LOCUS       DASDYO010000001        83437 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.001, whole genome shotgun sequence.
ACCESSION   DASDYO010000001 DASDYO010000000
VERSION     DASDYO010000001.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 83437)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 83437)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..83437
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.001"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            105..737
                     /locus_tag="U0290_000001"
     CDS             105..737
                     /locus_tag="U0290_000001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemolysin III family protein"
                     /protein_id="HEM2300072.1"
                     /translation="MNVTSYNWKEEVANAITHGIGFILSIPALVLLIIFAAGKDNPLY
                     LTSFLIYGISLMLLYICSTLLHSFKPCKARTVFNIMDHAAIYVLIAGSYTPFVLITIQ
                     GTLGWTLFGVIWGLAIAGIIYKIFMTGKLKLLSTSVYLLMGWMVMFAIKPLYAGLTPT
                     GFWLLATGGIMFTVGAVFYSIPRVPYMHAIWHLFVIAGTAFMYFCILFYV"
     gene            859..1476
                     /locus_tag="U0290_000002"
     CDS             859..1476
                     /locus_tag="U0290_000002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2300073.1"
                     /translation="MIPIELSPRQHQIVAYVRANEPATGDSIAAHLKLTRATIRADLS
                     ILTMTGILDARPKVGYFYSGLETNPIHFDEIRQLKVADIMTQPFFAKKETSVYDAIVM
                     LFMEDIGSLYVVDEDLLVGLVSRKDLLKGALADADTKATPIATIMTRMPNLVTVTKND
                     TVLHAAEQLVFHQIDSLPVLENTKVVGKISKTRITALFVDTIKKV"
     gene            1489..2301
                     /locus_tag="U0290_000003"
     CDS             1489..2301
                     /locus_tag="U0290_000003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEM2300074.1"
                     /translation="MENPVIIYVISDAIGETAQHIIRAVTAQFSLNKPADIRRHAFIR
                     DESALLETLEEAKAADGIVVQTLVQAKLAEYATNFCVQNNIPNVDLLHTLTAAVEAKT
                     GLKSKQDPGNMRRLDSNYFDRIAAIEFAVKYDDCKDPRGLLDADIVLVGVSRTSKTPL
                     SSFLANQNWKVANVPLVPEIPIPAELFQIPAERIIGLTTTPEKLAQIRKVRLKSIGLD
                     EASSYSSEKRILEELEYGYDTFKKLGCQVIHVEDKAIEETAALITEIITSYH"
     gene            2320..4959
                     /gene="ppdK"
                     /locus_tag="U0290_000004"
     CDS             2320..4959
                     /gene="ppdK"
                     /locus_tag="U0290_000004"
                     /EC_number="2.7.9.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate, phosphate dikinase"
                     /protein_id="HEM2300075.1"
                     /translation="MRKFVYQFSEGSKEMKNILGGKGANLAEMTNIGLPVPPGFIIST
                     DACNDYTANNKHLSEAIFEEVKIHLAELEKQTGKIFGFAENPLLVSVRSGAPFSMPGM
                     MDTVLNLGLNDQAAEGLANLTGDARSAYDSYRRFIQMFGDVVFEIPSYQFEQALSRIK
                     KANNYRLDTELTATDLSNLIDAYKLIFSQATGIDFPQDPLEQLRLAIIAVFDSWMNPR
                     AVIYRRLHDIDASFGTAVNIQAMVFGNTGETSGTGITFTRNPSTGEKKVFGEFLLNAQ
                     GEDVVAGIRTPEPISALEERMPTVYKELLQTCELLENHYLDMQDIEFTIEKGKLYVLQ
                     TRSGKRTAKAAIQAAIDFVHEGKITRQEAIMRVETKQLNQLLHPTFLESALKNGQVIA
                     TGLPASPGAATGQIFFEAKEAVQAAERGIPVILVRNETSPEDIEGMARSNAILTAHGG
                     MTSHAAVVARGMGKCCIAGCAELTINEKDKTIILPTGDTLHEGDALSLDGSSGKVYLG
                     EIALREAKIGGYFDELMAWADAEKRLMIRVNADTPADFKKALLFGAEGIGLCRTEHMF
                     FDEKRIPYVRQMILAESLNERESVLAILKEMQKADFNELFRIADGRSVNIRLLDPPLH
                     EFLPTMKQEIEQLAGAMNRTVPQITNRINGLREANPMLGHRGCRLAITFPEIYRMQAE
                     AIIESAIIVHNEGIDVHPEIMIPLIATKNELSYIKKELQQAVQAIFDREQVLIPYDIG
                     TMIEIPRACVTAAEIAEEAAFFSFGTNDLTQLTYGFSRDDATKFLADYYEKDILPKDP
                     FVSIDKNGVGALVEMAVTRGRMTSEHLKMGVCGEHGGDPESIQFFHQLGLSYVSCSPY
                     RVPIARLAAAQAALAEKQLVPTI"
     gene            complement(5009..5386)
                     /locus_tag="U0290_000005"
     CDS             complement(5009..5386)
                     /locus_tag="U0290_000005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2300076.1"
                     /translation="MVEKIGQVMLYVENQAAVRDFWVEKLDFVVVSEEVVNGEIQWIE
                     IAPTKGVETTFVLQNKKKVAEMNPEMNLGTPSILLFGNNVAELYEEYKDKGITVGDLV
                     DLPMGRVFNFSDNEGNYFAICEK"
     gene            complement(5390..6373)
                     /locus_tag="U0290_000006"
     CDS             complement(5390..6373)
                     /locus_tag="U0290_000006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HEM2300077.1"
                     /translation="MRIGMRTVKTAIAATLAIILAEWLHLEYAVSAGIIAILSVQNTK
                     KGSLQLAIQRVYSTVLALSIAAVFFMLIGYNAVSFGLYLLIFIPLAVRLHVADGIVVS
                     SVLVSHILLEQSLSFFWFKNELLLMAVGAGIAIILNLYMPKMEDELKRSQQKIEAIMR
                     QILTEMTQGLRNQSEYHDEFGLLNQLKGTLDYAQEKAARNLDNQFFASSHYYSQYVDM
                     RLVQYRILTQMKRHLVAFDHSSEQSMALAEITEKTAQTLDEHNTAEDLVAEITKMVHE
                     FRSSKLPETRAEFENRAILFQFMNDLRYLLEMKRDFYAEFGLKEKEMTRGR"
     gene            complement(6467..7090)
                     /locus_tag="U0290_000007"
     CDS             complement(6467..7090)
                     /locus_tag="U0290_000007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEM2300078.1"
                     /translation="METWITSIMADFGYIGIFVLIMVENLFPPIPSEIILTFGGFMTT
                     VTSLNVVMVIIVATLGSVVGAILLYKVASYFGKERLTKIVLKYGRILRLKESDIERAE
                     SFFLKYGSWAVFLCRMIPLIRSLISIPAGMTKMKMSRFLILTTAGSLLWNTVLIGLGA
                     VLGESWNEIVVFMDSFSTIIYSVIAILVVVGLGFFFRARFKKTLDEE"
     gene            complement(7227..8579)
                     /locus_tag="U0290_000008"
     CDS             complement(7227..8579)
                     /locus_tag="U0290_000008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trypsin-like peptidase domain-containing
                     protein"
                     /protein_id="HEM2300079.1"
                     /translation="MKKLRIFTLMLAFALFLLGGGIVAQAAEEAPIDEKIVGETVTND
                     GEEFIVDEISDLEDVNSTTGTLDTSDEVEVDLSGLTIENEEAVLTPGLKTIFGGDGRK
                     LVTNTTQYPYSTSAYLVMEFPNGKTYIGSGQLIGEDSVLTAAHCLYGKKDGGWAKKVT
                     VYPGYNGTKAPFGTAKARKMYVPKEWTKKEPSTEDYGVIKLDKNIGTKTGTMGLTTNT
                     SGAITISGYHGDKKGKLYTQTGNISQVTANNVFYRLDTTGGSSGSGVYNSKKQILAVN
                     AYEYLNGTGDNFGTRITKEKLNNIYTWAFDNNLSVSKQKGINYELHVQSKGWMGNVAN
                     SMTSGTVGLGLRAEAMKISLSGMPYSGDIQYRSHVQGSGWQGWLKNGEISGTRGQSKR
                     LEAFQVKLTGNIAKNYSVQYRAHVQNKGWQSWVKDGATAGTTGESLRIEAVQMRLVAK
                     "
     gene            complement(8834..10345)
                     /locus_tag="U0290_000009"
     CDS             complement(8834..10345)
                     /locus_tag="U0290_000009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomannomutase/phosphoglucomutase"
                     /protein_id="HEM2300080.1"
                     /translation="MNQSETKALEALQNGSDIRGIAIATEKYQITLTDERVEKIAYGF
                     AKWLKEEKKVEGQAKVAIGHDSRLSAERLKAALVKGLTFAGINVVDVGLATTPAMFMA
                     TQYEDYDCDAGIMITASHLPFMYNGLKLFTKSGGAEHEDIDYIVAHADKSFIENGLNL
                     GKVTKQDLLSTYAADLTDKIRAGITDAADKMKPLLGSHIIVDAGNGAGGFFAEKVLAE
                     LGADISGSQFLDPDGNFPNHIPNPDNEEAMASLKKAVLASGADLGVIFDTDVDRAAIM
                     DKNGESLNRNPLIAVISSIILEEKPGTTIVTDSTTSGHLQTFIEAKGGKQHRFKRGYR
                     NVINEALRLNADGTPSEIAIEVSGHAALKENYFLDDGAYLIAKILMTYATLRKNGKDL
                     PDLIADLREPAESEEIRLSITATDFKAYGKEVLADFLTFVEADPDMELEPVNQEGIRV
                     NTKGALGEGWFLLRMSLHEPVMPMNLESDEAGGIRKVKNRLAGFFASKAELKM"
     gene            complement(10414..11289)
                     /locus_tag="U0290_000010"
     CDS             complement(10414..11289)
                     /locus_tag="U0290_000010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEM2300081.1"
                     /translation="MLSKMEINKRALKENMALLACPICGEAFEFKEPQSFVCLEGHGF
                     DIAKPGYVHLLKQAHKTKYDQALFESRKKVIASGFFEKLIERVTEIIAEKKKEQLVLY
                     DAGCGEGSHLARVVSNLQATGVNVQAVGLDIAKEGVKQAARDYPGTSWTVADLANCPN
                     QAETADVILNILSPSNYVEFKRLLKKDGFLLKVVPEANYLRELREFIYVDEKSSYSNE
                     SVTSRLAEKLSVEHVERVTYKAPIAKELFADFLEMTPLGWHIEADKKSELLGNPPEEL
                     TVDLQIIIANRAHLL"
     gene            complement(11342..11824)
                     /locus_tag="U0290_000011"
     CDS             complement(11342..11824)
                     /locus_tag="U0290_000011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEM2300082.1"
                     /translation="MIIFVWAQDRAGNIGKDNKMPWHLPGDLQFFKKTTTGKTLVMGR
                     KTYESLGKALPNRKTIVLTRDQGLKLDDAEILHSKEAVLALAETGEPIYIVGGAEIYR
                     LFMDVADQLIVTKIDAEFEADTAFPEVDWENFSEVAKEFHEKDEKNKYNYTFYTYERN
                     "
     gene            complement(11840..12784)
                     /locus_tag="U0290_000012"
     CDS             complement(11840..12784)
                     /locus_tag="U0290_000012"
                     /EC_number="2.1.1.45"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidylate synthase"
                     /protein_id="HEM2300083.1"
                     /translation="MKQYLDLEKYVLENGTQKGDRTGTGTISTFGYQMRFDLQEGFPI
                     MTTKRVPFKLVVSELLWFLHGDTNIRYLLQHNNNIWNEWAFERFVKSDDYKGEDMTDF
                     GLRAERDSAFKEVYQAEMEKFKARILEDEAFANKYGELGNIYGKQWREWKTSQGETID
                     QLADLIEMIKTNPNSRRLIVSAWNPEDIPNMALPPCHSLFQFYVADGKLSCQLYQRSA
                     DIFLGVPFNIASYALLTHLIAREVGLEVGEFIHTMGDAHLYNNHIEQVKEQLSRTPHK
                     LPKLVLSDKPATIFDFDVADISLDGYNPDPAIKAPISV"
     gene            complement(12797..14689)
                     /locus_tag="U0290_000013"
     CDS             complement(12797..14689)
                     /locus_tag="U0290_000013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM2300084.1"
                     /translation="MKQLKVENLTKTYGGKSLFENISLTITEGERIGLIGVNGTGKST
                     LLQIISGSESGDKGTVTKAKDYTIGYLAQDPEFNEEDTVLSAVFDGDTAALRAMRKYE
                     EVLLAMSLDAENTKLHDAYTAASQEMDASAAWDMNTEAKTILERLGITDLTAKISELS
                     GGQRKRVGLAQVLIETPDLLILDEPTNHLDFQSIRWLEEYLNRFKGAVLLVTHDRYFL
                     DRVTNHMVELDRGSAYRYVGNYEKFMESKAIRMENEVRESEKNKNLYRKELAWMRRGP
                     QGRATKQNARQDRFHDLEKKVKTKTDDSELAIDFVTSRLGKDVFELKNLEKRFDEKQV
                     LQDFSLIIQPGERLGITGNNGTGKSTLLNMLAGKLAPDAGEVVTGQTVQIGYYTQQNE
                     EMDPDMRMIAYLQEAGEQVTTSGGEVISVSAMLERFLFPPNSHGKKIGSLSGGEKRRL
                     FLLRILMERPNVLLLDEPTNDLDTQTLTVLEDYLESFNGTVITVSHDRYFLDKVVNKL
                     LVFRAIGEVEIFYGEYSDYLKELEAKAKPAKSMKKMANTSVEKAAPEKKEKVKLTYQE
                     QLEWDGIEDAISELEQTIESLNETLEQTGADFTKAAEISELITAKETELEQMMERWEF
                     LSQYAE"
     gene            complement(14809..16491)
                     /locus_tag="U0290_000014"
     CDS             complement(14809..16491)
                     /locus_tag="U0290_000014"
                     /EC_number="6.3.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009928213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate--tetrahydrofolate ligase"
                     /protein_id="HEM2300085.1"
                     /translation="MSNKVKSDIEIASKAEILPVTTIAEHLGLDADALELYGKYKAKL
                     SYDTIHSLKDKEPGKLVLVTAINPTPAGEGKSTVTVGLGDALSKKDKKTVIALREPSL
                     GPTMGIKGGATGGGYAQVIPMEDINLHFTGDFHAITAANNALSAFIDNHMQQGNDLDI
                     DGRRIVWKRVVDLNDRALRKVVVGLGGPIQGVPREDGFDITVASEIMAIICLASDLKD
                     LKKRLSEIVIGYNYKKEPITVGEMGYEGALTLLLKDALKPNLVQTLEHTPAIVHGGPF
                     ANIAHGCNSVSATSTALRLGEYVVTEAGFGADLGAEKFLDIKVPALGKAPDCVVIVAT
                     IRALKMHGGALKTELSEENVDALAKGFTNLQKHTESIQTFGIPYVVAINKFITDSDAE
                     VAKLEALCKEHGIPFSLTEVWEKGGDGGLELADKVIAAVESGEADYKRIYDDAWSMEE
                     KLEAIVTKVYGGIGVELSSKAQKQIVEFKKYGWDRYPICMAKTQYSLSDDPTLLGRPT
                     DFVIHIREFIPKLGAGFVVALTGDVMTMPGLPKKPAALNMDVDENGNAQGLF"
     gene            complement(16649..17077)
                     /gene="mntR"
                     /locus_tag="U0290_000015"
     CDS             complement(16649..17077)
                     /gene="mntR"
                     /locus_tag="U0290_000015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator MntR"
                     /protein_id="HEM2300086.1"
                     /translation="MPTPSMEDYIEKIYSLIETKGYARVSDIADELFVHPSSVTKMVQ
                     KLDKDEYLIYEKYRGLILTPKGTQMGKRLLERHALLESFLSIIGVDPSHIYHDVEGIE
                     HHLSWNSIDRIGDVVQFFENHPDALKTLKAMETTKPETKE"
     gene            17442..17642
                     /gene="cspD"
                     /locus_tag="U0290_000016"
     CDS             17442..17642
                     /gene="cspD"
                     /locus_tag="U0290_000016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein CspD"
                     /protein_id="HEM2300087.1"
                     /translation="MQNGKVKWFNNEKGYGFIESDGGEDIFVHFTAIQGDGYKSLEEG
                     QAVTFEVVEGNRGAQAANVEKA"
     gene            17766..18167
                     /locus_tag="U0290_000017"
     CDS             17766..18167
                     /locus_tag="U0290_000017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HI family protein"
                     /protein_id="HEM2300088.1"
                     /translation="MEVFVDGASAGNPGPSGAGIVLKAEGIYEQFAIPLAVMTNHEAE
                     FIAIKLGLEEAIKKQATLIRLYSDSKVAIEAIHKRHAKNPLFKPHLEAILEMADSFEL
                     FFAEWRNVSQNKQADQLARQAIKKQKQPGVK"
     gene            complement(18186..19058)
                     /locus_tag="U0290_000018"
     CDS             complement(18186..19058)
                     /locus_tag="U0290_000018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-3' exonuclease"
                     /protein_id="HEM2300089.1"
                     /translation="MTENRENLLVVDGMALLFRAFYATAVSKQFMFNQHGIPTNGVQG
                     FMRHMFAAIRQSNPTHTLICWDMGSQTFRNELYDGYKTGRTAPPEEMIPQFDLAKEVA
                     AGFGFVNLGVPGFEADDCIGTITVQASNTIATTVLSGDKDLLQLIAPTNDVWIMQKGY
                     GNYKRYDEATFFEEMGISPRQFIDVKALMGDTSDGYPGVRGIGEKTAIKLIQEFESIE
                     GVLNNLDKLKPAQQTKIQEDLAMLELSQKLARIHTEVPLEIDLPSLKYDGFREDAFAV
                     VEKYGLKTLTRDIE"
     gene            complement(19136..19405)
                     /gene="rpsN"
                     /locus_tag="U0290_000019"
     CDS             complement(19136..19405)
                     /gene="rpsN"
                     /locus_tag="U0290_000019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S14"
                     /protein_id="HEM2300090.1"
                     /translation="MAKKSKVAKHERQQALVEKYAELRRTLKAEGRYDELRKLPRDSS
                     PSRLHNRCELTGRPHGYMRKFGMSRIRFRELAHQGQLPGVTKASW"
     gene            complement(19528..20586)
                     /gene="chiA"
                     /locus_tag="U0290_000020"
     CDS             complement(19528..20586)
                     /gene="chiA"
                     /locus_tag="U0290_000020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitinase ChiA"
                     /protein_id="HEM2300091.1"
                     /translation="MNGKQVMVGGLSLLLVGAGLGAFGSTAQAATDDASVMPDISNKQ
                     VLVGYWHSWKSSGNDGYQQGTSADIALKDTPKAYNVVDVSFMKGDGVNRIPTFKPVGI
                     NDSDFRAQVGALNKEGRAVLLALGGADGHVELKAGDEEAFANEIIRQVETYGFDGLDI
                     DLEQSAITAGDNKTVIPAALKIVKDHYKAEGKNFLITMAPEFPYLKPGSAYESYLTSL
                     ANYYDYIAPQLYNQGGDGVWVDETNQWIAQNNDTLKESFLYYMADSFINGTRGYLKIP
                     ANKFVFGLPANVDAAATGYVKDPQIVKNVFTRLQAKGTPVKGIMTWSVNWDAGKNKAG
                     VPYSNGFSNAYGPIVGTK"
     gene            complement(20778..22085)
                     /locus_tag="U0290_000021"
     CDS             complement(20778..22085)
                     /locus_tag="U0290_000021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine permease"
                     /protein_id="HEM2300092.1"
                     /translation="MLGKGKIAALGFQHVLAMYAGAVIVPLLIGGALGFNGEEMTYLV
                     SIDIFMCGIATLLQLTVNRFFGIGLPVVLGCAVQAIAPIILIGQDMGIGAIYGSIIVS
                     GLFVLLIAPFFSKVVRFFPPVVTGSVVTVIGLTLIPVAINNLAGGEGAKDFGSMYNLG
                     LGFGTLLLIILVYRFGQGFSKAIAVLIGLVGGSLFAALYKGISLGPVSEASWFHMPKP
                     FYFGTPTFEWPAIITMILIALVSMVESTGVYFALSDITERKLTQKDLTRGYRAEGLAI
                     MLGGVFNTFPYTAYSQNVGLVQLSGIKTRKVIYAAAGFLIVLGLIPKIGAVTTIIPTP
                     VLGGAMVAMFGMVVAQGIKMLGKVNFTSQENLLIIACAVGVGLGVTVVPDLFNAFPSF
                     VRLFTSNGIVAGSVTAITLNIIFNMIPHRKDKKVADPEPQHAK"
     gene            complement(22092..22670)
                     /locus_tag="U0290_000022"
     CDS             complement(22092..22670)
                     /locus_tag="U0290_000022"
                     /EC_number="2.4.2.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="xanthine phosphoribosyltransferase"
                     /protein_id="HEM2300093.1"
                     /translation="MKLLEEFIQEKGTVLPGNVLKVDAFLNHQIDPVLMQAMGNEFAK
                     RFQDLGITKIVTIESSGIAPAVFAGLALSVPVVFARKKKSVTLTDNLFTSTVYSYTKK
                     ESNDISVSKQFLTADDTILVIDDFLANGQAALGLLEIAEHAGAKVAGIGIVIEKSFQQ
                     GRELLNKTGIPVYSLARIASLENEEILFLEEE"
     regulatory      complement(22752..22852)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00167"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="purine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="guanine and/or adenine"
                     /db_xref="RFAM:RF00167"
     gene            complement(22898..24406)
                     /locus_tag="U0290_000023"
     CDS             complement(22898..24406)
                     /locus_tag="U0290_000023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxypeptidase M32"
                     /protein_id="HEM2300094.1"
                     /translation="MVETLEEEFLAYIKKMEALEEALALVYWDLRTGAPSKGMEGRSD
                     VIGVLSEEIFNMQTSEEMAAFIAGLNLDKENLSEITLKTLEESQKKYDLNKKIPSKEY
                     AEYTKLVAQAETAWTTAREQNDFAAFEPFLTKILEMKRKFVEYWGYEENKYDTLLDQY
                     EPGVTVSVLDSVFEKVRDGIMAIREKIANEGVKPDATILNTKISEAKQKEFSIRILNK
                     MGFDFEAGRLDETVHPFATGLNTGDVRITTRYNENDFKMAVFGTIHEGGHAIYEQNFD
                     AALVGTPLANGASMGIHESQSLFYEIIIGSSLAFWKSNYADFQAITKPAFDHVTLEDF
                     YRAVNISESSLIRIEADTLTYPLHIMIRYELEKALINGELEVKDLPKAWGDKYEEYLG
                     IRPDNDTNGVLQDIHWAGGDFGYFPSYALGLMYAAQFFNQMQKEIPNIDAIIASDDYS
                     ELKTWLTEHVHKFGKTKKPLEILTDTTGEGLNPTYLLDLLEKRYAYVYQFNK"
     gene            complement(24426..25574)
                     /locus_tag="U0290_000024"
     CDS             complement(24426..25574)
                     /locus_tag="U0290_000024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent RNA methyltransferase"
                     /protein_id="HEM2300095.1"
                     /translation="MKSFQLVATAASGLEAIVGKEVARLGYDPKVENGKVYFEGDLSA
                     IARANLWLRVADRVKIVVGVFKATTFDELFEKTKALPWEDYLPLDAQFPVAGKSVKST
                     LYSVPDCQAIVKKAIVNRVSEKYRRSGRLMETGALFKLEVSILKDEVTLTIDTSGAGL
                     HKRGYRLAQGSAPIKETMAAALVLLTSWHPDRPFYDPVCGSGTIPIEAALIGQNIAPG
                     FNREFVSETWDWMPKQVWADARQEAEDLANYDQPLNIIGGDIDARLIEIAKQNAVEAG
                     LGDLITFRQLQVADFQTEDEYGVVVANPPYGERLEDEEAVRQLYREMGIVYKRMPTWS
                     VYVLTSYELFEEVYGKKATKKRKLYNGYLRTDLYQYWGPRKPRPKKED"
     gene            complement(25736..26117)
                     /gene="rnpB"
                     /locus_tag="U0290_000025"
     ncRNA           complement(25736..26117)
                     /ncRNA_class="RNase_P_RNA"
                     /gene="rnpB"
                     /locus_tag="U0290_000025"
                     /product="RNase P RNA component class B"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00011"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00011"
     gene            complement(26154..26495)
                     /gene="gpsB"
                     /locus_tag="U0290_000026"
     CDS             complement(26154..26495)
                     /gene="gpsB"
                     /locus_tag="U0290_000026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division regulator GpsB"
                     /protein_id="HEM2300096.1"
                     /translation="MTSEQFEYHLTGKEILEKEFKTGLRGYSPEDVDEFLDMVIKDYS
                     TFTQEIEALQAENIRLVQELDNAPLRTSTQPAPTFQAAAQPAGTTNFDILKRLSNLEK
                     HVFGNKLDDNE"
     gene            complement(26627..27172)
                     /locus_tag="U0290_000027"
     CDS             complement(26627..27172)
                     /locus_tag="U0290_000027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1273 domain-containing protein"
                     /protein_id="HEM2300097.1"
                     /translation="MKSIAVTGYKNFELGIFKKDADEAVYIKETIKRHLLPLVEDGLE
                     WVIISGQLGIELWAGDVVAELKADYPIKLAILEPFEKQSANWNEANQLWASEVLEKAD
                     YHAFITKRPYESPAQFAARDGFIIDNTDGALLVYDLEKEGSPKFFYDRAIQAKEQSNY
                     YIDCIDFYALQEVVEDMNQTF"
     gene            complement(27169..27534)
                     /locus_tag="U0290_000028"
     CDS             complement(27169..27534)
                     /locus_tag="U0290_000028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YppE family protein"
                     /protein_id="HEM2300098.1"
                     /translation="MELLNRTEKLLLQNEKNWELYLSNREEAKPFDFYKDMKPFVDEA
                     KNSADAFLELAIPWVNKERPPYLGELQLRQACDNVQMTAVSAFNGKSFYKHFLDHYQS
                     TKYTLTRVRDFLKRKEELM"
     gene            27781..28386
                     /gene="recU"
                     /locus_tag="U0290_000029"
     CDS             27781..28386
                     /gene="recU"
                     /locus_tag="U0290_000029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RecU"
                     /protein_id="HEM2300099.1"
                     /translation="MAIGYPNGKKYAASHEVLPQQKRKAPVTYGKRGMSLEDDLNDTI
                     AYYLTHEIAVIHKKPTPVQIVSVDYPKRSSAKIKEAYFKTPSTTDYNGVYKGKYVDFE
                     AKETQNTTSFPLSNFHDHQMTHMANVLKQDGIVFVIIAFQKLGETHFIPFEKFYPFWE
                     RMQSGGRKSVTIAEIQDVSDQIPYGLNPRLDFLQSIDKLYF"
     gene            28418..30901
                     /locus_tag="U0290_000030"
     CDS             28418..30901
                     /locus_tag="U0290_000030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEM2300100.1"
                     /translation="MADKPQTRSQYRNKQSGGSKKKSQKRGKRVVANIFKTIFFVGLF
                     LAFFGIAAGATVFYDYAKDAPKLTDSKLRDPLSSKLLDKDGKVFAEVGTERREYIEYK
                     DIPETLKNAILTTEDARFYEHDGIDPIRLGGAVIANLTDGFGAEGASTLSQQIIKMSY
                     LDYTNKTLARKAQEAWLALQLEEKYSKNDILEIYVNKVYMSDRVHGMQTASEHYFGKN
                     LKDLTLAQTALLAGMPQSPNNYNPYEHPEAAKKRRDQVLTNMYTHDKITKEEMTEAQK
                     TSITTGLRSKKDREDKIYKYDSYVTQVLSEIPKEYDVYRDGLTIHTALDRDAQEYTEK
                     MLNTNEIVNFTDDEMQAGIVLQDTKTGRVQAIGGGRKQKVTRGYNYATQVKRSVGSTM
                     KPIADYGPAFEYLDWSTAHILEDEPYTYSGGTPINNWDFAYKGPISVRQALYQSRNIP
                     ALKTLQAVGLDKSEEFVNKLGITYDEGQNVESNAIGANSSNPMQMAGAYAAFGNKGIY
                     NKPHTVTKIVLSDGQTEIDTEPQSTVAMKESTAYMVSDVLKDVLSIGTGTSAAVPGVP
                     AAGKTGTTNIPPEFTSKYYYPSGAARDSWFAGYTTNYSIAVWTGYDDKKKYVSASEQK
                     IAQRMFSKLMAHASAGKTTADFKMPSNVVSVPILKGSNPIARAAAGTASDKVSYELFL
                     SGTAPTKTASTPEDEKKKAEEAAKKKKAEEDKKKTDEEKKKEEEAKKKAEEEAKKKAE
                     EEAKNLTAPAGLRASYNAGSKQINVSWSAVDGATYEVTVNGSTTTVSSTSVSVSGGNP
                     GDTVSINVVAVKDGNRSPASSTTVKIPDS"
     gene            complement(30944..31435)
                     /locus_tag="U0290_000031"
     CDS             complement(30944..31435)
                     /locus_tag="U0290_000031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300101.1"
                     /translation="MAEFKYAVELTHPDFPAPDVILEEYDPESIYVSGLPFWQEQQFF
                     TKGGGVIPWKNETERACRKLAKHMTNLAESMEADLKVHKKPSPVTVRDALGIFLSILF
                     WSNHRPVQLDNLMDQIKTLETKPLNLDERLEYVLKRGNTYLGFRQLNELMLEQRKLIA
                     KRS"
     gene            complement(31428..32087)
                     /gene="nth"
                     /locus_tag="U0290_000032"
     CDS             complement(31428..32087)
                     /gene="nth"
                     /locus_tag="U0290_000032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III"
                     /protein_id="HEM2300102.1"
                     /translation="MLSNKQTVLCIEEMAKMFPAAHCELVHKNTFELLVAVVLSAQCT
                     DVLVNRVTASLFEKYHSPEDYLAVPLEELMEDIRSIGLYRNKAKNIQGLSEKILIEFN
                     GEVPKTHAELESLPGVGRKTANVVLSVGFGIPAIAVDTHVERISKRLGICRWKDSVVE
                     VEETLKRKLPKELWSDAHHYMIFFGRYHCKARNPECPTCPLLYLCREGKKQAKVRGFD
                     G"
     gene            complement(32098..32817)
                     /locus_tag="U0290_000033"
     CDS             complement(32098..32817)
                     /locus_tag="U0290_000033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DnaD domain-containing protein"
                     /protein_id="HEM2300103.1"
                     /translation="MNPKILEKWMAEGQVTLPQVLVKNYATIGLNEVELVLLLQIQSF
                     AAEAEFFPSMEMLTNRTTLPLEETIKTMDSLLKKGVIAIEQSQDNSRMISEQYNLAPL
                     WGKLVALYENKEADSKHEKELEKQTSLYTLFEAEFGRPLSPMEAEMLSAWVEQDRTSP
                     DLIKEALKEAVISQKLNFRYIDRILLNWSKQGVKTIEDAKRVAEEFHQNGRTSQAINQ
                     TEVKKSAGSIPLYDWLEKRKG"
     gene            complement(32967..34259)
                     /gene="asnS"
                     /locus_tag="U0290_000034"
     CDS             complement(32967..34259)
                     /gene="asnS"
                     /locus_tag="U0290_000034"
                     /EC_number="6.1.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine--tRNA ligase"
                     /protein_id="HEM2300104.1"
                     /translation="MKITINQASEFVGKEVTIGAWLANKRSSGKIAFLQLRDGTGFMQ
                     GVVVKAEVGDDIFATAKALTQETSLYVTGTINEDTRSPFGYEMAVSGVEVISESHDYP
                     ITPKEHGTEFLMDHRHLWLRSNRQHAIMKIRNEIIRASYEFFNKEGFLKIDPPILTGS
                     APEGTTELFHTKYFDEDAFLSQSGQLYMEAAAMAFGKVFSFGPTFRAEKSKTRRHLIE
                     FWMIEPEMAFYKLEDSLQVQENYVAFLVKAVLDNCRLELDRLGRDVSHLEKMVAPFPR
                     ITYTEAIERLHELGFDDIVWGDDFGAPHETAIADSFEKPVFITHYPKAIKPFYMPEDP
                     ENDQVVLCADMIAPEGYGEIIGGSERIHDLETLQARMEDFDLDQEAYSWYLDLARYGS
                     VPHSGFGLGLERTVAWISGTEHVRETIPFPRLLNRLYP"
     gene            complement(34273..35454)
                     /locus_tag="U0290_000035"
     CDS             complement(34273..35454)
                     /locus_tag="U0290_000035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM2300105.1"
                     /translation="MDLPLSKRVKGVAPSPTLAITAKAKQMKQEGIDVIGLGAGEPDF
                     NTPQNIIDAAIESMNKGFTKYTPSSGIIELKQAIVDKLQKDQFLNYETNQIFVGTGAK
                     HVLYSAFQTILDPGDEVIIPVPYWVTYPEQVKLAGGIPVFVETGFDADFKISAANFEK
                     AITKKTKAIVLNSPNNPSGMCYTKEELIAIGEVAEKHQIYILSDEIYEKLYYGNKADL
                     VSIASLSDRLYDLTIVINGVSKAYSMTGWRIGYAAANKEIIAGMSKLADHLTSNPTAN
                     AQYAALEAYVGSQEVPEKMYKAFEERMERFYPELSSIPGFKPKKPDGAFYFFIEVKEA
                     AHKKGFQDVDAFVAALLEEAKVAVIPGSGFGMPDYIRLSYATNPDLFQEAINRIKSFM
                     K"
     gene            complement(35477..36061)
                     /locus_tag="U0290_000036"
     CDS             complement(35477..36061)
                     /locus_tag="U0290_000036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5590 domain-containing protein"
                     /protein_id="HEM2300106.1"
                     /translation="MYLCENENAYRRRNSGNLEIEMSEIILRNRKPKRKIGKWIAIIL
                     GIIIVLVVAAFLYFRYAEKPVTNAETEALDRISGQVDLKTTDQFYLYNGPKEVYYVLT
                     GKNSKNKNIIVWVPKKKSDKVYVKFASDGITEQQARDKVTKEKNPKKILHVNLGMEKE
                     TPIWEVAYLDKNDKLNYFDINFETGEWYREIENL"
     gene            complement(36106..38892)
                     /gene="dinG"
                     /locus_tag="U0290_000037"
     CDS             complement(36106..38892)
                     /gene="dinG"
                     /locus_tag="U0290_000037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase DinG"
                     /protein_id="HEM2300107.1"
                     /translation="MKQKRYIVVDLETTGNQASREDRIIQFAACFVESGKRLETYTTF
                     LNPEKPIPAFIQELTGISPKDVKNAPLFEDVAPIIANLLEDTIFVAHNVSFDWTFLER
                     EMTRAGISLGKMKKLDTVELARIMYPGIDSYKLQDLSDEFNLGHDKPHRADSDAEVTA
                     DLLLLLLEKLENLPLPVIRQMTTISGSLKSYLPELLFEIEMRKERENKPLDPAFVEHR
                     GLVIRKKEVEKPTYSRADLLEFPETDEAKMALFKKAGAPLYARSGQFEMMNLVFQAMK
                     SGKHALIEAGTGIGKSLGYFLPAIYQAKQAELPVVISTYTNLLQAQLFEKDVPLLTKL
                     TGFKVKASLLKGRDHYLNLFKFEQLLQEVDTQYDVVVTKLKLLVWLTETTTGDIDEVN
                     LSSGGELFWNRMKHTGWFLSEKHDPWLAHDFYKFNIKQAKNADLVIVNHALLLNDHFS
                     GRETLPKYAFAVIDEAHHFADSARMQGSFVLSYRKIKYFLNQLGSLEKYSLLTRLAMA
                     FPEADSLYDLDIAAMKLSDAVEEFFGLLKMQLNFARKNLQEVVLVENSEKDAWNDKVY
                     YAAEKVLHLLKESEKNMETLLEQGKQEENELGEAESAFLEEMYAFLLDWKNMVKQLEQ
                     MLHKKSPILTIYLQADKNHSISSIRLKAVLMEVEPTLGKEFFAKKESVIMTSATLTVK
                     GKFDYLRKSLGLEEEQIMEKRIPSPFDYKENARVMIPDDMPPIKDTPIERYTLELAKY
                     IRHIAVKTNGRMLVLFTASDMLQKTYYHMKNEKSLEEYVLLAQGVSAGSAARLTKQFQ
                     MFDKSILLGTTSFWEGIDIPGEDLSCLVIVRLPFAPMDDPYTKAQISLRKERGENAFQ
                     TYSLPEAVLRFKQGFGRLIRRESDRGIVFVFDNRVDTTKFGKAFLESIPSAPILKGKQ
                     ADLLEEVSEFFKEG"
     gene            complement(38989..39372)
                     /locus_tag="U0290_000038"
     CDS             complement(38989..39372)
                     /locus_tag="U0290_000038"
                     /EC_number="4.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate 1-decarboxylase"
                     /protein_id="HEM2300108.1"
                     /translation="MFRTMMNGKIHRATVTEANLNYVGSITIDSAILEAVDMLPNEKV
                     QIVNNNNGARIETYIIPGEPGSGVICLNGAAARHVQVGDVVIIMSYGMFTTEEAKTHE
                     PKIVVLDEKNHIEMILPEEKAHTTL"
     gene            complement(39376..40233)
                     /locus_tag="U0290_000039"
     CDS             complement(39376..40233)
                     /locus_tag="U0290_000039"
                     /EC_number="6.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantoate--beta-alanine ligase"
                     /protein_id="HEM2300109.1"
                     /translation="MLIIRNKQDLKEAILEQKKANKTIGYVPTMGFLHEGHMTLVSHA
                     RKETDFVVMSVFVNPTQFGPNEDFDAYPRDEAHDAKLAEEGGVDILFVPTVEEIYPTE
                     LATKLHVIKRVSVLDGADREGHFDGVVTVLTKLFHLVNPDNAYFGQKDAQQVAVVSGL
                     VEDYFFPINLRIIATVREADGLAKSSRNVYLTEKERKEAPVIHEALQLGRELIESGET
                     NEAKIVQVMTDKINEQPSHENIAYLALYSYPEFTPVTDWTKGIIIAAAVKYSKARLID
                     NELINVKRR"
     gene            complement(40237..41070)
                     /gene="panB"
                     /locus_tag="U0290_000040"
     CDS             complement(40237..41070)
                     /gene="panB"
                     /locus_tag="U0290_000040"
                     /EC_number="2.1.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-methyl-2-oxobutanoate
                     hydroxymethyltransferase"
                     /protein_id="HEM2300110.1"
                     /translation="MKRPVDFFAMKENGEKITMITAYDYPSAKNVEQAEADMILVGDS
                     LGMVVLGYDSTVPVTMDDMIHHTKAVKRGAPDTFVVTDMPFMTYHGSVDETIQNARKI
                     IQESGAHAVKLEGAGEVVNKIARLTEAGAPVVAHLGLTPQSVGLTGSYKVRAKSAQEA
                     QELMDNALAVEAAGAIALVLEAIPRQLAEKVSKALSIPTIGIGAGVETDGQVLVYHDI
                     IGYGISRRAKFVKAYADIDERIEPALASYVKEVKAATFPEVKHSFTMAEEDLKGLYGR
                     E"
     gene            complement(41237..41710)
                     /locus_tag="U0290_000041"
     CDS             complement(41237..41710)
                     /locus_tag="U0290_000041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM2300111.1"
                     /translation="MKKILLLLTSITVILTLGACGDNKKETEEKANQTEKESASFLTT
                     ISTKDFKQKMADKTTGFVYVGRPTCEDCQAFQPMLKKELKKRQPDQKMAYYNTDKASE
                     KSRDDMIALLEKMDIDSVPTMVYLKDGKVASTYAATDEPAKLTNWMNKVSGEVSE"
     gene            complement(41858..42835)
                     /locus_tag="U0290_000042"
     CDS             complement(41858..42835)
                     /locus_tag="U0290_000042"
                     /EC_number="6.3.4.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin--[acetyl-CoA-carboxylase] ligase"
                     /protein_id="HEM2300112.1"
                     /translation="MKNNREKLLALFTESDGTYLSGQEIADSLGCSRTAVWKQMEALR
                     KEGFEIEAVRNRGYRLSATAEQYTKDALLLGLETKFIGQHLEIHESVSSTQIIAHQQI
                     ESSPEGTVIVADEQTAGKGRLLRPWSSKKGEGIWMSVILKPQIPIQKVPQFTFIASLA
                     ITEAIENSTKLEPKIKWPNDIYIGKRKICGVLTEMQAEAETIHAVIIGMGINVNQQEF
                     PEEIKDKASSLKLELGESVSRKALLQEILTSLEKYYELFLDKGFAPIKLLWETKAIPF
                     GEKLTASTTKGKIHGQVKGISDEGVLLLQDALGEVHSIYSADILLDNEK"
     gene            complement(42825..44006)
                     /locus_tag="U0290_000043"
     CDS             complement(42825..44006)
                     /locus_tag="U0290_000043"
                     /EC_number="2.7.7.72"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA tRNA nucleotidyltransferase"
                     /protein_id="HEM2300113.1"
                     /translation="MNDVFLKALPVLQKLTTAGFEAYFVGGSVRDYLLNRTISDVDIA
                     TSAFPEEVKEIFQTSYDTGIAHGTVTVRENNEFYEVTTFRTEGTYEDFRRPSEVTFIR
                     SLEEDLKRRDFTMNAIAMDEHFALQDPFSGQLAIQNKEIKAVGKASERFHEDALRMMR
                     AVRFLSQLDFELDKETEKALESQIELLQHTSVERITVEWLKMMKGKAAKRAIELLLKV
                     KMETYLPGLKDEKSALSEFASWDWEKRTTEESIWLGLVVAVKPNNVNAFLKAWKLPNK
                     TIQLVNKAYQYALNMKETWLTEELYHAGKAVFSLVNELNVIRGQENNQHKVSQAYEAL
                     PIHSKKDLAITGADLLKWSGESAGPWVKETLDKVECGVLSNEINNEKIQIKRWLGYHE
                     E"
     gene            complement(44021..44425)
                     /gene="mgsA"
                     /locus_tag="U0290_000044"
     CDS             complement(44021..44425)
                     /gene="mgsA"
                     /locus_tag="U0290_000044"
                     /EC_number="4.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylglyoxal synthase"
                     /protein_id="HEM2300114.1"
                     /translation="MHIALIAHDEKKDLMVGFATAYKHLLEPHQLYATGTTGLRIIEA
                     TGLTVHRFKSGPLGGDQQIGARISENKMDLVIFLRDPLTAQPHEPDVTALIRLCDVYE
                     IPLATNIGTAEILIRGLGAGFLDWRDLRRNDE"
     gene            complement(44441..45232)
                     /locus_tag="U0290_000045"
     CDS             complement(44441..45232)
                     /locus_tag="U0290_000045"
                     /EC_number="1.17.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate reductase"
                     /protein_id="HEM2300115.1"
                     /translation="MRVAVSGFKGRMGHEVVKTVLREADLELVAVLDHEPKEKNINEI
                     VEFSSLDVPVFGNLSEMLEEIKPDCVVDFTTPKVGYSNTKTILEHGVRAVVGTTGFTP
                     EQISELRSIAESKKIGALIAPNFAVGAVLMMQFAQKAAKYFPNVEIIELHHDNKLDAP
                     SGTAVKTAEMMAETREFVKQGAADEVELIEGARGAEYEGMRIHSVRLPGLVAHQEVIF
                     GAEGQGLTIRHDSYDRISFMSGVALSVRKTKELETLIYGLENILD"
     gene            complement(45229..45564)
                     /locus_tag="U0290_000046"
     CDS             complement(45229..45564)
                     /locus_tag="U0290_000046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HEM2300116.1"
                     /translation="MAKTMAEIQKEVDDFIGGFEEGYFSPLAMMARITEETGELAREI
                     NHYYGEKPKKTSEPTKTVAEELGDCLFVLTCMANSLDIDMEKAHDTVMAKFKERDKDR
                     WTKKEEKAK"
     gene            45705..46571
                     /locus_tag="U0290_000047"
     CDS             45705..46571
                     /locus_tag="U0290_000047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM2300117.1"
                     /translation="MLKTLRTKNICFIMLGTAIYAFGLVNFNIANNLGEGGLAGVTLF
                     LLHFFQIDPAYSNLILNIPLFILGWRVLGNRSLIYTGIGTVSLSLFLWIFQRIPYTLD
                     LHSDLLLVALFAGGFSGIGLGLVFRYGGTTGGSDIIAKLLNHTKGISMGRTLFAIDAI
                     VLVASLSYLDVRQVMYTLVAVFIGSRVIDFVQEGAYAARGALIISKDNDAIASHVMLA
                     MNRGVTVLEGRGGFSKKDQDVLYIVVAKNEIIQLKNIVQAIDPHAFVSVSVVHDVMGE
                     GFTLDENKNPIY"
     gene            complement(46561..47667)
                     /locus_tag="U0290_000048"
     CDS             complement(46561..47667)
                     /locus_tag="U0290_000048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-binding oxidoreductase"
                     /protein_id="HEM2300118.1"
                     /translation="MQKIVIIGGGIVGASAAYLLSKENVQVTLIDSDEPGQATRAAAG
                     IICPWLSKRRNKYWYELAKNSAAFYKELAGTLEGDTGRNSGYKQVGVLALRKTEEKVT
                     ELFNLANERRLDAEVMGEIVKLSEEETKQKFPLVKPGFGSVYVSGAARVNGSLFCERL
                     LYAAKENGVKIKSGRAHFSTDGKVRVDGEDEHYDKLIIAAGAWLKELLDEASFHTEVL
                     AQKGQLLELDFSEFQTDEWPVILPPSAKSIVPFDNGKIIVGATHEKTAGFDTKPTVEG
                     KAEILTEVSQFMEGDLASKVAHVAVGTRPYTPDFAPLIGQLPGFESVFLANGLGASGL
                     TTGPYVGKLLADLALGNTVDLALENYEPSKYISR"
     gene            47987..49123
                     /locus_tag="U0290_000049"
     CDS             47987..49123
                     /locus_tag="U0290_000049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEM2300119.1"
                     /translation="MPNILDSLWNSMALFLSALFFHGMALRSIREKKPAWFQIKFSNE
                     IINYALGIYYGLLGVYFIIRGLPGTDSGIYTDMLLNILIVLHLFSSAGPATIALLLIV
                     AGKLFLGDALFANLIYAFLIIGFHFVCMEVAKLRLSSVQKVVLVKLSAIPLMLFYLHQ
                     KIHLLYTINDLPVWILYFLVSFFITFIIVSAAYYIDTSNKLIYDLQQSTILDPLTGLT
                     NFRHFEKAFEAAFNHATLKKSNLSVIIIDIDYFKRVNDTYGHLVGNGVLSTFSQMLLK
                     ISFPPNTLISRIGGEEFAIILPNINVSETEHLAEKIRRKVEKIDVPIVASGSVITISA
                     GIANYDGRNYPNPNELLNAADQALYNAKRNGRNQVHIRETEPVV"
     gene            49149..50276
                     /locus_tag="U0290_000050"
     CDS             49149..50276
                     /locus_tag="U0290_000050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEM2300120.1"
                     /translation="MFELVNSYIDSLALFLAILFIQGMSFRKIRQYRPNWFQNGGRRL
                     FLSILLGVYYGLAGIYFIYEGAYENNPVIYTNMRILILMVTSVFGGRVPLIFAYLVML
                     FGRISFDIASPVTSRYVILMTLIFAACLLVTFWKKQRFSRFVALIILNFPAILYYFVN
                     NFDEGRILQGFEIIEYFLLFFVTALLVFYACNYIDKSNLVIQNLTETAMTDSLTNLPN
                     MRFFTQQFGWIFAKSQKRKKSLSLFIIDIDHFKEINDFHGHQAGNTVLAQFSSILKNR
                     TFPPRTMFARIGGEEFAVLLQNVGTEQAALIADFFREEVERAKFPYNPASGKVTVSIG
                     VASASSNFSTTESLFEAADQALYQAKQNGRNQIAVHQGELE"
     gene            50273..51277
                     /locus_tag="U0290_000051"
     CDS             50273..51277
                     /locus_tag="U0290_000051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside transferase"
                     /protein_id="HEM2300121.1"
                     /translation="MKRFILIFILIILIGAGFFFFLRPEPKKTVSAPKETTPTSTSVQ
                     TYVKENYTAKNGLIVDYKNAQEPHYLAESIGLYMEYLVEVNDSKTFQEQVSHLEKNFI
                     TEDNFIKWEATDATTTNAIVDDFRITEALYQASEKFIFPSYKKMADKILANTKKYSAE
                     QGVPVDFYDFVHKKKADTLHLSYLNIQAMQQINYRDKAYLPIQTVNADPFFTEVFQNE
                     QFQYADPSEVNMIDQMLIAMAYFDENGDVEPNFDNFLQTELASKGKVYARYQRETKNP
                     SSENESTAVYAFLTQYFNKTNQAKNGKITKELLEKMDTSNPETTHFFDYINKEITLKK
                     "
     gene            51296..51979
                     /locus_tag="U0290_000052"
     CDS             51296..51979
                     /locus_tag="U0290_000052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEM2300122.1"
                     /translation="MKKPTVREIIDQNHFDTIYEPIVVVENTQIFGYESLTRLKTDHW
                     NAISDFIEEAEQDGLQKAFELLTLHNAVKRFNKSGDTPLFVNISYDTFLENQEELHDT
                     LLDNGKIVFEFLETSKLPQERMNDLEKQLLQFQKKHETKFAIDDFGSGYADLHRVFAH
                     HSDFVKTDRLLLRDLFESDGKKIFFEQLHNYVKKHHKSLIVEGVETKEQLEFLQEIGI
                     PYAQGYYFH"
     gene            52090..53733
                     /locus_tag="U0290_000053"
     CDS             52090..53733
                     /locus_tag="U0290_000053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent malic enzyme"
                     /protein_id="HEM2300123.1"
                     /translation="MTVKPGFDYMNNPLLNKGTAFSKEERASYQLDGLLPPIIETIEQ
                     QAVRIETQIENLETPLHKHQLLTNLYNENRTLYYYVVTKNVTDYLPIIYTPTIGDAVI
                     QYHKEYTAPDEALFIDAFAPEKLSASIKNYAKNNPNIDMIVITDGEGVLGIGDWGVNG
                     VKIAVGKLAVYTVAAGLAPDRVLPVVIDAGTNNETLLNDPLYLGNKRPRLSESEYDAF
                     IASFVNVMKEVFPKAILHWEDFGRANASRILHNYRDKICTFNDDIQGTGAMVVAAVLA
                     TIQVSKIPLSEQKIIIFGAGTAGIGIADQLSAQWMRETGLPFESAKKHFYLVDRNGLV
                     LDNMTDLTTGQKKYAHPSTEWSNVPTDTLENLMEAVHPTMLIGCSGVTGAFKESIVKK
                     MTQYTERPAILPLSNPTKLAEATASDLIQWTDGKALIVTGSPSKPVEYQHTTYEIGQA
                     NNALLYPGLGLGALVTRAKYITDGMLAAASMAVAEQISPNKAGAALLPHVRTLRETSR
                     AVAIAVANQAIKENIHQVELTNVTEAIEREMWQPIYKGV"
     gene            53736..54743
                     /locus_tag="U0290_000054"
     CDS             53736..54743
                     /locus_tag="U0290_000054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-lactamase family protein"
                     /protein_id="HEM2300124.1"
                     /translation="MFYKTKQSLDQLVQNGSTPGISYQIKTNYLEENNIMGLKSVFPE
                     AEILPRTTENIYDIASLTKVIATTTRILQLIEQQRFQLNDPIQMYLPDFRYNNVTILH
                     LLTHSSGLAQNIPNFSMNNREDVIRYVYATPQINIPGTVVTYADANFLLLGYLISKMD
                     GNYEKAIQNNILEPLSMTNTSFHPANKKQVIPTELDQTRGLIQGDVHDFKAWTAKSGT
                     GHAGLFSTLSDLSKFRDALMLQHGAPILSEKTWQLMQINHTPGLNRSRGLGWDLRGDS
                     VLYHTGFTGTFMVLDLKHQASLIVLSNRVHPSRANPNFVDKRDSIVDTFLEEVANTTE
                     V"
     gene            54976..57255
                     /gene="pflB"
                     /locus_tag="U0290_000055"
     CDS             54976..57255
                     /gene="pflB"
                     /locus_tag="U0290_000055"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HEM2300125.1"
                     /translation="MTKAWDGFKGTAWQENISVGQFVQDNYTPYDGDESFLEKSTPRT
                     TKLNEKINKLVEEMDAKGGVLDMDNAIVSNVASHKAGYVDQENEVIVGLQTDKPFKLA
                     FMPNGGLRTAEQCLTDNGYSIDQELHDFYVKNRSTANDGIFRAYTDDIKRARHSHIVS
                     GLPDAYSRGRIIGLYQKPALYGVDRLIAEKQQDLKKIAISSDENIRLREEIWLQIKAL
                     KDLIVLGNEYGLELGRPAENATEAVQWTYMGYLASIKQANGAASSFGRIPIFLDIYIQ
                     RDLEKGIITEFDAQELIEQLTLKLRMVRFARTDGYNELYASNPTFVTTSMAGMGADGR
                     HRVTKTDYRFLHCLDNLGNSAEPNLTVLWDARLPESFKEYCMKMSVKHSSIQYENDKL
                     MQEEGYGDMQCISCCVSPLNPEADKDKGETHNLQYFGARVNVLKCLLGAINGGKDDLH
                     KNQVFDVVEPITTEYLEYEEVLEKFDKSMDWLTDTYVDAMNIIHFMTDKYNYESMQMA
                     FLPSKVTANMGFGICGFANVVDSLSAIKHAKVKTIRDEDGFVYDYEVEGDFPRYGEND
                     DRADDIAVMVLKMFKDKLDSHKLYKDSEATVSVLTITSNVAYSKQCGNSPVHKGPVFD
                     ENGKIVKEPEFFSPGANPSNKAKGGFLDNLASLSKLPFHYANDGISLTIQGAPKMFGK
                     TTEEQHHNLVGILDGYFTKGGQHINLNVLNHDEVIEKIKAGIPVILRISGYCLNTKDL
                     NEEQKMELCQRMFHEKLIG"
     gene            complement(57303..58568)
                     /locus_tag="U0290_000056"
     CDS             complement(57303..58568)
                     /locus_tag="U0290_000056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2300126.1"
                     /translation="MDYDVIVIGGGPSGLMAAISAAEKNKRVLLIEKGPKLGRKLIMS
                     GGGRCNVTNRRPAEEIIKHIPGNGRFLYSAFHAFDNEDIIRFFERLGVALKEEDHGRM
                     FPVSNSARSVAEAMIQRMEKLGVKIYMQTAVKQVDYEDGHVKGVTLKDGQEISASAVI
                     VAVGGKSVPRTGSTGDGYAWAKKAGHTITELYPTEVPITSSEPFIKQKVLQGTSLRDV
                     SLSVLNAKGKPIITHQMDMIFTHFGVSGPAALRCSMFVLRELKKTGASTVKMRLDLFP
                     NVSAAELSKDVYKLLEENPKKALKNSLSSLLQEKMLLFLLEKADLDETADYKQVSPKK
                     IEQFIQLLKDFTFEVNGTLDFEKAFVTGGGVSVKEIKPKEMQSKLMEGLFFCGEILDI
                     NGYTGGYNITCALVTGHTAGAYAAEVSNA"
     gene            complement(58678..59361)
                     /locus_tag="U0290_000057"
     CDS             complement(58678..59361)
                     /locus_tag="U0290_000057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metallopeptidase"
                     /protein_id="HEM2300127.1"
                     /translation="MSFSQYIIYFIIVAAIPLWAQYRVKTTYAHYSKVGVANGLTGAE
                     VARHILDTNGLTNVPVHETKGILSDHYDPRKKAVFLSEANFRGRSIAGAAVAAHEVGH
                     AIQDQQDYAFMRFRSALVPVTMFSSNISWVFLIIGMLANVASFMLLGIILMAVGVLFQ
                     LITLPVEFDASKRALVQLESGGLVASSELPQAKKVLSAAAMTYVAAMAVAVLELLRLL
                     LIFTNMNRN"
     gene            complement(59448..60044)
                     /locus_tag="U0290_000058"
     CDS             complement(59448..60044)
                     /locus_tag="U0290_000058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1405 domain-containing protein"
                     /protein_id="HEM2300128.1"
                     /translation="MLYSLLANRAFLRLLFFGNLLGAIYGYIWYLPQLQMTEPRFWLF
                     VPDSPTAILFFTLALVAFLGKKHWPLMEALGFVCLVKYGLWAVGMNIFYMIDQGMLVW
                     GSVALILTHGFMAVEGILYAPFYRFRIGHFMIAAVWVFHNDVIDYVFGQMPIYMGLEK
                     YLPEIGYATFWLTVFVLWFVYDKTIKNKHLTLEFPHDE"
     gene            complement(60132..60677)
                     /locus_tag="U0290_000059"
     CDS             complement(60132..60677)
                     /locus_tag="U0290_000059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpiB family protein"
                     /protein_id="HEM2300129.1"
                     /translation="MKASISIDEKKDFIRWFLNKHQMKTREAMWVLNYIAGHDQIVKY
                     VHFVDNLEGCARGLSLSAHGVESEPFLFFKGNIMTTDPEKAFHDIRLNWDEELYVELH
                     FEEAMSSPEYALVREDNPFTAVKLADEEKEMADALIYQSVHQFSREKVLQQIDEALDT
                     RDEAAFHKLVRILQQMDTEKE"
     gene            complement(60713..61966)
                     /locus_tag="U0290_000060"
     CDS             complement(60713..61966)
                     /locus_tag="U0290_000060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEM2300130.1"
                     /translation="MELANKMLHALEHEDMALAKKYFDEVVQAGTDEEQYYLAEELFT
                     LGFLDETEDLYELLLAKYKDEGELLVRAAEVALEKDDIDSAQDYLEKVNKEDEAYIES
                     LLVLADLYQMQGLFEVSEQKLLEAKQMAPNEPIIDFALGEYYLSQARFASAVQSYQTA
                     VEAGLTIISNGAVSVYERIAEAFAASGAFEEALSYYERALEDKESVDTLFGMGLTAYQ
                     AKDYTKAIHALEHLREHDPSYTTLYSYLAKSYEENGEPEKAIAVLRDGLTQDEFNKEM
                     FLEAGKLAVTLRLPEEAEEFYRQAIVLDEEYSEAIMQLNKLLLAKEDYEGVIELVEGL
                     GEEVISEPQIFWDVSVAYQETEQYNKAKANYELAYSHFTNNPTFLKEYGLFLREEGEY
                     AKSQEVLRNYLELEPEDTEILSLFD"
     gene            complement(62098..63384)
                     /gene="aroA"
                     /locus_tag="U0290_000061"
     CDS             complement(62098..63384)
                     /gene="aroA"
                     /locus_tag="U0290_000061"
                     /EC_number="2.5.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoshikimate 1-carboxyvinyltransferase"
                     /protein_id="HEM2300131.1"
                     /translation="MKLITNKQGLVGAITVPGDKSMSHRSIMFGAIAEGKTVIRHFLR
                     ADDCLGTIKAFKALGVKIEETEEEIIVHGTGFDGLKQADGPLDIGNSGTTIRLMMGIL
                     AGRDFDTVILGDESIAKRPMNRVMLPLQQMGAKMHGKDGSEFAPITINGKQSLKRMEY
                     HMPVASAQVKSAIIFAALQAEGETIIHEKEKTRDHTEHMIRQFGGEIEMDGLTIRVKG
                     GQTFTGQEMTVPGDVSSAAFFIVAGLITPGSEIELTHVGLNPTRTGIFDVVEQMGGSL
                     VVKDSSRSTGKLAGTVVVKTSDLKGTEIGGDIIPRLIDEIPVIALLATQAEGTTIIKD
                     AAELKVKETNRIDAVATELNKMGADITPTEDGLIIRGKTPLHAANVTSYGDHRIGMML
                     QIAALLVEEGDVELERPEAVSVSYPTFFEDIRSLLK"
     gene            complement(63398..64501)
                     /locus_tag="U0290_000062"
     CDS             complement(63398..64501)
                     /locus_tag="U0290_000062"
                     /EC_number="1.3.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydrogenase"
                     /protein_id="HEM2300132.1"
                     /translation="MKGTVVIVGLGLIGGSIALAIKAKHPEAHIIGIDVSYHSLEVGK
                     SLGVIDEIGESILIDGPKADLLVFCCPVKETEQLLTRLPGLRLKENVIVTDTGSTKGT
                     IMEASTALRESGITFIGGHPMAGSHKSGVRAAKELLFENAYYLLTPTKDVAEDKVAEL
                     RTWLSGTNAKFLVLSPNEHDEITGMLSHLPHIVAAALVNQTQSFTEEHPAAFRLAAGG
                     FRDITRVASSDPRMWTDISISNQKTLTKQLTIWRDSMNEALEMLESEDASSIYAFFDG
                     AKEFRDSLPVHQGGAIPSFYDLFVDVPDYPGVISEVTRYLGEEEISLTNIKILETRED
                     IFGVLQITFQSDEDRDRAKRCIETRSNYTCHYE"
     gene            complement(64522..65604)
                     /gene="hisC"
                     /locus_tag="U0290_000063"
     CDS             complement(64522..65604)
                     /gene="hisC"
                     /locus_tag="U0290_000063"
                     /EC_number="2.6.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465449.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphate transaminase"
                     /protein_id="HEM2300133.1"
                     /translation="MKWKKSLTGLSSYKPGKREEEVMAELGLTKITKLSSNENPLGTS
                     PKVAELQANSSVETEIYPDGWASSLRTVVADFYQLEEEELIFTAGVDELIELLTRVLL
                     DTTKNTVMATPTFVQYRQNALIEGAEVREIPLLVDGAHDLDGMLNAIDDNTTIVWVCN
                     PNNPTGNYIDLADIQAFLDKVPSDVLVVLDEAYIEYVTPQPEKHEKLIRTYKNLIITR
                     TFSKIYGLASARVGYGIADKAIIEQLNIVRPPFNTTSIGQKLAIEAIKDQAFIEACRT
                     SNANGIKQYEAFAKRFEQVKLYPANGNFVLIDLGIEAGTIFSYLEKNGYITRSGAALG
                     FPTAVRITIGKEEENSAVIALLEKLL"
     gene            complement(65604..65978)
                     /gene="aroH"
                     /locus_tag="U0290_000064"
     CDS             complement(65604..65978)
                     /gene="aroH"
                     /locus_tag="U0290_000064"
                     /EC_number="5.4.99.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate mutase"
                     /protein_id="HEM2300134.1"
                     /translation="MRAIRGATTIETNSPEAIYAATKELFEEILTQNEITDSEQLTSV
                     IITVTEDIFAAFPAKAVRETPGFEYVPVMGMQEIPVPNSLPMCIRFMVFTDLHKPLEA
                     INHVYLRGAKVLRPDLVKEEDA"
     gene            complement(65975..67072)
                     /locus_tag="U0290_000065"
     CDS             complement(65975..67072)
                     /locus_tag="U0290_000065"
                     /EC_number="4.2.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-dehydroquinate synthase"
                     /protein_id="HEM2300135.1"
                     /translation="MPEITVRAKSKTYPVYINEFALEDVREKWTESLAKFSHVFVLTD
                     EHVAELHKAKLDAVLADLPVVTYYVAPNGEEAKTFRVYEDVMTKLIETGLDRKAVLIA
                     FGGGVIGDLGGFVAATYMRGIPFYQVPTTVLAHDSAVGGKVAINHPLGKNMIGNFYQP
                     EAVIYDTQFFATLPEREMRSGFAEMIKHALISDQTLLRALMDTFTEPKDFYTKDLTPF
                     LQRGIEIKANIVAQDETEQGVRAYLNFGHTFGHALEAYGNFGKWLHGEAITYGMIYAL
                     TMSETIYGLDFDLAEFKTWLKQLGYDTTFDATVPFNKILENMRHDKKTTFNEISMVLL
                     EEIGEPVIFKAEDDLIFETYKRVMRNGGNGI"
     gene            complement(67075..68241)
                     /gene="aroC"
                     /locus_tag="U0290_000066"
     CDS             complement(67075..68241)
                     /gene="aroC"
                     /locus_tag="U0290_000066"
                     /EC_number="4.2.3.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chorismate synthase"
                     /protein_id="HEM2300136.1"
                     /translation="MRYLTAGESHGPGLTTIIEGLPAGMPLLAEDVNKELKRRQGGHG
                     RGARMRIEKDQVQITAGIRHGKTLGAPVAMFVENKDWKHWETVMSIEPVPEKNEKSRR
                     VSRPRPGHADLVGGMKYGHNDMRNVLERSSARETTVRVAAGAVAKKLLHELGIEVAGH
                     VLEIGGTRANLTRDYAVSEIQETSEASPVRCLDGVAAEEMMQKIDDAKKNGDTIGGIV
                     EVVVGGVPAGLGSYVQWDKKLDAKIARAIVSINAFKGAEFGVGFEAARKPGSEVMDEI
                     LWSKEDGYTRRTNNLGGFEGGMTNGMPIVVRGVMKPIPTLYKPLQSVDIDSKETFNAS
                     VERSDSCAVPAASVVAEAVVAWEVAVAVLEKFDGDRFDTLKKHVEEHRNLTKEF"
     gene            complement(68445..68888)
                     /gene="ndk"
                     /locus_tag="U0290_000067"
     CDS             complement(68445..68888)
                     /gene="ndk"
                     /locus_tag="U0290_000067"
                     /EC_number="2.7.4.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside-diphosphate kinase"
                     /protein_id="HEM2300137.1"
                     /translation="MEQTYVMVKPDGVERGLIGEIVTRIEKKGLKIVAGKLMQIDREL
                     AEKHYAEHIGKSFFEDLIGFITSGPVFAMVLEGDDAIATARRMMGKTNPLEADPGTIR
                     ADYAVHTNRNVIHGSDSPESAKREIQLFFAPQEILSYQKAIDTWI"
     gene            complement(68907..69872)
                     /gene="hepT"
                     /locus_tag="U0290_000068"
     CDS             complement(68907..69872)
                     /gene="hepT"
                     /locus_tag="U0290_000068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenyl diphosphate synthase component II"
                     /protein_id="HEM2300138.1"
                     /translation="MKLNFLYANMQKDIDSVEKELKKALSGAAAETTSDAALHLLEAG
                     GKRIRPMFVCLSARLAPNADFDAVKNASVAIELIHMASIVHDDVVDNADLRRGRETIK
                     SKWGNHIAMYTGDFLFAKSLEYMTEIKDVAAHKMLSHVTVELSTGEIEQLKDKYNFDQ
                     SVRNYLRRIKRKTALLIAASCGLGGVVSGQSEADYQKLYRFGYYVGMAFQITDDVLDF
                     VGTEKELGKPAGEDLRQGNVTLPVFFAMEDPFLKKRISQVTEETPAEEIAVLVEEVKK
                     AGAKQAEDVATAYLKKAVEILDSLPQVPELKPLKQIVRVLDKRNY"
     gene            complement(69883..70596)
                     /gene="menG"
                     /locus_tag="U0290_000069"
     CDS             complement(69883..70596)
                     /gene="menG"
                     /locus_tag="U0290_000069"
                     /EC_number="2.1.1.163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="demethylmenaquinone methyltransferase"
                     /protein_id="HEM2300139.1"
                     /translation="MTETKEEKVHKVFEKISPSYDRMNSVISFKLHVKWRKETMKLMR
                     VQKGTNVLDVCCGTADWSIMMAEEIGPEGHVTGLDFSENMLKVGREKVKEADLHNVEL
                     IHGNAMELPFPDNSFDYVTIGFGLRNVPDYMQVLREMYRVLKPGGQLACIDTSQPNIP
                     GWKQVFNAYFRYVMPVFGKFFAKSYKEYSWLQESTREFPGMARLAEMFQEAGFSYVRY
                     ISHSGGASATHFGFKKKEQ"
     gene            complement(70619..71386)
                     /locus_tag="U0290_000070"
     CDS             complement(70619..71386)
                     /locus_tag="U0290_000070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenyl diphosphate synthase component 1"
                     /protein_id="HEM2300140.1"
                     /translation="MTYQAREAGLKEVEQLVHEQAVYQYLQENNEGGQMDKDQMLFLH
                     EAISGSDLTDASAYRVVSATLYMILAHDTHEKIDEPGDVVQLTRKEQELTVLAGDFYS
                     ALYYRTLAELEMIPLLRALQSGVQETNTAKTNIYQLHVATDEEYLSQLTLTNAAIFAK
                     FAKYFMKDDTFIALGCQFFLLKRLQTELATYKEIGASRLKRAFDHGYFAKEAVSNFES
                     WLVAIIHDVKSEVKRLKDKSEPLSNILGKRIIEVIND"
     gene            complement(71443..72012)
                     /gene="folE"
                     /locus_tag="U0290_000071"
     CDS             complement(71443..72012)
                     /gene="folE"
                     /locus_tag="U0290_000071"
                     /EC_number="3.5.4.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP cyclohydrolase I FolE"
                     /protein_id="HEM2300141.1"
                     /translation="MEQIDKQKIADAVKVILEAVGENPEREGLIDTPMRVARMYEEVF
                     AGLKKDPSVHFDTIFEEQHEELVLVKDIRFSSMCEHHLVPFFGVAHVAYLPQNGRVAG
                     LSKLARVVDDVSRRPQLQERITTTVAEIMMEKLKPLGVMVIMEAEHMCMTIRGVNKPG
                     TKTITSAVRGAFKNDDKLRSEVLALIKHN"
     gene            complement(72248..72523)
                     /locus_tag="U0290_000072"
     CDS             complement(72248..72523)
                     /locus_tag="U0290_000072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465458.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HU family DNA-binding protein"
                     /protein_id="HEM2300142.1"
                     /translation="MANKTDLVNSVAELADLSKKDAAKAVEAVFETIQTSLSKGEKVQ
                     LIGFGNFEVRERAARKGRNPRTKEEIDIPASKVPAFKPGKALKEAVK"
     gene            complement(72934..73914)
                     /locus_tag="U0290_000073"
     CDS             complement(72934..73914)
                     /locus_tag="U0290_000073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine-protein phosphatase"
                     /protein_id="HEM2300143.1"
                     /translation="MEVTRTDKAVTLTWNKEEVSEGTVVFVSSSPKLEDNSDPVFKVT
                     NDVDHYSYDTKDIPIYFFLETPNGDRTTVSERILPLESVFNFRDMGGYASKNGKHVKW
                     GKLYRSSNLVNINENDAALLQKLHIKWICDLRSSSEVQAQPTPAIEGVLNKHIPIGTA
                     KNEETKLPVTNDTTIYEPLMGESYRVFVQSVEGFREIFTEVLEDAKAGLPFVFHCTAG
                     KDRTGVLGALLLTLLDVPEKTIFDDYAITNRYQDDILQEMGGIVALFSNGTEKIDLET
                     FRPMAEARPEYLEIAFDEMKKQYGSVANYLEKGIGITAAEKAAFQKEMLE"
     gene            complement(74017..75033)
                     /locus_tag="U0290_000074"
     CDS             complement(74017..75033)
                     /locus_tag="U0290_000074"
                     /EC_number="1.1.1.94"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent glycerol-3-phosphate
                     dehydrogenase"
                     /protein_id="HEM2300144.1"
                     /translation="MTQKKVAILGAGSWGTGLALVLADNNHQPVIWGNLDKIVNEINE
                     SHTNSHYLPDIILPTEVKATLSLDEAIDGAEIVVIAIPTNAMRIVCKQLNEALKEPTI
                     LVHVSKGIEPETNLRMSEVIEDEIDASKRKALVVLSGPSHAEEVALRHPTTLCASCKD
                     LSAAEIVQDRFINNNLRIYTNDDVIGAEIGGALKNIIALGAGISDGLGYGDNAKAALM
                     TRGMAEITRLGVAVGSNPQTFYGLTGIGDLIVTCTSVHSRNWRAGNMLGKGENLDEVL
                     EKMGMVVEGVRTAKAVHGWAKKLDIDMPITESIYAILFENKDAREAVDLLMGREKKIE
                     KESF"
     gene            complement(75056..76366)
                     /gene="der"
                     /locus_tag="U0290_000075"
     CDS             complement(75056..76366)
                     /gene="der"
                     /locus_tag="U0290_000075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase Der"
                     /protein_id="HEM2300145.1"
                     /translation="MAKPVVAIVGRPNVGKSTIFNRIVGERVSIVEDVPGVTRDRIYN
                     SAEWLGKEFNIIDTGGIDLSDEPFLEQIRAQAEIAIDEADVIIFITNGREGVTDADEQ
                     VAKILYRSNKPIVLAINKVDNPEMRDQIYDFYSLGFGEPYPISGSHGLGLGDMLDAVR
                     AHFPKEEEEEYPDDTVKFSLIGRPNVGKSSILNALLGEDRVIVSDIAGTTRDAIDTTY
                     TFDGQDYVMIDTAGMRKRGKVYESTEKYSVLRAMRAIERSDVVLVVINAEEGIREQDK
                     RIAGYAHDAGRAIIIVVNKWDAINKDEKTINVWTEDIREQFQFLSYAPIVFVSAKTKQ
                     RLNNLFPLINQVSDNHSLRVQSSMLNDVISDAVAMNPSPMDKGKRLKIFYTTQVAVKP
                     PTFVVFVNDPELMHFSYERFLENRIREAFPFEGTPIRVIARKRK"
     gene            complement(76510..77655)
                     /gene="rpsA"
                     /locus_tag="U0290_000076"
     CDS             complement(76510..77655)
                     /gene="rpsA"
                     /locus_tag="U0290_000076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S1"
                     /protein_id="HEM2300146.1"
                     /translation="MSEDLFDVEVRNFEEGDKVTGTVTSVEDKQVYVGIPGSKLDGVV
                     PISELSNIHVETASDVVSVGDTLDLIVTKVEDDILVLSKRKVDAEKASDDIKAKFESG
                     EVFEAVVSDVVKGGLVVDLGVRAFVPASLVEDHFVEDFADYKGTTLTFKVVEFEPENN
                     RVILSHRAVVETEKASQKQALLSEIKEGDVIEGTVQRLANFGAFVDIGGVDGLVHISQ
                     ISYKHIATPQEALEEGQKVTVKVIGIDPENERISLSIKATLPGPWDGIAEKAPVGSVL
                     EGKVVRLVTFGAFVEIFPGVEGLVHISQISHEHIGTPQEVLSEGQTVEVKVLEVNEAD
                     KRLSLSIKELKDAPVEEADYELPEENTGFQMSDLIGDKLKGLQNDDK"
     gene            complement(78014..78688)
                     /locus_tag="U0290_000077"
     CDS             complement(78014..78688)
                     /locus_tag="U0290_000077"
                     /EC_number="2.7.4.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(d)CMP kinase"
                     /protein_id="HEM2300147.1"
                     /translation="MTKKICIAIDGPAAAGKSTVAKIVAKKLRFVYIDTGAMYRAVTY
                     IALKNNIAYEDEKAIATLLQKTVIRFEPGEVQQVFVGEENVTEVIRSLEVTNHVSIVA
                     AHPSIREALQERQQVFATEGGIVMDGRDIGTAVLPNAELKIFLLASVEERAERRYKEN
                     MAKGFAGDLGQLKKEIEERDHLDYTRTHSPLKKADDAIEVDTTSMSIDEVANKILSLA
                     ELKINN"
     gene            complement(78704..79666)
                     /locus_tag="U0290_000078"
     CDS             complement(78704..79666)
                     /locus_tag="U0290_000078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparaginase"
                     /protein_id="HEM2300148.1"
                     /translation="MAKVALITTGGTIASKKTASGKLASGELSGEELAALCQLPTEIQ
                     IDIYSTFQLPSMHITLPDLISLKQLIESIFMDETYDGIVVTHGTDSLEETAYFLDLAV
                     TDARPIVVTGSQRAPEEPGTDAYVNIRHAIYTACEINLRQAGTVVVFNERIFAARYVK
                     KVHASNIQGFSAFGFGYLGIIDNDQVFLYQKPLEHECFDIRLDLPEVVVIKCYIGADG
                     LFIDAAIDSGVSGIVLEGVGRGQVAPKMMPAIIRALDAGIPVVITTSAEEGNVYTTYD
                     YEGSTFDLYNRGVILGKDYDSKKARMKLMVLLASQEEINQTNFR"
     gene            complement(79747..80466)
                     /locus_tag="U0290_000079"
     CDS             complement(79747..80466)
                     /locus_tag="U0290_000079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465465.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM2300149.1"
                     /translation="MVKTRKEKREYEEPADYDMSSEGQDEFNNEPPMLSRSDSRRGKK
                     KTIFRYPLLNLLIVFFLLIPIVIVIVFVTVQNMGSSNEVKTETESTVNVSDNTQSKEE
                     KEKAKKAAEEKAAAEKAAEEKKAAEEKAAADKKKQEEDAVKAANAKKEQEAAEEKAAA
                     DKAAAEKAAAEKAEQQKANEASQQKAGGSHTVKAGDTLYSIARSTYGQAGAAAGVEKI
                     KQANGLGSDNVPVGTVLTIPQ"
     gene            complement(80786..82189)
                     /locus_tag="U0290_000080"
     CDS             complement(80786..82189)
                     /locus_tag="U0290_000080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecQ"
                     /protein_id="HEM2300150.1"
                     /translation="MNLEKELKEYLGFDEFRPGQKEVIETALAKRNCFAMLPTGTGKT
                     ICYQLAGHLMDGLVLIVSPLLSLMQDQMERMRAHGEKRVAALNSFLKREEKGQVLANI
                     HLYKFIFLSPEMLNNETVKNLLLKQRISLFVIDEAHCISQWGHDFRPDYLMLGKFIQE
                     AEFPVTMVLTATATKKVRADILTQLHLTDCAQIVYSVNRPNISLQVEKFSNQHVKKDR
                     LYALVRKLQTPGIIYFSSKKLAESTALELSEIADLRVAYYHGDMDTEDRIIIQQQFVY
                     GQLDVICATSAFGMGIDKADIRYVIHYHMPADLEAYLQEIGRAGRDGENSVAILLYAN
                     GDEFIQMQLADQDIPDANLMNLTNEQRKTLPETEQRFIEYYQRSGLSTKELTDKMDYR
                     KKWKRANLQQFIGYLHTTDCRRNYILRYFEETPLEVTPENCCDLDGAEIIDFEKRPIT
                     QQKEIPTWEAYLAYLLQ"
     gene            complement(82186..83193)
                     /locus_tag="U0290_000081"
     CDS             complement(82186..83193)
                     /locus_tag="U0290_000081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2300151.1"
                     /translation="MDKLDNYIMTILEKSITPRKLPFLHTVLAGRRTGQAVQDIHLFQ
                     MQHLFGLVPNLKASYLEKRISELVHQGSILSTENGYVTQGQLVAMFENDYPNFQGFTF
                     QGQAFAFFAHLRLAVQVVSNIHHHESYYLPVIRDKKVQQFIKHWVKHRDKSNLANQLY
                     GELVAWMNKLAVARPAFLVERFSGGELMGYTTEQIASKYQVEKWDVYFEVLHEVHRLL
                     IAMKKTPEEWPILASLVPDELNGLTSSAMQTYVLWQNGADLEAIERIRNLKKSTIHDH
                     FVEIRATLKEANVPYLPEETIIQTIITKKWNLLREIKAEFPDLDYYQIRLAVVSREGK
                     Q"
     gene            83347..>83437
                     /locus_tag="U0290_000082"
     CDS             83347..>83437
                     /locus_tag="U0290_000082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEM2300152.1"
                     /translation="MKYCLVEKDTCIACGACSIHAPDVFDYDTE"
BASE COUNT        24288 a        18160 c        14192 g        26797 t
ORIGIN      
        1 ttaagaaaag agaaagaaat ggtatttgtc tttctattct gtatttttta gcgtatgata
       61 gatatataaa acacacaaaa tttgtagaaa agtatggtga taaaatgaat gtcacttctt
      121 acaattggaa agaagaagta gccaatgcta taacgcatgg tattgggttt atccttagta
      181 ttcccgcgct cgtcttactt ataatattcg ccgccggaaa agataatcct ctttatttaa
      241 caagtttttt aatttatgga atttccctca tgttgcttta tatttgttcc accctgcttc
      301 atagttttaa accttgcaag gcgcggacgg tttttaacat tatggaccac gcagcgattt
      361 atgtattaat tgctggcagt tatacgccat ttgttttgat tacgattcaa gggacactcg
      421 gctggacact atttggtgtc atttggggcc tcgcaattgc tgggattatt tataagatat
      481 tcatgactgg caaattaaaa cttttgtcga caagtgttta cttacttatg ggttggatgg
      541 ttatgtttgc cattaaaccg ctttatgccg ggctgactcc aactgggttt tggttacttg
      601 caactggtgg gattatgttt acagtaggtg ctgtttttta cagtatccct cgtgtcccgt
      661 atatgcacgc gatttggcat ttatttgtta tcgcgggaac cgcttttatg tatttctgta
      721 ttttatttta tgtttaaata acgcaatgca aagaccttct ccaatgcgag aaggtctttt
      781 tatatagtat gtcacaattg agacttgttt ttaattatgt catactatat aatgattagc
      841 ataacacaat aaaaggatgt gattcccatc gaactttctc ctagacaaca tcaaattgtt
      901 gcctatgttc gcgcgaatga gcctgctaca ggtgactcta tcgctgcgca tttaaaacta
      961 acacgagcca ccattcgagc tgacttgtca attttaacca tgactggcat tttagatgct
     1021 cgtccaaaag ttggttactt ttactctggt ttagaaacga atccaattca ctttgatgaa
     1081 attcgtcagt taaaagtagc cgatattatg acacaaccat ttttcgcaaa aaaagaaacg
     1141 agtgtgtatg atgcgattgt tatgctcttt atggaagata ttggtagttt atacgtcgtt
     1201 gatgaggatc ttttggttgg gcttgtctct agaaaagact tgctaaaagg cgcccttgct
     1261 gatgcagata caaaagcgac gccgattgcg acaattatga cgcggatgcc aaacctcgtt
     1321 accgttacga aaaacgacac tgtgttacat gccgcagaac aactcgtatt ccaccaaatc
     1381 gattcgcttc ctgttctaga aaacaccaaa gtcgtcggaa aaatttcaaa aacccgtatt
     1441 actgcgctat ttgtagatac aattaaaaag gtttagtagg aggaaaatat ggaaaatccg
     1501 gttattatat acgttatttc agatgctatc ggagaaactg ctcaacatat tattcgcgcg
     1561 gtaacagctc agttttcgct taataagcct gcggacattc gccgccatgc ttttattcgt
     1621 gatgagagcg ctttacttga aacgttagaa gaagccaaag cggcagatgg tatcgtcgtt
     1681 caaacgctcg tacaagctaa gttagctgag tatgccacta atttttgtgt gcaaaacaat
     1741 attccaaacg tagatttgtt acatacacta accgctgcgg tcgaagcaaa aactggctta
     1801 aaatctaaac aagacccagg aaatatgcgt cgtcttgata gcaattattt tgatcgtatt
     1861 gctgccattg aatttgcagt aaaatatgat gattgcaaag atccacgtgg cctattagat
     1921 gcagatattg ttcttgttgg ggtatcaaga acgagcaaaa cccctctgag tagctttctt
     1981 gccaatcaaa attggaaagt tgctaatgta ccacttgttc ccgaaattcc gattccagcc
     2041 gaacttttcc aaatcccagc ggaacgtatt atcggcctta caaccacccc agaaaaacta
     2101 gcgcaaattc gcaaagtccg tttaaaatcc attggtttag acgaagcaag cagttattcc
     2161 agtgaaaaac gcattttaga ggaactagaa tatggttatg acacattcaa aaagcttggc
     2221 tgccaagtca ttcatgtaga agataaagcc attgaggaaa ccgctgccct aatcacggaa
     2281 attatcacga gttaccacta atttgaagag gtgaataatg tgagaaaatt tgtctatcag
     2341 ttcagtgaag gttctaaaga aatgaaaaat attttaggag gaaaaggtgc taatttggcc
     2401 gaaatgacga atatcggttt gcctgtgcct cctggtttta ttatctcgac cgatgcctgt
     2461 aacgattaca cggcaaacaa taaacacctt tccgaagcta tatttgaaga agtaaaaatt
     2521 catttagcag aactggaaaa acaaaccggg aaaattttcg gatttgcaga aaaccctcta
     2581 ctcgtttccg ttcgttcggg tgcccctttt tcgatgcccg gtatgatgga taccgtgctc
     2641 aatctcggtt taaatgacca agccgcagaa gggctcgcca acttaactgg tgatgctcgt
     2701 tcggcttatg attcataccg ccgttttatt caaatgttcg gtgacgttgt ttttgaaatt
     2761 ccaagctacc aatttgaaca ggctcttagt cgcatcaaaa aagcaaacaa ctaccgctta
     2821 gatacagaat taactgcgac tgatttaagc aatctcatcg atgcttacaa actaattttt
     2881 agccaagcaa ctggtataga ctttccacaa gatccactgg aacaactgcg gcttgcgata
     2941 atcgctgttt ttgattcctg gatgaatcct cgcgctgtta tttaccgcag attacatgat
     3001 attgatgcaa gttttggtac agccgttaat attcaagcga tggtttttgg aaacactgga
     3061 gaaacgagtg gaactggcat tacctttacc cgcaatcctt ccaccggtga aaagaaggtg
     3121 ttcggggaat ttttactgaa tgcgcaaggt gaagatgtgg ttgcaggaat tcgcacccct
     3181 gagccgataa gtgcgctgga agaaagaatg cccactgttt acaaggaact cctccagact
     3241 tgtgaacttc tcgaaaatca ttatttagac atgcaagata ttgaatttac catcgaaaaa
     3301 ggcaaactct atgtcttaca aactagaagt ggcaagcgaa cagccaaagc agctattcaa
     3361 gcggccattg attttgtcca tgaaggaaaa atcactcgtc aagaagccat tatgcgtgtg
     3421 gaaacaaaac aactaaacca attacttcat ccaacttttc ttgaaagcgc tcttaaaaat
     3481 ggtcaagtca tcgcaactgg tttacctgca agccctggtg ctgcaacggg gcaaattttc
     3541 tttgaagcaa aagaagctgt ccaagcagcc gaacgtggca ttcctgtcat tttagttcgt
     3601 aatgagactt ctcctgagga tatcgaaggt atggcacgga gtaacgctat tttaaccgct
     3661 catggtggta tgacttctca cgctgccgtc gttgcccgcg gaatgggaaa atgctgtatc
     3721 gctggatgtg ccgaacttac tattaatgaa aaagataaaa cgatcattct tcctactggc
     3781 gacacactgc atgaaggtga tgcgctctcc cttgatggta gttccggcaa agtttacctt
     3841 ggagaaattg ccctcagaga agcgaaaatt ggtggctatt ttgacgagct gatggcctgg
     3901 gctgatgcgg agaaaagatt aatgattcga gtaaatgcag ataccccagc agactttaaa
     3961 aaagcgcttt tatttggtgc ggaaggtatt ggtctttgcc gtaccgagca tatgtttttt
     4021 gatgaaaaac gaattcctta tgtacgccaa atgattttag cagaatcatt aaacgagcgc
     4081 gaatctgttt tagcaatttt aaaagaaatg caaaaagccg atttcaatga attattccgt
     4141 attgcagacg gtcgttcggt aaacattcgc ttgcttgatc cacctttaca tgaattttta
     4201 ccaacaatga agcaagaaat agaacaattg gctggcgcga tgaatcgaac cgttcctcaa
     4261 attacaaacc gaatcaacgg actaagagaa gccaatccca tgctcggaca tcgtggttgc
     4321 cggcttgcta ttacgttccc agaaatttac cggatgcagg cggaagcaat tatcgaaagt
     4381 gcaattatcg ttcataatga aggaatagat gttcacccgg aaatcatgat tccactcatc
     4441 gctacgaaaa acgaacttag ctatataaaa aaagaactgc aacaagcagt ccaagctatt
     4501 tttgatagag aacaagtgtt gattccctat gatatcggaa caatgattga aattccgcga
     4561 gcgtgtgtaa ctgcagccga aatcgccgag gaagcagcgt tctttagctt tggaaccaat
     4621 gatttaacac agctcactta tggtttttca cgtgatgatg cgaccaagtt cctagccgat
     4681 tattatgaaa aagatatttt acctaaagat ccatttgttt cgattgataa aaatggtgtc
     4741 ggcgcactag ttgaaatggc agttacacgt ggacgaatga cttcggaaca tttaaaaatg
     4801 ggggtttgcg gcgaacatgg tggcgatccg gaatctatcc agttcttcca tcaattagga
     4861 cttagctatg tttcttgttc cccgtaccgc gttcccattg cccgccttgc agcagctcaa
     4921 gcagcattag ctgagaaaca attagttcca actatctaaa aaaagccaga tgacaatcaa
     4981 atagactgtc atctggcttt ttctcctatt atttttcaca aatcgcaaag taatttcctt
     5041 cgttatccga aaaattgaac acccggccca ttggtaaatc gaccaaatca ccaaccgtaa
     5101 tgcctttatc tttatattct tcataaagtt ctgcgacatt atttccaaat agtaaaatag
     5161 atggtgtccc aagattcatt tctgggttca tttccgccac tttctttttg ttttgaagaa
     5221 caaaagtagt ttctacacct tttgttggcg ctatctcaat ccactgaatt tcgccattta
     5281 ccacttcttc tgaaactacg acaaaatcta atttttctac ccaaaaatct ctcactgcag
     5341 cttgattttc tacatataac atcacttgac caattttttc aaccatcgtt catcgtcccc
     5401 tcgtcatttc tttttctttt agtccaaact ccgcataaaa gtcacgcttc atttctaata
     5461 aatagcgcaa atcattcata aattggaata aaatcgctct attttcaaat tctgctcgtg
     5521 tctctgggag cttactactt cgaaactcat gcaccatctt agtaatttcc gccactaaat
     5581 cctctgctgt attatgctca tctaacgtct gtgctgtttt ttctgtaatt tctgccagcg
     5641 ccatactttg ctcagaagaa tgatcaaacg cgactaaatg ccgtttcatc tgtgttaaaa
     5701 ttcgatattg cacaagccgc atatcgacgt actgcgaata atagtgggaa gaagcaaaaa
     5761 actgattgtc taaatttctt gctgcttttt cctgtgcata gtctaatgta ccctttaatt
     5821 gatttaataa gccaaactca tcatgatact ccgactgatt ccgaagccct tgcgtcattt
     5881 ccgtcaaaat ttgccgcata attgcttcta ttttttgttg gctgcgtttt aattcgtctt
     5941 ccatttttgg catatataaa tttaaaataa tcgcaatacc tgcgccaact gccataagta
     6001 acagttcatt tttaaaccag aaaaaggata atgattgttc gagtaaaata tgcgatacga
     6061 gtaccgagct caccacaatt ccatcagcaa catgcagtct tacagcaagc ggaataaaaa
     6121 tcagtaaata aagtccaaaa ctcaccgcgt tataaccaat gagcatgaaa aatacggcag
     6181 caatagatag tgccaaaacg gtcgaataaa cccgctgaat cgctagttgt aaagaccctt
     6241 ttttcgtatt ttgtacactt aaaattgcga taatccctgc cgaaactgca tattccaagt
     6301 gtagccattc cgccaaaatt atcgccagtg tcgctgcaat cgcggttttc accgttcgca
     6361 ttccaatccg catatgtcca ctcccctttc tatgtccaac ctatcatagc acgaaagcga
     6421 aaatcacaaa agaaaaacct tgaagatcat tcctcaaggt cctacattat tcttcatcta
     6481 gtgttttttt gaaacgtgct cggaaaaaga atcctaaacc gaccacaaca agtatcgcaa
     6541 tgacgctata aattattgtt gaaaagctat ccataaaaac aacaatttca ttccatgact
     6601 ccccaagcac agctccaagt ccaattaaaa ctgtattcca aagtaagctt cccgcggtcg
     6661 tcaaaattag aaacctcgac attttcatct tggtcatccc agctggaatc gaaatcaggc
     6721 ttcgtattag cggaatcatc cgacataaaa atacagccca acttccatat ttcaaaaaga
     6781 aactttctgc gcgttcaata tcagattcct tcagccgcaa aatccggccg tattttaata
     6841 caattttcgt gagtcgttct ttaccaaaat aagaagcgac tttatacagt aaaattgcgc
     6901 ccacaacaga acctagtgtt gctacaataa tcaccatcac gacattcaat gatgtaactg
     6961 tcgtcataaa tccaccaaaa gttaagataa tctcagaggg aataggtgga aacaagtttt
     7021 caaccataat caaaacaaaa atacctatat agccaaaatc agccataata cttgtaatcc
     7081 aagtttccaa aaaacacact cctgtacttt atttcccttt taaagtaagt gcttgctttt
     7141 caattctact atactagctc tactttttca atcaatttgg taaaagaaaa agaatttggc
     7201 attttacaca ccaaattctt ttaaatttat tttgcaacta gtcgcatttg tacagcttct
     7261 attcttaaac tttctcctgt tgttcctgct gttgctccat ctttaaccca actttgccaa
     7321 cctttatttt ggacatgcgc tctatactgc acactataat ttttagcaat atttccagtt
     7381 aatttcactt ggaaagcttc cagacgtttt gactgtccac gagttccaga aatttcccca
     7441 tttttcaacc aaccttgcca tccactacct tgtacatgtg agcgatattg aatatctcca
     7501 gaatacggca tccctgataa actaattttc attgcttctg ctcgtaagcc aaggccaact
     7561 gtgcccgaag tcatactatt agcaacgttt cccatccatc ccttactttg gacgtggagc
     7621 tcgtaattta tccctttttg tttgcttaca gaaagattat tgtcaaacgc ccaagtataa
     7681 atattattta gtttttcttt tgttattctt gtaccaaagt tgtccccggt accatttaaa
     7741 tattcatatg cgtttactgc taaaatctgt tttttagaat tataaacacc actaccacta
     7801 ctaccacctg ttgtatctaa tctataaaaa acattatttg cagtgacttg agagatattt
     7861 ccagtttgag tgtacaattt cccttttttg tcaccatgat aaccactaat agtaattgca
     7921 ccagatgtat tagttgttaa ccccattgtt ccagtttttg tcccaatatt tttatctaat
     7981 ttaataactc cataatcttc tgtagaaggt tctttttttg tccattcttt tggaacatac
     8041 atttttcttg cttttgctgt tccaaaagga gctttcgtgc cattatatcc aggatataca
     8101 gtcacttttt ttgcccatcc accatctttt ttaccatata aacaatgagc ggctgtaagt
     8161 acagaatctt caccaatcaa ttgtccacta cctatataag tttttccatt tggaaattcc
     8221 attacaaggt aagcgctcgt tgaatatgga tattgagttg tatttgttac aagttttcta
     8281 ccatctccgc caaaaatcgt ttttaaacct ggggttagaa cggcttcctc attttcaata
     8341 gttaatcctg ataaatcaac ctcaacttca tcagatgtat ctaacgtccc cgttgttgaa
     8401 ttaacatctt ctaaatcact aatctcatcg actataaact cttctccgtc atttgttacc
     8461 gtttccccaa ctatcttttc atcgattggg gcttcctctg ctgcttgtgc aacaattcct
     8521 ccacctaata aaaatagagc aaaagcaagc atcaaagtaa atattctaag ctttttcata
     8581 gttgcatctc ctttttttgt ctattagcaa ataaatatat caaaaaatca cttgattgta
     8641 tcgcattgtt gaaacttaaa ttagtttaaa acttcccaat ataagtcaat tttcttagta
     8701 gctatttttg acatatttat ttactgtata actataataa catattcaca atcatactgt
     8761 actatgcagc tagcattatt tagaactcaa agcatattaa aaagcagcca aaatatatca
     8821 gctgctttgt agtttacatc tttaattctg ctttactcgc gaaaaatcct gctaaacgat
     8881 ttttcacttt tcggatgccg ccagcttcat cactttctaa attcatcggc attaccggtt
     8941 catgtaagct cattcgtagt aagaaccagc cttcaccaag cgcacctttc gtattcacac
     9001 gaattccttc ttggttcaca ggttctaatt ccatatccgg atcagcttct acgaaagtca
     9061 gaaaatcagc tagaacttct tttccataag ctttaaaatc ggttgcggta atactcaaac
     9121 gaatttcttc gctttcagcc ggttctctta aatcggctat taaatctggc aaatcttttc
     9181 cattttttcg taaagtggca taagtcatta aaattttggc aatgagatat gcgccatcat
     9241 ccaagaaata attttctttt aatgcggcat gaccacttac ttcgatagca atttctgatg
     9301 gtgttccgtc tgcatttagg cgcagtgctt cattgataac attacgataa ccacgtttaa
     9361 atcggtgttg tttcccgcct tttgcttcga taaaggtttg caaatgccca gatgttgtgg
     9421 agtcagtcac gatagttgtt cctggttttt cttctaaaat aatactagag ataacagcaa
     9481 ttaatgggtt gcggtttaaa ctttcgccat ttttatccat aatcgcagca cggtctacat
     9541 ccgtatcaaa aatcacgcct aaatccgctc cactagcaag gaccgctttt ttcaaactag
     9601 ccatagcttc ctcattgtca gggttcggaa tatgattagg aaaatttcca tccggatcta
     9661 aaaactggct tccagaaatg tctgcgccaa gttctgccaa tactttctca gcaaaaaagc
     9721 cgccagcgcc gttccctgca tcgacaataa tatggcttcc tagaagtggc ttcattttgt
     9781 cagctgcatc tgtgattcca gctctaattt tatccgttaa gtctgctgca tatgtagaaa
     9841 gtaaatcttg ttttgttacc ttcccaagat ttagtccatt ttctatgaat gatttatctg
     9901 cgtgagccac gatataatca atatcttcgt gttcagctcc accagatttc gtaaataatt
     9961 ttagtccatt atacataaaa ggtaagtggc tcgctgtaat cataatgccg gcatcgcagt
    10021 catagtcttc gtactgagtt gccataaaca tggccggcgt agttgcaagc cctacatcca
    10081 ccacattgat tcctgcaaaa gttaaccctt tgacaagtgc cgcttttaaa cgttcagctg
    10141 aaagtctgct atcatggcca attgccactt tcgcttgacc ttccactttt ttctcctctt
    10201 ttagccattt cgcaaagcca taagcaatct tttctacacg ttcgtctgtt agcgtaatct
    10261 gatatttttc cgtagcaata gctattccac gtatgtctga tccgttttgc agtgcttcta
    10321 acgctttcgt ttctgattga ttcatgtcat tcctccagct tctgtatttt tccccttcat
    10381 tatagcttaa attgcgaaat tttcacatag cttttacaaa agatgtgctc tattcgcgat
    10441 aataatttgc aagtcaacgg ttaattcttc cggtgggttt cccagtaatt cgcttttttt
    10501 atccgcttca atatgccaac caagtggcgt catttcaaga aaatctgcaa ataattcttt
    10561 ggcaatcggc gctttgtagg tcactcgttc gacatgttct acgcttaact tttctgctaa
    10621 tcgtgatgtg accgactcat tcgaataact acttttctca tcaacataaa taaattcacg
    10681 taattcgcgt aaataattcg cttctggcac tacttttaac aaaaacccat ccttctttaa
    10741 aagccgtttg aactccacgt aattcgatgg cgataaaata tttaaaatga catccgccgt
    10801 ctctgcttga ttcgggcaat tggctaaatc agctaccgtc caagaagtac caggatagtc
    10861 gcgtgccgct tgtttcactc cctctttggc gatatctaag ccaaccgctt ggacattaac
    10921 accagtcgct tgtaaatttg atacgactcg cgccaaatga cttccttccc cgcaacccgc
    10981 atcatataaa acaagttgtt cttttttctt ctccgcaata atttctgtca ctcgttcgat
    11041 taatttttca aaaaagccac tcgcaatcac ttttttacgg gattcgaata atgcttgatc
    11101 gtattttgtt ttatgcgctt gttttagtaa atgtacgtaa cctggtttgg cgatatcaaa
    11161 cccgtgacct tctaggcata caaatgactg cggctcttta aactcgaatg cttcgccaca
    11221 aatcggacaa gcaagaagcg ccatattttc tttcaaagcg cgtttattta tctccatttt
    11281 tgataacaat taatactcac tccactcgaa aaacgttgcc cgcaaacagg caacgtttct
    11341 actaatttct ttcatacgta taaaaagtgt aattgtactt atttttttca tctttttcat
    11401 ggaattcttt cgccacttcg gaaaaattct cccaatccac ttcaggaaac gcagtatcag
    11461 cctcaaactc tgcatcaatt tttgtcacaa tcagctgatc cgccacatcc ataaataaac
    11521 gatagatttc tgcaccacca actatataga ttggttcccc cgtctcagca agggctaaaa
    11581 cagcttcttt tgaatgaagt atctctgcat catctaactt gagaccttga tctcgtgtca
    11641 atacgattgt ctttctattt ggtaaagctt ttcctaacga ttcataggtt tttcgcccca
    11701 tgacaagtgt tttcccagtc gtcgtttttt tgaaaaactg caaatctccc ggtaagtgcc
    11761 acggcatttt gttatctttt ccaatattac cagcgcggtc ttgtgcccaa acaaaaataa
    11821 tcatccaaga aaacctccct tatactgaaa ttggtgcttt aattgctgga tctggattat
    11881 aaccatccag tgaaatatcc gctacatcaa aatcaaaaat cgttgctggt ttatctgaaa
    11941 gcactaattt tggaagtttg tgcggtgttc tagacagctg ttctttcact tgctcaatat
    12001 gattgttata aagatgcgca tcacccatag tatggataaa ctcgccaact tccagcccta
    12061 cttcacgtgc aatcaggtgt gttagaagtg catagcttgc aatattaaac ggtacaccaa
    12121 ggaaaatatc ggcactacgt tgatacagct gacatgataa ttttccgtcc gctacataaa
    12181 attggaatag cgaatgacat ggcggtaaag ccatattcgg aatatcttct ggattccaag
    12241 cagacacaat caaacgacgc gagttcggat tcgttttaat catttcaatc aaatccgcta
    12301 actgatcaat tgtttctcct tgtgaagtct tccattcgcg ccattgttta ccgtaaatat
    12361 tacctagctc accgtattta ttcgcgaacg cttcgtcttc taaaatccga gctttaaact
    12421 tctccatctc cgcttgatac acttctttga aagctgaatc acgctcagca cgcagtccaa
    12481 agtcagtcat atcttcgcct ttataatcat cgcttttcac aaaacgctca aaagcccatt
    12541 cattccaaat attattatta tgctgtaaaa ggtagcgaat attcgtatct ccatgtaaaa
    12601 accatagcag ttcacttact acaagtttaa atggtacccg ttttgttgtc ataatcggaa
    12661 agccctcttg taaatcaaaa cgcatttgat aaccaaatgt gctgattgtt ccagttccag
    12721 tgcgatctcc tttttgtgtt ccattctcta aaacgtactt ttctaaatcc aaatattgtt
    12781 tcatcgttcg cactccttat tccgcgtatt gtgataaaaa ttcccagcgt tccatcattt
    12841 gttcgagctc cgtttctttt gccgtgatga gttcgctaat ttctgctgct tttgtaaagt
    12901 ctgctccggt ttgttccaat gtttcattaa gcgattcaat ggtttgttct aattcactaa
    12961 tggcatcttc aattccgtcc cactcgagtt gttcttggta ggtgagttta actttctctt
    13021 ttttctcagg tgctgccttt tcgaccgaag tattcgccat ttttttcatt gatttcgctg
    13081 gttttgcttt agcctccagc tctttcaaat aatcactata ttcaccgtag aaaatttcta
    13141 cttcaccaat tgctcggaaa acgagcaatt tgtttacgac tttatcgagg aaatatctat
    13201 catggctaac cgtaattacg gtaccattga atgattctaa atagtcttct aatacggtta
    13261 atgtttgcgt atctaagtca ttagtcggct catccagtaa taagacattt ggtcgttcca
    13321 tcaaaatgcg aagtaagaat aaccgtcgtt tttctccacc tgataagcta ccaattttct
    13381 tcccgtggga atttggtggg aataaaaatc gttctaacat cgcactcaca ctgattactt
    13441 cgccaccaga agttgtgact tgctctcccg cttcttgcaa ataagcaatc attcgcatat
    13501 ccgggtccat ttcttcattt tgttgcgtat agtaaccgat ttgtacggtt tgacctgtga
    13561 ctacttcccc agcatctggt gctagttttc cagccaacat gttcagtaaa gtcgattttc
    13621 cagttccgtt gttccctgta ataccaaggc gttcaccagg ttggataatc aagctgaaat
    13681 cctgcaatac ttgtttttca tcaaagcgtt tttccaagtt tttcagttcg aaaacatctt
    13741 ttccaagacg actagtaaca aaatcaatcg ccagttctga gtcatcggtt tttgttttca
    13801 cttttttctc taaatcgtgg aaacggtctt gtctggcatt ttgtttagtg gcgcgacctt
    13861 gaggaccgcg acgcatccat gctagttcct tacgataaag gtttttattt ttctcagatt
    13921 cacggacttc gttttccatc cgaatggctt tagattccat gaatttctcg tagttcccaa
    13981 cgtatcgata agccgaaccc cggtcgagct ccaccatgtg atttgtcact cggtcaagaa
    14041 aataacgatc atgggtaaca agcaagacag cccctttaaa gcgatttaaa tattcttcca
    14101 accaacgaat tgactgaaaa tccaagtggt tggtaggctc gtccaaaatg agtaaatctg
    14161 gcgtctcgat taagacttgc gccaaaccta cccgttttcg ttgcccacca gaaagctcgc
    14221 ttattttcgc ggttaaatct gtaattccta aacgctccaa aatcgttttc gcttctgtgt
    14281 tcatatccca agccgcacta gcatccattt cttggctggc ggctgtataa gcatcgtgta
    14341 atttggtatt ttccgcatca agtgacatcg caagtaacac ttcttcgtac ttgcgcattg
    14401 cccgaagcgc cgcagtatcc ccgtcaaaaa cagccgaaag aactgtatct tcttcattaa
    14461 attcaggatc ttgcgccaaa taaccaatcg tataatcttt tgctttcgta acagtacctt
    14521 tatccccaga ttcactacca gaaataattt gcaataacgt cgatttcccg gtaccattta
    14581 caccgattaa accaatacgt tcgccctctg ttatcgttag cgagatattt tcaaacaggc
    14641 tttttccacc atatgttttt gttaaatttt ccacttttaa ttgtttcatt tagtcccatc
    14701 catttcctgt tcgtccttat ctattctagc tgaaaacata gaacatagca attgcttaag
    14761 atgaaaaaag ttccaaaagc ggctcttcca cttttggaac ttttactttt aaaataaacc
    14821 ttgtgcattc ccattttcat cgacatccat attaagtgcc gctggttttt tcggtaaacc
    14881 tggcatcgtc attacatcgc ctgttaaagc aacgacaaaa ccagcaccaa gttttggaat
    14941 gaattcgcga atatgaataa caaaatcagt tgggcgtcca agtaatgttg ggtcatccga
    15001 taaggaatat tgggttttcg ccatacaaat cggataacga tcccaaccat attttttgaa
    15061 ttcaacgatt tgtttctgcg ccttgctgga aagttccaca ccaataccgc cgtatacttt
    15121 cgtcacaatc gcttctagtt tttcttccat cgaccacgca tcatcataaa tgcgtttgta
    15181 gtccgcttct ccactttcaa cagccgcaat gactttatcc gcgagttcaa ggccaccgtc
    15241 gccgcctttt tcccaaactt ctgtcagaga gaaaggaatc ccgtgttctt tgcagagcgc
    15301 ttctaatttc gctacttctg cgtcagaatc ggtaatgaat ttgttaatgg ctacgacata
    15361 aggaatacca aatgtttgaa tagattcggt atgtttttgt aaattcgtaa aacctttagc
    15421 tagcgcatcc acattttctt cgctaagctc ggttttcaaa gcgccaccgt gcattttcag
    15481 tgcgcgaatc gttgctacaa taacaacgca atctggcgct tttccaaggg caggaacttt
    15541 aatatctaaa aatttctcgg caccaaggtc tgcaccaaat ccagcctctg tcactacata
    15601 ctcacctagt cgaagtgctg tgcttgtcgc agaaacacta ttacatccgt gagcaatatt
    15661 cgcaaaaggt ccaccatgta caatggcggg tgtatgttct aatgtttgca ccaaattagg
    15721 ttttaaagca tcttttaata gtaaggttag agcgccttcg tagcccattt cgccaactgt
    15781 aattggttct tttttatagt tataaccgat cacgatttca cttaaacgtt tctttaaatc
    15841 ttttaaatca cttgctaaac aaatgatcgc cataatttca gaagcaaccg taatatcaaa
    15901 accgtcttca cgtggaaccc cttgaatagg acctccaaga ccaacaacca cttttcgaag
    15961 tgcacggtcg ttcaaatcaa ctacacgttt ccaaacgatt cttctaccgt caatatctag
    16021 gtcattccct tgttgcatat ggttatcaat aaatgccgat aaagcattgt ttgctgctgt
    16081 aatcgcgtga aaatcaccag taaaatgtaa attaatatct tccattggaa taacctgcgc
    16141 gtatccgcca cctgttgccc cgcccttaat acccatggta ggtccgagcg atggttcgcg
    16201 aagtgcaata acggttttct tatctttttt agagagtgcg tcgccaagac caactgtcac
    16261 tgtcgatttc ccttcaccag caggcgttgg gttaatcgcc gtaacaagaa caagttttcc
    16321 tggttcttta tcttttagcg agtgaatggt atcataggat aactttgctt tatactttcc
    16381 gtaaagttcg agtgcatctg cgtctagtcc taaatgttcc gcaatagtcg taactggtag
    16441 aatttctgct tttgatgcaa tttcaatatc tgatttcact ttatttgaca tgatatcccc
    16501 tccgaatatg tatattgtaa caaagaatta agatgttttg gcttctttag tgcatcaaaa
    16561 aagcgcgaca ccaagcgatg taacaccatt ttgattctaa agtaaagcct gattgcgcaa
    16621 aaatcaacat ctcaaccttg gattaccgtt attcctttgt ttctggtttg gtcgtctcca
    16681 tcgccttgag cgtcttcagt gcatccggat gattttcaaa aaactgaaca acatctccaa
    16741 ttcggtcaat cgagttccag ctcaagtggt gttcaatacc ttccacatca tgataaatat
    16801 gggacggatc tacgccaata atacttaaaa aactctctaa taatgcatgt ctttctagga
    16861 gccttttccc catttgtgtt cctttaggcg tcaaaattaa tccacgatat ttctcataga
    16921 ttaaatattc gtctttatcc agtttctgca ccatttttgt tacagaggaa ggatggacaa
    16981 atagctcatc agcaatatcc gaaaccctgg cataaccttt cgtctcaata agggaataga
    17041 ttttttcaat ataatcttcc atactaggtg ttggcatagc tataccctcc aacttaaatt
    17101 ctttcacata gccaattgta ctataatatc gccctttcta aaagcaatta ccctttcgaa
    17161 aacgaaattt ctcctagagc ggtcttccga aaaaaaaccg taattagtac caatttaaga
    17221 catttaagtc aaaagtatgc ccttacaagt ccaaaaattt aaaaaatatc gaaaatcagc
    17281 ttgacgttta taggtatttt gatttatagt gttagtatca tatgcggcaa cgctatgaac
    17341 tgaaaaggta gtatttgcga gaaatttttt taagttaaaa tgaaagcgtt ttaacaaatg
    17401 attctagcaa ttattagcca tacttaggag gatttatttc aatgcaaaat gggaaagtaa
    17461 aatggtttaa caatgaaaag ggttacggtt ttatcgaatc agacggcggc gaagatattt
    17521 tcgttcactt cacagcgatc caaggtgatg gctacaaatc tttagaagaa ggccaagcgg
    17581 taacatttga agtagtagaa ggtaatcgcg gcgctcaagc agccaatgta gaaaaagcct
    17641 aatccagttg ccaaatagac acggacttaa aaccggtatc cttttaccgg tttttttatt
    17701 gcaaaaaaat agctttcctt ctataataaa gccacatcta ttcatctaaa taggaggcac
    17761 ataatatgga agttttcgtc gatggtgcaa gtgctggaaa tcctggacca agtggggctg
    17821 gaatcgtctt aaaagcagaa ggtatttatg aacaattcgc cattccgctc gcagttatga
    17881 cgaatcatga agcagaattt attgcgatta aactcggact ggaagaagcc ataaaaaaac
    17941 aagctacatt aattcgtcta tactcagatt cgaaagttgc aatcgaagca attcataaac
    18001 gacatgcgaa aaatccttta ttcaagccgc atttagaagc aattttagaa atggccgatt
    18061 catttgaatt gttttttgct gaatggcgta atgtaagtca aaataaacaa gccgaccaac
    18121 ttgcgcgcca ggctataaaa aaacagaagc aacctggagt caaataacca gattgcttct
    18181 gttttttatt cgatatcgcg cgttaacgtt tttaaaccgt atttttcaac tacagcaaaa
    18241 gcatcctcgc ggaaaccgtc atatttcaag ctaggcaagt ctatttctag tgggacttct
    18301 gtatgaatcc gagctaattt ttgacttaat tctagcatcg ctaagtcttc ttggattttg
    18361 gtttgttgcg ctggtttcag tttatcaagg ttgttcaaga cgccttcaat agactcaaat
    18421 tcttgaataa gcttaatcgc tgttttttca ccgattccac gaacacccgg ataaccatct
    18481 gaagtatcgc ccattaatgc tttcacatca ataaattgtc ttggagaaat acccatctct
    18541 tcaaaaaatg tcgcttcatc atatcgttta taattgccat aacctttttg cataatccag
    18601 acatcattcg tcggtgcgat tagttgcagt aaatctttgt cgccacttaa aacagttgta
    18661 gcaatcgtat tactcgcttg aacggtaatt gtcccaatac aatcatctgc ttcaaaaccc
    18721 ggcacaccta aattgacaaa gccaaatcca gcagctacct ctttcgctaa atcaaactgc
    18781 ggaatcattt cttctggtgg cgctgttctg cctgttttat aaccatcata taattcattt
    18841 cgaaatgttt gcgaccccat atcccagcaa attagtgtat gcgttgggtt actctggcga
    18901 atcgctgcaa acatgtggcg cataaaacct tgcaccccat tcgtcgggat tccatgttgg
    18961 ttaaacataa attgtttgga aacggctgtt gcataaaatg ctcggaaaag tagtgccatt
    19021 ccatcaacaa cgagcaaatt ttctcgattt tcggtcatat ataatcctcc aatttccttc
    19081 tactgccatc tattgtagca taattataac tggctcgcag aaaaaaagga gctttttacc
    19141 agcttgcttt tgtcacgccg ggtaattgtc cttgatgtgc tagttcacga aaacgaatcc
    19201 gcgacatacc aaatttacgc atgtagccgt ggggacgtcc agttagttca caacgattgt
    19261 gtagccggga cggggaagaa tcgcgtggta atttgcgtaa ttcatcgtag cggccttctg
    19321 cttttagcgt tcggcgaagt tccgcatatt tttccacgag cgcttgttga cgttcatgtt
    19381 tggcaacttt tgatttttta gccatgtgtc tctcctttct taaataataa tcattacgat
    19441 ttacatcata cgccgattta attaggaaag caagtcttct gttttaaaaa aaccgatatc
    19501 cagttaaact gaatatcggt tgtcctatta tttagttcca actatcggac catacgcgtt
    19561 agagaaacca ttactataag gcactcctgc tttattttta cctgcatccc agttcaccga
    19621 ccaagtcata atccctttca ctggtgtgcc ttttgcttgt aaacgagtga aaacattttt
    19681 gacgatttgc ggatctttta cataaccagt tgcggctgca tccacattgg ctggtaaacc
    19741 gaacacgaat ttattagctg ggattttcaa gtaaccacga gtcccattaa taaaggagtc
    19801 cgccatataa tataagaaag attcttttaa tgtatcatta ttttgcgcaa tccattggtt
    19861 tgtttcatca acccaaacac catcgccacc ttgattgtat agttgtggcg caatatagtc
    19921 ataataatta gcaagtgagg ttaggtagct ttcataggca ctacctggtt ttaaataagg
    19981 aaattctggt gccatcgtaa ttaggaaatt tttcccttcc gctttataat gatctttaac
    20041 gatttttagc gctgctggga taaccgtttt attatctccc gcggtaatcg cactttgttc
    20101 taagtcgatg tctaatccat caaagccata tgtttctact tggcggataa tttcattcgc
    20161 gaacgcctct tcatccccag cttttagttc cacgtgtcca tctgctccac ctagtgccaa
    20221 aagaacggcc cgaccttctt tatttaatgc gccgacttgc gccctgaaat cgctatcatt
    20281 tattcccact ggtttaaatg tcggaatgcg atttaccccg tcccctttca taaaggaaac
    20341 atctaccacg ttataagctt tcggtgtatc ttttagggcg atatcagccg aagtcccttg
    20401 ttgatagcca tcatttccgg aagatttcca actatgccag tacccaacta gcacctgttt
    20461 gttagaaata tctggcatta cagaagcgtc atccgtcgcc gcttgtgctg tactgccaaa
    20521 tgcccccagt cccgcaccaa ctaaaagtaa agacaaacca ccaaccatta cttgttttcc
    20581 attcatctac ttttccccct tactttatct accccaagct tgcttttttg gagctactag
    20641 aaaataccca tcataatgaa aataaaacta gaaaaacagc aaaaaagcga aattgatata
    20701 gaccaatttc gctttcaaat aaatgaatgt gtataagtaa ccgagaaaaa atagcccaat
    20761 taaaactgtt ttatttttta cttcgcatgt tgtggttctg gatctgctac ttttttatct
    20821 ttgcgatgtg gaatcatatt gaaaatgata ttcagtgtaa ttgctgtcac actgcccgca
    20881 acaattccat tactcgtaaa taagcgaaca aaggatggga aggcattgaa caaatctggt
    20941 acgactgtaa cgcctaaacc aacaccaact gcacacgcaa tgattaacaa gttttcttga
    21001 gaagtgaaat taacttttcc aagcatctta atcccttgtg cgacaaccat gccgaacatc
    21061 gcgaccatag cgccgccgag aactggtgtc ggaataatcg ttgtcactgc gccaattttt
    21121 ggaatcagac caagaacaat aaggaaacca gctgccgcat aaatcacttt acgtgtttta
    21181 ataccagaaa gttgaacgag tccaacgttt tgcgaataag ccgtataggg gaatgtatta
    21241 aatacgccgc caagcataat cgcaagccct tctgcccggt aaccacgcgt taaatctttt
    21301 tgcgttaatt tgcgttcggt aatatcagat aaagcgaaat atactcccgt tgattccacc
    21361 atgctgacaa gcgcaattaa aatcatcgta ataattgccg gccactcaaa ggtcggtgtg
    21421 ccaaaataaa atggttttgg catatggaac caactcgcct cactcacagg accaagcgag
    21481 atccctttat aaagcgctgc aaaaagcgaa ccaccaacca gaccaattaa aacagcaatc
    21541 gccttcgaaa acccttgtcc aaaacgatac actaaaataa ttaaaagtaa tgttccaaaa
    21601 ccaaggccga gattatacat tgagccaaaa tcttttgctc cttctccacc agcaagatta
    21661 ttaattgcaa cgggaataag tgttaaacca atcactgtta caaccgaacc agtcacaaca
    21721 ggagggaaaa atcgtacaac tttggagaaa aatggtgcta ttaataatac aaaaagtcct
    21781 gaaacaataa tcgaaccgta aatcgcgcca atgcccatat cttgtccaat taaaataatc
    21841 ggcgcaatag cttgaaccgc acatccaagt acaaccggta aaccaattcc aaagaagcgg
    21901 ttaaccgtta attgtagcaa tgtcgcaatc ccgcacataa aaatatcaat cgaaactaag
    21961 taagtcattt cttctccatt aaaacctagt gctccaccaa ttaatagtgg aacgattact
    22021 gctcctgcat acattgctag aacatgttga aatcctaaag ctgcaatttt ccctttacct
    22081 aacatttact cctattcctc ctctaaaaat aagatttctt cgttttcaag tgaggcaatt
    22141 cgtgctagtg aataaactgg aatccctgtt ttatttaata attcgcgacc ttgttggaaa
    22201 gatttttcaa tcacaatacc aattcccgcc acttttgctc cggcatgttc tgcaatttca
    22261 agtaagccga gtgccgcctg accatttgct agaaaatcat caataactaa aatcgtatca
    22321 tctgctgtta aaaattgttt tgatacagaa atatcattcg attctttttt agtatacgaa
    22381 tagacagtgc ttgtgaataa attgtccgtt aatgtcactg attttttctt gcgggcaaac
    22441 acgactggta cggaaagcgc gagccctgca aaaacggcgg gtgcgatacc cgatgattca
    22501 atcgttacaa ttttcgtaat ccctaaatct tggaaccgtt tagcaaattc atttcccatc
    22561 gcttgcatta aaaccggatc aatttgatga tttaaaaaag catctacttt taaaacattc
    22621 cccggtaaaa ccgtaccttt ttcttgaata aactcttcca gtaatttcaa aacgattctc
    22681 ctttcaaaat aaaaaaactg cttctctaaa aatagagaag cagtatagaa gccaccaatt
    22741 ttcggagtga cttctttata caaactactc atagtccggt tatttacggt aaccaggtag
    22801 aaactcgtcg cccaatcgca actattatat aagtatttcg gttttaagtt atgttgttta
    22861 ttatagcttt ctaaaggagc agggtcaagc taatttttta cttattgaat tggtaaacat
    22921 aagcgtatct tttttctagt aaatctagca aatacgttgg atttaagcct tctccagttg
    22981 tatctgttag aatctcgaga ggtttcttcg ttttaccaaa tttatgcaca tgttcagtca
    23041 accacgtttt taattccgaa taatcatcgc ttgcgataat cgcatcgata ttcggaattt
    23101 ctttttgcat ttggttaaag aactgcgccg cgtacattaa acctaatgca taagacggga
    23161 agtaaccaaa atcgccacca gcccagtgaa tatcttgcag aacgccattt gtatcattat
    23221 ctggacgaat gccgagatat tcttcgtatt tgtcgcccca tgctttcggt aaatctttta
    23281 cttctaattc accgttaata agtgcttttt caagctcata gcgaatcata atatgaagcg
    23341 gataagttaa tgtatcagct tcaattcgaa tcaacgaact ttcagagatg ttcactgcgc
    23401 ggtaaaaatc ttccaaagtc acatgatcaa aagccggttt tgtaatcgct tggaagtcag
    23461 cataattact tttccaaaat gctaaactag aaccgataat aatttcataa aataatgatt
    23521 gtgattcatg aatgcccatt gatgcgccgt ttgcaagtgg agtacctaca agtgctgcat
    23581 caaaattttg ttcgtaaatc gcatgaccac cttcatgaat cgtaccaaaa acagccattt
    23641 taaaatcatt ttcattgtaa cgggtcgtaa tacgaacatc gccagtattt aaaccagtcg
    23701 caaaaggatg cacggtttca tctaaacgac ctgcttcaaa gtcaaagccc attttattca
    23761 gaatgcgaat gctaaattct ttttgttttg cttcggatat tttggtattt aaaatcgtcg
    23821 catctggctt cacgccttca tttgcgattt tttcgcgaat cgccataatt ccgtcgcgta
    23881 ctttttcaaa tacggaatca agcacagata cggttacacc tggctcatat tgatcaagta
    23941 atgtgtcata tttattttct tcataacccc aatattcaac aaatttacgc ttcatttcaa
    24001 ggatttttgt taggaacggt tcaaaagctg caaaatcatt ttgttcgcga gctgttgtcc
    24061 aagccgtttc tgcttgcgct actagtttag tatattccgc gtattcttta cttgggattt
    24121 ttttgtttaa atcatatttt ttttgagatt cttctaaagt tttaagagtg atttcagata
    24181 gattttcttt atcaaggtta agtccagcaa taaaagcagc catttcttca gatgtttgca
    24241 tattgaaaat ctcttcagat agaacgccaa taacatcaga gcgaccttcc attccttttg
    24301 acggggcgcc tgtacgaaga tcccaataaa ctaatgccag tgcttcttcc agtgcttcca
    24361 tctttttaat atacgctaaa aattcctctt ctaatgtttc taccaaactt aactcctcca
    24421 ttcaatcaat cttctttttt aggacgtggt tttcttggac cccagtattg atataaatct
    24481 gtgcgcaagt aaccattgta taatttccgt tttttcgtcg cttttttacc ataaacttct
    24541 tcaaaaagtt cataagaggt aaggacatat actgaccatg tcggcatgcg tttataaaca
    24601 atacccattt cgcggtaaag ttggcgcact gcttcctcgt cttctaaacg ttccccgtat
    24661 ggtggattcg caacaacgac cccgtactca tcttctgttt gaaagtcagc tacttgtagt
    24721 tgtctaaagg taattaagtc accaaggcca gcttcgaccg cattttgctt tgcgatttca
    24781 attaaacgag catcaatatc gccaccaata atatttagcg gttgatcata gttagctaaa
    24841 tcttccgctt cttgtctcgc atccgcccaa acttgcttcg gcatccaatc ccatgtttct
    24901 gacacgaact cgcggttaaa accaggcgca atattttgcc caattagtgc cgcctcaatt
    24961 ggaattgttc cagaaccaca aacgggatca taaaatggtc tatctggatg ccaactcgta
    25021 agtagtacaa gtgccgccgc cattgtttct ttgattggcg cactaccttg tgctaaacgg
    25081 taaccacgtt tatgtaatcc cgcaccacta gtatcaattg ttagcgtcac ttcatctttt
    25141 aaaatagaaa cttctaactt aaataacgcg cctgtttcca tcaaacgacc agaacgacga
    25201 tacttttcac tgacacggtt aacgatggct ttttttacaa tcgcttggca atcaggcaca
    25261 ctataaagcg ttgacttaac tgatttacca gccactggaa actgtgcatc aagcggtaaa
    25321 taatcttccc aaggtaaagc tttcgtcttt tcaaatagtt catcaaatgt cgttgcttta
    25381 aaaacaccaa ccacaatttt cacacggtcg gctacacgaa gccatagatt ggctctagca
    25441 attgcagata aatctccttc aaaatatact ttaccgtttt ctacttttgg gtcatagcct
    25501 aaacgcgcta cttctttccc aacaattgcc tctaaacccg aagcagccgt tgccaccaac
    25561 tgaaatgatt tcattgtttc ccatccttta attaaatttc taatgaaaaa agctgtttta
    25621 agaggaggag gtttgtttta aataggcatt caaccaggtc gaacacccac cttaaaactt
    25681 gcgctccggc cttctaaaac agccttcaat gttaaattaa atcctgtaaa taacgctctg
    25741 taagccatgt tctgttcttt actacgtaca gggtaatagt aaagagataa ccatctatct
    25801 gcgcaaaaat acatttgcgc ctcgtccctt gttcttgatt cctcgggaaa agtgccccta
    25861 ccataagttt gagtttctcg ctcgtggggt ttacctcgtt ccacttccga gcatttctgc
    25921 cggaacttcg tcactgtggc accttcaagg ttataagacc atatccgaag acttaggtca
    25981 ttcacctgcc gtcaaaccgg aaatccggaa tgccctggct tattgtttga ccaggcacga
    26041 tcactacggg catcacagca ccgtgcgagc atggactttc ctctgcttcc ataagaaaac
    26101 agcgattatc cgaacgttat tcatttattc ttaacttact tatactagca tacctattcg
    26161 ttatcgtcca gcttatttcc aaaaacatgt ttttctaaat tagaaagacg ctttagaata
    26221 tcaaagttgg tcgttccagc aggttgtgcc gctgcttgga aagttggagc tggttgtgtt
    26281 gaagttctaa gtggagcatt atcaagctct tgtacaagtc gaatattttc cgcttgaagt
    26341 gcttcgattt cttgcgtaaa tgtactgtaa tctttaataa ccatgtctaa aaactcgtca
    26401 acatcttcag gactataacc acgaagccca gttttaaatt ctttttccaa aatttcttta
    26461 cctgttaagt gatactcaaa ttgttccgaa gtcatataac tccacctcta tctctattct
    26521 tacgtatttt tgttctaatc atatacttac ccttattttt tcaaatctca caccatttgt
    26581 caatctattc gagtgttttt tatgaaaata actgtttact tccatattaa aacgtttggt
    26641 tcatatcctc tacaacttct tggagtgcat aaaaatcaat acagtctata taataattag
    26701 actgttcttt tgcttgaatc gctcggtcat aaaagaattt cggcgaacct tctttttcta
    26761 aatcatatac aagtaatgcg ccatccgtat tatcaataat aaaaccatct cttgccgcaa
    26821 attgcgctgg actttcataa ggacgcttcg taataaaagc atggtaatcg gctttttcta
    26881 gtacttcgct cgcccataat tggttcgctt cattccagtt agcactttgc ttttcaaacg
    26941 gttcaaggat tgctagttta atcggatagt ctgcttttaa ttctgcaacc acatcgccag
    27001 cccaaagttc aattcctaac tgaccagaaa taatcaccca ttcaagccca tcttccacga
    27061 gtggaagcaa atgccgttta attgtttctt ttatataaac cgcttcatct gcatcctttt
    27121 taaaaattcc cagttcaaaa tttttatacc ccgtcactgc gatggatttc acatcaattc
    27181 ctcttttctt tttaagaaat ctctcactct cgttagtgta tacttggtag attggtagtg
    27241 atctaggaag tgtttataaa aagactttcc attaaatgca cttactgcag tcatttgaac
    27301 attatcacaa gcttgtctta attgtagttc tcctaaataa ggaggacgct ctttgtttac
    27361 ccacggaata gctaattcta aaaacgcatc cgcgctattt tttgcttcgt caacgaaagg
    27421 tttcatatct ttataaaaat caaacggctt tgcttcttca cggttactta aatataattc
    27481 ccaatttttt tcgttttgaa gaagcaattt ttccgtacgg tttaaaagtt ccattctatc
    27541 actcttttct tcacattttc agatacttca agcatagcat aggacgcaaa atcttgccta
    27601 aaattagatt attagctaaa atatggtaaa atagacgaag gtacgttcta tttatgaggt
    27661 agtttcatgc cgaaaagagc tattttgcat ttaattgata ctatcatttt catttttatt
    27721 tgttataata gatgatagtc taaaattcag aatagaaatt ttctgataga ggtgaaaaaa
    27781 atggctattg gttaccctaa cggcaagaag tatgcagcga gtcatgaggt tcttcctcaa
    27841 caaaaacgga aagctcctgt aacttatggt aagcgtggta tgtctttgga agatgaccta
    27901 aatgatacga ttgcgtatta tttaactcac gaaatagcag tcatccacaa aaaacctacc
    27961 cctgtccaaa ttgtcagtgt ggactaccca aaaagaagta gtgccaaaat taaggaagcc
    28021 tacttcaaaa caccatccac aacagattat aatggtgtgt ataaaggaaa atacgttgat
    28081 tttgaagcaa aagaaacgca aaatacaact tcttttccgt tgagtaattt tcacgatcac
    28141 caaatgacac acatggcaaa cgtcttaaaa caagatggta ttgtatttgt cattattgct
    28201 ttccaaaaac tcggagaaac tcatttcatt ccctttgaga aattttatcc gttttgggaa
    28261 cgtatgcaaa gtggtggaag aaaatcagtt actatagcag aaatacaaga tgtatcagac
    28321 caaattcctt atggtctaaa tccaaggctt gacttcttgc aatccataga caaattatac
    28381 ttctagtcaa acctttttta aaggagagag atttttaatg gcagataaac cgcagacaag
    28441 atctcagtat cgcaataaac aaagtggtgg ttctaaaaag aaatcccaaa aacgaggaaa
    28501 acgagtagta gcgaatattt tcaaaactat tttctttgtg ggattatttt tagctttctt
    28561 tggtattgcg gctggtgcaa ctgtctttta cgattacgca aaagatgcac caaaactgac
    28621 cgactccaag ctacgagatc cactttcatc taagttactt gataaagatg gaaaagtttt
    28681 cgcagaagtt ggaaccgaac ggcgggaata tattgaatac aaagatatac ctgaaacact
    28741 aaaaaatgca attctaacaa cggaagatgc gcgtttttat gaacatgatg gcattgaccc
    28801 aattcgactt ggtggagcag taattgccaa tttgacagac ggttttggcg cagaaggtgc
    28861 aagtaccctt tcgcaacaaa tcatcaaaat gtcctatctt gattacacaa ataaaacact
    28921 tgcaagaaaa gctcaagaag catggttagc tcttcaatta gaagaaaaat atagcaagaa
    28981 tgacatctta gaaatttatg ttaataaagt ctatatgtca gaccgtgtcc acggcatgca
    29041 aacagcttcc gaacattact tcggtaaaaa tttgaaagac cttacgttag ctcaaacagc
    29101 cctacttgca ggtatgccac aaagtccgaa taactacaat ccttatgaac acccagaagc
    29161 agcaaaaaaa cgtcgtgatc aagttttaac aaatatgtat acacatgata aaattacaaa
    29221 agaagaaatg accgaagctc aaaaaacatc tatcactacc ggacttcgct cgaaaaaaga
    29281 tcgtgaagat aaaatttaca aatacgattc ttacgtcaca caagtgttaa gtgaaattcc
    29341 aaaagaatac gatgtttatc gtgatggttt aactatccat acagcgcttg accgtgatgc
    29401 ccaagaatat acggagaaaa tgctcaatac gaacgaaatt gttaacttca ctgatgatga
    29461 aatgcaagcc ggtatagtgc ttcaagatac taaaactgga cgtgttcaag caatcggagg
    29521 cggacgtaaa caaaaagtaa ctcggggata taactatgca acccaagtaa aacgttctgt
    29581 tgggtctacc atgaaaccaa ttgctgacta tggtcctgct tttgaatatt tggattggtc
    29641 gactgcccat attttagaag atgaaccata tacgtattct ggcggaaccc ctattaacaa
    29701 ctgggatttc gcatacaaag gaccaatttc agtaagacaa gcactttacc aatcacgtaa
    29761 tattccagcc ctaaaaaccc ttcaagctgt tgggctagat aaatccgagg aatttgttaa
    29821 taaacttggc atcacctatg atgaaggaca aaacgtagaa tccaacgcta ttggagcaaa
    29881 cagttccaac ccaatgcaaa tggctggtgc ctatgctgca ttcggtaaca aaggaatcta
    29941 taacaagcca cacactgtta caaaaatcgt tttatcagat ggacaaacag aaattgacac
    30001 agaaccacaa agtactgttg ctatgaaaga atcaactgct tatatggttt cagatgttct
    30061 aaaagatgtt ctttctatcg gaacaggtac atcagcagcc gtaccaggcg tacctgctgc
    30121 tggtaaaaca ggtacaacga atattccacc tgaattcact tcgaagtact actaccctag
    30181 tggtgctgcc cgtgactcat ggttcgctgg atatacaacc aattattcga ttgctgtatg
    30241 gaccggctat gatgacaaga aaaaatatgt ttcagcaagt gaacaaaaaa ttgcgcagcg
    30301 gatgtttagt aaattaatgg ctcatgcatc tgccggtaaa actactgcag atttcaaaat
    30361 gcctagcaat gttgtttccg tcccaattct aaaaggaagc aacccaattg cacgcgctgc
    30421 tgcaggcact gcaagtgata aagtaagtta cgaattattc ttatccggaa ccgctccaac
    30481 caaaactgct tctactccag aagacgagaa gaaaaaagca gaagaagctg cgaagaagaa
    30541 aaaagcggaa gaagataaaa agaaaacaga tgaagagaag aaaaaagaag aagaggctaa
    30601 gaagaaagca gaagaggaag ctaagaaaaa ggctgaagaa gaagccaaaa atcttactgc
    30661 ccctgccggc ttaagagcaa gttataatgc cggctctaag caaatcaatg tttcttggtc
    30721 tgcggtagat ggtgcaacct atgaagtaac agtcaatggt tctactacga cagtatcttc
    30781 tacttccgtt tcagtaagcg gaggtaatcc tggagacact gtttccatta acgtcgtcgc
    30841 tgttaaagac ggtaatcgaa gccctgcctc ctctactaca gttaaaattc cagatagtta
    30901 atacaaaaag agcggaagat gtttaaacat cttccgctct tttttatgat cttttcgcaa
    30961 ttaatttacg ctgttctaac attaattcat ttaattgccg aaaacctaaa tacgtattac
    31021 ctcgctttaa tacatattct aaccgctcat ctaaattgag tggttttgtc tccaacgttt
    31081 taatttggtc catcaaatta tctagctgta ctggccggtg attactccaa aataaaatag
    31141 ataaaaaaat accgagcgca tctctaaccg ttacaggaga tggtttttta tgcactttca
    31201 aatcagcttc catactttca gccaaattag tcatatgttt cgccaatttg cgacaagctc
    31261 gctctgtttc atttttccaa ggaataactc caccaccttt ggtaaaaaac tgttgttctt
    31321 gccaaaaagg tagaccacta acataaatgg attctggatc atattcttct aaaataacat
    31381 ccggtgctgg gaaatcagga tgtgttaatt ctactgcata tttaaattca gccatcgaat
    31441 cccctcactt tcgcttgttt ttttccttct ctgcataaat agagtaaggg acaggtcggg
    31501 cattctgggt ttcttgcttt acaatgatat cttccaaaga aaatcatata atgatgtgca
    31561 tcagaccaga gttcttttgg tagctttctt tttaacgttt cttccacttc tacaacagaa
    31621 tctttccatc tacaaatccc taagcgttta ctaattcgtt cgacatgtgt atctactgcg
    31681 attgctggaa taccaaagcc aactgataaa acaacattgg ccgtttttct acctacacct
    31741 ggaaggctct caagttccgc atgcgtcttt ggtacttccc cattaaattc gattagaatt
    31801 ttctcggata atccttgaat attttttgct ttattacgat ataagccaat agagcgaata
    31861 tcttccatca attcttccag tggaacagcc aaataatctt ctggtgagtg atatttttca
    31921 aacagcgagg cagtcacgcg atttactaac acatctgtac attgagcgga taagacaaca
    31981 gccaccagta attcaaacgt atttttatga actagctcac agtgtgctgc tggaaacatt
    32041 tttgccattt cttctatgca taatacggtt tgtttattcg ataacaattt gtgtacctca
    32101 cccttttctt ttttcaagcc agtcgtatag aggaatcgaa cctgcgcttt ttttcacttc
    32161 cgtttggtta attgcttggc ttgtgcgccc attttgatga aattcttccg ctacacgctt
    32221 ggcatcttct attgtcttaa ctccttgttt cgaccagtta agcagaatcc tatcaatata
    32281 tcggaaattt aatttttgcg aaataacagc ttcttttaat gcttctttga ttaaatccgg
    32341 gctcgttcta tcttgctcta cccacgcgga taacatttct gcttccattg gagaaagcgg
    32401 tcttccaaac tctgcttcga atagagtata taaactggtt tgtttttcta actctttttc
    32461 atgtttacta tctgcttcct tgttttcata taaagcgact agtttacccc agagtggtgc
    32521 caaattatat tgttcagaaa tcattcgtga attatcttgg ctttgttcga tagcaatcac
    32581 accttttttc aagagtgagt ccatcgtttt aattgtttct tccagtggaa gcgttgttct
    32641 attggttaac atttccatcg acgggaaaaa ttctgcctct gctgcaaagg attgaatttg
    32701 aagtaatagc actagttcta cttcgtttaa gccaatggtt gcatagtttt tcactagcac
    32761 ttgcggtaat gtcacttgcc cttcagccat ccatttttca agaatttttg gattcatatt
    32821 taacacctca ctacaaaatt ataacatggt tttcgaggga aaaatataaa agtactgcta
    32881 aaatcatgaa atcccgcgga aaagattatt ttcaatttaa agtccacaaa aaaagtgaag
    32941 ccagtatgtt ggcttcactt tttaacttac ggatataaac ggtttagtaa acgtgggaac
    33001 ggaatggttt cacgtacatg ttctgtgccc gaaatccaag caactgtacg ttctaagcca
    33061 agaccaaaac cggaatgtgg aacagagcca taacgagcta agtcaaggta ccagctgtag
    33121 gcttcttgat ccaaatcgaa gtcttccatt ctagcttgaa gcgtttctaa atcgtgaata
    33181 cgttccgatc caccaatgat ttctccgtat ccttctggag caatcatatc agcgcacaac
    33241 acaacttgat cgttttctgg atcttccggc atataaaatg gtttaattgc ttttggataa
    33301 tgtgtaatga aaactggttt ttcgaagctg tctgcaatcg ctgtttcatg tggtgccccg
    33361 aagtcatctc cccaaacaat atcatcaaag cctaattcgt gtaaacgttc gattgcttct
    33421 gtataagtaa tacgcgggaa cggtgcaacc attttttcta aatgactaac atcacgacca
    33481 aggcgatcta gttctaagcg gcagttatca agaactgctt ttactaggaa tgccacgtag
    33541 ttttcttgta cttgtaagct atcttctaat ttgtaaaatg ccatttccgg ttcaatcatc
    33601 cagaattcaa ttaagtgacg gcgagttttt gatttctcag cacggaaagt tggaccgaat
    33661 gagaatactt taccgaaagc cattgctgct gcttccatgt acaattgacc actttgagat
    33721 agaaacgcat cttcatcaaa atatttcgta tggaaaagtt cggttgttcc ttctggagca
    33781 cttccggtca agattggtgg atcgattttt aggaatcctt ctttattgaa aaactcatag
    33841 ctagcgcgta taatttcgtt acgaattttc ataatcgcat gttgacggtt agaacgtagc
    33901 cataaatgac ggtggtccat taaaaattcc gtgccatgct cttttggtgt aattggataa
    33961 tcatgtgatt cgctaattac ttctacacca gatacagcca tttcataacc aaatggtgaa
    34021 cgagtatctt cgttaattgt acctgtgaca tataaacttg tttcttgggt taatgcttta
    34081 gcagttgcga aaatatcatc gccaacttct gcttttacga caacgccttg cataaatcct
    34141 gttccatcac gtaattgtaa gaaagcaatt ttaccacttg aacgcttatt cgcaagccat
    34201 gctccaatag ttacttcttt tccgacaaat tcggatgctt gattgattgt aattttcact
    34261 tgtctacact ccctatttca taaaactttt gattcgattt atagcttctt ggaataagtc
    34321 tggatttgtt gcataagaaa ggcgtatata atcaggcatt ccgaatcctg agcctggaat
    34381 gactgcgact ttcgcttctt ctaaaagagc tgctacaaaa gcatctacat cctgaaaacc
    34441 ttttttatgt gccgcttctt ttacttcaat aaagaaataa aaagcgccat ctggtttttt
    34501 cggtttaaaa cctggaatgc tacttagttc tggataaaag cgttccattc gttcttcaaa
    34561 agctttgtac attttttctg gaacttcttg actaccaaca tacgcttcaa gtgcagcata
    34621 ctgggcatta gcagttggat tacttgttaa atgatccgct aacttactca ttccagcaat
    34681 gatttcttta tttgcagctg cgtaaccaat tcgccagccc gtcattgaat atgctttaga
    34741 tacaccatta ataacaatag ttaaatcata caaacggtca ctcaaactcg cgatagagac
    34801 taaatcagct ttgttaccat agtataattt ttcgtatatt tcatcagata aaatgtaaat
    34861 ctgatgtttt tcagcaactt caccaatagc aataagctcc tctttcgtat agcacatacc
    34921 agaagggtta ttgggtgaat ttaaaacgat tgcttttgtt tttttcgtga tagctttttc
    34981 aaaatttgct gctgaaattt tgaaatccgc gtcaaaacca gtttctacaa aaacaggaat
    35041 accacctgct aatttgactt gttcgggata agttacccaa tatggaactg gaataatgac
    35101 ttcatcgcct ggatctaaaa tcgtttgaaa cgcagagtag agtacatgtt tagcaccagt
    35161 acctacgaaa atctggttcg tttcgtagtt taagaactga tctttttgga gcttatcaac
    35221 aatcgcttgt tttagctcga tgattccact agaaggagta tatttggtga atcctttgtt
    35281 catggactca attgctgcat cgataatatt ctgcggggta ttgaaatctg gttccccagc
    35341 acctaagccg ataacatcaa ttccttcttg tttcatttgt tttgctttag ccgtaatcgc
    35401 aagtgttggc gacggggcca ctcctttgac acgttttgat aacggtaagt ccattttatt
    35461 ccctcctcca atttagttac aagttttcaa tctctctgta ccattcacct gtttcaaagt
    35521 taatgtcaaa gtagtttagc ttgtcattct tatctaagta ggcaacttcc caaataggcg
    35581 tttctttttc cattcctaaa ttcacatgta aaattttctt tggattcttt tcttttgtga
    35641 ctttatcgcg tgcttgttgt tctgtaatcc catcagatgc gaatttaaca tatactttgt
    35701 cggatttttt ctttggaacc caaacaatga tattcttatt cttactgttc ttaccagtta
    35761 atacgtaata cacttctttt ggcccattat aaagataaaa ttgatctgtt gtttttaaat
    35821 caacttggcc acttattcgg tctaaggctt ctgtttctgc attggttact ggtttttctg
    35881 catatctaaa gtacagaaaa gctgctacga caagcacaat aattatgccg agaataatcg
    35941 ctatccattt gccaatctta cgcttaggtt ttctatttcg caaaataatc tcgctcattt
    36001 ctatttctaa attaccggaa ttcctccggc gatatgcatt ttcattttcg catagataca
    36061 ttatagcaat agcggcctaa gatttgaagt catatcagga aaaatttaac cttccttaaa
    36121 gaattcactc acttcttcta ataaatccgc ctgtttgcct ttcaagattg gcgcgcttgg
    36181 gattgactct aaaaatgctt ttccaaattt tgtcgtatct actcgattat caaaaacaaa
    36241 tacgattccg cggtcggatt ctcttctaat taaccgacca aaaccttgct taaatcgcag
    36301 tacagcttca ggtagagaat aggtttggaa agcattctcc ccgcgttctt tgcgaaggga
    36361 tatttgtgct tttgtataag ggtcatccat cggagcgaat ggtaatctca caataactag
    36421 acatgacaag tcttctcctg gaatatcaat cccttcccaa aagcttgtcg taccaagcaa
    36481 aatagactta tcaaacattt ggaattgttt tgtcagtcgt gcggcgcttc ccgctgaaac
    36541 tccttgcgct agaaggacat actcttctaa tgatttttca tttttcatat gataatacgt
    36601 tttttgtaac atatcagaag cggtgaaaag aacgagcatc cgtccattcg ttttcactgc
    36661 tatgtggcga atatatttcg caagttccaa ggtatatcgc tcaattggtg tgtctttaat
    36721 tgggggcata tcatctggaa tcatcactcg cgcattttct ttataatcaa acggtgaagg
    36781 aatgcgtttt tccataattt gttcttcttc cagaccgaga cttttccgta aataatcaaa
    36841 cttccctttt acggttaaag ttgccgaagt catgatgaca ctttcttttt tagcaaaaaa
    36901 ctcttttcca agtgtcggct ccacttccat caagacagct tttagacgaa tgctagaaat
    36961 agaatgattt ttgtctgctt gtaaataaat ggtcaaaata ggcgacttct tatgcaacat
    37021 ttgctccagt tgttttacca tattcttcca atcaagtaaa aaagcataca tttcttccaa
    37081 aaaggcgctc tctgcctcac ctagttcatt ttcttcttgt ttcccctgtt ctaacaatgt
    37141 ttccatattt ttttcggact cttttagcaa atgtaatact ttttcagcag cgtaataaac
    37201 cttgtcattc caagcatctt tttcgctgtt ttctactaag acaacttctt gtaaattttt
    37261 acgcgcgaag tttaactgca ttttcagaag accgaaaaac tcttccaccg catcacttaa
    37321 cttcattgcc gcaatatcta aatcatataa actgtctgct tctgggaaag ccattgcaag
    37381 ccttgtgaga agggaatatt tttctaaaga gcctagctga ttcaaaaaat attttatttt
    37441 tcggtaagac agaacaaaac ttccttgcat acgagcacta tccgcaaaat gatgggcttc
    37501 atcaattact gcaaaagcat acttaggcaa tgtttctctt cccgaaaaat ggtcatttaa
    37561 aagtagtgcg tgattaacaa tgactaaatc tgcatttttg gcttgtttga tgttgaattt
    37621 atagaaatcg tgtgcgagcc aaggatcatg tttttcagat aaaaaccagc ctgtgtgctt
    37681 catccgattc cagaataact ccccgccgct agataggttc acttcatcaa tatcaccagt
    37741 cgttgtttcc gtcagccata cgagcaattt aagcttcgtc acaactacat catattgcgt
    37801 atcgacttct tgaagtaact gctcaaattt aaacaaattc aaataatgat cgcgcccttt
    37861 tagtaagcta gctttcactt tgaatcctgt taatttcgtt aagagtggta catctttttc
    37921 aaacaattga gcttgaagca agttggtgta tgtactaata actaccggta attcagcttg
    37981 tttcgcttgg taaatagctg gtaaaaagta acctaacgat ttcccaatcc ctgttcccgc
    38041 ttcaatcaag gcatgttttc ctgatttcat cgcttggaaa accaaattca tcatttcaaa
    38101 ttgaccactt cttgcataaa gtggcgctcc agcttttttg aatagtgcca ttttagcttc
    38161 gtctgtttca ggaaattcaa gtaaatctgc tctactatag gtgggctttt cgacttcttt
    38221 tttgcgaata actagtccac gatgttctac gaatgctgga tcaagtggct tgttttctcg
    38281 ctcttttcgc atttcaattt caaataagag ctctggtaaa tagcttttta gactgccaga
    38341 aatcgttgtc atttgacgaa tgacaggtag tggtaaattt tctagctttt ctaagagaag
    38401 gagtagtaaa tctgctgtca cttccgcatc actatccgca cggtgcggtt tatcgtgccc
    38461 aagattaaat tcatcggaca agtcttgtag tttataacta tcgatgcccg gatacataat
    38521 tctagctaat tccacagtat cgagtttttt cattttgcca agagaaattc ctgcacgcgt
    38581 catttctcgt tctaaaaatg tccagtcaaa tgacacatta tgtgccacaa aaatagtatc
    38641 ttctagtaaa ttcgcgataa tcggtgcgac atcttcaaac agtggagcat ttttaacgtc
    38701 ttttggggag attcccgtta attcttgaat aaacgcagga atcggttttt ctggatttaa
    38761 aaatgtcgtg tatgtttcca gacgttttcc tgattcaaca aagcaagcag cgaactggat
    38821 aatccggtcc tctcgtgaag cttgatttcc tgttgtttct aaatcgacga ctatatagcg
    38881 tttctgtttc atctgctcca cctctttcct tcactgcttt tattcaaaaa taacgatgca
    38941 aacaaacgag tagcttgagc agaaatccac tcaagctccc cgaactgatt ataaagtcgt
    39001 atgcgctttt tcttctggaa gaatcatttc aatatgattt ttttcatcta aaacaactat
    39061 tttgggttca tgtgttttcg cttcttcggt agtaaacatt ccgtaactca taataattac
    39121 tacgtcgcca acttggacgt gtctagctgc agctccgttt agacaaatca caccacttcc
    39181 tggctcacct gggataatat aggtttcaat tctagcaccg ttattgttat ttacaatttg
    39241 aactttttcg tttggaagca tatccactgc ttctaaaata gcagaatcaa tcgtaatact
    39301 tccaacataa tttagattgg cttctgttac agtcgctcgg tgaattttgc cattcatcat
    39361 tgttctaaac attttttacc gcctcttcac atttattaat tcattatcaa ttaaacgagc
    39421 tttcgaatat tttactgccg ctgcaatgat tattcctttg gtccagtctg ttactggtgt
    39481 aaattcagga taggaataga gcgctaagta agcaatgttc tcatgggatg gttgctcatt
    39541 tattttatct gtcatgactt ggactatttt agcctcattt gtttccccag attcaataag
    39601 ttctcgccct agttgtaaag cttcatgaat caccggtgct tcttttcgtt ctttttctgt
    39661 taaatagaca tttcgtgaac ttttggcaag tccatctgct tctctaacag tcgcaatgat
    39721 tcgtaaattt atagggaaaa agtagtcttc tactagacct gaaacaacgg ccacttgttg
    39781 agcatctttt tgaccgaaat aggcgttatc tgggttcact aaatgaaata gcttcgttaa
    39841 aaccgttact actccgtcaa aatgaccttc acgatcagca ccatcaagta cagaaactcg
    39901 tttgatgaca tgtagtttgg ttgctagttc ggttggatag atttcttcga ctgtaggtac
    39961 aaataaaata tccacgccgc cttcttctgc gagctttgca tcgtgcgctt catctcgagg
    40021 ataagcatca aagtcttcgt tcggaccgaa ctgggttgga ttaacaaaaa cactcataac
    40081 gacaaaatct gtttcttttc tcgcatggct gacaagtgtc atatgtcctt catgtaaaaa
    40141 gcccatcgtc ggaacgtaac caattgtttt attcgctttt ttttgctcta aaatagcttc
    40201 tttaaggtct tgtttatttc gaataattaa catttgctat tcccttccat aaaggccttt
    40261 taagtcttct tcagccatgg taaagctatg tttcacttct ggaaacgtcg ctgcttttac
    40321 ttcttttacg tagcttgcta gtgctggttc gattctttca tcaatgtccg catacgcttt
    40381 tacaaatttg gcgcgacgac tgattccata accgataata tcgtgataaa cgagtacttg
    40441 tccatctgtt tctacgcctg ctccaatacc aattgtaggg atagaaagtg ctttacttac
    40501 tttttcagcg agttgacgtg gaattgcttc aagtacgagt gcaatcgctc cagcagcttc
    40561 tacagctaac gcattatcca ttagctcttg tgcttcttgg gcagatttag cacgtacttt
    40621 atagcttcca gttaagccaa cactttgcgg ggttaagcca agatgcgcga caactggagc
    40681 acctgcttct gttaggcgag caattttgtt aacgacttct cctgctcctt ctaattttac
    40741 agcatgagcg ccactttctt ggataatctt ccgtgcattt tggatagttt catccactga
    40801 accatgatac gtcataaacg gcatgtctgt aacaacaaat gtatctggtg ccccgcgctt
    40861 cacggctttt gtatgatgaa tcatatcatc catcgtaact ggtacagttg aatcgtagcc
    40921 taatactacc attccaagtg aatcgccgac taaaatcata tcagcttctg cttgttctac
    40981 attcttagca gaaggatagt catacgcggt tatcatcgtt attttctctc cgttttcctt
    41041 catagcaaaa aaatctactg gtcttttcat tttcttagct ccttttcgtc cctgttaaat
    41101 tactttaatc aaggcaaaaa acatattttt ttagtagcat tagtatgatc cggtaaaggt
    41161 atcatccatt cattgctacc atatgtataa taacataaat agatgcttac ttaaagtatg
    41221 taaattgaag agaggcctac tctgaaacct ctccacttac tttattcatc caattcgtta
    41281 atttcgccgg ttcatccgtt gctgcatagg tagacgctac ttttccatct tttaaataaa
    41341 ccatcgttgg gacagaatcg atgtccattt tttctaaaag agcaatcata tcatcgcgac
    41401 tcttttcgga ggctttatct gtgttataat aagccatttt ttggtctggt tgtctttttt
    41461 taagttcttt ctttaacata ggttgaaatg cttggcaatc ttcacaggtc ggacgcccaa
    41521 cgtaaacaaa gccagttgtt ttatcggcca ttttttgctt gaaatctttg gtggaaatgg
    41581 ttgttagaaa agaggcgctt tctttttctg tttgatttgc tttctcttcc gtttcttttt
    41641 tattatcgcc gcatgctcca agtgtaagga ttacggtaat tgatgttaat agtaatagta
    41701 tttttttcat ctaaacagct ccttcgcatt tattgtactt gatttttccc aaaaaagaaa
    41761 aacccgaaaa agtgattttc acactatgtt ttcgagttaa aagatatgtt tttgggtatt
    41821 ttattagggt taaaacgttc ttttctatag tgtttcgtta tttttcatta tctagcaaaa
    41881 tatctgcgga atagattgaa tgtacttcac cgagtgcgtc ttggagtaag agtacacctt
    41941 catcagaaat cccttttact tgtccatgaa ttttgccttt tgttgtgcta gcagttaatt
    42001 tttcgccaaa tgggattgct ttggtttccc aaagtaattt tatcggtgcg aatcctttat
    42061 ctagaaaaag ctcataatat ttttctaaag aagtgagaat ttcttgtagt aaagcttttc
    42121 ttgagacgct ttcgcctaat tccagtttca gagaactcgc tttgtctttg atttcttctg
    42181 ggaattcctg ttgatttaca ttgattccca tgccgataat tactgcatga atcgtttctg
    42241 cctccgcttg catttccgtt aaaacgccac agatttttcg tttaccaatg taaatatcat
    42301 tcggccattt gattttcggt tcgagctttg tgctattttc aatcgcttct gtgattgcga
    42361 gtgaggcgat aaacgtgaac tggggtactt tttgaatagg gatttgtggt tttaaaatta
    42421 cactcatcca aataccttcc ccttttttgg aactccaagg gcgaagcaag cgaccttttc
    42481 cagctgtttg ctcatcggct acgataacgg ttccttcagg gctagattcg atttgctgat
    42541 gggcgatgat ttgtgtagag ctaaccgatt catggatttc caaatgctga ccgataaatt
    42601 tggtttctaa accgagtagt agtgcatctt tcgtgtactg ttctgctgtt gctgacaaac
    42661 ggtaaccacg gtttctgact gcttcgattt caaatccttc tttacggaga gcttccattt
    42721 gcttccaaac ggctgtgcgc gagcatccta gactatccgc aatttcttgc cctgataaat
    42781 aagtaccatc actttctgta aataaagcaa gtaatttttc tcgattattc ttcatgatag
    42841 cctagccacc ttttaatctg aattttttca ttgtttattt cattggaaag gacaccacat
    42901 tccactttat caagcgtctc ttttacccat ggacctgcgc tttctccaga ccattttaat
    42961 aaatcagctc cagtaatagc taagtctttt ttggagtgaa ttggtaacgc ctcgtatgct
    43021 tgacttactt tatgttggtt gttttcttgc cctcgaataa catttagttc atttactaat
    43081 gagaaaactg ccttgccagc atgataaagt tcttctgtta gccatgtctc tttcatgttt
    43141 agcgcgtatt gatatgcttt attcacaagt tgaattgttt tattgggtaa tttccaagct
    43201 ttaagaaatg cgttaacatt gttaggtttg acagcaacga cgagtccaag ccaaatcgat
    43261 tcttcggttg ttcgtttttc ccagtcccaa ctagcaaact cgcttagtgc tgatttctcg
    43321 tcttttaagc ctggtaaata agtttccatt ttgactttta aaagtagttc tatcgcacgt
    43381 tttgctgctt tgcctttcat catttttagc cattcaaccg taattcgttc aacggaagta
    43441 tgctgtaaca actctatttg gctttctaaa gctttttcgg tttctttatc aagctcaaag
    43501 tcaagttgac tcagaaagcg gactgctcgc atcattctaa gcgcatcttc atgaaaacgt
    43561 tcggaggctt taccaactgc tttgatttct ttattttgaa tcgctagttg cccagaaaac
    43621 gggtcttgta gcgcaaaatg ttcatccatc gcaatggcgt tcatcgtaaa atcgcgacgt
    43681 tttaaatcct cttctaggga gcgaataaag gttacctcgc ttgggcgcct gaaatcttca
    43741 tacgtccctt ccgttcgaaa agtggtcact tcataaaatt cattattttc tctaactgta
    43801 acagtcccat gtgcaatccc agtgtcataa cttgtctgaa aaatctcttt tacttcttct
    43861 gggaaagcac tagttgcaat atccacatcg gaaatcgttc tatttagcaa gtaatctctg
    43921 acagatccgc caacaaaata cgcttcaaaa cccgctgtag ttaatttttg caatacagga
    43981 agcgctttta ggaaaacgtc attcatctgt catcgctcct ttattcatca ttccgtctta
    44041 agtctcgcca atctaggaaa ccagctccta aaccacgaat taaaatttct gctgtgccaa
    44101 tatttgtcgc taaaggaatt tcgtatacat cgcataatcg aataagcgcc gtcacatctg
    44161 gttcgtgagg ctgcgcagtg agtggatccc gcaagaaaat aactaagtcc attttatttt
    44221 ctgaaatccg cgcaccaatt tgttgatcgc caccaagcgg gcctgattta aaacgatgta
    44281 ccgttaagcc agttgcttcg ataatgcgta aacctgtcgt cccggttgca tataattgat
    44341 gcggttcgag caaatgttta tatgcagttg caaatccaac catcaaatct ttcttttcat
    44401 cgtgcgcgat taatgcgata tgcatctcat tcacctatcc ttagtctaaa atattttcta
    44461 agccataaat aagtgtttca agttcttttg ttttacgtac agaaagtgcc acgccagaca
    44521 taaaggaaat tcgatcataa gagtcatggc gaattgttaa tccttgtccc tctgctccaa
    44581 aaatcacttc ttgatgtgct acaagtcctg gtaaacgcac actatgaatt cgcatacctt
    44641 catattctgc gcctctagct ccttcaataa gttctacttc atctgctgca ccttgtttaa
    44701 cgaattcacg cgtttctgcc atcatttccg cagttttaac agccgtacca cttggcgcgt
    44761 ctaatttatt gtcatggtgc aactcaataa tttcgacgtt cgggaaatac ttagctgctt
    44821 tttgtgcaaa ttgcatcatt aaaacagcgc ctacagcaaa gtttggcgca attaaagcac
    44881 cgattttttt cgattctgca attgatctta gttcactaat ttgttctggt gtaaaacctg
    44941 ttgtaccaac gaccgcacgt acgccgtgtt ctaaaatcgt tttcgtgtta ctatacccta
    45001 ctttaggggt cgtaaaatca acgacacaat ccggttttat ttcttctaac atctcgctta
    45061 aattaccaaa aacaggtaca tctaacgagc taaattccac tatttcattt atattttttt
    45121 cttttggttc atggtcaagt acggctacta actctaaatc tgcttctctt aaaacagttt
    45181 tgacaacctc gtgtcccatt cttcctttaa atccagatac tgctactctc attttgcttt
    45241 ttcctccttt tttgtccaac gatctttatc gcgttcttta aattttgcca tgaccgtatc
    45301 gtgtgctttt tccatatcaa tatcaagtga gttggccatg caagtaagaa caaaaaggca
    45361 atcacccagt tcctctgcta cagttttagt aggttcactt gttttcttcg gtttttcgcc
    45421 ataataatgg ttaatttctc tggctagttc tccggtttct tctgtaattc gggccatcat
    45481 tgctagtggg gaaaagtaac cttcctcgaa tccaccaatg aaatcatcca cttctttttg
    45541 tatttctgcc attgttttcg ccatcggttt tcccccttta tgtggtaaac taaaatagat
    45601 tttaagacta attgttaact tcatttcatt atacctaaac aaatacgtcc aagtccatga
    45661 ttttttactt acatattaaa taggtttcag ggaggaaaaa agttatgcta aaaacattac
    45721 gcacgaaaaa tatttgcttt attatgcttg gtacggcgat ttacgcattt ggcttagtta
    45781 attttaatat cgccaataac cttggtgaag gcggtttagc tggagtaacc ttattccttc
    45841 ttcacttctt ccaaattgat ccagcgtact ctaacttaat tttaaatata cctttgttta
    45901 tattaggttg gcgagttcta ggcaatcgtt ccctcattta tacgggtatc ggaacggtga
    45961 gtttgtcctt atttttatgg attttccagc gaatacctta tacgctagat ttacatagcg
    46021 atttactttt agtcgccctt tttgctggtg gctttagtgg tattgggctt ggcctcgtgt
    46081 ttcgctacgg tgggacgact ggtggtagtg atattatcgc caaactgcta aatcatacga
    46141 aaggcattag catggggcgc acgctatttg ctattgatgc aattgttctc gttgcctcac
    46201 tctcctattt agatgtccgt caagttatgt acacgctcgt cgccgtattc atcggctctc
    46261 gcgtaattga ttttgttcaa gaaggagctt atgcggctcg cggtgcgctc attatttcta
    46321 aagataatga cgcgattgct tcccatgtga tgctcgcgat gaatcgcggg gtgacagtgt
    46381 tggaaggtcg cggtggcttc tctaaaaaag accaagacgt cctttatatc gtcgttgcga
    46441 aaaatgaaat aattcaatta aaaaatattg ttcaagcaat tgacccacat gcctttgttt
    46501 ccgtcagtgt cgttcatgat gtgatgggag aaggtttcac actcgatgaa aacaagaatc
    46561 ctatctacta atgtatttac ttggctcata gttttctaaa gccaaatcga cggtgtttcc
    46621 aagtgctaaa tccgctaaaa gtttgccaac ataaggcccg gtagttaaac cagaagcacc
    46681 aagaccattc gctaaaaaga ctgactcaaa tccaggaagt tgaccaataa gtggcgcaaa
    46741 atcaggcgtg tatggtctag ttccgaccgc cacatgggcc actttactcg ctaaatcccc
    46801 ttccataaac tggctgactt ctgttagtat ttctgcctta ccttctactg ttggtttcgt
    46861 atcgaagcca gcagtttttt catgcgttgc accgacgata attttcccat tatcaaaagg
    46921 aacaattgat ttcgcgctcg gtggtaaaat tactggccat tcatccgttt gaaattcgct
    46981 aaaatcaagt tccagcaatt gccctttttg cgctaaaact tctgtatgaa aactcgcctc
    47041 gtctagcaat tcttttaacc aagcgcctgc tgcaatgatt aatttgtcgt aatgttcatc
    47101 ttccccgtca acacgaactt ttccgtcagt agaaaaatgc gctcgccccg acttgatttt
    47161 taccccattt tcttttgcgg cataaagtag cctttcacaa aataaactac cgttcactcg
    47221 tgctgctccg cttacataga ccgagccaaa tcccggttta actaacggaa atttttgctt
    47281 tgtttcctct tctgacaact ttacaatttc acccataact tccgcatcga ggcgtcgttc
    47341 attcgcaaga ttaaacagtt ctgttacttt ttcttctgtc tttcgaagtg cgagcacacc
    47401 aacttgttta tagcccgaat tccgcccagt atctccttcg agcgtccccg ccaattcctt
    47461 ataaaaggcg gcactatttt ttgcaagctc ataccaatat ttgtttcgcc ttttagaaag
    47521 ccacgggcaa attattccgg ctgcagcacg cgttgcttgt cccggttcat ctgaatcaat
    47581 tagcgttact tgcacgtttt cttttgacaa taaataggcg gcactagctc caacaattcc
    47641 cccgccgata atcactattt tttgcatcgt tacacccctc tatatcaatt gtgacacaag
    47701 ttgacttttt tataactctt tgtaataata tgtgaaaata gttaagttta caaactacta
    47761 aaaatcctct acatcattct atccattgta ctgaaatcca gctttaatta caaaaaggca
    47821 gattttagct tatctcgtcg tcattaccac atatcctctt agagaacgct ttcgcccatt
    47881 ggttggttct ttgtactgcg tctcagctaa aaattcattt atttttcctt ctgcctatat
    47941 taacagttca gctgattagt tatgctgaga tatgggagat ttttttatgc caaatattct
    48001 tgattcatta tggaacagca tggcgctttt tttatcagcg cttttttttc acggaatggc
    48061 actgcgatct attagagaaa aaaagcctgc ttggttccaa attaaatttt ctaatgaaat
    48121 tattaattat gcactgggca tttactacgg ccttctaggt gtttatttta ttatccgcgg
    48181 attacccggc acagattctg ggatttatac agatatgcta cttaatattt taattgtcct
    48241 gcatttattt tcttcggcag gtcctgctac tatcgcacta ttactaattg tcgcaggaaa
    48301 actttttctc ggtgatgcgc tgtttgccaa tttgatttac gcgtttttaa ttatcggttt
    48361 tcactttgta tgcatggaag tcgctaaact tcgacttagt tccgttcaaa aagtcgtttt
    48421 agtcaaactt agtgcgattc cccttatgct attttattta catcaaaaaa tacatttatt
    48481 gtataccata aatgacttac ctgtttggat actctatttt ttggtttctt tttttattac
    48541 gtttattatt gtttcagcgg cttattatat cgatacatcg aataagctaa tttatgattt
    48601 gcagcaatcc accatccttg acccgctaac aggtttgacg aatttccgtc attttgaaaa
    48661 ggcgttcgaa gcagcattta accatgctac gttaaaaaaa tcgaatctaa gtgtgattat
    48721 tattgatatt gattatttta aacgggtaaa tgatacatat ggccatttag tcggaaatgg
    48781 ggttttatct acttttagtc aaatgctatt aaaaatcagc ttcccgccaa acacattgat
    48841 atcaaggatt ggcggcgagg aattcgccat tattttgcca aatattaatg tcagtgaaac
    48901 ggagcatttg gcggagaaaa tccgacgtaa agtcgaaaaa attgatgttc cgattgttgc
    48961 ttctggctcc gttattacta tttctgctgg tatcgcaaat tatgacggca gaaattatcc
    49021 aaatccgaac gagctactaa atgcagccga tcaagcgcta tataatgcga aacgaaatgg
    49081 acgaaaccaa gtgcatattc gcgaaacaga accagttgtt taagagagta aaaaggagat
    49141 gagtccattt gttcgaacta gttaattcat acatagatag tttagcgctc tttctcgcta
    49201 tcctttttat ccaagggatg tcttttcgaa aaataagaca atatcgccca aattggtttc
    49261 aaaatggtgg tagacggcta tttctttcca tcctactagg cgtctactat ggtttagcag
    49321 gtatttattt tatttatgaa ggtgcttacg aaaataatcc cgttatttac acgaatatgc
    49381 ggattttgat tttgatggta acaagtgttt tcggtggccg cgttccactc attttcgcct
    49441 atttagtaat gctttttggt cggattagtt ttgatattgc ttctcctgtt actagtcgct
    49501 atgtcatttt gatgacgctc atttttgccg cgtgtttact tgttactttt tggaaaaaac
    49561 aacgcttttc gagatttgtt gctttaatca ttttaaactt cccagcgatt ctttattatt
    49621 tcgtgaataa ttttgacgaa ggacgaatcc tgcaaggttt tgagattatc gagtatttcc
    49681 tgctattctt tgtaaccgcc ttactggtat tttacgcctg caattacatt gataaaagta
    49741 atctcgttat ccaaaatttg acggaaactg cgatgacgga tagtttaact aatttaccaa
    49801 acatgcgctt tttcacccaa cagtttggtt ggatttttgc gaaatcgcaa aaaaggaaaa
    49861 aatctttatc tcttttcatc attgatattg atcattttaa agaaataaac gattttcatg
    49921 gtcatcaagc tggtaatacc gttcttgctc agtttagtag cattcttaaa aatcgcacct
    49981 tcccgccaag aaccatgttt gcacgaattg gtggcgaaga atttgctgtt ttacttcaaa
    50041 acgttggtac agagcaagct gctttaattg ctgatttttt ccgtgaagaa gtggaacgag
    50101 cgaagtttcc ttataatccc gcaagtggca aagttactgt atctataggt gttgcttctg
    50161 ctagttccaa cttttcaaca accgaatcac ttttcgaagc tgctgaccaa gcgctctatc
    50221 aagcaaaaca aaacggccgc aatcaaattg ctgttcatca gggggaactc gaatgaaacg
    50281 attcatctta attttcattt taattatcct tattggcgcc ggatttttct ttttccttcg
    50341 tccagaacct aaaaaaacag tgagtgcacc aaaagaaacc acacccactt ccacctctgt
    50401 tcaaacgtat gtgaaagaaa actatactgc aaaaaacggt ttaattgtgg attacaaaaa
    50461 tgcgcaagaa ccgcattatt tagccgaaag catcggactt tatatggaat atttggtcga
    50521 agtgaatgat agtaaaactt tccaagaaca agtaagtcat ttagaaaaga attttataac
    50581 cgaagataac tttattaaat gggaagcaac cgacgcaaca acgactaatg cgattgtaga
    50641 tgatttccgt attacagaag cactttatca agcgagcgaa aaatttattt tcccgtccta
    50701 caaaaaaatg gcagataaaa tcctagccaa caccaaaaaa tatagcgctg aacaaggtgt
    50761 tccagtagac ttttacgatt ttgttcataa gaaaaaagca gatacgctcc atttaagcta
    50821 tctaaatatc caagcgatgc aacagattaa ttatcgagat aaagcctatc taccaattca
    50881 aactgttaat gctgacccat tttttacaga agtgtttcaa aatgaacagt ttcaatatgc
    50941 tgaccctagt gaagttaata tgattgatca aatgctcatt gcgatggctt attttgatga
    51001 aaatggtgat gtagagccaa atttcgataa ttttttacaa acagaattag cttctaaagg
    51061 aaaagtttat gcacgttatc aaagagaaac aaagaatcca agttcagaaa acgaatctac
    51121 cgccgtttat gcctttttga cacagtattt taacaagaca aatcaagcta aaaatggtaa
    51181 aatcaccaaa gagttattag agaaaatgga cacgtcaaat ccagaaacaa cccatttttt
    51241 cgattatata aataaagaaa taactcttaa gaaataacgg aaagaagttg gacaaatgaa
    51301 aaagcccact gtacgtgaga ttattgatca aaatcacttt gatacaatat atgaaccgat
    51361 tgttgttgta gaaaacacac aaattttcgg atacgagtca ctcacccgct taaaaacaga
    51421 tcactggaat gcgattagtg attttatcga agaagcggaa caggatggtc tgcaaaaagc
    51481 atttgagctg ctcacgcttc ataacgcagt gaaacgcttt aacaaaagcg gagacacgcc
    51541 actatttgtc aatatttcgt atgatacatt tttagaaaat caagaagagt tgcacgatac
    51601 cctacttgat aacgggaaaa tagtttttga atttttggaa acatccaagt taccacaaga
    51661 acgaatgaac gacttagaaa aacaactgct tcaattccag aaaaaacacg aaactaaatt
    51721 tgctattgat gattttggct ccggttatgc ggacttgcat cgcgtttttg cgcaccattc
    51781 tgattttgtc aaaaccgatc gcttattact acgagattta tttgagagcg atggcaaaaa
    51841 aatcttcttt gagcaacttc ataattatgt taaaaagcat cataaatcct taattgtcga
    51901 gggagtggaa acaaaagagc agctagaatt ccttcaagaa atcggcattc cctatgcgca
    51961 aggttattat tttcattaaa aataaaaaag aaaatctgct tattgtcagg ttttcttttt
    52021 gtttggaatc agttgttatt cttctttccc ccatgtaaaa tagaatagaa taaaaaggag
    52081 tgctgaaaaa tgactgtaaa accaggtttt gactatatga ataatccatt attaaataaa
    52141 ggaaccgctt tttcaaaaga agaaagagca agctatcaat tggacggatt actgccacca
    52201 attatcgaaa caattgaaca acaagccgtg cgcatcgaga cgcaaataga aaatttagaa
    52261 acacctttac ataaacatca gcttttaaca aacttatata atgaaaatcg caccctctac
    52321 tattatgtcg taacaaaaaa cgtgactgac tatttgccaa ttatttatac accaactatc
    52381 ggcgacgcag ttatccagta ccataaagaa tacactgcgc cggatgaagc cttatttatt
    52441 gatgcctttg cacccgaaaa attaagcgca tcaataaaaa actacgcaaa aaataatccg
    52501 aatattgata tgattgttat aacagatggt gagggtgtgc ttggaattgg cgactggggt
    52561 gtgaatggtg tgaaaatcgc tgttggaaaa ttagcggttt atacggttgc agctggactt
    52621 gcaccagacc gtgttctgcc agttgttatt gacgccggaa cgaacaacga aacacttctt
    52681 aacgatccac tatatctagg aaataaacgc ccccgccttt cagaaagtga atatgacgct
    52741 tttattgctt cttttgttaa tgttatgaaa gaagttttcc cgaaagccat ccttcactgg
    52801 gaagactttg gacgcgcgaa tgcaagtcgt attctgcata attaccgcga taaaatttgt
    52861 acatttaacg atgatattca aggtacaggg gccatggtgg ttgctgctgt tcttgcgacg
    52921 atccaagttt ccaaaatacc attaagcgag caaaagatta ttattttcgg ggctggaact
    52981 gctggaatcg gtatcgctga tcaacttagt gctcagtgga tgcgtgaaac tggtcttcct
    53041 tttgaatcgg cgaaaaagca tttttattta gtcgaccgaa atggtttagt gcttgataat
    53101 atgaccgact taactaccgg gcaaaagaaa tatgcacatc cgtcgactga gtggtctaac
    53161 gtgcccacag atacgttaga aaacttaatg gaagcagttc atccaacaat gttaatcggc
    53221 tgttctggtg tcaccggtgc ctttaaagag agcatcgtca aaaaaatgac ccagtataca
    53281 gaacgaccag cgattttgcc actttctaat ccaacaaaat tagccgaagc aactgcttct
    53341 gatttaattc agtggacaga tggaaaagcg cttattgtta caggtagccc ttccaaacca
    53401 gtagaatatc aacatactac ttatgaaatc ggtcaagcga acaatgcact tctctatccg
    53461 gggctcggac taggtgctct tgtcactcgt gcgaaatata ttacagatgg tatgctcgct
    53521 gctgcttcca tggctgtcgc tgagcagatt tcaccaaaca aagcaggcgc agcccttcta
    53581 ccacatgtgc gcacccttcg cgaaacatcg cgtgcagtag ccatcgctgt cgctaaccaa
    53641 gctattaaag aaaacatcca tcaagtcgaa ttaacgaatg tcaccgaagc tatcgagcgg
    53701 gaaatgtggc aacctattta taaaggagtt tagatatgtt ttacaaaacg aagcaatcac
    53761 tagatcaact cgtccaaaac ggctccactc cgggaattag ttatcaaata aaaactaatt
    53821 atctggaaga aaataacatc atgggattaa aatccgtttt tccagaagca gaaatcttac
    53881 caagaacaac agaaaacatt tatgatatcg cttctttgac caaagtaatt gctacgacta
    53941 ctcgtatttt gcaacttatc gaacaacaaa gattccaatt aaacgaccct attcaaatgt
    54001 atttaccaga tttccggtac aataatgtta cgattttaca tttactaaca catagctccg
    54061 gccttgcaca aaatatccct aacttctcaa tgaacaaccg agaggacgtt attcgttatg
    54121 tgtatgccac gccacaaatt aatattcctg gaaccgtagt cacatacgcc gatgctaatt
    54181 ttcttttact cggttatttg attagtaaaa tggacggcaa ttatgaaaaa gccatccaaa
    54241 acaatatttt agaacccctg agtatgacaa atacaagttt tcatcccgca aataaaaaac
    54301 aagtcatccc aaccgaactt gaccaaacgc gcggtttaat tcaaggtgat gtccatgatt
    54361 ttaaagcttg gactgccaaa tcaggcacag gccatgccgg actttttagc accctaagcg
    54421 atctttccaa attccgagat gcgctcatgc tacaacacgg tgctccaatt ctttctgaaa
    54481 aaacttggca actgatgcaa ataaatcata cccctggtct caatagaagt cgcgggctag
    54541 gctgggatct acgcggtgat tctgtcttat atcataccgg attcactggt acttttatgg
    54601 tgctcgattt gaaacaccaa gccagtttaa ttgttctttc taaccgcgtt catccaagcc
    54661 gagccaaccc aaatttcgtt gacaaacgtg acagcattgt cgacactttt ttagaagaag
    54721 ttgcaaacac aacggaagtc tagcatatta gctaggcttc tttttctgcc ttttgcctcc
    54781 cgccctactt cgataaaaac tgtattaaca cagctgttga aagccttttc tagttatata
    54841 aaagaaattt attttctttc tggttttata ttgttttcgt tttcacaaag gagtatgctg
    54901 ttcaatgaag aaagattcta aagacttgtt tctggcttta agtgaaaagg aacacaattg
    54961 aaggaggaaa ttataatgac aaaagcatgg gatggtttta aaggaaccgc atggcaagaa
    55021 aacattagtg tagggcaatt cgttcaagac aactacactc cttacgatgg cgatgaaagc
    55081 tttttagaaa agagcacacc aagaacaacg aaactaaatg aaaaaataaa taaactagta
    55141 gaagaaatgg atgcaaaagg cggcgtactt gatatggata acgctatcgt atccaatgtt
    55201 gcatctcaca aagctggtta cgtggatcaa gaaaatgaag ttattgttgg tttacaaaca
    55261 gacaaaccat tcaaattagc atttatgccg aatggtggtc ttagaacagc cgaacaatgt
    55321 ttaacagaca acggctattc cattgatcaa gaattacatg acttctacgt aaaaaatcgt
    55381 tctacagcaa atgatggtat tttcagagca tatacagacg atatcaaacg tgcgcgtcac
    55441 tcccatatcg ttagtggtct tcctgatgca tactctcgcg gaagaatcat cggcttgtac
    55501 caaaaaccag cactttacgg tgtggatcgt ttaatagcag aaaaacaaca agacttgaaa
    55561 aaaattgcga tttcttctga tgaaaacatt cgtttacgtg aagaaatttg gttacaaatc
    55621 aaagcactta aagacttaat cgttttaggt aacgaatacg gtttagaact tggacgtcca
    55681 gctgaaaatg caacagaagc ggtacaatgg acttacatgg gctaccttgc ttctatcaaa
    55741 caagcaaacg gtgctgcaag ctcattcggt cgtattccga ttttccttga tatctatatc
    55801 caacgcgatt tagaaaaagg cattatcact gaattcgatg cacaagaatt aatcgaacaa
    55861 ttaaccctta aattaagaat ggttcgtttt gcaagaacag atggttacaa cgaactttac
    55921 gcttccaatc caacattcgt tacaacttca atggctggta tgggcgcaga cggtcgtcat
    55981 cgtgtgacta aaacagatta tcgtttctta cactgcttag ataacctagg aaactcagca
    56041 gaaccaaact taactgtcct atgggatgct cgtttaccag aaagctttaa agaatattgt
    56101 atgaaaatga gtgtaaaaca ttcctccatt caatacgaaa atgataaatt aatgcaagaa
    56161 gaaggctacg gcgatatgca atgtatcagc tgttgcgtta gcccacttaa cccagaagca
    56221 gacaaagaca aaggtgaaac acataacctg caatatttcg gtgctcgtgt caacgtactg
    56281 aaatgtcttc ttggagctat caacggcggt aaagatgatc ttcacaaaaa ccaagtattc
    56341 gacgttgtag aaccaattac aaccgaatac cttgaatacg aagaagtact agaaaaattc
    56401 gataaatcaa tggactggtt aacagacact tatgtagatg cgatgaacat cattcacttt
    56461 atgacagata aatacaacta tgaaagtatg caaatggcct tcttaccatc taaagtaaca
    56521 gccaacatgg gcttcggtat ttgtggattc gctaacgtag tagatagcct aagtgccatc
    56581 aaacatgcca aagtaaaaac tatccgtgac gaagatggtt ttgtatatga ctatgaagta
    56641 gaaggcgact tccctcgtta cggtgaaaat gatgaccgtg ccgacgatat cgctgtaatg
    56701 gttcttaaaa tgttcaaaga caaattagac tcccataaac tatacaaaga tagtgaagca
    56761 accgtttctg ttctaacaat cacttctaac gttgcttact caaaacaatg tggtaactcc
    56821 cccgtgcaca aaggacctgt atttgatgaa aatggcaaaa tcgtcaaaga accagaattc
    56881 ttcagcccag gagctaaccc ttctaacaaa gcaaaaggtg gtttcttaga taaccttgct
    56941 agtctttcta aattaccatt ccactatgca aatgacggaa tctccttaac aatccaagga
    57001 gctccaaaaa tgttcggtaa aacaacggaa gaacaacacc ataaccttgt tggtattctg
    57061 gatggttact ttacaaaagg tggtcaacac atcaacttaa acgttcttaa ccacgatgaa
    57121 gtaatcgaaa aaatcaaagc tggtatccca gtaatcttac gtatcagcgg ttattgctta
    57181 aatacgaaag atctaaatga agaacaaaaa atggaacttt gccaaagaat gttccacgaa
    57241 aaattaatcg gttaataaga aaaaaagaac caaatctgcg aataacagat ttggttcttt
    57301 ttttatgcgt tcgaaacttc cgccgcataa gctcctgccg tgtgcccagt cactagcgca
    57361 caagtaatat tatatccacc cgtataacca ttaatatcta gtatttcccc gcagaaaaat
    57421 aatccttcca tcaacttcga ttgcatctct tttggtttaa tttcctttac agaaacccca
    57481 ccacctgtca caaacgcttt ttcaaaatca agcgtgccat tcacttcaaa agtgaaatct
    57541 tttaataact gaataaactg ctcgattttt ttcgggctta cttgtttata atcagccgtt
    57601 tcatctaagt ctgctttttc aagtaaaaac aataacattt tctcttgtaa aagcgaactt
    57661 aacgaatttt tcaaggcttt cttcggattc tcttctaaca atttatacac atctttcgaa
    57721 agttccgcag cggatacatt cgggaataaa tcaagacgca tcttcaccgt gctagcgcct
    57781 gttttcttta attctcgaag gacgaacata ctacaacgaa gagccgctgg tcctgacaca
    57841 ccaaaatgcg tgaaaatcat atccatttga tgcgtaataa tcggcttccc ttttgcattt
    57901 aaaacagaaa gggacacatc acgaagcgac gttccttgta acactttttg tttaataaaa
    57961 ggctcactag acgtaattgg cacttctgtc ggataaagtt ctgtgatggt atgtcctgct
    58021 tttttcgccc aagcatagcc atctccggtc gaaccagtcc gtggaacaga tttaccgcca
    58081 actgcaacaa tgaccgcact cgctgaaatt tcttggccgt ctttcagcgt cacccctttc
    58141 acatgtccat cctcataatc cacttgtttc acggctgttt gcatgtaaat ttttacgcct
    58201 agtttttcca tccgctgaat cattgcctca gcgacagaac gcgcgctatt cgatacagga
    58261 aacattctac cgtggtcttc ttcttttaac gccacgccaa gtctttcaaa aaagcgaata
    58321 atatcttcat tatcaaaggc atgaaacgca ctatataaaa agcgaccatt accaggaata
    58381 tgtttaataa tttcttctgc tggtcgcctg ttcgttacat tacaacgtcc gccaccagac
    58441 ataattaatt tacgtcccaa ttttggtcct ttttcaatta atagtactcg tttatttttc
    58501 tctgctgcac tgatagccgc cataagtcca gatggcccgc caccaataac aattacatca
    58561 taatccattg tcccgctcct ttactttatc cgtgtttaag tatagcaagc attcggctca
    58621 gtgccaagct tttttcacca aacaaaaaac ccaagaaaaa tctcaggttt tttgattcta
    58681 atttcgattc atattcgtaa agataagtag caatcttaga agttctagta cagctacggc
    58741 cattgcagca acataagtca ttgcagcagc acttaatact tttttcgctt gtgggagttc
    58801 tgaagatgcg actagtccgc cgctttctaa ttgaacaagt gcccgtttac tagcgtcaaa
    58861 ttcaactggt aacgtaatta attggaaaag tacacccact gccatcaaaa taatccccag
    58921 caacatgaaa ctagcaacgt ttgcaagcat tccgataatt aagaacaccc aagaaatatt
    58981 ggaactaaac attgttacag gaacaagcgc cgaacgaaaa cgcataaatg cataatcttg
    59041 ctgatcttga atcgcgtgtc ctacttcatg ggctgcaaca gctgccccgg cgatagaacg
    59101 accgcggaag ttagcttcag aaagaaaaac cgcttttttt cgaggatcgt agtggtcact
    59161 taatattcct tttgtttcat gaactggaac attcgttaaa ccattggtat ccaaaatatg
    59221 acgcgcaacc tcggcaccag ttaaaccatt tgccacacca actttggaat aatgtgcata
    59281 ggtagttttt acccgatact gtgcccaaag tggaattgcc gcgacgataa taaaataaat
    59341 aatatactga ctaaacgaca tttaatcatc ttcctcctac tacttttttt cggtgaatat
    59401 ccttatgttc ttagtataaa ttaactatca ccaagactca acctctttca ctcatcatga
    59461 ggaaattcta atgttaagtg cttatttttt atcgttttat catatacaaa ccatagaaca
    59521 aataccgtta accaaaatgt cgcataacca atttccggta agtatttttc taaccccata
    59581 taaatcggca tttggccaaa tacataatca attacatcat tatgaaatac ccataccgct
    59641 gcaatcataa agtgcccgat tcgaaaacga taaaacggcg cataaagaat tccttctact
    59701 gccataaaac catgcgtcaa aatcaatgcc acagagcccc aaacaagcat cccttggtca
    59761 atcatataaa aaatattcat accaactgcc cataaaccat acttcactaa acatacaaaa
    59821 cctagtgcct ccattaaagg ccaatgcttt ttcccaagaa aagcaactag cgccaaagtg
    59881 aagaacaaaa tcgccgttgg gctatcaggt acaaacagcc aaaagcgcgg ctctgtcatt
    59941 tgtaattgcg gtaaatacca tatgtatcca taaatcgctc caagtaaatt accaaagaaa
    60001 agtaatcgta aaaaggcccg atttgcgagt aaactatata acaatatccc ccagctccct
    60061 taaaaaatcc tagcacagca aggaaatgat gcatctttca catcatttcc atactaacta
    60121 ggatttattt cttattcttt ttccgtatcc atttgctgta aaattcgaac taacttatga
    60181 aaagcagctt catcacgtgt atccagcgcc tcatcgatct gttgtaatac tttttctctt
    60241 gaaaattggt gcacagattg ataaataagc gcatccgcca tttctttttc ctcatccgca
    60301 agcttcactg ctgtaaaagg attatcttca cgaacaagtg cgtattcagg cgaagacatt
    60361 gcctcttcaa aatgaagttc tacatacaac tcttcgtccc aatttaaccg aatatcatga
    60421 aatgcttttt ctggatcagt cgtcataatg ttacctttaa aaaataggaa cggttcggat
    60481 tcaacgccgt gagcactaag tgaaagccca cgcgcacacc cttccaaatt atcaacaaaa
    60541 tgaacatatt ttacaatttg atcatggcca gcaatataat ttaaaaccca cattgcttct
    60601 ctagtcttca tctggtgttt atttaaaaac cagcgaataa aatctttctt ctcgtctatt
    60661 gaaatggatg ccttcatctt tcctcagtcc cttcctgtat tctttttagc atttaatcaa
    60721 ataaagataa aatctctgtg tcttctggct ctagttctaa atagttacgc aaaacttctt
    60781 gtgatttcgc gtactctcct tcttccctta aaaataaacc atattccttt aagaaagtag
    60841 gattgtttgt aaagtgcgag tatgccagtt cataatttgc ttttgcttta ttatattgtt
    60901 ctgtttcctg atatgcaaca cttacgtccc agaaaatttg tggttccgaa ataacttctt
    60961 ccccaaggcc ttccactaat tcgataaccc cttcgtagtc ttctttcgca agtaataatt
    61021 tgttcaactg cataattgct tccgaatatt cttcatctag cacaattgct tgacgataaa
    61081 attcttcggc ttcttctggc aaacgtagcg taacagcaag cttcccagcc tctaagaaca
    61141 tttctttatt aaattcatct tgcgttaagc cgtcccgaag cactgcaatg gctttttccg
    61201 gttcgccgtt ctcctcataa cttttcgcta aataagagta gagcgttgtg taagagggat
    61261 catgttcacg caaatgttcg agcgcatgaa tagctttcgt gtaatctttt gcctgataag
    61321 ccgttaaacc catcccgaaa agtgtatcaa ccgattcctt atcttcgagc gcgcgttcat
    61381 agtaagataa cgcttcttca aatgccccac tagcagcaaa agcttcagcg atacgttcat
    61441 atacagacac cgcaccattc gaaataatcg ttaatcctgc ttctacagca gtttgataag
    61501 actgtacagc ggatgcgaat cttgcttgcg ataaataata ttccccaagt gcaaaatcaa
    61561 taatcggctc atttggcgcc atttgtttcg cttcgagtaa tttctgctca ctgacttcga
    61621 ataaaccttg catctgatat aaatcagcta atacgagcaa actttcaata tatgcttcat
    61681 cttctttgtt tactttttct aaatagtctt gcgcagagtc gatatcgtct ttttcaagtg
    61741 ctacttcagc tgcacggaca agcaactcgc cctcatcctt gtattttgct aatagaagtt
    61801 cgtataaatc ttccgtttca tctaggaatc caagtgtaaa taattcttct gctaaataat
    61861 attgttcttc atctgttccc gcttgcacta cttcatcaaa atatttcttc gcaagcgcca
    61921 tatcttcatg ctctaacgca tgtaacattt tattagctaa ttccatttct gcaccttctt
    61981 taataataag tcgtttttct attataccat tacttcactc ataagaaaaa gtgattgcct
    62041 ctcttaaata aaaataccag cgctgatgtg attagcatac agcactggta gaagtgatta
    62101 ttttaaaagt gagcgaatat cttcaaagaa agtcgggtaa gaaacagaaa ctgcttctgg
    62161 gcgttctaat tccacatcgc cttcctcgac aagaagtgct gcaatttgta gcatcatgcc
    62221 aatacggtga tccccgtagc ttgttacatt ggccgcatga agtggtgttt tcccgcggat
    62281 aattaaaccg tcttcggttg gagtaatatc tgcgcccatt ttgtttagtt ctgtcgcaac
    62341 cgcatcaatc cggtttgttt cttttacttt tagttcagca gcgtctttaa taatcgtcgt
    62401 tccttctgct tgtgtcgcta aaagtgcgat aaccggaatt tcgtcaatta aacgaggaat
    62461 aatgtcgcca ccgatttccg ttccttttaa atcgctagtt ttaactacaa ccgtacccgc
    62521 taatttacca gtacttctgc tagaatcttt gacaactaaa cttccaccca tttgctcaac
    62581 tacatcaaaa atccctgttc tagtagggtt caagccaaca tgcgtaagtt caatttcact
    62641 gccgggtgtg attaagccag ctacgataaa gaacgcagca gaggaaacat cgcctggaac
    62701 cgtcatttct tgcccagtaa atgtttggcc acctttgacg cgaatggtta agccatccat
    62761 ttcaatttca ccgccaaatt ggcgaatcat gtgttccgta tgatcacgag tcttttcttt
    62821 ttcatggata atcgtttcac cttctgcttg taaagctgca aaaataatcg cgctctttac
    62881 ttgtgcacta gcaactggca tatgatattc catgcgtttt aatgattgct tcccatttat
    62941 cgtaattgga gcaaattcag agccatcttt gccatgcatt tttgccccca tttgttgcag
    63001 tggtagcatg acacggttca tcggacgttt cgcaattgat tcatccccta aaatgactgt
    63061 gtcaaaatct cggccagcta aaatgcccat cattaaacga atcgttgttc ccgagttacc
    63121 aatatcaagt ggaccatctg cctgttttag cccatcaaaa ccagttccgt gaacaataat
    63181 ttcttcttcg gtttcttcaa tttttacacc caatgcttta aatgccttaa ttgttccaag
    63241 gcaatcatct gcacgtaaga aatgacgaat gaccgttttt ccttctgcaa tggccccgaa
    63301 cataatgctg cgatgggaca ttgatttatc tccagggact gtgattgcgc caaccagccc
    63361 ttgtttattt gtaattaatt tcatcgtcat ttctctccta ttcgtaatgg catgtatagt
    63421 tacttcttgt ttcaatgcaa cgtttcgccc ggtccctgtc ttcatccgat tggaaagtaa
    63481 tttgtaacac accgaaaata tcttcccgtg tttccaaaat cttgatgttt gttaaactga
    63541 tttcttcttc gcccagatac ctagtcactt cagaaattac ccctggataa tctggtacat
    63601 cgacaaataa atcgtaaaaa gatggaatcg caccaccttg atgaactgga agtgaatctc
    63661 gaaattcttt tgccccatca aaaaaggcat atatagaact cgcgtcttca ctttcaagca
    63721 tctcaagcgc ttcgttcata ctgtctcgcc aaatcgtcag ctgtttcgtt aacgtttttt
    63781 ggttgctaat agaaatatcc gtccacattc ttggatcaga agaagcgacc cgtgtaatat
    63841 cacgaaatcc gcctgccgca agtcgaaatg ctgcaggatg ttcttctgta aagctttgcg
    63901 tctggttcac taaagccgcc gccacaatat gcggtaagtg gctcaacatg ccagtaattt
    63961 catcatgctc atttggtgat aacactaaga acttagcatt cgtaccagac agccacgtcc
    64021 taagttcagc cactttgtct tctgctacat ctttcgttgg tgttaacaaa taataggcat
    64081 tttcaaacaa cagttcttta gcagcacgga caccactttt atgcgaacca gccattggat
    64141 gaccgccaat aaacgtaata ccactttctc taagtgccgt ggatgcttcc atgatggttc
    64201 cttttgtact acctgtatct gtaacgatca cattttcctt taaacgcagc cctggtaaac
    64261 gcgttaataa ctgttctgtt tcttttaccg gacaacaaaa aacaagtaaa tctgcttttg
    64321 gcccatctat taaaatactt tcgccaattt cgtcaatcac accgagagac tttccaactt
    64381 ctaacgaatg ataggaaacg tcaattccga tgatatgtgc ttctgggtgt ttggctttaa
    64441 tcgcaagggc aatagaaccg ccaattaacc caagcccaac aataactacc gtccctttca
    64501 ttcaaaaacg cctccaaaca cttacaataa tttttctaaa agtgcaatta ccgcactatt
    64561 ttcctcttct tttccgatcg taattcgaac agcagttgga aaaccaagcg ccgcgccaga
    64621 acgcgtaata tagccatttt tttccaagta gctaaaaata gttcctgctt caattcctaa
    64681 atctattaaa acaaagttgc cattcgctgg atacagtttt acttgctcaa aacgtttcgc
    64741 aaacgcttcg tattgtttaa ttccatttgc attagaagtt cggcatgctt caataaaagc
    64801 ttgatccttt attgcttcta ttgctaattt ttgaccgatg ctcgttgtat taaacggcgg
    64861 acgaacgata tttagttgct caatgattgc tttatccgca ataccataac caacacgagc
    64921 gcttgccaaa ccataaattt tactaaaggt ccgggtaata attaaatttt tataagtgcg
    64981 aattagtttt tcatgttttt caggctgcgg cgtcacatat tcaatatatg cttcatctaa
    65041 aacaacaagt acatcacttg gtactttatc taaaaacgct tgaatatctg ctaaatcaat
    65101 gtaattccca gttgggttat tcggattgca aacccaaaca atcgtcgtat tgtcatcaat
    65161 cgcattcaac ataccatcta aatcatgcgc accatccaca agtagcggaa tttctcttac
    65221 ttcggcgcct tcgattaacg cattttgacg atactgcaca aatgtcggtg tcgccatcac
    65281 tgtatttttt gtcgtatcca gtaaaacccg cgtcaacagt tcaatcagtt catccacacc
    65341 agctgtaaaa atcagttcct cttcttccag ttggtagaaa tcagcgacca ctgtacgcaa
    65401 gctagaagcc cagccatctg gataaatttc tgtttccaca ctagaattgg cttgaagctc
    65461 cgccactttt ggagaagttc ccagtgggtt ttcgttagat gatagtttgg tgattttcgt
    65521 taaaccaagt tctgccatca cttcttcttc gcgttttcca ggtttataag aagatagacc
    65581 tgtaagtgat tttttccatt tcattacgca tcctcctctt ttactaaatc tgggcgcagt
    65641 acttttgctc ctcgtaagta gacatggttg atggcttcga gtggtttatg tagatctgtg
    65701 aataccatga aacgaatgca cattggaagc gaatttggca ccggaatttc ttgcatcccc
    65761 atgacaggaa catattcaaa gccaggtgtt tcacgcaccg ccttagctgg aaaagcggca
    65821 aaaatatctt ctgtcactgt aatgatgacg gatgttagtt gctcactatc tgttatttca
    65881 ttttgcgtta aaatttcttc aaataattct ttcgtcgctg cataaattgc ttccggtgaa
    65941 ttagtttcta ttgtcgttgc ccctcgaatt gctctcaaat gccattccct ccatttcgca
    66001 tcacacgttt gtaagtttca aaaatcaaat catcttccgc tttaaaaata accggttctc
    66061 caatttcttc gagtaaaacc atacttattt cattaaaagt tgttttttta tcatgacgca
    66121 tattttccag tattttatta aatggaacag ttgcatcaaa tgtcgtatca tagcctaact
    66181 gttttagcca cgttttaaat tctgctaaat cgaaatccag tccgtaaatt gtctcactca
    66241 tcgtgagtgc ataaatcatc ccataagtaa tcgcctcgcc gtgcagccac ttgccaaagt
    66301 ttccgtaggc ttcaagtgca tgaccaaatg tgtgaccaaa attcaaataa gcgcgcacgc
    66361 cttgctcggt ttcatcttgc gcaacgatat ttgctttaat ttcaatccca cgttgtaaaa
    66421 acggcgtcaa atccttcgta taaaagtctt tcggctccgt aaatgtatcc attaaggccc
    66481 gtagtaacgt ctgatcgcta ataagcgcat gtttaatcat ttccgcaaaa ccagagcgca
    66541 tttcccgttc tggcaaagta gcaaagaact gggtatcata aatgactgct tctggctggt
    66601 aaaagttccc aatcatgttt ttgccaagcg gatgattgat cgcaaccttg ccacccacgg
    66661 cactatcatg cgcaagaacc gtcgtaggca cctgataaaa aggaatgccc ctcatatacg
    66721 tagccgcaac aaaaccacct aaatcaccaa taacgcctcc accaaaagca attaaaaccg
    66781 ctttacgatc aagacctgtt tcaatcaatt ttgtcatcac atcttcatat acacgaaacg
    66841 ttttcgcttc ttccccgttt ggcgccacat aataagtgac tacaggtaaa tcagcgagaa
    66901 ccgcgtcaag ctttgcttta tgaagttccg ccacatgctc gtctgtcaaa acaaacacat
    66961 gggaaaattt agctaggctc tccgtccact tttcccggac atcttctaat gcgaattcat
    67021 taatatatac tgggtatgtt ttacttttag cacggactgt aatttctggc atgtttaaaa
    67081 ctccttcgtt aagtttcggt gttcctccac atgtttttta agtgtgtcaa aacgatcacc
    67141 atcaaatttt tctaacacag caactgcaac ttcccaagcg acaacagctt cagctaccac
    67201 acttgcagca ggtactgcac aactatccga acgttctaca cttgcattaa acgtttcttt
    67261 tgaatcaata tccacacttt gaagtggttt gtataatgtt ggaattggct tcattacgcc
    67321 acgaacaaca attggcatac cattggtcat tccgccttcg aatccaccaa ggttatttgt
    67381 acgtctcgtg tagccatctt ctttactcca taaaatttca tccatcactt cactaccagg
    67441 ttttctagca gcttcaaaac cgacaccgaa ttcagcgcct ttaaatgcat taatacttac
    67501 aatcgcacgc gcaatttttg catctagttt tttgtcccac tgtacgtagc taccaagtcc
    67561 agctgggaca ccaccaacta caacttctac gataccgcca atggtgtcgc catttttctt
    67621 cgcatcatca attttttgca tcatttcttc tgccgctacg ccgtctaaac aacgcactgg
    67681 agaagcttcg gatgtttctt gaatttcgct aaccgcgtaa tcacgtgtta agttcgcacg
    67741 agttccacca atttcaagta catgaccagc tacttcaatg ccaagttcat gcaataattt
    67801 tttcgctact gctccagctg ccacacggac agtcgtttcg cgcgcgctag aacgttctag
    67861 tacgttacgc atatcgttat gaccatattt cataccgcca actaagtccg catgtccagg
    67921 acgtggacgg gatacgcgac gggatttttc atttttttct ggaactggtt caatgctcat
    67981 aaccgtttcc caatgcttcc agtctttatt ttcaacaaac attgctacag gtgcgcctaa
    68041 tgttttacca tgacgaatcc ctgctgtgat ttgtacttgg tctttttcga tacgcatccg
    68101 tgccccacga ccatgcccac cttgtcttct ttttagttct ttatttacat cttctgctag
    68161 taaaggcatt cctgctggca acccttcaat aattgttgta agccccggtc cgtgtgattc
    68221 tcctgccgtt aagtatctca tctgctcatc tctccttttt ctatttcagc tagattttct
    68281 agcgtttata ttttagcgct ttaaagtata tgtgtaatat cttaacatat gccacgcgag
    68341 aaaacaatac tttcgtttca ttctttcatc ttaccaaaaa accgcatgaa atggtaattt
    68401 ctctataaaa aaagagccta ggtttcccta aactctatac tatgttaaat ccaagtgtcg
    68461 attgcctttt gataacttaa aatttcctgc ggtgcaaaaa acaactgaat ttcccgtttc
    68521 gcactttctg ggctatccga tccatgaatc acatttcgat ttgtatgtac cgcataatca
    68581 gcgcgaattg ttccggggtc agcttctaac ggatttgttt tgcccatcat acggcgagct
    68641 gttgcaatcg catcatctcc ttctaacacc atcgcaaaca ctggtccaga agtaataaat
    68701 ccaattaaat cctcgaaaaa agattttcca atatgttccg cgtaatgttt ttctgctagt
    68761 tcacggtcaa tttgcattaa ttttccagca actattttta agcctttttt ctctattctt
    68821 gtgacaattt caccaataag tcctcgttct acaccatccg gcttaaccat tacataagtt
    68881 tgttccataa agaatcctcc ctcacgttaa taatttcttt tatctaaaac acgaacgatt
    68941 tgttttaatg gttttaattc aggcacttgc ggcaaagaat ccagtatttc tacagctttc
    69001 tttaagtagg ctgttgctac atcttcggcc tgttttgcgc ccgctttttt gacttcttcc
    69061 actaaaacag caatttcttc tgctggagtt tcctccgtaa cctggctgat gcgttttttt
    69121 agaaaaggat cttccattgc aaagaatact ggcaatgtca catttccttg tcttaaatct
    69181 tccccagctg gcttaccgag ttctttttct gttccaacaa aatcaagtac atcatccgta
    69241 atttgaaacg ccatgccaac ataataacca aaacgatata acttctgata atcagcttca
    69301 ctttgaccag aaacaacacc accgagtccg caactagctg ctatcagtaa agctgttttc
    69361 cgtttaattc ggcgtaaata attacgcaca ctttggtcaa aattatattt atcttttaat
    69421 tgttcgattt cacccgtaga aagctccacc gtaacatgtg atagcatttt atgcgcagca
    69481 acgtctttaa tttctgtcat atattccagt gatttggcaa acaaaaaatc accggtatac
    69541 atcgcaatat ggttgcccca cttcgattta atcgtctcgc gtccgcgtct taaatccgca
    69601 ttatccacca catcatcatg cacaatcgac gccatatgaa ttaattcaat cgctacactc
    69661 gcatttttta ctgcatcaaa gtctgcatta ggagcaagtc ttgctgataa gcaaacgaac
    69721 attggtctaa ttcgttttcc accagcctct aataaatgaa gtgctgcatc agaagtagtt
    69781 tcagcagctg cgccagaaag ggccttttta agttcttttt caactgagtc aatgtctttt
    69841 tgcatatttg catataaaaa gttaagtttc atgcttgcca ccttattgtt ccttcttttt
    69901 aaatccaaag tgggttgcac tcgcgccgcc actgtgtgaa atatatctta cgtatgaaaa
    69961 tccggcttct tgaaacattt ccgcaagtct agccattcct ggaaactcac gcgttgattc
    70021 ttgtaaccag ctatattctt tataactttt cgcaaaaaac ttcccgaaaa caggcattac
    70081 atagcgaaaa taagcattaa acacttgttt ccagccagga atattgggtt gagacgtatc
    70141 aatacatgcc agctgtccac ctggttttag cacacggtac atttctcgca gcacttgcat
    70201 ataatccggt acatttctaa gcccaaagcc aatcgtcaca tagtcaaaac tattatctgg
    70261 aaaaggtaat tccattgcat tcccatgaat aagttctaca ttgtgcaaat ccgcttcttt
    70321 tactttttcg cgaccaacct tcagcatatt ttcactaaaa tcaagccccg tcacatgacc
    70381 ttcaggacca atttcttccg ccatcataat cgaccaatct gccgttccac agcaaacatc
    70441 aagaacattc gtcccttttt gaacacgcat tagcttcatt gtctctttac gccatttcac
    70501 atgtagttta aaactaataa cactattcat tcggtcataa cttggagaaa ttttctcaaa
    70561 tactttatgt actttttctt ctttagtttc cgtcatatcc cgaatctcct tctatttatc
    70621 agtcgttaat aacttcgatg attctttttc ctagtatatt agaaagcggt tctgatttat
    70681 ctttcaaccg tttcacttca cttttcacat catgaataat tgctactaac cagctttcaa
    70741 aattagatac agcttccttc gcaaaatagc catgatcaaa cgcccgcttc aatctagacg
    70801 ctccaatttc tttgtaagta gcaagttctg tttggagtct tttgagcaaa aagaactgac
    70861 aaccaagcgc gataaatgtg tcatctttca taaaatactt cgcaaacttg gcaaaaatag
    70921 ccgcatttgt taacgtaagc tgagataaat actcttcatc tgttgcgaca tgtaactggt
    70981 aaatattggt ttttgctgtg tttgtttctt gaaccccgct ttgcaatgct cgaagcagtg
    71041 gaatcatttc taattcagca agtgtgcggt aatagagagc actataaaaa tccccagcga
    71101 gaaccgtcaa ctcttgctcc ttacgtgtta gctgtacaac atcgcctggt tcatcaattt
    71161 tttcatgtgt atcatgcgct aaaatcatgt acagcgttgc actaacgacg cgatatgcag
    71221 aagcatcagt caaatcagag ccagaaatcg cttcatgaag aaatagcatt tgatctttgt
    71281 ccatttgccc gccttcatta ttctcttgta aatattgata gactgcttgc tcatgtacca
    71341 actgctccac ttcctttagc ccagcctctc ttgcctgata agtcatttaa caatcccctt
    71401 tgaatctcct tattatgtaa aaaattatac cataaaggat atttaattat gcttaattaa
    71461 agctaaaact tcacttctaa gcttatcgtc atttttaaaa gcaccacgaa cagcacttgt
    71521 aattgttttt gttccaggtt tatttacacc gcggatagtc atgcacatat gctctgcttc
    71581 catgatgacc attacaccca acggttttag tttttccatc ataatttctg caacagtcgt
    71641 tgtaatccgt tcttgtaact gcgggcggcg acttacatca tccactacgc gagcaagttt
    71701 actaagacca gcaactcttc cattttgtgg taagtatgct acatgagcta ctccaaaaaa
    71761 agggacaagg tgatgttcac acatagacga aaagcgaatg tctttcacaa gtactaattc
    71821 ttcatgttgt tcttcaaaaa tagtatcgaa atgaacagaa ggatcttttt tcagcccagc
    71881 gaaaacttct tcatacatac gagctactcg cattggtgta tcaatcagtc cttcacgttc
    71941 tggattttct cctactgctt ctaaaataac ttttaccgcg tcagcaatct tttgcttgtc
    72001 tatttgctcc atccttaatt cccctatctt tttagcatta tataccttgt atatcttaac
    72061 acagccaaac ttcaaggtaa atttaatttg cttgaataag tgataataat aggggttttt
    72121 ttgctttcgt aagtatattc cctatttcta aaacagaaaa ccactaaaaa tgggcataaa
    72181 aaaactagcc tagcttaatt ataaaattaa ggccagacta gagttagtgc ttaaaagtct
    72241 atgtagctta tttaacagct tctttaagcg ctttaccagg tttgaaagct ggtactttac
    72301 ttgcagggat gtcgatttct tctttagtac gagggttacg acctttacgg gcagcacgtt
    72361 cacgtacttc aaagttacca aatccgatta attgaacttt ttcaccttta gataaagaag
    72421 tttgaatagt ttcgaataca gcttctactg ctttcgctgc gtctttttta gaaagatcag
    72481 ctagttcagc aacgctattt actaaatcag ttttatttgc cattgtgttt tcacctcctt
    72541 cacagaatac tacaaaataa gcaggtacaa gatatacctg tatttctctt tttttccaaa
    72601 aacaaaaatc aatttggaaa tctaaggaga atcatgactg aaatggctta actacaagcc
    72661 ttaacagtaa ttctgataaa agattatcac ataatcccta caactgcaag gaataatgcc
    72721 aaactgacac cgtttcttaa cattttcaat cacaaatatt ttctttaaat gcttgaaaac
    72781 gtgatagtat caacctgtta tccataatac taacttggaa gccttagaat agcaagcgat
    72841 accaccacaa ttagctaaaa tagttctttt ttcataaaaa tatgggtaaa tttgcgtcta
    72901 ttacctgaaa actctaggtt tctgagccta gttttattct aacatttctt tttggaaagc
    72961 tgctttttct gccgcagtaa ttccaattcc tttttctaaa taattagcta ctgagccata
    73021 ttgttttttc atttcatcaa aggcaatttc caaatattca ggacgagctt ctgccattgg
    73081 cctgaacgtt tctaaatcaa ttttttcggt tccattcgaa aagagcgcca cgattcctcc
    73141 catttcttgt aaaatgtcgt cctggtagcg attagtgatg gcgtaatcgt cgaaaatcgt
    73201 tttttctggt acatctaaca atgttagtaa taatgcccct aggacgcctg tacggtcttt
    73261 tcctgcagtg caatggaaaa cgaacggcaa tccagctttt gcatcttcta atacttctgt
    73321 aaaaatttct ctaaagcctt ccactgattg cacaaacacg cggtagcttt cacccatcag
    73381 cggttcataa atagttgtat catttgttac cggtagcttt gtttcttcat ttttggcagt
    73441 accaatagga atatgtttat ttagcacacc ttcaattgca ggcgtaggtt gtgcttgtac
    73501 ttccgaacta ctgcgcaaat cacaaatcca tttaatatgt agtttttgaa gcaaagctgc
    73561 atcgttctca ttaatattca ctaaattaga agagcgatat aacttacccc attttacatg
    73621 cttgccgttt ttggatgcat aaccgcccat atctcgaaaa ttgaatacac tttcaagtgg
    73681 caaaattcgt tctgaaacag tggttctatc tccgtttggt gtctctaaaa agaaataaat
    73741 aggaatatcc tttgtgtcat atgaatagtg atcaacatca tttgttactt tgaaaacagg
    73801 atcactatta tcctctagtt taggactgct acttacaaaa acgactgtgc cttcgctgac
    73861 ttcttctttg ttccaagtta gtgttacggc tttatctgta cgagtaactt ccatattatc
    73921 cacctacttt ttattatttg gctcttctgc tacattttag catatttcat aaaaaaagag
    73981 ccaaaataag cggatagccc attctgactc tttctattaa aatgattctt tttcgatctt
    74041 tttttcgcga cccattaata aatcaactgc ttcgcgagca tctttatttt cgaataaaat
    74101 cgcgtaaatc gattcggtaa ttggcatatc aatatctagt tttttcgccc aaccatgtac
    74161 tgctttagct gttcgaacac cttcaacgac catgcccatt ttttctaata cttcatctaa
    74221 attctcgcct ttacctagca tattaccagc acgccaatta cgtgaatgca cactagtaca
    74281 agtaacgatt aagtcaccaa tacctgtcaa tccgtaaaat gtttgcggat tagagccaac
    74341 agcaacaccg agacgagtga tttctgccat cccgcgagtc attagtgccg ctttagcatt
    74401 atcgccataa ccaaggccgt cagaaattcc tgcacctagt gcgataatat ttttcagcgc
    74461 gccaccaatt tctgcaccaa tcacatcatc attcgtataa atacgcaaat tattattgat
    74521 gaaacgatct tgaacaattt ctgcagctga taaatcttta cagctcgcac aaagtgttgt
    74581 cggatgacga agcgcaactt cttccgcatg acttggtcca gaaagaacaa caagcgcttt
    74641 acgtttggac gcatctattt cgtcttcaat cacttcggac attcgaagat ttgtttctgg
    74701 ttcaatacct ttactcacat gcactaaaat ggttggttct tttagcgctt catttaactg
    74761 cttacaaacg attcgcatcg catttgttgg aatagcaatt acgacaattt ctgcaccatc
    74821 aatagcttca tcaagtgaca atgtcgcttt tacctcagtt ggtaaaataa tatctggcaa
    74881 atagtgacta ttcgtgtgcg attcgttaat ttcattcaca attttatcta agtttcccca
    74941 aataactggt tgatgattat tatcagctag gacaagtgca agacctgttc cccaacttcc
    75001 agcgccaaga atagctactt ttttctgtgt cattatattt ttcctcccga aaactttact
    75061 tacgcttacg agcaatcact cgaattggcg taccctcaaa cggaaatgcc tctctaatcc
    75121 ggttttctaa gaaacgttca tacgagaaat gcattagttc tggatcatta acaaatacaa
    75181 caaacgtcgg tggttttaca gccacttgtg ttgtatagaa aatcttcagt cgtttacctt
    75241 tatccatagg tgatgggttc attgcaacgg catcactaat aacatcattc agcatacttg
    75301 attgtacacg taatgaatgg ttatcgctta cttgattaat aagtgggaat aggttattta
    75361 agcgttgttt tgttttcgca gatacaaaga caattggtgc atagcttaag aattggaatt
    75421 gctcccgaat atcttccgtc catacgttaa ttgttttttc atctttgtta attgcatccc
    75481 atttgtttac tacaataata atcgcacgtc cggcatcatg cgcatatcca gcaattcgtt
    75541 tatcttgctc acgaatacct tcttctgcgt tgataaccac aagaacaacg tctgagcgtt
    75601 caattgctct cattgcacgt aaaacactat atttctctgt gctttcatac actttcccac
    75661 gttttctcat tccggctgta tcaatcatga cataatcttg gccatcgaaa gtataagttg
    75721 tatcaattgc atcacgagtt gtacccgcaa tatcagaaac aataacacga tcttctccaa
    75781 gaagtgcatt taaaatagaa gatttaccaa catttggtcg accaatcaaa ctaaatttca
    75841 ctgtatcgtc tggatattct tcctcttctt cttttggaaa atgagcccga acagcatcaa
    75901 gcatgtcgcc aagccctagc ccatgtgaac cagaaattgg atacggttca ccaaacccaa
    75961 gagaataaaa gtcataaatt tgatctcgca tttctgggtt atctacttta ttaatcgcta
    76021 aaacaattgg tttattagac cggtaaagaa tttttgctac ttgttcgtct gcatcggtaa
    76081 ccccttcacg accattggta ataaaaataa ttacgtctgc ttcatcaatt gcgatttccg
    76141 cttgtgcgcg aatttgctct aagaatggtt catcggaaag atcaatacca cctgtatcaa
    76201 taatgttaaa ttcttttcca agccattccg ctgaattata tatgcggtca cgtgtcacac
    76261 cgggaacatc ttccactatg gaaacacgtt caccaacgat tctgttaaaa atagtcgatt
    76321 tgccaacgtt tggacgtccg acaatcgcta caactggttt tgccattatt tcaccttctt
    76381 ttttctcgaa tcctatttat caaactttct ttagtttatc agtaaaacag cttactggca
    76441 atgaaaagtt cgatttgaaa aagaaaaaga gcccatggga acagtctccc taggctcttt
    76501 tgcgtacaat tatttatcgt cgttttgaag accttttaat ttatcaccaa ttaaatcgct
    76561 catttggaat ccagtgtttt cttctggaag ttcataatca gcttcttcaa ctggagcatc
    76621 ttttaattct ttaatgctta atgataaacg tttgtctgct tcatttactt caagtacttt
    76681 cacttctact gtttgccctt ctgaaaggac ttcttgtggt gtcccaatat gttcatgaga
    76741 aatttgagaa atatgaacca aaccttctac tcctgggaat atttccacaa atgcaccaaa
    76801 agtaactagg cgtactactt ttccttctaa aacagaacca actggcgctt tttcggcaat
    76861 gccgtcccaa ggtccaggta aagtcgcttt aatagaaaga gaaatacgtt cattttcagg
    76921 atcaatccca ataactttaa ccgttacttt ttgaccttct tctaacgctt cttgtggtgt
    76981 tgcaatatgt ttataagaaa tttgtgagat gtgaactaat ccgtccacgc caccaatatc
    77041 aacgaatgca ccaaaattag ctaaacgttg aacagtacct tcaatcacgt cgccttcttt
    77101 gatttcgctc agtagcgctt gcttttgact agctttttct gtttccacaa ctgcacgatg
    77161 gcttaaaatc actcggttat tttctggttc aaattctact actttgaaag taagagtagt
    77221 tcctttgtaa tctgcgaaat cttccacaaa atggtcttcc actaaagaag ctggaacgaa
    77281 cgcacgaaca cctaggtcga caactaatcc acctttaaca acatcactga ctactgcttc
    77341 aaaaacttca ccagattcga atttagcttt aatatcatca gatgcttttt ctgcatccac
    77401 ttttcgttta gataaaacaa gtatatcgtc ttctacttta gtgacaatca aatcaagtgt
    77461 gtcgccaacg ctcacaacgt cagaagctgt ctccacatgt atattggaaa gttcacttat
    77521 tggaacgaca ccatcaagtt tgctacctgg aataccaaca taaacttgtt tatcttccac
    77581 gcttgtaact gtgccagtga ctttgtctcc ttcttcaaaa tttctaactt ccacatcaaa
    77641 taaatcttca gacatgtgta gccctccatt cgttagtcga attttaggaa tttctaattc
    77701 agaagcaacc ttcacgcttg cttcatctgc ttgactagtt ttcctagata ggcaaattcc
    77761 gattaaataa agaaaaatat caaatacacc ttctgtaaaa ctgatcttcc agctagaaaa
    77821 tcctttcaag atacttttca caaagtaaaa aatctctctt ataacatcct acaaatccag
    77881 acatttgtca agctctttta aggggttgga aaagcctaca gggcgtgaaa tcgcttcgtt
    77941 tgtttagcct ttcacggtta aattaaaaaa gtgctacatt tccatttagt taagaaaatg
    78001 tagcactttt ttgctaatta ttgattttta gttctgctag tgaaagaatt ttattggcta
    78061 cttcatcaat cgacattgat gttgtatcta cttcaatggc atcatctgct ttttttaagg
    78121 gggagtgtgt tcttgtataa tctaaatgat ctcgttcttc aatttctttt ttgagttggc
    78181 ctaaatctcc agcaaaacct ttcgccatat tctctttata gcgacgttcc gctcgttctt
    78241 ctacgcttgc tagtaagaat atttttagtt cggcgttagg aagaactgca gtaccgatat
    78301 cacgaccatc cattacaatt ccgccttctg tagcaaaaac ttgttgacgt tcttggagtg
    78361 cttcacgaat agacgggtgt gcggcaacga tagatacatg attggtcact tctaaagaac
    78421 gaatcacttc tgtgacattt tcttcaccta caaatacttg ttgtacttcg ccaggttcaa
    78481 aacgaataac tgttttttgg agtaaagtag ctatagcttt ttcgtcttca tatgcgatgt
    78541 tattttttaa agcgatatag gttactgcac gatacatggc acccgtatca atatagacaa
    78601 agcgcaattt ttttgcaacg attttcgcca ccgtgctttt cccagccgca gccggtccat
    78661 caatcgcgat acatatcttt ttagtcataa aataaaactc cttttatctg aaattggttt
    78721 gattaatttc ttcttgtgat gctaaaagta ccattaattt catccgtgct tttttgctat
    78781 cgtaatcttt tcctaaaata acgccacgat tatacaagtc aaacgtgcta ccttcataat
    78841 catatgtagt atatacattt ccttcttccg cacttgttgt tatgacaact ggaattcccg
    78901 catctaatgc tctgataata gctggcatca tttttggcgc cacttgccct cgtccaacac
    78961 cttctaaaac gattcctgat acgccactat ctatcgctgc atcaataaac aaaccatctg
    79021 caccaatata acatttaatc acaaccactt ctggtaaatc aaggcgaata tcaaaacact
    79081 catgctccag tggtttttga tacagaaaaa cttggtcatt atcaataata cccagatagc
    79141 caaacccaaa agcactaaaa ccttgtatgt tggatgcatg aacttttttt acatatctcg
    79201 ctgcaaaaat tcgttcattg aaaacaacga ctgtcccagc ttgacgtaaa tttatttcac
    79261 acgctgtata aattgcatga cgaatattaa cataggcatc tgtccctggc tcctcaggtg
    79321 ctcgctgaga tccagttact acgattggtc gcgcatcggt tactgcaaga tcaagaaaat
    79381 aggctgtttc ttctaatgaa tctgttccgt gcgtcactac tattccatca tatgtttcat
    79441 ccatgaagat agattcgata agttgcttca gactgattaa atcaggtagc gtaatgtgca
    79501 tagatggtaa ttggaaagta gaatagatat caatttgaat ttctgttggt aattggcata
    79561 atgcagctaa ttcttctcca gataattctc ctgatgcaag ttttcctgat gctgttttct
    79621 tacttgcaat tgtaccgcct gttgtaatta gtgctacttt tgccacggtt attcccccct
    79681 acattttcct tttaaacaaa caaatgagtc tcggaagcgt ttcccagacc cattcagtgt
    79741 tgtttattac tgtggaattg ttagaactgt accaactgga acattgtcac ttcctagtcc
    79801 attggcttgt ttaatttttt ctactccagc agctgccccc gcttgtccat atgttgaacg
    79861 tgcaatacta taaagggtgt ccccagcttt aacagtatga gatcctccag ctttttgctg
    79921 tgaggcttca ttcgcttttt gctgctcagc tttttcagca gcagctttct cggcagcagc
    79981 tttgtcagcc gcagcttttt cttcggcagc ttcttgttct ttttttgcat ttgcagcttt
    80041 cactgcatct tcttcttgtt ttttcttatc tgccgcagct ttttcttcgg cagctttttt
    80101 ctcttcagct gccttttcag ccgctgcttt ttcttcggca gcttttttcg ctttttcttt
    80161 ttcttcttta gattgcgtgt tgtcagatac atttacggtt gattctgttt ctgttttcac
    80221 ttcatttgat gaacccatat tttgtactgt tacaaataca atcacgataa cgattggtat
    80281 taatagaaaa aaaacaatca ataaattaag taatgggtat ctaaaaatgg ttttcttttt
    80341 tcctcttctg ctatcagaac gggataacat tggcggttca ttgttgaatt catcttgacc
    80401 ttcagaactc atatcataat cagccggttc ttcgtattcc cgtttttctt ttcttgtttt
    80461 taccactcaa agttcctcct ttagtgcttt ctaaacttat cctatgcact attattggca
    80521 cagagaagtg ttacatatga tgttaataaa tgaaatacct ttgaaataat tatacccata
    80581 aacgcaacat acaacaacac ttaaaccact tttttagaaa aaaaagcaag aattattata
    80641 atttagtact tctggcatag aatttatgtt gattttatat agattactga acaaaataat
    80701 aacaattttt ttacttttaa acaagtcttt ttttcacaaa aaatatgaaa ctatatagtt
    80761 tttgtcaaat ttcgtaacag caaaactatt gcaataaata agctaaataa gcttcccatg
    80821 ttggaatttc tttttgctgt gttattggtc ttttttcaaa atcgattatt tctgctccat
    80881 ccaaatcaca acagttttct ggggtgactt ctaacggcgt ttcttcaaag tatcgtagaa
    80941 tataattacg gcgacaatcc gttgtatgca gatacccaat aaattgttgt aaattagccc
    81001 gcttccattt ttttcgataa tccattttgt cggttaattc tttcgtactt aaaccacttc
    81061 tttggtagta ttcaataaaa cgttgctctg tttcaggtaa cgttttgcgt tgttcattcg
    81121 tcagattcat taagttggca tctgggatat cttgatcggc taattgcatt tgaatgaatt
    81181 catctccatt cgcgtataag agaatcgcca cactgttttc gccatcacga cctgctcgac
    81241 caatttcttg caaatatgct tccaaatctg caggcatatg ataatgaata acatagcgaa
    81301 tgtcagcttt atctatcccc attccaaatg cgctagtggc gcaaataaca tccagctgcc
    81361 cgtaaacaaa ttgttgctga ataataattc tatcttctgt atccatatcc ccgtgataat
    81421 aagctactct taaatcagca atttcgctta attcaagcgc agtgctttcc gctaattttt
    81481 tactagaaaa ataaataatt ccgggtgttt gtagtttgcg aacaagcgca tataaacggt
    81541 ctttttttac atgctggtta gaaaatttct ccacttgtaa agaaatattc ggtcgattaa
    81601 cagaataaac aatttgcgca caatccgtta gatgtaattg cgttaaaata tctgctctaa
    81661 ctttcttggt tgccgtagct gtcagcacca tagtcacagg aaattcggct tcttgaatga
    81721 acttacctaa catcaaataa tcagggcgaa aatcatgtcc ccactgcgaa atgcaatgcg
    81781 cttcatctat gacaaataag ctgattcttt gttttaatag taagtttttc accgtttcat
    81841 tatttagcat ttctggtgat aaaaaaataa atttatataa atggatgttt gcaaggactt
    81901 gccctttttc ttctcgtttt aaaaagctat taagcgctgc tactcgcttt tctccgtgag
    81961 cacgcattcg ctccatttga tcttgcataa gggagagaag tggagaaaca atcaatacta
    82021 atccatccat caaatgaccc gctaattgat aacaaatggt ttttccagtt ccagtaggta
    82081 acatagcaaa acaatttcgc tttgctaaag ctgtttcaat tacttctttt tggccagggc
    82141 ggaactcatc aaaaccaaga tattctttta attccttttc taagttcact gcttaccctc
    82201 cctactaaca actgctaacc gaatttgata ataatccaaa tcaggaaact ccgcttttat
    82261 ttcacgcagt aaattccatt tctttgtaat aatcgtttgg atgattgtct cttctggtaa
    82321 ataaggaaca ttcgcttctt tcaaagtagc tcggatttct acaaagtgat catggatggt
    82381 actctttttc aaattccgaa ttcgctcgat tgcttctaaa tcagctccat tttgccataa
    82441 tacataggtt tgcatggcag aactagttaa cccattgagc tcatccggta caagactagc
    82501 tagaatcggc cattcttcgg gggttttttt catcgctata agcaaacggt gaacctcatg
    82561 gagcacctca aaataaacgt cccacttctc cacttgatat tttgaggcaa tttgttctgt
    82621 agtatagccc attaattcgc ccccagaaaa acgttccact aaaaacgctg gtcgagcaac
    82681 tgctaattta ttcatccatg caacgagttc accgtataac tgattcgcta aattagattt
    82741 atctcggtgc ttcacccaat gcttaataaa ttgttggact ttcttatcac gaataactgg
    82801 taaataatag ctttcatgat gatgaatgtt actaacaact tgaactgcga gtcgcaaatg
    82861 ggcaaaaaaa gcaaaagctt gcccttgaaa tgtaaaacct tggaagtttg ggtaatcatt
    82921 ttcaaacata gctactagtt gcccttgtgt cacataacca ttttcagtag aaagaatgct
    82981 accttggtgc actaattccg aaattcgttt ttctaaatag cttgctttta aatttggcac
    83041 tagtccaaat aaatgttgca tttgaaaaag atggatatct tgaacagctt gtccagttct
    83101 tcttccagct aaaacagtat gtaaaaatgg taattttcta ggtgtgatac ttttttctaa
    83161 aattgtcata atatagttat ctagcttatc caagacatgt ccaccacctt tttttgtacc
    83221 ataatcataa cacagaaaca cttgttctac attaattttt ccgaaaaaac tttttcaaaa
    83281 tatggtacaa tagaaaaaga aaaaatctgg ctgcaaatag ttattttaga aaggaagcgt
    83341 agaaaattga agtattgtct tgtcgaaaaa gacacttgta ttgcttgtgg cgcttgttcc
    83401 attcatgcac ctgatgtttt tgattatgat acagaag
//
LOCUS       DASDYO010000002        76780 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.002, whole genome shotgun sequence.
ACCESSION   DASDYO010000002 DASDYO010000000
VERSION     DASDYO010000002.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 76780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 76780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..76780
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.002"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            247..1653
                     /locus_tag="U0290_000083"
     CDS             247..1653
                     /locus_tag="U0290_000083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome ubiquinol oxidase subunit I"
                     /protein_id="HEM2300153.1"
                     /translation="MDKLFLARFQFASTTIFHFLFVPLSIGLVFMVALMETLYVVKGK
                     EIYKKMSKFWGHIFLINFAVGVVTGIIQEFQFGMNWSDYSRFVGDVFGAPLAIEALLA
                     FFMESTFIGLWIFGWDKLGKKLHLACIWLVSIGTIMSSFWILAANSFMQHPVGFEFKN
                     GRAEMNDFLQLITNGQLLVEFPHVIFGAFATGAFFIAGVSAYKMLKKQDVAFFKRSFQ
                     IAMVMAVIGGFGVAFSGHSQAQYLVKTQPMKMAATEGIWEDTADPAPWTMIAKINPEE
                     KKNEWEVNVPYALSFLSYGTLTGSVEGMNTLQKQYEEKYGEGDYIPPVKTAFWSFRIM
                     VGAGMLMILFALIGIVLAWKKKLVNAKWYLRFMIPMIGFPFLANSMGWIMTEIGRQPW
                     VVFGYMKTADAVSPNVSSGQILFSIIAFSTIYTILAILLVYLFIREIKKGPDGHKPEK
                     AEISVDPFDKGDESFVTK"
     gene            1640..2653
                     /gene="cydB"
                     /locus_tag="U0290_000084"
     CDS             1640..2653
                     /gene="cydB"
                     /locus_tag="U0290_000084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome d ubiquinol oxidase subunit II"
                     /protein_id="HEM2300154.1"
                     /translation="MSLNELWFLLIAILFIGFFFLEGFDFGVGMSTRFMARNALERRV
                     LVNTIGPFWDANEVWLLTAGGAIFAAFPNWYATMFSGYYIPLVFLLLALIGRGVSFEF
                     RGQKDSPLWIKTWDWVIFFGSILPPFLFGVLFASLIQGMPINSDMDMYAGFFDYITVF
                     SVWGGVTITLMCLLHGLLFITLRTEEDIQDRARRMAKRVWFITVPALVIFVVLAYFNT
                     DMFQVRPVLVPLMIGIVVVMYVLSALFIWKDRDILAFTFGGLGIVFTIATIFVSLFPR
                     VMISSINSAFDLTIENAASGQYSLSVMTIVAVTLLPFVLGYQIWSYYVFRKRVSSKEK
                     MTY"
     gene            2653..4377
                     /gene="cydD"
                     /locus_tag="U0290_000085"
     CDS             2653..4377
                     /gene="cydD"
                     /locus_tag="U0290_000085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol reductant ABC exporter subunit CydD"
                     /protein_id="HEM2300155.1"
                     /translation="MGKDLRNYKGIKKIMAILAVFTLVQGAAIIVMAITLARAITDLF
                     HEHAFQSVTIQIGLFAGAYFLRHFLNVWKKQIVYRYAAKLAKTMREELLDSLFALGPR
                     FARAEGTGKVVTMVMEGVADFRNYLELFLPKMMNMAIIPAMIWVYIAFQDWTSAFILM
                     ITLPILIVFMIILGLAAKKQADSQFETYRVLSNHFVDSLKGLETLRYLGLSHDHEGKI
                     ASVSSRYRKATMKTLRVAFMSSFALDFFTMLSIALVALFLGLGLIDGNMNLPIALSVL
                     ILAPEYFLPVREVGSDYHATLDGQEAGRVIQGIIDQAKAEKPETNALPLTTFAENTEF
                     SFENITVKHDVDAADSLHEASFTVKGFEKVGIIGATGAGKSTLIDVLSGFLTPTSGGF
                     RWNGESGASLASSDWQTQVTYIPQHPYLFHDTIAGNIRFYHPNSTDEEMKKAAESAGL
                     NKLVAGLEDGYETLVGEAGRMLSGGQEQRVALARAFLTDRPIVLMDEPTAHLDIETEY
                     ELKKPMLDLFENRLVFFATHRLHWMLEMDRIIVLDHGAVVETGTHEELLSRKGFYYNL
                     VKAQLEEV"
     gene            4377..6116
                     /gene="cydC"
                     /locus_tag="U0290_000086"
     CDS             4377..6116
                     /gene="cydC"
                     /locus_tag="U0290_000086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol reductant ABC exporter subunit CydC"
                     /protein_id="HEM2300156.1"
                     /translation="MRKSSWIIPYIKENRGLFLLVIFLGTLTFASAGALMFTSGHLIS
                     KSSLMPESIMAVYISTVGVRAFGIMRSVSRYVERLSSHSLVLRILEKMRVRLYRLLEP
                     QALLLKSRYKTGDILGLLAGDIEHLQNFYLTTMLPAIVSLVLYAGVVIALGAFSIPFA
                     ALFVLLIGLLVLVLPWVSLLYARGKNAYLKQGRNSLYQKFTDAVFGISDWKFSGREKT
                     FISNYEKDEADMLRTENKQFHFVNWRDFFSQLVVGFMVIVMVYWSTAESRDGAFSGTM
                     IAAFVLAIMALAEAFVPVSSAISDKSLYQDSLARLDKIEDPTLPTFEEETKEIERINT
                     ENVVLKAENLTFAYDEKSPEILNGFDFTLQQGEKVAIIGRSGTGKSTFLKLVQGALLP
                     TAGKVTMNGVEVENLRPQIPEITSMLNQKAHLFSTTVLNNIRLGNQDASDEEVYEAAK
                     KVQLHDFIMSMPDGYHTQMSEMGERFSGGERGRIALARILLQNTPIVILDEPTVGLDP
                     ITERDLLATIFETLADKSLIWVTHHLVGAEKMDRVLFLEEGKTLMEGPHAELMAEEPR
                     YKRLYQLDRPIEL"
     gene            6259..7206
                     /locus_tag="U0290_000087"
     CDS             6259..7206
                     /locus_tag="U0290_000087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2300157.1"
                     /translation="MKKFHGLVLTALVTCLIIPFSLAASAETNENGNNSTPTEEKTTD
                     TTENIITEEKPEPAVPTKDTTVTTSQKSKVQTTIDITDSQEVYSYEQNSKIDLKDFTA
                     TLTDYTDTKLTNYRLAANSKLSTAQTGIQEVTLLGDSEDGKTTAVKLNYLVKEKTAQL
                     TITDMNFDLETKIFTGKTKPFASVYMSSPADENFGEGTTTADKDGYFYAEWATTPKQI
                     TAYAFDESGNYSEEVTYQVPAKKQNEAVVTAPDKVKKIETKNAVKSATAKPADVAKVT
                     KDDKTDLPSTGDKGTEWIFVVAGVIVILVAVLLLRKRKK"
     gene            7249..8187
                     /locus_tag="U0290_000088"
     CDS             7249..8187
                     /locus_tag="U0290_000088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2300158.1"
                     /translation="MKKLLSGLIIVLMVSLLGHSFNAEAASYEKIIYDKAVNLKGVVN
                     QSKRNDGINSKMYKTSSSVKYLGSAKKYDKKTLIITREGKTARAKWYYCKLGNTTIGW
                     IDSRAFTNVGKPTIADTVPALWNSKKAIITTKPKNTTATTYFFQKNSAGNWYEVRHFT
                     SHIGKWGFDPKFSEKSSGTPVGVYRTGIAFGQKGNPGTKLTFRAITNRSYWISNSNDK
                     SYNTWQERNSSSSADEKMKIPQYKYGMEVKYNAKRVKGKGSAVFYHVDSPKYNYTLGC
                     VAQSEANTKEVLKFADKNTLIVLGEESRIKTFYGIN"
     gene            8300..9814
                     /locus_tag="U0290_000089"
     CDS             8300..9814
                     /locus_tag="U0290_000089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gluconokinase"
                     /protein_id="HEM2300159.1"
                     /translation="MTSKPYIMGVDIGTSSTKAVLFNQRGEVIFRQATHYELITDETG
                     KAEESPTEIFEAVLSSIQAVMKNVNKEELAGISFSSAMHSLIMVGSNGELLTECITWA
                     DGRSSETLEKVKRDNYLFQLYEATGTPIHPMSPFAKICWLKEEKPTLFKRTEKFVDIK
                     SYILYRLFGVWVMDESLASGTGLYNIMEHDWEFEAMEIVKLTPDLLPKVVPETYQLTG
                     VKKEYAELMGIPENLPFIVGGSDGALANIGIQATGQNDVTITVGTSGAVRKLTNQFQI
                     DSRGRTFCYGAGDGYFIAGGAVNNGGKVVEWGLQQFGSEAEISRRDFASFIAKIEEVP
                     PGAAGLLFQPYLLGERAPFWTNDIRGGFVGLTINHTKAHFIRAILEGVAFNLAEVYEA
                     VSAPDDIIYVTGGISAHDGWCRLLADILNREIRVPHTIEGSSLGAAIIGMRSLGILKD
                     LNLKHTLPIKAVYHPSENVLKYAELRLIFKQVTTQLMSSYSQLNSWQKKFDINS"
     gene            10090..10356
                     /gene="ffs"
                     /locus_tag="U0290_000090"
     ncRNA           10090..10356
                     /ncRNA_class="SRP_RNA"
                     /gene="ffs"
                     /locus_tag="U0290_000090"
                     /product="signal recognition particle sRNA large type"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF01854"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF01854"
     gene            10510..11151
                     /locus_tag="U0290_000091"
     CDS             10510..11151
                     /locus_tag="U0290_000091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300160.1"
                     /translation="MQQLKSKKKWLPALIVAVFVGIIVILAIMFGFFQRQEVFDKYEV
                     AYEIDGKLYEVFPISATDIGVDKKSKDKNLYFRVNSYYNIDYLFRLAYKQYEINEPST
                     NKYYAGLIDYSVADNAYVTQKDVYITNNESYATYDFFDKNGKKIYTYNPEETSNDDYI
                     VRIKPTILQGYEKSDIGSYDDYLNITALFKDKLGMDVNVRIDEDKEMVIFSIK"
     gene            complement(11183..11338)
                     /locus_tag="U0290_000092"
     CDS             complement(11183..11338)
                     /locus_tag="U0290_000092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300161.1"
                     /translation="MAVKRDMPEESKNSKVVKKEHFSIVFPDDIKEPKNASEQKKQDV
                     EKKTDDN"
     gene            11779..13143
                     /locus_tag="U0290_000093"
     CDS             11779..13143
                     /locus_tag="U0290_000093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2300162.1"
                     /translation="MNGLTAFLEKYFVPVAAKIGSQKHLVALRDAFISTMPITMAGSI
                     AVLLNAFFRDFPTDWGWTGFVEAMQPLIGINGYVYNGTLAIVSIIFAFSLGYNLSKAY
                     EVDRLAGGLVSLAAFVMNLTVTVSLDAVKAAIAASNANFDVATLPKEFAGIYGFFSLS
                     QVNGTGLFTAMIFGFISTIIYAKLMRRNIIIKMPDSVPPAVSKAFAAIIPALVALYVV
                     GIIDWAFFKITNMDVITWISKTIQEPLLSLSQGYGAVLLVTFLVQLLWFFGIHGPNVL
                     APVLESLWGTAQLQNISAAQEGAKLPFEWVRGSFDAYVWMGGSGGTLVLIIALLMFSK
                     RADARTVAKLSLAPGIFNINEPIMFGLPIVLNTIYLIPFLIAPMVMVTIAYFATTLGI
                     VGPVKIAVVWVMPPLLNSFLATGGDWMAPVISLINMVVAFLIWVPFVITANRVGVPEE
                     EMKA"
     gene            13278..13499
                     /locus_tag="U0290_000094"
     CDS             13278..13499
                     /locus_tag="U0290_000094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300163.1"
                     /translation="MIILNCPMKRDYITELLETYDKDGVTFKKIDEKGMKLTFETNIE
                     DEEKAAKIAKETIKATEIGSVLYFQVSVG"
     gene            13502..13684
                     /locus_tag="U0290_000095"
     CDS             13502..13684
                     /locus_tag="U0290_000095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3188 domain-containing protein"
                     /protein_id="HEM2300164.1"
                     /translation="MKIVNALFLISIGLIIIMFSPSYGKDGMASVPLLVTGLAVVLIG
                     CVFIVLKIRKDKKEKN"
     gene            13702..14166
                     /locus_tag="U0290_000096"
     CDS             13702..14166
                     /locus_tag="U0290_000096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3284 domain-containing protein"
                     /protein_id="HEM2300165.1"
                     /translation="MNVTQKLYISQKECFDTLVSSAIYDVKNATGKTLQVRKLEGYKY
                     QRTMSNGALATTKIVKVQPNELYQFETSSRVNTHTTTYTIKSTSETTCEVTYNELIET
                     EKALNKMNNIIVGFMFGFFRKKRVKNLLKSIELSVINESKQKQEKLAAKSEQ"
     gene            14415..16154
                     /gene="dnaX"
                     /locus_tag="U0290_000097"
     CDS             14415..16154
                     /gene="dnaX"
                     /locus_tag="U0290_000097"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit gamma/tau"
                     /protein_id="HEM2300166.1"
                     /translation="MAYQALYRIFRPQSFQDVVGQEHVTKTLKNAIVQNKTSHAYLFS
                     GPRGTGKTSAAKIFAKAINCEHGHDGEPCNECEICKGTTDGSIPDVLEIDAASNNGVE
                     EIRDIREKVKYAPTVAKYKVYIIDEVHMLSTGAFNALLKTLEEPPKHVIFILATTEPH
                     KLPLTIISRVQRFDFKRITTQDIIGRLKFILEEEKIPYDEKALMIVARAAEGGMRDAL
                     SLLDQVISYGSEEVAVEDALEITGSVAQNLLTKLVSAAFDGDAAEAISTLTALLAEGK
                     DPVRLVEDLLVFFRDVLLYQKAPNLEETLERALIDDDFVALAKRADSLKVYEFVKILN
                     TAQQQMRFSNHPGIYVEVALVQLTQAGKSVAGGGNVPADAASGSDVSDLKRQMEQMHQ
                     EIQTLKKQIASGAGAAPADKPTQNRGGSKKAINNGKQFKAPIGKINHVLGEAKKENLQ
                     LIRGCWGELLSMLMASQAALLNDAEPVAASQDTFVLKFKHEIHCQMAMDNPNFVETIT
                     SSIARLTQVNYTFIGIPEDQWADVRENFLHSHGSDGDAEDGANPEAKKPAEDPFVAEA
                     AKLVGEDLLEIKD"
     gene            16184..16501
                     /locus_tag="U0290_000098"
     CDS             16184..16501
                     /locus_tag="U0290_000098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbaB/EbfC family nucleoid-associated protein"
                     /protein_id="HEM2300167.1"
                     /translation="MRGMGNMQGMMKQMQKMQKEMAKAQADLEAQEFTGTAGGGMVTV
                     KATGKRVITDVVINEEVVDPEDIEMLQDLVLAATNDVLKQIEDTTSQTMGKFTQGLNI
                     PGM"
     gene            16610..17206
                     /gene="recR"
                     /locus_tag="U0290_000099"
     CDS             16610..17206
                     /gene="recR"
                     /locus_tag="U0290_000099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination protein RecR"
                     /protein_id="HEM2300168.1"
                     /translation="MHYPEPITKLIDSFMKLPGIGPKSAARLAFYVLDMKEDDVLDFA
                     KALVDAKRNLSFCSVCGHITDKDPCYICADTSRDRSVICVVQESKDVIAMEKMRDFHG
                     LYHVLHGTISPMDGIGPEDINIPDLLKRLQDDTIEEVILATNPNVEGEATAMYISRLL
                     KPSGIKVTRIAHGLPVGGDLEYADEVTLSKAMEGRREV"
     gene            17221..17466
                     /locus_tag="U0290_000100"
     CDS             17221..17466
                     /locus_tag="U0290_000100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaaL family protein"
                     /protein_id="HEM2300169.1"
                     /translation="MESRSNKFGRKKNKKIGKLHKSYDAYLMELIEVTQEKWHKQKVL
                     MRKSFEYDPNLEYEEKKAEARYFYLFKEARTRQLKNK"
     gene            complement(17512..18354)
                     /locus_tag="U0290_000101"
     CDS             complement(17512..18354)
                     /locus_tag="U0290_000101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2300170.1"
                     /translation="MTLSFSDTYRLNNGIEMPRHGFGVYKLTDEARMRTALETAVDVG
                     YRLFDTASFYHNEKELGDFFASSGLKRDEFFVTTKMWNTEQGYDETLRAFEKSQKKLQ
                     LDKIDLYLVHWPKQDTFFDTWRAVEKLYDEGLVRAIGVSNFEAHHLDRLRTSANVLPV
                     VDQLETHPHFPNHLLHRYLEELHIVHQAWSPLGRGGVLQEQILIDLAEKHGKSPAQIV
                     LRWHLQNNISIIPKSETPSRIRENAAIYDFELSEADMRQVERLNTGERVSHAPDVMYV
                     RSEI"
     gene            18470..18916
                     /locus_tag="U0290_000102"
     CDS             18470..18916
                     /locus_tag="U0290_000102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX pyrophosphatase"
                     /protein_id="HEM2300171.1"
                     /translation="MRQPFQVLVIPFIKTEANYQFGVLHRTDADVWQFVAGGGEDEEA
                     ISETAKRESIEELNLGVKVKMYSLDSHASIPNFHFSFNKPYVVPEYCFAIDLTSCSYQ
                     VTLSLEHSELRWVSYESAVQLLEWDSNKTALYELNERLKNNDMKAI"
     gene            complement(18944..19783)
                     /locus_tag="U0290_000103"
     CDS             complement(18944..19783)
                     /locus_tag="U0290_000103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2300172.1"
                     /translation="MTTQAIILDIDGTLLNDDKKISPETKKALITAQQNGVKLILASG
                     RPTTGMHVYAEQLEMEKHHGLLVSYNGAKVVDCATSEELFNQALTVEEGKAVLEHMKQ
                     FEVKVMIDKEDYMYTNDVYDCYVPYRGEVINIVQYESRGGNFKLCEKDDLAAFLDYRL
                     NKILTAGDPAYMQENYQAMMAPFKDTLNCVFTADFYFEFTAQGIDKAKALDTVLTPMG
                     IHAENVIAFGDGHNDITMVEYAGTGIAMQNAVPELKAAASSVTLSNNEDGIAHVLNSL
                     IPS"
     gene            complement(19902..20753)
                     /locus_tag="U0290_000104"
     CDS             complement(19902..20753)
                     /locus_tag="U0290_000104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2300173.1"
                     /translation="MNILIKIRELTNLTNSEKELANYILANPKKTLQCKPKELATAAF
                     VSAATIYRLINKLGLNGIGELKIEIASSLRETNEEKDLNYDYPILESDTPYQIMTNLN
                     QIYKGTIDETLNNADPEELVKIGEKLIQAKTIDVYAASANLFFAQNFKFQMQEIGVLV
                     NVPEEDYIQSLSAANSDENHIAIVVSYGGRSRTLQRVVKILSENNVDIILITSMQDNP
                     LVEFATHKIYMASAENHYNKVSSFSTRQSLLSIFDTLYSIYFNQNYEKNIQYKTTNYQ
                     KMNTELE"
     gene            complement(20859..21233)
                     /locus_tag="U0290_000105"
     CDS             complement(20859..21233)
                     /locus_tag="U0290_000105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HEM2300174.1"
                     /translation="MAKPYGVVIISHSKDVAKGVHDIIKEIAPDVSITHAGGTEDGRI
                     GTSFDAVNEAIESNEANKVYTFYDLGSAKMNIETVEEISEKEIILFNAPILEGAYATA
                     AQVQMDEKPEVIAANLKTIEIK"
     gene            complement(21237..21833)
                     /gene="dhaL"
                     /locus_tag="U0290_000106"
     CDS             complement(21237..21833)
                     /gene="dhaL"
                     /locus_tag="U0290_000106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit L"
                     /protein_id="HEM2300175.1"
                     /translation="MTYDKDWALRWLNDFGERVQENKQLLSDLDQAIGDGDHGINMAR
                     GLGELKKAFTEKEPADLKDVFKTAGMTMVSKVGGASGPLYGTAFLNMSKAVDSETIDA
                     EGLTKVLEAGLEGIEKRGKSHAGEKTMIDVWEPVVNALHQEDLTDDVVEAALQKTKDL
                     KATKGRASYLGERSIGHLDPGAYSSALLFHAMLQTEVS"
     gene            complement(21855..22844)
                     /gene="dhaK"
                     /locus_tag="U0290_000107"
     CDS             complement(21855..22844)
                     /gene="dhaK"
                     /locus_tag="U0290_000107"
                     /EC_number="2.7.1.121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HEM2300176.1"
                     /translation="MKKILNGTDQVVEQMVEGLVKSHADVVHRVEGTRVIARNDKRPG
                     KVGLVSGGGSGHEPAHAGYVGRGMLSAAVCGDVFTSPTPDQIYEGIKAADQGAGVLLI
                     VKNYTGDVMNFEMAADLADADDIKVEQIVVDDDIAVEDSTFTTGRRGVAGTVLVHKII
                     GAAAEAGASLDELKALGEKVIASVKTLGVALTPCTVPEVGHPGFELGDDEIELGIGIH
                     GEPGFTREKIMPSASLAKQLYERISNESKFLPGDKVVVLVNGMGATPLMEQYVFANDV
                     HELLKNAGVQVEKTLVGDYMTSLEMAGLSLTILKLEDEKWVDMLKLPVDTIAW"
     gene            23028..24407
                     /locus_tag="U0290_000108"
     CDS             23028..24407
                     /locus_tag="U0290_000108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEM2300177.1"
                     /translation="MRNQSKMPLVERLDAHAKSCPISLHVPGHKSGAIYPDAWQKFLK
                     WDVTEITGMDDLHHPEDVILEAEELLAECYGSKKSYFLVNGTSGGSLAVIMATLKHGE
                     KVLVPRDAHKSILHGIELAGGEPIFLTPATNEEVGVASGVTTELLEETLHNHPDIKLC
                     IFTYPSYYGTTFNLHKCIQIAHDFGAVVFVDEAHGAHFLTSSEFPKSAVELGADVVVQ
                     SAHKTLPALTMGSYLHVVNDLPIFEKLPYYLQVFQTSSPSYLIMASLDAARKYAATYT
                     AADVEAFWKMRARWIKWLTKNKFDVILPDDPLKIIVRKTGYTGYELQAIFEESSYFPE
                     LADESQVLLILPLIKKGIDFTPISRIHSPVKKEIAKEPYEMSAPFASGLALTYEEMHA
                     RATEFVLLDEATTRVSAETISLYPPGIPAIIRGESITEKHIRELKNIRTRHYQGGEKL
                     AENYIRVFR"
     gene            24460..25086
                     /locus_tag="U0290_000109"
     CDS             24460..25086
                     /locus_tag="U0290_000109"
                     /EC_number="2.7.4.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dTMP kinase"
                     /protein_id="HEM2300178.1"
                     /translation="MKAIFITLEGPDGSGKTTVGTLLNQKMTEAGIDFIKTREPGGSP
                     ISEKVRNIVLGIGNEEMDPKTEVLLIAGARRQHVVETIRPALAAGKTVLCDRFMDSSL
                     AYQGAGRDMNMEQVLQVNLYAIEDTLPDRTYYLDVPAEVGLARIAANKGREVNRLDKE
                     DITYHEKVQAGYEKVINMFPERFMRVDATKTPEEITETILADILRQLA"
     gene            25195..25524
                     /locus_tag="U0290_000110"
     CDS             25195..25524
                     /locus_tag="U0290_000110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP receptor"
                     /protein_id="HEM2300179.1"
                     /translation="MKLIFAIVQDQDSNRLSDALTKGNFGATKLATTGGFLKAGNTTF
                     IIGTEDERVEDALAIIKENCKAREQMMTPSASLGVTVDTYVPYPIEVQVGGATVFVMP
                     VESFHHF"
     gene            complement(25755..27530)
                     /locus_tag="U0290_000111"
     CDS             complement(25755..27530)
                     /locus_tag="U0290_000111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-beta-N-acetylmuramoylhydrolase"
                     /protein_id="HEM2300180.1"
                     /translation="MQKTRKERILEALQEEKKNKKSKKFKTGATIAGVTAIATSITVP
                     GIEVIVSADETAPADEASKSAEANTTKETPATATPENTTEPTVEAKQTETKEQTKTAE
                     ENQAAAKQVEKAPAEPATVSNPDNATSSSTPATYNLLQKSALRSGATVQSFIQTIQAS
                     SSQIAAENDLYASVMIAQAILESAYGTSELGSAPNYNLFGIKGAYNGQSYTKQTLEDD
                     GKGNYYTITAKFRKYPSYHQSLEDYAQVIRKGPSWNPNYYSKVWKSNTTSYKDATKAL
                     TGTYATDTAYATKLNDLISRYNLTQYDSGKTTGGNSGSTGNTGNSSNTGNTSNAKIYT
                     VVKGDSLWRIANNHKVTVANLKAWNNLKSDFIYPGQKLKVSAGSTTSDTNTSKPSTGT
                     STSKPSTGTSTNAKVYTVVKGDSLWRIANNHKVTIANLKSWNNLKSDFIYPGQKLKVS
                     AGSTSNTNTSKPSTNTNTSKPSTNTNTNAKVYTVAKGDSLWRIANNHKVTIANLKSWN
                     NLKSDFIYPGQKLKVSAGTTTNTNTAKPSTNKPSNSTVKTYTVKKGDSLWAISRQYKT
                     TVDNIKAWNKLTSNMIHVGQKLTIK"
     gene            27692..28258
                     /locus_tag="U0290_000112"
     CDS             27692..28258
                     /locus_tag="U0290_000112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2300181.1"
                     /translation="MITNESIMDATLCMMAKHGIKGSTTRQLAEAAGINEATIFKKFK
                     SKDNLIHMTLEVQFESMKAEINQFFDKDFESAKVFLRQASQFISDIYEKYRDFMVISV
                     REMGSKDMEFIDPSIVEYLYERVNQKVKEMVPSKNSAQEADAISLILNSVILLIMVEK
                     VRDDIYKRPPTITTTADSLADVLLKLLK"
     gene            28812..31382
                     /gene="mgtA"
                     /locus_tag="U0290_000113"
     CDS             28812..31382
                     /gene="mgtA"
                     /locus_tag="U0290_000113"
                     /EC_number="7.2.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium-translocating P-type ATPase"
                     /protein_id="HEM2300182.1"
                     /translation="MKKLHVKKQGNNLLKESQIGKEKVLEKLGVMETGLTNVEVTERL
                     AEFGPNQTVEEKKVSNLRLFIRAFNDPFIYILAMLMVVSYLTDDMEATVIMALMILAS
                     GILGFIQTSRAERASYALKNMVKNRVNVIRNGSMDLIMQDAIVPGDLIEISAGDIIPA
                     DARVISATDLLINQSALTGESIPAEKFVEDKSANPEIFERENLLFMGTDVLSGHGRAV
                     VLRTGSSTFFGSLSIAATERRGDTSFDKGVKSISKLLFYFMMVMVPIVFMINGLMKGN
                     WLEAFLYAVAIAVGLTPEMLPMIVSTNLAKGAINMSKKKVIMKELSAIQNIGAMDILC
                     TDKTGTLTEDKLELIKYIDSAGETSERVLKMAYLNSYFQTGWKNVLDHAVIAKLDEST
                     AAAWKKVGEIPFNFDRRRLSVVVENKAETRMITKGAVEEMLTVCTHKEFGGAVSTLSE
                     SEKSELQDMCAEMNRSGIRVIAVAYKTGRVGEAFTKTDEEQMIIAGFLGFRDPVKAST
                     KEAIAHLFKNQINVKVLTGDNEIVTKRICQEVGIPANGFLLGADIEELSDEELTRELR
                     KYHIFAKLTPMQKSRIIGLLKKAGHTVGFLGDGINDAPALRKADVGISVDTAADITKD
                     ASSVILLEKSLTVLNDAVMEGRNVFGNILKYLKMTASSNFGNVFSVLVASAFIPFLPM
                     LSLHLLLQNLLYDFSQLTLPWDKMDRSFLKKPHQWEQKGMLRFILCIGPVSSIFDIAT
                     FLIMWFVFSANTVAEQALFHSGWFVVGLLTQTLVVHMIRTEKIPFIQSRAAAPVMIAT
                     LSVMALGIIIPFTGFGHSIGFVSLPGSYFPWLILILVGYMATMQLVKTIYIRKFREWI
                     "
     gene            31383..32513
                     /locus_tag="U0290_000114"
     CDS             31383..32513
                     /locus_tag="U0290_000114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEM2300183.1"
                     /translation="MRAGRVLFVTYILLAIWSLLLVYSTSYGVAVMRYKVEPSYFFHR
                     QLLFYGLGFLGLLVCSRINVQLFYLRRTLRILAGSLLGLLLLVLLTGSAANNAQRWLS
                     IAGVTFQPTEMVKLLLILVIATVFLKKGCGVRVQYWLLGFLFLTVGLVFLQPDLGTAL
                     ILGVIGVALFLTSGVGLTRLVRVAIWSFGLLLLVAMLLYFFHPDFFSSAKLGRFAFLD
                     PFNLDNLDASYQLRNGYYAIGSGGIFGNGLGGSIQKLGYLPEPHTDFIMTVIAEELGV
                     FGVIWTIFLLMMLSFTALYIAISSHFIFDSMVCIGVSSWVSVQTFLNLGGVSGIIPLT
                     GVPLPFISYGGSSVVMLSCAVGFVLAAARRNVLAKTREVVYL"
     gene            32510..33631
                     /locus_tag="U0290_000115"
     CDS             32510..33631
                     /locus_tag="U0290_000115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEM2300184.1"
                     /translation="MKRDVLYNRIILSVFLLSLVSCVAIYYAQQTNQYNTNFLGMQLV
                     FLAIGTLTCFGVSRLPVEFLRHHAIWLYVIMVITLLGILIPNPLVQNINGATRWYRFA
                     GLSFQPSEVVKSIFIFVLAHFAVKYQAQKWKQLGILTVLTGIVLLLIMKQPDLGTTIV
                     YGVTALAIILLAIKSTKLMVGIITLILTAATVGMYVVVYHISLLEKIGFHAYQFSRIQ
                     TWLDPTTDPDAVYQLNLSIKAVGSGMMTGSSGTNAYIPESHTDMIFSTIGHQFGFVGV
                     SLLLILFMLLIHQLIMAALLMKNTFSSLVLAGFAVSFAFNIFENIGMTVGLMPLTGIP
                     LPFISYGGSAVLGNFIAVGVVLAIIRSDADLIEEKNQLS"
     gene            complement(33653..33955)
                     /locus_tag="U0290_000116"
     CDS             complement(33653..33955)
                     /locus_tag="U0290_000116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2300185.1"
                     /translation="MDLEQTIMSLIVFGGNAKSDAMLAIDSAKKGDFAQADEQIAQAE
                     QALLEAHHSQTKLIQGEARGEKTEVSLLLVHAQDHLMNAITFKDLAKEIVDLYKNK"
     gene            complement(33992..35299)
                     /locus_tag="U0290_000117"
     CDS             complement(33992..35299)
                     /locus_tag="U0290_000117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2300186.1"
                     /translation="MNGFIAFMEKYFIPYAAKIGGQRHLVAIRDGFITTMPLMILGSF
                     AVLINNFPIPAYQKFMNNLFGEGTWQAFGGNVWNGTFAILALLIAFTVAYNLAKSYDK
                     DPLSSAVVSVATFFTIGAIAPGADGVANTGGLGSTGLFLALIIAILSTEIFTRLSGSP
                     KLIINMPDGVPPAVSRSFAALFPAMITVSIFGLITAFFQAAGVTNLVISFYELVQEPF
                     MGLANSLPAALLLAFVSAFLWFFGLHGANIIDPFMQTINIPAIEANVKALEAGKELPY
                     IVNKPFFDSFVNLGGTGATIGLIIAIFIVARKHKAYMTVSKLSAAPGIFNINEPMMFG
                     LPIVLNPIMFIPYILAPLVLVTVAYFATAIGWVPACTIVTPWTTPPIIGGALATQSIA
                     GGVLAAVNLGLSILIFLPFAKIAQIQELRREKEALAAEGVTAE"
     gene            complement(35434..35739)
                     /locus_tag="U0290_000118"
     CDS             complement(35434..35739)
                     /locus_tag="U0290_000118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2300187.1"
                     /translation="MKTIMLVCSAGMSTSLLVTKMEKAAAEKGLEAKIFAVAEAEAAN
                     HLDEIDVLLLGPQVRFLEGNMKKKLEPKGIPLAVINSVDYGMMKGDKVLEQALELMK"
     gene            35993..36082
                     /locus_tag="U0290_000119"
     CDS             35993..36082
                     /locus_tag="U0290_000119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015455298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit F"
                     /protein_id="HEM2300188.1"
                     /translation="MGVVLVIAGIIGLGLLVYLFYVLFRGEDL"
     gene            36079..37764
                     /gene="kdpA"
                     /locus_tag="U0290_000120"
     CDS             36079..37764
                     /gene="kdpA"
                     /locus_tag="U0290_000120"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpA"
                     /protein_id="HEM2300189.1"
                     /translation="MKYIVMQDAFFVVLLLVLAVPLGIYMYKVMIGEKVFLSRVLEPV
                     ERFGYRLMGVSEVGMSAKRYAVSVLAFSAVGFVFVMAVLMLQGFLPLNPEGMKGLSFS
                     LAFNTAASFVSNTNWQAYSGEAALSYFSQSIGLTVQNFVSAATGIAVLFAVIRGFIWK
                     KQKTIGNFWQDLFRVTLYILLPLSLILALLLVSQGVVQSFADYSVVETLENGAKQLIP
                     LGPAASQIAIKQLGTNGGGFFGANSAFPFENPSSFTNLIEMLAILLIPVALVVMFGRA
                     VKDSKQGRAIMTAMMIVFVIGVVAITISEQFAGPHYQGVATSGSMEGKEVRFGVGGSS
                     LFAASTTAASNGAVNAMHDSLTPLGGLVPMFFMQLGEVVFGGVGSGLYGMIGFIILTV
                     FIAGLLVGRTPEYLGKKIEPYDMKMVCLLILVPPLLTLFGTAVAVMMPSVQASVSASG
                     AHGFSEVLYAFTSMGNNNGSAFAGFAADTTFTNMVGAVMMLLARFIPLVAALYLAQNM
                     AGKSSVAASSGTLSTKNGMFIGLLIGVVVLVGALSFLPALALGPIADFFTTFK"
     gene            37776..39821
                     /gene="kdpB"
                     /locus_tag="U0290_000121"
     CDS             37776..39821
                     /gene="kdpB"
                     /locus_tag="U0290_000121"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium-transporting ATPase subunit KdpB"
                     /protein_id="HEM2300190.1"
                     /translation="MMEKGIWKDALIQSTKKLSPKLQVKNPVMLLVYVGAILATSLYF
                     LGFFGISDEKSGYTLAIALILWFTVLFANFAEAIAEGRGRAQADSLKMARKDVLARKL
                     KNIDDKTDVIEIASNDLKKGDIVYVLANEQIPMDGEVIEGAASVDESAITGESAPVIR
                     ESGGDRSAVTGGTTLVSDWLVVRVTAVSGESFLDKMIAMVEGASRKKTPNEIALQILL
                     VTLSIIFLAVSATLLPFTEFASKQAGAGSAISITNVIALLVCLAPTTIGALLSSIGIA
                     GMSRLNQANVLAMSGRAIEAAGDVDVLLLDKTGTITLGNRKASEFLPVDGVTEQELAD
                     AAQLSSIADETAEGRSIVVLAKERFDIRGRDFAEMHAEFVPFTATTRMSGIDYQENTI
                     RKGAADAVRAYVTANGGTYPKECDAIVSKVAGAGGTPLVVVRNNKVLGVIYLKDIVKN
                     GVKERFLDLRKMGIKTIMITGDNPMTAAAIAAEAGVDDFLAEATPEAKLELIREYQRE
                     GHLVAMTGDGTNDAPALAQADVAVAMNTGTQAAKEAGNMVDLDSSPTKLIDIVRIGKQ
                     LLMTRGALTTFSVANDLAKYFAIIPVLFYGIFPQLEALNLMGLTSPTSAILSAIIYNA
                     VIIIILIPLSLKGVKYREMPAGKLLSRNMLIYGLGGLIAPFIAIKLIDMLLTVLGIV"
     gene            39836..40408
                     /gene="kdpC"
                     /locus_tag="U0290_000122"
     CDS             39836..40408
                     /gene="kdpC"
                     /locus_tag="U0290_000122"
                     /EC_number="7.2.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="K(+)-transporting ATPase subunit C"
                     /protein_id="HEM2300191.1"
                     /translation="MKRFMQIWKPAVVGFLLLTLMCGVVYPGIVTIFASAAFHDKANG
                     SIIEEKRADGTTGKVGSAEIGQTFTKPEYLIGRAASDGVATNLNPTSEEQKQLVEKRI
                     AWWHKLDPTNNRVIPMDLVTASASGVDPDISEAAAAYQVDRISRERGISTKQVKEIIA
                     EHTSDRLLGFWGEPTVNVLQVNLALDRLKM"
     gene            40424..43114
                     /locus_tag="U0290_000123"
     CDS             40424..43114
                     /locus_tag="U0290_000123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase KdpD"
                     /protein_id="HEM2300192.1"
                     /translation="METNRPSPDALLVNLQEETDSSVGKLKIYFGFAAGVGKTYAMLS
                     DAKDQLAAGVDVVAGYIEPHAREETLRMLEGIPIIPPKAITHKNIALKEFDLDEALKR
                     KPELILVDELAHTNASGVRNKKRFQDVEELLQAGIDVYTTVNVQHIESLNDIVEGITK
                     VAVRETIPDYVFDEADRVKLIDIEPDELLKRLEQGKIYQPARAKTAMQNFFTRENLKL
                     LREIAMRKAADRISHEYDQTGVYPEKRASSKWLVCIGTSPSSAKLIRWTARTAEAFRA
                     PWTALYIENEENDYMTKAEKKCLRETMELAERLGAEIVTLAGHDIAETVAEYARLTGV
                     TNIVVGKSRRRMGLRSLFEDDFEDRLITHLDNVDMHIIPSSQPKTKKRRMKMRFKSFL
                     TWHDMAKMILLLTLATAICVGLSEFGIGDQNVIMVYILSVLIISRVTSGYVYGVMGSI
                     IGVMLFNFFFTTPLYTFNTIQAGYPVTFGIMLLVALITSALTVRIKTQASLAVERERR
                     TEVLYEINKRLLVTRNLKGIIDLTNEYILHLFSRSVIFYSADPAKSNKGIFVQAEGKE
                     DASALLSADEEAVAHWVFKNKKRAGAGTDTLMGAFGYYMPVMSQGKVLGVIGVSCSPE
                     DGPLTQDNRIFLRMISSQVALALERQYLSEEQRQIVIESAKEKMRSNLLRAISHDLRT
                     PLTGIVGASSALLEKETELDKETEHNLIKGIKDDSGWLIRMVENLLSVTRISEGLVSL
                     ERAPEAVEEIVGEAVGRIKKRFADRTIHVKVPRDLLMVPMDGTLIEQVLINLMENALR
                     HGGTGAEVWVDVTKTKQSAIFSVRDNGKGIPEKRLPDLFDTFAVEARERSDMSRGLGL
                     GLSICMSIIRAHDGTLEAKNNKHGGATFWFTLPLDGGDGK"
     gene            43111..43806
                     /locus_tag="U0290_000124"
     CDS             43111..43806
                     /locus_tag="U0290_000124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2300193.1"
                     /translation="MNSKRLVLIVEDEEGISNFISAVLTASDYSVIKAVNGKEALEQT
                     ASHSPDVVLLDLGLPDVEGLDVLRDIRVWSKVPIIVVSARDHEREKVTALDLGADDYI
                     TKPFGTSELLARIRTALRHIQPSSKEAPNDHIIRIQDLYIDDDRRLVKMGDKEIHFTP
                     IEYKILLLLARHAGKVLTHDFIIREIWGPYPSENQALRVNMSNIRRKIEQNPAEPAYI
                     LTEVGVGYRMAEE"
     gene            43847..44659
                     /locus_tag="U0290_000125"
     CDS             43847..44659
                     /locus_tag="U0290_000125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2300194.1"
                     /translation="MHKTIRSVDVYYEKYGEGIPIIMIHGFGPDSQLMIGCMEPVFDK
                     ESPFSRIYVDLPGMGKTENYDSIQNADHVLTLLLEFIEAVIPGEQFVLAGESYGGYLA
                     RGIAAKMPDRVLGVLLICPVIYPEKERRTLPEQKVMYQDDTFVRSLSKEDRAYFSKSG
                     VILTARNWNRFLAEVMAGMINADGEFLDRLSANYALSFDPDEKAQFDVPALFLFGRQD
                     DHVGYADGLTLLEKYPHASIAILDFAGHNLQIEQPKIFTTMVEDFLFRVKPE"
     gene            complement(44661..45917)
                     /locus_tag="U0290_000126"
     CDS             complement(44661..45917)
                     /locus_tag="U0290_000126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Y-family DNA polymerase"
                     /protein_id="HEM2300195.1"
                     /translation="MHRAVIFCASILNRFFASVECVKRRLNPLEAYLVVMSNADRAGG
                     LVLAATPKMKQEHHIKTGSRMYELPTWDKRIIIAPPRMKLYLKVNAMIQAIFRRYVPA
                     EFIHVYSIDECFLDITGSHLLFGSTEEIVRKIQCDILEELRLYVTVGIGDNPLLAKLA
                     LDNVAKNRDDGIAEWRYEDVPETIWKIRHLDDVCGIGRRTAVRLQKMGIFNMYQLSQT
                     PPQVLKNAMGVVGEQLYYHAHGIDYSLLNEKYVPVSKSYGKSQILEKDYHVPAEVEIV
                     IREMVEEVAMRLRQNHVDTAVIHLSIGYSKYSIKKGFSHQAKIPPTSSSHALIPYFLQ
                     LFRRYDEREPVRSIAISCGKITLKTGLQLNLFEDATRTLNHEQLEITVDKIRSRYGFK
                     SLMHASSLLNGATGLKRSEMVGGHKG"
     gene            complement(45930..46271)
                     /locus_tag="U0290_000127"
     CDS             complement(45930..46271)
                     /locus_tag="U0290_000127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300196.1"
                     /translation="MSYQDRGMKKWGGFLLSEHTEAMQDAEPTLVWKEAMTTEFIESV
                     LASAMTHQSTLVIQKKPLNPESAPENDIIGRISGVENNTIYIKNSEGTVPLSFSAIRN
                     VEERSVEKWYK"
     gene            complement(46470..46925)
                     /gene="rpiB"
                     /locus_tag="U0290_000128"
     CDS             complement(46470..46925)
                     /gene="rpiB"
                     /locus_tag="U0290_000128"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEM2300197.1"
                     /translation="MTVSKVAIASDHGGIELRKSIISYLESVGISYEEFGPEAPESVD
                     YPGLAITVSEKVVNQEVDRGILVCGTGIGMSIAANKVKGIRCALVGDTFSAHATREHN
                     DTNVLALGARVIGPGLAEDIVKIWLETAYEGGRHANRVGQITAYEDSQA"
     gene            complement(46971..47441)
                     /locus_tag="U0290_000129"
     CDS             complement(46971..47441)
                     /locus_tag="U0290_000129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEM2300198.1"
                     /translation="MSAYKRILVGVDGSNEAEAALRRAVQFAKMDGATLGIGFVADVR
                     RIAPLIDYEQTYAKKAKAYGEELVEMYKKEAEKAGVSHVETFVHFGTPKTTFNKKITR
                     NFEPDLILVGATGLSATEQFILGSVSEYTAAHAPCDVIIVHAKPWRNRKTVEKL"
     gene            47557..48363
                     /locus_tag="U0290_000130"
     CDS             47557..48363
                     /locus_tag="U0290_000130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM2300199.1"
                     /translation="MAKLETFYPIVATPKRAGYKEYLPSAVLTGYIRCFWEADDKNFP
                     GNNLVVPDLCADIIFTIDSKTGLVTDAIFVGVSDAPFESDDESNTELFAVRFYAWSLF
                     LFVEQDLTGSMNRVKEPEEMFAGFVSFFQERFAEMTTNMERIALLEEFLLRKLMMLGK
                     QVHPDFLNGIDKLLQNPNQLALGAVSVRQLERLFQKHMGLAPKQTAKLIRFQKVLQAL
                     YENPSVPGAELAYLHGFTDQAHLIKQFKRYSNHTPEEMKQIFLQNVANIQ"
     gene            48409..48777
                     /locus_tag="U0290_000131"
     CDS             48409..48777
                     /locus_tag="U0290_000131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2300200.1"
                     /translation="MINEFVCTNISTQDPAALVAFYHEKLGIPIVFEGYDNYDGAKLG
                     FSEKAPGIIVWNNSKWGEASESKVEFVFSCDTNLDEMYRELQTAGVETPEPRVAEWGG
                     RELNLLDPDGNKIMILEPAQ"
     gene            48774..49136
                     /locus_tag="U0290_000132"
     CDS             48774..49136
                     /locus_tag="U0290_000132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEM2300201.1"
                     /translation="MSDEFAWIQKEISGLKGVQYSFKEEWGAERYHVLDQLMAMRGTN
                     KEGQPILTLKCDAEKSEQLRAENRAIVPGYYMNKRVWISVLLEEERDKDLIRALIQHA
                     YSEAKNKLPKYKQAELFD"
     gene            49210..50022
                     /locus_tag="U0290_000133"
     CDS             49210..50022
                     /locus_tag="U0290_000133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300202.1"
                     /translation="MDINMFILYFFIYSVLGWAWEEIFCSISEKKLVYRGFLYGPYCP
                     IYGFGVTTVLMMILPFQNNLWALFIFSMIICTVIEYVTATILEALFHTTWWDYHNWPL
                     NVKGRICLPISIFWGFACIIVVRFLHPLVTEFADWILSWGGWIIPALIVVLMLIDTIK
                     SVTSMLSFQKALAEFNEKLTAQANELKASVKERAKEFEEGLLKKQENVDMKIAEIEAK
                     RKQDKELAASMRKLKFNERRMLKSFPKMKVKRAAPFKNFNKSLLRVDKQKRK"
     gene            50392..52461
                     /locus_tag="U0290_000134"
     CDS             50392..52461
                     /locus_tag="U0290_000134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2300203.1"
                     /translation="MYLDERSNSLLKELLRHPDTSSTNLQAKFGLTRRQVDYSFQKIN
                     NWLEEQTYPKIHRAANGRFIVEPDLFQIIGEEDGEKTDWYIPSEKERASLIILMLTTG
                     SEELSLNHFISELEVSKNTVLRDLKLVQKTLEKFNLEVKYSRMRGYLIDGDEWNQRTA
                     LIYAAEHIIESFGGEEYLQDFMQVDEARIKELREKLEQVEHHLNLHFIDNKMQILPYI
                     LEAVFRRMKKGQTITTSFLIDYNELSDTREYGAAEIFIEEEPNMPEAERMYITLQLLT
                     SNVLPKQYLKSEETHKLRLALEQVLSEFEKKACIQLVDKESLLEKLFAHIKPAYYRIK
                     YHLTTDYSILDKIDQEFQAVHYIVKESLAPLERFIGSKVPENESIFITLFIGGHLIES
                     TEKLQTRLKAVVVCPNGLSISRLMEKTLRSLFPEIFFYQAMSIREFEQTKLGYDIVFS
                     AVPLSTDKKFFLINQLMDGKERLELRRRVMRAVYLVDEVNISVDQLMKTISKFADIKD
                     AARLEKVLADYLMPVPEENTSKHEGKSTLADLLEVTRITRKKSVKDWHEAIYHAALPL
                     LSAGVVEPAYVEEMKRQYPAPIMNIILRNTIAIPHAETEKGVNSLGMSLLYLEEGLPL
                     EGGKELHFIVVIAAIDKNAHFTALLQLMELSENKKELKKLADAANTEEMHQIIKNFTD
                     LETKKTM"
     gene            52495..52959
                     /locus_tag="U0290_000135"
     CDS             52495..52959
                     /locus_tag="U0290_000135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2300204.1"
                     /translation="MDLVQFLKKGMVWVQSDIEKQEDLFQMVAESGKSEGYVTDDFLT
                     RLTDREQTFPTGLKLDGYGVALPHTDPECVTEQFIAVITVKDGIPFKLMEDAGQTVEA
                     NLIFVLGLNEPHSQLAVLQQLMGTIQDKDNVAALLRAKDEDEVKQILETITV"
     gene            53017..53298
                     /locus_tag="U0290_000136"
     CDS             53017..53298
                     /locus_tag="U0290_000136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2300205.1"
                     /translation="MGQFKILVACGAGIATSTVVTDRVERLVKENNVDAEVKQIKISE
                     AASMQDGADLIVSTTILPTTYKIPAIIATSYITGMGMEELDEEILAHLK"
     gene            53359..54630
                     /locus_tag="U0290_000137"
     CDS             53359..54630
                     /locus_tag="U0290_000137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466187.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HEM2300206.1"
                     /translation="MDTLLSGVQYVLNLGPTVILPIMIFFIALIFRVPAKKALRSAIT
                     IGIGFVGINLVISLLSSNLGPAAQQMVERFGLNLTIIDAGWPAAAAASWASPVAAILI
                     PICLVVNLALIFFKVTKTLDIDIWNYWHFIAAGATGYIVTGGNWWFAILCAIIYEVAV
                     LWMADRTQPMVEEFYGLKGISLPTGSTAAFGFIGIPVGWLIAKIPGIKNIHVDPETIQ
                     KRFGIFGEPMMMGLILGIAIGILAGYDVGAVAQLGMSMGAVMFLMPRMVKILMEGLIP
                     ISESAREFMKSRFKGRELYIGLDAALSIGHPANISTGLILVPITLFLAVIIPGNKVLP
                     FGDLATIPFYVSFVVASRKGNILHSVLAGTVVIALALLMATDFGLVHTEMMKGVYEFP
                     KGATQVSTLDMGGNFFNWVILKFSQAWAAIF"
     gene            54667..55719
                     /locus_tag="U0290_000138"
     CDS             54667..55719
                     /locus_tag="U0290_000138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HEM2300207.1"
                     /translation="MRAAVLYENNVIKAEQIDEATCGKDQVRVEVKAVGICGSDIHKM
                     QTRWKYPLPAVMGHEFAGVVTEIGSEVTNVAIGDRVAGIPLEPCMECNYCKAGDFALC
                     DNYRMVGSHFHGGFAENVVMKADNVISIGDLDFEEGAMIEPLAVSMHGVLGIQPRLGD
                     TVIVFGIGTIGILVVQCLLLAGVKDIIAVDISDKKLADAREFGCKYTINPKNEDLKER
                     VFAYTNGLGADIALECAGSKITQEQCLLVTKKKGKVGFLGIAYADVLLHEEAFENIFR
                     RELTLKGFWNSYSAPFPGEEWRTSIEFVKQGRIKLKPLISHRYKLEETKEAFDMILSR
                     EHDYNKVMILPQKGDD"
     gene            55721..56752
                     /locus_tag="U0290_000139"
     CDS             55721..56752
                     /locus_tag="U0290_000139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding dehydrogenase"
                     /protein_id="HEM2300208.1"
                     /translation="MKAVVKTNPGYDQMELRDVEEPQVYGDKVKIKVAFTGICGSDIH
                     TFKGEYKNPTTPVTLGHEFSGVVVEVGPDVTSIKVGDRVTSETTFETCGECIYCKERD
                     YNLCSNRRGIGTQANGSFAEFVLSREESCHVLDERISLEAAALTEPLACCVHSALEKT
                     TIRPDDTVLVFGPGPIGLLLAQVVKAQGATVIMAGITKDSDRLRLAKELGMDRIVDTL
                     KEDLAEVVLGMTDGYGAERVFDCSGAVPAVNQGLPLTKKKGDFVQVGLFAEKKNAIDE
                     ESIIQREIAYIGSRSQKPSSWILALDLLANGKINTDKMITKVYGLDDWREAFEAVMAG
                     NEIKVLVKS"
     gene            56947..57387
                     /gene="rpiB"
                     /locus_tag="U0290_000140"
     CDS             56947..57387
                     /gene="rpiB"
                     /locus_tag="U0290_000140"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEM2300209.1"
                     /translation="MKLTIGCDHGGRRLKDAIVKHLREKDIEVVDIGTYTDESVDFPS
                     YAEEVANQVVSGQSELGILCCGTGIGMSIAANKVDGIRAAVVSDTFSARATREHNNSN
                     VLCLGERVIGEGLALLIVDTWLEASFAGDRHKRRLDKITELERK"
     gene            57396..58070
                     /locus_tag="U0290_000141"
     CDS             57396..58070
                     /locus_tag="U0290_000141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM2300210.1"
                     /translation="MRKIAASIMCADQLHLGEELRRLESAGVELLHCDVMDGVYVNNL
                     ALGPEYLEIVRNNTEIPLDIHLATITPLKYIDMFGPVKPEYISFHVEVAEDVSEVIRK
                     IRSYNVKPSIAINPETPIEAIYPYLDDVEMVLMMTVNPGFAGQKFQTDVLQKLHDLKA
                     KLAGKVHAPLIEVDGNINKETVGLMRDCLPDIYVLGTSALFHDRDKTSYAERLVHIWS
                     DVEKHV"
     gene            58104..60119
                     /gene="tkt"
                     /locus_tag="U0290_000142"
     CDS             58104..60119
                     /gene="tkt"
                     /locus_tag="U0290_000142"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM2300211.1"
                     /translation="MKKTLDRQAVDTIRSLSIDMIEKANSGHPGMPMGAAPMAYMLFA
                     KHLVFNPANPEWFNRDRFVLSAGHGSALLYSMLHLFGYDVKMEDLKQFRQLDSLTPGH
                     PEFGWTAGVDATSGPLGQGIGMAAGMALAESHLAAEYNQPNYPIVDHYTYAICGDGDL
                     MEGVASETASLAGHLGLGKLIVLYDSNDICLDGDLSATFSENAADRFRAYGWQVLRVE
                     DGNNLAAIQEKIVQAKLETSKPTLIEVKTVIGYGAPTKAGSSASHGAPLGEKEANGAK
                     EHYEWAEEPFTVPAEVRDYLRNYKARGEKLEGAWNTMLANYKKEFPELASQLDRVLAG
                     EVAADWNANLPTFEAGTNVATRSASGKMINAIAAELPELFGGSADLGCSNKTFIDASP
                     AYSIQDPAGKNIWFGVREFAMGAMLNGMALHSGLRVFGSTFFVFSDYVRPAMRMAALM
                     QLPVTYVFTHDSIAVGEDGPTHEPIEQLASLRAMPGLTVIRPADAKETRAAWEIAATN
                     TNGPIALVLSRQDLPVLENAQEEVDAGVDKGAYIVAPANSSKPDAIIIATGSEVSLAI
                     EAKAELAKKDIDVSVVSLSSWERFEKTTDAYKESILPKEVTARFAIEAGATFGWKEFI
                     GSEGDMLGIDHFGASAPAKDLFNAYGFTPENVADRVETVIAKAGVRV"
     gene            60116..60760
                     /locus_tag="U0290_000143"
     CDS             60116..60760
                     /locus_tag="U0290_000143"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM2300212.1"
                     /translation="MTFVAPSLLAADYMNMANSIKEAEHAGADYLHIDVMDGHFVPNL
                     TFGIDMVEQIKKTATIPLDVHLMLSNPENYIEKFAAAGAHIISVHIEAAPHIHRVIQQ
                     IKAAGCKAGVVLNPGTPASVLDAVLADVDLVLQMTVNPGFGGQAFIDSTIKNMRYLDH
                     WRRENNGSYVIEVDGGVNAETAEKCKQAGVDVLVAGSYFFRADDKIACIKELKA"
     gene            complement(60816..62285)
                     /locus_tag="U0290_000144"
     CDS             complement(60816..62285)
                     /locus_tag="U0290_000144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2300213.1"
                     /translation="MLQRRFWGIFCFAIFLFLFPTIGSAETSGDYEYTINGNEATITD
                     YTGQSTDITIPTTLGPNNEYTVTAIGNGAFKSKRLTNVTIPNTVITIGDGAFTINSLE
                     QLVLPNSVQTIGRNSFSVNKLEKITYSTALKNIPSQAFLANNLKTVTTPATVESIDAS
                     AFENNFITNITIQNPNLQMAYQAFAAQTVLSTLIVPSNHILPIENYIQFQDASAHLTT
                     DNLFITDLANGITYNQAEKALNFSAEPLESTFSLFTGTNRFDSYYDISEYGPSGKPFI
                     YFKYTKPVLVSYKDASGNELATSTRLDGSIGENYVTTPKIIDGYTLKETPGNATGQFS
                     ETLQNVTYIYEKTAVQNGTVTVKYQDESGKTLAKDTVLTGEVINTYQTKSKDIAGYKL
                     QKVEGNESGTFSTTPATVTYIYEKIANSDNTNTNGEMTDNTTLSTNDTVISSEATKKV
                     DKNTSNILPTTGDSKDALFFALGSLLTLLSTSFFFFKRS"
     gene            62445..62924
                     /locus_tag="U0290_000145"
     CDS             62445..62924
                     /locus_tag="U0290_000145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2300214.1"
                     /translation="MTQLVFRNGTEQDTTLILRFITELAIHEGIEKDVVATESGLHKA
                     LFQEKSAEVIIAEYEGEPVGFALFFHNFSTLLGKKGLYLEDLYIIPEMRGKGFGTKFF
                     SYLSKLALSRDCGRFEWWCLNENKSGMDFYEKIGAEKMSEWTVHRLTKAEMKKISNL"
     gene            62940..64337
                     /locus_tag="U0290_000146"
     CDS             62940..64337
                     /locus_tag="U0290_000146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyguanosinetriphosphate triphosphohydrolase"
                     /protein_id="HEM2300215.1"
                     /translation="MKWDKLLNDKRRRESGVTRSKNTDVRSAFENDFQRIVMSASFRR
                     LQDKTQVFPLEKSDFVRTRLTHSMEVSTIAKSMGNMVTHTIQEENLDKDFTKDHADKI
                     PEILACAGLLHDMGNPPFGHFGEESIREWFRDNLATITYKNKNLAEILTPQMKEDFYY
                     FEGNAQVLRVVSKLHYLFDQYGLNLTFATLNAVIKYPVSSLKVNKKQIKSKKLGYFYA
                     DESLFNEITTATEALDNRHPLTYLLEVADDIAYLNADLEDGVKKGIVNITQILKGFEE
                     VEEHNKVTAACYNELKKKSERYEGQEESFIVQQWLASNVRGQLINRSLEVFYENYDAI
                     MAGTFNDSLIDASSAEQLVQILQSLSFTYIYQDKGIVESEIAGNEIISKLLETFIPAV
                     IYYDSETPERQTAKDKRLLTLISDNYLGCYRKNAEGESETMKLYLRLLLVTDFICGMT
                     DSYAKDLYQRLNGLS"
     gene            64530..64943
                     /gene="rpsL"
                     /locus_tag="U0290_000147"
     CDS             64530..64943
                     /gene="rpsL"
                     /locus_tag="U0290_000147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S12"
                     /protein_id="HEM2300216.1"
                     /translation="MPTINQLVRKPRQSKIKKSTSPALNKGLNSFKRELTDVNSPQKR
                     GVCTRVGTMTPKKPNSALRKYARVRLSNGIEVTAYIPGIGHNLQEHSVVLIRGGRVKD
                     LPGVRYHIVRGALDTAGVENRGQSRSKYGTKKPKK"
     gene            64974..65444
                     /gene="rpsG"
                     /locus_tag="U0290_000148"
     CDS             64974..65444
                     /gene="rpsG"
                     /locus_tag="U0290_000148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_013054923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S7"
                     /protein_id="HEM2300217.1"
                     /translation="MPRKGPVAKRDVLPDPIYNSKLVTRLINKMMVDGKRGKSQAILY
                     SAFDIIAQETGKDPMEVFEQAMKNIMPLLEVKARRVGGANYQVPIEVRADRRSTLGLR
                     WLVNYARLRGEKTMEVRVAREIMDAANNTGASVKKREDTHKMADANRAFAHYRW"
     gene            65510..67597
                     /gene="fusA"
                     /locus_tag="U0290_000149"
     CDS             65510..67597
                     /gene="fusA"
                     /locus_tag="U0290_000149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G"
                     /protein_id="HEM2300218.1"
                     /translation="MAREFSLEKTRNIGIMAHIDAGKTTTTERILFYTGRIHKIGETH
                     EGASQMDWMEQEQERGITITSAATTAQWKGYRVNIIDTPGHVDFTVEVERSLRVLDGA
                     VAVLDAQSGVEPQTETVWRQATTYGVPRVVFVNKMDKIGADFLYSVGTLHERLAANAH
                     PIQLPIGAEDTFEGIIDLIEMNALYYEDDLGNDPHIKEIPADLKDLADEYRGKLVEAV
                     AELDEELMMKYLEGEEITKEELKAGIRKGTLNVEFYPVVCGTAFKNKGVQPMLDAVLD
                     YLPAPTDVPAINGVLPDGEEAARHADDSEPFSSLAFKVMTDPYVGRLTFFRVYSGTLN
                     SGSYVQNSTKGKRERVGRILQMHANHREEISIVYAGDIAAAVGLKDTTTGDTLCDEKE
                     QIILESMEFPEPVIQVAIEPKSKADQDKMGQALAKLAEEDPTFRAETDQETGQTLISG
                     MGELHLDILVDRMRREFRVEANVGDPQVSYRETFRKSAQVEGKFVRQSGGRGQYGHVW
                     IEFGPNEEGKGFEFENAIVGGVVPREYIPAVQAGLEGALDNGVLAGYPLIDIKAKLYD
                     GSYHDVDSNEMAFKVAASMALRNAAKKCDPVILEPMMAVEVVIPEEYLGDIMGNITSR
                     RGRVDGMEARGNAQVVRAFVPLANMFGYATHLRSGTQGRGVYTMQFDHYEEVPKSIAE
                     EIIKANGGNNKED"
     gene            67706..68893
                     /gene="tuf"
                     /locus_tag="U0290_000150"
     CDS             67706..68893
                     /gene="tuf"
                     /locus_tag="U0290_000150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Tu"
                     /protein_id="HEM2300219.1"
                     /translation="MAKEKFDRSKPHVNIGTIGHVDHGKTTLTAAITTVLAKKGYADA
                     QAYDQIDGAPEERERGITISTAHVEYQTDSRHYAHVDCPGHADYVKNMITGAAQMDGA
                     ILVVSAADGPMPQTREHILLSRQVGVPYIVVFMNKCDMVDDEELLELVEMEIRDLLTE
                     YEFPGDDIPVIKGSALKALQGEADWEAKIDELMEAVDSYIPTPERDTDKPFMMPVEDV
                     FSITGRGTVATGRVERGQVKVGDEVEVIGIEEESKKVVVTGVEMFRKLLDYAEAGDNI
                     GALLRGVAREDIQRGQVLAKPGSITPHTNFKAETYVLTKEEGGRHTPFFNNYRPQFYF
                     RTTDVTGIVTLPEGTEMVMPGDNIELAVELIAPIAIEDGTKFSIREGGRTVGAGVVSN
                     ISK"
     gene            69048..71114
                     /locus_tag="U0290_000151"
     CDS             69048..71114
                     /locus_tag="U0290_000151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2300220.1"
                     /translation="MVQFDARNMALLESLVVANVYLAPEKLQEELGISKRTLQYDVEK
                     INKELDNIGLDGIQSVRGQGYYLLEDEKSTIKEILGNREASHKVFSASERRIRILFFL
                     LVTDARVIIDTINECNEVSRNTSLQDIKQLKLALKQFNLELAYDRKNGNMVLGDERSI
                     RQFFIHYCMNNEEIATADQLLDLMKINPMIKNQELFPKLDTIFEILAVTEKKIGIRYT
                     DEVLERIGIMIFFFKERMKRNCYLNEQEEHEVESFEIAQEIYQQLQQSENFKINHAEI
                     TYLGKLLLGASRLNDDAAAEGKLDLIVEKIIAEFERLACVNFEDHRNLKKDLLLHLQP
                     AYYRLKFQIEWINPLRTDIKQSYSDVYEITKKSLEPLEDLLGETIPEDEIAYVTILFG
                     GYLSRKNNTLVERKKLLIVCSKGVGTSRMIERQLSQLLGERVEILEPISIREFEKGLY
                     APDFIVSTLPIMEPKAPVFIVSPILTEAQKQQLMKAIAPHILQKDSDARMLSSVLDVV
                     DQYAKVEDREKLAAKLKSVLFQVQSDSQLEKSPTLEELLPKERITFKESVADWREAIL
                     VASKSLQQEGYISRNYQHAMIENIEKLGPYIVIAPGIALPHASVDDGAYRVGMSLLRL
                     NQPVSFSSKAKDQVKLIIVLASIDSYTHINALSQLTNLIMKHHLLEQIEQATSAAEIA
                     AMLTIQ"
     gene            71307..71741
                     /locus_tag="U0290_000152"
     CDS             71307..71741
                     /locus_tag="U0290_000152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2300221.1"
                     /translation="MSFLDKELVNLHGSAKNADEAIVQAGELLVNAGYVSEQYVEKMV
                     ESYHENGAYFVIAPQIAIPHARPTDGVENSAVSLVVLKEGVNFGHAANDPVRLVFGLA
                     ATSSEAHLKVIQKIVSLLSNNDNIEKLIHSEDYQAIGELVEG"
     gene            71744..72016
                     /locus_tag="U0290_000153"
     CDS             71744..72016
                     /locus_tag="U0290_000153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2300222.1"
                     /translation="MKILAVCGLGQGTSLILRMNVETVLRDMGVDADVEHIDVSAARS
                     MNVDIIVTSQELAETLGTDTSAKVVIVNNYFDNAEIKTALSEAINS"
     gene            72043..73341
                     /locus_tag="U0290_000154"
     CDS             72043..73341
                     /locus_tag="U0290_000154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS ascorbate transporter subunit IIC"
                     /protein_id="HEM2300223.1"
                     /translation="MEIITWIANNFFGTPAILLGFIVLLGLLLQKKNLSQVISGTFKA
                     IIGFLIINAGAAVITGSLGIFEPMWKEVFGLETPPLAGFLGQEAFNAKFGSAVTLAMT
                     LGFLVNVLLARFTPFKYIYLTGHMMFWTTTIFAGITVQAVGGDIPFWGLVLFLAVIMG
                     LYWTLQPAITQPFLRKITGNDNVALGHTSSSVAILSALLGKVFGNKKNDAEHINLPKK
                     LEFLRDSNVITALTMGILFVVGAVILMVKKTPGAEKLIAEAGNQSFIVYSIVQSFTFA
                     AGIAIVLVGVRMFIGEIVPAFNGIATKLVPGAKPALDAPIVYPYAPNSVIIGFVGAFI
                     GAIIWLVVLGNTVGYVFVPTMIVLFFHGAVAGVFGNSTGGVRGALIGGFLTATVVAWG
                     QYIMVTFFINTTVPDTAMWAADSDMFILGPIVSMLAKLFF"
     gene            73411..74403
                     /locus_tag="U0290_000155"
     CDS             73411..74403
                     /locus_tag="U0290_000155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotriesterase"
                     /protein_id="HEM2300224.1"
                     /translation="MSFIRTFYGDIAPEQLGFTYSHEHIVCVPAYWQERDADDLLLDD
                     KEKSQLDVQDFADLGGKTIVDATAVDYGRRVLDVAQISKETGIQIVGTAGFNKSFLWD
                     GKIKPELKPIIGDFETYYEWIENTTTDKLTEFVVNEVENGLEGTPYKAGQVKFGTGYN
                     MITPLEEKTIRAVARAHHETKAPIHSHTEAGTMALEQIEILKQENIPLEYLSIGHMDR
                     NLDPYYHKQVAKTGAFMSFDGIAKIKYAPESARIAAILYLVSEGFEDQILVSGDTARK
                     TYYKHYGHGPGLEYIAKKWVPRFIDEANEKGFDGEKLVKKFFVDNPARCFTFKK"
     gene            74416..75165
                     /locus_tag="U0290_000156"
     CDS             74416..75165
                     /locus_tag="U0290_000156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="creatininase family protein"
                     /protein_id="HEM2300225.1"
                     /translation="MLYADENSFDIGAKITKTKPVLLPIGAVEAHGPHLPLGTDNILA
                     SEYSAKIAAETSGFVLPVLPYGQVWSLQDFPGSLTLSNETVTKVVVEIGESLYKQGFR
                     LFVPVSGHLGNMAALKDAARELYAKYPDMVILHIFYPNIQKLAMDVREGNANHHTYIH
                     ACEIETSLMLYLSPENADMSRAIDDPPILPIDADFTPTPWQNFTKTAVLGEATLATAE
                     KGEYLIEKTLKTCVELIKLEQEKIRKSTEME"
     gene            75125..75844
                     /locus_tag="U0290_000157"
     CDS             75125..75844
                     /locus_tag="U0290_000157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxo-acid lyase"
                     /protein_id="HEM2300226.1"
                     /translation="MNKKKFENLPKWNNFALFNFLAKDKENSLEVMEAARGFAVPGIV
                     ATNYETAEEAANVVKELQTTAPVISVGLGGGGDWQNWRDVLHIARLAPNSHINQPIET
                     AGLTNDLLPETYTNALVRPTGKIGIVKLSSGDEITAEEAVDYCLSANIPSIKFMSIEG
                     TKYLDELVYLTKIAADKGIYGIEPAGGIGADNILEITTAIKSTGIPFYMPHIFGKTID
                     KATGRTKPEEIEKIFAALEGN"
     gene            75845..76588
                     /locus_tag="U0290_000158"
     CDS             75845..76588
                     /locus_tag="U0290_000158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar isomerase domain-containing protein"
                     /protein_id="HEM2300227.1"
                     /translation="MINNYIDITVRLLENILDNEADYVKEAGAKVAESIENDGVIHLF
                     GCGHSHILTEEVFYRAGGLAAIHPILHEPLMLHEGAAASSVLERKNDYAKTFMAEEDI
                     RPGDIMIVLSTSGRNPVPIDVAEIAREKGAFVIVITSLQYSASQKSRHTSGKRLSDTG
                     DIVIDNGAVKGDAVLKSANFDIAFAPTSTVTGAVILQSIFAEAIETMVNDNFTPPVFI
                     SGNVENADAHNQALVDKYNERIPLLGMNL"
BASE COUNT        23352 a        13819 c        17011 g        22598 t
ORIGIN      
        1 ctaaataaat ttgtcgcaaa ataggataaa atatactcca gatagaactc attataaagt
       61 gaaaatcttt cttaactagt tcctaaatct gtgaaaaata aggattacat attattttat
      121 tatgctttgt gaattacaga gcaactgaac gcgtcacttt gggcggtttt tcacatgatt
      181 tttaagaggg aagcacaaat cagggaacga agcagtaatt tttagcacaa aaaggaggag
      241 aaaagggtgg ataaactatt tttagcccgt tttcaattcg catcaacaac gattttccat
      301 ttcttatttg taccactttc aattggactt gtatttatgg ttgctcttat ggaaacgttg
      361 tatgtcgtga aggggaaaga aatttacaaa aaaatgtcga agttttgggg acacatattc
      421 cttattaact tcgcagtcgg tgtcgtaacc ggtattattc aagaattcca gtttgggatg
      481 aactggtcgg attactctag atttgttggg gacgtattcg gagcaccact tgcaatcgaa
      541 gcgttacttg cattctttat ggaatctacg tttatcggac tttggatttt tggttgggac
      601 aaacttggca aaaaacttca tttagcatgt atttggcttg tttcaatcgg aacaattatg
      661 tctagtttct ggattttagc agcgaactca tttatgcaac atccggttgg ttttgaattt
      721 aagaacggac gcgcagaaat gaatgacttc ttgcaactta ttactaatgg acaactactt
      781 gtggagttcc cgcacgttat attcggggca tttgccactg gggccttttt cattgctggt
      841 gtcagtgcgt ataagatgct caaaaaacaa gatgtcgcct tctttaaacg atcattccaa
      901 attgcaatgg tcatggcggt aatcggtggc tttggtgtgg ctttcagtgg tcactcacaa
      961 gcacaatact tggttaaaac acaaccaatg aaaatggcag caacggaagg gatatgggaa
     1021 gatacagctg acccagctcc gtggacgatg attgccaaga tcaacccaga agagaagaaa
     1081 aacgaatggg aagtcaatgt cccgtacgcg ctaagtttct tatcttacgg aacattaact
     1141 ggtagcgtgg aaggtatgaa cacgctgcaa aaacaatacg aagaaaaata tggtgaaggt
     1201 gactacatcc caccagttaa aacagcattt tggagcttcc gtatcatggt tggcgctggt
     1261 atgttaatga ttttattcgc attaatcggt atcgtgcttg cttggaagaa aaaactcgtt
     1321 aatgcaaaat ggtatttacg tttcatgatt ccaatgattg gcttcccgtt cctagcgaac
     1381 tccatgggtt ggattatgac agaaataggg cgacaaccat gggtagtttt cggttacatg
     1441 aaaaccgctg atgccgtatc gccaaacgtt tcatcaggac aaattttgtt ctcgataatt
     1501 gcgttctcga caatttatac gattttagcc attctattgg tttacttgtt tatacgtgaa
     1561 attaaaaaag gaccagacgg acacaaacca gaaaaagcag agatttccgt agatccgttt
     1621 gataaggggg atgaaagctt tgtcactaaa tgagttatgg tttctattaa tcgccatctt
     1681 attcattgga ttcttcttcc ttgaaggttt tgactttggt gttgggatgt ctacacgatt
     1741 tatggctaga aatgcactgg aacgccgcgt gctcgttaat acgattgggc cgttctggga
     1801 tgcaaatgaa gtttggttac taactgcagg gggcgcgatt ttcgccgctt tccctaactg
     1861 gtatgcaacc atgtttagtg gttattatat tccgctagta ttcttattac ttgcgctaat
     1921 tggccgtggt gtttcttttg aattccgtgg tcaaaaagat tcaccgcttt ggataaaaac
     1981 atgggattgg gttattttct tcggtagtat tttaccgcca ttcctatttg gtgtattatt
     2041 tgctagcttg attcaaggta tgccgattaa tagtgatatg gatatgtacg ctgggttctt
     2101 tgattacatt accgtattct ccgtatgggg tggcgtgacg attacgctca tgtgcctact
     2161 tcacggatta ctatttatta ctttacgtac agaagaggat attcaagacc gtgctcgtcg
     2221 tatggcgaaa cgtgtttggt ttattactgt accagctcta gtaattttcg ttgtacttgc
     2281 ttacttcaat actgacatgt tccaagttag acctgtactt gtaccactga tgattggaat
     2341 tgtagtcgtt atgtacgtgc tatctgccct gtttatttgg aaagatcgtg atattttggc
     2401 atttacattc ggcggacttg gaattgtctt cacgattgcg acgattttcg tgtcactatt
     2461 cccacgtgta atgatcagtt ctatcaacag tgcgtttgat ttaactatag aaaatgcagc
     2521 ttccggacaa tattcgctta gtgtgatgac gatagttgcc gttacgctac tgccgtttgt
     2581 tcttggttac caaatttgga gctactatgt tttccgtaag cgcgtttcta gtaaggagaa
     2641 aatgacgtat taatgggaaa agatttaagg aactacaaag gaattaaaaa aataatggcg
     2701 attctcgcag ttttcacgct agttcaaggt gctgcgatta tcgtgatggc gataacttta
     2761 gctcgtgcga ttactgactt atttcacgag cacgcgtttc aatcagtcac aatacaaata
     2821 ggtctcttcg cgggggccta tttcttgcgt cactttttga acgtatggaa aaaacaaatc
     2881 gtttaccgtt acgctgcaaa acttgcgaaa acaatgcggg aagagttgct tgatagtttg
     2941 tttgcgcttg gaccgcgttt tgctcgagcg gaaggaactg ggaaagttgt cacgatggtt
     3001 atggaaggtg tagcagattt ccgaaattac ttggaactgt tcttacctaa aatgatgaat
     3061 atggcaatta ttccagcaat gatttgggtg tatattgctt ttcaagactg gacctctgct
     3121 tttattttga tgattacttt gccgatttta attgtattta tgattattct aggattagct
     3181 gcaaaaaaac aagcagattc tcaatttgaa acgtatcgcg tgctctctaa ccactttgta
     3241 gattcgttga agggtttgga aacgttgcgg tatttggggc ttagtcacga ccatgaaggg
     3301 aaaattgctt cggttagttc gcgttatcgt aaagctacga tgaaaacgtt gcgtgtggca
     3361 tttatgtcgt cattcgcgct agatttcttt acgatgttat cgattgcgct cgttgcgctg
     3421 ttcctaggtc ttggtctcat tgacggtaac atgaatttgc caattgcgct tagtgtccta
     3481 atccttgcgc cagaatactt tttaccagtt cgtgaagttg gctcggatta tcatgctaca
     3541 cttgatggtc aagaggctgg tcgcgttatt caaggaatta ttgaccaagc caaagcagaa
     3601 aaaccggaaa cgaatgcact acctttaaca acttttgctg aaaatacgga gttttcgttt
     3661 gaaaatatta ctgtaaagca tgatgtagat gctgctgatt cgcttcatga agccagtttt
     3721 acggtaaaag gatttgaaaa agttgggatt attggtgcga cgggcgctgg gaaatctacc
     3781 ttgattgatg ttttgagtgg ctttttgacc ccgacttctg gaggttttcg ttggaatggg
     3841 gaaagtggtg cgtcgcttgc ttcgagtgat tggcaaaccc aagtcactta tattccgcaa
     3901 catccatacc ttttccacga tacaattgct ggaaatattc gcttttatca tcctaactct
     3961 acagatgagg aaatgaaaaa agcagcagaa tctgccggtt taaataagct tgtagcggga
     4021 ctggaagatg gttatgaaac gcttgtcgga gaagctgggc ggatgctgag tggtgggcaa
     4081 gaacagcgtg tcgcactggc tcgtgcattc ttaacggatc gtccaattgt gttaatggat
     4141 gagccaacag cccacttaga tattgaaacg gaatatgagt taaaaaaacc aatgctagac
     4201 ttatttgaaa atcgacttgt ctttttcgcg acgcatcgtt tgcactggat gctcgaaatg
     4261 gaccgaatta ttgttttaga tcacggggct gtcgttgaaa ctggaacgca cgaagaatta
     4321 ctttcgcgta aaggtttcta ttacaattta gtcaaagccc aattggagga agtatgatgc
     4381 ggaaaagtag ctggattatc ccatatatta aagaaaaccg cggcttgttt ttacttgtca
     4441 tcttccttgg aacactaact tttgcctctg ctggagcact tatgtttacg tctggacatt
     4501 taatttcgaa atcgtccttg atgccggaat ccatcatggc ggtttatatt tcgacagttg
     4561 gtgttcgtgc atttggtatt atgcgctccg tttcacgcta tgtggaacgc ctttcgagcc
     4621 attcgcttgt ccttcgaatt ctggaaaaga tgcgtgttcg cttgtatcgt ttacttgagc
     4681 cgcaagcgtt actactaaaa tcacgttata aaactggcga tattctgggc ctcctcgcag
     4741 gtgacattga gcatttacaa aatttctatt taactacaat gctaccggca attgttagcc
     4801 tcgtgcttta cgcgggcgtc gttatcgcgc ttggagcatt ctcgattcca tttgctgcgc
     4861 tctttgtact cttgattggc ctccttgtgc tcgttcttcc atgggtatca cttttatatg
     4921 ctcgtggaaa gaatgcttat ctaaaacaag ggcgcaatag tttatatcaa aaatttaccg
     4981 atgcagtgtt tggtattagt gattggaaat tcagtggacg tgaaaaaaca tttatttcta
     5041 actacgaaaa agacgaggca gacatgcttc gaacagaaaa taaacagttt cattttgtta
     5101 attggcgcga tttctttagt cagttagttg ttggctttat ggttatcgtg atggtttatt
     5161 ggagtacagc agaatcacgt gatggagcat tttctggaac gatgattgcc gcttttgttt
     5221 tggcaattat ggcgctagca gaagcgtttg taccagtttc aagtgctatc agtgacaaat
     5281 cattatacca agactcgctt gctcgtttag acaaaataga agatccgacg ctaccaactt
     5341 ttgaagaaga aacgaaagaa atagagcgaa tcaacacaga aaatgttgtt ttaaaagcag
     5401 aaaatctaac tttcgcgtac gatgaaaagt caccagaaat cttaaatggt tttgacttca
     5461 cattgcaaca aggtgaaaaa gtggcgatta tcggtcgaag tggaacaggg aaatcaactt
     5521 ttcttaaatt agttcaagga gctttactgc caacagctgg aaaagtaact atgaacggag
     5581 ttgaagtgga gaatttaaga ccgcaaattc ctgaaatcac atcaatgtta aatcagaaag
     5641 cgcacctttt cagtacgacc gtcttaaaca acatccgcct tggaaatcaa gatgcatcgg
     5701 acgaagaagt atacgaagcg gcgaaaaaag ttcagttgca cgattttata atgagcatgc
     5761 cagatggcta tcatacacaa atgagtgaaa tgggtgaacg tttttcaggt ggtgagcgtg
     5821 gtcgtatcgc tctcgctcgg attctactac aaaacacacc aatcgttatt ttagacgaac
     5881 caacagttgg tctggaccca attacagaac gcgatttact agcgactatc tttgaaacgt
     5941 tagcagataa gtcactcata tgggtaacgc atcatttagt tggtgccgaa aaaatggacc
     6001 gcgtcttgtt tttagaagag ggaaaaacgt taatggaagg acctcatgct gaattaatgg
     6061 cagaagaacc acgctataaa cgactttatc aactagatcg cccgattgaa ttataaaatt
     6121 aagccttgct aagtacaatc ttagcaaggt ttttttgtat cgcagtttta atatttgtaa
     6181 caatattgta atttaaaatt gactttcatc acatttctgc ttattattaa actaagcaaa
     6241 atgaaagggg aatttattat gaaaaaattc cacgggctag tgcttactgc gttagtaact
     6301 tgtctaatca ttccattctc attggcagca agcgctgaaa caaatgaaaa tggtaacaat
     6361 tcaacaccta cagaagaaaa aacaacagat actactgaaa acataattac tgaagaaaag
     6421 ccagaaccag cagtaccgac aaaagacacg actgtaacaa catcgcaaaa aagcaaagtt
     6481 caaacaacga tagatattac cgattctcaa gaagtttact cgtatgaaca aaatagtaag
     6541 attgatctca aagatttcac cgcaacatta actgattaca ccgatacaaa actaaccaat
     6601 tatcgcttag cagccaattc taaactaagt actgcacaaa caggtatcca agaagtcacg
     6661 ctccttggag atagtgaaga cggcaaaaca acagcagtca aactcaatta cttagtcaaa
     6721 gaaaaaacgg cccaactgac tattacagat atgaattttg atttagaaac aaaaattttc
     6781 acaggtaaaa caaaaccatt cgctagtgta tatatgagtt ctccggcaga tgaaaacttt
     6841 ggagaaggaa caacaactgc ggataaagat ggttattttt atgcagaatg ggcgacaaca
     6901 ccaaaacaaa ttacggcata tgcttttgat gaatcgggta attatagtga agaagtaacc
     6961 tatcaagtcc cagcgaaaaa acaaaatgaa gcagtcgtaa cagctccaga taaagtgaag
     7021 aaaatcgaaa caaagaacgc ggtcaaaagc gcaacagcaa aacctgctga tgttgcaaaa
     7081 gttacaaaag atgacaaaac agatttgcca agcacaggtg acaaaggtac agaatggatt
     7141 ttcgtggtag cgggtgttat agttattctt gtggcagtgt tattacttag gaaacgtaaa
     7201 aaataaacta attgctatag ggaataactc aaaaataagg agcgaataat gaagaagtta
     7261 ttaagcggtt taattattgt tttaatggtt agcctacttg gtcactcctt taatgccgaa
     7321 gcagcatcct acgaaaaaat catttatgac aaagcagtta atctaaaagg ggtagtaaat
     7381 cagtcaaaac gaaatgatgg tattaatagc aagatgtaca aaacgagtag tagtgttaag
     7441 tacctcggtt cagctaagaa atatgacaag aagacgttga ttattacgcg cgaaggaaaa
     7501 acagcaagag ctaaatggta ttattgtaag ctaggaaata ctacaatcgg atggattgac
     7561 tcgcgtgcct ttacgaatgt cggcaaacca acaattgctg acaccgttcc agctctttgg
     7621 aacagtaaaa aggcaatcat caccacaaaa ccaaagaata ctaccgcaac aacctacttt
     7681 ttccaaaaaa atagtgcagg aaattggtat gaagttcgtc attttaccag tcatattggc
     7741 aaatggggat ttgatccaaa gttctctgaa aaaagttctg gaactccagt tggcgtttat
     7801 cgtacaggca ttgcatttgg gcaaaagggt aatcctggta cgaagctgac attcagagcg
     7861 attactaata gaagttattg gatttctaac tctaacgaca aatcctataa cacttggcaa
     7921 gaacgcaatt cctctagttc tgcagatgaa aaaatgaaga ttccgcagta caaatacgga
     7981 atggaagtga aatacaacgc taaacgtgta aaaggtaagg gatcggctgt gttttaccat
     8041 gttgattcac caaaatacaa ttacacatta ggttgcgtcg ctcaaagtga agccaataca
     8101 aaagaagtgc taaaattcgc ggataaaaat acacttattg tgttaggtga agaaagccga
     8161 ataaaaactt tttacggtat aaattaagct agagaatttc tctagctttt ttgtttggca
     8221 aaaaagctaa gtagcctagc cccaaatttt cttctatttg acgtataata aaaagaaacg
     8281 aaaacgcggg gtgaattgtt tgacgagtaa accatacata atgggcgtag acattggaac
     8341 ttcaagcaca aaggcagtac tttttaatca acgaggagaa gtgattttcc ggcaggcgac
     8401 gcattatgaa ctaataacgg atgaaactgg gaaagcggaa gagagcccca cggaaatttt
     8461 cgaagcagtt ttatcatcta ttcaagctgt gatgaaaaat gtgaataaag aagaattagc
     8521 ggggatttcg tttagttctg cgatgcatag tttaattatg gttggaagta atggagagct
     8581 tttgactgaa tgtatcactt gggcggacgg acgaagcagt gagacgcttg aaaaagtaaa
     8641 aagggataat tacttattcc aactgtatga ggccacagga acgccgatac accctatgag
     8701 cccctttgcc aaaatttgct ggttgaagga ggaaaagcct actttattta aacgcacaga
     8761 aaaatttgtt gatattaaat cctatatttt ataccgatta tttggtgttt gggtgatgga
     8821 tgaatcgtta gcatcgggga ctggactata taacattatg gagcacgact gggaatttga
     8881 agcaatggaa attgtcaaat tgactcctga tctcttgcca aaagttgtac cagaaacata
     8941 tcaattaact ggtgtgaaaa aagaatacgc tgaattaatg ggaatcccag aaaatttacc
     9001 attcattgta ggggggagtg acggggcgct agctaatatt ggtattcaag cgaccggcca
     9061 aaatgatgtt acgattacag taggcacaag tggtgcagtt cgcaaactta ccaatcaatt
     9121 ccaaatagat tctcgtggtc ggacgttttg ttatggagct ggtgatggat actttatcgc
     9181 aggcggcgca gtgaataatg gtggaaaagt agtcgagtgg ggtttgcaac aatttggctc
     9241 tgaagctgaa attagtaggc gtgatttcgc aagctttatt gcaaaaatag aggaagttcc
     9301 tccgggcgct gcgggtcttt tattccagcc atatttgtta ggcgagcgtg caccattttg
     9361 gactaatgat attcgaggag gttttgttgg gctgacgatt aatcatacaa aagcccattt
     9421 tattcgtgcg attttggaag gtgttgcttt taatcttgca gaagtttatg aggcggtttc
     9481 ggctccagat gacattattt acgtcacagg tgggatttct gcgcatgatg gttggtgtag
     9541 acttctagcg gatattttga accgtgagat acgtgttccg catacgatag aaggctcgag
     9601 tttaggagca gcaattattg gtatgcgctc actcggaatt ttgaaagatt tgaatctaaa
     9661 acatacgctg cctattaaag cggtatatca tccaagtgag aacgtcctta aatacgcgga
     9721 attacgtctg atttttaaac aagtaaccac acagttaatg tcgagctaca gccaattaaa
     9781 tagttggcaa aagaagtttg atattaacag ctaaattttg gatttcatga tataatcact
     9841 aaaagaaaag tgataacgag ggggagaaac catgaataaa aaaatagtat ggatagcttt
     9901 aacattagta ggtatttgtg tagttggtac gattatcgca gcaatcatga gtgtttactt
     9961 acgttaaaaa atatttccgt gttcccgctt gcacttttta cacgaaaaag gtacactagt
    10021 aattgagctc ttttcagagt ttgcgctaaa taatttttat ttggcattta attattggta
    10081 gcaaatttgt cgtgctagac ggggaggtag cggcgccctg taacccgcaa tccgctctag
    10141 cggggttgaa ttcctcattt gaggcatcgt aattgtttgg tctgcccttg acaagtggtg
    10201 ttgaaggttg ggtcttgcgc aatgggaacc tgtgaaccat gtcaggtccg gaaggaagca
    10261 gcattaagca gtgcttctca tgtgccgcga ggtcgcctgg cccgagctaa ctatcagggt
    10321 aacgcagatg attgcatgtc gatgtgaggt gcgcgacact aattttaaat atataaaaga
    10381 ctattttgct tagcgcagag tagtcttttt tctacaaatc agccctatcc tcagaaaaat
    10441 aatgtataat gattcataaa ctggtacaat ataaaatagt aaagcaattc atgacaaagg
    10501 atgaaaataa tgcaacaact aaaatcaaaa aagaaatggc tgcccgctct aatcgtcgca
    10561 gttttcgtag gaattatcgt aatcttagca attatgtttg gcttttttca gcgccaagaa
    10621 gtgtttgata agtatgaagt agcttacgaa atagacggca aattatatga agtcttccca
    10681 attagtgcga cagatattgg cgtagataaa aaatccaaag ataaaaatct ctatttccgc
    10741 gtgaatagtt actacaatat tgattactta ttccgactag cttataaaca atatgaaatt
    10801 aatgaaccat ctaccaataa atattacgca ggtttgattg actacagcgt ggccgataat
    10861 gcttatgtta cacaaaaaga tgtgtatatc acaaacaatg aatcctatgc aacatatgac
    10921 ttttttgata agaatggtaa gaaaatctat acttataatc ctgaagaaac atcaaatgat
    10981 gattacattg tgcgtatcaa gccgacaatt ctacaaggat acgaaaaaag tgatatcggt
    11041 agctatgatg actatctaaa tattacggca ctttttaaag ataaattagg catggacgta
    11101 aatgtccgaa ttgatgagga taaagaaatg gttatcttct ctattaaata aaaaagagca
    11161 tccccgcgga tgctcttttt tattaattat catctgtttt cttttcaaca tcttgctttt
    11221 tttgttcact cgcatttttt ggttctttta tatcatcagg aaacacaatc gaaaaatgct
    11281 cttttttcac aactttacta tttttcgact cttccggcat atctcgtttg actgccatat
    11341 ttatcacctc gaattgttgg tattacttag cttatgctca ttataacaca gaaagaagaa
    11401 tggataaatt agtaaactgt gtaatgttaa cgcttactta cacagttttt ttctgtatgt
    11461 gtgtaataca agtttaaagg caagaaagac aaggctttca agagattaaa ggatgttttt
    11521 tccaaattta gtacttggca cggaaattgc aatagattaa ggtgaatcta aatgtaagcc
    11581 ttatcatgaa gcggagagga gggctcccaa aatttcacga ggtcatgcaa agattccatc
    11641 tggtttgttt tagtaatggg gattactagg acaaagtaaa cagatatagc tgataaactt
    11701 aaagggagtt tatacataga aattatattt tgtttaaaag atgagtgtta aataaaaagg
    11761 tttacgggag gataaaatat gaatggatta acagcatttt tggaaaagta ttttgtgcca
    11821 gtagcagcga aaattggttc acaaaaacat ctagttgcat tacgtgatgc ttttatttca
    11881 acaatgccaa tcactatggc tgggtcaatt gcagtacttt taaatgcgtt ttttagggat
    11941 tttccaactg actggggatg gacaggattt gtggaagcaa tgcaaccact tatcgggatt
    12001 aatggatatg tatacaatgg gacattagca attgtttcaa ttatttttgc cttttcacta
    12061 gggtataatt tatcaaaagc atatgaagtg gatcgattag ctggggggct agtttctctt
    12121 gctgcttttg ttatgaactt aactgttact gtaagcttag atgcagtaaa agctgcgatt
    12181 gcggcttcta atgcaaattt cgatgtagct actttaccaa aagaatttgc tggaatttac
    12241 ggattcttta gcctaagcca agtaaatggt accggcttgt ttaccgcaat gattttcggt
    12301 tttatatcaa ctattattta tgcgaaatta atgcgcagaa atattattat caaaatgcca
    12361 gattctgttc caccggctgt aagtaaagct ttcgcggcga ttattcctgc gttagttgca
    12421 ctttatgttg ttggtattat tgactgggca ttcttcaaaa tcacaaatat ggacgttatt
    12481 acttggattt ccaaaacaat tcaagagccg ttattatcac tttcgcaagg gtacggagct
    12541 gttttactag ttactttctt agtacaacta ctatggttct tcgggattca tggtccgaac
    12601 gtacttgctc cggttctaga atcactttgg ggtacagcac aactacaaaa cattagtgcg
    12661 gcacaagaag gcgctaaatt accattcgaa tgggtacgtg gttctttcga tgcgtatgta
    12721 tggatgggtg gatcaggcgg tacgctagta ctgattatcg cattactaat gttctcgaaa
    12781 cgagcggatg cacgaacagt tgcgaaattg tctcttgcac caggtatatt taatattaac
    12841 gaaccaatca tgtttggttt accgatcgta ttaaatacaa tttacttaat accattcctt
    12901 atcgcgccaa tggtaatggt aacaatcgct tactttgcaa caacacttgg cattgtcggc
    12961 ccagttaaaa ttgcagtagt ttgggtaatg ccgccacttc tgaattcctt cttagcaacc
    13021 gggggagatt ggatggcacc agtaatttca ctcataaata tggtcgtcgc gttcttgatt
    13081 tgggtaccat ttgttattac cgcaaatcgc gttggtgtac cagaagaaga gatgaaagct
    13141 tagaaaataa taagtttctg gctaggtgca gctaaattgt gcctagccag tatatcatgt
    13201 aggaattcct gcaccatttt tattcattgc aagaagcgaa agataacgtt aaactataga
    13261 aaaggaggtt tttttaaatg attattctta attgtccaat gaagcgagat tacattactg
    13321 aattacttga aacatatgat aaagacggtg taacttttaa aaaaatagac gaaaaaggta
    13381 tgaaacttac ttttgaaaca aatattgaag acgaagaaaa ggcagcaaaa atcgccaaag
    13441 aaacaataaa agcaactgaa ataggctctg tactctattt ccaagttagt gtgggttgaa
    13501 aatgaaaatt gttaatgcac tatttcttat tagtataggt cttattatta ttatgtttag
    13561 tccttcttat ggaaaagatg ggatggctag tgtacctctt ctagttacag gacttgcggt
    13621 tgttttaatc ggctgtgttt tcatcgtgct aaaaatccgt aaagataaga aagaaaagaa
    13681 ttagaaggag tcgattaaaa agtgaatgtc acacagaaat tatatatatc ccaaaaagaa
    13741 tgctttgata cactagttag ctcagcaatc tatgatgtaa aaaatgccac tggtaagacg
    13801 cttcaagtac gaaagttaga aggatataaa tatcaacgta cgatgtctaa tggcgcactt
    13861 gctacaacaa aaattgttaa agtgcaacct aacgaacttt atcaattcga aacgagcagc
    13921 cgtgtgaaca ctcatacgac gacgtatacg ataaaatcca ctagcgaaac tacatgcgaa
    13981 gtgacctata acgaattaat cgaaacggaa aaagcgttaa ataaaatgaa taatattatt
    14041 gttggtttta tgtttggctt cttccgtaaa aaacgtgtaa aaaacttgct gaaatcgatt
    14101 gagctttcgg ttattaatga gagtaagcag aagcaggaga aattggctgc taaaagtgaa
    14161 cagtaagagt ttggaatcgg gctttttcgg gggtctggtt ctttttttgg ggtttgattt
    14221 ttgatttttg gtggtggtgg tttttgaagc tagcccggct caggacgttt tgaaacttct
    14281 ggtaaggatt aaatcatcgc tttgctcaga tttatattga agaagtagat caaaacaaac
    14341 aacgttttga aacttcttca acaatacgtt ataataaaac tactaaaatg gttttaggtg
    14401 aaggagagtg gcagatggcg tatcaggctt tgtatcggat ttttcggccg cagtcgtttc
    14461 aggatgttgt tggacaggaa catgtgacga aaacgcttaa aaatgccatt gtgcaaaata
    14521 aaacttcgca cgcttattta ttttctgggc ctcgggggac ggggaagact agtgcggcga
    14581 aaatttttgc gaaggcgatt aactgtgaac acggccatga cggggagcct tgcaatgaat
    14641 gtgagatttg taaaggtacg acggacggtt ctataccaga tgttcttgaa atcgatgctg
    14701 ccagtaataa cggggttgaa gaaattcgag atatccggga aaaagtaaaa tatgcgccaa
    14761 ctgtggcgaa atataaagta tatattatcg atgaagtgca tatgttgtcg acgggagcgt
    14821 ttaatgcgct actaaaaacg ctggaagaac cgccgaaaca tgtcattttt attttggcaa
    14881 caacagaacc gcataagtta ccgctaacga ttatttcgcg ggtacaacgg tttgatttta
    14941 aacgaatcac gacacaagat attattggtc gtttgaaatt tattttggaa gaagaaaaaa
    15001 tcccttatga tgaaaaagcg ttgatgattg ttgcgcgtgc ggctgaaggt ggaatgcgtg
    15061 atgcgcttag tttgctcgat caagttatat cttacgggtc agaagaagtt gcagtggaag
    15121 acgcgctaga aataacaggt tcggttgctc aaaatctcct tacaaaacta gtaagtgcag
    15181 cgtttgacgg cgatgcagca gaagcgattt caacgctgac agcactgcta gcagaaggga
    15241 aagacccggt tcgcttagtg gaagatttac tcgtattctt tagagatgtg ctgctgtatc
    15301 aaaaagcgcc gaatctggaa gaaacactgg aacgagcttt gattgatgat gattttgttg
    15361 ctttggcaaa acgagcagat tcacttaaag tgtatgagtt cgtgaaaatt ttaaatacag
    15421 ctcagcaaca aatgcgtttc tcgaatcatc cgggtattta tgtggaagtg gcgcttgttc
    15481 agttaactca ggcgggtaaa tcagttgcag gtggcgggaa tgtgccagca gatgcagctt
    15541 ctggaagtga tgtctctgac ttaaaacgtc aaatggagca aatgcatcaa gagatacaaa
    15601 cgctgaaaaa acaaattgcc agcggggctg gagcagcgcc agccgataaa ccaacccaaa
    15661 atcgcggtgg ttctaaaaaa gcaatcaaca acggcaagca atttaaagcg cctattggta
    15721 aaatcaacca tgtgctaggt gaggctaaga aagagaattt acagttaatc cgtggttgtt
    15781 ggggcgagtt attatcaatg ttgatggcat ctcaagcagc acttttaaat gacgcagaac
    15841 ctgtggctgc atctcaggac acttttgtgt taaaatttaa gcatgagatt cactgtcaaa
    15901 tggcgatgga taatccgaac tttgttgaaa ccatcacatc gagtattgcc cgactgactc
    15961 aagtaaatta tacttttatt ggtatcccag aagatcaatg ggctgacgta agagagaatt
    16021 tcctgcatag tcatggtagc gacggcgatg cggaggacgg cgcaaatcca gaagctaaaa
    16081 aaccagcgga agatcctttt gttgcagaag ccgcaaaact cgttggtgaa gatttgcttg
    16141 aaattaaaga ttaaaaaaca atagaagaaa gaggagatta ttcatgcgtg gaatgggaaa
    16201 tatgcaaggt atgatgaaac aaatgcaaaa aatgcaaaag gaaatggcga aagctcaagc
    16261 tgatttagaa gctcaagagt tcactggaac tgctggtggt ggaatggtta cagtaaaagc
    16321 tactggtaaa cgcgtcatta cagatgttgt tataaatgaa gaagtagttg atccggaaga
    16381 tatcgaaatg ctacaagatt tagtacttgc agcaacaaat gatgtattaa aacaaattga
    16441 agatacaact tcacaaacaa tgggtaaatt cacacaagga ttaaatattc ctggaatgta
    16501 atattgtttg gtttgagact cttggcttat ttacaagagt ctcaactatt tttcaataga
    16561 atgttccacg tgaaacattt gtattttgaa ggtgagagga agacgaatta tgcattatcc
    16621 tgagccgata acgaaattaa tagatagttt tatgaaatta ccaggaattg gaccaaaatc
    16681 ggcagctcga ctagcttttt atgtgttaga tatgaaagaa gacgatgtgc tagattttgc
    16741 aaaagccctt gttgatgcga agcgaaacct aagcttttgt tccgtttgtg gtcacattac
    16801 agataaggat ccatgttata tttgcgctga tacgtcacgc gatcgaagtg ttatctgtgt
    16861 agtacaagaa tccaaagatg tcattgcaat ggaaaaaatg cgtgattttc atggcttata
    16921 ccatgtactt catggaacaa tttcgccaat ggatggaatt ggaccagaag atattaacat
    16981 tcctgatttg ctgaaacgtt tgcaagatga cacgattgaa gaagttattt tagcaaccaa
    17041 ccctaatgtt gaaggagaag ccacggcgat gtatatttcg cgcttattaa aaccttcagg
    17101 cataaaagta actagaatag cgcatggcct tccagttggc ggagacttgg aatatgcgga
    17161 tgaagtgacg ctctcaaaag caatggaagg acgaagagaa gtataatcag aggtgataaa
    17221 atggaatcca gaagcaataa gtttggtcgg aagaaaaaca agaagattgg taaactacac
    17281 aaatcctatg atgcttatct gatggaattg attgaagtca cgcaagaaaa gtggcacaaa
    17341 caaaaagttc taatgcgtaa aagttttgaa tatgatccta atttagaata tgaggaaaag
    17401 aaagcagaag ctcgctattt ttaccttttc aaagaagcac gtacaagaca attaaaaaac
    17461 aaataaaaaa atctactaag ccaaattggt ttagtagatt tttattttag gctaaatttc
    17521 tgatcttaca tacatcacgt ctggtgcgtg gctcacacgt tcaccagtat ttaaacgctc
    17581 gacttggcgc atatctgctt ctgataattc aaaatcataa atagctgcat tttctctaat
    17641 tcttgaaggt gtttctgatt ttggaatgat agagatatta ttttgtaagt gccatcgaag
    17701 gacgatttga gcaggtgatt tcccgtgttt ttccgctagg tcaataagga tttgctcttg
    17761 taaaacccca ccacggccaa gtgggctcca agcttggtga acgatatgta gctcttctaa
    17821 atagcggtgt aaaagatgat tcggaaagtg cggatgcgtt tcgagttgat ctactactgg
    17881 aagcacattg gcacttgtac gcaggcggtc cagatgatgc gcttcaaagt tacttacacc
    17941 aattgcgcga acaagtccct cgtcatataa tttttccaca gcgcgccaag tgtcaaaaaa
    18001 agtatcttgt tttggccaat ggactaaata taaatcaatt ttgtccaatt gtagtttttt
    18061 ctgcgatttt tcaaaagctc gaagcgtttc atcgtaacct tgttctgtat tccacatttt
    18121 tgttgtgacg aaaaattcat ctcttttcaa gccacttgac gcaaaaaagt ctccaagctc
    18181 tttttcatta tggtaaaatg aagccgtatc aaacaagcga tacccgacat ccaccgcggt
    18241 ttccagcgca gtacgcatac gcgcttcatc cgttagcttg tagaccccaa aaccatgtct
    18301 aggcatttca attccattgt tcagtctgta tgtatccgag aaagaaagtg tcatttcatt
    18361 tacctcctac tttagtttat taacttaagc ataccagaaa atggagaatt tctgtagaat
    18421 gaaggataga aatgcgattt ttttataaat tccaaaagga cgtgagtgaa tgagacaacc
    18481 ttttcaagtt ttagttatac cgtttattaa aacggaagca aattatcagt ttggtgtttt
    18541 acatagaacg gatgcagatg tttggcagtt tgtagctggt ggaggagaag atgaagaggc
    18601 tatttcagag actgctaaac gtgaaagtat agaagagttg aatttgggag tcaaggttaa
    18661 aatgtatagc ttggattcac atgcatccat ccctaatttt catttctcat ttaacaaacc
    18721 atatgttgtt ccagaatatt gttttgccat tgatttaacg agttgttcat atcaggttac
    18781 attatcttta gagcatagcg agttgcgctg ggtttcttat gagtctgcgg ttcagttatt
    18841 ggagtgggat agtaataaaa cggcgcttta tgaactaaat gaacggttga aaaacaatga
    18901 tatgaaggca atataaaaaa aggctgaatc tcagcctttt ttcttaactc gggattaaac
    18961 tgtttagcac gtgcgcaatg ccgtcttcat tattggataa tgtaacagag cttgctgcgg
    19021 cttttaattc agggacggca ttttgcatag cgattcctgt tcctgcatat tcgaccatgg
    19081 taatatcatt atgtccatct ccgaatgcga taacattttc agcgtgaatg cccatcggtg
    19141 ttaaaacggt atcaagtgct ttggctttat caatgccctg agctgtgaat tcaaagtaaa
    19201 aatcagctgt gaagacacaa ttaagtgtat ctttgaaagg ggccatcatt gcttgataat
    19261 tttcttgcat ataggccggg tcgccagctg tgagaatttt atttagacga taatctaaaa
    19321 atgcggctaa atcatctttt tcacagagtt tgaaattccc accgcgagat tcgtactgaa
    19381 caatatttat tacttcgccg cggtaaggta cgtagcagtc gtatacatca ttcgtgtaca
    19441 tataatcctc tttatcaatc attactttca cttcaaattg tttcatgtgt tctaaaacgg
    19501 cttttccttc ttcaacagta agtgcttggt tgaataattc ttcacttgtc gcgcaatcaa
    19561 ctactttagc gccattgtat gaaacgagca aaccgtgatg cttttccatt tctaattgtt
    19621 ccgcatatac gtgcattcct gtggttggtc taccagatgc gagaataagt ttaacaccat
    19681 tctgttgcgc ggtgatgagt gctttttttg tttctggtga gatttttttg tcgtcgttca
    19741 ataaagtgcc atcaatatct aaaataatcg cttgggttgt catgtaagtt tagctccttt
    19801 ttttctttat tgtatcacta gaaattaaga aaaaatcaga tgtggcgcat attgaaagct
    19861 ttttttcaat tcgaaaggaa aatggctgtg tttttgaaaa atcattccaa ttcggtgttc
    19921 attttttggt aattagtcgt tttgtattga atgttttttt cgtaattttg attaaaataa
    19981 atggaataaa gcgtatcgaa aatgcttagt aaagattggc gcgttgagaa cgaagagact
    20041 ttgttgtaat ggttctcagc ggatgccatg tagattttgt gtgtggcaaa ttcgactaaa
    20101 ggattgtctt gcatagatgt aattaaaata atatcgacat tgttttcgga caagattttg
    20161 acgactcttt gaagcgtccg actccgaccg ccgtaagaaa cgacgatggc aatatggttt
    20221 tcatcgctgt tggcggccga taagctttgg atataatctt cttcaggaac attgactaaa
    20281 acaccgattt cctgcatttg gaatttgaag ttttgagcaa aaaataaatt ggcggaagct
    20341 gcataaacat caatggtttt cgcttgaatt aatttttcac caattttgac aagttcttct
    20401 ggatcggcgt tgtttaatgt ttcatcaatg gttcctttgt atatttggtt taggttggtc
    20461 attatttggt agggtgtatc ggattccaaa ataggataat cgtaatttaa atctttttct
    20521 tcatttgttt cacggagact cgaggcaatt tcgattttta gttcaccgat tccgttcagc
    20581 cctagtttgt taattaaacg gtagatagtt gcagcggaga caaaggcagc ggtagctaat
    20641 tcttttggtt tgcactgtaa tgtttttttc gggttcgcta aaatataatt cgcaagttct
    20701 ttttcactat tggttaaatt ggttagttcg cgtattttaa ttaaaatatt catcgtttca
    20761 aatcctaact ttttagaatg ggaaattgtt ttaaataatt ataccattaa ataaaaaagt
    20821 ccctctagac aaagtgcatc taaagggatt tttttcagtt atttaatttc aattgtttta
    20881 agatttgctg cgatgacttc tggtttttca tccatttgaa cttgagcagc agtagcgtaa
    20941 gcaccttcta aaattggtgc attaaagaga ataatttctt tttcgctgat ttcttctact
    21001 gtttctatat tcattttggc gcttccgagg tcgtagaaag tgtagacttt attagcttcg
    21061 ttactttcaa tcgcttcatt tacggcatca aaacttgtgc caatgcgacc gtcttctgtt
    21121 ccaccggcat gcgtgataga gacgtctggg gcaatttctt taataatatc atggacgcct
    21181 tttgccacat ctttggaatg agaaatgata acaacgccat aaggtttagc catgggttag
    21241 ctcacctccg tttgaagcat tgcgtggaat aggagggcgg aagagtaggc accgggatca
    21301 agatgcccga tagaccgttc acctaggtag ctggcacgtc ctttagttgc ttttaaatct
    21361 tttgtttttt gtaaagctgc ttcaacaaca tcatctgtta aatcttcctg atgaagggca
    21421 tttacaactg gttcccaaac atcaatcatt gttttctcgc cagcatggga tttaccgcgt
    21481 ttttcaatcc cttcaagtcc tgcttcaagc actttggtta agccttccgc gtcaattgtt
    21541 tctgaatcta ccgctttact catgtttaaa aaggctgttc cataaagtgg tccagatgcg
    21601 ccgccgacct tgctgaccat cgtcatccca gcggttttaa atacatcttt taaatcagcg
    21661 ggttcttttt ctgtgaaagc ttttttgagt tcgccgagtc cgcgagccat attgataccg
    21721 tggtctccat caccaatcgc ttggtcgaga tcacttaata attgtttgtt ttcttgtacg
    21781 cgttcgccga agtcatttaa ccagcgtaac gcccaatctt tatcataagt catgattcat
    21841 tcctccaaat tttattacca tgcaattgtg tccactggga gtttcaacat atcaacccat
    21901 ttttcgtcct ctaatttcaa aatggttaag gataaaccag ccatttcaag agaagtcata
    21961 taatctccaa cgagtgtttt ttcaacttga acgccggcat tttttagaag ttcatggaca
    22021 tcatttgcga aaacatattg ttccataagt ggtgttgcgc ccatgccgtt cacgagcaca
    22081 accactttat ctccaggtag gaatttgctt tcattgctaa tccgttcgta cagttgcttc
    22141 gctaaacttg cagatggcat gattttttca cgcgtaaagc caggttcacc gtggatacca
    22201 atgccaagtt cgatttcgtc gtcaccaagc tcaaagccag gatgtccaac ctcaggaaca
    22261 gtacacggag taagtgcgac accaagcgtt ttaaccgaag caattacttt ttcaccaagg
    22321 gctttcagtt catcaagaga tgcgcctgct tctgcggctg ccccgataat tttatgcacg
    22381 agaacagtcc cggctacacc gcggcgtccc gttgtaaaag tactatcctc aacagcaata
    22441 tcatcatcta ctacaatttg ttctacttta atatcatcgg catctgctaa atctgccgcc
    22501 atttcaaaat tcattacgtc accagtataa ttttttacga ttaaaagtac accagcgcct
    22561 tgatctgcgg cttttatacc ttcataaatt tggtcgggag ttggggaagt gaaaacatcg
    22621 ccacatacag ccgcagagag cattccgcga ccaacataac cagcatgagc cggctcgtga
    22681 ccagaacctc caccgcttac aagtccgact tttcctggac gtttatcatt tcttgcaatg
    22741 acgcgagttc cttcgacacg gtgaacaaca tcagcatgcg atttcactaa accttccacc
    22801 atctgttcta ctacttgatc agtaccgtta agaatcttct tcatctgaca aaaaacctcc
    22861 tttaaaattg tcctcttacc tcaatttccc tttactagaa agtcaaaacg tagttgctgt
    22921 ctttattata caacttataa aatgaaaacg ctttaaaact gcaagaatgt gtcataaacc
    22981 cagcaaaatg gtacaatgaa ggagagaatt tgaaaagggg aattgttatg aggaatcaat
    23041 ctaaaatgcc tttagtggaa cggttagatg ctcatgctaa gtcttgccca atatcactcc
    23101 atgtgccagg acacaaaagc ggagccattt atccagatgc atggcaaaaa tttttgaaat
    23161 gggacgtaac agaaattact ggaatggatg atttgcatca cccagaagat gtgattttgg
    23221 aagcagagga gttacttgcg gaatgttatg gaagcaaaaa aagctacttt ttagtcaatg
    23281 ggacaagcgg aggaagcttg gcagttatta tggcgacgtt gaagcacggg gagaaagttt
    23341 tagtgccaag agatgcgcat aaatcaatct tgcatggaat cgaactggca ggcggagaac
    23401 cgattttctt aaccccagcg acaaacgaag aagttggcgt cgcgagtggc gtgacaaccg
    23461 aacttctcga agaaacatta cataatcacc cagatataaa actatgtatt ttcacttatc
    23521 cgagctatta tggaacgact tttaacttgc ataaatgtat tcaaattgcg catgattttg
    23581 gtgcggttgt gtttgttgat gaagcgcacg gagcacattt tttaacaagt tctgaatttc
    23641 cgaaaagtgc agtggagctt ggtgcggatg tggttgttca gtcggcgcat aagacgttgc
    23701 cggcgctaac gatgggttcc tatttacatg tggtgaatga tttaccgatt tttgaaaaac
    23761 taccttatta cctgcaagta ttccaaacga gcagcccatc ttatttaatt atggcgtcac
    23821 ttgatgcggc gaggaaatat gcggcaactt acacagcggc ggacgtcgaa gctttttgga
    23881 aaatgcgtgc cagatggatt aaatggctga cgaagaataa atttgacgtt attttgccag
    23941 atgatccgct taaaatcatc gtgcgcaaaa caggctacac gggctacgaa ctgcaagcaa
    24001 tttttgaaga aagctcttat ttcccagagc ttgccgatga gtcacaggta ttactgattt
    24061 taccattaat taaaaaaggg attgatttca cgcctattag ccggattcat tctccggtga
    24121 aaaaagaaat cgcgaaagaa ccatatgaaa tgtcagcgcc ttttgcgtca ggtcttgcgc
    24181 taacttatga agaaatgcac gcacgcgcga ccgaattcgt attactagat gaagctacga
    24241 cacgcgtttc ggctgaaaca atctcgctct atccgccggg aattccagca atcatccgcg
    24301 gagaaagcat cacagaaaag catattcgcg aactaaaaaa cattcgcaca cgccactacc
    24361 aaggcggcga aaaactagcc gagaattaca tccgtgtatt ccgctaattt atgctataat
    24421 caaacagaaa gcgacgcgaa agggaaagga aattactaaa tgaaagcaat ttttattaca
    24481 ctcgaaggcc cagatggctc tggtaaaaca acagtaggaa cactacttaa tcaaaaaatg
    24541 acggaagctg gcattgattt tattaaaacg cgcgaaccag gtggcagccc gatttcagaa
    24601 aaagtaagaa atatcgtgct cggaattggc aatgaagaaa tggacccaaa aacagaagta
    24661 ctacttattg cgggagcgcg ccgtcaacat gtcgttgaaa caatccgtcc agctctagcg
    24721 gcagggaaaa cagtactgtg tgaccgtttc atggatagct ctcttgcgta tcaaggtgcc
    24781 ggacgtgaca tgaatatgga acaagtttta caagtgaatt tatatgcgat tgaggataca
    24841 ttgcctgacc ggacgtacta tctcgatgtg cctgccgaag tcggtttagc tagaatcgcc
    24901 gctaataagg gccgtgaagt caatcgcttg gataaagaag atattaccta ccacgaaaaa
    24961 gtccaagctg gttacgaaaa agtcatcaac atgttcccgg aacgttttat gcgagtggac
    25021 gctacaaaga caccagaaga aatcacagaa actattttag ccgacatttt acgacaatta
    25081 gcctaacatc tagtgggact tcaacacctt gccacaagtg catatcgctc tttaaaatgg
    25141 tgtttgtttg ctataataga aaaaaagata gatttttagg aagggttgat ttctttgaaa
    25201 ctgatatttg caatcgtcca agaccaagat agcaaccgtt tgtctgacgc acttacaaaa
    25261 ggcaatttcg gtgcgaccaa gttagctaca actggtggat ttttaaaagc aggcaacacc
    25321 acatttatca tcggtacaga agatgaacgt gtagaagatg ccctagcgat aatcaaggaa
    25381 aactgtaaag cacgcgaaca aatgatgaca ccatccgctt ccttaggtgt gacggtagat
    25441 acgtatgtgc cttacccaat cgaagtacaa gttggcggcg caaccgtatt tgtaatgccg
    25501 gtggaaagtt tccatcattt ttaaaacaga gaaaaagcag gtatgcgata agggctacct
    25561 gcttttttta tctataatgg gaattagatg ctttaaacta tcaatgcgag ataaatgaat
    25621 tataaccaat agactctgct attcagattg tcattagaat ctgtttaatt taataaaaaa
    25681 accgcagaca aagcaatttc tcgctttatc cgcagtttct gacctatctc gctcatgagg
    25741 taggcttttt acattcactt aatcgtcaat ttctgtccaa catgaatcat gttgcttgtt
    25801 aacttgttcc aagctttaat attatctaca gttgttttat attgtctaga aatggcccat
    25861 aaagagtcgc cttttttgac ggtgtatgtt tttactgtgg aattacttgg tttatttgtg
    25921 cttggttttg cggtatttgt gtttgtagta gttccggcgc taactttaag tttttgtcct
    25981 gggtaaatga aatcggattt taagttgttc caggatttta ggttagcaat agttactttg
    26041 tggttgttag cgattctcca aagtgagtca ccttttgcta ccgtataaac tttagcgttc
    26101 gtgttcgtat ttgtgcttgg tttggatgta ttcgtgtttg tgctcggttt agaagtattt
    26161 gtgttagaag tagaaccggc acttacttta agtttttgcc ctggataaat gaaatcggat
    26221 ttcagattgt tccaggattt taggttagca atagttactt tatggttgtt agcgattctc
    26281 caaagcgagt caccttttac aactgtgtat actttagcgt ttgtgctagt gcctgtactt
    26341 ggtttggatg tacttgttcc tgtgctcggt ttcgatgtat tcgtatccga tgtagtggaa
    26401 ccagcactta ctttaagttt ttgccctggg taaatgaaat cagatttaag attattccaa
    26461 gcttttaggt tcgcgacggt tactttatgg ttattagcga ttctccaaag cgagtcccct
    26521 tttacaactg tgtaaatttt tgcattggag gtgtttccgg tgttgctaga atttccagtg
    26581 ttaccagtac ttccggagtt tccgccagtt gttttgccac tgtcatattg ggttaaatta
    26641 tatcggctaa tcaagtcatt taatttcgtt gcataggctg tgtctgttgc gtacgttcca
    26701 gttaaggctt tcgttgcgtc tttgtaggaa gtagtgttgc ttttccaaac tttggagtag
    26761 taatttgggt tccagcttgg gccttttcga atgacttgtg cgtaatcttc taaggattgg
    26821 tgataagacg gatattttct aaatttagct gtgattgtgt agtagtttcc tttaccatca
    26881 tcttctagtg tttgttttgt ataagattgg ccgttgtaag ctcctttgat tccaaaaagg
    26941 ttatagtttg gagcagagcc taattcgctc gttccatagg cgctttctaa aatggcttgg
    27001 gcgatcatga cagatgcgta caggtcattt tctgctgcaa tttgggaaga agaggcttgg
    27061 attgtttgga taaagctttg aacagttgct cccgaacgga gtgctgattt ttgtaatagg
    27121 ttgtatgtag ctggtgtaga agagcttgtt gcattgtcag gattgctaac tgttgcgggt
    27181 tcagctggag ctttttctac ttgcttcgct gcagcttgat tttcttctgc tgtctttgtt
    27241 tgttcttttg tttcagtttg cttagcttca acggttggtt ctgttgtgtt ttcaggagtg
    27301 gccgttgctg gtgtttcttt agttgtgtta gcttcagcgc ttttagatgc ttcgtcagca
    27361 ggcgctgttt cgtctgcgct aacgattact tcgatgccgg gaacagtgat agaggttgcg
    27421 atggcagtaa ccccagcaat cgttgcacca gttttgaatt ttttactttt tttgtttttc
    27481 ttttcttctt gtaaggcttc aagaatacgt tcttttctcg tcttttgcat ggtaagtcac
    27541 ttccgattct ttaaatattc tacatccatt attacatact tcacattact tatgattgat
    27601 atcgacaaat tgtaattaaa ttgtcaaaaa ggctcgtctt tgttatactg aatataagca
    27661 agtgcttact tagttgaacg ggggtaaaat aatgattaca aacgaatcca tcatggatgc
    27721 aacgctttgt atgatggcga aacacggcat caaaggctcc acaacaagac aattagcaga
    27781 agccgctgga ataaatgaag ctacgatttt taaaaaattt aagagtaaag acaatcttat
    27841 tcatatgacg ctggaagtcc aatttgaaag tatgaaggcg gaaatcaatc aattttttga
    27901 taaagatttt gagagtgcca aggtgtttct acgtcaagcg agtcaattta tttcggatat
    27961 ttatgaaaaa tatcgggact ttatggtgat ttctgttcga gaaatgggca gcaaagatat
    28021 ggaatttatt gatccatcga ttgtggaata tttgtatgaa cgggttaatc aaaaagtaaa
    28081 agaaatggtt ccgagtaaga actctgcgca agaagcagat gcgatttctt tgattttaaa
    28141 tagtgttatt ttgcttatta tggtggaaaa agtacgcgat gatatttata agcgcccgcc
    28201 aacgattaca acaaccgcag attcattagc agatgttttg ttaaaattat tgaaataaat
    28261 cacgaaaagt taaataaaag ttaagtattt tacattttgt cttgcgggct tagattttct
    28321 atgttaaact cgtagacgat tagagcgata ataaatatgt agttttgcct gttaggtgag
    28381 gctcctatgc aaacacaggc cactgcccaa aaatgtccaa agacgccaat gggtagaaca
    28441 gggattgtcg gattaaggct ttccataatg tggctaagag tattctttac gttgcatagt
    28501 gccaaaactt tagcgagggg agtctgtttt agtatgcgta taaactcaga agtccttgcc
    28561 aaggttttgg taaggacttt tttcatgttt attatgaaaa taattatctg ggaattaaaa
    28621 tctttttttc agataattaa gcttagataa aattcgaaag gagatgaagg caatggacca
    28681 ccatcaggga gaggaagtag aagaaccgga ctcgtattat agtaatcaag ctgcaagagt
    28741 gactaacctt catctctggc gcacataaac gttattctca gcttgcctag aaagaattgg
    28801 aggcaaggaa aatgaaaaaa ctacatgtaa aaaagcaagg taacaatttg ctcaaagagt
    28861 cacaaatagg caaagaaaaa gttttggaaa agttaggtgt tatggaaacg gggctcacaa
    28921 acgtagaagt tacagaaaga ttagcggaat ttggtcccaa tcaaactgtg gaagaaaaga
    28981 aagtatcaaa tttgcggctc tttattcggg cgtttaatga tccgtttatc tatattttag
    29041 cgatgttaat ggttgtttcg tatttgacgg acgacatgga agcgactgtg attatggcac
    29101 taatgatact tgcgagcggg atacttggat ttattcaaac aagtagagca gaacgggcga
    29161 gttacgcatt aaaaaatatg gtgaaaaata gagtcaatgt tattcgaaat ggctccatgg
    29221 atttgataat gcaagacgca atcgtacctg gagatttaat tgaaatttcg gcgggagata
    29281 ttatcccagc agatgcgcga gttatttcgg ctacggattt attaattaat caatcggcgc
    29341 tcactggaga atcgattcct gctgaaaaat ttgtggaaga caaaagtgcc aatccagaaa
    29401 tttttgaacg ggaaaaccta ttatttatgg gaacagatgt gttaagtggg catggtcggg
    29461 cagttgtttt gcggactgga agctcgacgt tctttggttc gttgtccatc gcagctactg
    29521 aacggcgcgg cgatactagt tttgataaag gtgttaaatc aatttcgaaa ttactatttt
    29581 attttatgat ggtgatggta ccgattgtat ttatgattaa tgggcttatg aagggcaatt
    29641 ggttagaagc atttctatat gcagtagcga ttgctgttgg ccttacaccc gagatgctac
    29701 ctatgattgt cagcacgaac ttggcaaaag gtgcaatcaa tatgtcgaag aaaaaagtaa
    29761 tcatgaaaga actgagcgcc attcaaaata ttggtgcaat ggacattttg tgtacggata
    29821 aaactggaac actcacagaa gataaactag aacttataaa atacattgat agtgctggcg
    29881 aaacctcaga acgcgtctta aaaatggctt atttaaacag ttacttccaa actggttgga
    29941 aaaatgtttt agatcatgca gttattgcca aattggatga gagtactgca gcagcttgga
    30001 aaaaagttgg cgagattcca ttcaattttg atcgtcgccg tttgagcgta gtggtcgaaa
    30061 ataaggcaga aacaaggatg attacaaaag gcgcggtgga agaaatgctc actgtatgca
    30121 ctcataagga atttggcggt gctgtttcga cactatccga atcggaaaag agcgaacttc
    30181 aagacatgtg tgccgaaatg aatcgctcag gaattcgtgt gattgctgtg gcttataaaa
    30241 ctggaagagt cggagaagca tttactaaga ccgacgaaga acaaatgatt attgcgggat
    30301 tccttggttt ccgcgatcca gtaaaagcat cgacgaaaga agcaatcgct catcttttta
    30361 aaaatcaaat taacgtaaaa gttttgacgg gtgataacga aattgttacg aaacgaattt
    30421 gtcaggaagt tggcattcca gcgaacggat ttttactagg tgcggatata gaagagcttt
    30481 ccgatgaaga acttacgcgc gaactgcgaa aatatcacat ttttgctaaa ttaaccccaa
    30541 tgcaaaaatc gcgaatcatt ggtttgctta aaaaagcggg gcatacggtt ggatttcttg
    30601 gtgacggaat taatgatgct ccggctctta ggaaagcgga tgttggcatt tcggtagata
    30661 cagcggccga tattacaaaa gatgccagct cagtcatctt acttgagaaa agcttaacgg
    30721 ttttaaatga tgcggtgatg gaaggtcgga atgtattcgg taatattcta aaatacctta
    30781 aaatgacggc cagctctaac tttggtaatg tgtttagtgt tttggttgcg agtgcattta
    30841 ttccattttt accaatgcta tcgttacacc ttttactgca aaatttattg tatgatttct
    30901 cccaattaac acttccttgg gacaaaatgg atcgctcatt tttgaagaag ccgcatcaat
    30961 gggaacaaaa aggaatgttg cgctttattc tgtgcattgg cccggtaagt tcgatctttg
    31021 atattgcgac atttctaatt atgtggtttg tatttagtgc gaatacggtg gcggagcaag
    31081 cattattcca cagtggctgg ttcgtggttg gcttacttac gcaaacatta gtcgtacaca
    31141 tgattcgtac agagaaaata ccgttcattc aaagtcgggc agctgcacct gtcatgattg
    31201 caacgcttag tgtaatggcg cttgggatta ttattccatt tacaggattc ggtcacagca
    31261 ttgggtttgt cagcttgcct ggtagttatt tcccttggtt gatattgatt ttggttggct
    31321 acatggctac gatgcaactg gtgaaaacta tttatattcg gaaattccgg gagtggattt
    31381 aaatgcgggc aggacgcgtg ctgtttgtaa cgtatatact tctggcgata tggagtttgc
    31441 tacttgttta tagtacgagt tatggtgttg ctgttatgcg atacaaagtg gagccgagtt
    31501 atttctttca taggcaatta cttttttatg ggcttggttt tttaggacta ctcgtttgct
    31561 cgcgcattaa tgtgcaacta ttttacctga gacgaacgct tcggattttg gctggaagtt
    31621 tgcttgggtt actgctgtta gtgcttctaa caggaagtgc ggcgaacaat gcgcaaagat
    31681 ggctgtctat tgcgggtgtg acgttccaac ctactgagat ggttaaattg ctgctgatac
    31741 tagtaatcgc aacagttttt ttgaaaaaag gttgtggtgt tcgcgtgcaa tattggttgc
    31801 ttggattttt gtttttaaca gtggggcttg tcttcttgca gccggatctt ggaactgcac
    31861 tgattttagg tgttattggg gtcgctttgt ttttaacaag cggagtcggc ctcacacgcc
    31921 ttgtgcgagt ggctatttgg tctttcggtc tcttattact tgtagcaatg ctgctttatt
    31981 tctttcaccc agactttttt agttcagcca aattgggtag atttgctttt ctggatccgt
    32041 ttaacctaga taatttagat gcctcttatc aactcagaaa tggctattac gcgattggga
    32101 gcggtgggat atttggaaat ggcttgggag gcagtatcca gaagttaggt tatttgccgg
    32161 agccgcatac ggattttatt atgacggtaa ttgcagagga acttggtgtt tttggtgtta
    32221 tttggacgat atttttgttg atgatgctaa gttttacagc gctctatatt gctattagta
    32281 gtcattttat ttttgattcg atggtttgta taggtgtttc ttcttgggtg tcggtgcaga
    32341 cgtttttgaa tcttggtgga gtgagtggaa ttattccgct tactggtgtg ccactgccat
    32401 ttattagcta tggtggcagt tcggttgtca tgctttcgtg tgcagtagga tttgtactgg
    32461 cggcggcgag acggaacgta ctagctaaaa cgagagaggt cgtgtattta tgaaacgaga
    32521 tgtactttat aaccggatta ttttatcggt gttcttattg tctttagtta gttgtgtggc
    32581 aatctattat gcgcagcaga caaatcagta caatacgaat tttttaggaa tgcaattggt
    32641 gtttttagca attgggacgc ttacgtgttt tggtgtttct aggcttccgg tggagttttt
    32701 gcgacatcat gcgatttggt tgtatgtgat tatggtcatt acgctcctag gtatactcat
    32761 tcctaatcct ttagtacaaa atataaatgg agcgacacgt tggtatcgtt ttgcagggct
    32821 atcttttcaa ccttctgaag tagtaaaatc catatttatc tttgtattgg cgcattttgc
    32881 agtgaaatat caagcacaaa aatggaaaca attagggatt ctgacggtgc ttacggggat
    32941 agtattacta ttaattatga aacaaccaga ccttggtacg acgattgttt acggggttac
    33001 ggcgctagcg attattttac tggcaattaa atcaaccaaa ctgatggtcg gaattattac
    33061 gttaatctta acagctgcaa cagttggtat gtatgttgtc gtgtatcaca ttagcttatt
    33121 agagaaaatt gggtttcacg cgtaccagtt ttcacggatt cagacgtggc ttgatccaac
    33181 aactgaccca gacgccgtgt accaacttaa cttgtcgata aaggcggttg gttcggggat
    33241 gatgactggt agttcgggga caaatgcgta tatccctgaa agccatactg atatgatttt
    33301 tagtacgatt ggtcatcagt ttgggtttgt tggtgtaagt ttgttgttaa ttttatttat
    33361 gctacttatc catcaattaa ttatggcagc gctattgatg aagaatacct tttcttcgct
    33421 tgttttagcg ggctttgcag tgagttttgc ctttaatatt tttgaaaata ttggcatgac
    33481 tgttgggctt atgccgctga cagggattcc gcttcctttc attagttatg gtgggagtgc
    33541 tgtgctaggt aattttattg cagtgggtgt agtgctagcg attatccggt cagatgccga
    33601 tttaatagaa gaaaaaaacc agctgtcatg acgacaactg gtttttttag tgttatttat
    33661 tcttataaag gtctacaatt tctttcgcta aatctttgaa agtgattgca ttcattaagt
    33721 ggtcttgtgc gtgaacgagt agaagggaaa cttctgtttt ttcgccacgt gcttcacctt
    33781 gtataagttt tgtttgagaa tgatgcgctt caagtagtgc ttgttctgct tgggcgattt
    33841 gttcgtctgc ttgagcgaaa tccccttttt tagcggaatc aatggctaac atagcatcgc
    33901 ttttagcgtt accaccgaac acgatcaagc tcataatagt ttgctctaaa tccatctgta
    33961 aacacgtcct taaagttttg gtttttaaaa attattcagc agtaacgcct tcagcagcaa
    34021 gtgcttcttt ttcacgacgt agctcttgaa tttgagcaat tttcgcgaat ggaaggaaga
    34081 ttaggataga tagacctaag tttacagctg caagtacgcc acctgcgata ctttgtgttg
    34141 caagtgctcc accgataatt ggtggtgtag tccaaggagt tacgatagta caagctggta
    34201 cccaaccaat agctgttgca aagtaagcta cagttacaag tacaagtggt gccaagatgt
    34261 acggaatgaa cataattgga ttcaagacga ttggaagacc aaacatcatt ggttcgttaa
    34321 tgttgaaaat acctggcgct gcagacaatt tagaaactgt catgtacgct ttatgtttac
    34381 gagctacgat aaagatagca atgattaaac cgatagttgc cccagttccg cctaagttaa
    34441 cgaaagagtc aaagaaaggt ttgttaacga tgtaaggaag ttctttacca gcttctagtg
    34501 cttttacgtt agcttcgata gctgggatgt tgattgtttg catgaacggg tcgataatgt
    34561 tcgcaccgtg taaaccaaag aaccaaagga aagcagaaac aaatgccaat aataaagctg
    34621 ctggcaagga gtttgcaaga cccatgaacg gttcttgtac taattcgtag aaagaaatta
    34681 ctaagttagt cacaccagct gcttggaaga acgcagtgat aagaccaaag atagaaacag
    34741 tgatcattgc agggaataaa gctgcgaatg aacgagaaac tgccggtgga acaccatcag
    34801 gcatgttgat aattaatttc gggctaccac ttaaacgagt gaagatttca gtggaaagaa
    34861 ttgcaataat taatgctaag aaaagaccag ttgatccaag accaccagtg tttgcaacgc
    34921 cgtctgcacc tggagcaatt gcgccaattg tgaagaaagt tgctacagaa actactgcgg
    34981 aagaaagtgg atctttgtca taagatttag ctaagttgta agctacagtg aaagcgataa
    35041 gtagtgctaa gatagcaaaa gtaccgttcc aaacgtttcc gccgaatgct tgccaagttc
    35101 cttcaccaaa taagttattc atgaactttt ggtaagctgg aattgggaag ttgttaatta
    35161 aaacggcgaa agaccctaga atcataagtg gcatagttgt aatgaaacca tcacgaattg
    35221 ctactaaatg acgttgtcca ccaattttgg cagcgtaggg aatgaaatat ttctccataa
    35281 atgcgataaa accattcatt ttttattctc ctttttgagg gataaagtaa cagccgggtt
    35341 aagacgaata cataatttct aaaacatggc gttattacta tacctcttta gttttttata
    35401 attttcagct agctagctgt aattaccctc tttttacttc attaactcta atgcttgttc
    35461 taaaactttg tcgcctttca tcattccgta atcaacactg ttaataacag ctaatggaat
    35521 accttttggc tctaattttt tcttcatgtt tccttctaag aaacgtactt gtggtccaag
    35581 taataaaaca tcgatttcgt ctaaatggtt agctgcttct gcttctgcaa cggcgaagat
    35641 ttttgcttca aggccttttt ctgcagctgc tttttccatt tttgtaacta gtaagctggt
    35701 agacatacct gctgaacata ctaacatgat tgttttcatg attatttcct cctctagata
    35761 attctcttaa cacttattat atatgcaagt accgtgccaa ctttaaatgt ggctataaaa
    35821 gggttttcat tttgtttttt gcttacacat tggctttttt tgtgtgtaaa ttttacacac
    35881 atagagatat taacggaatc tttatgcgga gctttagaat cttaacactg tctttatgcg
    35941 tttgttggta ggattagtgg tggaaagagt acggtgaagg ggtgaacgga aaatgggtgt
    36001 tgttctagta attgctggaa taatcggttt aggtttgttg gtatatttat tttatgtgtt
    36061 atttagaggt gaggacttat gaagtatatc gtgatgcaag atgcgttttt tgttgtattg
    36121 ttattagttt tggcggtgcc tcttggaatt tatatgtata aggtgatgat tggggaaaag
    36181 gtatttttgt cacgagtgct tgagccggtt gagcggtttg gttatcgatt gatgggtgtg
    36241 agtgaggttg gcatgtcggc gaagcgttat gcagtatccg tacttgcttt tagtgcagtt
    36301 ggctttgtat ttgtaatggc ggtgttgatg ctacaaggct ttttaccgct caacccggaa
    36361 ggtatgaaag gacttagttt tagtcttgca tttaatacgg cggcgagttt tgtgtcgaat
    36421 acgaactggc aagcttattc tggtgaggcg gcgttatctt atttttcgca gtcgattggt
    36481 ttaacggtgc agaactttgt ttcggcagcg acagggattg cagtattatt tgcggtaatt
    36541 cgtggcttta tatggaagaa acagaaaacg ataggaaatt tttggcaaga tttatttcga
    36601 gtgacgctat atattctatt accactttcg cttattttgg cgcttctttt agtgtcgcaa
    36661 ggagtggtgc agtcatttgc tgattattcg gttgtagaga cgcttgaaaa tggagcaaaa
    36721 caattgattc cgcttggtcc agctgcaagt caaattgcga ttaaacaact gggaacgaat
    36781 ggtggaggct ttttcggggc aaattcggcg tttccgtttg aaaacccatc tagttttact
    36841 aatttaatag aaatgttggc gattttactt atcccagtgg cgcttgttgt gatgtttggg
    36901 cgtgcggtga aggatagtaa gcaaggacgc gcgattatga cagcgatgat gattgttttt
    36961 gttattggtg ttgttgcgat aactatctcc gaacaatttg caggtccaca ttatcaaggt
    37021 gttgcgactt ctggcagtat ggaaggaaaa gaggttcgtt ttggtgttgg cggttcgtcg
    37081 ctttttgcag cttccacgac ggcagcctcg aatggagcgg tgaacgcaat gcacgacagt
    37141 ttgactccgc ttgggggact ggtgccgatg ttctttatgc aactcggtga ggttgttttt
    37201 ggcggtgttg gtagcgggct ttatggcatg attggtttta ttattttgac ggtgtttatt
    37261 gcggggcttt tggttgggcg gacgccggaa tatttaggga agaaaattga accttatgat
    37321 atgaaaatgg tttgtttgct tattttggtt ccgccgctgt tgactttgtt tggaactgcg
    37381 gttgcggtga tgatgccaag tgtgcaagct tctgtttcgg cgagtggggc gcacggtttt
    37441 tccgaggtcc tctatgcatt tacttcgatg ggaaataata atggtagtgc ttttgctgga
    37501 tttgcggcgg acacgacgtt tacaaatatg gttggcgcag taatgatgtt acttgctcgt
    37561 tttattccac ttgttgcggc gctttattta gcgcaaaata tggctggaaa gagttcggtt
    37621 gcagcgagca gcgggacgtt atcgacgaaa aatggcatgt ttattggtct tttaattggt
    37681 gttgtggtac ttgttggcgc acttagtttc ttgccagcac ttgcgcttgg accgattgcg
    37741 gacttcttta caactttcaa atgaggtgaa tggaaatgat ggaaaaaggt atttggaaag
    37801 atgcgctgat tcagtcgacg aaaaaactgt ctccaaaact gcaagtgaaa aatccggtga
    37861 tgttgcttgt ttatgttggt gcgattttgg caacgagcct ttattttctc ggtttcttcg
    37921 ggatttcaga tgagaagtct ggttatacgc tagcaattgc gctgatttta tggtttacag
    37981 tgttatttgc gaattttgca gaggcgattg cggaaggtcg cggtcgagca caggcggata
    38041 gtttgaaaat ggctcgaaaa gacgttttag ctcgaaaatt gaagaatatt gatgataaaa
    38101 ctgatgtgat cgaaattgct tcgaatgact tgaaaaaagg cgacattgtg tatgtccttg
    38161 cgaatgaaca aattccgatg gatggcgagg ttattgaagg tgcggcttca gttgatgaaa
    38221 gtgcgataac tggggagtct gcacccgtaa ttcgagagtc tggcggggat agaagtgctg
    38281 tgacgggtgg aactacgctt gtttctgact ggcttgttgt tcgtgtgacg gcggtctctg
    38341 gagaaagttt cttagataaa atgattgcaa tggtggaagg agcttcacgg aaaaagacgc
    38401 cgaatgagat tgcgctacaa attttgcttg taacgctttc gattattttt ttggcagttt
    38461 cagcgacgct tttaccattt actgaatttg cgagtaagca ggcgggtgct ggatcggcaa
    38521 tttcgattac gaatgtgatt gctttgcttg tttgtttggc gccaactacg attggtgcac
    38581 tactttcgtc gattggaatt gcagggatga gtcggttaaa tcaagcgaat gttttagcga
    38641 tgagtggtcg tgcgattgag gcagctggtg atgtggatgt gcttttgctc gataaaactg
    38701 ggacgattac actgggaaac cgcaaagcaa gcgaattttt gccagtggat ggtgtgacgg
    38761 aacaagagct ggcagatgcg gcgcaacttt cctcgattgc ggacgaaaca gcggaaggca
    38821 ggagtattgt tgtattagcg aaagaacggt tcgacattcg cggccgagat tttgctgaaa
    38881 tgcacgcaga atttgttccc ttcactgcaa caacccgaat gagcggaatt gactatcaag
    38941 aaaatacgat tcgaaaaggt gcggcggatg cggttcgtgc ttacgtaacg gcgaatggcg
    39001 ggacgtaccc aaaagagtgt gatgcaattg tgagcaaagt tgctggtgct ggtggtacac
    39061 cgcttgtagt agtccgaaat aacaaagtgc taggcgttat ttatttaaaa gacatcgtga
    39121 aaaatggagt gaaagaacgt ttccttgatt tacgaaaaat gggtattaaa accattatga
    39181 ttaccggtga taacccaatg actgcggcag ccattgcggc ggaagcaggg gtcgatgatt
    39241 ttctagcaga agcaactcca gaagcaaaat tggaattaat tcgtgaatat caacgggaag
    39301 gtcatttggt tgcaatgaca ggtgatggca cgaatgacgc accagctctt gcacaagcgg
    39361 atgttgctgt tgcgatgaat acaggaacac aagcggcaaa agaagctggg aatatggttg
    39421 atctggattc tagtcctact aaattaattg atattgtgcg gattggcaaa caacttttaa
    39481 tgacgcgtgg tgcactgaca acatttagtg ttgctaatga tttagcgaaa tactttgcga
    39541 ttattccagt gctgttttac ggtattttcc cacaacttga agcacttaat ttaatgggat
    39601 taaccagccc gacgagcgct attttatccg cgattattta caatgcggtg attatcatta
    39661 ttttaattcc gctttcttta aaaggcgtga agtatcgtga aatgccggcc gggaaattac
    39721 tgagcagaaa tatgttgatt tatggtctgg gcggtttgat tgctccattt atcgcgatta
    39781 aattgattga tatgctgtta actgttttag gaatcgttta agagggggag aaaacatgaa
    39841 aagatttatg caaatttgga agccggcagt agttggattt ctacttttga cattgatgtg
    39901 tggtgtggtt tatccaggta ttgtcactat ttttgcaagt gcagctttcc acgacaaagc
    39961 aaatggcagt ataatagaag aaaaacgagc agatggtacg accggaaaag ttggttctgc
    40021 tgaaattggc caaacgttta ctaagcctga gtacttgatt ggacgggcag caagtgacgg
    40081 ggtggcgaca aacttaaacc ctactagcga agaacaaaaa caattagtag aaaaacgaat
    40141 tgcttggtgg cataaactag atccgacgaa caatcgagtt attccaatgg atctcgtaac
    40201 agcatcagca agtggcgtgg atccggatat ttcagaggct gctgcggcat atcaagtaga
    40261 ccgaatttct agagaacgag gcatttccac caaacaagtc aaagaaatta tcgcagaaca
    40321 tacaagtgac cgattgttag gcttttgggg tgagccaact gtgaacgtct tacaagtgaa
    40381 tttggcatta gatagattga aaatgtaagt tggaggcgag tatatggaaa cgaatcgtcc
    40441 aagtccggat gcgctactgg tgaatttgca agaagaaaca gattcatccg tgggtaaatt
    40501 aaaaatatat tttggctttg cggcaggtgt tgggaaaaca tatgccatgt taagtgacgc
    40561 caaagatcaa ttagcagcag gtgtggatgt cgtggcgggt tatattgaac ctcatgctcg
    40621 cgaggaaacg ctgagaatgt tagaaggaat cccgattatt ccaccaaaag caattactca
    40681 caaaaatatt gcgctcaaag aattcgattt ggacgaagcg ttgaaacgga agccggaact
    40741 tattttggta gacgaactcg cacatacgaa cgcatcaggt gtacgcaata agaaacgttt
    40801 ccaagatgtg gaagaattgc ttcaagcggg aattgatgtg tatacgactg tcaatgtgca
    40861 acatattgaa agtttaaacg atattgtaga aggcatcacc aaagtagctg ttcgcgaaac
    40921 gattcctgac tatgtttttg atgaggcgga ccgagttaaa ttaattgata ttgaacccga
    40981 tgaacttcta aaacggttag aacagggtaa aatttatcaa ccggcgcgcg caaaaacagc
    41041 tatgcagaac ttcttcacta gagaaaactt aaaactcttg cgtgaaattg cgatgcgaaa
    41101 agcggccgac cgaattagtc acgaatacga tcaaacaggt gtttatccag agaaacgggc
    41161 gagtagtaaa tggttagtct gtattggaac gtcgccttca tctgcaaaac tcattcgctg
    41221 gacagcgcgc actgccgagg ctttccgcgc accatggacg gccctttata ttgaaaatga
    41281 agaaaatgat tatatgacca aagcagagaa aaaatgttta cgggaaacga tggaactcgc
    41341 tgaacggctt ggcgctgaaa ttgtcaccct cgccggacat gacattgcag aaacagtagc
    41401 tgagtatgcc cggttgactg gtgtgacaaa tatcgttgtc gggaaatcgc gtcgccgcat
    41461 gggtttaagg tctttatttg aagatgattt tgaggatcgt ctcattacgc accttgataa
    41521 cgttgatatg catattatcc cctcgagcca accaaaaacg aaaaagcgtc gaatgaaaat
    41581 gcgttttaaa agttttttaa cctggcatga catggcgaaa atgattttac ttctaacatt
    41641 ggcaacggcg atttgtgtcg gtttaagtga atttggcatc ggtgatcaaa atgttattat
    41701 ggtatatatt ttatccgtgt taattatttc tcgtgtaaca agcggctatg tttatggcgt
    41761 tatgggttct atcattggtg ttatgttatt taatttcttt ttcacgacac cactttatac
    41821 gtttaataca attcaagcgg gctatccggt gacgttcgga attatgcttt tagtcgctct
    41881 tattacgagt gcgctaactg tccgaattaa aacccaagct agcctggccg ttgagcgaga
    41941 acgtcgaacc gaagtgcttt atgaaatcaa taaacggcta ttagtcaccc gtaatttaaa
    42001 aggaattatc gatttaacca acgaatatat tttgcattta tttagccgtt ccgttatttt
    42061 ttattctgcg gatcctgcca aaagtaataa agggattttc gtgcaagcag aaggaaaaga
    42121 agatgcgagt gcgcttctta gtgcggatga agaagcggtt gcccactggg tatttaaaaa
    42181 taaaaagcgg gcgggtgctg ggacggatac gttaatgggg gcatttggtt attatatgcc
    42241 agtgatgtca caggggaaag tgcttggtgt tattggtgtt tcttgctccc cagaagatgg
    42301 tccacttaca caagataatc ggatcttttt acgaatgatt agctctcaag tggcactagc
    42361 tttagaacgg caatatttat ctgaagaaca acgccaaatc gtcatcgaat cagcaaaaga
    42421 aaaaatgaga agcaatttac ttcgggcaat ttcgcatgat ttaagaacac cgctcactgg
    42481 cattgttgga gcaagttctg ccttacttga aaaagaaact gagctagata aagaaacgga
    42541 acataattta attaaaggta ttaaagatga ctctggctgg ctcattcgga tggttgagaa
    42601 tttgctttct gtgacgagaa ttagtgaagg gttagtgagt ttggaacgag ctccagaagc
    42661 cgtagaagaa attgtaggtg aggctgtcgg tcgaatcaaa aaacgtttcg cggaccgaac
    42721 aatccatgtc aaagtaccgc gcgaccttct tatggttccg atggatggca cgttaattga
    42781 gcaagtcctt attaatttaa tggaaaatgc gctacgtcat ggtggaactg gtgcagaagt
    42841 ttgggtagac gtgacgaaaa cgaagcaaag tgcgattttt agtgttcgtg ataatggaaa
    42901 agggattccg gaaaaacgct tgccagattt atttgatact tttgctgtgg aagcgagaga
    42961 gcgttctgat atgtcacgcg gattaggact tggtttatcg atttgtatgt cgattattcg
    43021 agcgcatgac gggactttag aagcgaaaaa taacaaacat ggcggggcga cattctggtt
    43081 cactttgcca ctagacggag gagatggaaa atgaacagca aacgacttgt gctaattgtg
    43141 gaagatgaag agggtatcag taattttatt tcagctgttt tgactgcgag tgattactcg
    43201 gtgattaaag cagtgaatgg aaaagaagcg ctagagcaga cagcaagcca ttcgccagat
    43261 gttgtgctac tcgacctagg tttgcccgat gtagaaggac tagacgtgct ccgtgatatt
    43321 cgtgtttggt caaaagtgcc gattattgtt gtatccgcgc gcgatcacga acgagagaaa
    43381 gtgacggcac ttgaccttgg tgcagatgat tatattacga aaccattcgg cacatcggaa
    43441 ctactggcgc ggattcgaac tgccctaaga cacattcaac caagcagcaa agaagcgcca
    43501 aatgatcata ttattcgcat tcaagacctg tatattgatg acgaccgccg acttgtcaaa
    43561 atgggcgata aggaaattca ttttacgcca attgaatata aaattttgct tctattagct
    43621 cgccacgccg gaaaagtcct tacgcatgat tttattattc gcgaaatttg gggaccttat
    43681 ccaagtgaaa accaagcact tcgggtcaat atgagtaata tccgacgtaa aattgaacaa
    43741 aatccggcag aacctgcata cattttgaca gaagttgggg ttggataccg gatggcagaa
    43801 gaataataat atgttatgat aaaaataaac gccaggagga attaatatgc ataaaacaat
    43861 ccgtagcgta gacgtttatt atgaaaaata tggtgaagga ataccgataa taatgattca
    43921 tggttttggt cctgattcgc agctgatgat tggttgcatg gagccggtct ttgataagga
    43981 aagtccattt tcacgcattt atgtggattt gcctggaatg ggaaaaaccg agaattacga
    44041 ttcaatccaa aatgctgacc atgtactcac ccttttacta gaatttattg aagcggtaat
    44101 tccgggagag caattcgtac tcgccggaga atcgtatggt ggttatttag cccgcggaat
    44161 cgcagcgaaa atgccagata gagtacttgg agtcttactt atttgcccag tcatctatcc
    44221 tgaaaaagaa agaagaacgc tacccgaaca aaaagtcatg taccaagatg atacgtttgt
    44281 acggtcgcta tcaaaagaag accgagcgta cttttcaaaa agtggcgtta ttttaacagc
    44341 aagaaactgg aatcgtttct tggcggaagt gatggcggga atgattaatg cagatggaga
    44401 atttttagac cgattatctg cgaactatgc gctgagcttt gatccagacg aaaaagcgca
    44461 attcgatgtg ccggcattat tcttatttgg gcgtcaagat gatcatgtgg gatacgcaga
    44521 cgggcttaca ttgcttgaaa aatatccaca tgcgtcgatt gctatccttg attttgcagg
    44581 acataattta caaatcgaac aaccaaaaat atttacaaca atggtagagg atttcttgtt
    44641 ccgcgtgaaa ccagaataag ttaacctttg tgaccaccaa ccatttcaga acgttttaag
    44701 ccagtcgctc catttaataa actgcttgcg tgcatgaggg atttaaaccc ataacgcgaa
    44761 cggattttgt cgaccgttat ttctaattgc tcatgattta aagttcgagt agcatcctca
    44821 aataaattga gctgcaaccc tgttttcaaa gtaatcttac cgcatgaaat agcaatggag
    44881 cgcacaggtt cgcgttcatc gtaacgtcta aatagttgca ggaaataagg aataagcgca
    44941 tgactactac tagtaggagg gattttagct tgatggctga atcctttttt tatgctgtat
    45001 ttactgtagc cgatacttag atgaataaca gcagtatcca catgattttg gcgtaaacgc
    45061 attgctactt cctcaaccat ttcgcggatg acaatctcta cttcggccgg cacatgatag
    45121 tctttttcaa gaatttggct ttttccgtag cttttactaa ctggaacata tttttcattt
    45181 aaaagactat aatcgatgcc gtgagcatga taataaagtt gctctccgac tacacccatt
    45241 gcgtttttta acacttgtgg cggcgtttgg cttagttgat acatattaaa gattcccatt
    45301 ttttgcaggc gaacagcagt ccgacgccca attccgcaca catcatccaa atgtctgatt
    45361 ttccaaatgg tctcgggaac gtcttcatag cgccattcag caatgccgtc atcccggttt
    45421 ttagccacat tatcgagcgc gagtttggca agaagagggt tgtcgccgat tccaactgta
    45481 acgtatagcc gcaattcttc taaaatatca cactggattt tgcgaacaat ttcttccgtg
    45541 ctaccgaata acaaatgcga tccggtgata tctaaaaaac attcatcaat actataaaca
    45601 tgaataaact cagcgggaac ataacgtcta aaaatggctt gaatcatcgc atttactttt
    45661 agataaagtt tcattcgtgg gggtgcgata ataattcgtt tatcccaggt gggcagttca
    45721 tacattcttg agccggtttt gatgtgatgt tcttgtttca tttttggagt ggcagctaaa
    45781 acaagcccgc cagcccggtc ggcgttactc attactacta aatatgcttc aagtggattc
    45841 agccgacgtt tgacacattc aactgaggcg aaaaaacgat ttaatatcga tgcacaaaat
    45901 atcacggcgc ggtgcacggc tataatcttc tatttgtacc atttttcgac actcctttct
    45961 tctacgtttc gaattgcaga gaaggaaagc gggacagtcc cctcagagtt tttaatgtaa
    46021 atggtgttgt tctccacgcc tgaaatacga ccaataatat cattttcagg agcagattct
    46081 gggtttaatg gctttttctg gataacaagc gtagactgat gtgtcatcgc gctagctagc
    46141 acactttcga taaattctgt agtcatagct tctttccata ctaaagttgg ttcagcgtct
    46201 tgcattgctt ctgtatgctc gcttaataaa aaaccgcccc atttcttcat gccgcgatct
    46261 tggtagctca tatgatgaca cctccaatat ttttaaataa ttagctgttg cttaaatata
    46321 ttatacgaac aaacgttctt atttacaatg tgtaaatatc ctcatttatg ctagcaaaac
    46381 gggaataaat tactatttgt gaactattaa taaagtggac ataaaaaaag accaagcctg
    46441 taaaattaga cttggtcgtt attatttttt taagcctggc tatcttcgta agcggtgatt
    46501 tgtcctacac gatttgcgtg tcggccacct tcatacgctg tttctagcca aattttgaca
    46561 atgtcttctg ctagccctgg gcctatgact ctcgctccaa gcgcaaggac atttgtatca
    46621 ttatgttcgc gcgtggcgtg agcgctaaat gtatcgccaa caagcgcgca acgaatgcct
    46681 tttactttat tagctgcaat actcatacca atacccgtac cacaaactaa aatgccgcgg
    46741 tcaacttctt ggttaacaac tttttcacta acggtaatcg ctagtcccgg ataatccact
    46801 gattctggtg cttcggggcc aaattcttca taactaattc caacactttc aagataagaa
    46861 ataatacttt ttcgtaattc aattccgcca tggtctgaag caatggcaac tttactaact
    46921 gtcatttttt ctcctcctgc cgtataatca ataccttcat tatacatgaa ttagagtttt
    46981 tcgacagtct ttctgttgcg ccaaggtttt gcgtgaacaa taataacgtc gcaaggtgca
    47041 tgagcggccg tatattcaga cacactacca agaataaatt gctctgttgc tgaaagtcca
    47101 gttgcgccaa ctaaaattaa atcaggctcg aaattccgcg ttattttttt attgaaggta
    47161 gtttttggcg taccaaagtg aacaaaagtt tctacatgcg agacaccagc tttttcagct
    47221 tcttttttgt acatttcaac taattcttct ccgtaagctt tggctttttt ggcataggtt
    47281 tgttcataat cgattaatgg tgcaatccgg cgcacatccg cgacaaagcc aataccaagc
    47341 gtagcgccat ccattttggc aaattgaaca gctcgtctta gcgcggcttc cgcttcattt
    47401 gatccatcta caccaacaag aatccgtttg taagcagaca ttttgtatca ccctctcaaa
    47461 agttttcccc ttatttactt aatacccata aataaaagaa agaagcatga ttaaagagaa
    47521 aattttgtgg tactatgagg aaaaggaggg ctctttatgg caaagctaga aacgttttat
    47581 cccattgtag ctacaccaaa gcgtgcaggc tataaagaat atctaccgag tgcggttctt
    47641 acaggctata ttcgctgttt ttgggaggcg gatgataaga atttcccggg aaataattta
    47701 gtggttcctg atttatgtgc ggatattatt tttacaattg atagtaaaac agggctagtg
    47761 acggatgcta tatttgttgg cgttagtgat gcaccgtttg agtctgacga tgaaagtaat
    47821 accgagcttt ttgctgtgcg attttatgcg tggtcgttat ttttatttgt cgaacaggac
    47881 ttgactggta gcatgaatcg ggtaaaagag ccggaagaga tgtttgctgg atttgtttcg
    47941 ttttttcaag agaggtttgc tgaaatgacg acgaacatgg aaagaatagc tttattagaa
    48001 gaatttttac tgcgaaaatt aatgatgctt ggcaagcaag tccatcctga ttttttaaac
    48061 ggtattgata agttactaca aaatcccaat caacttgcgt taggagctgt atctgttcgg
    48121 cagttagaac ggctatttca aaaacatatg ggacttgcac caaaacagac agcaaaactt
    48181 attcgtttcc aaaaagtatt acaggcatta tatgagaatc caagtgtgcc gggcgctgag
    48241 cttgcttatc ttcatggttt tacggaccag gctcacttaa ttaaacaatt taaacgatat
    48301 agtaatcaca ccccagaaga aatgaagcaa atttttctgc aaaatgtcgc aaatatacaa
    48361 tgaaaaacgt aaatgctttg ttaaactaac gatatggagg tgcttaaaat gattaatgaa
    48421 tttgtttgta caaatatttc cacgcaagat ccggcggcgt tggttgcgtt ttatcacgaa
    48481 aaattgggaa ttccgatagt attcgaaggg tacgacaatt atgacggagc gaaattaggt
    48541 ttttctgaaa aggctcccgg gattattgtt tggaataata gcaaatgggg cgaagcaagc
    48601 gaatctaaag tggagtttgt tttctcgtgt gatactaatt tggatgagat gtaccgggaa
    48661 cttcaaacag cgggagtgga gacaccagaa cctcgtgtgg ctgagtgggg cggacgtgaa
    48721 ctgaatttac ttgacccaga tggcaataag attatgattt tggagcccgc acaatgagcg
    48781 atgaatttgc ttggatacag aaggaaatca gtggtcttaa aggagtccag tattcgttta
    48841 aagaagaatg gggagcggag cgctatcacg ttttggatca gctaatggca atgcgcggaa
    48901 cgaataaaga agggcagccg attttaacct tgaagtgcga tgccgaaaaa agtgagcaac
    48961 ttcgcgcaga aaatcgagcc atcgttcccg gttattacat gaataaacga gtttggattt
    49021 ctgttttatt ggaagaagaa cgagataaag acttgattcg cgcattaatt cagcatgcgt
    49081 actcagaagc gaagaataag ttgccaaaat ataaacaagc ggaacttttt gactaattta
    49141 gttaagaagt tcttatttct gttataatga aattgattgt gaaaaagaaa acaaaaagga
    49201 gatgaaaaga tggatattaa tatgtttatc ctatacttct tcatttattc tgttcttgga
    49261 tgggcttggg aggaaatttt ttgctcgatt tcagagaaga agttagtgta tcgtggtttt
    49321 ctttatggac catattgtcc catttacggg tttggggtaa cgacagtttt aatgatgatt
    49381 ttaccgtttc aaaataactt atgggcctta tttatttttt cgatgattat ttgtacggtg
    49441 attgaatatg ttaccgcaac gattttagaa gcattattcc atacaacatg gtgggattat
    49501 cacaattggc cactcaatgt aaaaggacga atttgcttgc cgatttcgat tttttgggga
    49561 tttgcttgta ttatcgttgt acgcttcttg cacccacttg tcaccgaatt tgcagattgg
    49621 attttaagct ggggtggctg gattattcct gcactcatcg tggttctgat gcttattgat
    49681 acgattaaat ctgtcacaag tatgctatca ttccaaaaag cacttgccga atttaatgaa
    49741 aaactaactg cccaagcaaa tgaactaaaa gcaagcgtaa aagaacgggc gaaagaattt
    49801 gaagaaggac ttttgaagaa acaagaaaat gttgatatga aaattgctga aatagaagca
    49861 aaacgtaagc aagacaaaga acttgctgcc agcatgcgca aacttaaatt taatgaacga
    49921 cgaatgttaa aatcgttccc gaaaatgaaa gtgaaacgcg cggcgccatt taagaatttc
    49981 aacaaaagtt tacttcgggt cgataaacag aaaagaaaat agagaaactg attatggcgc
    50041 gaatggtatt ttttatcatt tgcgcctttt tttgcgttat tttttacaaa acgtgtagaa
    50101 agaacagcct atcttttgta tgattaagaa gaaacatcgc cccgcaaagc tccgttactt
    50161 cattctcatt tttgtttcaa agtagatttt acctaccttc aagaagtttc ataatctcgc
    50221 tatatatcaa gctttacaag caactttcac atatttgcaa ataataggat tgttaaaaaa
    50281 gtcacaagta aagcccaatg atgtacattc tttccgcaag ttattgggat gaaagcgtgt
    50341 acatttttat tagatttaga tttataatta aaacgaacag gagggaacga catgtatttg
    50401 gatgagagaa gtaattcact tttaaaagaa ctcttacgac atcctgacac atcgagtacg
    50461 aacttacaag caaaattcgg tttaactcga agacaagtcg actatagttt ccaaaaaatt
    50521 aataattggc tagaagaaca gacttacccg aagattcatc gtgccgcaaa tggtcgattt
    50581 atcgtagaac ctgacctgtt tcaaatcatt ggtgaggaag atggcgaaaa aacagattgg
    50641 tacatcccgt cagaaaagga acgcgctagt ctaatcatcc tcatgttaac aacaggaagt
    50701 gaagagttat cccttaatca ctttataagc gagctggagg tgagcaagaa caccgtatta
    50761 cgagacttga agctggtaca aaagacactt gaaaaattca accttgaagt taaatattcg
    50821 cggatgcgtg gctatttaat tgacggagac gagtggaatc agcggacggc actcatttat
    50881 gcggcagaac acatcataga aagttttggc ggcgaagagt atttacagga tttcatgcaa
    50941 gtggacgaag cgagaattaa agagcttcgg gaaaaattgg aacaagttga gcatcatctg
    51001 aatttgcatt ttattgacaa taaaatgcaa atactgcctt acattttaga agctgttttt
    51061 cggcggatga agaaggggca aacaattacg acatctttcc tgattgacta caatgaattg
    51121 tcagatactc gggaatacgg agcagcagag atttttattg aagaagagcc gaatatgcca
    51181 gaagcagagc gaatgtacat cacattacaa cttttaactt ccaatgtact tccgaaacaa
    51241 tatttgaaat cggaggaaac gcacaagtta agactggcgc tggaacaagt tctaagcgaa
    51301 tttgagaaaa aggcttgtat tcaactagta gacaaagaat cgttacttga aaaattattt
    51361 gcacacatta aacctgcgta ttatcgaatt aagtatcatc ttacaacaga ttacagcatt
    51421 ttagacaaga ttgatcaaga attccaagcc gtgcattaca tcgtgaaaga gtcgttagca
    51481 ccattagaac gttttattgg tagcaaagtt cctgaaaatg aaagtatatt tattaccctt
    51541 ttcattggag ggcatttaat cgaatccaca gagaaattac aaacgagact aaaagcagtt
    51601 gtggtttgtc cgaacggatt gtcgatttcg agattgatgg aaaaaacatt acgaagcctt
    51661 tttccggaaa tatttttcta tcaagcgatg tcgattcgag aatttgaaca aacaaagtta
    51721 ggttatgaca ttgtattttc cgcagtgcca ctttcgaccg acaagaaatt tttccttatc
    51781 aaccaactga tggatgggaa agaacgcctg gagcttagac gccgggtgat gcgagcggtt
    51841 tacttagtgg atgaggtgaa tatcagcgtc gatcaattaa tgaaaactat ttccaaattt
    51901 gctgatatta aagatgctgc ccgtcttgaa aaagtgctag cagattattt aatgccagtt
    51961 ccagaagaaa acacatccaa acacgaaggc aaaagcacac tcgcagatct actcgaagta
    52021 acgcgaatca cacgtaagaa atcagtgaaa gattggcatg aggcaattta tcatgcggct
    52081 ttaccgttac tttcggcggg agtggtggaa ccagcctacg tggaagaaat gaaacggcaa
    52141 tatccggcac cgattatgaa catcattctc cgtaatacaa tagctatccc tcatgctgaa
    52201 acggaaaaag gagtaaatag cctcggaatg agcttgcttt atctagaaga aggcctgcca
    52261 cttgaaggcg gtaaagagct acattttatc gttgtcattg cagccataga taaaaacgct
    52321 cacttcacag ctttactaca attgatggaa ttatcggaga acaaaaaaga actgaaaaaa
    52381 cttgcggatg ctgcgaacac agaagaaatg caccaaataa ttaaaaactt cacggacttg
    52441 gaaacaaaaa agacaatgta gagaagtcag aaagaattac aggaggattt cgtaatggat
    52501 ttagtacaat ttttgaaaaa aggaatggtt tgggttcaat cggatatcga gaaacaagag
    52561 gacctattcc aaatggtcgc agaaagtgga aagtctgaag gatatgtaac ggatgacttt
    52621 ttaacaagac taacagaccg tgaacaaacc tttccaacgg ggctaaaatt agatggatac
    52681 ggcgtggcat taccgcacac ggatccagaa tgcgttacgg aacaatttat cgccgtaatc
    52741 actgtgaaag atggcattcc atttaaatta atggaagatg ctggtcaaac ggttgaagcg
    52801 aatttgattt tcgtactcgg actaaatgaa cctcacagcc agctcgcggt acttcagcaa
    52861 ttgatgggga cgattcagga taaagacaat gtagccgcat tactcagagc gaaagatgaa
    52921 gacgaagtaa aacaaatttt agaaactatt accgtttaaa aaaaacagga aaattagccg
    52981 cgggaaatcg cagcaattaa ttaggaggaa tttatcatgg gacaatttaa aattttggta
    53041 gcttgtggag caggaattgc aacatcaaca gtagtaacgg acagagtaga acgtttggta
    53101 aaagaaaaca acgtggacgc agaagtaaaa caaattaaaa tttcagaagc agcatctatg
    53161 caagacggag cggatttaat cgtatcaaca actattttac caacaactta caaaatccca
    53221 gcgattattg caacttctta catcactggc atgggtatgg aagaattaga cgaagaaata
    53281 cttgcgcacc ttaaataaag gctgcgcaag ggagtttaga aatcatcatt aaacagagaa
    53341 aaaaggagga aatattaaat ggatacactt ctgtcaggag tacagtatgt tttaaacttg
    53401 gggcctacag ttattttgcc tattatgatt ttctttattg cattaatttt ccgagtacca
    53461 gcaaagaaag cgcttcgttc agcgattacg attggtatcg ggtttgtagg tattaacctt
    53521 gttattagtt tactatctag taacttaggt ccggcagcgc aacaaatggt tgagcgtttt
    53581 ggactgaatt taacaattat tgatgcaggt tggccagcag cagccgcggc ttcatgggct
    53641 tctccagttg cagcaatttt aattccaatc tgtttggtag ttaacttagc acttattttc
    53701 ttcaaagtta cgaaaacact cgatattgat atttggaact actggcactt catcgcagca
    53761 ggtgcaactg gttatatcgt aactggtggt aactggtggt tcgcgattct ttgtgcgatc
    53821 atctatgaag ttgctgttct ttggatggca gacagaacac aacctatggt agaagaattt
    53881 tacggattaa aagggatctc cttaccaaca ggttctacag cagcattcgg tttcatcggt
    53941 attccggttg gttggctaat cgctaaaatc cctggtatta aaaacatcca tgttgaccca
    54001 gaaactattc aaaaacgttt tggtattttc ggggaaccaa tgatgatggg tcttattcta
    54061 ggtattgcaa tcggtattct tgcaggctat gacgttggcg cagttgcaca acttggtatg
    54121 tccatgggtg cggtaatgtt cttaatgcct cgtatggtta aaattttaat ggaaggttta
    54181 attccaattt cagaatccgc tcgtgaattc atgaaatctc gtttcaaagg ccgcgaactt
    54241 tatatcgggc ttgatgcagc actttcaatc ggtcacccag cgaatatttc tactggttta
    54301 atccttgttc caatcactct tttcttagct gttatcattc ctggtaacaa agtacttcct
    54361 tttggtgact tggcaactat tccattctac gtatcattcg tagtagcatc tcgtaaaggt
    54421 aacattcttc actctgtttt agctggaact gtagttattg cactagcgct tcttatggca
    54481 actgacttcg gtcttgttca tacagaaatg atgaaaggtg tttacgaatt ccctaaagga
    54541 gcaacacaag ttagtacact tgatatgggt ggtaacttct ttaactgggt tattcttaaa
    54601 ttctctcaag cttgggcagc tattttctaa gttttgtctt aatgatatag aagaggtgat
    54661 agtaacatga gagcagctgt gttatacgag aataatgtaa taaaagcaga acaaattgat
    54721 gaagcgactt gtgggaaaga tcaagttcgt gtcgaagtaa aagcagtcgg aatatgcgga
    54781 tcagatattc ataaaatgca gactcgctgg aaatacccac tgcctgctgt aatgggacat
    54841 gaattcgcag gtgtagttac ggaaattggt agcgaagtaa caaacgtagc tattggtgac
    54901 cgtgttgcag ggattccgct cgagccttgt atggaatgta attattgtaa agcgggcgac
    54961 tttgcattat gtgacaacta ccggatggtg ggatcacatt ttcacggcgg atttgctgaa
    55021 aatgtcgtca tgaaagccga caatgtcatt tctatcggcg accttgattt tgaagaaggt
    55081 gcgatgattg aaccacttgc tgtatcaatg cacggagtac ttggtattca gccgagactt
    55141 ggcgatacgg tgattgtctt cggaattgga accatcggaa tcttggttgt acaatgctta
    55201 cttcttgcgg gagtaaaaga tattatcgcg gttgatatca gtgataaaaa gttagcagac
    55261 gcgcgggaat tcggttgcaa atacactatt aatccaaaaa acgaagactt aaaagaacgc
    55321 gtttttgctt atacaaatgg tcttggggca gatatagcgc tcgagtgtgc tggttccaaa
    55381 ataacgcaag aacaatgtct tcttgtaaca aagaaaaaag gtaaagttgg ttttctagga
    55441 atagcttacg cagatgtgct tttacacgag gaagcttttg aaaatatttt tagacgtgaa
    55501 cttacgctga aaggtttttg gaattcttac tcggcaccat ttcctggtga ggaatggcgt
    55561 acgtcgattg aattcgtgaa acaaggtcga attaaactga aaccactaat ttcgcatcgt
    55621 tataagctag aagaaacgaa agaagcgttt gatatgattc tttccagaga gcatgattat
    55681 aacaaagtga tgatattgcc gcagaaaggt gacgattaat ttgaaagcag tagtaaaaac
    55741 aaaccccgga tatgatcaaa tggagctaag agatgtagaa gaaccacaag tctatggcga
    55801 caaagtaaaa atcaaagtag cattcactgg tatttgcgga tcagacatcc atacgtttaa
    55861 aggtgaatac aaaaatccaa caactcccgt cacactggga catgaatttt ctggtgtcgt
    55921 tgtagaagtt gggccagatg taacaagtat caaagtggga gaccgtgtca caagtgaaac
    55981 aacttttgaa acttgtggag aatgtattta ttgtaaggaa cgtgattaca atttatgtag
    56041 caatcgtcgc ggcattggta cgcaagcaaa tggtagtttt gcagaatttg ttttatctcg
    56101 cgaagaaagt tgtcacgtgc ttgatgaacg tatttcgctc gaagcagcag cactaacaga
    56161 accgcttgca tgttgtgtgc attcggcgct tgaaaaaaca acgattcgtc cagatgacac
    56221 agtacttgtt ttcggaccag gtccaattgg tttgttacta gctcaagttg tgaaagcgca
    56281 aggggcaacg gtgattatgg caggaattac caaagatagt gaccgcttac gtctagcaaa
    56341 agagcttgga atggaccgga ttgtcgatac tttaaaagaa gacttggctg aagttgtgct
    56401 tggcatgaca gatggttacg gagcggaacg cgtatttgat tgttctggcg cagtacccgc
    56461 tgtaaatcaa ggattacctc taacgaagaa aaaaggcgat tttgttcaag taggactttt
    56521 tgccgaaaag aaaaatgcga ttgatgaaga atccattatc caacgtgaaa ttgcttatat
    56581 cggcagccgt tcgcaaaaac catcttcttg gattttagcg ctcgacttac tggcaaatgg
    56641 caaaatcaat acggataaaa tgattactaa agtatacggt ttggatgact ggcgcgaggc
    56701 tttcgaggca gttatggcag gaaatgaaat taaagtatta gtgaaatctt aataatggag
    56761 gatgggctgt atgaaaaaac atcaaaaaaa ggataaccgt gcaaacgaat ccaaagcttc
    56821 tcgggctcag atgttttaca gtagtcatcc ttagaaatga gccgagaaca tattcgcgta
    56881 tgttctcggt tccatttcat tataagacgt taaaagaaaa aaatctatta atgaaggtga
    56941 aattaaatga aattaacaat tggttgcgac cacggcggac gtagactaaa agatgccatt
    57001 gtgaaacatt tacgtgaaaa agatattgaa gttgttgata ttggaacata tacagatgaa
    57061 agtgtcgatt ttccatctta tgcagaagaa gttgccaatc aagtagtaag cgggcaatct
    57121 gaactcggta ttttgtgctg tggaactgga ataggtatga gtattgctgc taacaaagtg
    57181 gacggaatcc gtgctgcggt tgtttcggat actttctcag cgcgtgccac ccgcgaacat
    57241 aacaatagca atgttctctg tctaggcgaa cgtgttatcg gtgaaggatt agcgctttta
    57301 attgttgata cttggcttga ggcatcattt gcaggagatc gccataaacg ccgattggat
    57361 aaaattactg aactcgaaag aaagtgagga tgaacatgag gaaaatagcc gcttcaatta
    57421 tgtgtgcaga ccaactacat ttaggtgaag agctccgtcg ccttgaatct gctggtgtgg
    57481 aactactaca ctgcgatgtg atggacggtg tatatgtgaa taatcttgcg ctcggtccag
    57541 aatatttgga aatagtgcga aacaatacag aaatccctct agacatacat ttggctacga
    57601 ttaccccact taaatatatt gacatgtttg gtcctgtgaa accggaatat atttcttttc
    57661 atgtagaagt agcggaagac gtgtcagaag tcatccggaa aatccgctct tacaacgtta
    57721 aaccatcgat tgcgataaat ccagaaacac ctatcgaagc catttatcct tatttagatg
    57781 atgtcgaaat ggtgttaatg atgactgtaa acccgggttt tgcgggacaa aaatttcaaa
    57841 cagatgtatt acaaaagcta catgatttaa aagcaaaact agctggaaaa gtccatgcgc
    57901 cgctcattga agtggatggc aatattaata aagaaacagt aggcttaatg cgagattgct
    57961 taccagacat ttatgtacta ggcacatccg cgttatttca tgaccgagat aaaacgagtt
    58021 atgcagaaag actagtacac atttggtcag atgtagaaaa acatgtgtaa taaagcacaa
    58081 acaatttaag ggagatgaca gttttgaaaa aaacattaga tagacaagcc gtggacacga
    58141 ttcgttcgtt atccattgat atgattgaga aagcaaattc aggacaccca ggaatgccga
    58201 tgggagcagc tccaatggcg tatatgctat ttgcgaaaca tttagtattc aacccagcca
    58261 acccagaatg gtttaaccgc gatcgctttg ttttatcagc aggacacggg tctgcgctac
    58321 tttatagcat gcttcattta tttggttatg atgtaaaaat ggaagactta aaacagttcc
    58381 gtcaattaga tagtttgaca ccaggacacc ctgaatttgg atggactgct ggagtcgatg
    58441 caacgagtgg cccgcttgga caagggattg gtatggcggc tggaatggcg cttgcagagt
    58501 ctcatttagc ggcggagtat aaccaaccaa attatccaat tgtcgaccat tatacgtatg
    58561 cgatttgtgg tgacggagac ttgatggaag gcgtggcatc agaaacagcc tcacttgcag
    58621 gacatttagg acttgggaaa ttaatcgtat tgtacgattc caatgatatt tgtttagatg
    58681 gagatttaag cgcaacgttc agtgaaaatg cagcagaccg tttccgcgca tacggctggc
    58741 aagttttacg tgtagaagat ggcaacaatt tagcggcaat tcaagaaaaa attgttcaag
    58801 caaaattaga aacatcgaaa ccaacgctaa tcgaagtgaa aacagtcatc ggttacggcg
    58861 cgccaacaaa agcaggcagc tccgcaagtc acggtgctcc gctcggtgaa aaagaagcaa
    58921 atggtgcaaa agagcattac gaatgggcag aagagccttt cacagtacca gccgaagttc
    58981 gtgattactt aagaaattac aaagctcgcg gggaaaaact agagggtgct tggaacacaa
    59041 tgctcgctaa ttacaaaaaa gaattcccag aacttgcaag tcaattagac cgcgtgttag
    59101 cgggagaagt agctgccgat tggaacgcta atttgccaac ttttgaagca ggcacaaatg
    59161 ttgcaacgcg ctctgcttct gggaaaatga ttaacgcaat tgcagccgaa ttaccggaac
    59221 ttttcggggg atccgctgac ttaggttgct cgaacaaaac atttattgat gcgagcccag
    59281 catacagcat tcaagaccca gctggtaaaa atatctggtt cggtgtgcgc gaatttgcga
    59341 tgggagcaat gttaaacgga atggcacttc atagcggttt gcgagtgttt ggctcgactt
    59401 tcttcgtctt ctcagactat gtccgcccag caatgcggat ggctgcttta atgcaacttc
    59461 cagtaacgta tgtattcacg catgacagta tcgctgtagg tgaagacggc ccgacacatg
    59521 aaccaatcga acaactagcc tcgcttcgtg ctatgccagg cctaacagtt attcgcccag
    59581 ccgatgccaa agaaacccgc gctgcttggg aaattgccgc aactaacaca aatggtccaa
    59641 tcgcacttgt attatcacgc caagacttac cagtgcttga aaatgcacaa gaagaagtgg
    59701 atgcaggtgt agataaaggt gcttatatcg tagcaccagc aaatagttcc aaaccagacg
    59761 ctatcattat cgcaacagga tcagaagtgt cccttgcaat tgaagcgaaa gccgaacttg
    59821 cgaaaaaaga tatcgacgtt tccgttgtta gtttatccag ctgggaacgc tttgaaaaaa
    59881 caaccgatgc ttataaagaa agcattttac caaaagaagt cacagcgaga tttgcgattg
    59941 aagcaggagc aacattcggt tggaaagaat ttattgggtc agaaggcgat atgttaggaa
    60001 tcgatcactt cggcgcatct gcccctgcga aagatttgtt taacgcttat ggatttacac
    60061 cagaaaatgt ggcggatcgt gtcgaaactg tgattgcgaa agccggtgtg cgcgtatgac
    60121 attcgtagcg ccatcgttac tcgcagctga ttatatgaac atggcaaact ccattaaaga
    60181 agcagaacat gccggagctg actaccttca tatcgatgtc atggacggac attttgtgcc
    60241 gaatctgacg tttggaattg atatggtcga gcaaatcaag aaaacagcga ctattccact
    60301 ggatgtccac ttaatgctct cgaacccaga aaactatatt gaaaaatttg cagcagctgg
    60361 ggcgcacatt atttccgtgc atatcgaagc ggcgccgcac atccaccgcg tcattcaaca
    60421 aattaaggca gcgggctgta aagcgggagt cgtgcttaat ccaggaacac cggcgagcgt
    60481 gctggatgcc gttttagcag atgtagattt agttttacaa atgaccgtaa atccagggtt
    60541 tggtggacaa gctttcattg attctaccat caaaaacatg cgctatctgg atcattggcg
    60601 ccgagaaaat aacggcagct atgtgatcga agtcgacggt ggtgtaaatg ccgaaaccgc
    60661 agaaaaatgt aagcaagcgg gcgtagacgt tcttgtagca ggctcttact tctttagagc
    60721 agatgataaa attgcttgta ttaaagaatt aaaagcgtaa caaaaaaagt gctacaaacc
    60781 aactagcggt ttgtagcact tttttatgga gtggtttaac ttcttttaaa gaaaaagaag
    60841 ctagtagata acaacgtcaa taaacttcct agtgcaaaaa agagagcatc ttttgaatca
    60901 ccagtagttg ggaggatatt agaggtgttt ttatcaactt tttttgttgc ttcggatgaa
    60961 atcacagtat cattagtact cagtgtagta ttgtcggtca tttctccatt ggtatttgta
    61021 ttatcactgt ttgctatttt ttcataaata taggtaacag ttgcaggggt tgtgctaaaa
    61081 gtacccgatt catttccttc cactttttga agtttatagc ctgctatgtc tttgctttta
    61141 gtttggtagg tattaattac ttcaccggtt aaaacagtat cttttgctag tgttttaccc
    61201 gattcatctt gatattttac agtgactgtc ccattttgga cagcagtttt ttcataaata
    61261 tacgttacat tttgcagtgt ttcagaaaat tgtcctgtcg catttccggg tgtttctttt
    61321 aaagtatagc catctattat tttaggagta gtgacgtaat tttcaccaat actaccatct
    61381 aatctagtag aagtagctaa ttcattccca gacgcatctt tataggaaac taggactggt
    61441 ttagtatact tgaagtagat aaatggcttt ccagaaggac catattcaga aatatcatag
    61501 taagaatcaa atcgatttgt cccagtgaaa agtgaaaaag tagattcgag tggctctgct
    61561 gaaaagttta atgctttttc ggcttgatta tacgtaatac cattcgctaa atcagttatg
    61621 aataaattat ctgtagtcaa atgagccgaa gcatcttgaa actgaatgta attttctata
    61681 ggtaggatgt ggttgctcgg tacaatgagt gtacttaaaa ctgtttgagc ggcaaaagct
    61741 tgataagcca tttgaagatt tgggttttga attgtaatat tagtaataaa attattttca
    61801 aaggcagaag catcaatact ttcaacagtg gctggtgtag tcactgtttt taaattattc
    61861 gctaaaaatg cttgggaagg aatatttttt aaagcagtag aataagttat tttttctaat
    61921 ttattgacac taaaagagtt ccttcctata gtctgcactg agttgggtaa gactagttgt
    61981 tcaagtgaat tgatggtaaa agcaccatcg ccaatagtta taactgtatt aggaatcgtt
    62041 acattagtta atctcttgga tttgaatgcg ccattcccga tagcagtaac ggtatattca
    62101 ttattaggac caagtgttgt aggaatggta atatcagtag actgtcctgt ataatcagta
    62161 atggtagctt catttccatt tattgtatat tcatagtcac cagatgtttc ggcagaacca
    62221 atagttggaa ataaaaacaa gaatatggca aaacaaaaaa taccccaaaa tcttctttgt
    62281 aacacagaaa agccccctta cttgagtttt tttatatttt cccttacaca aaacatctaa
    62341 acttttctat attcatatct gtgtggaata agtttttttt aattgataca tgtctagcac
    62401 tagcttatac ttaaattaat acgacaacga aaaggaagag atatatgaca caactagtat
    62461 ttcgaaacgg gacagaacaa gacacgacgt taattcttcg ttttattacc gaacttgcaa
    62521 ttcatgaagg cattgaaaaa gatgtagtag caaccgaatc cggcctacac aaagcccttt
    62581 ttcaagaaaa atctgccgaa gtaattatcg ctgaatacga aggggagcca gttggtttcg
    62641 cactcttttt ccataacttt tccacattac ttggcaaaaa aggcttatac ctagaagacc
    62701 tttacatcat tccagaaatg cgcggaaaag gctttggaac aaaatttttc agctatttat
    62761 ccaaactcgc tttatcacgc gattgcggca gatttgaatg gtggtgccta aacgaaaata
    62821 aatcaggcat ggatttttac gaaaaaattg gcgcagagaa aatgtcagaa tggaccgtac
    62881 ataggctcac taaagccgaa atgaaaaaaa taagcaacct atgaaaggat gggatttaaa
    62941 tgaaatggga taaactatta aatgataaac gccgccgcga atccggtgtc actcgttcga
    63001 aaaacaccga cgtacgtagc gctttcgaaa atgattttca gcgtatcgtt atgagtgcat
    63061 cgtttcgccg tttacaagat aaaacccaag tattcccgct agaaaaaagt gattttgtgc
    63121 gtacacgact aacccattca atggaagtaa gtacaatcgc aaaatcaatg gggaacatgg
    63181 ttacacacac gattcaagaa gaaaacttag acaaagattt tacaaaagat catgcggata
    63241 aaattccgga aatccttgct tgtgcaggac ttttacatga tatgggcaat ccgccgttcg
    63301 gtcactttgg tgaagaaagt atccgtgagt ggttccgcga caatttagca accatcactt
    63361 acaaaaataa aaacctagct gaaatcctaa caccgcaaat gaaagaagac ttttattact
    63421 ttgaaggtaa cgcgcaagtg cttcgtgtag tttccaaact gcattatctt ttcgaccaat
    63481 acggcttaaa cctaacattt gccactttaa atgcggtcat caaataccca gtttcttcct
    63541 taaaagtaaa taaaaaacaa atcaaaagca aaaaactagg ctatttttat gccgatgaat
    63601 cactttttaa tgaaataaca acagcaacag aagcgcttga taaccgtcat ccgctcactt
    63661 atttactaga agtggcagac gacatcgcgt acctaaatgc cgacctagaa gacggcgtga
    63721 aaaaaggtat cgtcaacatc acgcaaatct taaaaggttt tgaagaagta gaagagcata
    63781 ataaagtaac tgccgcgtgc tacaacgaac ttaagaaaaa aagcgagcgc tacgaagggc
    63841 aagaagaaag tttcatcgta caacaatggc tcgcatcgaa cgtccgcggc caattaatca
    63901 atcgctcact cgaagtattt tacgagaact acgacgccat catggcaggc acattcaacg
    63961 actcacttat cgatgcttca agcgccgaac aactcgtaca aattttacaa agcctatcat
    64021 tcacgtacat ttaccaagat aaaggcattg ttgaatccga aatcgccggc aacgaaatca
    64081 tctccaaatt gctcgaaacg ttcatcccag ctgtgattta ctacgacagc gaaacaccag
    64141 aacgccaaac agccaaagat aaacgcctac taaccttgat ttccgacaac tacctaggct
    64201 gttaccgcaa aaacgcagaa ggcgaaagcg aaacaatgaa actgtacttg cgattacttc
    64261 tcgtaacaga cttcatttgc ggcatgaccg acagctacgc gaaagattta tatcaacgtt
    64321 tgaatggact tagctaatta actaaatttc aagtaacacc ttgacatccg aacgtcaagg
    64381 tgttactata ttcaaggtgc ctctactata aacagaggtc tgaaaataaa acagcgttgt
    64441 aggttgaact tacagccatt ttattttacc gaaaaaatga accacctgga tgtgtggaac
    64501 tactaaacaa ggaaggagga atttatccca tgcctacaat taaccaatta gtacgcaaac
    64561 ctcgtcaatc taaaattaaa aaatctacat cacctgcttt gaacaagggc ctaaacagtt
    64621 ttaaaagaga actaacagac gttaactctc cgcaaaaacg tggcgtatgt actcgtgttg
    64681 gtaccatgac tcctaaaaaa cctaactcgg cgcttcgtaa atatgcccgt gtacgtttga
    64741 gtaatggtat tgaagtaaca gcttacattc ctggtattgg tcacaactta caagaacata
    64801 gtgttgttct tattcgtggt ggacgtgtaa aagatttacc aggggtacgt tatcatatcg
    64861 ttcgtggagc gcttgataca gctggtgttg aaaatagagg acaaagccgt tctaaatacg
    64921 gtacgaaaaa acctaaaaaa taatacttat aaaatatgaa aggaggatat ccgatgcctc
    64981 gtaaaggtcc tgttgctaaa cgtgacgtgt taccagatcc gatttataat tcgaaactag
    65041 taactcgttt aattaataaa atgatggttg acggaaaacg tggaaagtct caagctatcc
    65101 tatattccgc attcgatatc attgcacaag aaactggtaa agatccgatg gaagtatttg
    65161 aacaagctat gaagaacatt atgcctcttc ttgaagttaa agctcgccgt gtaggtggtg
    65221 ctaactatca agtacctatc gaagtacgtg ctgaccgtcg ttctactctt ggtcttcgtt
    65281 ggttagtaaa ttatgctcgc cttcgtggag agaaaacaat ggaagtacgt gttgctcgcg
    65341 aaatcatgga tgctgccaat aatactggtg cttctgttaa gaaacgcgaa gatacacaca
    65401 aaatggctga tgctaacaga gcgttcgctc actatcgttg gtaaaaaaat cactgacaaa
    65461 ttccaggcgt attgcctgaa aaattgtttt atggaaggag aaatacaaca tggctagaga
    65521 gttctcctta gaaaagactc gtaatattgg tatcatggcc cacattgatg cgggtaaaac
    65581 taccactact gaacgtatcc ttttctatac agggcgtatt cacaaaattg gtgaaaccca
    65641 tgaaggtgct tctcaaatgg actggatgga gcaagagcaa gaacgtggta ttactatcac
    65701 ttctgctgcg acaacagctc aatggaaagg ctaccgagta aacattatcg atacaccagg
    65761 acacgtagac ttcacagttg aagttgaacg ttcgcttcgt gtacttgatg gtgctgttgc
    65821 ggttctagat gcacaatctg gtgtagaacc acaaacagaa acagtttggc gtcaagctac
    65881 tacttacggg gttcctcgtg tagtattcgt caacaaaatg gacaaaatcg gcgcagactt
    65941 cctatattct gtaggtactt tgcatgaacg tttggctgcc aacgcgcacc caatccaact
    66001 cccaatcggg gccgaagata catttgaagg tatcattgac ttaatcgaaa tgaacgcgtt
    66061 gtattacgaa gatgatttag gaaatgaccc tcatattaaa gaaattccag ctgatctgaa
    66121 agacttagca gacgaatacc gcggtaaatt agtggaagca gttgctgaac ttgacgaaga
    66181 gctaatgatg aaatacctag aaggcgaaga aattacaaaa gaagaactta aagctggtat
    66241 ccgtaaagga acacttaacg ttgagttcta tcctgtagtt tgtggtacag cattcaaaaa
    66301 caaaggtgtt caaccaatgt tagatgcagt acttgattac cttccagcac caacagatgt
    66361 tccagctatt aacggcgtat tgcctgatgg agaagaagct gctcgtcacg ctgatgattc
    66421 agaaccattc tcttccctag cattcaaagt tatgactgac ccttatgttg gacgcttaac
    66481 tttcttccgt gtttattccg gtactttgaa ttccggttca tatgtacaaa actcgactaa
    66541 aggtaaacgt gaacgtgttg gacgtatcct tcaaatgcac gctaatcacc gtgaagagat
    66601 ttcaatcgta tacgctggtg acatcgctgc tgccgtagga cttaaagata caactactgg
    66661 ggacacttta tgtgatgaaa aagaacaaat tatcttagaa tccatggaat tcccagaacc
    66721 agttatccaa gtcgctatcg aacctaaatc gaaagctgac caagataaaa tggggcaagc
    66781 tcttgcgaaa ctagcggaag aagatccaac tttccgtgct gaaactgacc aagaaactgg
    66841 ccaaactctt atctccggta tgggtgaact tcaccttgac atccttgttg accgtatgag
    66901 acgtgaattc cgcgttgaag ctaacgttgg tgatccacaa gtttcttatc gtgaaacatt
    66961 ccgtaaatct gctcaagttg aaggtaaatt cgtacgtcaa tccggtggac gtggacaata
    67021 tggtcacgtt tggattgaat tcggaccaaa cgaagaaggt aaaggatttg aatttgaaaa
    67081 tgcaatcgtt ggtggggttg ttccacgtga atacatccca gctgtacaag caggtcttga
    67141 aggcgcacta gataatggtg tacttgcagg ctacccactg attgacatca aagcaaaact
    67201 ttacgacgga tcttaccatg acgtcgattc caatgaaatg gccttcaaag tggctgcttc
    67261 aatggcatta cgtaatgctg ctaagaaatg tgatcctgta atccttgagc ctatgatggc
    67321 tgtagaggtt gttatcccag aagaatacct tggtgatatc atgggtaaca ttacttcccg
    67381 tcgtggtcgt gtagatggta tggaagctcg cggtaacgct caagttgttc gcgcatttgt
    67441 accacttgca aacatgtttg gttatgcaac tcaccttcgt tcaggtacgc aaggtcgtgg
    67501 tgtatacact atgcaatttg accactatga agaagttcct aaatctattg ctgaagaaat
    67561 cattaaagct aatggtggaa acaacaaaga agattaattg atttttttcg caacatcaag
    67621 tataacttta gttagaagta ttacttagtt taaatttaag ctaagtaaaa aataattatc
    67681 gaattatcga ggaggatatt ttaaaatggc aaaagaaaaa tttgaccgct ctaaacccca
    67741 tgttaacatt ggtactattg gacacgttga ccatggtaaa acaactttaa ctgctgcaat
    67801 tacaactgta cttgctaaaa aaggctatgc tgatgcacaa gcttatgacc aaattgatgg
    67861 tgctccggaa gaaagagaac gtggtatcac aatctctact gctcacgttg agtaccaaac
    67921 tgacagccgt cactatgcac acgttgactg cccaggacat gccgattacg ttaaaaacat
    67981 gatcactggt gctgcacaaa tggacggagc tatcttagta gtatctgctg ctgatggccc
    68041 aatgccacaa actcgtgaac atatcttact ttcacgtcaa gttggtgttc catacatcgt
    68101 tgtattcatg aacaaatgtg acatggttga cgatgaagag ttactagaat tagttgaaat
    68161 ggaaattcgt gatctattaa ctgaatatga attccctggc gatgacattc ctgtaatcaa
    68221 aggttcagct cttaaagcac ttcaaggtga agctgactgg gaagctaaaa ttgacgagtt
    68281 aatggaagct gtagattctt acattccaac tccagaacgt gatactgaca aaccattcat
    68341 gatgccagtt gaggatgtat tctcaatcac tggtcgtgga acagttgcaa ctggacgtgt
    68401 tgaacgtgga caagttaaag ttggtgacga agtagaagtt atcggtattg aagaagaaag
    68461 caaaaaagta gtagtaactg gagtagaaat gttccgtaaa ttactagact acgctgaagc
    68521 tggcgacaac attggcgcac ttctacgtgg tgttgctcgt gaagatatcc aacgtggtca
    68581 agtattagct aaaccaggtt cgattactcc acacactaac ttcaaagctg aaacttatgt
    68641 tttaactaaa gaagaaggtg gacgtcacac tccattcttc aacaactacc gcccacaatt
    68701 ctatttccgt actactgacg taactggtat tgttacactt ccagaaggta ctgaaatggt
    68761 aatgcctggt gataacattg agcttgcagt tgaactaatt gcaccaatcg ctatcgaaga
    68821 cggtactaaa ttctctatcc gtgaaggcgg acgtacagta ggcgctggcg ttgtttctaa
    68881 catcagcaaa taatacctga tacgattcaa accgacaaag tcatttggct ttgtcggttt
    68941 ttttgtgcct gaaataaaaa ttaacttgaa aaatatcaca ttttcgcata accttaaagt
    69001 agacatatct ttttaccttc tagaccgaaa tcaaggaggt aggccaagtg gtacaatttg
    69061 atgctcgaaa tatggcgttg ctcgaatcac tcgttgtggc gaatgtatat cttgcacccg
    69121 agaaattaca agaagaacta ggaatttcca aacgaacact tcaatatgat gtggaaaaaa
    69181 ttaataaaga attagataat ataggactcg atggtattca atctgttcgt ggacaagggt
    69241 attatttatt agaagatgaa aaatcgacaa ttaaagaaat ccttggaaat agggaagcga
    69301 gccacaaagt cttttcagca agtgagcgtc gcatccgtat tttatttttt ctgctcgtaa
    69361 cagatgcgcg agtaatcatt gatacgatta atgaatgcaa tgaagtcagt cgtaatacaa
    69421 gtttgcagga cattaaacaa ttaaaattag cgctaaaaca gtttaattta gaacttgcgt
    69481 atgaccgtaa aaatggcaat atggttctcg gtgatgagcg cagtattcgc caatttttta
    69541 ttcactattg tatgaataac gaagaaatcg caaccgcaga ccagttgctc gatttaatga
    69601 aaattaatcc gatgataaaa aatcaggagt tatttcccaa attagatacg attttcgaaa
    69661 ttttagcagt aacggagaaa aaaatcggaa ttcgttatac tgacgaggtc cttgagcgca
    69721 ttggtattat gattttcttc tttaaagaac gaatgaagcg taattgctat ttaaatgaac
    69781 aagaagagca tgaagtagaa tcttttgaga ttgcgcagga aatttatcag caattgcagc
    69841 aaagtgagaa ttttaaaatc aatcatgcgg aaatcactta tttaggtaaa cttttgcttg
    69901 gggcgagtcg tttgaatgat gatgcggctg ctgaaggaaa attagatctc atcgttgaaa
    69961 aaatcatcgc cgaatttgaa cgtcttgctt gcgtgaattt tgaagaccat cgcaatttga
    70021 aaaaagattt attgcttcat ttacaaccag cctactatcg gcttaaattc caaattgagt
    70081 ggattaaccc gctaaggaca gacattaaac aaagttacag tgatgtgtac gagattacga
    70141 aaaaatcact tgaaccgcta gaagatttac ttggtgaaac aattccagag gatgaaatag
    70201 cgtacgtaac aatcttgttc ggtggctatc tttcacgcaa aaataatact ttagttgaac
    70261 gaaaaaaact cttaatcgtt tgctccaaag gtgtcggaac gtcgcggatg attgaacggc
    70321 aattatcgca attacttggt gagcgagtag agatattaga accaatttcc atccgtgaat
    70381 ttgaaaaagg gttatacgca ccagacttta ttgtgtcgac tttgccaatt atggaaccaa
    70441 aagcaccagt ttttatcgtt agtccaattt tgacagaagc gcagaaacaa caactgatga
    70501 aggcgattgc cccgcacatt ttgcaaaagg actcggatgc gcgcatgttg tcttctgtgc
    70561 ttgatgtagt agatcaatat gccaaagtgg aagaccgcga gaaattggcg gcaaaactga
    70621 aatcggtatt gttccaagtg caatcagaca gccaactaga aaaatctcca acactcgaag
    70681 aacttttacc gaaagaacga attactttta aagaaagtgt ggcggactgg cgtgaggcta
    70741 tcctagttgc ctcgaaatcg ctgcaacaag aaggctacat ttcgagaaat tatcagcatg
    70801 cgatgattga aaatattgag aaactcggac catacatcgt tattgcgcca gggattgcac
    70861 tgccacatgc gtctgtggat gacggggcat accgagtcgg aatgagctta ctgcgcttaa
    70921 atcagccagt atcattttca agtaaagcga aagatcaagt gaagttaatt attgtgctcg
    70981 cttccattga ctcctacaca catattaatg cgctgagcca actcactaat ttaatcatga
    71041 aacatcactt gctagagcag attgaacaag cgacatcagc agcggaaatt gccgcaatgt
    71101 taacgataca ataagcaaga aagccagtgg ggcaccaaga tgccgcgctg gctttttgta
    71161 tgctcgctaa caacaaaatg taacagtcta ttttttgcac tttcgaaaag aaaggaattg
    71221 ggctttttta aacagttgcg ctacagctat aataagagtg taagttattg atagcgctat
    71281 caattagtta gaagggatga agagatatgt cttttttgga taaagagctt gtgaatctgc
    71341 atggatcagc taagaatgct gacgaagcta tcgtgcaagc aggagaatta ttagttaatg
    71401 caggttatgt gagcgagcag tacgtagaaa aaatggtgga atcttatcat gaaaatggtg
    71461 cgtactttgt cattgcacct caaatagcca ttccgcacgc aagaccaact gatggtgtgg
    71521 aaaactctgc agtatcacta gtcgtactaa aagaaggcgt gaatttcgga cacgccgcga
    71581 atgatcccgt acgattagta ttcggtcttg cagcaacttc aagtgaggca catttgaaag
    71641 tcattcaaaa aatcgtctcc ttgcttagta acaacgataa tattgaaaaa ttgattcatt
    71701 cagaagatta ccaagcaatt ggagaattag tggagggata acgatgaaaa ttttagcagt
    71761 atgtggactt gggcaaggaa caagcttaat tttacgaatg aatgtagaga cagttttacg
    71821 cgacatggga gtagatgcag acgtggagca cattgatgta tcagctgcgc gctcgatgaa
    71881 tgtggatatt attgtaacga gccaagagtt agcagaaaca cttggaacag atacaagcgc
    71941 caaagtagtc atcgtcaaca actattttga caacgcagaa attaaaacgg cattatctga
    72001 agcaattaat agttaaataa gacaaaaaaa ggtgggaaaa aaatggagat tattacgtgg
    72061 attgccaata acttttttgg aaccccagcc atacttttag gttttatcgt acttctcggg
    72121 ttacttttac agaagaaaaa tttaagccaa gtgattagcg gaacgttcaa agccattatt
    72181 ggattcttaa ttattaacgc tggtgcggct gttattactg gttcccttgg gatttttgaa
    72241 ccaatgtgga aagaagtatt cggacttgaa acaccgccac ttgcaggctt tttaggacaa
    72301 gaagccttta atgcaaaatt tggtagtgcg gtaacacttg cgatgacact cggattttta
    72361 gtcaacgtat tattagcacg atttacacca tttaagtaca tttatttaac tggtcatatg
    72421 atgttctgga caacgacgat ttttgcagga atcactgtgc aagctgtcgg cggggatatt
    72481 ccgttctggg gtcttgtact cttcttagca gtaattatgg gtctttactg gacattacaa
    72541 ccagcgatta cacaaccatt cttacgtaaa attactggaa atgacaacgt cgcgttagga
    72601 catacttcat ccagtgtagc gattctatcc gctttgctag ggaaagtatt tgggaataag
    72661 aaaaacgatg cagaacatat taatttaccg aaaaaattag agttcctacg tgactctaac
    72721 gttattacag ctcttacaat ggggattctg ttcgtagttg gtgcagtgat tctgatggtg
    72781 aagaaaacac cgggagcaga aaaattaatc gcagaagctg gaaatcaaag cttcatcgta
    72841 tactccatcg ttcagtcctt tacgtttgcc gctggtatcg ccatcgttct tgtaggtgtg
    72901 cggatgttta tcggtgaaat cgtaccggcc ttcaatggta ttgcaacaaa acttgtaccg
    72961 ggtgcgaaac ctgcactaga tgcgccaatc gtttatccat atgcaccaaa ctccgtaatt
    73021 atcggtttcg taggtgcgtt cattggagcg attatctggt tagtagtact tggaaataca
    73081 gttggctacg tgtttgtgcc aacaatgatc gttcttttct tccacggggc agttgctggt
    73141 gtattcggta actcaactgg tggggtgaga ggagccttga taggtggatt tttaacggct
    73201 acggttgttg cttggggaca atatattatg gttaccttct ttatcaatac gactgttcca
    73261 gatacagcaa tgtgggcagc cgactcagat atgtttatcc tcggaccaat tgtcagcatg
    73321 ttagcgaagt tattctttta agtaaaatct aaacctcttc cttgtctagc attcaagagg
    73381 aagaggtttt ttgaaaggaa gttttaaaaa atgagtttta ttcgtacttt ttatggagat
    73441 attgcccctg aacaactggg cttcacttat tcacacgagc acatcgtttg tgtaccagct
    73501 tactggcaag agcgagatgc cgatgattta cttttggatg ataaagaaaa atcacaactt
    73561 gatgtacaag atttcgccga tttaggaggc aaaacaattg tcgatgcaac cgcggttgat
    73621 tacggcagac gtgtgctcga tgtggcgcaa atttccaaag aaacaggcat ccaaatcgtt
    73681 ggaacagctg gctttaacaa aagtttctta tgggacggga agattaaacc agaactgaaa
    73741 ccaatcatcg gggattttga aacctactat gaatggattg aaaatactac tacagacaaa
    73801 ctaacggaat tcgttgtaaa tgaagtcgaa aatgggcttg aaggaacgcc gtataaggct
    73861 ggtcaggtga aatttggcac tggctacaat atgattacac ctttagaaga aaagacaata
    73921 cgtgcggttg caagagcaca tcacgagaca aaagcaccaa ttcattctca cacagaagcg
    73981 ggaacgatgg ctttagaaca aatcgagatt ttaaaacaag aaaatatccc gttagaatac
    74041 ctttctattg gtcatatgga ccgcaaccta gatccgtatt atcacaagca agttgccaaa
    74101 acaggcgcat tcatgtcatt tgatggcatc gcaaaaatca aatacgcacc agaaagcgct
    74161 cggattgcag cgattctata tctagtttcg gaaggctttg aagatcaaat tttagttagt
    74221 ggtgatacag cacgcaaaac ttattataaa cattatggtc acggaccagg acttgaatat
    74281 atcgccaaaa aatgggtgcc acgctttatt gatgaagcaa acgaaaaagg ctttgacgga
    74341 gaaaaattag ttaaaaaatt cttcgtggat aacccagcaa gatgttttac ttttaaaaaa
    74401 taggaggcga aatctgtgtt atatgcagat gaaaattcat ttgatattgg cgcgaaaatc
    74461 acgaaaacaa aaccagtcct tttgccaata ggagcagtcg aagcgcatgg gccgcatttg
    74521 ccactaggga cagacaatat tttagcgtca gaatattcag cgaaaatagc ggcggaaacg
    74581 agcggattcg tgcttccggt tttgccatac ggccaagttt ggagtttgca agatttccct
    74641 ggaagtttaa cactatcaaa tgaaacggta acgaaagtag ttgtagagat tggtgaaagt
    74701 ctatataaac aaggattccg tctgtttgtc ccagtgagtg gacatcttgg caatatggct
    74761 gcgctaaaag atgcagcgcg cgaactatat gcaaaatatc ctgatatggt tatcttgcac
    74821 attttttacc cgaatatcca aaaattagca atggacgtgc gcgaaggaaa cgctaaccat
    74881 catacgtata ttcatgcctg tgaaatcgaa acatctctca tgctctactt gtccccagaa
    74941 aatgccgata tgagccgcgc catagatgat ccgccaattt taccaatcga tgcggatttc
    75001 accccaacac cgtggcaaaa cttcacgaag acagcggttc tgggagaagc aactttggca
    75061 acagcagaaa aaggcgaata cttgattgaa aagacgttaa aaacatgtgt ggagttgata
    75121 aaacttgaac aagaaaaaat tcgaaaatct accgaaatgg aataattttg cgctatttaa
    75181 ttttttagcg aaagataagg aaaatagcct ggaagtcatg gaggcggcgc gcggttttgc
    75241 cgttccggga atcgttgcaa cgaactacga aacagcagaa gaagccgcaa atgtggtgaa
    75301 agaattacaa acaacagccc ccgtcattag tgttggtctt ggtggcggtg gagactggca
    75361 aaactggcgt gatgtgcttc atattgctcg tctggctccg aacagtcata ttaaccagcc
    75421 aatcgaaacc gcgggattaa caaatgactt acttccggaa acatacacta atgcacttgt
    75481 tcgtccaacc gggaaaatcg gcatcgtcaa actatcttcc ggagacgaaa ttaccgctga
    75541 agaagctgtc gattattgtc tatccgccaa catcccgtcc atcaaattta tgagcattga
    75601 aggcacgaaa tatttagatg aactagttta cttaacaaaa attgcggccg ataaaggcat
    75661 ttacggtatt gagccagcgg gaggaattgg agctgacaat attcttgaaa taacaaccgc
    75721 catcaagtcc accggaattc ccttttatat gccgcatatt tttggaaaaa caattgacaa
    75781 agcaactggc cgaacgaaac cggaagaaat cgagaaaatt tttgcagctt tggaggggaa
    75841 ttaaatgatt aataactata tcgatattac agttcgttta ttagaaaaca ttctcgataa
    75901 tgaagctgat tatgtaaaag aagcaggagc gaaggtagcc gaatctattg aaaacgacgg
    75961 ggtaatccat ttatttggtt gcggtcactc gcatatttta acagaggaag tattttaccg
    76021 cgcaggtgga ctggctgcga ttcatccgat tttgcatgaa ccacttatgc ttcacgaagg
    76081 agctgcggcg tcatctgtac tggaacgaaa aaatgattat gcgaaaacat ttatggcaga
    76141 ggaagatatc cgtcctggcg atatcatgat tgtgctatcg acgtccggac gaaaccctgt
    76201 accaattgat gttgctgaaa ttgcccgtga aaaaggtgca tttgtcatcg tcattacttc
    76261 gctccaatac tccgctagcc aaaaatcccg ccacacatcc ggaaaacgtt tatctgatac
    76321 aggggacatt gtaattgata acggtgctgt caaaggtgat gccgtcctaa aatcggcaaa
    76381 cttcgatatc gcatttgccc caacatcgac ggtaacgggc gcagtcatct tgcaatctat
    76441 ttttgcagaa gcaatcgaaa caatggtaaa cgacaacttc acaccgccag tatttattag
    76501 tggaaatgtc gaaaatgccg atgcacataa tcaagcactt gttgataaat ataatgagcg
    76561 aattccgctt cttggaatga atttataaga aagaaaagtc taggttagca cctagacttt
    76621 tttactatgt tagagtattt ctatagattg cgatataatt aaactatata aaaatgataa
    76681 aggagtgcgg ccgatggatt cagcatatgt ttttgatagc gaacaagcaa cgaaattatt
    76741 aatgaagaac tatgaattag taaaaacgag tggcgttagt
//
LOCUS       DASDYO010000003        63341 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.003, whole genome shotgun sequence.
ACCESSION   DASDYO010000003 DASDYO010000000
VERSION     DASDYO010000003.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 63341)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 63341)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..63341
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.003"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..468)
                     /locus_tag="U0290_000159"
     CDS             complement(<1..468)
                     /locus_tag="U0290_000159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2812 domain-containing protein"
                     /protein_id="HEM2300228.1"
                     /translation="MEKKVVKFFTVDNMEKEEAYLNEMAQNGWFFQKYKSFRYHFKQG
                     EPAKYSYAIDFKENEGDEDAYKTLFEDAGWETVFSYPVLNGNWMYFRKAVAPGETEEA
                     IFTDETSLIQLYKNIRKRWTIFGAIVSLFLLIELLIVFQMENNIGITTFIFIIF"
     gene            complement(471..782)
                     /locus_tag="U0290_000160"
     CDS             complement(471..782)
                     /locus_tag="U0290_000160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator"
                     /protein_id="HEM2300229.1"
                     /translation="MNEKLRKAYLPMTETAFYILLSLVKPRHGYAIIENVAKMTDDRI
                     KLGPGTIYGSLSKMNKDNLIQIIQEESNRKIYQITEIGTDILQLEKARIEELYRNSRE
                     V"
     gene            complement(813..1343)
                     /locus_tag="U0290_000161"
     CDS             complement(813..1343)
                     /locus_tag="U0290_000161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2300230.1"
                     /translation="MKIRIIGSVGSGKTTLAKKLSEWQQIDYFETDRIVWKREETEVR
                     RTDNEKIAVLNKILQQENWIIEGVHLEAWVDESINQADVVIFLDLPKKQIRSQIIKRQ
                     IKQLIRLEAAHYPIRFNMLKKMFYWDDLFDQRTKPLIARKMAQNPTKWLIIKEKTVFQ
                     EIKNGVLQIISSRDIL"
     gene            1432..1881
                     /locus_tag="U0290_000162"
     CDS             1432..1881
                     /locus_tag="U0290_000162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEM2300231.1"
                     /translation="MIILFIVSGLLAGMVLPVQTAINTRLSTYTKSPFLASWVSFMVG
                     TTVLLIVCLFTQKSWPISSEMIASNPWYIWVGGGTLGVIFLTANILLLPRLGSALLVM
                     ITVCGQMIMAIIIDNFGLFQVPMHEINIERLLGVILMFGGIYLMQRF"
     gene            1896..2363
                     /locus_tag="U0290_000163"
     CDS             1896..2363
                     /locus_tag="U0290_000163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEM2300232.1"
                     /translation="MTKRSSKSLLLFMAMGLVSGLLSPIQTSINSQLRLTVGSPFVAS
                     FISFLVGTTLLTLVCLIVERRLTFQLKGVGRIPWWVFTGGALGVLFVTSNILLLPLLG
                     SAMTVVLALCGQMIIALIIDHFGFFGVIPHPINRYRMIGVLLMLVGVFLIQRF"
     gene            complement(2408..2974)
                     /locus_tag="U0290_000164"
     CDS             complement(2408..2974)
                     /locus_tag="U0290_000164"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEM2300233.1"
                     /translation="MRIYTKTGDKGMTRIIGGSKVSKDNIRIDAYGTLDELNSLIGYT
                     ITTLGAEPEIQAELEQIQQQLFDAGGDLATEEGKRAYKLTSEPVAWLEDRIDIYADEP
                     PEIEKFILPGGTQAASLLHMARTVTRRAEREIVGMLKIASSNEEVLKYVNRLSDYFFA
                     VARVVNYRAGETDIFYKNSELVFRNKKK"
     gene            complement(2938..4473)
                     /locus_tag="U0290_000165"
     CDS             complement(2938..4473)
                     /locus_tag="U0290_000165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyric acid synthase"
                     /protein_id="HEM2300234.1"
                     /translation="MVKQIMIQGTASDAGKSVLVAGLCRLFKNKGKRVVPFKSQNMSL
                     NSFITATGDEMGRAQVFQAEAAGVFPDVRMNPVLLKPTNDRQSQVVFMGAILDNMDAV
                     TYHDFKQTLIPKIQAVYQSLADENDIIVLEGAGSPAEINLNDRDIVNMGMAKMVDAPV
                     VLVADIDKGGVFASIYGTIMLLNEEERARIKGVIINKFRGDVALLQPGIDMIEELTNV
                     PVIGVIPYANLQLEEEDSVSLSGKNYVPDSNALLDIAIICLPRISNFTDFHILEIQPD
                     ISVRYIRNIADFGNPDLVIIPGSKNTLEDMAFLEESGLKNAIQNYAKNAGKVIGICGG
                     YQMLGKKMLDPNQVESKQLEIAGLGLLDTETIFLDQKRTTQITGVTHSGEAVEGYEIH
                     MGETKRGESTSPFCEIKAVNGNEETHQDGAISVNKNIIGTYIHGIFDNDVFLGNLFDE
                     LLTGKNKSVYPHEIINLKEHKEQEYDKLAALLEANIQMDQLEKIMKGEKICVSTQKPA
                     IKE"
     gene            complement(4473..5279)
                     /locus_tag="U0290_000166"
     CDS             complement(4473..5279)
                     /locus_tag="U0290_000166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2300235.1"
                     /translation="MLKTEHISFQYEDGKQALTDVSIDLEKGNIIGLIGANGSGKSTL
                     FMQLLGINKPSDGTVYFEGKPLAYTKKALFALRKKVSIVFQDPDQQIFYSNVRDDVAF
                     ALRNLGVSETEVEARVTKVLDIVGAKDFQHKPVQYLSYGQKKRVAIAGALVLDTDWLL
                     LDEPTAGLDPIGKKIMMEIIERLASQGKKILISSHDIDLIYEICDYVYMLKDGSVLTD
                     GETSNVFLEKSNVEQAGLVQPWLIKLHQQAGYPLFKKEADFFAHTGKVTN"
     gene            complement(5292..5969)
                     /locus_tag="U0290_000167"
     CDS             complement(5292..5969)
                     /locus_tag="U0290_000167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     transmembrane protein"
                     /protein_id="HEM2300236.1"
                     /translation="MLTIDKYAYQNRWIAFSPSLKALFYVAILILALTGPVLIQAILF
                     FCMVPLTLYVVKIHFKQYLKWLLLPFSFLLFSLLSILISISKDPSSFLASISIGSLYL
                     GVSDVTITTATQVFFRSIACLAATYFFVLTVPVVQLTKVMKRIFIPKVLIELTILIYR
                     FIFIFLEEAAAIRKAQSLRFGYHGIKNSYRSFGMLVNTLFNRVMKRYNEMVITLDVKL
                     YQGEFHI"
     gene            complement(5956..6252)
                     /locus_tag="U0290_000168"
     CDS             complement(5956..6252)
                     /locus_tag="U0290_000168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM2300237.1"
                     /translation="MKKININVILILLVVLLMVSPFFFNKTGEYGGSDGEAEAEITKI
                     DPSYEPWFEPLYEPKSGEIESLLFTLQGCIGTGIIAYVIGVSRGKRKAENDVNH"
     gene            complement(6249..6899)
                     /locus_tag="U0290_000169"
     CDS             complement(6249..6899)
                     /locus_tag="U0290_000169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464729.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter permease"
                     /protein_id="HEM2300238.1"
                     /translation="MHIMEGFLPVKWAVFWFIVFIPFLVLGLIRIRKLIALDKNNKLL
                     LALCAAFIFVLSALKIPSVTGSCSHPTGVGLATVMFGPLVVSVLGVIVLLFQALLLAH
                     GGITTLGANAMSMAVIGPMVGFVVYKLARKLNCNKSVSIFLCAMTADLATYLTTSVQL
                     GVVFPDPASGMMASILKFMAIFCVTQVPIAIAEGLLTVVMYNLISKNLPEKVAQLR"
     gene            complement(6980..7690)
                     /locus_tag="U0290_000170"
     CDS             complement(6980..7690)
                     /locus_tag="U0290_000170"
                     /EC_number="2.1.1.151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-factor II C(20)-methyltransferase"
                     /protein_id="HEM2300239.1"
                     /translation="MAKFYGIGTGPGDSKLVTMEAAERLGNLEILYTPQPKKGGESLA
                     KKIVSPYLKDTLIIKERHFPMSYNKEEKMLAWKEIAEEIKADVQNGHDVGFITLGDPM
                     VYSTYSYLLELLKGEIETVTLAGISSFSNIASKIELPLVMDEESFAVIPVTAGAEKIE
                     QALTLFDTVVLMKAASNLPLLTTLLKKLNLLDAAVVVSDVAMATEKITYGMNEINPDE
                     KMSYFTTIIVKKRREQYK"
     gene            complement(7683..8468)
                     /locus_tag="U0290_000171"
     CDS             complement(7683..8468)
                     /locus_tag="U0290_000171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sirohydrochlorin cobaltochelatase"
                     /protein_id="HEM2300240.1"
                     /translation="MKKAILVVSFGTSYPETREKTIEACEKKVAQEFPDYNVFRAFTS
                     NKIIKKLKTRDNMHINTPSQALNQLKELGYKEVIIQSLHIISGGEFEKITAQVEKFKP
                     DFDSIIVSQPLLDSMEDYEKAIEAIRHQMPPLKEQEALILMGHGSKHRAFSAYACLDH
                     MLLNEPIYLCAVESYPGLDQVIERLQQANIKKAHLMPFMLVAGDHATNDMASDDEDSW
                     KSTLEQAGIQTECHLQGLGENPLIQAQFIDHIHTAIERVKARG"
     gene            complement(8465..9946)
                     /gene="cobA"
                     /locus_tag="U0290_000172"
     CDS             complement(8465..9946)
                     /gene="cobA"
                     /locus_tag="U0290_000172"
                     /EC_number="2.1.1.107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III C-methyltransferase"
                     /protein_id="HEM2300241.1"
                     /translation="MGKVMLIGAGPGDAQLLTVKGLAALQKADVIVYDRLVEPAMLQE
                     RKASCKLIYVGKEPLHHPIPQEEIEQILVKEAATNELVVRLKAGDPYVFGRGGEEGET
                     LYKAGIPFEVIPGITSAIGGLAYAGIPVTHRNFASSFHVITGHLKKGRDPLDWEALAR
                     LEGTLVFLMGMTNLPNICANLLENGRKAETGVAIVQWASRGKQLTVTGNLQNIEQKVA
                     ESGISSPALIVVGDVVSLRPQLNFFEEMPLFHTKVLLPRARAGKSMLAEQIRDLGGEV
                     TMYPNIQVVDVVPTKTKEELREVSGLLFTSKEAVERFFDYLAQLDLDIRSLKNTHLTA
                     IGKQTKEAFSEKGIIPDSFIKRRSTELILEHLPRLQKNVSNLIIGSIVDTAEVNAILA
                     EVEAMEMMPLYDMRPVTERPFDLASFEQVCFSSSRSVQNLLDVLTTEEKAILQTKTIL
                     SIGRFTSATLASFGINNFIEAESATPESLIELIQKTKLEGVPQ"
     gene            complement(9946..10698)
                     /gene="cobK"
                     /locus_tag="U0290_000173"
     CDS             complement(9946..10698)
                     /gene="cobK"
                     /locus_tag="U0290_000173"
                     /EC_number="1.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-6A reductase"
                     /protein_id="HEM2300242.1"
                     /translation="MIFVLGGTSDSLAISDWLTEKKQAFILSVATDYGETLAKQHAEN
                     VFCGRLSKEEMLLKWHATKVHLVIDATHPFATIVSETAMEACKEADIPYIRFERTSEQ
                     TDNTYLVADIEEACAVAMKLGKRIFLTTGSKNLPEFVAGLNNRHIIARILPVSDVIRS
                     AEELGLVADQIIGMKGPFTKEANRTQLEMTGADVLITKESGKQGGFQEKLAAAAELNI
                     PVIVIRRKKLNYPIEINHLSELPEILTQLEVY"
     gene            complement(10695..11420)
                     /gene="cobJ"
                     /locus_tag="U0290_000174"
     CDS             complement(10695..11420)
                     /gene="cobJ"
                     /locus_tag="U0290_000174"
                     /EC_number="2.1.1.131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="precorrin-3B C(17)-methyltransferase"
                     /protein_id="HEM2300243.1"
                     /translation="MIYVIGIGPGDKRLMTGEALQAIEDAEVIVGYVTYIKLIKELIK
                     DKEVVKTGMRREIDRCQEAVDIALTGKKVAVVSSGDAGIYGMAGLVLELAEKSNPDLE
                     VKVIPGITASIGAAAVLGAPIMHDFCHISLSDLMTPWEVIEKRLTHAAMADFVVCFYN
                     PRSKGRANHLANAFQKMMEHKSGDTVVGIVKDVGRKEERKIITTMRDIDYELVDMTTM
                     VIVGNKETYVKNGKMITPRGYTL"
     gene            complement(11417..12448)
                     /gene="cbiG"
                     /locus_tag="U0290_000175"
     CDS             complement(11417..12448)
                     /gene="cbiG"
                     /locus_tag="U0290_000175"
                     /EC_number="3.7.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin 5A hydrolase"
                     /protein_id="HEM2300244.1"
                     /translation="MNTDKLAIIAVTERGRDLAITLTKTVAATIFVPGKHCNEQTNSL
                     TPDFGTAMREIFTKYQALICIMATGIAVRTLAPAIEDKLSDPAVLVMDEHGKFIISLL
                     SGHVGGANELTEQIAAITGGAAVITTATDRANVAAIDNIAKQLNGYLPDFKATTKRIN
                     GLLAAGKEVGLYIDEPLDIDTRGFTMEEVSPQVYISTKYKLQVATHERIQLVPKQFIL
                     GVGCRKGVSAETIAAAFTHFCEQENIHPRAFREIHSITLKAEEPAILHLAEKWRVPFI
                     VHPAEELQTVAGKYPTSAFVQKTVQVGNVALSSADIGSNGNVVTSRFAENGVTFAAGK
                     LTKNSEVAK"
     gene            complement(12435..13184)
                     /locus_tag="U0290_000176"
     CDS             complement(12435..13184)
                     /locus_tag="U0290_000176"
                     /EC_number="2.1.1.271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-4 methyltransferase"
                     /protein_id="HEM2300245.1"
                     /translation="MAEVHFVGAGPGDKELITLKGYQLLKEADVVIYAGSLVNPELLE
                     YCKPDCEIHNSASMNLIEIIDCMEAGVTAGKEVVRLQTGDFSIYGSIREQVEEMKKRS
                     IPFTCTPGVSSFLGAASSFGVEYTVPEVSQSVIITRMAGRTPVPSRESLRSYAAHQTS
                     MVIFLSVQGIRKVVSELIKGGYKPETPAAVIYKATWAEEKKVTGTLEDIAEKVTEAGI
                     TKTALIMVGDFLGEEFYYSKLYDKDFKHEYR"
     gene            complement(13190..13759)
                     /locus_tag="U0290_000177"
     CDS             complement(13190..13759)
                     /locus_tag="U0290_000177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="decarboxylating cobalt-precorrin-6B
                     (C(15))-methyltransferase"
                     /protein_id="HEM2300246.1"
                     /translation="MKDEVFIRGKVPMTKAEVRAASIDLLNLDDTSKKLLDVGAGTGS
                     VGLQVACNFPKIQVTAIERNPDAVDLIKQNQAKFGLENVTVIEAYAPIELPEKETFDA
                     IFIGGSGGNLTDIIDWSLAHLNPGGGLVLNFILLENALTAMNHLEKLTVSELTMKQIQ
                     VSSWHKLGAGHYFEPQNPTVIIGCKKLEE"
     gene            complement(13749..14345)
                     /locus_tag="U0290_000178"
     CDS             complement(13749..14345)
                     /locus_tag="U0290_000178"
                     /EC_number="2.1.1.289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-7 (C(5))-methyltransferase"
                     /protein_id="HEM2300247.1"
                     /translation="MITVVGIGPGDTNLVINEAKQVLSTAEIVYGSTRQLQEITELTT
                     ATPMLLPKKLADLKNIPHQNKNVVILASGDPLLYGIGNWALANFSEDVRIVPGISAIQ
                     MMFHRIQLPMNDCFITSSHGKTPNFDFLLQHEKVAMVTDTIIGPYEIAAEILQRGLKK
                     ILFIGENLSSKEERIHKLKPEQVAKKYDMNVVVIVDEG"
     gene            complement(14342..15463)
                     /locus_tag="U0290_000179"
     CDS             complement(14342..15463)
                     /locus_tag="U0290_000179"
                     /EC_number="2.1.1.195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-5B (C(1))-methyltransferase"
                     /protein_id="HEM2300248.1"
                     /translation="MEDFIYYNGKKYRKGYTTGTCAAAAAKACVEMILTQEEVSAVQV
                     TTTGGTILEIPVAYQKFSKDKATAAVQKDGGDDIDATHGMWIFVDVDLTDNAEVVLDG
                     GVGIGRATQKGISVAVGEAAINPAPRKNILATVRESLGENRGAKILVYAPEGEERAKR
                     TMNSNLGIIGGISILGTTGIVTPMSDEGWKKSLSMELEMKRNQGLDQIILVPGNYGDD
                     FVQNTLGFSSGNIVSMSNFVGYMLKETQRLAFKKVLMVGHFGKLVKVSAGIFTTYSKD
                     ADARAEILVANLALLGAPLSLLQAVEKCNTTEAAGELIEEAGFTQVYDVIVQKIKARS
                     ERFLKFTKPSVEVDVVTFSTERGLLAATKDIDVLREEWR"
     gene            complement(15479..16111)
                     /locus_tag="U0290_000180"
     CDS             complement(15479..16111)
                     /locus_tag="U0290_000180"
                     /EC_number="5.4.99.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalt-precorrin-8 methylmutase"
                     /protein_id="HEM2300249.1"
                     /translation="MNYIKNPAKIEEKSFEIIQQIINDIRPDYTFQNKLEEAIIKRAI
                     HTTADFDYLDSLVFQQDAIAKIIHVLQNKGTIFTDTNMALSGINKRLLDELGCKYHCY
                     VSDPETMEIAKQHGITRSMAGIKLASLKDGPKLFVLGNAPTAVYKIIEMTESGELQAD
                     AVVAVPVGFVGAAECKEEILETDIPAIVARGRKGGSNLAAAIINAILITM"
     gene            complement(16124..17071)
                     /locus_tag="U0290_000181"
     CDS             complement(16124..17071)
                     /locus_tag="U0290_000181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin biosynthesis protein"
                     /protein_id="HEM2300250.1"
                     /translation="MILLFYTSSFILDCLLGDPYSWPHPIKAIGNLIKWLTIILRKIF
                     HGKSLYFAGGLLFVLTVGMTGVVSWFILFLSAKIAYWLYIAVFVYLGYTTLAMTCLAK
                     EARKIQRTLADGDLAAARVQVGMIVGRDTDKLTAEEISKATIETVAENTADGVIAPLF
                     YLFIGGPVLALMYKAVNTLDSMVGYKNEKYRAIGFVSAKMDDIANFIPARLAWFFLVI
                     ASFILRYDGRASWQIGLRDRKNHTSPNCAYPEGAVAGALGITLGGTHEYFGETVIKPT
                     IGSGNKPVSEKEISQTIHLLYTASTIAFIIFASIYLLLF"
     gene            complement(17068..18426)
                     /locus_tag="U0290_000182"
     CDS             complement(17068..18426)
                     /locus_tag="U0290_000182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobyrinate a,c-diamide synthase"
                     /protein_id="HEM2300251.1"
                     /translation="MNKILIAAASSGTGKTTITLGIMHALKKRGLRVQPFKVGPDYID
                     TNYHQAITGVASINLDSFLIDDDAMLATLFQKHGESADISVIEGVMGLFDGLGIDRDN
                     SSTSFIAKCTKTPVILVVDGKAISTSAAAIVDGFNRFDPELTIAGVIINRVASENHFS
                     LIKGAIERYTDVPVLGYLPKNAAVALPERHLGLVPKEEMTELETKWELLGDLIAEHVD
                     LDRLLAISKTGAKLTVHPPEIQVPDFSGVRVAYALDAAFHFYYQDNLDFIRSTGATLI
                     PFSPLEEREVPDADFIYIGGGFPEVFAEQLAKNKSMRESILAAHEQGKPIYAECGGLM
                     YLGSSLEMEAESYEMVGVFDGVSKMTTRLRKFGYCIAEPLEDTLLGKKGTAIRGHEFH
                     HSVFETTEPTRMKLTKKRDGKIVKEWHGGYQKGNTFASYLHIHFYQNLLIITHMFGAI
                     ER"
     regulatory      complement(18588..18765)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            complement(18759..19253)
                     /locus_tag="U0290_000183"
     CDS             complement(18759..19253)
                     /locus_tag="U0290_000183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM2300252.1"
                     /translation="MKIQKLVLCAMLIAMCVIGANIKLMGSVAFDAAPAFIGTLLLGP
                     MYGAVLGIFGHLTSALLAGFPLTLPIHLIVAGMMGVTMIAYGFTRQKLAEKNQLVAVS
                     VSSIVAFVFNCPLSLLALYPLMHQAVFVLFPVLAIGSICNIFVAEVVYQVLPERWKRR
                     IAGY"
     gene            19567..20118
                     /locus_tag="U0290_000184"
     CDS             19567..20118
                     /locus_tag="U0290_000184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2300253.1"
                     /translation="MEKEKVVNIQPLMDSQVESQFTQQIQEDFNKKNPDHSALLHSLE
                     TVEVLDVLSDYYSAHEKQKQPRKETTSVNKTGKEHKEIKQAIRYIKKNIHRSITLEEV
                     ANYVYLSPFYLSKLFKNELNINFINYVNEQKMLYAKEQLEKSDWAVHTIAKNLGFSRA
                     SYFCKVFKKEFDMTPKEYRDSLK"
     gene            complement(20160..20603)
                     /locus_tag="U0290_000185"
     CDS             complement(20160..20603)
                     /locus_tag="U0290_000185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF861 domain-containing protein"
                     /protein_id="HEM2300254.1"
                     /translation="MADISKELIEQLVKQVVLEKMGQSSKHVDPSGILSVKLPVVKVS
                     EEDRLDTGNPSDVVYTKDLVTLEESKRLGFGLMEMKDTTFDWFLDYDEVDYIIEGRLD
                     VVIDGRTVSAGPGEIIFIPKGSQIKFSVTGEARFIYVTYPADWQS"
     gene            complement(20596..21717)
                     /gene="eutH"
                     /locus_tag="U0290_000186"
     CDS             complement(20596..21717)
                     /gene="eutH"
                     /locus_tag="U0290_000186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutH"
                     /protein_id="HEM2300255.1"
                     /translation="MSINEIIIYLMVIFMILGAIDKIIGNKFGLGAQFEEGIMAMGSL
                     TLAMVGIITLAPVLAKILSPIVVPIYTALGADPAMFATTLLANDMGGFALAQELALTP
                     DAGLFAGAILGSMMGPTIVFTIPVALGIIKKEDHKYLATGVLSGIITIPIGCLIGGLV
                     AGFSPIMIFKNLVPIILVAALIMLGLWFKPEGMIKGFTIFGKGVVIVATIGLVAGAIQ
                     QLTGLTIIPGIAPIGEGIEIVGGIALVLAGAFCLVFVITKVFNKPLMKMGKLLGMNEV
                     AAAGMVATLANSIPMFQMLKDMDERGKIINVAFAVSAAFVLGDHLGFTAGVAQDMIFP
                     MIVGKLVGGVTAVAVGIYMANRMMKKNKAKEQTAVKDNG"
     gene            complement(21733..22278)
                     /locus_tag="U0290_000187"
     CDS             complement(21733..22278)
                     /locus_tag="U0290_000187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEM2300256.1"
                     /translation="MAEQSLGILELRSISKGYEMADVFLKAGNVTLFTFRPTCPGKFL
                     IILQGASGELTSAMQDAKEEAGKFHVSSYILHMAHEELLAFLNNKHPKVEVDAVGIIE
                     ISQLGAGLNAVNEALKKSAIHLKRMTLGASIGGKFVAVFTGEVSAIQEGMRILIETAE
                     PKKVIHHTVIPSPDELLKRYL"
     gene            complement(22271..22540)
                     /locus_tag="U0290_000188"
     CDS             complement(22271..22540)
                     /locus_tag="U0290_000188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EutN/CcmL family microcompartment protein"
                     /protein_id="HEM2300257.1"
                     /translation="MQIGKVTGSLWATRKDEKLNGLKLLLVEICTDETEDVRHSIVAA
                     DNAGAGNGDLVLVTTGSAARASTGDNTIPVDACIVGIIDSVERYG"
     gene            complement(22555..23127)
                     /locus_tag="U0290_000189"
     CDS             complement(22555..23127)
                     /locus_tag="U0290_000189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR02536 family ethanolamine utilization
                     protein"
                     /protein_id="HEM2300258.1"
                     /translation="MSMELDALIKAVTEEVMRRLQLPEKKMIIMGQDSEHTLRQCYLK
                     EYQVSLYDRSERACDILLLEELDIAELARISLFAPMNKKEQFITDHLLAGRPTWIMKS
                     GIKAHAYKRSAKYGIRQLFQEYEEKLSRFGVEFIESPVKETKESKVITEQDVEKLTKN
                     KSEFILPKGSFLTPLAKDYLQEKRISIKES"
     gene            complement(23124..23765)
                     /gene="pduL"
                     /locus_tag="U0290_000190"
     CDS             complement(23124..23765)
                     /gene="pduL"
                     /locus_tag="U0290_000190"
                     /EC_number="2.3.1.222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate propanoyltransferase"
                     /protein_id="HEM2300259.1"
                     /translation="MNNELITSLIEEVTRRALLETGVEVEASGRHVHLDRETVDALFG
                     PGYELTHFRDLSQPGQYVCKERISIVGPKSVIHNVVILGPIRKKTQVEISSTDGTALG
                     IKAPVRESGDIAGTPGILLLSAKNSVQLSEGLIVAKRHIHMTPADAEKQQVSQSEIVQ
                     VKINGDRPLIFDDVVVRISPDFATYMHIDYDEANACGFKKGIRGQIIKKTKAK"
     gene            complement(23778..24533)
                     /locus_tag="U0290_000191"
     CDS             complement(23778..24533)
                     /locus_tag="U0290_000191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cobalamin adenosyltransferase"
                     /protein_id="HEM2300260.1"
                     /translation="MAILTEDELRKAYLHTDLKTTKKLDIKKGTIITPSAKSFLSEKK
                     IDLHYIDEIAETKVVVEPVKKETTRAKFQTIYGGALDEKPEHMTHLRGNLLVFKDHPQ
                     IAFRGKLDTLEAEILETQCSVAAEFKDLAEDLQEILTFVRNIVRSEVLNEQIESVHLL
                     GMDEKELRERSHNPKKYYQMTHFMPDYTMGNAVIRLNKIRTMVRETELAAFLAFKEAD
                     YSIKRPDIIQALNRLSSLFWILMFRVRTGEYKK"
     gene            complement(24699..24983)
                     /locus_tag="U0290_000192"
     CDS             complement(24699..24983)
                     /locus_tag="U0290_000192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEM2300261.1"
                     /translation="MANANALGMIETKGLVGAVEAADAMVKAANVTLMGKEQVGGGLV
                     TVMVRGDVGAVKAATDAGAAAAERVGELLSVHVIPRPHSEVDAILPKSAE"
     gene            complement(25015..26475)
                     /locus_tag="U0290_000193"
     CDS             complement(25015..26475)
                     /locus_tag="U0290_000193"
                     /EC_number="1.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetaldehyde dehydrogenase (acetylating)"
                     /protein_id="HEM2300262.1"
                     /translation="MALEDKDLRSIQEVRNLIESANKAQKELAAMSQQQIDTIVKAIA
                     DAGYGAREKLAKMAHEETGFGIWQDKVIKNVFASKHVYNYIKDMKTIGMLKEDNEKKV
                     MEVAVPLGVVAGLIPSTNPTSTVIYKTLISIKAGNSIVFSPHPNALKAILETVRIISE
                     AAEKAGCPKGAISCMTVPTIQGTDQLMKHKDTAVILATGGSAMVKAAYSSGTPAIGVG
                     PGNGPAFIERSANIPRAVKHILDSKTFDNGTICASEQSVVVERVNKEAVIAEFRKQGA
                     HFLSDAEAVQLGKFILRPNGSMNPAIVGKSVQHIANLAGLTVPADARVLIAEETKVGA
                     KIPYSREKLAPILAFYTAETWQEACELSMDILYHEGAGHTLIIHSEDKEIIREFALKK
                     PVSRLLVNTPGALGGIGATTNLVPALTLGCGAVGGSSSSDNIGPENLFNIRRIATGVL
                     ELEDIRKEENQATSELPVDADALIQSLVEKVLAELK"
     gene            complement(26475..26996)
                     /locus_tag="U0290_000194"
     CDS             complement(26475..26996)
                     /locus_tag="U0290_000194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEM2300263.1"
                     /translation="MPNEALGLIEVTGFLGAVVAADTCLKAANVELIQCEVIRGGLTT
                     VELTGDVGAVNAAIEAGKAATEDLGCLVSSHVIARMSEDTKALFVPQEEVKTQPKEVE
                     QEEPKEVIQQVVEVNTNTKSAEKKLRAMKVIDLRKLAYTLNNVPIPKSKIKYANKDKL
                     VHALKDIYGRSEN"
     gene            complement(27011..27664)
                     /gene="eutL"
                     /locus_tag="U0290_000195"
     CDS             complement(27011..27664)
                     /gene="eutL"
                     /locus_tag="U0290_000195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutL"
                     /protein_id="HEM2300264.1"
                     /translation="MKNDKLPASVLSVKVVSNVDNGLFKQLDLKPHQRSLGIITSDCD
                     DVTYTALDEATKAAEVDVVYAKSMYAGAGNASTKFAGEVIGIIAGPSPAEVKSGLSVA
                     VDFIENGASFVSANEDDSVPYFAHCVSRTGTFLSKEANVAEGEAIAYLIAPPLEAMYA
                     LDAALKAADVTIGAFYGPPSETNFGGALLTGSQSACKAACDAFKMAVENVAENPLQY"
     gene            complement(27687..28568)
                     /gene="eutC"
                     /locus_tag="U0290_000196"
     CDS             complement(27687..28568)
                     /gene="eutC"
                     /locus_tag="U0290_000196"
                     /EC_number="4.3.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutC"
                     /protein_id="HEM2300265.1"
                     /translation="MNEQELKQMIEGILTEMSGGKTTDTVAAAPTKSVVETVITEGSI
                     PDITEVDIKKQLLVPEPADREGYLKMKQMTPARLGLWRAGPRYKTETILRFRADHAVA
                     QDSVFSYVSEDLVKEMNFIPVNTKCQDKDEYLTRPDLGREFDNEMVEVIRANTTKNAK
                     LQIVVGDGLSSAAIEANIKDILPSIKQGLKMYNLDFDNIIFVKHCRVPSMDQIGEITG
                     ADVVCLLVGERPGLVTAESMSAYIAYKPTIGMPEARRTVISNIHSGGTPPVEAGAYIA
                     ELIHNMLEKKCSGIDLK"
     gene            complement(28588..29952)
                     /locus_tag="U0290_000197"
     CDS             complement(28588..29952)
                     /locus_tag="U0290_000197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase subunit EutB"
                     /protein_id="HEM2300266.1"
                     /translation="MILKTNLFGHTYQFKSITDVLAKANEEKSGDRLAGVAAESAEER
                     VAAKVVLSKMTLGDLRNNPVVPYETDEVTRIIQDQVNDRIHDSIKNWTVEELREWILD
                     HKTTDADIKRVARGLTSEIIAAVTKLMSNLDLIYGAKKIRVIAHANTTIGLPGTFSAR
                     LQPNHPTDDPDGILASLMEGLTYGIGDAVIGLNPVDDSTDSVVRLLNKFEEFRSKWDV
                     PTQTCVLAHVKTQMEAMRRGAPTGLVFQSIAGSEKGNTAFGFDGATIEEARQLALQSG
                     AATGPNVMYFETGQGSELSSDAHFGVDQVTMEARCYGFAKKFDPFLVNTVVGFIGPEY
                     LYDSKQVIRAGLEDHFMGKLTGISMGCDVCYTNHMKADQNDVENLSVLLTAAGCNFIM
                     GIPHGDDVMLNYQTTGYHETATLRELFGLKPIKEFDQWMEKMGFSENGKLTSRAGDAS
                     IFLK"
     gene            complement(29994..31415)
                     /gene="eutA"
                     /locus_tag="U0290_000198"
     CDS             complement(29994..31415)
                     /gene="eutA"
                     /locus_tag="U0290_000198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine ammonia-lyase reactivating factor
                     EutA"
                     /protein_id="HEM2300267.1"
                     /translation="MTETILSVGIDLGTSTTQLILSELEIQNMASSFTVPRIVISDKR
                     IIFRSEILFTPILADNLIDVEAIRDFVTKEYANAGIKKEEIGMGAVIITGETARKDNA
                     SNVLDAMSGFAGDFVVATAGPDLESIIAGKGAGAHTYAKENNTSVVNLDIGGGTTNLS
                     LFDRGELIDTACLDIGGRLIKVDRETRKITYIAPKIQALIEKRGYPVKLGETTSPENL
                     QPVLGEMVELLKNSVGLGAPNDFYETIITNKGLKFLTEIECISFSGGVADCISTGALS
                     DPFRYGDIGLLLGKAIAESSLMTEKKYIESVETIRATVVGAGSHTAEISGSTITYTEK
                     IFPVKNIPILKLAKQEEDENMAEVIKEKLSWFKIENEMEHIALAIEGENSPSFQQVTE
                     YAKAICEGMKEPIALGHPLIIITWHDMAKALGQSIFGHLPAGHPLICLDSVKVDNGDY
                     IDIGKPVADGKVLPVVVKTLVFN"
     gene            complement(31505..32962)
                     /locus_tag="U0290_000199"
     CDS             complement(31505..32962)
                     /locus_tag="U0290_000199"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM2300268.1"
                     /translation="MTKTIREMCLRYTDLSEHDIEELIHTAKSLSVSAMYQDVDVFID
                     VYNKLTSEALVIHHTPPKTTKSLYKNKVVGETALRSNEPGVLRTLETGMNSNDLLAKT
                     QENVLIRQKVYPIRNKQRVIAVLILENDISAEIKAHFEIDNEETAYRDVSTTLSAMSK
                     LTDSITDQLDDAILIFDRNGILQQKNCAADQYYERLGYMEDIQGMHYDNLSLDQMMFD
                     AIMYQIETGKQPIQLKKEVVIAGNYFIMKQIFVKEEDEQECRFILILHDITDIKVKEA
                     EIVSKSVAIREIHHRVKNNLQSVVSLLRIQGRRSTSVEAQKILNESVSRILAIAATHE
                     LLSKQMEDGINLYMVIETVAYNIERCCTDCPKVAVRMDIDKRIYLDSDRTVALALVMN
                     ELLQNSYDHAFHPNESGEILLQIKEEKNIIHAEVTDNGHGFNVRKVSEKSLGLSIVKS
                     YIKDKLRGKVTIESNEHGTKTMFDFKYNSIHATKK"
     gene            complement(32955..33536)
                     /locus_tag="U0290_000200"
     CDS             complement(32955..33536)
                     /locus_tag="U0290_000200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ANTAR domain-containing response regulator"
                     /protein_id="HEM2300269.1"
                     /translation="MTGMNGRIVIADDEPITRMDIRDILEEANYNVVGEATDGFEAIE
                     LCKSHQPDLVIMDIQMPLLDGLKAGKRIISEGLAGGIILLTAFSDPKNTEKAKGFGAL
                     GYLVKPLDEKSLIPTVEMSIAKGRETRKLEQQLEKLTKKLEERKVIEKAKGVLMIENN
                     ITEEEAYNMIRNLSMDKRCPMMEIAETIVMSDD"
     gene            complement(33811..34950)
                     /locus_tag="U0290_000201"
     CDS             complement(33811..34950)
                     /locus_tag="U0290_000201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEM2300270.1"
                     /translation="MQKVSFKTDLYIGQGATDRLLDFKDKQIFIVTDPFMVSSGMINA
                     ITEKIDPSNTYTIFSEIIPDPPIENVVAGIEVLNECDANLMIAIGGGSAIDAAKAMKF
                     FGQKLGTVRAMPFIVIPTTSGTGSEVTSFSVITNKEKAIKYPLITDAILPDEAILDAD
                     LVKSVPPAITADTGMDVLTHALEAYVSTKANDYSDAMAEKVIQLVFTYLERAYKDGND
                     LEAREKMHNASCLAGMAFNITSLGLNHGIAHTAGAKFKIPHGRMNTLLLPHVISYNAG
                     ITSDFGNNPDNRAAERYTAIAKLLKMPASNTRLGVRSLINAIKQLQKKLNMPTTLTEC
                     GISRTDLNENIAQIAEGALNDGCTATNPRIPTETDVSAILEKMLA"
     regulatory      complement(35368..35511)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            complement(35540..36415)
                     /locus_tag="U0290_000202"
     CDS             complement(35540..36415)
                     /locus_tag="U0290_000202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization protein"
                     /protein_id="HEM2300271.1"
                     /translation="MVIKARCPASCGELLQGWILGGEKLISYPINWYSEVTLSDKVGL
                     NNSGHTKAWLAFQTTCEYFGVAKRDLPQVSLQVKSTIPVAKGMASSTADIAATIGATA
                     KWLNKSISEAEIAKLCLQLEPTDSTIFESLTLFDHLRGDIIQSSNWMPKLGVVVLEPL
                     TILETATYRQENHQAQLLKNEGHLAKGMDYFQQAVTQKSIHLLGKAASVSAACNQTIL
                     PKPFWREIVEVTENLDLVGLNVSHSGTVVGILYELEKTDPLEILFELERRYVTTFYSR
                     YYFREFVSGGVQIIS"
     gene            complement(36405..37490)
                     /locus_tag="U0290_000203"
     CDS             complement(36405..37490)
                     /locus_tag="U0290_000203"
                     /EC_number="4.1.1.81"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine-phosphate decarboxylase"
                     /protein_id="HEM2300272.1"
                     /translation="MKITTASHGGNYNELAKQHGLTKEMVLDFSANINPLGVPASLKQ
                     TITTNLDKLVEYPEPDYLALRARIASFHQLDLANVIPGNGATELIFGIAKVTKAQKVL
                     LLAPTFAEYERAFFDAEIVYAELTKETNFAAAQIVLEMLEQDTDIEAVCLCNPNNPTG
                     QLIAQQEMIKIADLCEKRNIYLIIDEAFMDFLEENETISMINYLEKFPHLAIIRAFTK
                     FFAIPGLRLGYLLTKNDLLAEALMQMREPWSINTFADLAGQMLLEDEAYIRQTFDWIN
                     AERDFLYRGLSKFSALTVYRPSVNYIFFHLEKPFDLRKKLLLKGIFIRSCANYRGLTE
                     NYYRVAVKSREDNRQLLTALEVIFSGN"
     gene            complement(37504..38697)
                     /locus_tag="U0290_000204"
     CDS             complement(37504..38697)
                     /locus_tag="U0290_000204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEM2300273.1"
                     /translation="MHKIMAINAGSSSLKFQIFTMPGEEVLVKGLIERIGLPDAIFNM
                     SFQNEKIKEIRAINNHGEAVEILLEQLKAHQVINDLSEITGVGHRVAHGGEDFVTSCV
                     VTDEVVKGIEAVTNLAPLHNPANIIGIKTFRELLPNAVSVAVFDTAFHQTIPEENFLY
                     ALPYELYEKHHIRKYGFHGTSHKYVAGKAAEVLEKPLEKLKIISCHLGNGASVCAIEA
                     GKSVNTSMGFTPNAGLMMGTRSGTIDATIIPYLVDELGYSLDEVMHMMSSESGVLGVS
                     GISSDFRDIEIAAKEGNSRALLTLRMFTGQICNYIGAYASAMNGCDALLFTAGVGENS
                     PLIRQMVTEQLSYLGVTCHVTKNNAGDMIISNDDEAVKVCIIPTNEELMIARDVEKYA
                     KQTIS"
     gene            complement(38763..39467)
                     /locus_tag="U0290_000205"
     CDS             complement(38763..39467)
                     /locus_tag="U0290_000205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HEM2300274.1"
                     /translation="MSAYLAEFIGTMVLIMFGNGLLAGLTLNKSLSQGANWVVVTFGW
                     GFAVMIGIYVAGAYSGAHLNPAVTIALAVGGSFPWADVVPYIIAQIAGAFVGASIVIL
                     HYYPHFKATPPEIDTHGIFSTGPAIRNTPFNLISEIIATFAFIFGLLMIGANSFTDGL
                     NPLILGFLVVAIGMSFGPTTGYAINPARDLGPRLAYFLLPVPNKSGSDWRYAWIPIVG
                     PIIGGLLAIGLFNILL"
     gene            complement(39495..40613)
                     /locus_tag="U0290_000206"
     CDS             complement(39495..40613)
                     /locus_tag="U0290_000206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEM2300275.1"
                     /translation="MNSFQIKTKVAFGTNSLQVLKEIKNKNVWIICDRFLADGEGLQG
                     LIGQLDTSNNVHIFTDVVPDPPISKVAGGVSEAGKIQPQVMIAFGGGSAIDTAKGIYY
                     FAKRLEKINISTFIAIPTTSGTGSEVTAATVITDPTTKIKYPLFLDELIPDMAILDAQ
                     LVVTVPPAITANTGMDVLTHAIEAYVSKDASDYTDALGEKSVQLTLRFLTSCYDDGRN
                     LANREKMHNASTMAGMAFNCANLGLNHSIAHQLGAQFHVPHGLANAILLDAVIRFNAF
                     KNRETEQKYAEMARICGIASRSDSNETAVRLLRERIVAMMEHMQMPRTLTDAGVAKEK
                     VYAKMDEIATNALKDACLPTSPTTPSHQELKEILEQII"
     gene            complement(40629..42038)
                     /locus_tag="U0290_000207"
     CDS             complement(40629..42038)
                     /locus_tag="U0290_000207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde dehydrogenase EutE"
                     /protein_id="HEM2300276.1"
                     /translation="MESLELEQLVKKVLLEKLAEQKDAPVKTTVKGAKSGVFDTVDEA
                     VQAAVIAQNNYKEKSLEERRNVVKAIREALYPEIESIAARAVAETGMGNVADKILKNT
                     LAIEKTPGVEDLYTEVATGDNGMTLYELSPYGVIGAVAPSTNPTETLICNTIGMLAAG
                     NAVFYSPHPGAKNISLWLIEKLNTIVRESCGIDNLVVTVEKPSIQAAQEMMNHPKVPL
                     LVITGGPGVVLQAMQSGKKVIGAGAGNPPSIVDETANIEKAAADIVDGASFDHNILCI
                     AEKSIVAVDSIADFLMFQMEKNGALHVTNPSDIQKLEKVAVTDKGVTNKKLVGKSASE
                     ILKEAGIVCDFSPRLIIVETEKTHPFATVELLMPIVPVVRVPNFDEALDVAIELEQGL
                     HHTATMHSQNISRLNKAARDMQTSIFVKNGPSFAGLGFRGEGSTTFTIATPTGEGTTT
                     ARHFARRRRCVLTDGFSIR"
     gene            complement(42045..43040)
                     /locus_tag="U0290_000208"
     CDS             complement(42045..43040)
                     /locus_tag="U0290_000208"
                     /EC_number="2.5.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cob(I)yrinic acid a,c-diamide
                     adenosyltransferase"
                     /protein_id="HEM2300277.1"
                     /translation="MSIYTKTGDKGTTALFDGNRVKKYDDRVETYGSFDELNAEISVA
                     EKFVTSAENKTLLRNVERQLFYVCAELATEHEASLASKIIITENDINQLEKVIDDYTA
                     KLPKVDSFVLPGSSTAGAFLHSARTVARRGERLLVRLSEQTAIRKELLKFVNRLSDFL
                     YILAREEDFRQMLDKATKLIVAKYLEQTGQEKSVTSDLSFSFCEKLMHQVCIVSEEIG
                     VPVTLAIVDAHGNARFNYRMEHALLVSAELATKKAYSAVAMKTSTEKLTEAVQPGAPL
                     YQLETLTNGDIVTFGGGVPIYGKDGAIIGGMGISGGSVEEDIHIAKKALSMIEKG"
     gene            complement(43055..43318)
                     /locus_tag="U0290_000209"
     CDS             complement(43055..43318)
                     /locus_tag="U0290_000209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EutN/CcmL family microcompartment protein"
                     /protein_id="HEM2300278.1"
                     /translation="MFMAKITGSVVSTKKEDSLTGKKLMIVQPVDANGEHVRSEEVAC
                     DSVGAGIGEYVLVARGNAARSVFAEPNSAIDSAIIAIVDSFDK"
     gene            complement(43323..43802)
                     /gene="pduM"
                     /locus_tag="U0290_000210"
     CDS             complement(43323..43802)
                     /gene="pduM"
                     /locus_tag="U0290_000210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PduM family microcompartment protein"
                     /protein_id="HEM2300279.1"
                     /translation="MIEKLVKIIVQRLKLRATNKTSIAISKLPRDPVAIFIESGTIRL
                     TQVNKHFLERILSGNRAESLTAWFEKATDYGVTIELELYDNGEPWLDYTMLSQLEFPV
                     FTNKGERLFHSNGQVICYGDSAVIPSGSTLCKYKKQLITPLANEYLTKNNIAVRERQ"
     gene            complement(43799..44638)
                     /gene="eutJ"
                     /locus_tag="U0290_000211"
     CDS             complement(43799..44638)
                     /gene="eutJ"
                     /locus_tag="U0290_000211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization protein EutJ"
                     /protein_id="HEM2300280.1"
                     /translation="MDILQTANERMEQLAALMNKDIKQKVSADQKVKVGVDLGTSSIV
                     FVVLDEHDVPLFGAFEFADAVRDGLVVNYRESVEVVTRLKERAEKCLGITLTHASGAI
                     PPGTVGNNKKVVANVIESAGMEALYTIDEPTAAAAVLGLQDGAVVDVGGGTTGISVFE
                     NGEVIYTADEPTGGTHMTLVLAGYYGVPVEKAEQNKREQKDSSEHFSVMRPVVEKMAE
                     ITRVHLEKSPSEPLYIVGGASAYSQFKDTFESYLKTPVFQPNYPQYVTPLGIAMSSGS
                     ENL"
     gene            complement(44659..45294)
                     /gene="pduL"
                     /locus_tag="U0290_000212"
     CDS             complement(44659..45294)
                     /gene="pduL"
                     /locus_tag="U0290_000212"
                     /EC_number="2.3.1.222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate propanoyltransferase"
                     /protein_id="HEM2300281.1"
                     /translation="MEREELKAIIKQIVTDKLSGVETEIPIGVSNRHIHLTENDYNQL
                     FPNEPIQVKKWLKQPGEFAAEQTLTVVSEKGELHRVRILGPLRKFSQVELSKTDARML
                     GMKIPIRVSGDIDGTPGIKLVSKHSEICLPKGAIVAKRHIHLPESVAHEYGVKQGDEV
                     SVLVGSEMRSLVLNHCTIRVNNQFIPEMHIDTDEANAADIAGTCFAKIIKS"
     gene            complement(45298..45573)
                     /gene="pduA"
                     /locus_tag="U0290_000213"
     CDS             complement(45298..45573)
                     /gene="pduA"
                     /locus_tag="U0290_000213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduA"
                     /protein_id="HEM2300282.1"
                     /translation="MNNALGMIETKGLVGAIEAADAMVKAANVSLVGYEKIGSGLVTV
                     MVRGDVGAVKAATDAGAAAARNVGEVQSIHVIPRPHNDVETLLPKGL"
     gene            complement(45598..46035)
                     /locus_tag="U0290_000214"
     CDS             complement(45598..46035)
                     /locus_tag="U0290_000214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEM2300283.1"
                     /translation="MHQAIGMIEIKGLASAITVADTMAKVANIQLVDTEKAKGFGWIT
                     VKVEGDVAAVNAALEAGEQTAIASDSFIAKKVIPRPGEEIFTVFWPKEEIEPEQPEVM
                     VETEKVEETEVPAEATCNLCHDPLCPRVKGDPRQDCIHFEEEK"
     gene            complement(46048..46395)
                     /locus_tag="U0290_000215"
     CDS             complement(46048..46395)
                     /locus_tag="U0290_000215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol dehydratase reactivase beta/small
                     subunit family protein"
                     /protein_id="HEM2300284.1"
                     /translation="MIPVVSKPAIYFHADVDANPDSIKQVLFGIEEEGIPCELEIMSL
                     KDEVQAAFRASASSPLLVGVTLKNDHLVIHYRNLPPDKPLFSAYRFCATTLENQRNMG
                     MNAARLVKGVPFK"
     gene            complement(46392..48212)
                     /locus_tag="U0290_000216"
     CDS             complement(46392..48212)
                     /locus_tag="U0290_000216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diol dehydratase reactivase subunit alpha"
                     /protein_id="HEM2300285.1"
                     /translation="MKYIAGIDIGNSTTEVALAMANSSKEAAFVASAITDTTGIKGTK
                     QNLHGIFKALRLALEKVNATTENLAEIRINEATPVIGDVAMETITETIITESTMIGHN
                     PKTPGGLGMGSGVTVLLDDVTSKSKDEDYIVIIPKTVDFEDAAKQINTYVENGYQITA
                     AILQADDGVLVHNRLNHKIPIVDEVGFIDKVPVDMLAAVEVAAPGKVIETISNPYGIA
                     TVFHLNSDETKNIIPVARALIGNRSAVVIKTPEGDVKARTIPAGHIELQSGSRTQRVN
                     VAEGSEKIMQAIMSLPKLDNASGEPGTNIGGMLEKVRQTMAGLTDKLPADIFIQDLLA
                     VDTFVPVDVQGGLAGEFSMEQAVGIASMVKSDHLQMAAIASEIEQELQVSVKIGGAEA
                     EAAILGALTTPGTNTPLAILDLGAGSTDASIINGKGEIIATHLAGAGDMVTMIIQSEI
                     GLEDRYLAEDIKKYPLAKVESIFHIRHEDGTVQFFDTPLSPTVFAKVVIVKQDGFVPI
                     PGDVSIEKIKLIRRSAKERVFVTNTIRALKYVSPTGNIRDIPFVVIVGGSALDFEIPQ
                     LITDALSHYSLVAGRGNIRGKEGPRNAVATGLILAGGAKA"
     gene            complement(48258..48770)
                     /locus_tag="U0290_000217"
     CDS             complement(48258..48770)
                     /locus_tag="U0290_000217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diol dehydratase small subunit"
                     /protein_id="HEM2300286.1"
                     /translation="MNQEALENMVRNILQEVNSGAVSTTTSQKVSGDTLTVRDYPLGT
                     KRPELVKTSTSKSLDDITLKSVLDGTIKPEDVRVTAETLKMQAQVARDAGRATLANNF
                     ERAAELTIVPDERILEIYNAMRPYRSSREELLAIADELESVYHATICSNYVREAAQLY
                     QERKKLKGDN"
     gene            complement(48787..49446)
                     /locus_tag="U0290_000218"
     CDS             complement(48787..49446)
                     /locus_tag="U0290_000218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol/glycerol family dehydratase medium
                     subunit"
                     /protein_id="HEM2300287.1"
                     /translation="MVEINEKVLRGIISEVLDELQLKEDKVSFQKEQPSVAVSDESFL
                     TEVGDAEPGRQKDEVVIAVAPAFGKYQTKNIVGVPHKQILREVIAGIEEEGLKARVVR
                     VFRSSDVAFVAVEGDKLSGSGICIGIQSRGTALIHQKDLQPLSNLELFPQAPLITLET
                     YRAIGKNAAKYAKGESPNPVPMVNDQMARPKFQAKAALLHIKETKHVVQGKNAVELQV
                     N"
     gene            complement(49484..51148)
                     /locus_tag="U0290_000219"
     CDS             complement(49484..51148)
                     /locus_tag="U0290_000219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol/glycerol family dehydratase large
                     subunit"
                     /protein_id="HEM2300288.1"
                     /translation="MKSKRFEELAKRPVNQDGFVKEWIEEGLIAMESPNDPKPSIKIE
                     NGKVVEMDSKKLADFDLIDHFIAKYGVDLSRAEEVMQMDSVKLANMLCDPNVPREKIV
                     LLTTAMTPAKIVEVVSQMNVVEMMMSMQKMRSRRTPTTQAHVTNLRDNPVQIAADAAE
                     AAIRGFDEQETTVAVVRYAPFNALSLLVGSQTGRGGVLTQCSLEEATELELGMRGLTC
                     YAETISVYGTEPVFTDGDDTPWSKGILASAYASRGLKMRFTSGTGSEVQMGYAEGKSM
                     LYLESRCIFITKAAGVQGLQNGSISCIGIPGAVPSGIRAVLAENLIAVMLDLEVASGN
                     DQTFSHSDIRRTARLLMQFLPGTDYISSGYSATPNYDNMFAGSNFDADDFDDYNILQR
                     DLKVDGGLTPVTEEEVVAVRNKAARVIQAVFDKLGLPEVTDAEVEAATYARGSKDMPE
                     RNMVEDIKAAAEMMDRGVTGLDVVKALSAGGFDDVAESVLNMLKQRVSGDFLHTSAII
                     DKDWNVISSVNDLNDYAGPGTGYRLEGERWEKLKDIAVAVDANELE"
     gene            complement(51167..51970)
                     /gene="pduB"
                     /locus_tag="U0290_000220"
     CDS             complement(51167..51970)
                     /gene="pduB"
                     /locus_tag="U0290_000220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003746999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduB"
                     /protein_id="HEM2300289.1"
                     /translation="MSEQNKLIDEILKQVMETVNDAPEKLVEDGGSRQMSEKAVQLTE
                     FVGRAIGDTIGLVIANVDGQLLEAMKLEKSYRSIGILGARTGAGPHIMAADEAVKATN
                     TEVVKIELPRDTKGGAGHGSLIIFGGDDVSDVKRAVEVALNELDKTFGDVYGNEAGHI
                     ELQYTARASHALNTAFGAPVGKAFGLMVGAPAGIGVVMADTAVKSANVDVVAYSSPAD
                     GTSFSNEVILCISGDSGAVRQAVISAREIGKKLLGALGDEPKNDRPSYI"
     gene            complement(51963..52250)
                     /gene="pduA"
                     /locus_tag="U0290_000221"
     CDS             complement(51963..52250)
                     /gene="pduA"
                     /locus_tag="U0290_000221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="propanediol utilization microcompartment protein
                     PduA"
                     /protein_id="HEM2300290.1"
                     /translation="MQEALGLVETKGLVGAIEAADAMVKSANVTLTGYEKIGSGLVTV
                     MVRGDVGAVKAATEAGAAAARNVGTVMSTHVIPRPHTDVEEILPVRVKSDE"
     gene            52553..53437
                     /locus_tag="U0290_000222"
     CDS             52553..53437
                     /locus_tag="U0290_000222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PocR ligand-binding domain-containing protein"
                     /protein_id="HEM2300291.1"
                     /translation="MLLQSKSNEMLIEKVMDEFSAATSLASVVVDIHGTEVSRLCNFT
                     PFCQLIRSNPKYRSLCQKCDMFGGLEASKTGKPLIYRCHAGLTDFSVPIVVENQLSGF
                     LLSGQVICEESSEVGNIQAEETDWKNDKELISAFRSVPVFSSKKINSSAEMLTIISQY
                     YLKSEMEKSREEQKQKIVFHHAKIAHHEENKEIRKALKYIEKNLNRPITLDEVASHVY
                     LSSYYFSKLFKKEMNVNFINYVNQKKMSLAKEMLKNPRLSIDNIARNLGFTQTSYFCK
                     VFRKEFEVTPKGYRETLK"
     regulatory      complement(53591..53781)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00174"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="cobalamin riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="adenosylcobalamin"
                     /db_xref="RFAM:RF00174"
     gene            complement(53847..54422)
                     /gene="cobC"
                     /locus_tag="U0290_000223"
     CDS             complement(53847..54422)
                     /gene="cobC"
                     /locus_tag="U0290_000223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ribazole phosphatase"
                     /protein_id="HEM2300292.1"
                     /translation="MQLIFVRHGETDWNVAKKYCGQLDVALNENGIRQMEQLREKLEN
                     YSIDLVVTSDLMRVKQSANILSNAKTLRFPALNEMNFGDFEGYTYQEISTKFPKAWNE
                     YCNNWQTALFSNGESFPIFYERVVAILEEEMEKWQQLDTVLLVGHLGVLRVIALFLQK
                     QTIAQYWDIDFKQGCYSLWDNKSQHFLISNQ"
     gene            complement(54423..55169)
                     /gene="cobS"
                     /locus_tag="U0290_000224"
     CDS             complement(54423..55169)
                     /gene="cobS"
                     /locus_tag="U0290_000224"
                     /EC_number="2.7.8.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenosylcobinamide-GDP ribazoletransferase"
                     /protein_id="HEM2300293.1"
                     /translation="MKTLILLIQFFTRIPLPVQINMDEINLKKGSALLPFVGVIIGAW
                     NWLIFTLVALLMPLPVAIIAGLFAEIIITGGFHVDALADTADGLFSSRKRERMLEIMK
                     DSRVGANGVIAICFYFLFYGSLFLSVPDTQQIGWLFFVLPIVAKGVTMLLFAKMTYAG
                     SKEGLGSIFLGVPWWPVVIAQVIVLVALGAFFSYIGVIAYAGVILFTIIYRAFVYKRI
                     GGMNGDTLGAGGQMGQLICLFCLVLLWGLI"
     gene            complement(55171..55728)
                     /gene="cobU"
                     /locus_tag="U0290_000225"
     CDS             complement(55171..55728)
                     /gene="cobU"
                     /locus_tag="U0290_000225"
                     /EC_number="2.7.1.156"
                     /EC_number="2.7.7.62"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional adenosylcobinamide
                     kinase/adenosylcobinamide-phosphate guanylyltransferase"
                     /protein_id="HEM2300294.1"
                     /translation="MSEMMLVTGGARSGKSSFAEKEATKYNRVLYVATGIAFQNDTEF
                     QARIKKHQATRPEHWDTFEAFKGIAAYLERNGNKYDVIMLDCVTMLVTNLFFSLLGER
                     ELTNEIADEVEAGIQSEVRAILKAGEQSSAKFIFVTNEIGLGVVPENKLTRVFRDIIG
                     RINQQIATEVEEVYFVVSGIPKRWK"
     gene            complement(55721..56464)
                     /locus_tag="U0290_000226"
     CDS             complement(55721..56464)
                     /locus_tag="U0290_000226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-L-fucosidase"
                     /protein_id="HEM2300295.1"
                     /translation="MPQVRDLSVIDVPGGCVLTSCDISAGFGEKVHDGLRVAPEVTAR
                     LTLRVALLEMLASGAVVVAVSDVIGAEMEPTGKRVIAGLKDELIKADLGHIELNGSTE
                     ENMNVTQTSVGVLVTGFATKAALKLINVHEAAVLFAFGEPIVGAEVLQRMAEMPDYHL
                     VKKLVEHSDVLEVVPVGSKGMAYEANTLARLNDCTFKASDVFNEATMNKTAGPASVIL
                     VAVKASEVKAFEQNFPAAKCLGELRNYHE"
     gene            complement(56489..56920)
                     /locus_tag="U0290_000227"
     CDS             complement(56489..56920)
                     /locus_tag="U0290_000227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EutP/PduV family microcompartment system
                     protein"
                     /protein_id="HEM2300296.1"
                     /translation="MKKMMVMGSVGCGKTTLCQKLHGYDILYKKTQAVEYFQEMIDTP
                     GEFVQHRQLYSALTVTAADASVIAILQSVTEKKQTFSPMFASIFAKPVIGIVTKVDLA
                     ESEKDIERAERELRMAGAKHIFYISSLEETGIEELRAYLED"
     gene            complement(56926..57276)
                     /gene="eutS"
                     /locus_tag="U0290_000228"
     CDS             complement(56926..57276)
                     /gene="eutS"
                     /locus_tag="U0290_000228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ethanolamine utilization microcompartment
                     protein EutS"
                     /protein_id="HEM2300297.1"
                     /translation="MSFDDNKERVIQEYVPGKQVTLAHLIANPNRDIYTKLGLEEGAS
                     AIGILTITPSEASIIASDIATKSGDVRIGFIDRFSGSVVLTGDVSSVESALQQVVYSL
                     HEILDFSIPKITRS"
     gene            complement(57424..57978)
                     /locus_tag="U0290_000229"
     CDS             complement(57424..57978)
                     /locus_tag="U0290_000229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMC domain-containing protein"
                     /protein_id="HEM2300298.1"
                     /translation="MKMDTLGFLELNSISKGIEAVDTMLKAANSELIYAKASCPGKYY
                     ILIAGTVDSVAQSIEAGTKIGAANIVGNLVIPRVSDQVIKAINKTEVPDEMNAVGVME
                     YYSCSGSIIAADAAVKAADVQLMDIRLATGIAGKSFVVLTGDTAACEAAVEAGLAAAK
                     EEALLINKVVIPRPRKEVFESLIY"
     gene            complement(57975..59339)
                     /locus_tag="U0290_000230"
     CDS             complement(57975..59339)
                     /locus_tag="U0290_000230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SLBB domain-containing protein"
                     /protein_id="HEM2300299.1"
                     /translation="MSQMSILEKIKDAGVVGCGGAGFPTHAKFSGEVEYLIINAAECE
                     PLLKTDHFVMRNHAVETIKAIEMVKSQVGAEFAVIATKRYYTEEIAALRSAITELDAS
                     VTIHEMDNVYPTGDEQVMVFEVTGRVVPPSGIPLMVGCIVSNVSTMWNVFHAIQDDAP
                     VVRKQLTVTGAVGEPKLLDVPVGTPFEVCLAAAGGTNLDEYLFLDGGPMMGKLNDKST
                     IAEKVVTKTTSGLIVAEDTGYLHKLHYQTVEQIFNETKSACIQCSLCSDLCPRKQLGH
                     DIHPHKVMRHFAVAEDITDIKPDPIWEEAMICCECGICEVIACPMGLSPRQVNIHVKK
                     ELLKQGVRYQTDKKEFTPDPMREYKSIAPKNILIKMGLQQYADVHLETMHYLDVDEVF
                     IPTKMHIGAPSIPVVSEGDIVKKGDLIAKIPDASLGANIHASIDGQIIRITEEQVHIK
                     KVMS"
     gene            complement(59458..59937)
                     /locus_tag="U0290_000231"
     CDS             complement(59458..59937)
                     /locus_tag="U0290_000231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional precorrin-2
                     dehydrogenase/sirohydrochlorin ferrochelatase"
                     /protein_id="HEM2300300.1"
                     /translation="MKYPIMLDITGKRVVIIGGGKVALRKVKGLLHTGADILIVGLDV
                     LPEIKELQVQVKEEAYRAEHLIGAFLIFICTNNPEVNQMVLKDRLPEQLVNDTTEQKN
                     SDFFNMATVSKNELLVGISTGGGNPGYAKKVKREVRQLVENLETEEIGKRNKNDKTC"
     gene            60029..60436
                     /locus_tag="U0290_000232"
     CDS             60029..60436
                     /locus_tag="U0290_000232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2300301.1"
                     /translation="MFNQAKRISTFFTFNGNGEEAFNFYLDTFPDAKKIGLTYFTKPE
                     QGGDIGKVLNATFEIKGASFMIMDMTNNASPDFSWATTTLYFADTEDEFDTLFEKLAK
                     EGTVMMGPEAVEALRKVAWVTDKYGITWQLAFV"
     gene            60567..61139
                     /locus_tag="U0290_000233"
     CDS             60567..61139
                     /locus_tag="U0290_000233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease proteolytic subunit"
                     /protein_id="HEM2300302.1"
                     /translation="MAENTKNENITNILTQKLIDTRTVLIYGEINQELAEDVSKQLLL
                     LESISNDPITIFINSQGGHVEAGDTIHDMIKFIKPTVKVVGTGWVASAGITIYLAAEK
                     ENRFSLPNTRYMIHQPAGGVQGQSTEIEIEAKEIIRMRERINRLIAEATGQSYEKISK
                     DTDRNFWLSVNEAKDYGIVNEIIENRDGLK"
     gene            61204..61551
                     /locus_tag="U0290_000234"
     CDS             61204..61551
                     /locus_tag="U0290_000234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300303.1"
                     /translation="MKLTKENFQKLDQIHLSLENRHSMSEIIAILSESYIEITQNGVV
                     KDFSYYKSLTTLGNSSLEIMDYDIKILDETKVLSYYKLKNTSENSYTMRSNVWIIENG
                     SWKLTFHQGTKIV"
     gene            complement(61586..63121)
                     /locus_tag="U0290_000235"
     CDS             complement(61586..63121)
                     /locus_tag="U0290_000235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="internalin N-terminal domain-containing protein"
                     /protein_id="HEM2300304.1"
                     /translation="MKKTIKITTSLLLSFACVFSIGDFTKPHTVEAETVYSLTDSKPI
                     NEIFPDPKLAQVVANWLKLPSATSPVTQNQLNTVKSLHFDSKGVQSLEGVEYLKNLTQ
                     VFGYGNQVSDLGPLSNLTQLEIIQMPRNQISDLTPIANLTALMSLDFEFNNLQTIEPI
                     KNLTNMLELNVSANPISDISAVKNMTQLEFLTIRDCEVSDLSPVENLSNMLMFWAGRN
                     NISDITPLKNMSKLLGLSLFGNQIKDVSVIKNLTSLEDFDIKANQVSDISSLATSTTL
                     ETLTLSFNQIIDISSLKNLTNLTRLELANQTRVLDAVEVDDPLILPAPVIDENGSRVQ
                     PTKVSHAGIYANGEITWEGLQSNYILNYEYNLPVAIGSLTTTYSGKITQPLLEKPVNP
                     ITPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVDPVTPVNPSNQVNPI
                     DPVKSVLQVTETLMKQTTSVNTIVAKDNRNLPKTGDSGMHSSLVSGLMLAVSSVILLR
                     KRK"
BASE COUNT        17773 a        13901 c        11206 g        20461 t
ORIGIN      
        1 aaaaataata aagatgaatg tagtaattcc aatattgttt tccatttgaa acacgattaa
       61 caattcaata agtaaaaaca aactcactat cgcaccaaaa atcgtccaac gtttgcggat
      121 atttttgtaa agttgaatta gggaagtctc gtcagtgaaa atagcttcct ctgtttctcc
      181 aggagctaca gctttgcgga aatacatcca attgccattt aatactggat agctaaaaac
      241 agtctcccag ccagcatctt cgaaaagtgt tttgtaggca tcttcgtctc cttcattttc
      301 tttgaaatca atcgcatagc tgtatttcgc aggctctccc tgtttgaaat gatatctaaa
      361 agatttatat ttttgaaaga accaaccatt ttgtgccatt tcatttaaat aggcttcttc
      421 tttctccata ttgtccacgg taaaaaactt aacgactttt ttctccatta ttagacctcc
      481 cttgagtttc tatacaattc ttcgatgcgc gctttttcta attgcaaaat atctgtgcca
      541 atttcagtaa tttgatagat tttccgatta ctctcttctt gaataatttg gatcaaatta
      601 tctttgttca ttttggataa gcttccgtaa atagtcccgg gaccaagctt gattcgatca
      661 tctgtcatct ttgcgacgtt ttcgataatc gcgtaaccgt gccttggttt gacgagcgat
      721 agtaatatgt aaaaagcggt ttcggtcatt ggaagatagg ctttccgtaa tttttcattc
      781 ataactatat cgcacctcga tgtatttgat gcttataata tatcacggct cgatataatt
      841 tgcaataccc cattttttat ttcttgaaat accgtttttt ctttgataat tagccatttt
      901 gttggatttt gggccatttt tctagcaatt agtggttttg ttcgttggtc aaataaatcg
      961 tcccaataaa acattttctt taacatgttg aaccgaattg ggtaatgagc tgcttctaat
     1021 cgtattaatt gtttaatttg gcgcttaata atttgggagc ggatttgttt tttaggtaaa
     1081 tcaagaaaaa taaccacgtc cgcttggtta atgctctcgt ccacccatgc ttccaaatga
     1141 acgccttcaa taatccagtt ttcttgttga agaatcttat ttaatacagc tattttttca
     1201 ttgtcggttc gtcttacctc tgtttcttct cgtttccaga caatgcgatc tgtttcaaaa
     1261 taatcgattt gttgccactc ggaaagcttt tttgctagag tggttttgcc gcttccgacg
     1321 gatccgataa tacgaatttt cataaaaaaa cctcgcttta aattaattac tatcttttta
     1381 ccccgctttt attttataat tatctcattg tgataaaagg gagggaaatt tttgattata
     1441 ttatttattg tatcaggttt gttagctggg atggtattac cagttcaaac ggccatcaat
     1501 acgcgactta gtacatatac gaaatcaccg tttttagctt cgtgggtttc ttttatggta
     1561 gggacaactg ttttacttat cgtttgttta tttacacaaa aatcatggcc aatatcttca
     1621 gaaatgattg cctcaaatcc ttggtatatc tgggttggtg gtggaacatt aggcgttatt
     1681 ttcttaacgg ccaatatttt acttttacct cgacttggtt cggcacttct tgtgatgatt
     1741 acggtttgtg gacaaatgat tatggcgatt attattgata actttggttt atttcaagta
     1801 ccaatgcatg agattaatat cgaacgtcta cttggcgtta tcttaatgtt cggcggcatt
     1861 tacttgatgc aacgctttta aaaggaggag aaaacatgac aaaaagatca tccaaatcat
     1921 tattactatt tatggcaatg ggacttgttt ctggactact ttccccgatt caaacgtcga
     1981 ttaatagcca acttcggctc actgtcggtt ctccttttgt ggcatcattt atttcctttt
     2041 tagttgggac aacgttactt acgcttgttt gtttaattgt cgagcgtcgt ttgacttttc
     2101 aactgaaagg tgtcggccga attccttggt gggttttcac tggcggtgcg cttggagtgc
     2161 tcttcgtaac ttctaacatt ttacttttac cattactcgg ctcagcaatg acggttgttt
     2221 tagcgctttg tgggcaaatg attattgcac ttattattga tcattttggt tttttcgggg
     2281 ttattcctca tccaattaac cgttatcgta tgattggtgt tttattaatg cttgttggtg
     2341 tatttttaat tcaacgtttt taaaaaagga aaacctctcc ggctttgatg tctggagagg
     2401 ttttttatta tttcttttta ttgcggaaaa cgagttcgga atttttgtaa aaaatgtctg
     2461 tttcaccagc gcggtaattg acgactctgg caacggcaaa aaagtaatcc gataaacggt
     2521 tgacgtattt taatacttct tcgttacttg aagcaatttt taacataccg acgatttcgc
     2581 gttcagctct tcttgttacg gttctagcca tgtgcagtaa tgaggctgct tgcgttccac
     2641 ctggtaggat aaatttttct atttctgggg gttcatcggc gtagatgtca attcggtctt
     2701 ctagccacgc aacaggctca cttgttaatt tatacgcacg cttgccttct tcggttgcaa
     2761 gatcccctcc tgcatcaaat aattgctgtt gaatttgttc gagttcggct tgaatttctg
     2821 gttcagcccc aagtgttgtt atcgtgtagc caatcagcga attaagttca tccaaagttc
     2881 catatgcatc gatacggata ttatctttac ttactttgct acccccgata attcttgtca
     2941 ttcctttatc gccggttttt gtgtagatac gcatattttt tctcctttca tgattttttc
     3001 tagttggtcc atttgaatat ttgcttctaa aagggccgct agtttgtcgt attcttgttc
     3061 tttgtgttct ttcagattaa tgatttcatg cggataaacg gatttgtttt tacctgttag
     3121 tagttcgtca aatagatttc ctaagaaaac atcattgtcg aaaataccat gaatatatgt
     3181 gccgatgata tttttgttga cagagatagc gccatcttgg tgggtttctt cgtttccgtt
     3241 caccgcttta atttcgcaaa atggactagt gctctcgcct cgcttcgtct cacccatatg
     3301 gatttcgtaa ccttcaactg cttcacctga atgcgtcaca cctgtaattt gagtagtgcg
     3361 tttttggtcg agaaaaatgg tctcggtatc tagcaaacca agtccggcta tttctaattg
     3421 tttactctcc acttgattcg gatcgagcat ttttttaccg agcatttggt agccaccaca
     3481 aatcccgatt acttttccgg catttttagc atagttttga atggcatttt taagtccaga
     3541 ttcttcgagg aaagccatat cttctagtgt atttttactt ccaggaataa tgactaaatc
     3601 tgggtttcca aaatcagcta tattacggat gtagcgtaca cttatgtcgg gctggatttc
     3661 cagaatatga aaatctgtga aattagaaat cctcggtaaa caaataatcg cgatatcaag
     3721 tagtgcgtta ctatccggca cgtaattttt cccacttaga gaaacgctgt cctcttcttc
     3781 cagttgtaga ttggcataag gaatcacacc gataaccggg acatttgtga gttcctcaat
     3841 catatcaatt ccgggttgta aaagagctac atcgccacgg aatttattga taataacacc
     3901 tttgattcga gcccgctctt cttcatttaa cagcataatg gtgccgtata tcgaagcaaa
     3961 aacgccacct ttgtcaatat cagcaactaa gacaactggg gcatcgacca tttttgccat
     4021 gcccatattc acgatatctc ggtcgtttaa gttgatttcg gctgggcttc cagcaccttc
     4081 tagtacaata atatcatttt catctgctaa actctggtaa actgcctgga ttttcgggat
     4141 aagggtttgt ttgaaatcgt ggtacgtcac agcatccata ttatctaaaa ttgcacccat
     4201 aaaaaccact tgcgactgcc tgtcattggt cggtttaagt aacacgggat tcatccggac
     4261 atctggaaaa acaccagctg cttctgcttg aaaaacttgt gcgcgtccca tttcatctcc
     4321 tgtcgccgtt atgaaagaat tgagtgacat attttgagat ttaaatggaa caactcgctt
     4381 tcctttattt ttgaataggc ggcataggcc tgcaaccagt acacttttcc cggcatcaga
     4441 agcggtacct tgaatcatta tttgctttac cattaattag tcaccttccc cgtatgcgcg
     4501 aaaaaatcgg cttctttttt gaacagtgga tagccagctt gttgatgcaa tttgatgagc
     4561 caaggctgta ctaatcccgc ttgttcgaca ttacttttct ctaagaaaac gttgctcgtt
     4621 tccccgtctg tcaaaacgct tccgtccttc agcatataga cataatcaca aatttcataa
     4681 attaaatcga tatcatgact ggaaataagt attttctttc cttggcttgc aagacgttcg
     4741 atgatttcca tcatgatttt tttgccaatc ggatcaagac cagcagttgg ttcatctaaa
     4801 agtaaccaat ctgtatcaag aacaagggca cccgcaattg cgacacgttt tttttgaccg
     4861 tagcttaaat actggactgg tttatgctga aagtcctttg ccccaacaat gtctaatact
     4921 ttcgtcactc gtgcctctac ttccgtttcg ctaacaccta ggtttctaag tgcaaaggct
     4981 acatcatcac gaacattcga ataaaaaatt tgttggtcgg gatcttggaa aacgatgctt
     5041 actttttttc gtaaagcaaa taatgctttt ttcgtatacg cgagtggttt tccttcaaaa
     5101 taaacggtgc catcgctcgg tttgttaata ccaagtaact gcataaaaag cgtcgattta
     5161 ccggagccat tcgcaccaat aagtccgata atattgcctt tttctaaatc aattgaaaca
     5221 tccgttaagg cttgtttgcc atcttcgtat tggaatgaaa tatgttctgt tttaagcaaa
     5281 ttggcttcct cctagatatg aaattctcct tgatatagct tcacatcaag tgttataacc
     5341 atttcattat atcttttcat aacacgatta aataaagtat ttacgagcat gccaaatgaa
     5401 cgataactat tttttatgcc gtgataacca aaacgcaggc tctgcgcttt tcgaattgcc
     5461 gccgcttcct ctaagaaaat aaagataaaa cggtaaatta aaatggtcag ttcaatcagt
     5521 acttttggaa taaaaattcg cttcatcact tttgttaatt gtaccacggg aacggtcaag
     5581 acgaaaaagt aggttgcggc taagcaagcg atactccgga aaaagacttg tgttgccgtc
     5641 gtaatagtca cgtctgatac accgagatac aaactcccaa tcgaaatcga agcgagaaaa
     5701 ctgcttggat ctttagaaat cgaaatgaga atcgaaagta aactaaaaag tagaaatgaa
     5761 aatggtaaaa ggagccattt caaatattgt ttaaagtgaa ttttaacgac atagagcgtc
     5821 aatggtacca tgcagaagaa cagtattgct tggatgagca caggaccagt taacgcgagt
     5881 attagaatcg cgacataaaa taatgctttt aatgatggcg aaaaagctat ccaccggttt
     5941 tgataagcat atttatcaat ggttaacatc gttctcagct ttccgcttgc cacgacttac
     6001 accaatgaca tacgcgataa ttcctgttcc gatacaacct tgaagcgtaa ataataagct
     6061 ttcaatttca ccactttttg gttcataaag aggttcaaac cacggttcat agcttggatc
     6121 gattttggtg atttccgcct ctgcttcccc gtccgagccg ccgtattctc ccgttttatt
     6181 gaagaagaat ggactaacca ttaacaatac tactaataga attaaaatga cattgatatt
     6241 tatttttttc atcgtaattg tgccaccttt tctggtaaat ttttgctaat aagattgtac
     6301 atgactaccg ttagcaatcc ttctgcaatc gcaattggaa cttgtgtcac acagaaaatc
     6361 gccatgaact tcagaatgga tgccatcatg ccggatgctg gatctgggaa aacgactccg
     6421 agctggacgc tggtagttaa gtaggttgct aagtcagctg tcatcgcaca taagaaaatc
     6481 gaaacacttt tattacagtt taatttacga gcgagtttgt atacgacaaa accaaccatt
     6541 ggaccgataa ccgccatcga cattgcgttt gcgccaagag ttgtaatacc gccgtgtgca
     6601 agtagtaacg cttggaaaag taagacaatc acaccaagta cactgacaac gagcggtccg
     6661 aacataacag ttgcaaggcc aacaccagtc ggatgagaac aagatcctgt aacggacgga
     6721 attttaagcg ctgaaagaac aaagataaag gctgcgcata gtgccaacag taatttgttg
     6781 tttttatcta gggcaattaa tttacgaata cgaattaaac caagtacaag gaatgggata
     6841 aatacaatga accaaaagac agcccattta acaggtaaaa agccctccat aatatgcatt
     6901 gcgtgtgcgg attctgggtt cgttaaagta aaataaataa cacctattaa aacaaatggt
     6961 agaaacttcc ataatttttt catttatatt gctcccttct ttttttcacg ataatcgtgg
     7021 taaagtatga cattttttcg tctgggttta tctcgttcat gccgtatgtg attttttcag
     7081 tcgccatggc aacatcgctt actactactg ctgcatcaag taaattcagt ttttttagta
     7141 atgtcgtaag aaggggtaaa ttgcttgctg ctttcattaa gacaactgtg tcaaataaag
     7201 tgagcgcttg ttcgattttt tcagcacctg ctgttacagg gatgacagcg aaactttcct
     7261 cgtccattac gagtggtaat tcaatcttgg aggcgatatt ggaaaaggac gaaatacctg
     7321 cgagtgtcac tgtttcaatc tctcctttta ataattcgag taaatagcta taagtgctgt
     7381 aaaccattgg atcgccaagt gtgatgaaac caacatcatg cccgttttga acatctgctt
     7441 tgatttcttc ggcgatttct ttccatgcaa gcattttttc ttctttgttg taactcattg
     7501 gaaaatggcg ttctttaatg attaatgtat cttttaaata agggctgacg attttcttag
     7561 ctaaactttc gccgcctttt ttgggttgtg gcgtgtagag aatttctaaa tttccgagtc
     7621 tttctgctgc ttccatcgtg actaacttgc tatctccagg acctgtacca atgccgtaaa
     7681 atttagccac gtgctttcac cctttctatt gccgtgtgga tatgatcgat aaattgggct
     7741 tgaataagcg gattttcgcc tagaccttgc aaatgacatt cagtttgaat gccagcttgt
     7801 tccagcgtgc ttttccaaga atcctcgtca tcagaagcca tatcgttcgt agcgtgatca
     7861 cctgctacaa gcataaacgg cattaggtgc gcttttttta tatttgcttg ttgtaatcgt
     7921 tcaattactt ggtcaagacc agggtaactt tctaccgcac aaaggtaaat tggttcgttt
     7981 aacaacatat ggtcaaggca tgcataggcg ctgaaagcac gatgcttcga accatgtccc
     8041 atgagaatta gcgcttcttg ttcttttaaa ggtggcattt ggtggcgaat ggcttcgatt
     8101 gctttttcgt aatcttccat cgaatcaagt aacggttggc tgacaataat ggaatcgaaa
     8161 tccggcttga atttttccac ctgtgcagtg attttttcaa attcaccacc actaataata
     8221 tgtagcgact gaataatgac ttctttgtag cctaattcct ttagttggtt taatgcttgg
     8281 cttggtgtgt taatatgcat attgtcacga gtttttagtt ttttgatgat tttattggat
     8341 gtgaatgcac gaaacacgtt gtaatctggg aactcttggg ccactttttt ttcacaggct
     8401 tcaatcgttt tttctcttgt ttcaggataa cttgtgccaa aactaacgac taaaatcgct
     8461 tttttcattg tggtactcct tctaattttg ttttttggat tagttcaatt aagctctctg
     8521 gtgtggcgct ttcggcttcg ataaaattgt tgataccgaa tgatgctaac gttgcgctcg
     8581 tgaaccttcc aatggaaaga attgttttcg tttgtaaaat ggctttttct tcggttgtta
     8641 gtacgtcgag taaattttga acggaacgcg aacttgagaa acaaacttgt tcaaagcttg
     8701 caaggtcaaa tggtcgttct gtcacaggac gcatatcata taacggcatc atttccatcg
     8761 cttccacttc tgctaaaatt gcgttaactt ctgccgtatc aactatgctt ccgataatta
     8821 agttgctcac atttttctgt aaccgtggta aatgctccaa aattaattcc gtgctccgcc
     8881 ttttaatgaa actatctgga ataattcctt tttcactaaa agcttctttt gtttgtttgc
     8941 caatagcggt aagatgggta ttttttagag aacgaatatc taaatcaagc tgggctaaat
     9001 aatcaaaaaa tcgttctacc gcttctttgg atgtgaaaag aagtccgctt acttctctta
     9061 gttcttcttt tgttttcgtt ggcacaacat ctactacttg aatattggga tacattgtta
     9121 cttctccgcc taaatcgcga atttgttccg cgagcatact ttttccagct cgtgctcttg
     9181 gaagtaatac ttttgtatgg aaaagtggca tttcctcaaa gaagttaagc tgcggtcgta
     9241 agctcaccac atcaccaaca acaataagtg ccggcgaaga aataccagat tccgctactt
     9301 tttgttcgat gttttgtaag ttcccggtaa ccgttaattg tttgccgcga gatgcccatt
     9361 gtacaatcgc aacacccgtt tcggcttttc gaccattttc tagtaagttc gcacaaatat
     9421 taggcaaatt agtcattccc atcaggaaaa cgagcgtacc ttccagtcta gcaagggctt
     9481 cccaatctag tggatcgcgt ccttttttca aatgtccggt aatcacgtga aaactcgaag
     9541 caaaattacg atgtgttact gggattccag cgtaggcaag cccaccaatt gcggatgtga
     9601 ttccaggaat aacttcaaat ggaattcccg ctttatagag tgtctctcct tcttccccgc
     9661 cgcgaccaaa cacataaggg tctcctgctt ttagacgaac aaccagctca tttgtcgcag
     9721 cttctttaac aagaatttgc tcgatttcct cttggggaat tggatgatga agtggttctt
     9781 ttccgacata aatgagttta caactagctt ttcgttcttg gagcatcgct ggttcaacga
     9841 ggcgatcgta tacaataaca tctgcctttt gcagtgcagc taagcctttc acggttagca
     9901 actgtgcatc tccaggacct gcaccaatta acatgacttt tcccattagt agacctccaa
     9961 ttgagttaaa atttctggta gttcgcttaa atgatttatt tcgattggat aatttaattt
    10021 tttgcgacga atcacaataa ctggaatatt taattctgcg gcagctgcga gtttttcttg
    10081 aaagccacct tgttttccac tctctttagt gattaataca tctgccccag tcatttctag
    10141 ttgagttcgg ttcgcttctt tggtgaacgg tcctttcatg ccaatgatct ggtcggcaac
    10201 gagacctagt tcttcggctg aacgaattac atcagacact ggtaaaatac gagcgatgat
    10261 atgtcgattg tttaaaccag ctacgaattc tggtaaattt ttactaccag ttgtaagaaa
    10321 gattcgtttc ccaagtttca ttgcaactgc acaagcttcc tcaatatctg ctaccaaata
    10381 agtattatct gtttgttcac tagtgcgttc aaaacgaata taaggaatgt ccgcttcttt
    10441 gcatgcctcc atcgctgttt cagaaacaat ggtcgcaaat ggatgagtcg catcaataac
    10501 gaggtgaact tttgtagcat gccattttag gagcatttcc tcttttgata atctgccaca
    10561 aaatacgttt tcggcatgtt gtttcgctaa agtttctccg taatcggttg cgacagagag
    10621 tataaaggct tgcttttttt ccgttagcca gtcgctaatc gccaagctat ccgaagttcc
    10681 tcctagcacg aaaatcatag tgtgtaacct cgtggtgtga tcattttgcc atttttcacg
    10741 taggtttctt tgtttcctac aatcaccatc gttgtcatat ccactaactc ataatcaata
    10801 tctcgcatcg ttgtaatgat ttttcgctct tcttttcgac caacatcttt cacaatacca
    10861 acaactgtgt cccctgattt atgctccatc atcttttgaa aagcattggc caaatgattg
    10921 gcgcggcctt tacttctcgg attgtaaaaa cagacaacaa aatcggccat tgcagcgtgg
    10981 gttagacgtt tttcgattac ttcccatggt gtcattaaat cgcttaaact aatatggcaa
    11041 aaatcgtgca taattggcgc gccgagaaca gcagcggctc caatacttgc ggtaattcct
    11101 ggaatcactt tgacttctaa atctgggttg cttttttctg cgagttctaa aactagacca
    11161 gccataccgt aaattcctgc atccccactt gaaacaactg ctactttttt tcctgttagt
    11221 gcaatatcaa cggcttcttg gcaacgatcg atttcgcggc gcatgcctgt tttcactact
    11281 tctttatctt taattagctc tttgatgagt ttgatgtacg ttacgtaacc aacaatcacc
    11341 tccgcgtctt ctattgcttg cagtgcttca ccggtcatta atcgtttatc tcctgggcca
    11401 attccgatta cataaatcat tttgccacct cactattttt agttaatttc cctgctgcga
    11461 aagtcacgcc attttcagca aatcggcttg taacaacatt tccgttacta ccaatgtctg
    11521 ctgacgatag ggcgacattt cctacttgaa cagttttttg aacaaaagcg gatgttggat
    11581 attttccagc aactgtttgt aattcttctg ctggatggac aataaatggg acacgccatt
    11641 tctccgctaa atgaagaatt gccggttctt ccgcttttaa agtaatacta tgaatctcac
    11701 ggaatgcccg cgggtgtatg ttttcttgtt cacaaaaatg tgtaaatgct gcagctatcg
    11761 tttccgctga aacgcctttt ctgcaaccga ccccgaggat aaattgctta ggtaccagct
    11821 ggatgcgttc atgtgtcgcc acttgtagtt tatatttagt tgaaatgtaa acttgcgggc
    11881 taacttcttc cattgtaaaa ccgcgtgtat ctatatctaa tggctcatcg atgtacaatc
    11941 caacttcttt tcctgctgca agtaaaccat tgatgcgttt cgttgtcgct ttaaaatctg
    12001 gtaaataacc atttaattgt ttggcgatat tatcaatggc agctacattt gcgcggtctg
    12061 ttgcggttgt aattactgcc gcaccacctg ttatcgcagc gatttgttcg gttagttcat
    12121 ttgccccgcc aacatgtcct gaaagcaagc tgataataaa tttcccatgt tcatccatga
    12181 caagtactgc tggatcagac agcttgtctt ctatcgctgg agcaagcgtt cgaaccgcaa
    12241 ttccagtcgc cataatacaa atcaatgctt gatattttgt gaaaatttcg cgcatcgctg
    12301 ttccaaaatc cggcgttaaa gaatttgttt gctcattgca atgctttcct ggtacaaaaa
    12361 tcgttgctgc taccgttttt gttaacgtta ttgctaaatc gcgaccacgt tctgtgacag
    12421 caataatcgc cagtttatct gtattcatgt ttgaaatcct tgtcgtatag cttagaataa
    12481 taaaactctt ctccaaggaa atcaccgacc ataataagcg ccgttttcgt aattccagct
    12541 tctgttactt tttctgcgat atcttctaac gtgccggtta ctttcttttc ttccgcccaa
    12601 gtcgctttgt aaatgacagc tgctggggtt tctggtttat aaccgccttt gattaattct
    12661 gaaacgactt ttctaatacc ttgaacggac aagaaaatta ccattgaagt ttggtgcgcc
    12721 gcgtatgaac ggagggattc acgcgatggt actggagttc tgccagccat tcgggtaata
    12781 attacactct gacttacttc tggaactgta tactccaccc caaaactgct tgccgcgcca
    12841 aggaatgaac tcacacccgg tgtacatgtg aagggaatcg aacgcttttt catttcctcg
    12901 acctgttcac gaatcgaacc ataaatagaa aagtctccgg tttgcaaacg aaccacttct
    12961 ttaccagcag tcacgcccgc ttccatgcag tcgatgattt cgattaaatt catgcttgca
    13021 ctattatgga tttcgcagtc tggtttacaa tattctagca actccgggtt tacgagcgac
    13081 cctgcataaa taacgacatc cgcctctttt aataattgat atccttttaa ggtaattaac
    13141 tctttatctc ctggtcctgc tccgacgaaa tgtacttctg ccattttctt cactcctcta
    13201 gttttttaca gccaataatg acggttggat tttgtggttc aaaataatga cctgctccaa
    13261 gtttatgcca actcgaaact tggatttgtt tcatcgttaa ttcactcact gttaattttt
    13321 ccaaatggtt cattgcagtt aacgcatttt caagcaaaat aaaattaagt accaaaccgc
    13381 ctcccgggtt caaatgtgcc aacgaccagt cgataatatc ggttaaattg ccaccacttc
    13441 caccaataaa aatagcatca aatgtttcct tttcaggcaa ttcaattggc gcgtatgctt
    13501 cgataactgt tacattttct aatccaaatt tcgcttgatt ttgtttaatt aaatccactg
    13561 catctgggtt tcgttcaatc gcagtaactt ggattttcgg gaaattacaa gcaacttgaa
    13621 gaccaacgct cccagtcccc gctccaacat ctagtaattt ctttgacgta tcatctaagt
    13681 taagtaaatc aatgcttgcc gctcgcactt ctgcttttgt catcggtact ttaccacgaa
    13741 taaaaacctc atccttcatc tacaatcacc actacattca tatcgtattt ttttgctact
    13801 tgttctggtt tcaacttatg aattcgttcc tcttttgaac tcaaattttc tccaataaac
    13861 aggatttttt ttaatccacg ttgtaaaatt tcagcagcga tttcatatgg accaatgatt
    13921 gtatctgtta ccatcgcgac tttttcgtgt tgtaacaaga agtcgaagtt tggcgtttta
    13981 ccgtggctgc tcgtaataaa acagtcattc atcggtaatt gaattcgatg aaacatcatt
    14041 tgaatcgcac taattcccgg aacaatccgg acatcttctg aaaaatttgc cagcgcccag
    14101 ttgccaatcc catataatag tggatctccg gaagctagaa taaccacgtt tttgttttga
    14161 tgcgggatgt ttttcaaatc tgctagtttt tttggcaaaa gcattggcgt tgctgtcgtt
    14221 agttctgtga tttcttgtaa ttgtcttgtt gatccataca ctatttcggc ggtacttaac
    14281 acttgttttg cttcgtttat taccaaattt gtatctcctg gtccaatccc aactactgta
    14341 atcatcgcca ttcctcccgg agtacatcga tatctttcgt tgcagcaagc aacccacgtt
    14401 cggtcgaaaa agtaactaca tcgacttcca cactaggttt cgtgaatttc aaaaatcgtt
    14461 ctgatcttgc tttgattttt tgcacaatga cgtcatatac ttgggtaaag ccagcttctt
    14521 caattaattc gcctgctgcc tctgtcgtat tgcacttctc cactgcttgt aaaagcgata
    14581 acggggcgcc gagcaaagct aaattagcga ctaaaatttc cgcccgcgca tctgcatctt
    14641 tactgtacgt cgtaaaaatc cctgctgaaa ccttcaccaa tttgccaaaa tgaccaacca
    14701 ttagcacttt tttgaaagct agacgctgtg tttcttttaa catataacca acgaaattac
    14761 tcatggaaac aatatttccg cttgaaaaac caagcgtatt ctgaacaaaa tcatccccgt
    14821 aattaccggg aacaagaata atttggtcga gaccttgatt ccgtttcatt tcaagctcca
    14881 tcgataagga ttttttccag ccttcatccg acataggggt aacaatgcca gtcgttccta
    14941 aaatagaaat tccaccgata atccctaagt tgctattcat ggttcgtttc gcgcgctctt
    15001 ctccttctgg tgcatagact agtatctttg caccacgatt ttcgccaagc gattcgcgta
    15061 cggttgctaa aatatttttc cgcggtgccg gattaatcgc cgcttctccc actgcaacag
    15121 aaattccttt ttgtgtagcg cgaccgatac caacaccacc atctaatacg acttccgcgt
    15181 tatcggttag atcaacatct acaaaaatcc acattccgtg tgtcgcatca atatcatcgc
    15241 caccatcttt ttgaaccgct gctgtggctt tgtctttcga aaacttttga tacgccacgg
    15301 ggatttccag aatcgttccg ccagtagttg tgacttgtac tgcactcact tcttcttgcg
    15361 ttagaatcat ttccacacaa gctttagcag cagcagccgc acacgtacca gtcgtatagc
    15421 ctttacggta ttttttgccg ttataataaa taaaatcttc cattactcgt cgccttcttt
    15481 acatcgtaat caagattgca ttaatgatag ctgcagcaag attactaccg ccttttctac
    15541 cgcgtgcgac aatggctggg atatctgttt ctaaaatttc ctctttacat tcagccgctc
    15601 cgacaaaacc aaccggtact gccactactg catctgcttg caattcccca ctttctgtca
    15661 tctcgataat tttatacacc gcagttggcg catttccgag gacaaatagt ttcggtccat
    15721 cttttaaaga agcgagttta attccagcca tagagcgtgt aatcccatgc tgtttggcaa
    15781 tctccatcgt ctctgggtca ctcacataac aatgatattt acacccaagt tcatctaaaa
    15841 gtcgtttatt aattccacta agtgccatat tcgtatccgt gaaaatagtt cctttatttt
    15901 gaagaacatg aatgattttc gcgatggcat cttgttgaaa aacgaggcta tctaagtaat
    15961 caaaatctgc cgtcgtatgt attgcacgct tgataatcgc ttcctctaac ttgttttgaa
    16021 atgtgtaatc tggacgaata tcattaataa tttgttgaat aatttcaaag cttttctctt
    16081 caattttggc tggattctta atatagttca tcttgccact cctttaaaat aatagtagat
    16141 aaatacttgc aaaaatgata aaagcgatcg ttgaagccgt atatagcaaa tgaatcgttt
    16201 ggctaatttc tttttctgaa acgggtttat ttccacttcc aatggttggt ttaatgactg
    16261 tttcaccgaa gtactcatgc gttccaccaa gtgtgattcc aagcgctcct gctactgcac
    16321 cttcaggata agcgcaatta ggactcgtat ggtttttccg atctcgaagc ccgatttgcc
    16381 aagaagcacg cccgtcatac cttaaaataa aacttgcaat gacaaggaaa aaccaagcta
    16441 atctcgctgg gataaaattg gcaatgtcat ccattttcgc ggaaacaaaa ccaattgcgc
    16501 ggtatttttc gtttttataa ccgaccatcg aatccagtgt attaaccgct ttatacatca
    16561 aagcaagtac cggcccacca atgaataagt aaaaaagtgg tgcgataacg ccatccgctg
    16621 tattttccgc cacagtctct atcgtcgctt tactaatttc ttctgcggtt aacttatccg
    16681 tatcccgacc aacaatcatt cccacttgca ctcttgcagc agccaaatcc ccgtccgcca
    16741 aggtccgctg tattttccga gcctctttcg caaggcaagt catcgcaagc gtcgtatagc
    16801 ctaagtaaac aaaaacagct atgtaaagcc agtaagcaat tttggcacta agaaatagaa
    16861 tgaaccagga tacaactcca gtcataccaa ccgtgagaac aaatagcaat ccaccggcaa
    16921 aatacagtga tttaccatga aagatttttc gtaaaataat agtcaaccac ttaatcaagt
    16981 tgccgatcgc tttaatagga tgcggccagc tatatggatc acctaataag caatctaaaa
    17041 tgaatgatga cgtataaaat aacaatatca tcgctctatc gctccaaaca tatgcgttat
    17101 tatcaataga ttttgataga aatggatatg caggtaacta gcgaacgtat tacctttttg
    17161 ataaccgccg tgccattctt tgacaatttt gccatcccgc tttttcgtta atttcatacg
    17221 tgttggttcg gtcgtttcaa aaacagaatg atgaaattca tgaccgcgaa tagctgtccc
    17281 ttttttacca agtagtgtgt cttctaaagg ttcggcgata cagtagccaa acttccgaag
    17341 ccgcgttgtc atcttactaa ctccatcaaa aacccctacc atttcatagg attcagcttc
    17401 catttctaaa ctcgaaccaa gatacatcaa tccgccacac tcggcatata ttggcttgcc
    17461 ttgttcatgc gccgccaaaa tcgattcgcg cattgacttg ttcttcgcta gctgttccgc
    17521 aaaaacctcc ggaaatccac caccgatata aataaaatca gcgtccggaa cttccctttc
    17581 ttctagcgga ctaaacggaa tcagtgtggc tccagttgag cgaataaaat ccaagttatc
    17641 ttgatagtaa aaatgaaatg cggcgtcgag cgcataagca acgcgcactc ccgaaaagtc
    17701 cggtacttgt atttctggtg ggtgtacggt caatttcgca ccagtcttac taattgctaa
    17761 caacctatct aaatcaacat gttccgcaat caaatcacca agtaactccc atttcgtttc
    17821 taattccgtc atttcctctt ttggcactaa tccgagatga cgttctggaa gtgccaccgc
    17881 cgcatttttc ggcaaatacc ctaaaacagg tacatccgta tagcgttcaa tcgccccttt
    17941 tatcaatgaa aaatggtttt ctgaagcaac gcgattaata atcaccccag caatggttaa
    18001 ttccggatca aaacgattaa atccatccac aattgccgcc gcagaagtgg atatcgcttt
    18061 accatccacg actaaaatta caggcgtttt cgtgcattta gcaataaaag atgtactcga
    18121 attatcacga tcaataccaa gtccatcaaa aagacccatt acaccttcaa tgacggaaat
    18181 atccgccgac tctccgtgct tttgaaaaag agtagctagc atcgcatcat catctatcag
    18241 aaaactgtct aaattgatag aagcaacgcc tgttatcgct tgatgataat ttgtatcaat
    18301 ataatctgga cctactttaa atggttgaac ccgcagacct ctttttttta gcgcgtgcat
    18361 aattccaagt gtgatcgttg ttttacctgt accacttgat gcagctgcaa ttaagatttt
    18421 gttcatcttt tttcaccttt cactttagcc ataaaaaaag acgccaaaca gaacattggc
    18481 gtctttttga gatttacgca aataagctat ttccttgtag cacaaagaaa cttccccatc
    18541 gtgaaaatct acttaatcaa gacaactcgc tcccttagaa gttgtttttg gatatcgaat
    18601 ataaaagcgg tctcctgact taacatcatc ctactcacca gtcttcccgg aattgcttcc
    18661 agtgacatat gtttggtttt cgtccgtatt acagtagcta gggcctgtag aggattttca
    18721 cctctttccc ggattaatat attcacctat ttagttgttt agtacccggc aattcgtctt
    18781 ttccagcgtt ctggcaatac ttggtaaacg acttctgcga caaaaatgtt gcaaatcgaa
    18841 ccaatagcaa gcactgggaa caaaacaaac accgcttgat gcattaatgg ataaagtgca
    18901 agtaatgata atggacaatt aaaaacaaaa gcaacaatac tagaaacact aaccgcaact
    18961 aattgattct tttctgctag tttttggcgc gtaaagccat atgcaatcat cgttacgccc
    19021 atcattccag caacaatcaa atgaattggt agtgtgagcg gaaaacccgc tagtaatgct
    19081 gatgttaaat gaccgaaaat cccaagcact gctccgtaca tcggaccaag cagcaaagtc
    19141 ccaataaaag ctggggctgc gtcaaatgca actgaaccca ttaattttat gtttgcgcca
    19201 attacacaca ttgcaatcaa catcgcacat aagactaatt tttgaatttt caattgaaaa
    19261 gatcaccctc tcatgaaagc gttatttcca tttcattata tccctgttaa accactggta
    19321 caaggtcact tagagcactg aaaacaaaat agtgcaagct tttaaaatcc ctttttttct
    19381 gttttatatg gcaaaaatag ccaccagtgt gaactttttc tcaatttcta tttttgagat
    19441 ttaaaaaatg acaatatttt gttataaaaa agaatttatt gttctattta aaatgcagga
    19501 ttaaacgtta tttaaagcga ttttatggta taattagtgc agaaataaaa cagggaggga
    19561 aggactttgg agaaagaaaa agttgtaaat attcaacctt tgatggatag tcaagtagag
    19621 agccaattca cccaacaaat tcaagaagat ttcaacaaaa aaaatccaga tcactctgcc
    19681 ctacttcatt cacttgaaac cgttgaagtg cttgatgttt taagcgatta ttactctgca
    19741 catgaaaaac aaaaacaacc aagaaaagaa accactagcg taaacaaaac tggtaaagag
    19801 cataaagaaa tcaagcaagc tattcgttac attaaaaaaa acattcaccg ctccatcaca
    19861 ttagaagaag ttgctaatta tgtctatcta agcccgtttt atttaagtaa attatttaaa
    19921 aacgaattaa atattaattt tattaattac gtcaacgaac aaaaaatgct ctatgcgaaa
    19981 gaacaactag aaaaaagtga ctgggcggtc catacaattg ctaaaaattt aggtttttca
    20041 agggcaagtt atttttgcaa agtctttaaa aaagaattcg atatgacacc aaaagaatat
    20101 cgcgactcct taaaataaaa aacgatttca gccaaagccg aaatcgtttt ttattattat
    20161 tatgactgcc aatcagccgg ataagtaaca taaataaatc ttgcttcacc agttacggaa
    20221 aacttgattt ggctaccttt tggaatgaaa ataatttctc ctggacctgc tgaaacagtt
    20281 cgaccatcaa tgacaacatc tagtctgcct tcgataatgt agtctacttc atcataatcc
    20341 aagaaccaat cgaaagttgt atctttcatt tccattaaac caaaacctag acgtttactt
    20401 tcttctagtg ttactaagtc ttttgtataa acaacatcgc taggatttcc tgtgtctaat
    20461 cgatcttcct ctgaaacttt tactacagga agtttcaccg atagaatacc acttggatca
    20521 acgtgtttgg aactttggcc cattttttct aggacaactt gttttactag ttgctcaatt
    20581 aattctttac taatatcagc cattatcttt caccgccgtt tgttcttttg ctttattttt
    20641 cttcatcatt cggttagcca tatagatacc gacagctacg gcagttactc ctccgacaag
    20701 ttttccaaca atcatcggga aaatcatatc ttgggcaacc ccagctgtga aacctagatg
    20761 atcccctaaa acaaaggccg cagatacggc aaaagcaacg ttaataattt taccgcgctc
    20821 atccatatct tttagcattt ggaacattgg gatactattt gcaagtgtcg caaccatacc
    20881 agccgctgca acttcattca tacctagcaa tttacccatt ttcataagtg gtttattgaa
    20941 cacttttgta ataacaaaaa ctaaacagaa agctcctgct agaactagtg cgataccacc
    21001 aacgatttcg ataccttcgc caattggtgc aattcctgga ataatagtta atccagtaag
    21061 ttgttgaata gctccagcaa ctagcccaat agtagcaacg attactaccc cttttccaaa
    21121 aatcgtgaag cctttaatca tgccttctgg tttgaaccaa aggcctaaca taataagggc
    21181 agctacaaga ataattggta ctaagttttt gaaaatcatg attggagaga atccagctac
    21241 aagtccaccg attaaacaac caattggaat cgtaataata ccagataata cgccagttgc
    21301 taaatattta tgatcttctt ttttaataat tcctagtgct actggaatcg tgaaaacaat
    21361 agtaggtccc atcatggatc ctagaatagc tcccgcaaat agaccagcgt cgggagttag
    21421 cgcaagttct tgagctagcg caaaaccacc catgtcattc gcaagtaacg ttgttgcaaa
    21481 cattgccggg tcagccccaa gcgccgtata aattggtaca acaatcgggc ttaaaatttt
    21541 tgctaaaact ggcgctaatg taatgatacc gaccattgct agcgttagcg atcccattgc
    21601 cataatacct tcttcaaatt gtgcacctaa gccaaatttg ttgccgataa ttttgtcaat
    21661 agctcctaga atcataaaga ttaccattaa ataaataata atttcattaa tgctcaaaag
    21721 tgttcctcca ttctatagat agcgttttaa aagttcatca ggagaaggaa tgaccgtatg
    21781 atgtatcacc ttttttggtt cggcggtttc gattagaatc cgcatccctt cttgaatagc
    21841 actaacttcc cctgtaaaaa cagccacaaa tttcccacca atcgaagcac cgagcgtcat
    21901 gcgtttcaaa tgaatagccg attttttcag cgcttcattt actgcattta gtccagcgcc
    21961 caactgactg atttcgataa ttcctactgc gtcaacttcc actttagggt gtttattgtt
    22021 tagaaaagca agtaattctt cgtgcgccat atgcaaaata taagaagaaa catgaaattt
    22081 gccagcttct tcttttgcat cttgcatcgc actagtaagt tcaccggaag caccttgcaa
    22141 aataatcaaa aatttaccag gacatgtcgg acgaaaagta aataaagtta cattgcctgc
    22201 tttcaagaaa acatcggcca tttcgtaccc tttacttata ctcctgagtt caagaatacc
    22261 taaggactgt tcagccataa cgttctaccg agtcgataat gccgacgata catgcgtcca
    22321 ctgggatcgt gttgtcccca gtggatgctc gtgctgcgct accagttgta acgagcacaa
    22381 gatcgccgtt tcctgctccg gcattatcag ctgccactat ggaatgtctt acatcttccg
    22441 tttcatcggt acaaatctct actagtagta gttttaaacc attcagtttt tcgtcttttc
    22501 ttgttgccca taaactcccg gtaacttttc caatttgcat gccgctcttc cttcctaact
    22561 ttctttaatg ctaattcgtt tttcctgtaa gtaatctttt gcaagtggtg ttaagaaact
    22621 tcctttaggc aaaatgaatt cgcttttgtt cttagtaagt ttttcaacat cctgttcggt
    22681 gatgacttta ctttctttgg tctcttttac cggactttcg ataaattcga caccaaatcg
    22741 gctcagtttc tcctcatatt cttgaaaaag ttgtctgata ccatatttag cggaacgttt
    22801 ataagcatgc gctttgatac cactcttcat tatccaagtt ggccgccctg ctaaaagatg
    22861 atctgtaata aattgttctt ttttattcat cggagcaaac aaactgattc gagctaattc
    22921 agcgatatcc aattcttcca gtagtaaaat gtcacaagcg cgttccgaac gatcataaag
    22981 cgaaacttga tattctttta gataacactg tctgagagtg tgttctgaat cttgtcccat
    23041 gataatcatt tttttctctg gaagttgtaa tcgtctcatg acttcctcag tgacagcttt
    23101 tatgagtgcg tctagttcca tactcattta gcctttgttt tcttgattat ttgacctcga
    23161 attccctttt taaaaccaca tgcgttggct tcgtcataat caatgtgcat atatgtagca
    23221 aaatcagggc taatccgaac aacaacatca tcaaaaatta gtggtctgtc accgttaatt
    23281 ttcacttgaa caatttcact ttgggatact tgttgttttt ctgcatcagc aggcgtcata
    23341 tgaatatggc gttttgcaac aataagtcct tctgataatt gaacactgtt ttttgcggat
    23401 aatagtaaaa ttcctggtgt ccctgctatg tctccacttt cacgaaccgg tgctttaatt
    23461 ccaagcgccg taccatctgt ggagcttatt tctacttgtg tttttttacg gattgggcct
    23521 aaaattacaa cgttatgaat aacgcttttt ggtccaacga tgctaattct ttctttacaa
    23581 acatattgac ctggttgaga taggtcacgg aaatgagtaa gttcataccc aggtccaaat
    23641 agtgcatcga ctgtttcacg atctaaatga acgtggcggc cggatgcttc tacttctacg
    23701 ccagtttcaa gtaacgcacg gcgagtgact tcttcaataa ggcttgttat taactcatta
    23761 ttcatgaata agcctcctta ctttttatat tcacctgttc tcacgcggaa catcagtatc
    23821 cagaataaac tagacaatcg gttaagcgct tgaatgatgt ctggtcgttt aatggaataa
    23881 tcggcttcct taaatgctaa aaaggcagct aattccgttt cgcggaccat cgttcttatt
    23941 ttgtttaatc gaatgaccgc attccccatc gtgtaatcag gcataaaatg tgtcatttga
    24001 tagtattttt tcggattatg actacgttcc cgcagttctt tttcatccat tccaagcaaa
    24061 tgaactgatt cgatttgctc gtttaaaact tccgatcgta caatatttct tacaaaggtg
    24121 aggatttctt gtaaatcttc cgcaagatct ttaaactcag ctgcaacgga acattgggtt
    24181 tccagaattt cagcttccag tgtatctaat tttccgcgga aagcgatttg tggatggtct
    24241 ttaaacacaa gcaggttacc acgcaaatgc gtcatatgtt caggcttctc atctaaggct
    24301 ccaccataaa tcgtttggaa ttttgctcta gtagtttctt ttttcactgg ctccactact
    24361 acttttgttt ctgcaatttc atcaatataa tgaaggtcaa ttttcttttc agacaagaaa
    24421 ctcttagctg aaggtgtgat aattgtgcct ttttttatat caagtttttt ggttgttttt
    24481 aaatcggtgt gtaaataggc ttttcgtaac tcatcttctg tcaaaatagc caaagaacca
    24541 catccttttg tcccatttac aattggtgtt agtaatgttg ggaagctttg tattgcttaa
    24601 atctggtaaa aagcgaaagt ttcgggcaat ttccgagtct gatggaaccc ttttgcctta
    24661 cgctcacgct ttttcctgat ttatgttaaa agttagtctt attcagcgct ttttggtaga
    24721 attgcgtcta cttcgctgtg tggacgtggg attacgtgta cagatagtaa ttcaccaacg
    24781 cgttctgctg ctgctgcgcc tgcatctgtt gctgctttaa ctgcgccaac atcgccgcga
    24841 accataactg ttactagacc gccaccaact tgttctttac ccataagtgt tacgttagct
    24901 gctttcacca ttgcgtctgc tgcttctact gctcctacta aacctttagt ttcgatcata
    24961 cctaatgcgt ttgcgtttgc cattttaaaa ttcctccaat tagtgtttta ttttttattt
    25021 taattctgct aaaacttttt cgactaaact ttggatgagt gcgtctgcat caaccggaag
    25081 ttcagatgtt gcttggtttt cttctttacg aatatcttct aactctaaaa cgccagtagc
    25141 gatgcgacga atgttgaaaa gattttcagg tccgatatta tcagatgatg aacttcctcc
    25201 aactgcccca caaccaagtg ttaaagcagg tacaagattt gttgttgcgc caattccgcc
    25261 aagtgctcct ggtgtattaa ctaagagacg ggaaactggt tttttcagtg cgaattcgcg
    25321 aatgatttct ttatcttcag agtggatgat taaagtatgt ccagctcctt catgataaag
    25381 aatatccatg ctaagttcac aagcttcttg ccaagtttcg gctgtataga acgccaagat
    25441 tggagctaat ttttctcttg aataagggat tttagcgcca acttttgttt cttcagcgat
    25501 aagtactctt gcgtcagctg gaacagttag accagcaagg ttagcgatat gttgcacgct
    25561 tttacctacg attgctggat tcatcgaacc atttggacgt aagatgaatt taccaagttg
    25621 aacagcttct gcatcggata agaagtgtgc tccttgtttt ctaaattcag caatgacagc
    25681 ttctttattc acacgttcca caacgacaga ttgctcagat gcgcaaattg ttccgttatc
    25741 gaatgttttg gaatcaagaa tatgtttcac tgcgcgagga atgttagcac tgcgttcgat
    25801 aaatgctggg ccattacctg gaccaactcc aattgctgga gtaccagatg aataagccgc
    25861 ttttaccatt gcagatccac ctgttgcaag gataactgct gtatctttgt gtttcatcag
    25921 ttgatctgtt ccttggatgg ttggaacagt catacagctg atagcgcctt ttggacaacc
    25981 agctttttct gctgcttcac taatgattct tactgtttca agaattgctt ttaatgcgtt
    26041 tggatgtgga gaaaatacga tactatttcc ggctttaatg gaaataagtg ttttgtaaat
    26101 aacagtggat gtagggtttg tagaaggaat taatcctgct actacgccaa gtggaactgc
    26161 aacctccatt actttctttt cgttatcttc ttttaacata ccaatggttt tcatatcttt
    26221 gatgtaattg taaacatgtt tcgacgcaaa gacgtttttg attactttgt cttgccaaat
    26281 tccgaaacca gtttcttcat gggccatttt cgcaagtttt tcgcgagcac cataaccggc
    26341 atcagctatt gcttttacaa ttgtatcaat ttgttgttgg ctcattgcag caagttcttt
    26401 ttgtgctttg ttagctgatt caatgaggtt acgaacttct tggattgagc gtaaatcttt
    26461 atcttctagt gccactagtt ttcactcctt ccataaatgt cttttagtgc gtgaacaagt
    26521 ttatccttgt tcgcatattt aatcttgctt tttgggatag gcacattatt taatgtgtaa
    26581 gcaagtttcc ttagatcaat aactttcatt gcgcgaagtt ttttctctgc acttttcgtg
    26641 tttgtgttca cttctacgac ttgttgaata acttcttttg gttcttcttg ttcgacttct
    26701 tttggttgtg ttttaacttc ttcttgagga acaaaaagtg cttttgtatc ttcgctcatt
    26761 cttgcgataa catggcttga tactaaacaa cctaagtctt ctgttgcagc tttccctgct
    26821 tcgatagctg catttactgc acctacatca ccagttaatt caaccgtagt taaaccacca
    26881 cgaatgactt cacattgaat cagttcgaca tttgctgctt ttaaacaagt atcggcagca
    26941 acaacagcac caagaaaacc tgtgacttca attaaaccaa gcgcttcatt tggcattttt
    27001 tagcaccacc ttaatattga agtggatttt cagccacatt ttctactgcc attttgaacg
    27061 catcacaagc tgctttacat gcagattggc taccagtcaa aagtgctccg ccgaagtttg
    27121 tttcggatgg tgggccatag aaagctccga ttgttacgtc tgctgctttt agtgctgcat
    27181 ctaacgcata catagcttca agtggagggg cgattaagta agcaatcgct tcaccttctg
    27241 caacattcgc ttcttttgaa aggaatgtac cagttcttga aacacagtgc gcgaagtaag
    27301 gaacactatc atcttcattt gcactaacaa agctagcgcc attttcgatg aaatctactg
    27361 ctacagaaag accacttttt acttccgcag ggcttggtcc ggcgataata ccgataactt
    27421 caccagcgaa ttttgtggat gcatttccag caccagcata catacttttc gcataaacaa
    27481 catctacttc tgctgctttt gttgcttcgt caagcgctgt ataagttaca tcatcacaat
    27541 cagatgtaat aataccaagg cttctttgat gcggttttaa gtctaattgt ttaaatagac
    27601 cattatctac gttagataca actttgacac ttaaaacgga tgcaggtaat ttatcatttt
    27661 tcatgaagtt tcctcctcta actagcttat tttaaatcaa taccagaaca ttttttctca
    27721 agcatattgt gaattaattc agcaatgtat gctcctgctt caactggtgg agttccgccg
    27781 ctatggatgt tagaaataac agtacgacga gcttctggca taccaattgt tggtttgtaa
    27841 gcaatatagg cactcatgga ttcagcagtg actaggcctg gacgttcacc tacaagtaag
    27901 caaactacgt cagcgccagt gatttcaccg atttggtcca tagaaggtac acgacaatgt
    27961 ttaacgaaaa taatgttatc aaaatctaag ttatacattt tcaaaccttg tttaatggat
    28021 ggcaagatat ctttgatgtt agcttcaatt gccgctgagc taagtccatc accaacaacg
    28081 atttgaagtt tggcgttttt tgtcgtattc gcacgaatca cttctaccat ttcgttgtca
    28141 aattcacgac ctaagtctgg gcgagttaag tattcatctt tatcttgaca tttagtgttc
    28201 actgggatga agttcatttc ttttactaaa tcctcagaaa cgtaagagaa aacggaatct
    28261 tgtgctacgg catggtccgc acggaaacga agaattgttt ctgttttgta acgtggacca
    28321 gcacgccata aaccaagtcg agccggtgtc atttgtttca ttttcaaata accttcacga
    28381 tcagctggtt ctggtactag taattgtttt ttgatatcta cttcagtaat atccgggatg
    28441 ctaccttctg ttataactgt ttcaactaca gatttagttg gcgcagctgc tactgtatcg
    28501 gttgttttac caccggacat ttctgttaaa atgccttcaa tcatttgttt taattcttgt
    28561 tcgttcatcg cttagttcct cccttcctta ttttaggaaa atagatgcat ctccagcacg
    28621 gctagttaat ttaccatttt cgctgaatcc cattttttcc atccactgat caaattcttt
    28681 aattggtttt aagccaaata attcacgtaa agtggctgtt tcgtggtaac cagttgtttg
    28741 gtagttaagc ataacgtcat caccatgagg aatacccatg ataaagttac atcctgctgc
    28801 agttagaagt acggacaagt tttctacgtc gttttggtcg gctttcatat ggttggtgta
    28861 acaaacatca caacccatag agataccagt taatttaccc atgaagtgat cttcaaggcc
    28921 agcgcgaatt acttgtttag aatcatataa gtactcaggt ccgataaatc caactactgt
    28981 atttactagg aatggatcaa atttcttcgc gaatccataa caacgagctt ccattgttac
    29041 ttggtctacg ccgaaatgag cgtcagaaga aagttcagaa ccttgtcctg tttcaaagta
    29101 cattacgttt ggtccagtcg cagcaccact ttgaagggct aattgtctag cttcttcaat
    29161 cgttgctccg tcaaaaccga aagctgtatt acctttttca gaacctgcga tagattggaa
    29221 tacaagacca gttggagcgc cgcgacgcat tgcttccatt tgagtcttca cgtgtgcaag
    29281 tacacaagtt tgtgttggca catcccattt gcttcggaat tcttcaaatt tattaagtaa
    29341 acgaacaacg ctatcagtag aatcatctac tgggttaagt ccgattaccg catcgccaat
    29401 cccgtaagtt aatccttcca ttaaggaagc aaggatacca tcaggatcat cggttggatg
    29461 gtttggttgt agtctagcgg agaaagttcc aggaagaccg attgttgtat tcgcatgtgc
    29521 gattacacgg atttttttcg cgccataaat taaatctaga ttggacatta attttgtaac
    29581 agcagcaata atttctgatg ttaggccgcg tgcaacacgt ttaatgtcag catctgttgt
    29641 tttatggtct aaaatccatt cccgtaattc ttccactgtc cagtttttga tggaatcatg
    29701 gatacggtca tttacttggt cttgaataat acgcgttacc tcatctgttt catatgggac
    29761 aaccggatta ttacgtaaat ctccaagcgt cattttagaa agcaccactt ttgcagctac
    29821 acgttcttct gcagattcag cagcaactcc ggctaaacgg tcgcctgatt tttcttcgtt
    29881 tgcttttgcc aacacatcag tgatggattt gaactggtat gtatggccga ataaattcgt
    29941 ttttaaaatc attcgataaa tcctcctctc aaaattaaag ctatttatgt ggatcagtta
    30001 aagactaagg ttttaactac tactggtagc actttcccgt cagcaactgg ttttcctata
    30061 tcaatataat caccattatc gactttgaca ctatccaagc aaattagtgg atgcccggct
    30121 ggtaaatgcc cgaagatgct ttgtccgagg gcttttgcca tgtcgtgcca tgtaatgata
    30181 attaagggat gaccaagtgc gattggttct ttcattcctt cgcaaatggc tttcgcatat
    30241 tctgttactt gctggaaact tgggctattt tcgccttcaa ttgcaagtgc aatatgttcc
    30301 atttcattct ctattttgaa ccagctaagt ttttccttga tgacttctgc catattttca
    30361 tcttcttctt gtttggcaag tttcaaaatt ggaatgtttt ttactgggaa aattttctcg
    30421 gtgtaagtaa tcgtactacc gctaatttca gctgtgtgtg aaccggctcc gaccactgtt
    30481 gcccgtatgg tttcgacaga ttcgatatac tttttttcag tcattaaact agattctgca
    30541 atcgcttttc ctagcaataa cccaatatct ccatatctaa aaggatcact tagcgcaccc
    30601 gttgagatgc agtctgcaac gcctccggaa aaagagatac attcaatctc cgttaagaat
    30661 ttcaatcctt tattcgtaat gattgtttca taaaaatcat ttggcgcccc gaggccaaca
    30721 ctattcttaa gcagctcaac catttcacct aaaacgggtt gcaagttttc tggtgaagtt
    30781 gtttcaccaa gtttaaccgg ataacctcgt ttttctatta aagcttgaat ttttggagca
    30841 atataggtga tttttcttgt ttcacggtct actttaatta accgaccacc aatatctaag
    30901 caagcagtat caatgagttc tccgcgatca aacagcgata agttcgtggt tccgccgcca
    30961 atatccaaat tcacaacaga ggtattattc tctttggcat aggtatgagc acctgctcct
    31021 tttccagcaa tgatgctttc taagtcaggt cctgctgttg ctacaacaaa atccccagca
    31081 aaaccactca ttgcatctaa tacattgctg gcgttatctt tacgagctgt ttcacccgtg
    31141 ataataactg ctcccatgcc aatttcttct tttttaattc ctgcattggc atattctttc
    31201 gttacaaaat cacgaatcgc ctccacatca atcaaattat cagcaagaat cggtgtgaac
    31261 agaatctcac ttctaaaaat aatccgctta tctgaaatga caatacgcgg cacggtgaaa
    31321 cttgatgcca tattttgaat ttctaactcg gataaaatga gttgtgttgt cgacgtacca
    31381 aggtcaatcc ctacacttaa aattgtttcc gtcaaaaccc tcactccttt ctagcaaaaa
    31441 gaaaaagctt aaagacaaat aacagtatcg ttacttggct ttaagcttca tcgctttttc
    31501 atagctactt ctttgtagca tggatagaat tgtatttaaa atcaaacatt gttttcgttc
    31561 cgtgttcatt cgattcaatg gttactttgc ctcgaagttt atctttaatg taacttttga
    31621 caatggaaag tcctaggctt ttttcggaca ctttacgaac gttgaaccca tgaccgttgt
    31681 ccgttacttc tgcgtgaata atatttttct cttcttttat ttgtagtaaa atttcgcctg
    31741 attcatttgg atgaaatgcg tgatcatagg agttttgtaa gagttcgttc atgacaagcg
    31801 ccagtgccac ggttcggtca ctgtccaaat aaatgcgttt atcaatatcc attcttacag
    31861 ctacttttgg acaatctgta caacatcttt caatattgta ggcgactgtt tcgatgacca
    31921 tataaaggtt aatgccgtct tccatttgct tcgataaaag ctcgtgtgtc gctgcaatgg
    31981 caaggattcg gctgacactt tcatttagaa tcttctgtgc ctccacactt gtagaacgtc
    32041 tgccttgaat tcgcaataag gaaacaacag attgcaaatt gtttttgaca cggtgatgaa
    32101 tttcacgaat agcaacggat ttagaaacaa tttctgcttc tttcacttta atatccgtga
    32161 tgtcatgcaa gatgagaata aagcggcatt cctgctcgtc ttcttctttt acaaaaatct
    32221 gcttcataat aaagtaattc ccggcgataa ccacttcttt ttttaactga atcggttgtt
    32281 ttccagtttc aatttgatac atgattgcgt caaacatcat ctggtcgagg gataaattat
    32341 cataatgcat gccttggatg tcttccatat aaccaagtct ttcgtaatac tgatccgcag
    32401 cgcaattctt ttgctgcaaa atcccgtttc ggtcaaaaat caaaatggca tcatctagtt
    32461 gatcagtaat tgaatccgtt agtttactca tggcagacag cgtggtagaa acatctcgat
    32521 aagccgtttc ttcattgtca atttcaaaat gagctttaat ttcggcgcta atatcatttt
    32581 ctagaattag cacggcaata actcgctgtt tattacgaat cggataaact ttttggcgaa
    32641 ttaatacgtt ttcttgtgtt tttgcaagta gatcgttaga gttcatacct gtttccaatg
    32701 ttctaagtac acctggctca ttagacctta gggctgtttc tccgactact ttgtttttgt
    32761 aaagtgattt ggttgttttt ggtggtgtat gatgaataac aagtgcttca ctagttagct
    32821 tattgtatac atcaataaat acatctacat cttgatacat ggctgaaaca cttaacgact
    32881 tggctgtgtg aattaattct tcaatatcgt gctccgataa atctgtgtag cgtaagcaca
    32941 tttctcgaat cgttttagtc atcgctcatc acaatcgttt ctgcgatttc catcatcgga
    33001 cagcgtttgt ccatgctcag gttacgaatc atattgtaag cttcttcttc tgtgatgttg
    33061 ttctcaatca taagcacacc ttttgctttt tcaatcactt ttcgttcttc taattttttg
    33121 gtgagctttt ctaattgctg ctctaatttt cttgtttctc gccctttggc aatactcatt
    33181 tcaacagttg gaatcaaact tttttcatca agtggcttta ctaaataacc taatgctcca
    33241 aaccctttag ctttctcggt gtttttcgga tcactaaaag cggtaagtaa gataattccg
    33301 ccagcaaggc cttctgaaat aattcgtttc cctgctttta agccgtctaa gagtggcatt
    33361 tgaatgtcca tgataacaag atctggctga tggcttttgc aaagttcgat tgcttcaaaa
    33421 ccatctgtcg cttcccctac aacattgtag ttcgcttctt ctaagatgtc tcggatgtcc
    33481 attcttgtaa taggttcatc atcggctatt acaattcttc cattcattcc tgtcacgtcc
    33541 tcttcttctg ctattgattg attcgtcaca ataaaggaca aaatcattct atagaagcat
    33601 ttacttgagc gaaagagtaa aagagctaga gaaaaaattc tccaagaaaa tagaaagagc
    33661 cccttaaaaa tattgtgcaa tatttttgag ggagccccgt tgctctgcta tatttataat
    33721 tccacacgtc tttgtgctcg gttctattat aaagtagcat gaaaacgatg tcaataggtt
    33781 atttgattcc agttgtgaaa taaataactt ttatgccaac attttttcaa gaatcgcact
    33841 aacatctgtt tctgtcggta ttctaggatt ggttgcagta catccgtcat ttagcgcgcc
    33901 ttccgcgatt tgagcaatat tttcatttaa atctgtgcgg ctaataccac attctgttaa
    33961 tgtagttggc atattgagtt tcttttgaag ttgtttaatg gcattaatta agctacgaac
    34021 accaagacgt gtattcgatg ctggcatttt tagtaatttt gcaatcgctg tataacgttc
    34081 cgctgctcgg ttatccggat tgttaccaaa atcacttgta attccagcat tataactaat
    34141 tacgtgcggt aaaagtaatg tattcatacg accatgtgga attttaaatt tcgcaccggc
    34201 tgtatgcgca ataccgtgat ttaagccaag agaagtaatg ttaaatgcca ttcctgcaag
    34261 acaagaggca ttatgcattt tttcgcgagc ttctaaatca tttccgtctt tataagcacg
    34321 ctctaagtat gtgaatacta attggataac tttttccgcc attgcatccg agtaatcatt
    34381 cgcttttgta gatacatagg cttcaagcgc atgcgttaac acatccatac cagtatctgc
    34441 tgtaattgct ggtggaacag attttactaa gtctgcatct aaaattgctt catctggcaa
    34501 aatagcatct gtaattagtg ggtatttaat ggctttttct ttgttagtaa taacagagaa
    34561 actagttact tcggagccag ttccactagt tgttggaatg acaatgaaag gcattgcgcg
    34621 caccgtacca agtttttggc cgaagaattt catcgctttc gccgcatcaa tcgctgatcc
    34681 gccaccaatt gcaatcatca agttagcatc acattcattc aaaacttcaa ttcctgctac
    34741 cacgttttca atcggtgggt ctggaatgat ttcgctaaaa atcgtatatg tattcgatgg
    34801 atcaattttt tctgtaatcg cattaatcat tccggaacta accataaatg gatctgttac
    34861 gataaagatt tgtttgtctt taaaatcgag taaacgatct gttgctcctt ggccaatata
    34921 aagatctgtt ttaaaactaa ctttttgcat gagattacct cctagttttt ttaaaataaa
    34981 aaaagaagct ttgagtagag aaatttcctc ttccaactca aagcttcttt gctaagtaaa
    35041 cagtacgcct ttgtaccgta aaatatttta tttgtccact ttattaaaaa ccaaacccgt
    35101 ggaaatgtca aatctttttt tgtaaatagg caatgaagat acattccttg tatcactctt
    35161 ttcgtcgttg aaaagatcat tgcccaccat aaaacgaagc ggtgcacatc tttgtgcgta
    35221 tggtgcttga taaaacgtag ctcgttcagc ttctcggcac caaaccattt acagtgggct
    35281 tatttgtttt aaaaacaaat aaaaaagccc cagtgagaca actacactgg aaccaagaat
    35341 tatacatgct ttgcctcgaa gcagtataac cagttaaaac aattagataa aagacctgac
    35401 ttagagtgtc taactcctta cagtggcggg accgtgctgg actttcacca gacttccagt
    35461 atctaactgt ttgtatgaac gaattcgttt atcaaagtta ttatagcata aaatagaccg
    35521 cttgcaagaa gaatttgctt tacgagataa tttgaacccc accactgaca aactcacgga
    35581 aataatatcg actgtaaaaa gtcgtgacat agcgccgttc tagctcaaat aaaatttcga
    35641 gtggatccgt tttttcgagt tcataaagta taccgacaac ggtaccacta tgcgaaacat
    35701 ttaaccccac taaatccaag ttttccgtca cttccacaat ctctcgccaa aatggttttg
    35761 gcaaaatagt ttggttgcag gctgcactaa ctgatgcggc tttaccaagt aagtgaatgg
    35821 atttttgcgt gacggcttgt tgaaaatagt ccattccttt tgctagatgt ccttcgtttt
    35881 tgagtaattg cgcttggtga ttttcttgcc gataagtagc tgtttctaaa atggtaagcg
    35941 gttctaacac aacgacgcct agctttggca tccaattgga gctttgaatg atgtcccctc
    36001 ttaagtgatc gaacaaagtt agtgattcaa aaatagtgct atccgttggt tctagttgta
    36061 aacatagctt ggcaatttca gcttctgaga tagatttatt cagccatttt gctgtagcgc
    36121 caattgttgc ggcaatatca gcggtggaac ttgccatgcc tttcgcgacc ggaatagttg
    36181 acttcacttg taaagatact tgcgggaggt ctcttttagc cacaccaaaa tactcgcaag
    36241 tggtttggaa tgcgagccat gcttttgtat gcccggagtt atttagtcct actttatcag
    36301 ataaagtgac ttcggaatac cagttgattg ggtatgaaat tagcttctct ccgcctaaaa
    36361 tccagccttg caaaagttcg ccacaagatg ccggacacct cgctttaatt accactaaaa
    36421 atcacctcaa gtgcggttaa gagttggcga ttatcttctc tacttttcac tgccactcgg
    36481 taataattct ccgtgagacc tcggtaatta gcgcaacttc ggataaaaat cccttttaaa
    36541 agcaattttt ttcgtaaatc aaacggtttt tcgaggtgga aaaatatgta atttacactt
    36601 ggtcggtaca cggtaagcgc tgaaaattta cttaagcctc ggtataaaaa gtctcgttcc
    36661 gcattaatcc aatcgaatgt ttgtctaata taggcttcat cctctaatag catttgccct
    36721 gctaagtcag caaatgtatt aatcgaccag ggttcgcgca tttgcatgag tgcttcggct
    36781 aataagtcat tttttgtcag caaataaccg agtcttaagc ctggaatcgc gaaaaacttc
    36841 gtaaaggcgc gaataattgc taaatgcgga aatttttcta aatagttgat catcgaaatt
    36901 gtttcatttt cttctaaaaa gtccataaaa gcctcatcga taattaaata tatgtttcgc
    36961 ttttcacata aatcagcaat ttttatcatt tcttgttgcg cgatgagttg tcctgttgga
    37021 ttattggggt tgcacaaaca aacagcttcg atatccgtat cttgttcaag catttctagt
    37081 acgatttgcg ccgcagcaaa attggtttct ttcgttaact cagcataaac aatttcggca
    37141 tcaaaaaaag cacgttcgta ttccgcaaaa gtaggcgcaa gtaagagtac tttttgcgcc
    37201 tttgttactt ttgctattcc gaaaatcagc tctgtcgccc cgtttccagg gattacattc
    37261 gctaggtcga gttgatgaaa cgaggcaatt cgcgcacgga gcgccaagta atctggttct
    37321 ggatattcta ccagtttgtc caaatttgtt gttatcgttt gtttcaaact agctgggact
    37381 cctaatggat taatattcgc actgaaatcg agcaccattt ctttcgttaa tccgtgttgt
    37441 tttgctagtt cattatagtt gccaccgtga gaagccgtcg ttattttcac atcaaatcgc
    37501 tccttaactt atcgtttgtt ttgcatactt ttctacatcg cgagcaatca ttagttcttc
    37561 attggttgga ataatgcaca ctttgaccgc ttcatcatca ttgctaatta tcatatcacc
    37621 cgcattattt tttgtcacat ggcatgttac accaagataa cttagctgtt ctgttaccat
    37681 ttggcggatt aatggcgaat tttcacccac acccgctgta aataataatg cgtcgcaacc
    37741 gttcattgcg gaggcataag caccgatgta gttgcatatt tggccagtaa acatacgaag
    37801 tgttaatagc gcgcgtgaat taccttcttt ggctgcaatt tcgatatctc tgaaatcact
    37861 tgaaattccc gatacgccaa ggacacctga ttcactagac atcatatgca tcacttcatc
    37921 caagctatag cctaattcat ccactaaata cgggatgatt gtcgcgtcaa ttgtaccaga
    37981 acgtgttccc atcatcaagc cagcatttgg tgtaaagccc atggaagtat tcactgattt
    38041 cccagcttca atcgcacaaa cactcgctcc attgcctaaa tgacaagaaa taatttttaa
    38101 tttttctaaa ggtttttcga gaacttctgc tgcttttcca gccacatatt tatgactcgt
    38161 tccatgaaaa ccgtattttc gaatatgatg tttttcataa agttcataag gaagcgcata
    38221 taaaaagttt tcttctggaa tcgtttgatg gaatgcggta tcaaatactg caacagaaac
    38281 cgcatttggc agcaattcac gaaaagtttt gattccgatg atattcgctg gattatgtag
    38341 cggcgcaagg tttgtcacag cttcaatccc tttcaccact tcatctgtta caacacagga
    38401 cgtaacaaaa tcttctccgc catgcgcaac acgatgtccg acccctgtaa tttcgctcag
    38461 atcattgatt acttgatgcg ccttcagctg ctccagtaaa atctcgactg cttccccgtg
    38521 gttattgatt gctcgtattt ctttgatttt ttcattttga aaggacatgt tgaaaatggc
    38581 gtctggtaga ccgattcttt caattaagcc cttaactaaa acttcttctc ctggcatcgt
    38641 aaaaatttgg aatttcagtg aagaactccc tgcgtttatc gccataattt tgtgcatata
    38701 gctcagtcct ttctcatttt taaaggagta aacaaagcca ttcttgttta ctccatgctt
    38761 ttttataata aaatgttaaa tagtccaatg gctaagagac caccaatgat tggtccgaca
    38821 attggaatcc aagcgtaacg ccagtctgac ccacttttat ttggtactgg tagtaaaaag
    38881 taagcaagtc ttggtcctaa atcacgagct gggttaatcg cataacctgt cgttggtcca
    38941 aaactcattc cgatggcaac tactagaaag ccaaggatta atggatttaa accatctgta
    39001 aaactgttcg ctccaatcat aagtaaacca aaaatgaaag caaatgttgc gataatttca
    39061 ctgattaaat tgaaaggtgt atttctaatc gctggtcctg tggaaaaaat accatgtgta
    39121 tcaatttctg ggggagtcgc tttaaaatgc ggatagtagt gtaaaataac gatggatgct
    39181 ccgacaaatg ctccggcgat ttgcgcgata atatatggca ccacatctgc ccaagggaat
    39241 gatcctccaa ctgcaagcgc aatagttaca gctggattta aatgcgcccc gctatatgct
    39301 cctgcgacat aaatccctat cattaccgca aaaccccaac caaatgtaac aactacccag
    39361 tttgctcctt gagataatga tttatttaaa gtcaatcctg ctaaaaggcc gttcccaaac
    39421 ataattaaaa ccatcgtacc aataaattcc gccaaatatg ctgacatagt ttatcctcct
    39481 ttttaatgta aattctaaat tatttgttct aaaatttctt ttagttcttg atgtgagggt
    39541 gtcgtaggac tagttggtaa gcaagcgtct ttcagtgcat tcgttgcaat ttcgtccatt
    39601 tttgcataga ctttttcttt tgctacaccg gcgtctgtca atgtgcgcgg catttgcata
    39661 tgttccatca tcgctacaat tctttcgcga agtaagcgga cagctgtttc gttcgagtct
    39721 gatctggaag caatgccaca aatgcgtgcc atttctgcat atttttgttc tgtttcacga
    39781 tttttaaatg cgttaaaacg aatcactgca tctagtaaga tcgcattggc tagcccgtgt
    39841 ggtacgtgaa actgtgcacc aagttgatgc gcaatactgt gattcaagcc taaattggcg
    39901 cagttaaaag ccattccagc catagtagaa gcattatgca ttttttctcg attcgctaaa
    39961 ttacgaccat catcataaca gctcgttaag aaacgtaacg ttaattgcac acttttttca
    40021 ccaagagcat cggtataatc gcttgcatct ttagagacat aagcttcaat tgcgtgtgtt
    40081 aagacgtcca tccctgtgtt cgctgtaata gctggaggta ccgtaacaac cagttgcgca
    40141 tccaaaatag ccatatccgg aattagttca tctaagaaaa gcggatattt aattttcgtt
    40201 gttggatcag tgataacggt tgcggctgta acttctgaac ccgtaccgct ggtggttgga
    40261 attgcaataa aagtactgat attgattttt tccaaacgtt tggcgaaata gtagattcct
    40321 ttagccgtat caatcgctga accaccacca aaagcaatca tgacttgcgg ttggattttg
    40381 cctgcctcac taacccctcc agctactttg gaaataggtg gatcaggtac gacatcggta
    40441 aaaatatgca cattattgga tgtatctaat tgtccaatta aaccttgaag cccttcccca
    40501 tcagccaaaa aacggtcaca gataatccag acatttttat ttttaatttc ttttaaaact
    40561 tgtaaactat tcgtaccaaa agctactttt gttttaattt gaaagctgtt cattcagttt
    40621 gcctcctctt aacgaatcga aaaaccatct gttaaaacac aacggcgacg tctagcaaaa
    40681 tgacgcgctg tagtggttcc ttctccggta ggcgttgcaa tagtgaaagt agtgctacct
    40741 tctcctctaa agcctaatcc cgcaaatgaa ggaccatttt tgacaaagat ggatgtttgc
    40801 atatctcgtg cagctttatt taatctagaa atattttgtg aatgcatcgt agctgtgtga
    40861 tgcaagcctt gctctaactc aatagcgaca tcaagcgctt cgtcaaaatt aggaactctt
    40921 acaacaggaa caatcggcat caataattct acagttgcaa aaggatgtgt tttttctgtt
    40981 tccacaataa ttaaacgtgg tgaaaaatca caaacaatcc ccgcttcttt taaaatttct
    41041 gaagcacttt ttccgactag ttttttgttt gttacgcctt tatctgtgac agctactttt
    41101 tctagttttt gaatatcgct tggattggtc acatgtagtg caccattttt ttccatttgg
    41161 aacattaaga aatctgcgat gctatcaact gcaacaatac ttttctccgc aatacataga
    41221 atattatggt caaaagatgc gccgtctacg atatcagcag ctgctttttc gatgtttgct
    41281 gtctcatcta caatagatgg cggattcccg gcacctgcgc caataacttt tttaccggat
    41341 tgcatggctt gaagaactac accagggcca cctgtaataa caaggagcgg tactttcgga
    41401 tgattcatca tttcttgcgc ggcttgaata gatggttttt cgactgtaac aactaaatta
    41461 tcaatgccgc aactttcacg gacaatcgta ttcaactttt caatcaacca aagagaaata
    41521 tttttcgcac ctggatgcgg gctataaaat actgcattcc cagctgcgag catgccgatt
    41581 gtattgcaaa tcaaggtttc cgttgggttc gtgcttggtg caacagctcc gattacgcca
    41641 tatggagaaa gttcgtaaag cgtcatgcca ttatcaccag tagcaacttc tgtatacaaa
    41701 tcttccacac ctggcgtttt ttcaatcgct aacgtgtttt tcaaaatttt atctgctaca
    41761 tttcccatac ctgtttcagc aactgctcgc gctgcaatgg attcaatttc tggataaagt
    41821 gcttcgcgaa ttgctttcac aacgttgcgg cgttcttcta atgatttttc tttatagtta
    41881 ttttgtgcta taactgctgc ttgaacggcc tcgtcaactg tatcaaaaac cccacttttc
    41941 gcgcctttga ccgttgtttt tactggtgca tctttttgtt ctgctaattt ttctaaaaga
    42001 acttttttta ccagttgttc gagttctaat gattccatac agaattaccc cttctctatc
    42061 attgataatg cttttttcgc aatgtggata tcctcttcca ctgatccgcc gctaatcccc
    42121 attccaccaa taatagctcc atcttttccg tagattggaa caccaccgcc aaaggttaca
    42181 atatcaccat ttgtcagtgt ttctaattga taaagtgggg ctcctggctg aactgcttct
    42241 gttaattttt ctgtactagt tttcattgct acagcggaat atgctttttt cgttgccagt
    42301 tctgcactta ctaaaagagc gtgctccatt cgataattaa atctggcatt gccgtgcgca
    42361 tcgacaatag caagtgttac tggaacgcca atttcttccg atacaataca aacttggtgc
    42421 attaattttt cacaaaagga aaaagataaa tcgcttgtaa ctgacttttc ttggccagtt
    42481 tgctctaagt atttggcaac aatgagcttg gtcgctttat cgagcatttg tctaaaatcc
    42541 tcttctctag caaggatgta caagaaatcc gataagcgat ttacgaattt taataactct
    42601 tttcggatag ctgtttgttc tgacaaacga actaataatc gctcaccacg cctagcaaca
    42661 gtccttgcgc tatgaagaaa tgctcctgct gtgcttgatc caggaagaac aaaactatcg
    42721 acttttggca actttgcagt ataatcatca atgacttttt caagttgatt gatgtcgttt
    42781 tctgtaataa taattttgct agcgagggat gcttcgtgct ctgttgcaag ttctgcgcaa
    42841 acgtaaaaca actgccgctc cacgtttcta agcaaagtct tattctcagc tgaagtcacg
    42901 aatttttctg ctacactaat ttctgcattt agctcatcaa acgagccata cgtttcgaca
    42961 cggtcatcat attttttcac acgattccca tcaaataatg cagtcgttcc cttatcgccg
    43021 gttttggtat aaatactcac gagttattca ctccttactt atcaaaacta tcgacaattg
    43081 caataattgc cgaatcaatc gcactatttg gttccgcaaa aacacttcta gctgcattgc
    43141 cacgagcaac aagcacatac tccccaattc ctgccccaac agagtcacac gctacttctt
    43201 ctgagcgcac atgctctcca tttgcatcaa ccggttgtac aatcatcaat tttttaccag
    43261 taagtgagtc ttcttttttt gtggaaacta cacttcctgt tatttttgcc ataaacataa
    43321 cgtcactgcc tttcccgcac tgcaatatta tttttcgtta aatattcatt tgcaagcggt
    43381 gtaataagct gctttttata tttgcaaagt gtacttccgc ttgggattac cgcgctatca
    43441 ccgtaacaaa tcacttgacc atttgaatga aagagtctct cacctttatt tgtaaaaact
    43501 gggaactcta gctgactaag cattgtataa tcaagccaag gttcaccatt atcatatagt
    43561 tcaagctcaa tggttactcc ataatctgta gctttttcga accaagcagt taatgattct
    43621 gctcggtttc cactgagaat tcgctcaaga aaatgtttgt ttacttgtgt taatcgaatc
    43681 gttccacttt ctataaaaat cgcaactgga tcgcgtggaa gtttgctgat agcgatagaa
    43741 gttttatttg tcgcacgaag cttcaagcgc tggacaatga ttttcactaa tttttctatc
    43801 atagattctc gctccctgaa ctcatagcaa taccaagtgg cgtgacatac tgtggataat
    43861 tcggttgaaa aacaggcgtc ttcaaatagc tttcaaacgt atctttgaac tggctatatg
    43921 cggaagcacc gccaacaatg taaagtggct ctgagggaga tttctcgaga tgaacacggg
    43981 taatttctgc cattttttcc actactggac gcatcacaga aaaatgctca ctagaatctt
    44041 tttgctcgcg tttattctgc tcggcttttt ctactggaac accgtaatat cccgcaagaa
    44101 caagcgtcat atgcgttccc ccagttggtt catctgcggt ataaattact tcaccatttt
    44161 caaaaacgct gattccagtt gtcccgccac caacatctac aactgcgcca tcttgtaatc
    44221 ctagaactgc tgccgctgcg gtcggttcat caatggtgta cagtgcttcc attccggcgc
    44281 tctcaataac attggcgacc acctttttat tgtttcctac tgtacctggc gggatggctc
    44341 cagaagcatg tgttaaagtt atacctaaac atttttctgc gcgttctttc agtcgtgtca
    44401 caacctctac agactcgcgg taattgacaa cgagaccatc gcgaacagca tctgcgaatt
    44461 caaacgctcc aaaaagtggc acatcatgtt catctagaac aacaaacacg atggaggaag
    44521 tacctaaatc gacgccaact ttcactttct gatcagcaga aactttttgt ttaatatctt
    44581 tattcattag cgctgcaagc tgttccattc gttcatttgc tgtttgtaga atatccattt
    44641 cagcacctcc ttatctcgtc acgacttgat tatttttgca aagcacgtac cagcaatatc
    44701 tgctgcattt gcttcatccg tatcaatatg catttctggt ataaattgat tgtttactcg
    44761 aatcgtacaa tgatttaaaa caagacttcg catttctgaa cctactagaa cggatacttc
    44821 atcgccttgt ttcacaccat attcatgcgc cacactttct ggtaaatgga tgtggcgttt
    44881 cgcgacaatc gctccttttg gtaagcagat ttcgctatgt ttcgaaacga gtttgatccc
    44941 aggtgtcccg tcaatatctc cggaaacgcg gattggaatc ttcataccaa gcattcttgc
    45001 atccgtttta gaaagctcta cttgcgaaaa cttccgaagt ggtcctaaaa tgcggacacg
    45061 atgcagttcc cctttttctg aaacaacagt aagtgtttgt tcagcggcga attcacctgg
    45121 ttgtttgagc cattttttca cttgaatagg ttcgtttgga aaaagttggt tatagtcatt
    45181 ttctgttaga tggatgtggc ggttagagac tccaatagga atctctgttt ccacaccact
    45241 aagtttatct gttactattt gcttgattat tgcttttaat tcttctcttt ccacggctta
    45301 tagacctttt ggtagcaacg tttctacatc attgtgtgga cgtgggataa cgtggataga
    45361 ttgtacttcg ccaacgttac gagctgctgc tgcgcctgca tcggttgctg cttttactgc
    45421 accaacatca ccgcgaacca taacagttac aagacctgaa ccgatttttt cataccctac
    45481 tagtgataca tttgctgctt ttaccattgc gtcagctgct tcaattgcgc caacaagacc
    45541 tttagtttca atcattccaa gtgcattatt cattattatt tcctcctcaa attgggttta
    45601 cttctcttct tcaaaatgga tacaatcttg tcttggatcc ccttttactc gtgggcaaag
    45661 cgggtcatga catagattgc aagtcgcttc tgccgggact tcggtttctt ccactttttc
    45721 tgtttcaacc attacttccg gctgttctgg ctctatttct tcttttggcc aaaatactgt
    45781 aaaaatctct tcccctggtc gaggaatgac ttttttcgca ataaaactgt ctgaggctat
    45841 tgcggtttgt tcgcctgctt caagcgccgc attcacagca gcaacatcac cttccacttt
    45901 cacggtaatc cagccaaaac cttttgcttt ttccgtgtct acaagttgga tattggctac
    45961 ttttgccatt gtatctgcta cggttatcgc tgaagcaagt cctttaattt caatcattcc
    46021 aattgcttga tgcattcctt cacctcctta tttaaaaggt acacccttga caagtcgcgc
    46081 cgcattcatt cccatatttc gctggttttc tagtgtggtt gcgcaaaaac gatacgctga
    46141 aaatagtggt ttatctgggg gtaaattacg ataatgaatt actaaatgat catttttcag
    46201 cgtaacccct actagaagcg gagaactcgc agatgctcga aatgctgctt gcacttcgtc
    46261 tttcaaagac ataatttcta attcacatgg aatgccttct tcttctattc caaataaaac
    46321 ttgtttaata ctgtctggat tcgcgtctac atctgcatga aaataaattg ctggcttact
    46381 aacaactgga atcatgcctt agcacctcca gctagaatta agcctgttgc aactgcattt
    46441 ctagggcctt ctttaccacg aatattccca cggccagcaa cgagtgaata atgagaaagt
    46501 gcatcggtaa ttaattgtgg aatctcaaaa tcaagggctg atcctccaac aattacgaca
    46561 aatggaatat ctcgaatatt cccagttggg ctgacatatt ttaaagcgcg gatggtattc
    46621 gttacaaaga cacgctcctt agctgaacgg cgaattaact tgattttttc aattgataca
    46681 tccccaggta ttggcacaaa gccatcttgt tttacaatca ccactttggc aaaaactgtt
    46741 ggagaaagcg gcgtatcaaa aaattgcact gtgccatctt catgccgaat gtggaaaata
    46801 ctttcaactt tagcaagcgg atatttttta atatcttcgg ctaaataacg gtcttcaagg
    46861 ccaatttctg actggataat catcgttacc atatcgccag cgccggctaa atgagttgcg
    46921 ataatttctc cttttccgtt gataatcgag gcatctgtgg atccagcacc taaatctaaa
    46981 atggcaagtg gagtattagt tcccggtgta gtaagcgctc cgagaatggc agcctctgct
    47041 tctgcaccac caattttgac gcttacttgc agttcttgtt cgatttctga ggcgatggct
    47101 gccatttgta agtgatcact ttttaccatg gaggcaatac caaccgcttg ttccatggaa
    47161 aactcacctg caagcccacc ttgaacgtct actggaacaa atgtatccac agctagcaaa
    47221 tcttgaataa aaatatcagc tggtaattta tctgttagcc cagccatcgt ttggcgcact
    47281 ttttctagca tgccaccgat atttgttcct ggttctccgc tagcattgtc gagttttgga
    47341 agtgacataa tggcttgcat gattttctca gaaccttctg cgacattgac acgctgcgtt
    47401 ctggatcctg attgaagttc gatatgcccc gctggtattg ttcgagcttt gacatcacct
    47461 tctggcgttt taatcaccac cgccgaacga ttgccaatta aagctcgtgc cacaggaatg
    47521 atatttttcg tttcatctga attcaaatga aatactgtcg caataccata tgggttagaa
    47581 atggtttcaa tgacttttcc gggagctgca acttcgacag ctgctaacat atcgaccggc
    47641 actttatcaa taaaaccaac ttcatcgaca atcggaatct tatggtttag tcggttatgc
    47701 acgagaaccc cgtcatctgc ttgaagaatt gcagctgtga tttgatagcc attttcgacg
    47761 taagtattaa tttgctttgc tgcatcttca aaatcgactg ttttcgggat aatcacaatg
    47821 tagtcctcat cttttgattt agatgtaacg tcatccaaca gcaccgtcac acctgaaccc
    47881 ataccaagtc cccctggtgt tttaggattg tgaccaatca tcgtagactc agtaatgatt
    47941 gtttctgtaa tagtttccat tgccacatcg ccaatcactg gagtcgcttc attgatacgg
    48001 atttcggcta agttctcggt cgtcgcattt actttctcta aagcaagtcg caacgcttta
    48061 aaaatcccgt gaagattttg ttttgttcct ttgataccgg ttgtgtccgt aatagcacta
    48121 gcaacaaacg ctgcttcctt cgaagagttt gccattgcaa gtgccacttc cgttgtagaa
    48181 ttcccgatat caatccctgc aatatacttc attcatttca ccgcatttcc tacataatcg
    48241 cgagcaaaag gagaatttta attatcgcct tttaatttct tacgctcttg ataaagctgt
    48301 gctgcttcac gaacataatt agaacagata gttgcatgat aaacactctc taattcatcc
    48361 gcaattgcaa gtaattcttc tcttgaggaa cgatacggac gcattgcatt ataaatttct
    48421 aaaatgcgtt catctggaac gatcgttagc tctgctgcac gttcgaaatt attcgcgagt
    48481 gttgcacgtc cggcatctct tgctacttgt gcttgcattt taagcgtttc cgctgttaca
    48541 cgaacatctt ccggtttgat tgtgccatct agaacacttt tcaacgtaat gtcgtctaat
    48601 gattttgatg tcgatgtttt tacaagttct ggacgttttg ttccgagtgg ataatctcgt
    48661 actgtcagtg tatctccgct cactttttgg gaagttgttg tggagactgc gccactattt
    48721 acttcttgta aaatatttct aaccatattt tctagtgctt cttgattcat cattttcacc
    48781 tcactattag tttacttgta attcgactgc gtttttccct tgaacaacat gttttgtttc
    48841 tttgatatga agtaaagctg ctttggcttg gaatttcgga cgagccattt gatcattgac
    48901 cattggcact ggatttggtg attcaccttt ggcatatttc gccgcgtttt taccaattgc
    48961 tcggtatgtt tctagcgtaa ttaatggcgc ttgcgggaat agctctaagt tagaaagtgg
    49021 ttgtaaatct ttttggtgga ttaatgctgt accgcgcgac tgaatgccga tacaaatgcc
    49081 agaaccactt aatttgtcgc cttctactgc aacgaaagct acgtcagaag aacggaatac
    49141 acgaaccaca cgtgctttta acccttcttc ttcaatacct gcaatcactt ctcgtaaaat
    49201 ttgtttatgt ggaacaccga caatattttt tgtttgatat ttaccaaaag ctggcgcgac
    49261 cgcaataaca acttcatctt tttgtctacc cggctccgcg tccccaactt ctgttaaaaa
    49321 gctttcatcc gaaactgcaa cacttggctg ttctttttgg aaagaaactt tatcttcttt
    49381 tagctgtaat tcatctagta cttccgagat aattccgcgg agtacttttt cgttaatttc
    49441 aaccatgtct cttaatcctc ctttataaaa aatgggaagt agcttattct aattcgtttg
    49501 catcaactgc aacagcgata tcttttaatt tttcccagcg ttcgccctct aagcgataac
    49561 cagttccagg acctgcataa tcatttaagt cattgacgga actaatgaca ttccagtctt
    49621 tatcaatgat ggcagatgta tgaaggaagt ccccagatac acgttgtttc aacatattta
    49681 gtacactttc agcaacatca tcgaatccgc cagcagataa cgctttaaca acatccagac
    49741 cagtaacacc acggtccatc atttcagcag ctgctttaat atcttctacc atgttacgtt
    49801 ctggcatatc tttacttcca cgtgcatacg ttgctgcttc tacttccgca tcggttactt
    49861 ctggaagacc taatttatca aagacagctt gaattacacg tgccgcttta tttctaactg
    49921 caacgacttc ttcttcggta actggcgtta aaccaccgtc tacttttaaa tcacgttgca
    49981 aaatattgta atcatcaaag tcatctgcat caaaattgga accagcaaac atattgtcat
    50041 agttaggtgt tgcactgtaa ccagaggaaa tataatctgt tcctggtaaa aattgcatca
    50101 ataaacgagc tgtacgacga atatccgagt gcgagaatgt ttggtcgtta ccagaagcta
    50161 cttctagatc taacattacg gcaattaaat tctctgcaag aaccgctcta ataccacttg
    50221 gtacggctcc cggaattccg atacaactaa tcgaaccatt ttgtaaccct tgaacaccag
    50281 ccgctttcgt aatgaaaata cagcgagatt caagataaag catcgattta ccttctgcgt
    50341 aacccatttg aacttcagaa ccagttccgg atgtgaagcg cattttcaaa ccgcgagacg
    50401 cgtaagcact tgccaaaata cctttggacc aaggtgtatc gtctccgtct gtaaatacag
    50461 gttctgtacc ataaacagaa atcgtttctg cataacaagt taaaccacgc ataccgagtt
    50521 ctaattctgt tgcttcttcg agagaacatt gcgttaatac gccaccacgg ccagtttgcg
    50581 aacctactaa taagctaagc gcgttaaaag gtgcataacg aactaccgca acggttgttt
    50641 cttgctcgtc aaaaccacga attgctgctt ctgccgcatc tgcagcaatt tgaacaggat
    50701 tatcacgcaa gtttgttacg tgggcctgag ttgttggtgt tctgcgagag cgcatttttt
    50761 gcatcgacat catcatttcg acaacgttca tttgtgaaac tacttctact atttttgccg
    50821 gtgtcatagc tgttgtaagt aaaacgattt tttcccgtgg cacatttggg tcgcaaagca
    50881 tatttgcgag cttcacagaa tccatttgca taacttcttc cgcacgagat aaatcgacgc
    50941 catatttagc gatgaaatgg tcaattaagt caaagtcagc gagttttttg ctgtccattt
    51001 cgactacttt tccattttct attttaatgc ttggtttcgg atcattcggg ctttccattg
    51061 cgattaggcc ttcttcaatc cattctttta caaaaccatc ttgattgacc gggcgttttg
    51121 ctaattcttc aaagcgtttt gatttcatca gtcgttaccc tccgttctaa atgtaggatg
    51181 gacgatcatt tttcggttca tcccctaaag ctccaagtaa ttttttacca atttcacgtg
    51241 ctgaaataac agcttgacgg actgcaccag aatctccaga aatacaaaga atcacttcat
    51301 tggagaaact tgttccatct gctggcgagg agtatgcaac gacatctacg ttagcggatt
    51361 tcactgcagt atctgccata acaacgccaa tcccagccgg tgcaccaacc ataagaccga
    51421 atgcttttcc tacaggtgcg ccgaatgctg tattaagtgc atgacttgct cgcgctgtat
    51481 attgaagttc gatgtgtcca gcttcgttgc cgtaaacatc tccgaaagtt ttatctaatt
    51541 cattcagtgc aacttctact gcacgtttga catcagaaac atcatcacca ccaaagataa
    51601 ttaaagaacc gtgacccgca ccgccttttg tatcacgtgg taattcgatt tttactactt
    51661 ctgtatttgt tgcttttaca gcttcatctg ctgccataat atgtgggcct gcaccagtac
    51721 gggctcctaa aatacctata gaacggtaag acttttcaag cttcattgct tctaaaagtt
    51781 gtccgtctac attcgcaatc actaggccga ttgtatctcc tattgctctt cctacaaatt
    51841 ctgttaattg aactgctttt tcactcattt gacgtgatcc tccatcctct actagttttt
    51901 ccggggcatc attaaccgtt tccattacct gttttagaat ttcgtcaatt agtttatttt
    51961 gctcactcat ctgacttcac cctcactggt aaaatttctt ccacatcagt atgcggacga
    52021 ggaataacat gtgtactcat cacggtacct acatttcttg ctgctgccgc tcctgcttct
    52081 gtcgctgctt tcaccgcacc aacatcacca cgaaccatga cagtaaccag tccagacccg
    52141 attttttcgt accctgttaa tgttacatta gctgatttaa ccatggcgtc agcggcttca
    52201 atggcgccga ctagcccttt agtttcaact aagcctagtg cttcttgcat gggtgtacct
    52261 ccttctcaaa ataagtattt tactctctca gtataggcaa tccggaatat aaatagttgc
    52321 cgcttccaaa tagaaaaaaa gaagacgcca atcgtgtttt aacacaattt tgcgcctcca
    52381 aaaaaaataa cgacaaaaag ccatccaata atgcatggtt tgggctttct cttatgaaat
    52441 tactcttagc aatatattgt tatcttcatg gcaagaaaat gtaagcgcat tataaatatg
    52501 ctatactaag aacgacagaa acacgccaag tctcgccgaa aggggaatag ctatgttact
    52561 acagtccaaa agcaacgaaa tgctcattga aaaagtaatg gatgagttct cagccgcaac
    52621 cagtttagcc tccgttgttg tagatataca cggtaccgaa gtttctagat tatgtaactt
    52681 tactcctttt tgccaactta ttcgctccaa tcccaaatat cgctcccttt gccaaaaatg
    52741 tgatatgttt ggtggactgg aagcctccaa aaccggaaag cctttaattt atcgatgtca
    52801 cgccgggtta acagatttct cagttcccat cgtcgtcgaa aaccaactta gcggattttt
    52861 acttagtggc caggttattt gtgaagaaag tagcgaagtt ggtaatattc aagcagaaga
    52921 aaccgattgg aaaaatgata aagagctcat ctccgcattt cgctctgtcc ctgttttcag
    52981 ctccaagaaa attaattctt ctgccgaaat gctcacgatt atctcccagt attacttgaa
    53041 atccgaaatg gaaaaaagcc gggaagagca aaagcaaaaa attgtttttc atcatgcaaa
    53101 aatagcgcat catgaagaaa ataaagaaat tcggaaagca cttaagtata tcgagaaaaa
    53161 tctcaaccga ccgattacac ttgatgaagt ggcaagtcat gtgtacctta gctcttatta
    53221 ttttagtaag ttattcaaaa aagaaatgaa tgtgaatttc atcaattatg tgaaccaaaa
    53281 gaaaatgtca cttgccaaag aaatgttgaa aaatccacgt ttgtccattg ataatatcgc
    53341 acggaaccta ggcttcacac aaacaagcta tttctgtaaa gtcttccgga aagagtttga
    53401 agttacgcca aaaggctacc gcgaaacatt aaaataagtt ttatctaaaa gtcatgttct
    53461 cttcccttta ggaatatgac ttttttgttg cctgaaaaac aaaaaaactt tcatccgtca
    53521 tcgaatgaga gtttatgcac agcaaataag ctatacgacc cgcatacgct ttttaggacc
    53581 ccgaaaaaga gttgcttccg gcttatttgg cgagtatcct gacttggctt catccaacaa
    53641 tcgaaccttc ccatacgcta aaaacgtaca gtggctatct cgattcttgt ccaccttaca
    53701 gttgcggggg cagtttcggc atcgcaccga attcctcttt cagaaatgta catacattcc
    53761 accaacataa gacctattta actacctaca tcttaccaca aagtatttat aaaaaaagcg
    53821 ttttcatctg aaacaacaaa aatctactat tgattagaaa taagaaaatg ttgagatttg
    53881 ttgtcccaga gcgaataaca tccttgctta aaatcgatat cccaatattg tgctatagtt
    53941 tgtttttgta aaaaaagcgc aatgactcgt aaaacaccga gatgacccac gagcaacacc
    54001 gtatcaagtt gctgccattt ttccatttct tcttctaata tcgcaactac tcgctcataa
    54061 aatatcggaa aactttcccc atttgaaaat agtgccgttt gccagttatt acagtattca
    54121 ttccacgcct ttggaaactt agtgctaatt tcctgatatg tataaccttc aaagtcaccg
    54181 aaattcattt cattcaaagc cggaaaccga agcgtctttg cgttacttaa aatatttgcc
    54241 gactgcttca cgcgcataag atcactcgta acaactaaat cgatcgagta attctccagc
    54301 ttttcgcgga gttgctccat ttgtcgaata ccattttcat ttaacgcgac atctaactga
    54361 ccacaatatt ttttcgctac attccagtcc gtttctccgt gtcgcacaaa aataagttgc
    54421 acttaaatca acccccaaag cagcactaaa caaaataaac aaataagttg tcccatttgt
    54481 ccacccgcac caagcgtatc cccattcata ccaccaatcc gtttataaac aaatgcccgg
    54541 taaataatcg taaacagaat cacgccagca taagcaatga cgccaatata agagaaaaac
    54601 gcccctaaag caactaacac aatcacctgc gcaatcacaa ccggccacca aggaactcct
    54661 agaaaaatcg aacctagtcc ttctttcgat cccgcatagg tcatttttgc aaaaagcaac
    54721 attgtcactc ctttagcaac aatcggtaaa acgaaaaata accaaccaat ttgttgcgta
    54781 tctggaacag ataggaataa agagccataa aaaagaaaat aaaagcaaat cgcaatcacg
    54841 ccattcgcgc ctacacgact atctttcata atttccagca tacgctctct tttccgagaa
    54901 gaaaaaagtc catccgccgt atccgccagt gcatcaacat gaaaaccgcc agtaatgata
    54961 atttctgcaa aaagccccgc aataatcgca actggtaagg gcatcaaaag agccaccaaa
    55021 gtaaaaatga gccaattcca agcgccaata atcaccccga caaacggcag caaagcactc
    55081 ccttttttca agttgatttc atccatattt atttggacag gtaacggaat tcgcgtaaag
    55141 aattgaatta ataaaatcaa tgttttcata ttacttccac cttttcggaa tgccactcac
    55201 gacaaaatag acttcttcta cttccgttgc aatttgctga ttaatacgac caataatgtc
    55261 tcgaaagacg cgtgttaact tgttttcagg tacaacccct aatccgattt cgttcgtaac
    55321 aaaaataaat ttggctgagg attgctctcc tgcttttaaa attgcgcgaa cttccgattg
    55381 aattcccgct tctacttcat cagcaatctc atttgtcaac tcgcgctcac caagcaacga
    55441 aaaaaacaaa ttagttacta acatcgttac gcaatcaagc attattacat catatttatt
    55501 tccatttcgc tccaaataag cagcaatccc tttaaatgct tcaaaagtat cccagtgttc
    55561 tggacgtgtt gcttgatgtt tttttatcct agcttgaaac tctgtatcat tttgaaatgc
    55621 aattccggtc gccacatata aaacacgatt atatttggta gcttcttttt cagcaaaact
    55681 acttttacca cttctagcgc caccagttac aagcatcatc tcactcatgg taattcctca
    55741 actctcctaa acatttagcc gctggaaagt tctgctcaaa tgcttttact tcacttgctt
    55801 taactgctac taaaataaca gaagcaggcc ccgcagtttt attcatggtc gcttcattaa
    55861 aaacgtcact ggctttgaaa gtacaatcat taagccgtgc taaagtattt gcctcataag
    55921 ccattccttt cgacccaacc ggcacaactt caagcacatc gctatgctcc accaattttt
    55981 tcactaaatg ataatctggc atctccgcca tcctctgcaa aacttctgct ccaacaatcg
    56041 gttcgccaaa tgcaaataag accgcagctt cgtgcacatt tataagctta agtgcagctt
    56101 tagtcgcaaa accagttaca agaacgccta cactagtttg tgttacgttc atattttctt
    56161 cagtacttcc atttaattca atatgaccta aatcagcctt aataagttcg tcttttagcc
    56221 ctgcgataac acgtttaccg gtcggctcca tttccgctcc gataacatca ctcacagcca
    56281 ctactacagc acctgaagca agcatttcta gtagagcgac tctcaaggtc aaacgagctg
    56341 tgacttccgg cgcgactctt aaaccatcat gcactttctc accaaaccca gcgctaatat
    56401 cacagctcgt caaaacacag ccaccaggca catcaattac agataaatcc ctcacttgag
    56461 gcataaaata acccccactt agttaaaatt aatcttccaa atatgcccga agctcttcta
    56521 ttccagtttc ctctaacgaa gaaatataaa aaatatgctt cgcgccagcc atgcgtaatt
    56581 cccgctctgc tcgctcgatg tctttttctg attccgctaa atccactttt gtaacaatcc
    56641 caataaccgg tttagcaaaa atactggcaa acatcggtga aaacgtctgc ttcttctccg
    56701 ttacactctg taaaattgcg attacagatg catcagccgc agtcacagtg agcgcgctgt
    56761 agagttgtct atgctgtaca aattcacctg gcgtatcaat catttcttga aaatactcca
    56821 cagcttgtgt ttttttatat aaaatatcat atccatgtaa tttctggcac agcgttgttt
    56881 taccacaacc aactgaaccc attaccatca ttttcttcaa gtgactcagc tcctagtgat
    56941 ttttggaata gaaaagtcca aaatctcatg taatgaataa acgacttgtt gtaaagctga
    57001 ttcaacagaa gaaacatcac ctgtaagtac aacggaccca ctaaaacgat caataaagcc
    57061 aattcgtacg tcacctgatt tagttgcaat gtcactcgca ataatggaag cctcacttgg
    57121 cgtaatcgtt aaaattccaa tcgcacttgc gccttcttct aatcctaatt ttgtataaat
    57181 atcacggttt gggttggcga ttaaatgcgc cagcgtcacc tgttttcccg gtacatattc
    57241 ttgtattaca cgctctttat tatcatcaaa actcattttc ttcactcctc ttctagacaa
    57301 actatctcaa aataatccta tcatatttaa gcgccactat tttgtcagat tgttcaaaag
    57361 gcacgcaacc acagtcagtg cgtacctttc tcaaaaactc tatgacaata tattgttatc
    57421 tttttaatag attaaactct caaaaacttc tttacgaggt cttggtataa ctactttatt
    57481 aattaaaagt gcttcttctt tggctgccgc aagtccagct tccacagccg cttcacatgc
    57541 tgctgtatca ccagttagaa caacgaaaga tttaccagca atccccgttg ccaaccgaat
    57601 atccattaac tgaacatctg cagcttttac tgcggcatct gcagcaataa ttgatcctga
    57661 acaggaataa tactccataa caccaactgc attcatctca tctggcactt ccgttttgtt
    57721 aattgcttta attacttggt cggacacgcg aggaatgact aaattcccga cgatatttgc
    57781 cgcaccaatc ttcgttccag cttcaattga ttgagctaca gaatctactg tccctgcaat
    57841 taatatataa tacttcccag ggcagcttgc tttagcataa atcaattcgg agttggccgc
    57901 ttttagcatt gtgtcaaccg cctcgatgcc tttcgaaata ctatttaatt cgagaaatcc
    57961 taatgtatcc attttcatga catcaccttc ttaatatgaa cttgttcttc ggttatacga
    58021 ataatttgac cgtcaatact tgcatggata tttgccccaa gagacgcatc aggaattttc
    58081 gcaattaaat cacctttttt cacgatgtcc ccttcactta ctactggaat agacggcgcg
    58141 ccaatatgca ttttcgttgg gataaatact tcatctacat ctagataatg cattgtttct
    58201 aaatgaacgt ctgcatattg ttgtaagccc attttgatta gaatattttt gggagcaatt
    58261 gatttatatt cacgcatcgg atcaggcgta aattcttttt tatcagtttg ataacgaacg
    58321 ccttgtttta aaagttcttt tttcacatga atatttactt ggcgcggtga gagccccatc
    58381 ggacaagcaa ttacctcaca aatgccacat tcacagcaaa tcatcgcttc ttcccaaatc
    58441 ggatctggtt taatatccgt tatatcttct gcaaccgcga aatggcgcat aactttatgc
    58501 ggatgaatat cgtgacctaa ttgttttctt ggacataaat ccgaacaaag tgaacactga
    58561 atacaagccg attttgtttc attaaaaatt tgttccactg tttggtaatg tagcttgtgc
    58621 agataaccag tatcctctgc cacaatcaaa cccgaagttg ttttcgttac tactttttca
    58681 gcaatggtag acttgtcatt taatttcccc atcattggtc caccatctaa aaataaatac
    58741 tcgtctaaat tagttccacc agctgctgct aaacagactt caaatggcgt tccaactggg
    58801 acatctaaaa gtttcggctc tccaactgct ccagttactg tcagctgttt acgaacaact
    58861 ggtgcgtcat cttgaattgc atgaaagacg ttccacattg tcgagacatt cgatacaata
    58921 cagccaacca ttagtggaat accgcttggt ggcacaacgc gtccagtcac ttcaaagacc
    58981 atgacttgct cgtcaccagt tggatagaca ttatccatct catgtattgt cacacttgca
    59041 tctagttctg taattgctga ccgtaaagcc gcaatttcct ctgtgtaata ccgttttgtt
    59101 gcaataacgg caaattctgc acctacttgg cttttaacca tttcaattgc tttaatcgtt
    59161 tctactgcat ggtttctcat gacaaaatga tctgttttta ggagcggttc acattccgct
    59221 gcgttaataa ttaagtattc cacttcaccg ctaaatttgg catgggtcgg aaagcccgct
    59281 ccaccacaac caacaactcc ggcatcttta atcttttcta aaatggacat ttggctcaac
    59341 accctcttaa tagtttttca gtatacttca atgatagagc gtttacattc caaaatctat
    59401 agtaaaattt tgcaacctaa aagagagcaa tataatagaa taaaaaacct actaaaatta
    59461 gcaggtttta tcatttttat tacgctttcc gatttcttct gtttctaaat tttctactaa
    59521 ctggcgtact tcccgtttta ctttcttggc gtatccagga ttcccgcctc ctgttgaaat
    59581 accgactagc aactcatttt ttgatacagt tgccatattg aaaaaatcgg aattcttttg
    59641 ttcagtcgta tcattcacta gttgttctgg caagcgatct ttcagtacca tttgatttac
    59701 ttctgggtta ttcgtacaaa taaatatcag aaaagcacca attagatgtt ctgcccggta
    59761 agcttcttct ttcacctgca cttgaagctc tttaatctct ggcaaaacgt ctaacccgac
    59821 aattaaaata tcagctccgg tgtgaagcaa cccctttact ttacgaagcg ccaccttccc
    59881 accgccaatt atgacaaccc gtttccctgt aatatcaagc attatcggat atttcatcat
    59941 caagcccccg cacatttttc ttcattttaa cacataattg aaacattttt cgggtatagt
    60001 taaaataatt caaaaggagg taaaataaat gtttaatcaa gcaaaacgaa tctccacatt
    60061 tttcacgttt aacggcaatg gcgaggaagc atttaatttt tatttagaca ctttccccga
    60121 tgcgaaaaaa atcggactaa cttactttac aaaaccagag caaggcggcg atattggcaa
    60181 ggttctcaat gctacttttg aaataaaagg tgcatcattc atgattatgg acatgactaa
    60241 caacgcctcc cctgacttta gctgggccac tacaaccctt tattttgcag atacggaaga
    60301 tgaatttgac actctttttg aaaaactggc taaagaaggt acagttatga tggggccaga
    60361 agcagtagaa gcgcttcgaa aagtggcatg ggttacggat aaatatggca ttacttggca
    60421 actcgcattc gtataaaatt aagaagagaa aacgccgtcc taaagcgttt tcttttttat
    60481 attcaaaatg tttgaccatt ttcgaccatt atgataagat acctgtatta caaataaact
    60541 aaggcttttt aaggaggaat tttttcatgg cagagaatac aaagaatgaa aacatcacaa
    60601 acatccttac ccaaaaattg attgatacac gcacagtgtt aatttacggg gaaatcaatc
    60661 aggagttagc cgaggacgtt tctaagcaac ttttactact tgaatctatt agcaatgatc
    60721 caattacgat ttttattaat agccaaggcg gacacgtcga agctggtgac acgattcatg
    60781 atatgattaa atttattaaa ccgacagtaa aagtcgttgg aactggttgg gttgcaagtg
    60841 ccggcattac catttactta gctgccgaaa aagaaaatcg ctttagcctt ccaaatacgc
    60901 gctatatgat tcaccaacct gctggcggtg tccaaggtca aagcacagaa atcgaaatcg
    60961 aagcaaaaga aattatccgg atgcgcgaaa gaattaatcg cctaatcgct gaagcaaccg
    61021 gtcaatcata cgaaaaaatc tccaaagata cagaccgcaa cttctggctt tctgtaaatg
    61081 aagcaaaaga ttacggcatc gtaaatgaaa tcatcgaaaa tcgcgatggc ttaaaataaa
    61141 aaccaaaagg ttcacttaca aaatgaagtg aacctttttt attcccttta tggaggactt
    61201 aaaatgaaat taacgaaaga aaattttcaa aaacttgatc aaattcattt atcactcgaa
    61261 aaccgtcact ccatgtccga aattatcgct attttaagcg aatcttatat tgaaatcaca
    61321 caaaacggtg ttgttaaaga cttttcctat tataaatcgc taacaacact tggcaatagc
    61381 agtttagaaa tcatggatta tgacataaaa attttagacg aaacgaaggt cttatcctat
    61441 tataaattga aaaacacaag tgaaaatagc tatacaatgc gaagcaacgt ctggattatc
    61501 gaaaatggct cgtggaaact cacctttcac caaggtacaa aaatcgtata gaaaaggaat
    61561 ttgactaaaa gccaaattcc tttttttatt ttcgttttcg taataaaatc acgctagaaa
    61621 cagctagcat taaaccacta actaaactag aatgcattcc actatcccct gttttcggta
    61681 aatttctatt atctttagct actatcgtat taacagaagt agtctgtttc attaaagttt
    61741 cagtaacttg aagaactgat ttcactggat caattggatt tacttgattt gacgggttta
    61801 ctggagtgac tgggtctact gggtctactg ggtctaccgg atctaccgga tctaccggat
    61861 ctaccggatc taccggatct accggatcta ccggatctac cggatctacc ggatctaccg
    61921 gatctaccgg atctaccggg gtaatcggat taacaggctt ctccaacagt ggctgcgtaa
    61981 ttttaccaga atacgttgtt gttaacgaac caattgctac gggtaaatta tactcgtaat
    62041 ttagaatata attactttgc aacccttccc atgtaatctc gccatttgca taaatacccg
    62101 catgacttac ttttgtcggt tgtactctgc tgccattttc atcaattact ggagcgggta
    62161 aaatcaatgg atcatctacc tcaaccgcat ctaatacacg cgtttgattc gctagttcta
    62221 acctagttaa attggtcaaa tttttcaggg acgaaatatc aattatttgg ttgaaactaa
    62281 gagtcaatgt ctcgagtgta gttgatgttg ctaaactact aatatcgctc acctgattcg
    62341 cttttatatc gaagtcttca aggctagtaa gatttttaat tacactcaca tccttgattt
    62401 gattcccaaa taaacttaaa ccaagcagtt tggacatatt tttgagtgga gtaatatcac
    62461 taatattatt tctccccgcc caaaacatca gcatattaga cagattttcg actggcgata
    62521 aatcacttac ctcacagtct cttatagtca aaaattccag ttgtgtcatg tttttaacgg
    62581 cactaatatc cgaaatagga ttggcgctaa cattcagttc taacatgttc gttaaatttt
    62641 ttatcggttc aatcgtttgt aagttattaa actcaaaatc aagtgacatt aatgctgtca
    62701 aattcgcaat tggggttaaa tcacttattt gatttcttgg catctgaatg atttctagtt
    62761 gcgttaaatt acttaatggc cctagatcac tcacttggtt accatagcca aatacttgtg
    62821 tgagattttt taaatattct actccttcaa gactttgaac accttttgaa tcaaagtgca
    62881 aagatttaac tgtattcaat tggttttgcg taactgggct agttgcagag ggaagcttta
    62941 accaatttgc tacaacttgc gcgagctttg gatcaggaaa aatttcatta atcggctttg
    63001 aatctgtaag cgaatagact gtttctgctt cgactgtatg tggcttagta aaatccccaa
    63061 tactaaatac acaagcaaag ctcaaaagta aactggttgt aatcttgata gtttttttca
    63121 tagtatcctc cttgattgtc aaccaacata atactctgtt tatataatca aatcaacaga
    63181 ataaggaggc aatttttctt gtttcaggaa attattttcc ctccttttat tcggaagcta
    63241 attcccattc acccttggta atattgcttt caccgtactt atcataccca tttatttttc
    63301 attaaaatat gtctaaaaaa tgaaccaata taagaaatca g
//
LOCUS       DASDYO010000004        48145 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.004, whole genome shotgun sequence.
ACCESSION   DASDYO010000004 DASDYO010000000
VERSION     DASDYO010000004.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 48145)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 48145)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..48145
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.004"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(119..1219)
                     /gene="ychF"
                     /locus_tag="U0290_000236"
     CDS             complement(119..1219)
                     /gene="ychF"
                     /locus_tag="U0290_000236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-regulated ATPase YchF"
                     /protein_id="HEM2300305.1"
                     /translation="MALTAGIVGLPNVGKSTLFNAITKAGAEAANYPFATIDPNVGIV
                     EVPDHRLNKLTELVKPKKTVPTTFEFTDIAGIVKGASKGEGLGNKFLSHIRQVDAICH
                     VTRCFDDENITHVEGRVDPLDDISTINLELILADLETVEKRIGRVEKLSKQKDKDAVA
                     EYNVLVKLREAFENDKPARAIEFNEEEEKIVRNLFLLTRKPVLYVANVSEEDVSSPDD
                     NKYVQQVREFAASENSEVIVVCARAEEEIAELEDEDKLEFLEALGIEESGLDQLIRSA
                     YTLLGLATYFTAGVQEVRAWTFIKGMKAPQCAGIIHTDFERGFIRAEVVAYDALLEYG
                     SEQAAKEAGKVRLEGKEYEMKDGDVVHFRFNV"
     gene            complement(1370..1678)
                     /locus_tag="U0290_000237"
     CDS             complement(1370..1678)
                     /locus_tag="U0290_000237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2300306.1"
                     /translation="MEGMELASFQIISSVGAARSCIIEAMKFGRQRKFTEAYKKIDEA
                     NEFLSEGHKNHVQLIQKEADGGDVQISILFMHAEDQFMTTYTLRDVAYEMIAIWKEMK
                     "
     gene            complement(1684..3954)
                     /locus_tag="U0290_000238"
     CDS             complement(1684..3954)
                     /locus_tag="U0290_000238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HEM2300307.1"
                     /translation="MAVYLDKEKPVSERVEDLLSKMTLAEKCGQLNQRMYGWEAFSRD
                     GETFHITEKFKEEVTRFEGIGALYGLFRADPWSKMNKDTGVSRKNAGKVANKIQRYVI
                     ENTRLGIPVLLAEEVPHGHQALDSESYPVNLARAASFNPELQKQVASAITEEISEKGV
                     HLALASALDILRDPRWGRAEECYGEDPYLAAELTAAITEGFQASGKIAVILKHFAAQG
                     EPIGGHNSGPVSIGVRELREIFLEPMRAGIRSGALGVMAAYNEIDGVPCHANKELLTT
                     ILREEMGFSGIVMADGCALDRLLKLNPDPKKAAKMALEAGVDLSLWDEVFPFLEESVE
                     KGILDEKVVDDAVRRVLQVKFQLGLFEQPFVEEEIQAPKSDWKQLNLQAAREGICLLK
                     NDFETLPLVGERKKIAVVGPSIDALYNQLGDYTAPQNESECVTVLEGIKKLLPKNWEV
                     VSEKGTEIREELPDGIQRAEVVAKEADAIVMVLGGSSARNFDMEFLNNGAVSSKGPNM
                     DAGENVDVADITLPQPQLDLFYAMKRTGKPVIVVMIQGRPIAIPEISSTADAILTAWY
                     PGSVGGTAIAEVLFGHYNPSGKLPVSIPRSSGQIPIYYNQKAVEYKEDYFDLTGKPLY
                     PFGYGLSYSAFEYQDLQIKQESIKIAELLGGQSVEVKVTLKNTSNVAGEEVVQLYLHD
                     MEASITRRKKELKAFKKVRIAAKQTATVTFKLDKSSFEIWSINNKYEVEPGGIEIFVG
                     GSSDTKLTGRVSIIGG"
     gene            complement(3989..4288)
                     /locus_tag="U0290_000239"
     CDS             complement(3989..4288)
                     /locus_tag="U0290_000239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2300308.1"
                     /translation="MKNIMLMCNAGMSTSVLVRKMERVVEERNLELTIWAISETDFEK
                     NWRKADAILLGPQVNYMKDKVIDTVGDNVSVAVIDIVDYGRMNGEKVLDLAISLL"
     gene            complement(4303..5598)
                     /locus_tag="U0290_000240"
     CDS             complement(4303..5598)
                     /locus_tag="U0290_000240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2300309.1"
                     /translation="MKKFIEKLSWLSQKLGNQIHLKSMRDAFATILPFIMLAGFMVLI
                     NNVIIKPDGFMSAIISSETLTTWQGLGNSIVNGTLGIITILIGASVAYFLAQNRKFEN
                     PFAPALMTIALIVIFIPAVTEIVPIGAEKSVEVAGVLPIALMGSAGMFVGIVTALLAT
                     EVFIRLSKSEKMKIHISGDSVPPAVIKSFNVLIPTMLTILIFAFISFLVVTLFSLNLY
                     SLISAIIQEPLTFLVTSVPGFLTLMTISQMLYSIGIAGSGILGPIMDPVLLANMQENM
                     TAFANHTEIPHIINTTFRDVFGVMGGGGNTIALLIAIFIWSKRKDYREIATLSAAPGL
                     FNINEPVVFGLPIVYNLSLMIPFIISTPLCLCLAYFATKLHMISEVVVMVPWTTPVVA
                     SGFLATGGDWRAAVFQIFLIGVCVLLYLPFLKANDRIKA"
     gene            complement(5748..7664)
                     /locus_tag="U0290_000241"
     CDS             complement(5748..7664)
                     /locus_tag="U0290_000241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2300310.1"
                     /translation="MSASKLSLPRWKQIVHMLYLKMEFISGGELGEALAVNPRTIRND
                     IKVINQILMIGGNRIESLPGVGYRLVIGDEKALREALLDDSIGRANMNIVPMFAEDRA
                     DYIIRYLLLKNDYVKLETLSEELFVSKSTINLDILEVKRKLKENELKVEKRAGYGIRI
                     TGAELAIRFCFSRYLLVESTSPLITETEINFFGEVNLEMMEQIVVSNIAKYNIHMTDI
                     SVKNLIIHIAIAVCRVKDNCYVPATDLEDIEFSMPELRAAQGIIKEIDLSEGIRFPES
                     ETAYLLLHLSSKNRKSDFNNYREYIIVDKMLEKIKELYGYDFKQDQKMISNIALHLKP
                     AINRIKFNMNIQNPYLKNLKANYPLAFELGLVAKEVLEQELKTNVDEAEVGYLAIHFL
                     YGLDKEIGSEKQKVLIVCASGLGTSQLLESKVRKEFENTLEIVGVYSFKEYEQSGTAC
                     DFVISTVPLRMKLHPFIQVSPFLTKADIRNITALMKQDETKNQFEVDKVFKESLFLIS
                     DKKDKEQVLVDLASLLLENNIVGEDYLPSLFEREEIVPTYLGNGLAAPHPIEANVQET
                     AIGVCIFTGGGVKWNEEDQAQVIFMLAVKNKQQQQLATVYELISNLVESPKAMGELKR
                     VTSFEEFMRVLQTI"
     gene            complement(7875..9341)
                     /locus_tag="U0290_000242"
     CDS             complement(7875..9341)
                     /locus_tag="U0290_000242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catalase"
                     /protein_id="HEM2300311.1"
                     /translation="MTDRKNLTTNQGVPVGDNQNSMTAGRKGPTLIEDYVLIEKLAHF
                     DRERVPERVVHARGAGAHGKFVTKKSMKKYTMAKFLQEEGTETEVFARFSTVIHGQHS
                     PETLRDPRGFSVKFYTEEGNYDFVGNNLPVFFIRDAIKFPDVIHSLKPDPRTNIQDGN
                     RYWDFFSLTPEATTMIMYLFSDEGTPASYREIRGSSVHAFKWINEEGKTVYVKLRWIP
                     KAGIVNLSTEQASQIQAKEFNHASRDLYEAIENGDYPEWDLYVQVLDPKDLDNFDFNP
                     LDATKDWFEDVFPYEHVGTMTLDRNPDNIFAETESVGFNPGVLVRGMLPSEDRLLQGR
                     LFSYSDTQRHRVGPNYLQLPINSPKAPVANNQRDGHMPFKQQTSSINYEPNSYDTEPK
                     ENPAFIEPEQEIRGDISGRLIAEKPNNFGHAKEVWDRYSDAERAALVKNIVDDWSQVR
                     DDIKIRNLRNFYQVDPEFASRVAAGTGVNLEAHVADLK"
     gene            complement(9490..9693)
                     /locus_tag="U0290_000243"
     CDS             complement(9490..9693)
                     /locus_tag="U0290_000243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF951 domain-containing protein"
                     /protein_id="HEM2300312.1"
                     /translation="MFMEKKHFDLNDIVEMKKPHPCGTNRFKIIRMGMDIRIKCEGCG
                     HSVMIPRREFERKVKKILVKAEQ"
     gene            complement(9700..10551)
                     /locus_tag="U0290_000244"
     CDS             complement(9700..10551)
                     /locus_tag="U0290_000244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB/RepB/Spo0J family partition protein"
                     /protein_id="HEM2300313.1"
                     /translation="MAKGLGKGINALFNNVDTNEETVQNIAIKDIKPNPYQPRKIFDT
                     KAINELRDSIKIHGVLQPIILRNTDKGYEIVVGERRFRAAKEAKLKEIPAVVRDLTEE
                     EMMELSVIENLQREDLSPLEEAESYQFLMKKLGLTQAKLAERVGKSRPYIANFVRLLT
                     LPEEVQVMLRDGSLSAGHGRVLLGLKLKKNIIPTAKKAVAQGLTVRQLEDVVNNLNEN
                     VSRETIKPARVPIFIRESESQLRDKFGTAVSIKRRDKKGKIEIEFLSDDDLDRILEIL
                     DIQFDDE"
     gene            complement(10544..11305)
                     /locus_tag="U0290_000245"
     CDS             complement(10544..11305)
                     /locus_tag="U0290_000245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParA family protein"
                     /protein_id="HEM2300314.1"
                     /translation="MSKVIALANQKGGVGKTTSSVNLSSSLAFLGKKVLLVDIDPQGN
                     ASSGVGVNKGEIEHCIYDVLVDDVAIQDVLQKTDLDNLNVIPATIQLAGAEVELVPAI
                     SREIRLKKAIDSIRDDYDYVIIDCPPSLGLLTLNALTAADSVLIPVQCEYYALEGLSQ
                     LLNTIRIVQKHLNEDLQIEGVLLTMLDARTNLGIQVIEEVKKYFQNKVFNTIIPRNVR
                     LSEAPSHGKPILLYDAKSKGAEVYLELAKEVVAHG"
     gene            complement(11530..12288)
                     /locus_tag="U0290_000246"
     CDS             complement(11530..12288)
                     /locus_tag="U0290_000246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2300315.1"
                     /translation="MIHSTLSGITKRMAKIIFVKDEQNEFQAYDFLQNLIVEEPLMAT
                     LVFQGLLQLETAETRKLSTGKQILPDVHLIIGKSQAYSLQTTRVETTVDQPIQEMKAH
                     FKDKNCRLIYFTAFSGDETYYCFVKGYFKDKNPFTDQMSAYREEVKRVFLRRIEAETS
                     IGHADYQFETLKNKALANEGIAHYLDSFSASLGKYIFSKRMEKKWSQLDLALKSDLSP
                     VIIGRLEAGDPDLTLRMYQKVCTVLGVKTTFSVD"
     gene            complement(12447..12746)
                     /locus_tag="U0290_000247"
     CDS             complement(12447..12746)
                     /locus_tag="U0290_000247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300316.1"
                     /translation="MRFLKIIGHAVGVISCLMVLPSFVIAITSAILSFNPLYITYFFT
                     SPYARAVAVAEESGWGSGFNILLINYGAYLIAFGYTFFAIVKIYSWYQIAKEAKK"
     gene            complement(12758..13612)
                     /gene="noc"
                     /locus_tag="U0290_000248"
     CDS             complement(12758..13612)
                     /gene="noc"
                     /locus_tag="U0290_000248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid occlusion protein"
                     /protein_id="HEM2300317.1"
                     /translation="MPFSRLFGKKEKNQMDDIVEEGVQRVQELPMDKIFPNQFQPRTV
                     FDQDKIDELARTIRIHGVIQPIVVREMEPDYYEIIAGERRFRAVLSLEMEKIPAIIQN
                     LDDEEVAAIALIENLQREELTPIEEAKAYRSLLDMQDVTQEALAQRVGKSQSAIANKM
                     RLLKLPETVQEAVLNKQISERHARSLLALETEEQQVAILAEIAENHWNVKQTEARIQE
                     ILGVKKPVATKKTKPKRQAISRDVRIAMNTIKQSVTMVKDNGMDLDFTEEETDDFYQI
                     TIQIPKKK"
     gene            complement(13784..14590)
                     /locus_tag="U0290_000249"
     CDS             complement(13784..14590)
                     /locus_tag="U0290_000249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2300318.1"
                     /translation="MTILNEIQQNYNRLPNKEKQIAKYILEKSDELKNINIKELAEET
                     GTSISTITRFCRHVRCDSFVDLKMRVNTAATMVPSLGYDDLFEEVYSFYHKVIDNTVK
                     LIEPAKIREVVQYIQEAKRVYICGVGSSGLTAVEMSQRLIRMGLNVISVNDPHMMIIT
                     SSITTKEDFVIGISNSGNTPELVTALKIAKKNKSKVATFTSFENSEMTEISDVTIPVY
                     NTLFVSKRYFANSQFSIMYVMDIISMMLLQNESYRDNMEKTINTVTDEFH"
     gene            complement(14574..15479)
                     /locus_tag="U0290_000250"
     CDS             complement(14574..15479)
                     /locus_tag="U0290_000250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM2300319.1"
                     /translation="MENYLCVDIGGTSIKYAKFNQEGKRVGDLKSCVTPITGGANQIM
                     PALIRIVEQEKTNVAGVCVASAGVVDSVKGKIIYAGYTIPKYTGTEIKAELEHRFHIP
                     CVVENDVNAACLGEFWLGGARGRGSVLCLTIGTGIGGAMLLNDKLINGSSFTACEVGY
                     MHLSQGRFQDVASTKALIKQVASRKNIEENALNGRQVMEWAYSGDADVLAEIEQWIEN
                     LVEGVVNLIYIFNPEVIVLGGGLMEEESFFKPRLKAAISTKLISPMFDTADITFAKLG
                     NEAGMIGALYHFLNQKEAEKDDDFK"
     gene            complement(15504..15950)
                     /locus_tag="U0290_000251"
     CDS             complement(15504..15950)
                     /locus_tag="U0290_000251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2300320.1"
                     /translation="MLLDRVTLEDIEVNLKAKDWREAIQTSARLLLERGAIKESYIDG
                     MIQSVENNGPYIVIAKHIALAHTRPEFGVIRGGLTFATLADGVAFGSDMFDPVKLVIT
                     LAATDSESHLEVLSELAEVLMDEEKVTRLIEANSSQAFYDELTKEG"
     gene            complement(15963..16619)
                     /locus_tag="U0290_000252"
     CDS             complement(15963..16619)
                     /locus_tag="U0290_000252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2300321.1"
                     /translation="MLKAIVMDFDGIVIDTEVVWYEIFKEWFKTKQNYDLSIEEFLQC
                     VGSNVDDLFRELNRTEQMDINRQDFEAETQATFIENSKSLPAKEGVESFIRELKERGL
                     KLALATSSQRPKPLYHLERLGLLGYFDAIITAEDVTRIKPEPDLFLEALRALDVKPSE
                     ALIVEDSRNGLLAGNSAGVNVLVIPNEVTKHSDLTPNYLERESLAEVDLTEIMAEYNK
                     "
     gene            complement(16682..18088)
                     /locus_tag="U0290_000253"
     CDS             complement(16682..18088)
                     /locus_tag="U0290_000253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannitol transporter subunit IICB"
                     /protein_id="HEM2300322.1"
                     /translation="MSIRVHVQKFGSKLSGMVIPNLGAFMAWGILTAIGVATGSEMLK
                     GFIAPMLNYLLPLLIAFAGGRAVHGYRGGVIGTVATMGAIISSDITMFIGAMIMGPLA
                     AWILKKFDERIDGKIPAGFELLVNNFSIGIIGAGLALFSYVAIAPMVEAVTKVLASGV
                     DVLINNHLLPLTALIIEPAKVLFLNNAIGQGILSPLATLQLAETGKSVLYLLESNPGP
                     GLGILLGYMFFGKGNSKASSYGASVIHLFGGIHEIYFPFVLMNPILILPLILGGMTGT
                     FILTMTNAGLVGVASPGSIITIMMMAAPGDHIKILIAVLCAALVTFITAIPFIKRMGN
                     KDSELQDAAKKMESLKGKKSSISSVFEATVDDFNFKNVKRIAYACDAGLGSSAMGATV
                     LQKKIKNAGLEDIKVFHIAIHELPTECDVVVTHKSLIDRAKEKQPDAYYVEITDYLGA
                     PEYQELIDKIVADREQKN"
     gene            complement(18122..19123)
                     /locus_tag="U0290_000254"
     CDS             complement(18122..19123)
                     /locus_tag="U0290_000254"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2300323.1"
                     /translation="MTKQIKVGVIGVGQMGQYHAEIYQKLPQVELVAICEYNDERRAE
                     MAEKFQCKAYKDYHELLANTEIEAVSIVLPDNMHRDCVEEAVKYKKHILLEKPLAKEL
                     EDGKAMYELTKDYDKVFTVGFLLRFDPRFNMIKQRLDNGELGDIIHLYCRRNSPITGP
                     KRYIGASDLSMHVMIHDIDYINWYMDSEPVKVIAKSRSVLLKEYGMNDVIYAIVTYEN
                     GAIACLEACWVLPENSPTIIDDKLELVGTKGVAYVDSCDHGVRFVSEKGVSYPDSRHW
                     YYTNGEVSGDLAEEVMAFINNVANNTKSIITPKEAYDSLRVVDAIERSIAEGKEVSL"
     gene            complement(19143..19838)
                     /locus_tag="U0290_000255"
     CDS             complement(19143..19838)
                     /locus_tag="U0290_000255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmannosamine-6-phosphate 2-epimerase"
                     /protein_id="HEM2300324.1"
                     /translation="MGNSVMEKIKGGLVVSCQALEDEPLHSAFIMSKMALAAVQGGAV
                     GIRANTAKDIRAIQSEIDVPIIGIYKKDYDDSDVFITPTLEEVREICETGVEIVAMDA
                     TTRKRPHNEDLKDILSAIRKEFPNTLFMADTGSIEDVYYADSLGFDLIGTTLYGYTEE
                     TANKNISDDDFSHLKEVLKSTKRPVIAEGKIDSPSKARQVLTLGCYAVVVGGAVTRPQ
                     EITTRFTNEIKKI"
     gene            complement(20040..20756)
                     /gene="rsmG"
                     /locus_tag="U0290_000256"
     CDS             complement(20040..20756)
                     /gene="rsmG"
                     /locus_tag="U0290_000256"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(527)-N(7))-methyltransferase
                     RsmG"
                     /protein_id="HEM2300325.1"
                     /translation="MNPEQFQTALAEKGIELSDTQLKQFHDYFEMLVEWNEKMNLTAI
                     TDEKEVYLKHFYDSISAAVYVDFTKFDTICDVGAGAGFPSLPIKICFPHLKVSIVDSL
                     KKRMTFLDALAEKLGLTDVHFYHDRAETFGQNKAHREKYDLVTARAVARMSVLSELCM
                     PLVKKGGSFLVMKAAQAEQELQTAEKAIKLFGGKVEEHFSFFLPVEESERNIYVITKT
                     KETPNKYPRKPGTPNKLPIE"
     gene            complement(20909..21175)
                     /locus_tag="U0290_000257"
     CDS             complement(20909..21175)
                     /locus_tag="U0290_000257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300326.1"
                     /translation="MIDKLKAELLESRRNLEKNLIGMFVASQTHATSENRKRMFKMIK
                     RDKIADIKSNCQGYIDGLSTTAEGKWVNQAKKSFKENANKFDNC"
     gene            complement(21177..21542)
                     /locus_tag="U0290_000258"
     CDS             complement(21177..21542)
                     /locus_tag="U0290_000258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300327.1"
                     /translation="MDKQRQLLLKLENLDNDFNRKRRQLDEAMDDASQEKWRFHQELE
                     NLSEQIRYIHQKRDYEASEDLQKAYHLISSIQEEGDWKVKNTLTKLENEHEEHQALYK
                     KQVNSYEEELHQLKKDRDL"
     gene            complement(21535..22818)
                     /locus_tag="U0290_000259"
     CDS             complement(21535..22818)
                     /locus_tag="U0290_000259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2974 domain-containing protein"
                     /protein_id="HEM2300328.1"
                     /translation="MSLPNNDYERMRLARKEYDNLYLTEDVTISKVNGGTNTIGIVSQ
                     KINNKSTGEQSYIITDKYTPPIASISERNKVKELTILYKGSTAPANGNFNVPKHPDYK
                     DVRKDWLSNDIPTAIQITNGGGSTVTPQLKTSAETLKQTMKLYPNAQIYVYGHSLGSM
                     NAQYAIADLDKKDIKRISGGFFYQGPNIYSNLTPKQQDTVKAINALDRLFNFIDRKDY
                     VPIGYGIGDPTIGHLIEVESKKAGMVEQHMWGGYQFDKEGNILTNKEGSLQLAKYVTA
                     QQLAAINIMRTSFTKSGGGLSSSEEIFLDAAEALAITQGMKQTIQGEIRALKDVFDKE
                     IENAEELWRDTLSDARDIGSNLYESEILAALAWGGATEPEIVIDTVQDCEKSLVEATK
                     IEQEYDKLLERINEAIKSQLKTDQELAKQIGSMYG"
     gene            complement(22815..23207)
                     /locus_tag="U0290_000260"
     CDS             complement(22815..23207)
                     /locus_tag="U0290_000260"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1310 domain-containing protein"
                     /protein_id="HEM2300329.1"
                     /translation="MKKRWIIILAITVITIFGLGVKFYMDEEKLNKEMIKVVYSDEAK
                     NAFYKGLKDLDTKALTKEGVIQSYEIDEKSINHNPMGGINVTVIINENPELYIKYTLD
                     KFNGKLECGSASIAGKLSKLLGRWKENS"
     gene            complement(23320..23711)
                     /locus_tag="U0290_000261"
                     /pseudo
     CDS             complement(23320..23711)
                     /locus_tag="U0290_000261"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466328.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1310 domain-containing protein"
     gene            complement(23736..24116)
                     /locus_tag="U0290_000262"
     CDS             complement(23736..24116)
                     /locus_tag="U0290_000262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1310 domain-containing protein"
                     /protein_id="HEM2300330.1"
                     /translation="MKKRWFIAMVVVVMIVAGLGVKFYMDEEKLNKEMINVVYSDEAK
                     RVFENGLKNLDAKALTGKGVINTYEIDKKSIKQNPMGGINVTLHVNGDSELYVFFTLN
                     KADDKKLIDDGGGNSAKLGKLLDN"
     gene            complement(24275..26164)
                     /gene="mnmG"
                     /locus_tag="U0290_000263"
     CDS             complement(24275..26164)
                     /gene="mnmG"
                     /locus_tag="U0290_000263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis enzyme MnmG"
                     /protein_id="HEM2300331.1"
                     /translation="MQTYDAGTFDVIVVGAGHAGVEAGLASGRMGAKTLMLTINLDMV
                     AFMPCNPSVGGPAKGVVVREIDALGGEMGRNTDKTYIQMRMLNTGKGPAVRALRAQAD
                     KWDYQHEMKHTIEKEENITLRQGLVDRLVIEDGVCKGVITNSGAIYYAKTVVITTGTF
                     SRGEIIVGELRYSSGPNNQQPSVKLSEHLEELGFELRRFKTGTPPRVKSSTIDYSKTE
                     EQPGDDHPRAFSFDTVEMLLDQLPCWLTYTNETTHEIIQANLHRSPMFTATKKGTGAR
                     YCPSIEDKIVRFSDKPRHQIFLEPEGKNTEEVYVQGLSTSLPEEVQREMLRTIPGLEN
                     VEMMRVGYAIEYDAVMPDQLWPSLETKLVEGLFTAGQINGTSGYEEAAGQGLMAGINA
                     ARKVFEKEPVILGRDQAYIGVLIDDLVTKGTEEPYRLLTSRAEYRLLLRHDNADLRLT
                     EIGHEIGLISDERYERFLAKQSAIEAEKERLQKTRIKPTAEVQAMLKEIGSGELKDGI
                     LAADLLRRPEITYDKIAQIVSRETFVTDEIAEQVEIQIKYEGYIQKSNLQVEKMKRME
                     DKKIPENIDYDAISGLATEALEKLKKIEPLSIAQASRISGVNPADISILLVYIEQGKI
                     AKISK"
     gene            complement(26189..27562)
                     /gene="mnmE"
                     /locus_tag="U0290_000264"
     CDS             complement(26189..27562)
                     /gene="mnmE"
                     /locus_tag="U0290_000264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA uridine-5-carboxymethylaminomethyl(34)
                     synthesis GTPase MnmE"
                     /protein_id="HEM2300332.1"
                     /translation="MEFDTIAAISTPPGEGAIAIIRLSGPEAIQIADRIFYAKNSLSE
                     AESHTIHYGHIKEDGEVIEEVMVTVMRAPRTFTREDVVEINAHGGIVSVNRVLQLLLR
                     NGANLAEPGEFTKRAFLNGRIDLSQAEAVMDLIRAKTDRAMGVAIRQMDGNLSRLIRN
                     LRQEILDALAQVEVNIDYPEYDDVEEMTQRMLLEKTELVRASVEQLLQTASQGKILRE
                     GLATAIIGRPNVGKSSLLNQLIQEEKAIVTDIAGTTRDIIEEYVNVRGVPLRLIDTAG
                     IRETEDIVEKIGVERSRKALADADFILLVLNQNEELTVEDEALFEAAAGHNYVVVLNK
                     TDLETKLDIDRVRELAGENPIVSTSLVNDEGLEALEEAIKTLFFAGDIDAGDATYVSN
                     VRHIALLHQALEALNGVTTGIQLGMPVDIVQIDMTRAWDLLGEITGDSVQDELLDQLF
                     NQFCLGK"
     gene            27920..28738
                     /locus_tag="U0290_000265"
     CDS             27920..28738
                     /locus_tag="U0290_000265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEM2300333.1"
                     /translation="MKIHKLTWVLLMGLLLLSSCSTKQPNLYLSANAAAVYSVENGEP
                     LYEENADKVMPIASLTKLMTAFLVLEAVDNNELSWDEKLDLVRLDDPSAVSLYAITQK
                     RTWSVRDLYSAMLTMSANDAAETLGDRLDGANFPKEMNNQAKKLGMSSKTTFVSASGL
                     DVDGKSAVSTTKDLFLLSSKLISTHPEVLETTSKSSVTTDKGAKLESTNDSLGSIQGL
                     DGLKTGFTDEAGYCFIGTAERGGKRVISIVLDAGTAEKRFKDTEKLMEVGFKEN"
     gene            complement(28793..29500)
                     /locus_tag="U0290_000266"
     CDS             complement(28793..29500)
                     /locus_tag="U0290_000266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMUG2 DNA glycosylase family protein"
                     /protein_id="HEM2300334.1"
                     /translation="MTENTTIAKRILQFNEALANSSFDLPEGYRTVNPYSGDQSELVQ
                     KITTTFYQKYYNDTKLRRIILGSSPARRGSAVTGVPFEDAKHLQNETGIFIDKFYINQ
                     SSSDFLYDVMTEYGGCEAFYTDFYMNFVCPLGIVRMNAKGNEVNCNYYENKKLQEALK
                     PIILESLQNQIDCGIDTSVCYCIGSGENFNFLSKINEEHHFFDTIIPLEHPRFIMQYN
                     SKNKDVYMEKYLCALKS"
     gene            complement(29524..30051)
                     /locus_tag="U0290_000267"
     CDS             complement(29524..30051)
                     /locus_tag="U0290_000267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR family transcriptional regulator"
                     /protein_id="HEM2300335.1"
                     /translation="MARLSQEIILNMAEKIIYEKGMEKTTLYDIAGNLNVTHAALYKH
                     YRNKEDLFQKLALRWLEETSREIFDWTQEAGQTPDDALHDWLWLLADTKKKRYKTDRK
                     MFLLYTDYIEQNEELVKNHVAHLAQKAEEVSGRTNQGNAIITAFTYFHNPYFASRWEQ
                     AGYAELFEDVWHIVK"
     gene            30212..30943
                     /locus_tag="U0290_000268"
     CDS             30212..30943
                     /locus_tag="U0290_000268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2300336.1"
                     /translation="MTNKRVAFILGGSGGIGKAVVQKLVEQNFAVVVHYSGNKAKAEA
                     LVENIVKSGGEAISVGGDVADEAQMTRAFDFIESQFGGIDVVVNTAGIMKLSPIATLD
                     MDEFDLIQRTNVRGTFVVSKQAALRVRDGGAIINFSTSVTRTSFPTYGAYVASKAGVE
                     SLTLILARELRGKDITVNAVAPGPTATPLFLTGKDDKTIDNLAKATPLERLGQPEDIA
                     ETVAFLAGPARWVNGQVIFTNGGLA"
     gene            complement(30990..32183)
                     /locus_tag="U0290_000269"
     CDS             complement(30990..32183)
                     /locus_tag="U0290_000269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2300337.1"
                     /translation="MNQVKGEKHSLMVLLVLFIGYTSVYVDKYTIGISLVTVSQDLGF
                     DPSQKGLILSAFFLGYTLFQIPMGYLNNRIGARPVLAVSIIIVGLFLVIFGFGYSLLF
                     LVVIRFLSGALGHAGYPPSVSNYISLHIPLNKRGFAQSAMLASSGFAAFIGPLLIAQL
                     LLSVGWRNTYYWIGIAVILIGFLILIVVPKAPKIDLNAQKEKIKVPFSELLKDKQLWI
                     LLLSALFINAANYGLTSWLASYLNEVRGISISEVSYISSLAGLCILIAGVVGGYFISR
                     FFKGKEPIIIFAFCVLGAFAVYGVYLFEQLALSVICLCLCNIFLIMAFTTLMGLPHKL
                     FQQSHIATKYAAINSGGVLGGFFAPMIIGDLVNATNSYQSAFLFLALTLLASGLIVLA
                     IKKDQ"
     gene            complement(32271..33461)
                     /locus_tag="U0290_000270"
     CDS             complement(32271..33461)
                     /locus_tag="U0290_000270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEM2300338.1"
                     /translation="MRTKLMNMLQERKDEITQIRRHLHEHPELSFHEAETAKFIQDFY
                     KGKDVEMATEVGNGHAVVVTIKGGKPGKTIALRADFDALPIEEQTELPFKSKKPGVMH
                     ACGHDGHTAYLLVLADCLIQLKENIPGTIKIVHQHAEETPPGGAKSVVESGILDDVDQ
                     IFGIHVFPFGESGQVYYHSGFAMAGRTYFKLKIQGVGGHGSSPHMANDAIVAGAYFVT
                     AIQTVVSRRLNPFDTGVITIGSFDGKGSFNVIKDAVELEGDVRYMNTENRDKMDAEIH
                     RIVAGMEAMFGVTVELTYTNDYPPLYNDPAVTEQVVASLQKGVGEYLTGISEYDMLSG
                     SEDFAYYLQKIPGVFFYIGAKPKNTSNAYFNHHPKFDIDEDALLVAAKSVADVVLDYY
                     KLNG"
     gene            complement(33477..34877)
                     /locus_tag="U0290_000271"
     CDS             complement(33477..34877)
                     /locus_tag="U0290_000271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2300339.1"
                     /translation="MTSTAYKGTNKLIVGIVFGVITFWLFAQSMVNIVPAVQSDLGIS
                     SDLLSIAISLTALFSGIFIVVAGGMADKFGRVKLTYIGLILSIIGSLLLVVTQGATLL
                     IIGRIIQGLSAACIMPATLALMKTYFEGADRQRALSYWSIGSWGGSGICSFAGGAIAT
                     YMGWRWIFIISIVFALLGMLLIKGTPESKVVQNTKAKFDSFGLVLFVIAMVCLNLIIT
                     RGSTFGWTSPITITMLVVFLISAGLFFRVELRQANGFIDFSLFKNKAYTGATLSNFLL
                     NAAAGTLVVANTYVQIGRGFTAFQSGLLSIGYLVCVLGMIRIGEKILQRVGARKPMIL
                     GSGITAVGIALMALTFIPGTLYTVLVFIGFALFGIGLGMYATPSTDTAISNAPEDKVG
                     VASGIYKMASSLGGSFGVAISATIYGVIALSGNIDLAAMVGLLTNVGFCVVSLISVAI
                     TTPSAKKALELKAAKE"
     gene            complement(34877..36079)
                     /locus_tag="U0290_000272"
     CDS             complement(34877..36079)
                     /locus_tag="U0290_000272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEM2300340.1"
                     /translation="MEVWTMKEKLFQKLDEKRDRMIEIRRYLHEHPELSFQEENTAKY
                     IADFYKEMDCDVRTHVGGNGVVVTIDTGKPGKTLAIRADFDALPITEETGLAFASKNP
                     GVMHACGHDGHTAYMLILGETLIEMKQELTGKIVILHQHAEETPPGGAIQMIQDGALD
                     GVDNVLGIHVMSTMKTGEVFYREGAIQTGRSYFKLKVQGQGGHGSSPHLANDAIVAAS
                     EFVVAVQTVISRRLNPFDVGSITIGSFDGKGSFNVIKDAVELEGDVRSMSEEARNIIQ
                     KEITRIVSGIEAMFGVTCELDYKNDYPVLNNDEALTDFVVKSIKGAKIPEITDVVRCE
                     PQPPSEDFAYYAKERPSSFFYVGAMPADGHFYPHHHPKFDINEDSLLIASKAMGACVV
                     DYLKGENN"
     gene            complement(36273..38615)
                     /locus_tag="U0290_000273"
     CDS             complement(36273..38615)
                     /locus_tag="U0290_000273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014589156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2300341.1"
                     /translation="MSHLKDYTIGIQHIKQLTSEISLGTKLVFAISGQITIKVSEQKF
                     YLQEGDVLVLDRNTFYTIEGNEDNLFINLTISDTFFAHYYEDYFQHSFKFFSKESDPG
                     RERVVGSLRKSVSELLIASATKKRANKLEAQSALFQILLLLTRFLKKGIPSSARKEVN
                     DKRISRIIREVEERFDEALSLREFAQKEFLSEAYLSRYFKKTTGLGFLQYLTEVRLKH
                     AIQDLLHSAESITEIALKNGFSSQKHFSEVFKFHFELTPSEYRAEHHVETNLLIDNKT
                     SELGASIEQIVPSPEILVKLSRLYHDVEPGKELNKAPFEKKKIDITEKTERCLSENMN
                     ILTIGELKEVLKDNVQKQIITTRDEIGINYIGIRHLFRGSTFLPETETDELVPTSSPY
                     ANADLALTFLKQQNLQLFIRLEYQDIVGDEAAVFERLDHFLKHCMQVFGREFVSKWHF
                     MFFEPKNTYADKEELKKLYLKIYHTIKSRFPAIQVGNFVPFSLSKNAVPERHTWFLEE
                     ADKMDFVAYNANQNEAVDFSKEDMKSFSISEDYCLSKTLQLKAFLKHHHINKPLMLVN
                     WNTLSGNTRYTNGTFFRGALVLKTMLDLVPEVDALGFWINTELHEGDDSKLNISLDGI
                     EMFHFFNGKRPAFYAVKFLRRLKGVVVAKGEDYIMTKHADGYQLILMNCATINPRYSV
                     EERFIKEEQKEVHIRLTGLYAGDYQVCKWQFDRDNGALYSKYWQLNSKYGLDKEILDY
                     IVDASQPTLTVSDETITEDWSFYAYLDINAIHFYEFRSTV"
     gene            38828..41578
                     /locus_tag="U0290_000274"
     CDS             38828..41578
                     /locus_tag="U0290_000274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2300342.1"
                     /translation="MKTSKIIIASLVSLTLVSNPILTFAATNDVIDNTTEITTDKETS
                     PTQPTIKNTLKAGQTQSFNDWFPDDNFASEVAAAFEMQATDTISEEQLATLTSLDCHN
                     SSIADMTGIEKLTGLTKLICTYNNITTLDLSQNTNLTYLACDSNKLTNLDVTPLTKLT
                     YLNCDTNKLTKIDVSQNPLLTYLNCARNTLTEIDVSHNTQLTELDCHLNKKITKLDVT
                     PQTQLTTLDCSFNKITALDVSQNKLLNRLNCDTNNITKLDLNQNIQLTFLDCSSNKLT
                     EIDVTPLTQLTYFDCSVNPLTELDVSTLSKLTTLHCIQTDLLEIDLTHNTQLIYFQAE
                     GCRKIKELDVTHNTQLYLLDCQAAGITELDLSQNPKLVYLYLNNTELTKLDVSHNTKL
                     KSLSCVNAHIQDFSSVGKIPVLNNNLDAEGQTITMPKETLTNNSLTIAVSPDLLDQFG
                     NPMNIEPGDGGVYDQATNTITWENLSTDNPAVTYTFTSENGAIVGTVTTPFEAPQPIK
                     GEDVTVHYLDDKGEKLAADEVLSGNLDDPYTSSAKDIPDYTLTTTPDNATGTFTTTSQ
                     SVTYVYTKNIVAAEPVTVNYVDDTGKTLAPSETLNGNVGDTYNATAKQIDGYTLTTTP
                     NNATGTFNTSSQTVTYVYTKNIVAAEPITVNYVNDTGKTLAPSETLNGNVGDTYNATA
                     KQIDGYTLSAEPTNATGQFTSSAQTVNYIYTKNPAPEKGVVEIHYVDENNKQLSSATK
                     ISGTVGDNYTTEPKNIDGYTLTTTPDNATGTFNTSSQTVTYVYTKNIVAAEPVTVNYV
                     DANGKTLAPSETLNGTIGDTYKATTKQIDGYTLSAEPTNATGQFTNSAQTVNYIYTKN
                     TNIDQPLPDKKTTKPSNLKTTEVKKASDTLPKTGDSTPWKSALLGVFLSSTALVIWKK
                     KK"
     gene            complement(41623..41946)
                     /locus_tag="U0290_000275"
     CDS             complement(41623..41946)
                     /locus_tag="U0290_000275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic metallochaperone ArsD family protein"
                     /protein_id="HEM2300343.1"
                     /translation="MKQISYFYSAENESEINLEIWKMFMNQSEDERKIHFDYTGIVFD
                     IQLGEVGKVDLPERVQMLIDKNGMEALPILVVDDAVYNYGEFSVIDAVEELLDVGVSI
                     QVEED"
     gene            complement(41954..43195)
                     /locus_tag="U0290_000276"
     CDS             complement(41954..43195)
                     /locus_tag="U0290_000276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1015 domain-containing protein"
                     /protein_id="HEM2300344.1"
                     /translation="MVNIRPFKAIRPIKNLAEKVASLPYDVLNSEEARELGDANKYSF
                     LHIDKAEIDLDPAVSPYDPAVYQKAADNLEQFELDGWLGREANPAFYIYQLTMDGRPQ
                     TGLVVCTSIDDYTNGKIKKHELTREEKELDRIRHVDVCDANTSPIFLTYRGKEAINAL
                     VESWVNENEPEYDFESFHGVAHKVWAITDAHILEDLSAAFSEVPALYIADGHHRTESA
                     VKVGLKRREEFPEAGPEAEFNFFLSVVFPEEQLEILDYNRVVNVPIEADFLSKVEASF
                     DVEKVGKEAFKPEKPKQVGMYLDGNWYKLTAKSEVIPNDVIGQLDVSILQSQVLTPIF
                     GIEDIRRDNRIDFVGGIRGLEELTRLVDNGSYSVAFAMYPPTMDDLLGVADAAEIMPP
                     KSTWFEPKLLSGLFVHDLESK"
     gene            complement(43284..44471)
                     /locus_tag="U0290_000277"
     CDS             complement(43284..44471)
                     /locus_tag="U0290_000277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate dehydrogenase"
                     /protein_id="HEM2300345.1"
                     /translation="MFNIQTFNAIAKEGLKTFDLEKYVIDANQPADGILLRSYNLHDF
                     DFPETVKAVARAGAGVNNIPVENCSEKGIVVFNTPGANANAVKELVLASLFVSARPIL
                     EGTEWVKELPAEDDVEQKVEAGKKAFAGTELAGKKLGIIGLGAIGALVANDALSLGMD
                     VVGYDPFVSVDTAWRISKEVERAMTIEEVLATCDYLTVHVPLTDKTRGMFNADTLQLV
                     KDNAVLLNFSRGELVDSASVKEALDDGLLRLYITDFATKELLNHKKVHVFPHLGASTE
                     EAETNCAKMAAKELQSYLETGSIKNSVNFPNVEMPYNGHPRIGICHKNIPNMVGQITT
                     ELGKYSLNILDMINRSKNEYAYTLIDIDKETQANLEQLKSDLLAVQGVLRVRVIEPLG
                     VTV"
     gene            complement(44464..45555)
                     /gene="serC"
                     /locus_tag="U0290_000278"
     CDS             complement(44464..45555)
                     /gene="serC"
                     /locus_tag="U0290_000278"
                     /EC_number="2.6.1.52"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-phosphoserine/phosphohydroxythreonine
                     transaminase"
                     /protein_id="HEM2300346.1"
                     /translation="MERVYNFSAGPAVLPVPVLEKVQRELLSYNGSGMSVMELSHRSE
                     LFQNILDDAESLIRELMEIPENYKVLFLQGGASLQFDMVPMNLANGKKAAYVNTGSWA
                     KKAISEAKKIQGVEVEVIASSEDRNFSYIPEIPTVSSDAAYLHVTTNNTIEGTAMFDV
                     PDSAVPVVADMSSNILSSVYDVKKFGLIYAGAQKNIGPAGLTLVIVREDLIGQVEGLP
                     SMLDFKVQAENDSMYNTPPTFAIYVAKLVFEWIKEQGGVAGIEALNRKKAALLYNYID
                     QSDFFSSPVEPSARSLTNVPFVTNSAEFDKAFVQEAEANGFKNLKGHRSVGGMRASLY
                     NAFPIEGVEALIAFMEKFANARKGGEVRV"
     gene            complement(45926..47074)
                     /locus_tag="U0290_000279"
     CDS             complement(45926..47074)
                     /locus_tag="U0290_000279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2300347.1"
                     /translation="MENKTRLWTKDYVFLLLGSVLLYIGFMVFMPTLPARIIELGGTQ
                     MEASLAVGLFSIVALLMRAIAGSWNDKFGPKVLIIVGFLILILTTVNFYWSTAVAALL
                     ILRLFHGAGWGIGTTSIATGVSKLVPPSRTGEGIGFYGLTTALGMSLAPIIAILIMNY
                     FSFDVLVTFSLVLMVFILILMTQVKIPKSEKIVHQKMKLFEKTALLPAGLCLLMAIPL
                     GGIQTFMMVYGTELGISTTWIYFIGQAIMVLVSRLFAGRLYDTKGHRFVIIPGALSMI
                     IGILILSFATGAISLFIASLFFGLGYGMSQPALQALAVDRAAPHNKGTANGTFLSGMD
                     IGMAVGSFGLSIVATYYNYAIMYRTAIIALVVFFAVYWFTLGRKVKNS"
     gene            complement(47088..47510)
                     /locus_tag="U0290_000280"
     CDS             complement(47088..47510)
                     /locus_tag="U0290_000280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2300348.1"
                     /translation="MRGYYDEISFDVNTTAKKMHLFLLRSIASYDVTPEQWSVLEGIE
                     ANEPISQKEIALWTKKDTPTVNRIVDVLLRKELVVREVSTEDRRISLLSLTDKGRKET
                     NELRDIVEASCERMFAGISRADLEQFTAILKNISTNIE"
     gene            complement(47613..47966)
                     /locus_tag="U0290_000281"
     CDS             complement(47613..47966)
                     /locus_tag="U0290_000281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300349.1"
                     /translation="MVTAIQKEQVRTEKNAAFLTSRPEVDYLERESFFITLKDAIKRE
                     WVVRLKYFQEADVSSLRLAPFEYPSAFLGLGEIETQDLVPLEIDMLTEEVILKDIVGY
                     EYVIEFRDIIDVELL"
BASE COUNT        14177 a        10714 c         7959 g        15295 t
ORIGIN      
        1 tcaaaaatta gcttaatact cttttgaagt atatcagtaa cgcagaattt atgaactaac
       61 ctaaaaaaca atcttttgac atacttactt gtcaaaagat tgtttcacgt gaaacatatt
      121 aaacgttaaa gcggaaatga acaacatctc catctttcat ttcgtattct ttaccttcca
      181 agcgtacttt tcccgcttct ttggctgctt gctctgagcc gtattcaagt aaagcgtcat
      241 atgcaacaac ttcagcgcga atgaatccac gttcgaaatc agtatgaatg attccggcac
      301 attgtggagc tttcatacct ttgatgaatg tccaagcgcg aacttcttga acgcctgctg
      361 tgaagtaagt cgctaagcca agcaatgtat acgcagaacg aatcaattgg tctaaaccag
      421 attcttcaat tccaagcgct tctaaaaact ctagcttatc ttcgtcttca agttcagcaa
      481 tttcttcctc agcgcgagca catactacaa taacttcaga gttctcactc gcagcgaatt
      541 cgcgtacttg ctgtacatat ttgttatcgt ccggactaga aacatcttct tcacttacat
      601 ttgctacata taaaactggt tttcttgtaa gtaagaaaag gttgcgaacg attttctctt
      661 cttcttcgtt aaattcaatc gcacgagctg gtttgtcatt ttcgaaagcc tcacgtagtt
      721 taactaaaac gttatattca gccacagcat ctttatcttt ttgtttagat agcttctcaa
      781 cgcgtccaat gcgcttctct actgtttcta agtccgctaa gataagttct aagttgattg
      841 tagaaatatc gtctagcggg tctactcggc cttctacgtg ggtgatattt tcgtcatcaa
      901 aacaacgagt tacatggcat attgcatcca cttgacgaat atgggataag aatttgtttc
      961 caagtccttc ccctttacta gcacctttta caattccggc gatatctgta aattcaaaag
     1021 ttgttggaac ggtctttttc ggttttacaa gttccgttag tttgtttaat ctgtggtcag
     1081 gaacttcaac aattcctacg ttcgggtcaa tcgtcgcaaa cggataattc gcagcctctg
     1141 ctcctgcttt tgtgattgca ttaaaaagtg tcgatttccc aacattagga agcccgacaa
     1201 taccagctgt aagtgccatt atatataaac tccttttcat taacttcatt ttgaaaatgc
     1261 ctgtcaaata gacatttttt cactaacgta tattataaag gtttttcaaa caaaaagcca
     1321 cccaccaaaa aacgaaaacc ctttaatcag taaaggattt tcgttttaat tacttcatct
     1381 ctttccaaat agcaatcatc tcataagcta catcgcgtaa tgtataagtt gtcataaatt
     1441 gatcttccgc gtgcatgaag aggatagaaa tttgtacgtc tccgccatct gcctcttttt
     1501 gaattagttg cacatgattt ttatgacctt cgctaagaaa ttcattagcc tcgtcaattt
     1561 ttttatatgc ttctgtgaat tttctttgtc ttccgaattt catcgcctca ataatgcaac
     1621 ttcttgcggc gccaacagaa ctaattattt gaaatgatgc gagttccatt ccttccattt
     1681 tcgctagcct cctatgattg aaactcgccc tgttaattta gtatcagaac ttccaccaac
     1741 gaaaatttct ataccaccgg gctccacctc atatttattg ttaattgacc atatttcaaa
     1801 acttgattta tctagcttaa atgtcactgt agctgtttgt ttcgctgcaa tacgaacctt
     1861 tttaaatgct tttaattctt tttttcttct agtaatactt gcttccatat catgaagata
     1921 aagttgcaca acttcttcac cggctacatt agaggtgttt tttaaagtta ctttcacttc
     1981 tacagattgc ccgccaagga gttctgctat ttttatagat tcttgtttta tctgtaaatc
     2041 ttgatattca aaagcgctat aacttaaacc atagccaaat ggatagagcg gcttaccagt
     2101 taaatcaaag tagtcttctt tatactccac tgccttttga ttgtagtaaa taggaatctg
     2161 cccggaggat cttggtatgc tgactggtaa tttacctgaa ggattgtaat gaccgaaaag
     2221 aacctcagca atcgccgttc caccaacact tcctggatac caagctgtga gaatcgcatc
     2281 tgctgtcgaa ctaatttctg ggatagcgat tggtctacct tgaatcatta cgacaattac
     2341 aggctttcca gtacgcttca ttgcgtaaaa caaatctaat tgcggttgtg gaagcgtgat
     2401 atcagcaaca tccacatttt caccggcatc catgttcggg cccttagagc ttaccgcgcc
     2461 attatttaaa aattccatgt caaaattccg cgcacttgaa ccaccgagca ccataacaat
     2521 ggcgtctgcc tctttagcaa ccacttctgc tctttgaatg ccatccggaa gctcttcacg
     2581 aatttcagta cctttttcag aaacgacttc ccaattttta ggaagcagtt tttttatccc
     2641 ttctaacaca gtgacacatt ctgattcatt ttgcggagct gtataatctc ccaactgatt
     2701 ataaagcgca tctatgctag gaccaacaac agctattttt ttccgttcgc ctactagagg
     2761 taatgtttcg aagtcgtttt tcaaaagaca aataccctct ctagcggctt gtaaatttag
     2821 ttgtttccaa tcagacttcg gtgcttgaat ttcttcctct acaaacggtt gttcaaatag
     2881 ccctaattgg aatttcactt gaagcactcg cctcacagca tcatcaacga ccttttcatc
     2941 aagaatgcct ttttccacgc tttcttcaag aaatggaaac acttcatccc acaaactcaa
     3001 atccacaccg gcttcaagag ccatttttgc ggcttttttt ggatcaggat ttagttttaa
     3061 taatctatca agggcacacc catctgccat aacaatcccg gagaatccca tttcttctcg
     3121 caaaatagtt gttaaaagct ctttgttcgc gtggcatggc accccgtcaa tctcgttgta
     3181 agctgccatg acgccaagag caccacttct aattcccgcg cgcattggtt ccaagaaaat
     3241 ttctctaagt tcccttacgc caatagaaac tggtccagaa ttatgcccgc caatcggctc
     3301 gccttgtgcc gcaaaatgtt ttaaaataac agcaatcttc ccactcgctt gaaagccttc
     3361 tgtaattgcc gctgttaatt ccgctgcaag gtatggatct tcaccgtaac actcttcagc
     3421 gcgtccccaa cgtgggtctc gaagtatgtc taatgctgaa gcaagtgcta gatgaactcc
     3481 cttttcggaa atttcttctg taatcgcact tgcgacctgt ttttgcaact ctggattaaa
     3541 agaagcagca cgagctaaat ttaccggata agattcgcta tctaacgctt ggtgaccgtg
     3601 cggaacttcc tcagctaata gtacaggaat ccctaggcgc gtattttcta tcacatagcg
     3661 ttgaatttta ttagctactt tgccagcatt tttccgactt acacccgtgt ccttattcat
     3721 tttggaccat ggatcagcgc ggaacagacc gtataaagcg cctatacctt caaatctagt
     3781 tacttcctct ttaaattttt ccgtgatatg aaacgtttcg ccatctcttg aaaaagcttc
     3841 ccagccatac attctttggt ttagttgacc acatttttct gctaaggtca tcttggaaag
     3901 taagtcttct acacgttctg aaactggttt ctccttatcc aaataaacag ccatattctt
     3961 tctcctcctt gctaaaaaac taagaatgtc acaataaact aattgctaaa tctaatactt
     4021 tttcaccatt cattcgacca taatcaacga tatcaataac tgccaccgat acattatcac
     4081 caactgtgtc tatgacctta tctttcatat aattcacttg cggtccaagt aaaatcgcat
     4141 cagctttacg ccaatttttt tcgaaatccg tttctgaaat agcccagata gtcagttcta
     4201 aattacgttc ttctacaacg cgttccattt tcctcactaa aacgcttgta gacattcccg
     4261 cattacacat caacataata tttttcataa aaatccctcc aattaggctt taattctgtc
     4321 attggctttt aagaatggta ggtaaagaag tacgcagacg ccaatcaaga aaatttggaa
     4381 tactgcagca cgccagtccc cacctgttgc aaggaagccg gaagcaacaa ctggtgtcgt
     4441 ccacggaacc attacgacta cttctgaaat catatgcagc tttgtcgcga agtaggctaa
     4501 acataagcaa agcggtgttg aaataatgaa cggaatcatc aaactcaagt tataaacaat
     4561 cggaaggcca aatactaccg gttcattgat attaaataga ccaggagctg ccgataaagt
     4621 agctatttcg cgataatctt ttcgttttga ccaaataaaa attgctatta acagcgcaat
     4681 agtatttccg ccgccgccca taacgccaaa aacatcacgg aaagtagtat taataatatg
     4741 cggaatctct gtgtgattcg caaatgctgt catattttct tgcatatttg ccaaaagaac
     4801 tgggtccata atcggcccta aaatcccact tccagcaata ccgatagaat aaagcatttg
     4861 tgaaatcgtc attaacgtta ggaaccctgg aacacttgta actaagaatg ttaatggttc
     4921 ttgaataatt gcgctaatta aagaatacaa attcaagctg aataatgtca ctactaagaa
     4981 tgaaataaac gcaaaaataa gtattgttaa cattgtcgga ataagcacat tgaatgattt
     5041 aattacggct ggaggtacgc tatccccaga aatatggatt ttcattttct cactcttaga
     5101 aagacgaatg aatacttctg ttgcaagaag cgccgttaca atcccaacga acatgcccgc
     5161 cgaacccatc aaggctattg gtaatactcc agcaacttcc acagatttct ctgcaccaat
     5221 cggcacaatt tctgttacag ctgggataaa aataacaatc agtgcaatgg tcattaacgc
     5281 tggtgcaaac ggattttcaa acttccggtt ttgcgctaaa aagtaagcaa ctgaagctcc
     5341 aatcaaaata gtaataattc ctaaagtccc gttcacaata ctgttaccta gcccctgcca
     5401 agtcgtaagt gtttcggaac tgatgatcgc cgacataaaa ccatccggct taataatcac
     5461 gttattaatt aaaaccatga atcctgctaa cataataaaa ggtaaaatag tagcaaatgc
     5521 atcacgcata gactttaaat gaatttgatt tccaagcttc tgcgataacc aacttaattt
     5581 ctcgatgaac tttttcaatt ttttatacct cctttgatat tacaataagt gtagcgcttt
     5641 ctttttgtta aataaatcta gtctttttcc gcatctgtat tttacatgcg gaaataaaaa
     5701 aaggcccgtt aacttttctc tctaagaaag tctaacgaac cttttggtta tatcgtttgt
     5761 aacacacgca taaattcttc aaaacttgtc acacgtttta gctctcccat tgcttttgga
     5821 ctttctacta aattgctaat aagctcatac accgtcgcaa gctgctgttg ttgcttgttt
     5881 tttaccgcta acatgaaaat cacttgtgcc tgatcttcct cattccactt taccccaccg
     5941 ccagtaaaaa tacatactcc aatagctgtt tcttggacgt ttgcttcaat tgggtgtggt
     6001 gccgcaagtc cattacctaa ataagtcggc acaatttctt cgcgctcaaa aagtgatggt
     6061 aaatagtcct cgccaacaat attattttcc agcaaaagac tcgctaaatc taccagaact
     6121 tgctctttgt cctttttatc actaattaag aataacgatt ccttaaaaac cttgtccact
     6181 tcaaattggt tcttcgtctc atcttgcttc attaacgcag tgatattacg aatatccgcc
     6241 tttgtcaaaa atggcgatac ttgaataaat ggatgtaact tcattcgcag tggtactgta
     6301 gagataacaa agtcacatgc cgttccactc tgctcatatt ctttaaatga gtacacgccg
     6361 actatttcaa gcgtattctc aaactctttt cgtactttag attccaaaag ttgcgacgtc
     6421 cctaaaccag aagcacaaac aatcaatact ttttgcttct cagaccctat ttccttatct
     6481 aagccataca aaaagtgaat agccaaatat cctacttccg cttcgtctac atttgttttt
     6541 aactcctgct caaggacttc tttagcaacc aaccctaatt caaaagctag tggataatta
     6601 gcttttagat tttttaaata cgggttttgt atattcatat taaatttaat tctgttaatt
     6661 gctggcttta aatgcaaagc gatattggaa atcattttct ggtcttgctt aaaatcataa
     6721 ccgtacagct ctttaatctt ttctaacatc ttatccacga tgatatattc tcggtaatta
     6781 ttaaagtcac tttttctgtt tttcgaacta aggtgtagca gcagataggc agtctcactt
     6841 tccgggaaac gaattccttc tgaaagatct atttctttta taataccttg agccgccctt
     6901 aattccggca tactaaattc aatatcctcc aaatctgttg caggtacata acaattatct
     6961 tttacacgac atacagcaat tgcgatatga ataatcaaat ttttaactga aatgtccgtc
     7021 atgtgaatat tatatttcgc tatattagaa acgacaatct gctccatcat ttccaaatta
     7081 acttctccaa aaaaatttat ttctgtttct gtaataagcg ggcttgtaga ttccactaac
     7141 aaatatcttg aaaagcaaaa tcggatagca agttctgcac cagtaattct aatgccatag
     7201 ccagcccgtt tttccacttt caactcattt tctttgagtt ttcgtttcac ttctaaaata
     7261 tccaagttta tcgtagactt actaacaaaa agctcttctg acaacgtctc cagctttaca
     7321 tagtcatttt tgagtaataa atatcgaata atataatctg ctctatcctc tgcaaacatc
     7381 ggtacaatat tcatattagc tcttcctatc gaatcgtcca aaagagcttc acgcagcgct
     7441 ttttcatcac caatgaccag acgatatcct acaccaggaa gtgattcgat tctgtttccg
     7501 cctatcatca gtatttgatt aattacttta atatcatttc taattgtccg agggttaaca
     7561 gctaatgcct cccctaattc tccaccgcta ataaactcca tcttcaaata aagcatatga
     7621 actatttgtt tccatctagg taatgataat tttgaagcac tcacgcagct ccactcctca
     7681 cgacaattaa tttaagctat ttcatcttga ttataagcct atcacctgat aacgacaagt
     7741 cttccagaaa tagtagcaag tatttcgata aaaagcaata tcgttaaaaa tgcctttact
     7801 ccaatcttct agcccaaaaa gtttcacgtg aaacataaaa aagcgaaaac cctaaaaagg
     7861 attttcgctt tgatttattt taaatctgct acatgtgctt cgagattaac accagttccc
     7921 gcagccactc gactagcgaa ttccggatct acttgataga aattacgtaa gttgcggatt
     7981 ttaatatcat cacgtacttg tgaccaatca tcgacaatgt ttttcacgag tgcagcacgt
     8041 tctgcatctg aataacgatc ccatacttct tttgcatggc caaagttatt tggtttttct
     8101 gcaatcaggc gcccagaaat atcaccacgg atttcttgct ctggctcgat aaacgctgga
     8161 ttttcttttg gttctgtatc gtaactattt ggctcataat taatcgaact tgtttgttgt
     8221 ttaaacggca tatgaccgtc acgttggttg ttcgcgacag gcgctttcgg actgttaatt
     8281 gggagttgta agtagtttgg ccctacacga tgtctttgcg tatccgagta agagaataaa
     8341 cgaccttgca ataaacggtc ttcagaagga agcattccac gtacaagtac cccaggatta
     8401 aaaccaaccg attctgtctc cgcaaaaata ttatctgggt tgcggtcaag cgtcattgtt
     8461 cctacgtgtt cataaggaaa tacatcttca aaccaatctt ttgttgcatc taatggatta
     8521 aaatcaaagt tatccaagtc tttcggatcc aacacttgca catataaatc ccactctgga
     8581 tagtctccat tttcaattgc ttcatacaaa tcacgacttg catggttaaa ttcttttgct
     8641 tgaatttgag aagcttgctc cgtcgaaagg ttcactattc ccgcttttgg aatccagcgc
     8701 agttttacat aaactgtttt gccttcttcg ttaatccatt tgaacgcatg aacactagag
     8761 ccacgtattt cgcggtaaga agccggcgtt ccttcatcac tgaataagta cataatcatc
     8821 gtcgtagctt ccggtgtaag gctaaagaaa tcccagtaac ggttgccatc ttgaatattt
     8881 gtgcgtggat caggcttcaa ggaatgaata acatccggaa acttaatcgc atcacgaatg
     8941 aagaataccg gcaaattatt tccgacaaaa tcataattcc cttcttctgt ataaaactta
     9001 acggagaaac cgcgtggatc acgtaatgtt tctggagaat gttgcccatg aattactgtt
     9061 gaaaaacgag caaaaacctc cgtttccgtt ccttcttctt gcaaaaattt agccattgta
     9121 tattttttca tgcttttctt agtgacaaat ttcccgtgcg caccagcacc acgagcatgt
     9181 acaacccgtt ctggtactcg ctctctatca aaatgtgcca atttctcaat aagcacataa
     9241 tcttctatca aagttggtcc tttacgtccc gctgtcatcg aattttggtt atcaccaact
     9301 ggcacacctt gattcgtcgt taaatttttt ctatctgtca tatgtatata cctccataac
     9361 aattctatat cattttttat ttgtaataat tattaaatga tactatttat attttaaaga
     9421 aggaagagac aaacttcaac taaaaggctt aaaaaagaac agacgaccta attcatcgtc
     9481 tgttccctat tattgttcag ctttaactaa aattttcttc acttttcgtt cgaactcgcg
     9541 gcgggggatc atcacactat gaccacaacc ttcgcactta atccgaatat ccatccccat
     9601 gcgtataatc ttaaatcgat tggtaccaca aggatgaggc tttttcattt ccacaatatc
     9661 atttaaatcg aaatgctttt tttccataaa catcacaacc tattcatcat caaactgaat
     9721 atctaaaatc tctaaaatgc gatctaaatc atcatcagat aaaaattcaa tttcaatttt
     9781 acctttttta tcgcgacgtt taatcgagac agccgtacca aatttatcac gtaattggct
     9841 ttcgctttca cggataaaga taggaactct agccggctta attgtttcac gtgaaacatt
     9901 ttcatttaga ttattaacca catcttctaa ttgtcgtact gtcagccctt gcgccacagc
     9961 ttttttagcc gttgggataa tatttttctt aagtttcaaa cctagtaaca ctcggccatg
    10021 tccagctgac aatgagccat cacgtaacat tacttgaact tcttcaggta atgtcaaaag
    10081 acgaacaaag ttagcgatat atggtctact tttcccaacg cgttctgcta attttgcttg
    10141 cgttaagccc aattttttca taaggaactg atatgattcc gcttcttcaa gtggagataa
    10201 atcttcgcgt tgtaagtttt caatgacaga aagctccatc atttcttctt ccgttaaatc
    10261 acgtacaact gctgggattt cttttaattt agcttctttt gctgcacgaa atctacgttc
    10321 accaacaaca atttcatatc ctttatctgt atttcttaat attattggct gcaaaacacc
    10381 gtgaatttta atggagtcac gtaattcatt gattgctttc gtatcaaaga ttttacgtgg
    10441 ttgatatgga tttggcttaa tatcttttat agcgatattt tgtacggttt cttcattcgt
    10501 atctacatta ttaaatagtg cattgattcc tttacctaga cctttagcca tgtgcaacca
    10561 cttcctttgc taattctaaa taaacttcag caccttttga ttttgcatca tataacaaaa
    10621 tcggttttcc atgactaggt gcttcactta gacgtacatt ccgtggaata attgtattaa
    10681 atactttgtt ttggaagtat tttttcactt cttctattac ttgaatacct agatttgttc
    10741 tagcatcaag cattgttagt aaaacacctt caatttgtaa atcctcattg agatgctttt
    10801 ggacgattct tattgtattt agtaactggc ttaaaccttc taacgcgtaa tactcacatt
    10861 gaacaggaat taaaacagaa tctgctgctg ttaatgcgtt taaagtcaaa agcccaagtg
    10921 atggcggaca atcaataatc acatagtcat aatcatcacg gattgagtcg attgcttttt
    10981 tcaatctaat ttcacgagag atagctggaa ctagctctac ttctgcacct gcgagttgaa
    11041 ttgtagctgg aataacattc aaattatcca agtctgtttt ttgcaacaca tcttgaatgg
    11101 ctacatcgtc aactagtaca tcataaatac aatgttcaat ttcacctttg ttaacaccaa
    11161 cgccacttga tgcattacct tgtgggtcaa tatcaactag taacactttc ttacctaaaa
    11221 aagctaggct cgagcttaaa ttcaccgatg atgtcgtctt accaacccca cctttttggt
    11281 ttgctagtgc aatcactttg ctcaatcttt ttcaccaacc cttattttgt accgagattt
    11341 ccggttcttt tatcttctat tctaccaaaa gattttcatt tagtcttaca aaaagtaaaa
    11401 ataaattgaa attcgtattt tgaaagctta aaaatggtga aaataacgtt ttgaaaacct
    11461 agaaatgttt cacgtgaaac attttaaaat aaaaaaagca accaacctaa gctgattact
    11521 tttctatctt caatctacag agaatgttgt cttaacacct agaaccgtgc agactttttg
    11581 atacattcta agagtcaaat ctggatcccc tgcttctaaa cgcccaataa taacaggaga
    11641 taaatctgat ttaagcgcta aatctagttg agaccatttc ttctccattc gtttagagaa
    11701 aatatattta ccaaggcttg ctgaaaaact atctaagtaa tgagcaatgc cttcatttgc
    11761 taaagcttta ttttttagtg tttcgaattg atagtctgca tgaccaatgc ttgtttccgc
    11821 ttcaatacga cgcaagaata cgcgtttgac ttcttcgcgg taagcactca tttgatccgt
    11881 gaacgggttt ttatctttaa aatagccttt aacgaaacaa taataggttt catcgccact
    11941 aaaagcagtg aagtaaatta aacgacaatt tttatcttta aaatgtgctt tcatctcttg
    12001 aatcggttgg tctacagttg tttccactcg agttgtttgt agtgagtaag cttgactttt
    12061 accgataatt aaatggacat cggggagaat ttgcttacca gtgctaagtt ttctcgtttc
    12121 tgctgtttct agttgtaaca ggccttgaaa tactaaagtg gccattagtg gttcttccac
    12181 aattaaattt tgtaagaaat catacgcttg gaactcattt tgttcgtctt tcacaaaaat
    12241 gatttttgcc attcgtttcg tgattccact cagagttgag tgaatcactc cctcctttac
    12301 aactttacct aattctattg tacttttttc tgctcaaaat tgcacttatt ttctctattt
    12361 tttacaaaat aaaccaaacc cactcgaatt gagttgcttt ccttttttga aaataaaaaa
    12421 cccgcttcaa taagcaggtt ttgcagctat tttttcgctt ctttcgcgat ttggtaccaa
    12481 ctgtaaatct tcactatcgc aaagaaagta tagccaaatg cgatgagata tgccccgtaa
    12541 ttaattaata gaatgttgaa gccacttccc caaccagact cttctgctac ggctactgct
    12601 cgggcatagg ggctagtgaa aaagtaggta atatatagtg gattaaaact taaaatagca
    12661 cttgtaatcg ctattacgaa agatggaagt accatcaaac aactaatgac accaactgca
    12721 tgtccaatta tcttcaaaaa cctcactgct acacctctta tttcttttta ggaatttgaa
    12781 tggtaatttg ataaaaatca tctgtctctt cttcggtgaa atctaggtcc attccgttat
    12841 ctttaaccat tgtaaccgat tgtttaatcg tattcatagc gatacgcacg tcacgactaa
    12901 tagcttggcg ttttggtttg gtttttttag tagctactgg ttttttcacg cccaaaattt
    12961 cttgaattct tgcttcggtt tgtttgacgt tccagtgatt ttcagctatt tcggctaaaa
    13021 ttgcgacttg ctgttcttct gtttctaatg cgagtaacga acgagcatgg cgctctgaaa
    13081 tttgtttgtt aagaacggct tcttggaccg tttctggtag ttttagaagt cgcattttgt
    13141 ttgcaatggc agactggctt ttcccgacac gttgcgcaag ggcttcttgt gtcacgtcct
    13201 gcatgtctag taaactccga tacgctttcg cttcctcaat tggcgtcaat tcttcacgtt
    13261 gcaagttttc aattaacgca atcgctgcta cttcttcatc atctaaattt tgaataattg
    13321 ctggaatttt ttccatttct aaagaaagca cagcacgaaa acgacgctcg cctgcaatga
    13381 tttcataata atccggttcc atttctctaa ccacaatcgg ctgaataacg ccgtgaattc
    13441 ggatagttcg agcaagttca tcaatcttat cttgatcgaa tactgtccgt ggttggaatt
    13501 ggttcgggaa aattttatcc ataggaagtt cttgtacgcg ttgtactcct tcttctacta
    13561 tatcatccat ttgattcttc tctttttttc caaataaacg tgaaaaaggc atctgggtcc
    13621 ttcctttccg gaacatctcg gggtttctta atatattatc tggctatccg caagtctctt
    13681 aaactatttt agcagaaatg ctagagaaaa acacgcttat tctgtccttt aaatgtgaaa
    13741 aaatagatag agctgctaaa gtttcacagt cctatctatt ttcttaatga aattcatcgg
    13801 taacggtatt gatggttttt tccatattgt cgcggtaaga ctcattttgt agcaacatca
    13861 tggaaataat atccatcaca tacataatcg aaaactggct attagcaaaa taccttttac
    13921 ttacgaataa agtattgtaa accggaatag tgacgtcact gatttcggtc atttcactat
    13981 tttcaaaact ggtaaatgta gcaactttac ttttgttttt cttagcgatt tttagcgccg
    14041 tgactagctc tggggtgtta cctgaattgg aaatgccgat aacaaaatct tcttttgttg
    14101 tgatggagct agtgataatc atcatatgcg gatcgttgac actgatgacg tttaacccca
    14161 ttcgaataag gcgctgcgac atttcaacgg cagtgagccc cgaacttccg acgccgcaaa
    14221 tatagactcg cttagcttct tgaatgtact gcaccacttc acggatcttc gctggttcaa
    14281 tcagcttcac cgtgttatca attactttat ggtagaacga ataaacctct tcaaaaaggt
    14341 catcataacc aagtgacgga accattgtcg ctgcagtatt cacccgcatt ttcaaatcaa
    14401 caaaactatc acagcgtaca tggcgacaaa atctcgttat cgtcgaaatg gatgtgccag
    14461 tttcttcagc tagctcttta atattaatat tcttgagttc atcacttttt tctaaaatat
    14521 acttcgcaat ttgtttttct ttattcggta atcgattgta attttgttgg atttcattta
    14581 aaatcgtcat ctttttcggc ctctttctgg tttaagaaat gataaagcgc accaatcatc
    14641 cctgcttcat ttcccagctt tgcgaaagta atatctgctg tatcgaacat cggtgagatt
    14701 aatttggttg agatagccgc ttttagacgc ggtttgaaga atgactcttc ttccattaat
    14761 ccgccaccga gtacaatcac ttctgggttg aaaatataga ttaagtttac tacaccttct
    14821 actaaattct caatccattg ctctatttca gccagcacat ctgcatctcc gctataggcc
    14881 cattccatga cttgacgacc atttaacgca ttttcctcga tattttttcg cgaggctact
    14941 tgtttaatca atgcttttgt tgaagcaaca tcttgaaatc tcccttgtga aaggtgcata
    15001 tagcccactt cacatgctgt aaaagacgat ccatttatta gtttgtcgtt tagtaacatt
    15061 gctccgccga ttccggttcc aattgtcaaa cagagcacgc tcccacgtcc ccgtgctcca
    15121 cccaaccaaa actcgccaag gcaggctgca tttacgtcat tttccactac gcacggaata
    15181 tgaaatcggt gctctagttc agcttttatt tcagttccag tgtatttggg aatcgtgtag
    15241 ccagcataaa taattttgcc tttcacagaa tccacaacac ccgcagaggc cacacagacg
    15301 cccgctacat tcgttttttc ttgttcgaca atccgaataa gcgcgggcat gatttgattc
    15361 gctccgccag ttataggcgt cacacaagac ttaagatcgc ccacccgctt accttcttga
    15421 ttaaatttag catatttgat actcgttcca ccaatgtcga cacaaagata attttccatt
    15481 tcttcacctc tttagtgaaa ttattatcct tcttttgtta actcgtcgta aaacgcttgg
    15541 cttgaatttg cttcgatcaa acgggttacc ttttcctcgt ccatgagcac ttctgcaagc
    15601 tctgacaaca cttctaaatg gctttctgag tctgttgccg caagggtaat aactagtttc
    15661 accgggtcga acatgtcgct tccaaaagcc acgccgtcag ccagtgttgc aaaagttagg
    15721 ccaccgcgaa tgacgccgaa ttctggtcgt gtgtgcgcta gggcgatatg tttagcaatc
    15781 actatatatg gtccattatt ttctacactt tgaatcattc cgtcaatata actctctttg
    15841 atagcgcctc gttctagtaa aagtcttgct gatgtttgga tggcttcgcg ccagtctttt
    15901 gcttttaaat ttacctcaat atcttctaaa gtaactcggt ctaataacat gctcgcgccc
    15961 ccttatttat tatattcagc cattatttct gttaaatcta cctccgccag cgactctcgc
    16021 tccaaatagt tcggggttaa atcactatgt tttgttactt catttggaat gacaagaaca
    16081 ttgacacccg cactatttcc cgccaaaagg ccatttcgcg agtcttctac gataagagcc
    16141 tccgatggct taacatccag tgctctcaaa gcttctaaaa acaagtccgg ttccggcttg
    16201 attcgcgtaa catcctccgc cgtaataatc gcatcaaaat atccgagtaa gcctagtcgt
    16261 tccaaatgat agagtggttt tggtcgctgc gatgaggtcg caagtgctaa ttttaatcca
    16321 cgttctttta attcacgaat aaagctttcc acgccttctt tggccggtaa acttttactg
    16381 ttttcaataa acgttgcttg tgtttctgct tcgaagtctt gtcgattaat atccatttgc
    16441 tctgtccggt tgagttcgcg aaacaaatcg tccacatttg acccaacgca ctgcaaaaac
    16501 tcctcgatag aaaggtcata attctgcttc gttttaaacc attctttaaa aatttcatac
    16561 caaactactt ctgtatcaat aacaattccg tcaaagtcca tcacaatcgc ttttaacatt
    16621 gtcttcctcc tacccatttt actattcaaa gcgctcctaa aaagaagcgc ttacaaataa
    16681 gttaattctt ttgttctcgg tctgcaacta ttttatctat cagttcttga tattctggtg
    16741 cgccgaggta atccgttatt tctacataat acgcatctgg ttgcttttct ttggctcggt
    16801 cgataaggga tttatgcgtc acgactacat cgcattcggt cggcaattcg tggatggcga
    16861 tatggaacac tttaatatcc tctaagccag catttttgat ttttttctgt agtacggtcg
    16921 cgcccatcgc actagatcca agtcccgcat cacaggcata agcgattctt ttaacatttt
    16981 taaaattaaa atcatctact gtagcttcga aaacggagga aatactgctc tttttgcctt
    17041 taaggctttc cattttcttc gctgcatctt gtagttcaga gtctttgtta cccatgcgtt
    17101 taataaatgg aatggcagta atgaatgtaa caagtgccgc acatagcacc gcaataagga
    17161 tcttaatgtg atcgccgggt gctgccatca tcatgattgt gataatacta ccaggagaag
    17221 ccacaccaac aagtcccgca tttgtcattg ttaaaataaa tgttcctgtc ataccaccaa
    17281 gaattagcgg taaaataaga attggattca ttaaaacgaa tgggaagtaa atttcgtgaa
    17341 taccaccaaa taggtgaata acacttgccc cgtaggaaga tgctttggag tttcctttac
    17401 caaagaacat atagccaagc aaaattccaa gtcctggtcc agggtttgat tctagtaagt
    17461 aaagcactga tttccctgtt tctgcgagtt gcaaggtggc tagtggactt agaatacctt
    17521 gaccgatcgc attgtttaag aataagacct tggccggctc aataattaaa gccgttagtg
    17581 ggagcaaatg attattgatt aatacatcca cgccacttgc taatactttt gttacagctt
    17641 cgaccattgg agcaatcgcc acataagaaa atagtgctaa tcccgctcca attatcccaa
    17701 tcgaaaagtt gttaactaat agttcaaatc cagctggaat ttttccatca atacgttcat
    17761 caaatttttt gagtatccaa gctgcgagcg ggcccattat cattgcgcca ataaacatgg
    17821 ttatatccga actaataatt gctcccattg tcgcaacagt accaataact ccgcctcggt
    17881 aaccgtgaac cgctcgacct ccagcaaagg caataagaag tggtaacaag taatttagca
    17941 ttggtgcgat gaaccctttt aacatctcag agcctgtagc caccccaatt gccgttaaaa
    18001 taccccaagc cataaaagct cccaaattcg gaatgaccat accacttagc ttactcccaa
    18061 acttttgtac atgtacccga atagacatat ttccccctcc aatcatatgt gtggcgcaat
    18121 tttatagtga tacttctttc ccctcagcaa tcgaacgttc aatcgcatct actactcgta
    18181 aggaatcata cgcttctttt ggtgtaataa ttgattttgt gttattcgcc acgttattaa
    18241 taaatgccat tacttcctca gctaaatcgc cggaaacttc gccatttgtg taataccagt
    18301 gtcttgaatc cggataagat accccttttt cactaacaaa acgaacaccg tggtcgcaag
    18361 agtctacata tgctacgcct tttgttccga ctaattcaag tttgtcgtca atgatggttg
    18421 gcgaattttc tggcaagacc cagcaagctt ccaggcaagc aattgcgcca ttttcgtacg
    18481 ttacaatggc ataaatcaca tcattcatgc cgtattcttt aagtaaaaca ctgcgacttt
    18541 tggcaataac tttgactggc tcgctatcca tgtaccagtt aatataatca atatcgtgaa
    18601 tcattacgtg catacttaaa tcagaagcac ctatgtaacg ctttggcccg gtaattggac
    18661 tgttacgacg acaataaaga tgaataatat cacccaattc gccattatcg aggcgctgtt
    18721 taatcatatt aaaacgagga tcaaatctga gtaaaaagcc aactgtaaac actttgtcgt
    18781 agtctttggt cagttcatac attgctttgc cgtcttccag ttcttttgca agtggttttt
    18841 cgagtaaaat gtgttttttg tattttacgg cttcttccac gcaatcacgg tgcatattat
    18901 caggtaaaac aatgctcaca gcttcaatct ccgtatttgc tagaagttcg tggtagtctt
    18961 tgtatgcttt acactgaaat ttttctgcca tttcggcgcg tctttcatcg ttgtactcac
    19021 aaattgctac taactctact tgcggaagct tttggtaaat ttctgcatga tactgcccca
    19081 tttgtccaac gccaattacg ccaactttga tttgctttgt catatcactt acctctttct
    19141 tcttagattt ttttaatttc atttgtaaag cgggtggtta tttcctgtgg ccgagttact
    19201 gcgccgccaa caacaacggc ataacaacct aacgtaagaa cttgtcgtgc tttactaggc
    19261 gaatcgattt tcccttctgc aatcactggg cgcttcgtac ttttcaaaac ttctttcaaa
    19321 tgggagaaat cgtcgtcgct gatattttta ttcgctgttt cttcggtgta gccgtaaagt
    19381 gtcgtgccaa ttaagtcaaa accgagggaa tcagcgtaat aaacgtcttc aatactacct
    19441 gtgtctgcca tgaaaagcgt gtttggaaac tcttttcgaa tggcacttag tatgtctttg
    19501 aggtcttcgt tatgtggtct ttttctcgtt gttgcatcca tcgcaacaat ttctactccc
    19561 gtttcacata tttctctgac ttcttctaag gttggtgtga taaatacgtc cgaatcatcg
    19621 tagtcttttt tgtaaatacc gataatgggg acgtcgatct cactttgaat tgccctaata
    19681 tcttttgcgg tatttgctcg gataccaaca gcaccacctt gaactgcggc cagagccatt
    19741 ttcgacataa taaatgcact atgaagtggt tcgtcttcta aagcttggca ggaaaccact
    19801 aacccgcctt tgattttttc cataacagaa ttgcccactg atactcctcc tctatactgt
    19861 gtttcagtgt aaagtatgcg ttttcaaaca gactatatca taagaaaatg attttatcaa
    19921 tatcaattaa atgaaaatta ttttcatatt ttagtgtggc tagttgcgga aactagcttt
    19981 aaaaaatgac gttgctgtta aaaataaaaa gtcctttcgt ttgaaaggac tttgttagtt
    20041 tattcgattg gtaatttgtt gggtgttccg ggtttgcgtg gatatttgtt gggggtttct
    20101 tttgttttcg tgatgacgta gatattgcgc tcgctttctt ctactggtag gaagaaagag
    20161 aagtgttcct cgacttttcc gccgaatagt ttgatggctt tttcggcagt ttgcagctct
    20221 tgttcggctt gggctgcttt cattactaag aacgaaccgc cttttttgac aagtggcatg
    20281 caaagctcgg ataatacgct cattcttgct acggcacgtg cggttacaag gtcgtatttt
    20341 tcgcggtgcg ctttgttttg accaaatgtt tcagcgcgat catgataaaa atgcacatcc
    20401 gttagaccta atttttctgc tagcgcatca aggaaagtca tgcgtttttt caaggagtct
    20461 acgatgctta cttttagatg cgggaagcag attttaattg ggagacttgg aaaaccagcg
    20521 ccagccccga catcacaaat cgtatcgaac ttagtaaagt ctacataaac cgcggcagag
    20581 atagaatcgt aaaagtgctt taaatacact tctttttcat cagtaatagc tgttaaattc
    20641 attttttcat tccattctac taacatttcg aagtaatcgt ggaattgttt tagttgcgtg
    20701 tcgcttaatt ctattccttt ttcagcaagt gctgtttgga attgctctgg attcatattt
    20761 tttcctcact ttattttcgc gatttttgcc gtgtttagga tggtagacgg gtttggttta
    20821 tacttttaaa caggcttgta ccatatattt tagctcatta ttttcaagta taagtatttt
    20881 cgttcttttt agcaagttcg tattacgttt aacaattatc aaacttgttg gcattctctt
    20941 taaaactttt tttggcttga tttacccatt ttccttctgc tgtggtggaa agtccatcta
    21001 tgtaaccctg acaattgctt tttatatctg ctattttgtc ccgtttgatc attttgaaca
    21061 ttcgtttgcg attttctgat gttgcatgag tttggctcgc cacaaacatc ccaataagat
    21121 ttttttctag atttctgcgt gactctaata attctgcttt tagtttatct atcatgttat
    21181 agatcacgat ccttttttag ctgatgtagt tcttcttcat aagaattcac ttgtttctta
    21241 taaagtgctt gatgctcttc gtgttcattt tctagctttg ttagtgtgtt ttttactttc
    21301 caatcgcctt cttcttggat agaactgatt aaatggtagg ctttttgcaa gtcttcagat
    21361 gcttcgtaat ctcttttttg atggatatac ctgatttgtt cagaaaggtt ttctagttct
    21421 tggtgaaacc gccatttttc ttgagatgcg tcgtccatcg cttcgtccaa ttgtcgtctt
    21481 tttctattaa aatcattatc taaattttct agttttagca gtagttgtct ttgtttatcc
    21541 atacatgctc cctatttgtt tggctaattc ttggtcggtt tttagctggc tttttattgc
    21601 ttcgttgatt cgttctagca atttatcata ctcttgttct attttggttg cttcgactaa
    21661 ggatttttcg caatcttgca ctgtgtctat cacaatttcc ggctcagtcg ccccgcccca
    21721 agcaagtgcg gcgagtattt ctgactcata tagattggag ccgatatccc ttgcatctga
    21781 aagcgtatcg cgccacaact cttcagcatt ctcgatttct ttatcaaaaa catcttttaa
    21841 agctctaatt tcgccttgaa tcgtttgttt catcccttgc gtaattgcta gtgcttccgc
    21901 tgcatccaag aatatttctt cggatgagga taggccacca ccgctttttg taaaactggt
    21961 tcgcatgatg ttgatagctg ctaattgttg cgctgttacg tatttagcta attgaaggct
    22021 gccttcttta tttgttagga tgtttccttc tttgtcaaac tgataaccac cccacatatg
    22081 ttgctcaacc ataccagctt ttttcgactc aacctctatt aaatggccaa ttgtcgggtc
    22141 tccgatacca taaccaattg gcacataatc cttcctatca ataaaattaa ataatctatc
    22201 taaagcgttt attgctttta cggtatcttg ttgttttggc gttaggttgg agtagatatt
    22261 cgggccttgg tagaagaaac cgccgctgat gcgtttgatg tcttttttat ctaagtctgc
    22321 gatagcgtac tgggcgttca tggagcctag agaatgaccg tatacataga tttgggcgtt
    22381 tgggtagagt ttcatggttt gttttaaggt ttctgcggag gtttttagtt ggggtgttac
    22441 tgtggatcct ccgccatttg tgatttggat tgcggttgga atatcattac ttaaccagtc
    22501 cttcctcaca tctttataat ctggatgttt tggaacatta aagtttccat tagccggtgc
    22561 ggtagaacct ttgtaaagga ttgttagttc ttttactttg tttctttcgc tgatggaggc
    22621 tatgggtggc gtgtatttgt ctgtgatgat gtaggattgt tccccggttg atttgttgtt
    22681 gattttttgg gatacgattc cgatggtatt cgttcctcca ttgacttttg agatagttac
    22741 atcttctgta aggtataaat tatcatactc ttttcgcgcc agtctcattc tttcgtaatc
    22801 attattaggt agactcatga gttctccttc caacgaccta acagcttgga aagttttcca
    22861 gctatacttg cgcttccaca ctctaatttg ccattaaatt tatccaaagt atattttata
    22921 tacaattctg gattttcatt tatgattact gtaacattaa tacctcccat aggattgtga
    22981 ttaatgcttt tttcatcaat ttcatatgat tgaattacgc cttctttagt caatgctttt
    23041 gtatctaaat cctttaagcc tttgtaaaaa gcatttttcg cttcatcact ataaaccact
    23101 tttatcattt ctttatttaa tttctcttcg tccatataga atttcacccc taaaccaaaa
    23161 atggttatta ctgtaattgc taatattatt atccatctct ttttcaactc ttcacctctg
    23221 ttgtatgact ttttatttgt aggtctattt tatcacatgt tagaaatttt cactttcttt
    23281 tttttcagtc ttttaatcgc ctctcagctc tataaaaatt catttataac cgttcaaaag
    23341 ccccaattgt tttgtaagct ccttagatat gcttgctcca ccactcttta attcttcatt
    23401 atttttttca acgtgtatgt taatttcaaa gcaggatcct tgttaataac taatgcaact
    23461 attattccgc ccattggatt aggctctata ctttccttgt caacttcata tgattgaatt
    23521 agcccttctt ttgtaaatgc tttcgtatca ataagtttta tatcatcatt gaatacttct
    23581 tttgcttcat tgctacaaac cacattcatc atttctgtat ttaatttctc ttcatccata
    23641 taaaatttta tccctagacc aaaaataatc attattgcaa ttccaaatag tattatccat
    23701 ctctttttca cacattcacc tctgttttta ttttcttagt tgtctaataa ttttcctaat
    23761 tttgcagaat ttccgccacc atcatcaatt agttttttgt catcagcttt attcaatgta
    23821 aaaaaaacat ataactcaga atctccatta acgtgcaaag taacattgat tcctcccata
    23881 gggttttgtt tgatactttt cttatcaatt tcatatgtgt taattacacc cttcccagtc
    23941 aatgctttag catccaaatt tttcaaccca ttttcaaaaa ctcttttcgc ttcatcacta
    24001 tatactacat ttatcatttc tttatttaat ttctcttcat ccatataaaa tttcacgcct
    24061 aatcccgcaa caatcattac tacaactacc attgctataa accacctctt tttcacacat
    24121 tcacctctgc agtatgtctt cttctatgta atcccaatct accttaatta aaaacaagaa
    24181 aaaaccacat tattcagcgg aaactttcaa cttaaacggt aagtttgaag ttttcgtgaa
    24241 catgtggttt cagtaattat agtaatccgt gttcttattt acttatttta gctatctttc
    24301 cttgctcaat ataaactaac aaaatagata tatcggctgg gtttactccg ctgatacggc
    24361 tcgcttgggc gatggaaagg ggttcgattt tctttaattt ttctagggct tctgttgcta
    24421 ggccgctgat tgcatcataa tcgatgtttt ctgggatttt cttgtcttcc atgcgtttca
    24481 ttttttctac ttgaaggttg gatttttgga tgtagccttc gtatttaatt tgaatttcta
    24541 cttgttcagc gatttcgtcg gtcacaaatg tttcacgtga aacaatttgg gcgatcttgt
    24601 cgtaagttat ttcgggtcgg cgaagtaaat ctgctgctag aattccgtct tttagctcgc
    24661 ctgagccgat ttcttttagc attgcttgga cttcagcagt tggtttaatg cgtgtttttt
    24721 gtagtctttc tttttctgct tcgatggcac tttgttttgc taaaaagcgt tcataacgtt
    24781 cgtcgctaat taagccgatt tcatgaccga tttctgttaa acgtaaatct gcattatcat
    24841 ggcgtaatag caaacggtat tcggcacgag atgtaagtaa acgatatggt tcttcagttc
    24901 cttttgttac taaatcgtca attaaaacgc cgatataagc ttggtcacga ccaaggataa
    24961 ctggttcttt ttcaaagact ttacgtgcgg cattgattcc tgccattaat ccttgtcctg
    25021 ctgcttcttc gtaaccactt gtaccattaa tttggccggc tgtgaaaagt ccttcgacta
    25081 atttagtttc aagtgatggc cacagttggt ctggcataac tgcatcatat tcgatagcgt
    25141 agccaacacg catcatttct acattttcaa gtcccggaat agttcttaac atttcacgtt
    25201 gcacttcttc tggcaaactg gtggaaagac cttggacata tacttcttcg gtatttttgc
    25261 cttctggttc aaggaagatt tggtgtcttg gtttgtcgct gaaacgaaca attttatctt
    25321 caatggatgg gcaatatctt gcgccagtgc ctttcttcgt tgctgtaaac attggtgaac
    25381 ggtgtaagtt cgcttggatt atttcgtggg ttgtttcgtt ggtataagtt aaccaacacg
    25441 gtagttggtc aagcaacatt tccaccgtat caaagctaaa tgcccgcgga tgatcgtcac
    25501 ccggttgttc ttctgttttt gaatagtcaa tcgtacttga ttttacgcgc ggtggtgttc
    25561 ctgttttaaa gcgacgcagt tcaaaaccta gttcttccag gtgttctgaa agtttcacag
    25621 aaggttgttg gttgtttgga ccgctggaat agcgcagttc accaacaata atttcgccac
    25681 gtgagaaagt tccagtagta ataacgactg ttttcgcgta gtaaatcgcg ccactgtttg
    25741 taataacgcc tttacacacg ccatcttcaa tcactaaacg gtcaacaagt ccttggcgca
    25801 aagtgatatt ttcttctttt tcaattgtgt gtttcatttc gtgttggtaa tcccatttgt
    25861 ctgcttgagc acgtaatgcg cgaacagcgg gacctttacc tgtatttagc atccgcattt
    25921 ggatatacgt tttatccgtg ttgcggccca tttcgccacc aagagcatca atttcgcgca
    25981 caaccacgcc ttttgctgga cctccaacag aaggattaca tggcataaaa gcgaccatat
    26041 ctaaatttat cgttaacatc agtgtttttg cgcccattcg accactggca agacctgctt
    26101 ctacacccgc atggcctgca ccaacaacga tgacgtcaaa agttcctgca tcataggttt
    26161 gcattttata aaaacatctc ctaaaaaatc attttccaag gcaaaattga ttgaacaact
    26221 gatcgagtaa ttcatcctgg acagaatcac cagtaatttc acctagtaaa tcccatgcac
    26281 gagtcatatc aatctggaca atatccactg gcataccgag ctgaatccct gttgtaacgc
    26341 catttaaagc ttcaagtgct tggtgaagga gcgcaatgtg tcgaacgttc gatacatatg
    26401 ttgcatcacc cgcatcaatg tcacccgcaa aaaacagtgt tttaatcgct tcttctaaag
    26461 cctctaaacc ttcatcgttt actagagaag tggaaacaat cgggttttct ccagcaagtt
    26521 cacgcactct atctatatca agctttgttt ccaaatctgt tttatttaaa acgaccacat
    26581 aattatgacc cgcggctgct tcaaataacg cttcatcttc cactgtcagc tcttcgtttt
    26641 gatttaatac tagcaggata aaatcggcat ccgccaaggc ttttcttgaa cgttctacac
    26701 caattttttc cacaatatct tctgtctcac gaattccagc tgtatcgatt aaacgcagcg
    26761 gaacaccacg aacattgacg tattcttcta taatatctcg cgtcgtcccc gcaatatctg
    26821 tgacaatcgc tttttcttct tgaattagtt ggttaagcaa ggacgatttc ccaacatttg
    26881 gtcgaccgat aatggctgtt gccaatcctt cgcggagaat tttcccttgg cttgctgttt
    26941 gtaaaagttg ctcgacggaa gcgcgaacta gctcggtttt ctcgagtagc attcgctgag
    27001 tcatttcctc cacatcatca tactccggat agtcgatatt tacttcgact tgcgctagtg
    27061 catccaaaat ttcttgacgt aaattgcgaa tcaaccgtga aagatttccg tccatttgcc
    27121 gaattgccac gcccatcgcc cggtctgtct tggcgcgaat taagtccatc acagcctccg
    27181 cttgcgacaa atcaattctt ccatttaaaa atgcgcgctt tgtgaattcg cctggttcag
    27241 ctaaattagc cccatttcga agtaacagtt gcaacacgcg gttcacggaa acaattccgc
    27301 cgtgcgcgtt gatttctacc acatcttccc gtgtaaaagt acgcggcgca cgcataactg
    27361 tgaccattac ttcctcaatc acttcgccgt cttcttttat atgaccgtag tgaatggtgt
    27421 gactttctgc ttcacttaag ctatttttgg cataaaaaat acgatccgct atctgaatcg
    27481 cctctggacc gcttaatcta ataatagcaa tggccccttc tcccggcggt gttgagattg
    27541 cagcaatagt atcaaattcc attctttact catcctttct cattagaatt tcagctcaaa
    27601 taagccttat cctattttga ataaattttg gcacatgatt ttgtgcattt tcaacaactt
    27661 acgctccgct ttgaccaaag caattaaatt gttagtattt tgaaggttat ccatagactt
    27721 attaacatat ccacagaaaa accattaata aaaattcatc cataccattt taacttatcc
    27781 acatgtgaat aacaatagtt ttatccttac tagttaagaa aacttaaatt ttctagttaa
    27841 agctttaact tatccttcca cttccttggc tttaactcaa ttctttttat ctatactaaa
    27901 gttaaaagga ggagaaaaaa tgaaaataca taaactaact tgggtgctat taatggggct
    27961 actactgctc tcatcctgtt ccacaaagca accaaaccta tatttgtcag caaatgccgc
    28021 cgcggtttat tcagtcgaaa atggtgaacc gttatatgaa gaaaacgctg ataaagtaat
    28081 gccgattgcc agtttgacca aattaatgac agctttttta gttttagagg ctgtggataa
    28141 caatgaatta tcgtgggatg aaaagcttga tcttgttcga ttggatgatc cttccgcggt
    28201 ttccctttac gcgattacac aaaagagaac atggtccgtc agagatttat acagcgcgat
    28261 gctcactatg tctgcaaatg atgccgcgga aacactggga gatcgtttag acggagctaa
    28321 ttttcccaaa gaaatgaata accaggctaa aaaattaggt atgtcgagta agactacatt
    28381 tgtcagtgct agcggacttg atgttgacgg aaaatccgct gtttctacca caaaggattt
    28441 atttttgcta tcatctaaat taatttccac tcatcctgaa gtgttagaga caacatccaa
    28501 atctagtgtc accactgaca aaggcgccaa acttgaatcc accaatgact cactcggttc
    28561 gattcaaggc ttagatggac tgaaaactgg atttacagat gaagcaggct attgctttat
    28621 tggaacagct gaacgtggag gaaaacgtgt gatttcgatt gtcctagatg cgggaactgc
    28681 ggaaaaacga tttaaagata cagagaagct gatggaggtt ggatttaaag aaaattaacg
    28741 aatgaaaaga acctctcttt cgctgagaag ttctttttta aatagttcag catcaactct
    28801 ttaaagcgca tagatacttt tccatgtata catctttatt tttagaatta tattgcataa
    28861 taaagcgtgg atgttccaaa ggtatgattg tatcaaaaaa atgatgctcc tcatttattt
    28921 tcgataaaaa attaaaattc tcgccgctgc caatgcagta acagaccgaa gtatctatcc
    28981 cgcaatctat ttggttttga agtgattcta aaataattgg cttcagcgcc tcttgtagtt
    29041 tcttattctc ataatagttg caattaacct cattgccttt tgcattcata cgaacaatac
    29101 caagcgggca gacaaaattc atataaaaat cagtataaaa tgcctcacaa ccgccgtatt
    29161 ctgtcataac atcatataaa aaatctgagg aagactggtt tatataaaat ttatcaataa
    29221 aaataccggt ttcgttttga aggtgttttg cgtcttcaaa aggaacgcct gtcacagcag
    29281 aacctctccg cgcgggagaa cttccaagta ttatccggcg cagtttagta tcattatagt
    29341 atttctgata aaatgtggtc gttatttttt gcactagttc gctttgatca ccagaatatg
    29401 ggttaacggt gcgatacccc tccggcaaat caaacgaact attcgcaagc gcctcattaa
    29461 actgcaatat tcgtttagca atagttgtat tttcagtcat gtaaattagc cctctcttta
    29521 tttttatttc acaatatgcc aaacatcctc aaataactcc gcataacccg cttgctccca
    29581 cctgcttgca aaataaggat tatgaaaata agtgaacgcc gtaataatcg cgtttccttg
    29641 gttcgttcga ccgctcactt cttcggcttt ttgtgctaaa tgggctacgt ggtttttcac
    29701 taattcttca ttttgttcaa tataatccgt ataaagtaaa aacatttttc ggtcggtttt
    29761 gtatcgtttt ttcttagtat cggccaagag ccaaagccag tcgtgaagcg catcatctgg
    29821 tgtttgccct gcttcctgtg tccaatcgaa aatctcccgc gaagtttcct ctaaccaacg
    29881 tagcgccaat ttttgaaata aatcctcttt atttcgataa tgcttataaa gtgccgcatg
    29941 tgtgacgttc aaattacccg caatatcata cagcgtcgtt ttttccatgc ctttttcgta
    30001 aatgattttc tctgccatat ttaaaataat ttcttgtgat agtctcgcca ttttaacccc
    30061 tcgattcaac tcattctttg ctttttatta tacaggaaaa cagaaaagtt acaaatcctt
    30121 gacaaagtaa ctaaaaggag tatacttcca actataaagt tactaaaatt aaaaaaagta
    30181 accattttga atttaaagga gcgaatagat tatgacaaat aaacgtgttg catttatttt
    30241 agggggttct ggcggtattg gtaaggcagt cgtccaaaaa ttggtcgaac aaaattttgc
    30301 agttgtggtt cattattcgg gtaataaggc taaagccgag gcgcttgttg aaaacattgt
    30361 gaagtctggt ggagaagcga ttagtgttgg cggcgatgtt gctgacgagg cgcagatgac
    30421 tcgtgcattt gatttcattg aaagccagtt tggtggaatt gatgttgtcg ttaacacggc
    30481 aggtattatg aaattaagtc cgattgctac tttggatatg gatgaatttg acctgattca
    30541 gcgaaccaat gtccggggca cttttgtcgt ttccaagcaa gctgccctca gagttcgaga
    30601 tggcggcgcg attatcaatt tctctacttc ggtaacgcga accagttttc cgacttacgg
    30661 ggcctacgtt gctagtaagg ccggggttga gtcgctcaca ttgattctgg cacgcgaact
    30721 tcgtgggaaa gatataaccg ttaatgcagt agcacctggc ccgaccgcca ctccgttatt
    30781 tttgactgga aaagacgata aaacaattga caacttagca aaagccacac ctttagaacg
    30841 cctaggacaa cctgaagata tcgcagaaac cgtagcattt ttagccggac ctgcacgctg
    30901 ggtgaatggt caagtcattt tcaccaatgg aggattagct taattaaaaa aggaggaaaa
    30961 cagagctatc tggttttcct ccttttattt tattggtctt ttttaatcgc taaaacaatc
    31021 aatcccgatg ctaataaagt taacgccaag aacagaaaag ccgattgata agagttagtc
    31081 gcgtttacca aatcccctat aatcatcggt gcaaaaaagc cacctaaaac tcctcccgag
    31141 tttatagccg cgtattttgt tgcaatgtgg ctctgctgaa acaacttgtg cggcaatccc
    31201 attagcgttg taaaggccat gattaggaat atattacata aacacaagca aataaccgat
    31261 agcgctaatt gttcaaataa atacaccccg tataccgcga acgccccaag cacacaaaat
    31321 gcgaaaataa taatcggctc ttttcctttg aaaaaacgac taatgaaata gccaccgaca
    31381 actcctgcaa ttaaaataca aaggccagct aaagaactaa tatagctcac ttcgctaata
    31441 gaaatccctc taacctcatt caaataagaa gcaagccaac ttgttaaacc gtagttcgct
    31501 gcatttataa aaagcgctga tagcaaaaga atccaaagct gtttatcttt caaaagttct
    31561 gagaaaggta ctttgatttt ttctttttga gcatttagat ctattttcgg cgctttaggt
    31621 acgacaatta aaatcagaaa gccaatcaaa atcaccgcaa taccaatcca gtaatatgta
    31681 ttgcgccaac ccactgatag caacagttgc gcgattaaca atggcccaat aaatgccgca
    31741 aaaccagagg aagcaagcat tgcggactga gcaaaacctc gcttgttcaa cggaatatga
    31801 agtgaaatat aattgctgac agacggggga taacctgcgt gtccaagcgc tccggataag
    31861 aaacgaataa caaccaaaaa taacaaggaa tagccaaagc caaaaataac aagaaatagc
    31921 ccgacaataa taattgatac cgcaagaact ggtcgtgcgc caatccgatt gtttaaatac
    31981 cccattggaa tttgaaaaag tgtgtaacca agaaagaagg cacttaaaat caaccccttt
    32041 tgacttggat caaatcctaa atcctgagaa acagtcacaa gcgaaattcc aatagtatat
    32101 ttatccacgt atacactggt gtagcctata aatagaacaa gtaacaccat taacgaatgc
    32161 ttttctcctt ttacctgatt catttgaatt cactccactc ttctatagtc ccgccaattg
    32221 caaaagagca taaccagatt ctttttctga ctatgctctt ttcaaagcta ttatccattc
    32281 aatttataat aatctaaaac cacgtccgca accgatttgg cagcaactaa caacgcatct
    32341 tcatctatat caaattttgg atgatgatta aaataagcat tcgaagtatt tttcggtttc
    32401 gcgccaatat agaagaagac tccaggaatt ttttgtaaat aataagcaaa atcctctgat
    32461 ccggaaagca tgtcgtattc agaaatgccc gttaagtact cgccaacacc tttttgcaaa
    32521 cttgcaacta cttgttctgt tacagctgga tcgttgtaaa gtggtgggta gtcgttcgtg
    32581 tacgttagtt ccaccgttac accaaacatc gcttccatac cagcaacaat acggtggatt
    32641 tctgcatcca ttttatcacg gttttcagta ttcatataac gcacatcgcc ttctagctcc
    32701 actgcatctt taataacgtt aaaactacct ttaccatcga aagaaccaat cgttataacg
    32761 cccgtatcaa atgggttcaa acggcggctc actactgttt gaatggccgt cacaaaataa
    32821 gcacccgcga caatcgcatc attcgccata tgtggagacg aaccatgccc gccaacacct
    32881 tgaattttaa gtttaaaata agtgcgacca gccatcgcga agccactatg ataataaact
    32941 tggccgcttt caccaaatgg aaatacgtga ataccaaaaa tttgatccac atcatctaaa
    33001 ataccagatt cgacaacgct tttcgctccg ccgggtggtg tttcttcggc atgttgatga
    33061 acaattttta tcgttccagg gatgttttct tttagttgga ttaaacaatc tgccaaaacg
    33121 agtaaataag cagtatgtcc gtcatgacca catgcatgca ttacgccagg ttttttagat
    33181 ttaaatggta attccgtttg ttcttcgatg ggaagagcat caaaatcggc acgtaaagca
    33241 atcgttttcc ccggtttccc gcctttaatc gttacaacaa ccgcatgacc atttcccact
    33301 tcggttgcca tttccacgtc ttttccttta taaaaatctt ggatgaactt tgcggtttct
    33361 gcttcatgga acgataattc aggatgttcg tgcaaatgac gtctaatctg agtgatttca
    33421 tcttttcgtt cctgaagcat attcattaac ttggtacgca tgataaatcc aacctcctat
    33481 tcttttgcgg cttttaattc gagcgctttt ttcgcagacg gtgttgttat agcaacggaa
    33541 ataagtgaca cgacacaaaa accgacgtta gttaaaagcc ccaccattgc ggctaaatca
    33601 atatttccag aaagtgcaat cacaccataa atcgtagcag aaattgccac accgaatgag
    33661 ccacctaacg aacttgccat tttgtaaata ccagatgcta ctccgacttt atcttctgga
    33721 gcattagaga tagctgtatc tgtggaagga gttgcataca taccaagtcc aatcccgaat
    33781 aaagcaaaac cgataaacac aagcactgta taaagggttc ccggaataaa cgtcagcgcc
    33841 attaaagcaa taccaacagc cgtaatacca gagcctagaa tcattggttt acgcgcgcca
    33901 acacgttgaa gaattttttc accaatacga atcattccaa gcacacagac aaggtaaccg
    33961 atagaaagta aaccggattg gaatgctgta aaaccgcgac caatttgcac ataagtattt
    34021 gcaacaacta gtgttccagc agctgcattt aacaagaagt tggaaagtgt cgcaccagta
    34081 taagctttat ttttaaataa cgagaaatca ataaatccgt tcgcttgtcg taattccacc
    34141 cggaaaaata atcccgcaga aataaggaaa acaacgagca ttgtaatagt aattgggctt
    34201 gtccagccaa atgtggaacc acgagtgata ataagattta agcaaaccat tgcgataaca
    34261 aaaagaacaa gaccaaatga atcaaatttt gcttttgtat tttgaacgac tttactttct
    34321 ggagtacctt taataagtag cattccaagc agtgcgaata cgatggaaat aatgaaaatc
    34381 cagcgccagc ccatgtatgt tgcgatagct ccacctgcga atgaacaaat acctgatcca
    34441 ccccatgagc caatcgacca gtaactaagc gctctttgtc tatcagcccc ttcaaaataa
    34501 gttttcatta gggcaagggt tgctggcata atacaagcag ctgaaagccc ttgaataata
    34561 cggccgataa taagtaacgt cgccccttga gtgacaacaa gtaacagtga accgatgata
    34621 ctaagaataa gtccgatata agttaatttc acgcgaccaa atttgtcagc cataccacct
    34681 gctacaacga taaaaatacc tgaaaatagc gcggttaaac tgatggcaat actaagtaaa
    34741 tcagaggaaa ttccaaggtc agattgcacg gccggaacga tattcaccat tgattgggcg
    34801 aaaagccaaa acgtgataac cccgaaaaca atcccaacaa taagtttatt tgtaccttta
    34861 tacgctgttg aagtcattag ttattctctc cttttaagta atctacaaca caagctccca
    34921 tggcttttga tgcaattaat aatgaatctt cattgatgtc aaattttgga tgatgatgcg
    34981 gataaaaatg cccatctgcc ggcatcgctc ccacatagaa aaatgagctc ggacgttctt
    35041 ttgcataata agcaaagtct tctgatggtg gttgcggttc acagcgcaca acatctgtaa
    35101 tttctggaat tttcgcccct ttaatagatt taacaacaaa atcagtcaaa gcttcgtcat
    35161 tatttaaaac aggataatca tttttgtaat caagttcaca agtaacgcca aacattgcct
    35221 ctattccgct aacgatacgg gtaatttctt tttgaataat gttgcgtgcc tcttcagaca
    35281 tagagcgcac atcgccttca agctcaaccg catccttgat gacattaaaa ctaccttttc
    35341 catcaaaaga accaatcgta attgagccga catcaaatgg gtttaaacgg cgactaatca
    35401 ccgtttgaac agctactaca aattcacttg ctgcaacaat agcatcattc gctaaatgcg
    35461 gagatgagcc atgtccacct tgaccttgta ccttaagttt aaaataagag cgaccagttt
    35521 gaattgcacc ctcacggtag aaaacttcac ccgttttcat cgtagacatc acatgaatcc
    35581 caaggacatt atcaacacca tccagcgccc cgtcttgaat catttgaatc gcgccaccag
    35641 gaggagtttc ttccgcatgc tgatgtaaaa taactatttt cccggttaat tcttgtttca
    35701 tttcaataag tgtttcgccc aaaataagca tgtaagctgt atgtccatcg tgaccacaag
    35761 cgtgcattac accagggttt ttagatgcaa aagctagacc agtttcttcc gttatcggca
    35821 gtgcatcaaa atctgcacga atcgcaagtg tcttgcccgg cttgcctgta tcaatcgtta
    35881 ctacaacgcc attcccacca acatgcgtcc gcacatcgca gtccatttct ttataaaaat
    35941 ccgcaatata cttcgccgta ttttcctctt gaaaagaaag ttcagggtgt tcatgtaagt
    36001 aacgacgaat ttctatcatg cgatctcgtt tttcgtctag tttttgaaat aacttctctt
    36061 tcattgtcca aacctccatt tttaatactt ccgctggcca gaacttccgt attttcacta
    36121 caacttaatt ataaaaaaaa ccaagcgaaa agaagtttac ttttttgctt agttttagct
    36181 tgaaattttc ttcttttgta aattactcaa accaatgtca aaaatccggt gctgaagtca
    36241 caaaaaaagc tcaactgcta gagttgaact ttttaaaccg tacttctaaa ctcataaaaa
    36301 tgaatcgcat taatatctaa ataagcataa aacgaccaat cttccgtaat cgtttcatca
    36361 ctcaccgtaa gtgtaggctg agaggcatcc acaatatagt ccaaaatctc tttatctagc
    36421 ccatacttac tgttcagttg ccaatacttc gaataaagtg ccccattgtc acggtcgaat
    36481 tgccatttac agacttgata atcacccgcg taaagccctg taagtctaat atgcacttct
    36541 ttttgttctt ccttaatgaa cctttcctcc acagaataac gcggattaat cgtcgcacag
    36601 ttcatcaaaa taagctgata accgtctgcg tgcttcgtca taatataatc ttcaccctta
    36661 gcaaccacaa cacccttaag ccttctcaaa aacttcactg cataaaacgc cggtcgttta
    36721 ccattgaaaa agtggaacat ttcaattccg tcaagactaa tatttaattt gctatcgtcc
    36781 ccttcatgaa gttccgtatt aatccaaaag cctaatgcgt ctacttctgg taccaaatct
    36841 agcatcgttt tcaaaactaa tgctcctctg aaaaaagtcc cgtttgtgta tctcgtattc
    36901 ccagataacg tgttccagtt tactaacatt agcggcttat tgatatgatg atgtttcaag
    36961 aaagccttta attgaagcgt ttttgacaaa caataatcct ctgaaatcga aaacgacttc
    37021 atatcctctt tcgaaaaatc taccgcttca ttttgattcg cattataggc gacaaagtcc
    37081 attttatccg cttcttctaa aaaccacgta tgtcgttcag gcactgcatt tttagacaat
    37141 gaaaatggga caaaatttcc gacttggata gctggaaaac gcgattttat agtgtgatat
    37201 attttcaaat aaagtttttt cagttcttcc ttatcagcat atgtattttt cggttcaaaa
    37261 aacataaaat gccattttga aacaaattcc cgcccaaaaa cctgcataca atgctttaaa
    37321 aagtgatcca atcgttcaaa aacagccgcc tcatcgccta caatatcttg atactccaag
    37381 cgaataaaca attgtaaatt ttgctgtttt aaaaaagtga gcgctaaatc cgcattcgca
    37441 tatggagaag aagttggcac taattcgtcc gtttccgttt caggcaagaa cgtcgaacct
    37501 ctaaacaaat gacgaatacc aatataatta atcccaatct catcacgcgt cgtaataatc
    37561 tgcttttgga cattatcttt aagcacttct ttaagctcac caatcgtcaa aatattcata
    37621 ttctcactta aacaacgttc ggtcttttcc gtgatatcaa ttttcttttt ctcaaatggt
    37681 gctttattta attccttacc cggctccaca tcatgataaa gtcgtgacaa tttcactaaa
    37741 atttccggag atggcacaat ttgttctata ctagcgccca gctcagatgt cttattgtct
    37801 attaacaaat tcgtttccac atgatgttcc gctcggtatt cacttggcgt tagctcaaaa
    37861 tgaaacttaa atacttctga aaaatgcttt tggctcgaaa aaccattttt taacgcaatc
    37921 tctgtaatac tttccgccga atgtagtaaa tcttgaatcg catgcttcaa tcggacttct
    37981 gtcaaatact gtaaaaaacc aagccccgtc gtctttttaa aataacgtga taagtacgcc
    38041 tcacttaaaa actctttttg cgcaaactca cgaagcgaca aggcttcatc aaaccgctct
    38101 tccacttctc gaataatgcg cgaaatccgt ttatcattga cttctttcct agcagaagat
    38161 ggaattcctt ttttcaaaaa acgcgtaagt aataataaaa tttggaacaa cgccgattgc
    38221 gcttctaatt tattcgctcg tttcttcgtc gccgaagcaa tcaaaagctc actcaccgac
    38281 ttcctcaaag acccaacaac ccgctctctc cccgggtcac tctccttcga gaaaaattta
    38341 aaagaatgct gaaaataatc ctcataataa tgcgcaaaaa atgtatctga aatcgttaaa
    38401 ttaataaata aattatcttc atttccctca attgtataaa aggtattgcg atcaagaact
    38461 aaaacatcgc cttcctgcaa gtaaaatttt tgctcagaaa ccttgattgt tatttgtcca
    38521 gaaatagcaa ataccaattt agttccaagt gatatttccg acgtcagctg ctttatatgt
    38581 tgaataccaa tcgtataatc ttttaaatga gacactcgat tcaccccttc gtttaactta
    38641 atcggacact tttatattat catagtcgtg aaaattaatc gctatcagtt tttatgattg
    38701 ttttagtcat taaaccgaca caatcgagtc acatatatcc ggaatttttg tacttttgcg
    38761 agacaaaatg ataaataaaa cggcgtataa taaatgattg tagaaaacga ataaggagtg
    38821 cgccaaattg aaaacttcta aaataataat agcttcatta gttagtttaa ccctggtttc
    38881 aaacccaatt ttaacattcg cagcaacgaa tgatgtgatt gataatacaa cagaaatcac
    38941 tactgataaa gaaacaagcc caactcaacc aactattaaa aacacactca aagctggtca
    39001 aacacaaagt tttaacgact ggtttcctga tgacaatttt gcttcagagg tagcagcagc
    39061 atttgaaatg caagcaactg acactatcag cgaagaacaa cttgctactc taacaagcct
    39121 agattgccac aattcttcca tagccgatat gactggtatt gaaaaattaa ctggtttaac
    39181 aaaattaatt tgcacgtata ataacattac tactcttgat cttagccaaa acactaattt
    39241 aacttatctg gcatgtgatt caaataaact tacaaacctt gatgtaaccc cgcttacaaa
    39301 attaacctac ttaaattgcg acacgaacaa actcacaaag atagatgtaa gtcaaaatcc
    39361 attgttaact tatttaaact gcgcacgcaa caccttaacc gaaatagatg tcagccacaa
    39421 tacacaatta actgagctag actgccattt aaataaaaaa atcaccaaat tagatgtgac
    39481 accacaaact caattaacaa ccttagactg tagctttaat aaaataactg cattagatgt
    39541 aagtcaaaat aaattactga accgtctaaa ctgcgacact aataatataa ctaaactgga
    39601 cctcaaccaa aatattcagc taactttcct agattgctcc agtaacaaat taaccgaaat
    39661 agatgtaacc ccgcttacac agttaacata ttttgattgt agcgtaaatc ctttaactga
    39721 attagatgtg tctacgcttt caaaattaac tacactacac tgtatacaaa cagatttatt
    39781 agaaatagac ctaacacaca acacacaatt aatatatttt caagctgaag gatgtagaaa
    39841 aataaaagag cttgatgtca cgcataatac acaattatat ttattagact gccaagccgc
    39901 tggtataaca gaattggatc tttcacaaaa ccccaaatta gtctatttgt atttaaataa
    39961 tactgaacta acgaaattag acgtttctca taacacaaag ctgaaaagtt tgtcttgcgt
    40021 aaatgctcac atccaagact tctcttctgt aggtaaaatt cctgtcctta acaataactt
    40081 ggatgctgaa gggcaaacaa tcacgatgcc taaagaaact ttaacaaaca acagtttaac
    40141 cattgcagtt agtcctgatt tattagatca gtttggaaat ccgatgaata ttgaaccggg
    40201 agacggcggt gtatacgatc aagcaacaaa tacaataact tgggaaaatc tcagcacaga
    40261 caatccagcc gtaacctata ctttcacttc cgaaaacgga gctatagtag gaaccgtaac
    40321 aactccattt gaagcccctc aacccatcaa aggagaagac gtaacagttc attatcttga
    40381 tgacaaagga gaaaaattgg cggctgatga agttttaagc ggtaatttgg acgatcctta
    40441 tacttctagc gcgaaagaca tcccagatta tacattaacg actactccag ataacgccac
    40501 tggaacattc actactacta gccagtccgt aacgtacgtg tacactaaaa acatcgtagc
    40561 cgcagagcct gtaacagtga attacgtgga tgatactgga aaaacactcg ctccatccga
    40621 aacattaaac ggaaatgtag gcgacacata taacgccact gccaaacaaa tcgacggcta
    40681 tacattaaca actacaccaa ataacgcaac cggaacattc aacacaagta gccaaacagt
    40741 gacatatgtg tacactaaaa acatcgtagc cgcagagcct ataacagtga attacgtgaa
    40801 cgatactgga aaaacactcg ctccatccga aacattaaat ggaaatgtag gcgacacata
    40861 taacgctact gccaaacaaa tcgacggcta tacattatcc gccgaaccaa ccaatgcaac
    40921 tggacaattc acaagtagcg cgcaaaccgt caactatatt tacacaaaaa atccagcccc
    40981 tgaaaaagga gttgtagaaa ttcactatgt tgacgaaaat aataaacaac tgagctccgc
    41041 cactaaaatt tctggaacag taggagataa ttacacaact gagccaaaaa atatcgacgg
    41101 ctatacgcta acaactacac cagataacgc aaccggaaca ttcaacacaa gtagccaaac
    41161 agtgacatat gtgtatacta aaaatatcgt agcagcagag cctgtaacag tgaattacgt
    41221 ggatgctaat ggcaaaacgc tcgctccatc cgaaacccta aacggaacta ttggcgacac
    41281 atataaagca accaccaaac aaatcgacgg ctacacatta tccgccgaac caaccaatgc
    41341 gactggacaa ttcacaaata gcgcacaaac tgtcaactac atttacacga aaaacacaaa
    41401 catcgaccaa cctttaccag ataaaaaaac aacgaaaccg tctaatttaa agacaaccga
    41461 agtgaaaaaa gcttcagata ccctaccaaa aacaggcgat tccacaccat ggaaatcagc
    41521 tctacttggg gtcttcctat catccacagc tctagttatc tggaaaaaga aaaaatagta
    41581 aaaaagccgg ccaggattaa tttcccgacc ggctttttga tctcaatctt cttccacttg
    41641 gatagaaaca cccacatcca gtaattcctc aactgcatca atcacagaaa actccccata
    41701 attgtatact gcatcatcta caactaaaat cggcaaagct tccattccat tcttatcaat
    41761 caacatttga acccgctctg gcaagtccac tttcccgact tctcctagct gaatatcaaa
    41821 cacgatgcct gtataatcaa aatggatttt tcgctcatct tcactttgat tcataaacat
    41881 tttccatatc tctaggttaa tctcagactc attttccgca gaataaaagt aactaatttg
    41941 cttcatatta aaattattta ctttctaaat cgtggacaaa cagcccgctt aataattttg
    42001 gttcaaacca agtcgatttt ggcggcatga tttctgcggc atctgccaca ccaagtaaat
    42061 cgtccattgt cggcgggtac atcgcaaatg ccaccgaata acttccatta tccaccaaac
    42121 gagttagctc ttctaatcca cgtattccgc cgacaaaatc aatgcgattg tcgcgacgaa
    42181 tatcttcaat cccaaaaatt ggcgttaaaa cttgcgattg taatattgaa acatccagct
    42241 gaccaataac atcgtttgga atcacttcgc ttttcgccgt aagtttgtac caatttccat
    42301 ctaaatacat ccctacttgt tttggcttct ctggtttaaa tgcttctttt ccaaccttct
    42361 ccacgtcaaa actagcctct actttgctaa ggaaatccgc ttcaattggc acattcacaa
    42421 ccctattata atcaagaatt tctaattgct cttctgggaa aacaactgat aaaaagaaat
    42481 taaattctgc ttctggccca gcctctggga attcctctcg ccgtttcaaa ccaactttca
    42541 cagcagattc cgttctatgg tgaccgtctg cgatatatag cgctgggact tccgagaacg
    42601 ccgctgacag gtcttctaaa atatgtgcgt ccgtaattgc ccaaacctta tgcgcgaccc
    42661 cgtggaagct ctcaaagtca tattcaggct cattttcatt cacccaagac tcaacaagtg
    42721 cattaattgc ttcttttcca cgataagtaa ggaaaatcgg acttgtattt gcatcacaaa
    42781 catctacatg acgaatccgg tctaactctt tctcttcacg agttaactca tgttttttaa
    42841 ttttcccatt ggtataatca tcaatcgacg tacaaacaac cagccctgtt tgcgggcgac
    42901 catccatcgt cagttgataa atataaaatg ccgggtttgc ttctctacca agccaaccat
    42961 ccaactcaaa ttgttccaaa ttatccgctg ctttttgata aacagctggg tcgtaagggg
    43021 aaaccgccgg atctaaatca atttccgcct tatcaatatg taaaaaagaa tacttatttg
    43081 catcaccaag ttcgcgcgcc tcttccgaat taagtacatc atatggcaag gaagccacct
    43141 tttccgctaa atttttaatc ggacgaattg ctttaaatgg acgtatattt accattgtta
    43201 tcctcctttt tagtaaaaga gcatgaaccc gtctggcaat aaccataaag tttcatgctc
    43261 tcattatttc ccgggtaata attttaaacc gtaacaccta atggttcaat aactcgaaca
    43321 cgcaaaaccc cttgcacagc taataaatca cttttcagtt gttccaaatt agcttgcgtt
    43381 tccttatcaa tatcaattaa tgtgtaggca tattcatttt tactgcgatt tatcatatct
    43441 aaaatgttta acgaatattt ccctagctcc gtcgtaattt gtccgaccat attaggaatg
    43501 tttttgtgac aaattccaat tcgcggatgt ccattatacg gcatttccac gttcggaaaa
    43561 ttaaccgagt ttttaatact acctgtttca agatatgatt gcagttcttt cgcagccatt
    43621 ttagcacagt tggtttcggc ttcttccgtc gatgcaccta aatgaggaaa tacatgcact
    43681 tttttgtggt ttagtaattc ttttgtcgcg aaatctgtaa tatataaacg taaaagtcca
    43741 tcatctaaag cttctttcac agaggctgaa tccactaact caccacgaga aaagtttaat
    43801 aaaacagcat tatccttcac taattgtagt gtatctgcgt taaacatgcc acgtgtttta
    43861 tccgttaaag gcacatgaac tgttaaataa tcgcatgtgg ccaaaacttc ttctatcgtc
    43921 atcgcacgtt ccacttcttt agaaattctc caagccgtgt ctactgaaac gaatggatcg
    43981 tatccaacca catccatccc aagcgataaa gcgtcattgg ctaccaatgc accaattgcg
    44041 cctagaccga taatcccaag ttttttgcca gcaagttctg ttcccgcaaa ggctttcttc
    44101 ccagcttcga ctttctgctc gacatcatct tccgccggta attctttgac ccattccgtt
    44161 ccttccaaaa ttgggcgcgc cgaaacgaat aaactcgcaa gaactagttc tttcacagca
    44221 ttggcattcg cgccaggtgt attgaataca acaatacctt tttcagaaca attttctact
    44281 gggatattat taactcctgc accagctcgg gcaactgcct tcactgtctc cggaaagtca
    44341 aaatcgtgta agttgtaact ccgtagtaaa atcccgtctg ctggctgatt tgcatcaatc
    44401 acatattttt cgagatcaaa tgtctttaag ccttcttttg cgatagcatt aaacgtttgg
    44461 atattaaaca cgtacttctc ccccttttct tgcatttgca aatttttcca taaaggcgat
    44521 tagagcttcc accccttcaa ttggaaatgc attataaaga cttgctcgca taccgcccac
    44581 tgagcgatgt cctttcaagt ttttaaaacc atttgcttca gcttcttgaa caaaagcttt
    44641 atcaaactcc gctgaattcg tcacaaaagg aacattcgtg agcgatctag cagaaggttc
    44701 gaccggtgaa gaaaagaaat ccgattgatc aatataatta tataataagg ccgctttttt
    44761 gcgattcaac gcttcaattc cagcaacgcc accttgctcc ttaatccatt caaatactaa
    44821 ttttgctaca taaatggcaa atgtcggtgg tgtgttatac atggaatcat tctcggcttg
    44881 tactttaaaa tctaacatag aaggaagtcc ctctacttgc cctatcaagt cttcgcgcac
    44941 gatgacaagc gttaatccag caggcccaat gttcttttgc gctcctgcat aaattaagcc
    45001 aaattttttc acatcataaa cgctcgataa aatattggag gacatatccg caacgaccgg
    45061 gacagctgag tctggcacat caaacattgc tgttccttcg attgtattat ttgtagttac
    45121 atgtaagtaa gccgcgtcac tagaaactgt aggaatctca ggaatatagc tgaaattgcg
    45181 gtcttccgat gaggcaatta cttccacctc tacaccctga attttcttag cttcggaaat
    45241 tgctttcttc gcccaagatc cagtgtttac atacgctgct tttttgccat ttgcaagatt
    45301 cattggcacc atatcaaatt gcaaactcgc gccaccttgc aaaaatagta ctttgtaatt
    45361 ttctggaatc tccatcaatt ctcgaattaa gctctccgca tcgtctagga tgttttgaaa
    45421 taattctgaa cggtgactca gctccattac tgacattcct gaaccattgt aagagagtag
    45481 ctccctttga accttttcaa gtaccggtac tggtaaaact gccggacctg ccgaaaaatt
    45541 ataaacacgt tccactcaac atctctcctg tcttcaaatt tccccaatta cttacaaaaa
    45601 ttttcaccaa taatcgaata cttattggcc agatatgagc cttcctcgtt acacttatgc
    45661 ttttcgaagt tctgttgtta agaaataaaa aagccgaacc tgtgatattc tacacaatat
    45721 tcggattttt cagcgcttaa aagtaaacac tgccttttgt acttttgtat attatagcag
    45781 aaacagagct gtttttcaga aaatttatac taaatctaca aataaatgtg atgtttaaac
    45841 tttctgacat taaaaaagca cgagaaaccg ctatttaaag caattctcgc acttctactt
    45901 tttgaaaaac acttcacaaa agatgttagc tatttttcac ttttcgtcct aaagtaaacc
    45961 aatacacagc aaaaaataca acaagtgcaa taattgctgt gcgatacata atagcataat
    46021 tgtagtaagt cgcaacaata ctcaaaccaa aactaccaac agccattcca atgtccattc
    46081 ccgaaagaaa agtcccgttc gcggtacctt tattgtgcgg tgcagcccgg tccacagcca
    46141 gtgcttgaag cgccggttgc gacatcccgt aacctaaccc gaagaataac gatgcgataa
    46201 acaagctgat tgcaccagtt gcaaaagaaa gaattaatat cccaattatc atcgaaagcg
    46261 ctcctggaat aataacaaaa cggtgtccct tcgtatcata aagtcgccca gcaaacaaac
    46321 ggcttacaag aaccataatc gcttgcccga taaaatatat ccacgttgtc gaaatcccca
    46381 gttctgttcc atataccatc ataaatgtct ggatcccacc aagcggaata gccattaata
    46441 aacacaagcc cgccggaagc aaggccgttt tctcaaacaa tttcattttt tgatgtacaa
    46501 tcttttctga ttttggaatt ttcacctgtg tcatcaaaat taaaataaac accatcaaaa
    46561 caagcgaaaa cgtcactaaa acatcgaaag aaaaataatt cataattaaa atagcgataa
    46621 tcggcgcaag tgacattcca agtgcagtcg taagcccata aaaaccaata ccttctcccg
    46681 ttctgcttgg tggcacgagt ttagaaacgc ctgtagcaat agaagttgtt ccgatacccc
    46741 agccagcccc gtgaaaaagc cgtaatataa gtaaggccgc caccgccgtt gaccaataaa
    46801 agttcactgt agttaaaatt aaaatcaaaa agcccacgat aataagtact ttcggtccga
    46861 atttgtcatt ccaactccca gcaatcgccc gcattaatag tgctacgatg gagaatagcc
    46921 ccaccgccaa actcgcttcc atttgcgttc cacctagctc aataatgcga gccggcaacg
    46981 taggcataaa caccataaat ccaatatata aaagtacact gcctaacaat aaaaatacgt
    47041 agtccttcgt ccaaagtctt gtcttatttt ccaaaattta cccctcttta ctctatatta
    47101 gtagaaatgt tctttaaaat agccgtgaat tgttccaaat ctgcgcgaga aatcccagca
    47161 aacattcttt cacaactcgc ctccacgata tcgcggagtt cattcgtctc ttttctccct
    47221 ttgtccgtta aagataaaag tgaaatccgt ctatcttctg tactcacttc ccgcacaaca
    47281 agctctttcc taagtaaaac atcgacaatc cgattcacgg ttggcgtgtc ctttttcgtc
    47341 caaagagcaa tctctttttg cgaaatcggc tcgttcgcct caatcccctc taaaaccgac
    47401 cattgctctg gtgtcacatc ataacttgca atcgaacgca gcaaaaataa atgcattttc
    47461 ttcgctgtcg tatttacatc aaatgatatt tcatcataat atccgcgcat atttatcctc
    47521 atttctattg tcgtaacaat aattgtcata acaaccatta tacatactga ttactttttt
    47581 gacaagaaaa acagtcgaat aaacgactgt tcctacaata attccacatc tataatatct
    47641 ctaaattcga ttacatactc atacccaaca atatctttca aaataacttc ttccgttaac
    47701 atatctattt ctagcggcac taagtcctgt gtttcaatct ctccaagccc aagaaatgcg
    47761 gaaggatatt caaatggcgc taaacgcaga gaagatacat ctgcttcttg aaaatatttt
    47821 aaacgaacga cccattctcg ctttatagca tcttttaatg tgataaaaaa gctttcgcgc
    47881 tctaaataat ccacttctgg ccgactcgtt aaaaaagcag cattcttctc tgttcgcact
    47941 tgctctttct gaattgccgt aaccatcatt atcacctctt aactttatta tacgaacaaa
    48001 cgttcttaaa atcaagtaat ttgctaaaaa atttttttca taagagcctg aataggttta
    48061 gcgcttacat attctttttc cgacaaaaac acttgcaaat taatgaatag ttgctatact
    48121 tatgtaagta aataacatta acaaa
//
LOCUS       DASDYO010000005        38699 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.005, whole genome shotgun sequence.
ACCESSION   DASDYO010000005 DASDYO010000000
VERSION     DASDYO010000005.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 38699)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 38699)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..38699
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.005"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..631)
                     /locus_tag="U0290_000282"
     CDS             complement(<1..631)
                     /locus_tag="U0290_000282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrD-helicase domain-containing protein"
                     /protein_id="HEM2300350.1"
                     /translation="MGLNIPPKPESSLWTDDQWKAIQAEGNNVLVAAAAGSGKTAVLV
                     TRIIEKLINESANLNVDELLIVTFTNASAAEMKFRIGKGLEEALAQNPDSTHLKRQVA
                     LLNYASISTLHSFCLEIIRKYYFDADIDPNFRLIEPIESSMIRDEVLENLLEQEYSIE
                     NNEPFFHLVESFTGDRSDAELHALISKLYDFSRANPDPNIWLEEMVDFYN"
     gene            complement(633..4106)
                     /gene="addB"
                     /locus_tag="U0290_000283"
     CDS             complement(633..4106)
                     /gene="addB"
                     /locus_tag="U0290_000283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddB"
                     /protein_id="HEM2300351.1"
                     /translation="MTLQIIAGRSGTGKTTYLMDEVSVKIKQNSKTYIFIVPDQMTFQ
                     METSFLNKENLEGMLGTQIFSFSRLAWKILQETGGLSKTFLSQTGIEMVIRKAALDQR
                     DKLKIFSRATSRKGFYAELANLFKEMKQEEVSIEDMVKSATNLSTSVNNKIHDISIIY
                     QKYEELLADKFLENEDYLRLLAEKITESDYLNQTEIVIDGFTSFSQQELTVIGALMRK
                     CDKVTVSLALNVPEIKHGLDEYSMFKASTEAYYALLELAKLNGINVEEDKFFLENKRA
                     KTESLAFLANAWGHNKFMAFKEEPHNLSVHQANNRRAEIEGVAREIRQLTLNGYRYQD
                     MAILTRNLGDYDVLCETVMESYNIPIFIDKKRAMSKHPFIEFIRSSLDAILFNWKYEP
                     IFQAVKTEFFFGVAEKSSVLRRKADILENYVLENGIQNKWKWEKEGDWIYRKIRGLST
                     NVLPQTDEEIQTQSIINEMRSLIVNPLSTLELNLKKAKTGMEFALALYHFLEQVNAVE
                     RLESWRQRAEEQGYLELAREHEQAWSAISALLDEFVEVLGEETLDLNSFVEIIATGLD
                     ALEFSLLPPSLDQVVLSDMENAKLLDMKVIFAIGMNDGVMPLRQKDNGILSDQDRDAL
                     RAEVSNLKPSAKNNIGEEDLLAYKIISLPSDKLFLSYPAADEEGKVLSESNYLRKIKG
                     QFKKLSESVYLTDPGLLSDAEQSSYIRSKQATLGLLTSQLQMYKRGYPLSSVWWDAYN
                     SYFENGKESRMAKQVLSSLYYENKTKPLQEKTAKNLFGETIHASVSRMEKFFSCEFQH
                     FAQYGLKLEERGHFQLQAVDMGEIFHGAMEWISAELKRNNLDWGSLTDQECRQMAKLA
                     MTFLAPKIQHEILLSSKRMEYIQYKLLQIITRATTVLNEQAKSSAFRPVGLEVDFGLK
                     GDIPPLKISLQANSELLLQGRIDRIDMAEQEDRTFLRIIDYKSSSHDLALTEVYYGLA
                     LQMLTYLDIVVTNAQKMIGKTAEPAGVLYFHMHNQYVQAEKELSDEAIAKELQKNSKM
                     KGLILSDPVAVSLMDTTLEKGKSSNIVPAEIKQNGELSARSKTATREEFDKMRHFVRH
                     KYQEAGNKILDGAVSINPYKLKERTPCQFCGFRSFCGFDPSLASNQYRHLTNEKTETI
                     LAKMDIEGGGQ"
     gene            complement(4256..4612)
                     /locus_tag="U0290_000284"
     CDS             complement(4256..4612)
                     /locus_tag="U0290_000284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465793.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IDEAL domain-containing protein"
                     /protein_id="HEM2300352.1"
                     /translation="MVICKSLDFGKVVFSSCFLFFLSILQFFKIVINMSEGVVVVEMR
                     DFSNSLMNQVGVLKGEKELTNVFIECFLTMLLEERKLEQLRAEIDKALDNRNKAEFMK
                     LTEKMNKIQQEMLAFD"
     gene            4743..5351
                     /locus_tag="U0290_000285"
     CDS             4743..5351
                     /locus_tag="U0290_000285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014931629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComK"
                     /protein_id="HEM2300353.1"
                     /translation="MKKEQISTQFYEVNPHTMIIFPKKSGSIVYSEIYEVDSHYTSKF
                     TPFELIKTSCNFFGSSYEGRKEGTKHLIGVTHKPPIIIDPVTSTYVFPTVAPSSTECI
                     WIFPQHIKDYHAIGFNHTLITFSNMETFEIDMSLASFNNQIARTSMLHMKFSQKMRIM
                     ESNFPSMNRFFPPTTLAAEPRRYYSTMLPNNEDPNEPQDPEQ"
     gene            complement(5406..5753)
                     /locus_tag="U0290_000286"
     CDS             complement(5406..5753)
                     /locus_tag="U0290_000286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2300354.1"
                     /translation="MEFGEKLIHLRKKNRLTQKQLAAKIGTTASTISKYENDNHRPPI
                     FILAKLAEILGTTTDFLLDDVAGLREKNSVNAFPLIGNPELEKWYLELPYTYSEDELL
                     MLKRIADAIENKK"
     gene            complement(5859..7757)
                     /locus_tag="U0290_000287"
     CDS             complement(5859..7757)
                     /locus_tag="U0290_000287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2300355.1"
                     /translation="MRITDLLSKDVMIMSLQATTKEAAIDEMIASLKSNGKINDEVLF
                     KEAIMNREAQSSTGVGEGIAMPHAKTKAVNEPTVVFAKSEKGLDYDALDGQPAHLFFM
                     IAAPDGANATHLETLAALSRLLVHPAFVQSLRDAKTPEEVINLFNNEQEDAEETVVAP
                     TSTNETGKSVVAVTACPTGIAHTYMAAEKLQETANKLGVRIKVETNGSRGVENRLTDK
                     EIAEADGVIIAADVQVDMPRFDGKHLIAKPVAAGIHKPEELIKEAISGNAPIYKAEEG
                     SQATESADGLSIGQQIYKHLMSGVSHMLPFVIGGGIAIAIAFMLDQMLGVPQDQLAKL
                     GSYNEIPALLKQIGDVAFGFMLPVFAGYIAYSISDRPGLVAGFVAGGVASVGGAGFLG
                     ALVGGFLAGYAVELIKLALKKLPKTLDGIKVVLFYPVLSVLIVGLLMLLLNVPMSALN
                     TWLNDFLNSLSGTNAVILGLLLGAMMAADLGGPINKAAYIFATGTLAASVATGGSAIM
                     AATMAAGMVPPLATFVATLIFRNKFTAQERDAGLTNSILGASFITEGAIPFAAADPLR
                     MIPSFIAGSAITGAVVMFLNIKVLAPHGGVFVIFLVSQPWFYIIAIIIGTLISAGLIG
                     VLRKKPTV"
     gene            complement(7759..8682)
                     /gene="pfkB"
                     /locus_tag="U0290_000288"
     CDS             complement(7759..8682)
                     /gene="pfkB"
                     /locus_tag="U0290_000288"
                     /EC_number="2.7.1.56"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase"
                     /protein_id="HEM2300356.1"
                     /translation="MIYTITLNPSIDYIVQIDQLNLGGLNRMKQDYKLPGGKGINVSR
                     VLNQLNVPSLATGFLGGFTGNFIKDWLQNEGVKTGFVTVKDDTRINIKLKHGEETEIN
                     GLGPAISEKEINGFLKVMDKVTANDIVILSGSVPPSLGNDFYNKIIQICKEKKAEFMI
                     DTTGQELLDALPNHPILIKPNHHELADLFGVKLGSVEELIPYGKKCLELGAQHVIVSM
                     AGDGALLFTGEDVYFADALKGELKNSVGAGDSMIAGFVGTFDKTRDPVKAFAAGVATG
                     GATAFSTDLAQKELIDELLPQVKITKITGRN"
     gene            complement(8679..9431)
                     /locus_tag="U0290_000289"
     CDS             complement(8679..9431)
                     /locus_tag="U0290_000289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2300357.1"
                     /translation="MLNAERKQLIMESIEKLGVIKLQELVEGLATSESTIRRDLIELE
                     EQGLIQRVHGGAKLVKLHNQEPSMNEKSFKNIQSKKVIAVYCASLVEENDCIYLDAGS
                     TTLELITHLANRNITVVTNGLTHIEELVRQNIDAYLLGGKMKVHTKAIIGAVALDNIQ
                     NYHFDKAFIGTNAMHPEHGYTTPDMEEAFVKRAAKERADRVFVVADHTKFNEVNFSKM
                     FSIEEATIVTDYIPSAVKESFIQKTKIIEVEK"
     gene            9649..10974
                     /gene="pepC"
                     /locus_tag="U0290_000290"
     CDS             9649..10974
                     /gene="pepC"
                     /locus_tag="U0290_000290"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase C"
                     /protein_id="HEM2300358.1"
                     /translation="MHTELTFEQLESFSRKWRENPDKLVFQASIIKNGIKAATENPAS
                     KVSIQPVFSHEVATDKVSNQQQSGRCWMFAALNTFRHKLNGTLGLKDFELSQNYTNFW
                     DKLEKANYFLENIIETASEDEDSRLVSWLLDTPQQDGGQWDMLVSIIEKYGVVPKSAM
                     PETFQSSKSADLNHLLNERLRTDAVILRNAIAEKKDTADLKEEMLAEVYQLLVMTLGE
                     PPKVFDFEYRNKDNEFKQELQITPKDFYERYVDMDLKDYIPLINAPTKDKPFNQAFTV
                     EYLGNIVNGTPIKYLNVEMDVLKKAAADQIKDGETVWFGCDVGQLSERNTGIMDTDIF
                     LLNQTFGFKTAMTKAERLDYKHSMLTHAMVLTGVNIANGEVNRWKVENSWGEKIGNNG
                     YFVASDAWMDEFTFQVVVHKKYLSKELIESFNQKPIVLKPWDPMGSLAL"
     gene            complement(10971..11414)
                     /locus_tag="U0290_000291"
     CDS             complement(10971..11414)
                     /locus_tag="U0290_000291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF523 domain-containing protein"
                     /protein_id="HEM2300359.1"
                     /translation="MIAVSACLAGIACRYDGKDKEITKIKQMVERGEAIPFCPEVTGG
                     LPTPRNPAEIIGGDGKDVWLGHAKVIDNKGTDVTEEYKNGARLTLIKMQELGITQIIM
                     KEKSPSCGSCAIYDGTFSGKIKDGTGVAAALFQMNGIKIISEFAF"
     gene            complement(11495..12406)
                     /locus_tag="U0290_000292"
     CDS             complement(11495..12406)
                     /locus_tag="U0290_000292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pseudouridine-5'-phosphate glycosidase"
                     /protein_id="HEM2300360.1"
                     /translation="MKNYLSLSEEVKQAKAEGKAIVALESTIISHGMPYPQNVEMARD
                     VEQIIRDNGAVPATIALIDGKIKIGLSDEELELFAKSSNVAKVSRRDIGYLIATKQLG
                     ATTVAATMICAELAEIGIFVTGGIGGVHRGAETTMDVSADLEELAKTNVAVVCAGAKS
                     ILDLNLTMEYLETKGVPVIGYQTDVLPAFYTRSSDVELTLRADAPEVIAESLKAKWDL
                     QIKGGAVITNPIPEEFAMDEKVINDVIQTALKEAEENHIHGKDVTPFLLGKVKELTDG
                     KSLEANIELVKHNALIGTQIAVAYQNI"
     gene            complement(12403..13521)
                     /locus_tag="U0290_000293"
     CDS             complement(12403..13521)
                     /locus_tag="U0290_000293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2300361.1"
                     /translation="MENNKAKMNEKEEIIFNSIRKNPYISQQELADILDLSRPTVANL
                     ISGLIKKGRILGKAYILNEAKQIVCIGGANVDRKFYIKDKAQLATSNPVRSTQSAGGV
                     ARNVGENLGRLGKEVILLTACGTDSDWEAVKNASNTYMNLDYVTAFPSIATGSYTAVL
                     ENNGDLLVALADMDAYDHLTPDVLAKNEGLLSQASAIIADLNCPKETLEYLGSFAEIN
                     SIPLVLVPVSSPKMSHLPERLDHVTWLICNRDESETHLGMTIKNDEDWRLAAQKWLDL
                     GVKNVIVTNGSKGAVAANKGEGTIFEPAIVIENIVDVTGAGDAFCSAVIYAWLEGKAL
                     KEILRAGSVNAARTLESEYTVRQNLSTSQLQKDMEEFK"
     gene            complement(13654..14355)
                     /locus_tag="U0290_000294"
     CDS             complement(13654..14355)
                     /locus_tag="U0290_000294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEM2300362.1"
                     /translation="MRLDKLLSHTGFGSRKEVKPLLKSGAVVVNGTIQKDSKTQVNPD
                     KDQVTVHGTPVVYQEFVYFMLHKPQNVVSATEDNVSETVIDLLAQEDTLTDPFPVGRL
                     DKDTEGLLIITNDGTLAHNLLSPKKHIDKTYYAKIDGDVTLADVEAFAAGIELDDGYT
                     CKPARLEIITPNEINVTIQEGKFHQVKRMFAARGKKVSYLKRISMGNLQLDESLGLGE
                     YRPLTESELAILQNK"
     gene            complement(14429..15751)
                     /locus_tag="U0290_000295"
     CDS             complement(14429..15751)
                     /locus_tag="U0290_000295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEM2300363.1"
                     /translation="MTRKETIQFGAIIHGVGGTTDGWRHPDINPAASTDLDFYKTRAK
                     IAEQGLFSFVFIADGLFISEKSIPHFLNRFEPITILSALAESTENIGLVGTFSTSFTE
                     PFTLARQLSSLDHISGGRAGWNLVTSPQEGAARNHSKKNLPTHSDRYTIAAEHLKVVR
                     GLWSSWEEDAFTYNKETGEFFNPEKLHRLNHQGEYFQVEGPLNIGRSKQGEPVVFQAG
                     ASSTGRDFAAKNAEAIFTHSDSLEEAIEFYQDVKARAEKAGRNADEVRIFPGISPIVA
                     DTLEEAEAKYTEFASLIPIENAVTYLARYFDDYDLSQFDLDAPFPDLGDIGKNAFQST
                     TDRIKKEAKERHLTLRQVATEAATPKTPFIGTKEQVADLIDVWFQNDAADGFIIASDI
                     PGTFETFVEQVIPLLQSRGLYRNEYPATTLRGNLGLTIPQNKQVVETK"
     gene            complement(15748..16014)
                     /locus_tag="U0290_000296"
     CDS             complement(15748..16014)
                     /locus_tag="U0290_000296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutaredoxin family protein"
                     /protein_id="HEM2300364.1"
                     /translation="MANVVVWSKVGCHYCKDVKDYLTEQKIVFQDIDVTDHDYLREVL
                     QAKYGIRYVPVVEIGDIEKGTYQAVTEIGLEHLEKALFEKEEVK"
     gene            complement(16007..17002)
                     /locus_tag="U0290_000297"
     CDS             complement(16007..17002)
                     /locus_tag="U0290_000297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LLM class flavin-dependent oxidoreductase"
                     /protein_id="HEM2300365.1"
                     /translation="MTIRFSILDQSIINPGEKPSEALQNTVELAQLAEQLGYHRFWVA
                     EHHNSDEIAGAAPEVLLGYIAAKTSTIKLASGGIMLQHYSPYKVAEQFHVLENLAPGR
                     MSLGVGKAPGGFQPATDALQKDFVKPTRTFDAKLKELVDFVTHHSEVAIAAKPLPENK
                     PEIFLLGGSAASAKQAAKLGISFVFAYFINGEEAVLKEARELFEQYRINTKASFQLAP
                     IVVVAETKIAADRHIPERESIKVELADGRRVNVGSREQAESYVKDINQTYRFITQRIG
                     AITGTKQEVGAEIKRLSKEYNIQDFVVLTPVKSTEIKRYSYQLLSESIKEEVVHG"
     gene            complement(16999..17778)
                     /locus_tag="U0290_000298"
     CDS             complement(16999..17778)
                     /locus_tag="U0290_000298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM2300366.1"
                     /translation="MITIKNIQKSFGENKVLKGIDLTVKKGEVVTILGPSGSGKTTFL
                     RCLNLLERPENGEISMHDQIINCKKPSKKEVLQLRKNTAMVFQQYNLFSHKTVIQNVM
                     EGLTVARKMPKKIAREIAERELTKVGLADKFSAYPSQLSGGQKQRVGIARALAINPDV
                     ILFDEPTAALDPELVGEVLEVMLEIARAGATMIVVTHEMEFAKRVADQVVFMDGGLIV
                     EQGTPDEVFNHTKEERTKRFLHRVSADYLYEIKEVKKERVI"
     gene            complement(17775..18482)
                     /locus_tag="U0290_000299"
     CDS             complement(17775..18482)
                     /locus_tag="U0290_000299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM2300367.1"
                     /translation="MPLDVPFIGTAVMAMLKTIPLTLAMTFFPILFGFIIAIGMTLIR
                     MYHVRFLEPIAKFYVSFFRSTPAILHIMLIYLGIPLLVDFLSKSFGLGISANKIPVVI
                     FVIIALSFTAGAYLTEILRSGIIAVDIGQMEAAYSVGYTHGQAIRKVLLPQAFMIALP
                     NFTNLCIGFLHTTSIAAIVAVPEITGMATIVASDNYAFLEAFIGAALIYWFLTILIEA
                     INYILEKNIAKYRGGTV"
     gene            complement(18496..19212)
                     /locus_tag="U0290_000300"
     CDS             complement(18496..19212)
                     /locus_tag="U0290_000300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM2300368.1"
                     /translation="MDKAFDVKMIADFIPTLAGYLPITLYILALSLIFGFILGVLLSL
                     PRIYKIPVLDQLARVYISFFRGTPIMVQLFIVFYGIPALSSIVGIDLSQMDPLYAAIA
                     TYALSSAATIAEVIRAGVNSVDAGQAEAAYSIGLSSRQTFLRIILPQALYQALPNFGN
                     LVIGYLKDTSLAFSIGVMDMSGRGQTLITLSNHALEVYISLSIIYYLTAVLLEYSFKW
                     IEKRVKKENTRFTSIFDIEL"
     gene            complement(19234..20043)
                     /locus_tag="U0290_000301"
     CDS             complement(19234..20043)
                     /locus_tag="U0290_000301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2300369.1"
                     /translation="MKKKYGILALALTAALTLSACGGKEEPEAANQKVQTITVGTGTQ
                     FPNVCFLDENGKLTGYDVELVKEIDKRLPGYKFKFKTMDFSNLLVSLGAGKVDIVAHQ
                     MEKSKEREKKFLFNDVAYNNFPLQLTVLDSNNSINSTKDLAGKRVITSATSNGALVLK
                     KINEEQGNNFEIAYEGQGSNDTANQLKTGRADATISTPFAVDFQNKTSAIKEKVVGDV
                     LSNAKVYFMLGKDETKLSKDVDEALQSIIDDGTLKKLSEKWLGADYSKEQY"
     gene            complement(20060..20596)
                     /locus_tag="U0290_000302"
     CDS             complement(20060..20596)
                     /locus_tag="U0290_000302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2300370.1"
                     /translation="MTEDIFRVATVDDAPEFLELLSSAFQSVKELGIDWPSTNADLAM
                     VTENIVNSSAFVLERNGKLISTITVRFPWESSSPPSKYPFVWWFATAPELAGQGIGDK
                     LLTYVEERVLRDTLKAPALTLGTSARKHPWLLDMYLRRGYEVYFEHEEDGDVGVMMRK
                     ILIPEKFDATLLGIPSWT"
     gene            complement(20612..21157)
                     /gene="ssuE"
                     /locus_tag="U0290_000303"
     CDS             complement(20612..21157)
                     /gene="ssuE"
                     /locus_tag="U0290_000303"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent FMN reductase"
                     /protein_id="HEM2300371.1"
                     /translation="MGKVTIIAGGIKTESRLTGLTQLAANELVTNGLEVNIIEVHKIN
                     AEALVTADFAHSDIQLANSEIESSSGVIIATPIFKAAYSGVLKAYLDLLPLKALKGKV
                     VLPLGLGGSNGHLLALQYALDPVLKELGAETILKGQFTVDKQIERFGDGLYEIESSAK
                     ERLDIALNQFISLLNQQSVEV"
     gene            21400..22299
                     /locus_tag="U0290_000304"
     CDS             21400..22299
                     /locus_tag="U0290_000304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2300372.1"
                     /translation="MEFRTIKTFYTVVNTGSFQRAAEVLNYSQPTISMRIKQLEQDLD
                     VQLFERGKTLKLTHAGRLFYERAGQLIAQYEVLDHTIFDLKNGNAGLIKVGISEPSAS
                     LVFPKILKTFLADFPKLMVNVSVDDANTCSQKLIDGEIDFAICGEPELILENFYFPFF
                     HDSLDLIVSESHPLASRTSVELRDLRDECFIFTPANCPIRIQIEQHLKRAIGSDYKKM
                     ELTSSMSHKYFVRENVGVSIFTSTAHSELLDGTVRIPIENLPISPPIGLLTNQKEKDF
                     DSTTKELIDRIIYYFDDKKRQLG"
     gene            complement(22325..24277)
                     /locus_tag="U0290_000305"
     CDS             complement(22325..24277)
                     /locus_tag="U0290_000305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium:proton antiporter"
                     /protein_id="HEM2300373.1"
                     /translation="MEIFELILLMLSAVFLSNVLSRFLPGIAVPLIQVILGIILAIPL
                     GDHTMDLNPELFLLLFMAPILFNDGASTDKKSLWKNRKAILSLSIGLVFVTVGVLGAF
                     IHYLIPAIPFAAAFALAAALAPTDAVAVGALAEKVRVPHKIMHILEGESLINDASGLV
                     SFQFAVLALVTGTFSFMSAGTSFLLLSLGGIALGAALSLLKIMLMRGLRQLGIENMTS
                     FMLMEILLPFLIFMVAEKVGVNGILAVVSGGMVHSFSYKGLNPEIAQLNLLSKNTWSV
                     IIFSLNGLVFILLGTQLPQILMTIWQDANIQKGMLFVYILGITFLLLGLRFLWILFFR
                     NYEENPKVDLVSRLKNTFLYTVAGVRGTITLVSALSLPFVLGNGNAFPERDLLIFIAA
                     GVIITTLLLANFTLPLFADKKDKIAADHTTDIVLLRDIVQQLQAYKTDENTVEMNKVL
                     NMYNNRIFSLMEHKEVNATEKELRRLTQEWQLENTRRLVFERKIDTGVGLSHMMRLGK
                     RLYVQTRAEKYRARMRYRQLLSHRFRDFRFVPLTFEERRKEIAKLQNENNLFVIQKLQ
                     ELDSNEYNPEIISLYLMNFERALGRGKNKKESNDEALQTTIDLASQIERETIQHYFEK
                     GTITRKEMKVYRDNLLAIEANMQLEF"
     gene            complement(24401..25999)
                     /locus_tag="U0290_000306"
     CDS             complement(24401..25999)
                     /locus_tag="U0290_000306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEM2300374.1"
                     /translation="MKLWKNATFYQMTAEGDQVSAVLTENGHIYAVGEARELEKQHAA
                     NITETIDLEEKVVFPGFVDAHIHLLWYGQALERLNLNQTTTKKEALALIAERTKQLAS
                     DEWLFVEGYDENKWSDEQTLISLADLDEVSQTNPILVRRIDYHSVSINSALQAHIADF
                     SENGFDGGGEIVRDKAGNFTGILRDNATTMAIDSFPAATPSELSAWLKIAITDLWSKG
                     ITGAHSEDLHYFTGFTSTLAAFRNTIGANKMPFRAHLLVHHAELAAFSASNESFVSGD
                     AFLELGAMKIFYDGTVGSRTALMSAGYADNSDEKGLQIHSDQAFEDLVKAARKAGLPV
                     AIHILGDQAFANVIRTLRANPPREGQYDRLIHTPWLTEALIEEAAGLPVLFDIQPQFM
                     TSDLPWALEVLGENHPPLAFAWKTLLQAGFPLAGGSDAPIEVPNPFWGIHAAVTRTAN
                     ADLDGVEYWPEQALTVFEAIQLYTKGAAFAGYKTTTRGQIAPGFVADFTILAEDPFQM
                     KQADLRQVSAMMTVVDEQIVYQKK"
     gene            complement(26003..27244)
                     /locus_tag="U0290_000307"
     CDS             complement(26003..27244)
                     /locus_tag="U0290_000307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2300375.1"
                     /translation="MTKWLPKDLWIVIIGMVLLYTGLSFIWPFNMIYMTQELGMSTTD
                     ASLVLLINSGVGIVSSIIGGLIFDRFSGFISLTIGTIILVLSTASLCFFHGFPFFIWN
                     LWAVGIAMGMVFSGLYAAAGLTHPTGGRTGFNAIYVAQNIGVAIGPLLAGLLAKQGMS
                     HVYIGSFVFAIAFAGYFFFFFHKIDWKSERVSAETKHRKKGAKLEFPTKLALCSFILL
                     LLTYLLCQLPHVQWQSNLSTYMTEIKGVTSSEYGNLWSLNGALIVLGQLILIPVVNRF
                     KKYLLAQIYIGIFLFILSFVVAMNASVYSGFVLGMIFLTLGEMFAWPAIPTIAYQLAP
                     KGAAGLYQGLVNGMATAARMLAPFLGAIVVQNLGGIKALFIGAFILLGCALISITLQQ
                     ILQKKDQQDKAALKISVNQGE"
     gene            complement(27445..28056)
                     /locus_tag="U0290_000308"
     CDS             complement(27445..28056)
                     /locus_tag="U0290_000308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300376.1"
                     /translation="MEERFTTELMFTLTNNPRFQEVAELVYWNEEEIVHCPENNEYVY
                     AIDEGNVTQCAARNSSWGKGSILGFTREETKIHPLSKTVAWKIPLTYVKDILKSMGKI
                     KVADLTMIEKNFLDRNEIDCIQWFIQEMPLRLHTTSWKVALDFFRQEIMQVVPKEICA
                     FQVKELKQQHILYELGYYLEIDVLQFHNYLRDLAYKKVLQKIN"
     gene            complement(28246..28776)
                     /locus_tag="U0290_000309"
     CDS             complement(28246..28776)
                     /locus_tag="U0290_000309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HEM2300377.1"
                     /translation="MRKLYTYFVLILGVAMIGLGIYLMFNPSTSLQALTIFIGIILVL
                     NGINEVISYFGEQKYWSISKWIMFDGILSILIGGFAIFESNMAERVFIIIFAIWILAS
                     AILRILTAFAVKGLPGWTVLLIMGIIGLIIAVISLFTNMLVAIAVGIILGIFFIFQGI
                     TCLSLWWVIRKGESRK"
     gene            complement(28792..29523)
                     /locus_tag="U0290_000310"
     CDS             complement(28792..29523)
                     /locus_tag="U0290_000310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEM2300378.1"
                     /translation="MKLIRTKTYEEMSQEALEVVKQVINENDNPVINTTTGASFDGMF
                     EGLVKGINAGEIPIEKVFLMNLDEYVAKRDASFTVYTYMHQKFYDLINKMPKRVELLD
                     GSLADFTDEIARYKKILAENERDLQILGLGVNGHLGANEPGTPFDARLFLADSDESTI
                     KSTIMYNNLKEDEAPSQMLTLGLADMMDAKQILVTASGERKAEAVKGLLEGPIDESCP
                     ASILRNHPNVVFIIDEAAGSLLTNH"
     gene            complement(29567..30412)
                     /locus_tag="U0290_000311"
     CDS             complement(29567..30412)
                     /locus_tag="U0290_000311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2300379.1"
                     /translation="MTKKIVFVDVDGTLVTDDGLVPASAKTAIIKARNNGHQVYLCTG
                     RSKPELYDSILSIGFDGIIGAGGGYIEVDDEIVYHKKVANEDVVHMVDFFHEKNLDFY
                     LESNGGLFASENLEAHLDSLVYGDVENDPIAREKKANNPHPFMTSLTYGETNLYRTDV
                     NKACFLENKNVPFEEIKNEFSGKFEVLHCTVPIFGDDSGELMVPDIHKATAIEFLLAH
                     IGAEKNTTIGIGDGMNDAEMLTYCETGIAMGNAKEELKLLADEVTKSVEEDGLYASFL
                     KHGLL"
     gene            complement(30532..33315)
                     /locus_tag="U0290_000312"
     CDS             complement(30532..33315)
                     /locus_tag="U0290_000312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HEM2300380.1"
                     /translation="MDMVKNEWKKLFKNKILLLSFVVILFIPLLYASFFLKSVWDPYG
                     KTGDLPVAVVNNDKPVDYNGQTMDVGDQLVTKLKSNKELDWNFLSKEDAEQGLKDGKY
                     YMIVTIPKDFSKNAASVLDKDPKKMELSYKTNGSLNYLGQVVSEQGAKQLKSEVSAEV
                     TKSYAEAIFDKIKESGEGFAQAADGSGKIKDGLVKSQEGNKTISTNLKTLADSSLTFK
                     DGANTLEVGLKTYTDGVNTAAAGGDKLNDGVSTLAAGVGPLKDGVAALDGGATKLASG
                     VSTYTSGVDTLAGGINQAYTGSTALSDGLNKMNGSVPTLASGITQLNNGQKSLATGLD
                     SLVDGSNKLSAGLKELDGNLTDKQGKIAQLKQGMNDLQQGIDQLNKSVNGEDAALAKQ
                     LAALQKSLSDLQNGLTFIKSNANFDAEAIKSKINATAGVSAEDKQKIIDAIQADLDKE
                     TQKSATQVATVEQLQSGLSGLDLAAIQTQVTELQTGVAKISAGYQAVHGGTNEAFNSI
                     HQAINGSGSQTLLGGANQLTAGLKSAQAGNAKLVAGTNQLNNQVPTLTSGVGQLAAGS
                     ANMENGLSQLNDGGNQLASNSGALRSGATELQGGTNQLAAKVPTLAGGVNQLQAGSSQ
                     LVGGLNQLSANSPKLVSGVGQLADGSSKIADGSSKLANGSFQLGDGLTKLTDGSTELT
                     DKLADGAQQVKDTKATDKTFNMIAAPTKLAHNEYTHVSNYGHALAPYVLSLALYVGAL
                     VFNFIMPIRRVSMEGQPAYKWWLSKLSLGFVAAVAMALLEGGIMIALGLRPDNIVEFF
                     GTAIITALAYMFLIMLLAMTFDNPGRFIAMVLLIVQLAGSGGTFPMPLTGWFFNLIHP
                     FLPMTYSIYAFRESLAAGMGPNVYSMSMLVLTIIMIACVGLLYLSMSHLKKRHDAHES
                     ALDDNQKLMALEN"
     gene            complement(33349..33819)
                     /locus_tag="U0290_000313"
     CDS             complement(33349..33819)
                     /locus_tag="U0290_000313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM2300381.1"
                     /translation="MKLSKSMDQVFCIMTMLYTQKVDVPISSVTIHHRLRDSSPSYIS
                     KILRKLVVSGLINSVSGNNGGFTLAKDPEEINLLDIVEAVEGKIDTYPDSDLIHTVFS
                     DYHEFAESGIHTITSAFRNADKEYANYLYSQKLSVLVEQVIGKERTTIIDWNEA"
     gene            34212..35735
                     /gene="gadC"
                     /locus_tag="U0290_000314"
     CDS             34212..35735
                     /gene="gadC"
                     /locus_tag="U0290_000314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate:gamma-aminobutyrate antiporter"
                     /protein_id="HEM2300382.1"
                     /translation="MSKQAKSLTLFGFFAITASMVMTVYEYPTFATSGFHLVFFLLLG
                     GFLWFLPVALCAAEMATVDGWQEGGIFSWVGNTLGERFGFAAIFFQWFQITVGFVTMI
                     YFILGALSYVFDFPALESNPFIKFIGVLIIFWGLTFSQLGGTKNTAKIAKFGFIIGIL
                     IPAIILFILGIAYVAGGNPLHVAFSKEAFIPDFSKASTLVIFVSFILAYMGVEASASH
                     VNEMTNPKRDYPLAMIMLVILAIALNTIGGLTISAVLPLKDLSLSSGVVQTFQALILH
                     FGSGLGWAVKLIAIMIALGVMGEVSAWVVGPSRGMYTAAEQGLLPEKMKKVNKHGVPV
                     PLIMVQGVVVTIWAAILTFGGGGNNLSFLTAISLTVVIYLVGYLLFFIGYLVLIFKKS
                     SLKRTYQIPGGKIVKVIVALIGLVTSVFALCISFVPPASIAAKSDTTYMVILSISFIV
                     TVLIPFIIYAVHDKKDISPKDITHLESSDINKFTHPRARGEHIINPDEKHIMNQDKL"
     gene            35748..37142
                     /locus_tag="U0290_000315"
     CDS             35748..37142
                     /locus_tag="U0290_000315"
                     /EC_number="4.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HEM2300383.1"
                     /translation="MLYSKENKESYLEPVFGSSAEDRDIPKYTLGKEPLEPRIAYRLV
                     KDELLDEGSARQNLATFCQTYMEDEATKLMSETLEKNAIDKSEYPRTAELENRCVNII
                     ADLWHAPKNQKFMGTSTIGSSEACMLGGMAMKFAWRKRAEKLGLDIYAQKPNLVISSG
                     YQVCWEKFCVYWDIDMRVVPMDKDHMQLNTDQVLDYVDEYTIGVVGILGITYTGRYDD
                     IYALNEKLEEYNSKTDYKVYIHVDAASGGFFTPFVEPDIIWDFRLKNVISINTSGHKY
                     GLVYPGIGWVLWKDESYLPEELIFKVSYLGGEMPTMQINFSRSASHIIGQYYNFLRYG
                     FEGYRTIHQKTSDVAQYLAHAVEQTGYFDIYNDGSHLPIVCYKLKDDANVKWTLYDLA
                     DRLQMRGWQVPAYPLPKNLENIIIQRYVCRADLGFNMAEEFIQDFQASIQELNNAHIL
                     FHDTQQSGVHGFTH"
     gene            complement(37151..38665)
                     /locus_tag="U0290_000316"
     CDS             complement(37151..38665)
                     /locus_tag="U0290_000316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2300384.1"
                     /translation="MLTNYIEKDIKRKCLICDFLLKNKHTNLDEIAEYMETSRVTVRS
                     DIHALNEELDGLIVIQMKECVDNWVYQCRLQNGATERKVLYKLYDNSMFLKCVAFFVT
                     NVEERKFTDFMDTYFISHSHAYRLKHKVEAFLREIDLTLDNNRITGKEYRVRYLIALL
                     QAEYGVLIYPLLDEEKQMIDDFMATLNLRINIDTLAHNAEGHAYFRSLISMAFKRDIP
                     TSAIILDEQCQKYIESSSFLAMVRKSSKETLEKELGQEFSYNDYLYLMLIYYSTNFSI
                     IDASMKKVELEQFNELIMKNADLQVLIDLFEEYFGPEVVNHSLFRAALCYFLKKTLFN
                     LQGLIPSNERLLDKKYEPLYMVVKNVLERWNEASEYRVLLIDSHINYLTIHLYPLIYK
                     WNNPVQICIFSFNLINFESCKFQVEQELGRKVTVHETMFNSVEELNQVLTESSEPTIV
                     LCHPNCEMELKEAVDGMIIPISLAFFDRDLVDVERAIQSLRIKEHEKRLAYLRG"
BASE COUNT        11311 a         8232 c         6552 g        12604 t
ORIGIN      
        1 tattataaaa gtccaccatt tcttctaacc atatattcgg atctggattt gctcttgaga
       61 aatcatatag cttagatatt aacgcgtgaa gctcagcatc cgacctatct ccagtaaaag
      121 actctaccaa gtgaaaaaac ggctcattgt tttcaatact gtattcttgt tcaagcaaat
      181 tttctagaac ctcatcacga atcatactac tttcgattgg ctcaattaag cgaaaatttg
      241 gatcaatatc tgcatcaaaa taatattttc taataatttc taagcaaaaa gagtggagag
      301 tggaaataga agcatagtta agtaaagcca cttgcctttt taaatgggta gaatctggat
      361 tttgagctag agcttcttcc aagcctttcc caattctaaa cttcatttca gcagcagatg
      421 cattagtaaa agttacgatt agcaactcgt caacatttaa gttcgctgac tcatttatta
      481 acttctcaat aattctggtt actaatacag ctgtcttccc tgaaccagca gcagcagcta
      541 caagcacatt gttcccttca gcttggatag ctttccactg gtcatctgtc cataaagaac
      601 tttctggttt tggcggtata tttaatccca tgctactgtc cccccccttc gatatccatt
      661 tttgctaaaa ttgtttctgt tttttcattg gttaaatgtc tatattgatt gcttgctaga
      721 gatggatcaa atccacaaaa tgaacgaaaa ccacaaaatt ggcaaggtgt tctttctttt
      781 agtttatatg ggttaatgga aactgctcca tcaagtattt tgttcccagc ttcttggtat
      841 ttatgacgta caaagtgacg cattttatca aattcttctc ttgtcgcagt ttttgacctc
      901 gcacttaatt caccattttg ttttatttct gctggaacaa tattagatga tttacctttt
      961 tcaagtgtcg tatccatcaa tgatacagcc acaggatcag ataaaattaa tcctttcatt
     1021 ttagaatttt tttgtaattc ttttgcgata gcctcatcac ttaactcttt ctccgcttgt
     1081 acatattgat tatgcatatg gaaatatagt actccagctg gttctgccgt tttgccaatc
     1141 attttttgtg catttgtaac tacaatatcc aaatacgtca gcatttgaag cgctaagcca
     1201 taataaactt ccgtaagagc caaatcatgt gaactcgatt tataatctat aatgcgtagg
     1261 aatgtccgat cttcttgttc tgccatatca atcctatcaa ttcgaccttg taaaagaagt
     1321 tcactattcg cttggagcga aatttttaat ggcggaatgt ctccttttaa gccaaaatca
     1381 acttctaagc cgactggacg aaatgcacta ctttttgctt gttcatttag tactgtcgtt
     1441 gccctcgtta tgatttgaag caatttatac tgaatatatt ccattctttt ggagctaagt
     1501 agtatctcat gctgaatttt aggcgctagg aaagtcattg ctaatttcgc catttgtcta
     1561 cattcttggt ctgttaaact gccccaatcc agattatttc tttttaattc tgctgaaatc
     1621 cattccattg ctccatggaa aatttcaccc atatctacag cttgtagctg aaaatgacct
     1681 cgttcttcta attttaaacc atattgagca aaatgttgaa attcgcaact gaaaaatttc
     1741 tccattctcg agacactcgc atggattgtt tctccaaata agtttttggc agttttttct
     1801 tgtagtggtt ttgttttatt ttcgtaatac aaactagata acacttgttt agccattcta
     1861 gattcttttc cattttcaaa ataactatta taggcatccc accatacact agatagtgga
     1921 taacctcgtt tgtacatttg taattgactc gtcaacaaac ctaatgttgc ttgcttagaa
     1981 cgaatataac tactttgttc cgcatcactt aataaacctg ggtctgttaa ataaaccgat
     2041 tcgcttaatt ttttaaattg gccttttatt ttccttaaat aattggattc acttagcact
     2101 ttaccttctt catccgcagc agggtaacta agaaatagtt tatcactagg caaacttatt
     2161 attttatacg ccaataaatc ttcttctcca atattatttt tagcagatgg cttcaaatta
     2221 ctaacctcag cacgcaaggc atccctatct tgatccgaaa gaatcccgtt atccttttgg
     2281 cgaagcggca taacaccatc gttcattcca attgcaaaaa tcactttcat atctagtaat
     2341 ttcgcattct ccatatcaga taaaactact tgatctaagg aaggtggcaa aagtgaaaat
     2401 tcaagggcat ctagcccagt ggcaataatt tctacaaaac tatttaagtc taaagtttct
     2461 tcacctaaaa cttctacaaa ttcatccaaa agcgccgaaa tagcgctcca tgcttgctcg
     2521 tgctcacgtg caagttctag ataaccctgc tcctctgctc tttgtctcca tgattccaat
     2581 cgttctacag catttacttg ttctaaaaaa tgataaagag ctaaagcaaa ttccatccct
     2641 gtttttgctt tctttagatt taactctaaa gttgaaagtg ggtttactat aagacttctc
     2701 atttcgttaa taattgattg cgtttgaatt tcttcatctg tttgaggtaa cacattagtt
     2761 gatagcccac gaatcttccg ataaatccaa tcgccttctt tttcccattt ccatttattt
     2821 tgaatgccat tttctaatac atagttctct agaatatccg ctttacgtct aagaacactt
     2881 gatttttcgg caacaccaaa gaaaaactct gtcttaactg cttgaaagat tggttcatac
     2941 ttccaattaa acaaaatagc atctaagcta gaacggataa actcaataaa tgggtgtttc
     3001 gacatagctc tttttttatc aataaagatg ggaatattat atgactccat cactgtttca
     3061 cataaaacgt cataatctcc gagatttctt gtcaaaatag ccatatcttg atatctgtat
     3121 ccatttaatg tgagttgacg aatttcacga gcaacccctt ctatttcagc acgtctgttg
     3181 ttcgcttgat gaacacttaa gttatgaggt tcttctttaa aagccataaa tttattgtga
     3241 ccccaagcat ttgctaaaaa tgctaatgat tctgtttttg cccgtttatt ctctaagaaa
     3301 aacttatctt cttctacatt aataccattt aattttgcca gctctaataa agcatagtaa
     3361 gcctccgtac ttgctttaaa catgctgtat tcatctaatc catgcttgat ttcgggcaca
     3421 tttaaagcta aagaaactgt tactttatca cattttcgca ttaatgcacc aatgactgtc
     3481 agctcttgtt gcgagaaaga agtaaagcca tcaatgacta tttccgtctg atttaaataa
     3541 tcactttctg taattttttc cgcaagtaat ctcaagtaat cttcattttc gaggaattta
     3601 tctgccaata attcttcata cttttgatag attattgata tatcgtggat tttattgttc
     3661 acacttgtag acaggttagt agcgcttttc accatatctt ctatagaaac ttcttcttgt
     3721 ttcatttctt taaataaatt cgctaactct gcatagaaac cttttctaga cgtagctcta
     3781 gaaaagattt ttagtttgtc tctttgatcg agtgcagctt ttctaataac catttcgatt
     3841 ccagtttgac tcagaaaagt tttagataac ccacccgttt cttgaagtat tttccatgct
     3901 aaacgactaa aactaaatat ttgagtcccg agcattcctt ctaaattttc tttgtttaaa
     3961 aagcttgtct ccatttgaaa cgtcatttga tccggaacaa taaagatgta tgtcttagaa
     4021 ttttgtttaa tttttacgct aacttcgtcc attaaataag ttgttttacc tgtgcctgat
     4081 ctacctgcaa ttatttgaag tgtcataccc tcaccaccga acatatgttt ttatttagtt
     4141 taccatattt gagcaatctg tccagaactt ttttcgaagc attttttgct tgaaaattta
     4201 taaaacagct caaaaaaact aagatagctc ttactatctt agtttttcat atattctagt
     4261 caaaagctag catttcctgt tgaattttat tcattttttc tgtaagtttc ataaattccg
     4321 ctttgttcct attatcgaga gctttatcaa tttcagctct aagttgttct aattttctct
     4381 cttctaggag catcgtcagg aagcattcga taaaaacgtt tgttaattct ttttcaccct
     4441 taaggacacc cacctgattc atcaacgaat tagaaaaatc acgcatttcc acgactacca
     4501 ctccttcact catatttatt acaattttga aaaattgtaa tatactaaga aaaaacagaa
     4561 aacagcttga aaatacaact ttaccaaaat ctaatgactt gcaaattacc atgtgctata
     4621 atgacaaaaa ataactcata actaactttg atgcttagtc gttacttaga agttttgctt
     4681 attaggcaat aactctaggt ttcttcttag acataaatac aaacatagag gagttgaatg
     4741 aaatgaaaaa agaacaaatc agtactcagt tttatgaagt aaacccgcac acaatgatta
     4801 tttttccaaa aaaatctgga agtatagtct attcagaaat ttatgaagtt gattcccatt
     4861 atacttctaa atttaccccg tttgaactaa ttaaaaccag ctgtaacttt ttcggatcaa
     4921 gctatgaggg acgcaaagag ggaactaaac acttaattgg tgttacccat aagccaccca
     4981 ttatcattga cccagtcact tctacttatg tatttccaac tgtagcacct agttcaacag
     5041 aatgtatttg gattttccca caacatatta aagattatca tgcaattgga tttaaccaca
     5101 ctttaataac attttctaat atggaaacct ttgagattga tatgtcttta gcatctttta
     5161 ataatcagat tgctagaacc tccatgttac atatgaaatt ttctcaaaaa atgcgtataa
     5221 tggagagtaa ttttccttca atgaataggt ttttcccacc aaccactctt gctgctgaac
     5281 ctagacgtta ttacagcacc atgcttccaa ataacgaaga tcctaatgag cctcaagatc
     5341 ctgagcagta actttaaaac caaataaaag ccagttacat aatagtagct ggcttctcct
     5401 taaaattatt ttttattttc aatcgcatct gcaattcgtt ttaacattaa taactcatcc
     5461 tctgagtatg tataaggtaa ttctaaatac catttctcga gttcaggatt tccaattaaa
     5521 ggaaaggcgt ttaccgaatt cttttctcgc aaaccagcta catcatctaa taaaaaatcg
     5581 gttgttgttc caagaatttc tgctaattta gccaaaataa aaattggcgg tcggtggtta
     5641 tcattttcat acttgcttat tgtggatgca gttgtcccga ttttcgcagc cagttgtttt
     5701 tgtgttaacc tatttttctt tcttaaatga attaattttt ctccaaattc caatacgccc
     5761 acctcacttc acttccagta tagcaatttt tcggaaataa ttcgagaaat tactaaaaag
     5821 aaatcgcctt tttagtttca aaagacgatt tccatatttt atacagttgg tttcttacgt
     5881 agaacaccaa ttaatcctgc gctgattaat gttccaataa taattgcaat aatatagaac
     5941 caaggttggg atacaaggaa gataacaaaa actcctccgt gaggtgctaa tactttaatg
     6001 tttaagaaca ttactaccgc acctgtgata gcacttccgg caataaaact cggaatcatt
     6061 cgaagtggat cggccgctgc aaatggaata gctccttcag taatgaatga agcacccaaa
     6121 atagagttag ttaagcctgc atcacgttct tgagctgtaa atttatttct aaaaataaga
     6181 gttgctacaa acgttgctag tggtggtacc atgccagcag ccattgttgc tgccatgatt
     6241 gcgctaccgc ctgttgctac actagctgcg agtgtacccg ttgcaaatat ataagcagct
     6301 ttattaattg gtccacctaa atccgctgcc atcattgcac ctaacagtaa tcctaaaata
     6361 actgcgttcg ttccgcttaa actattcaag aagtcattca accaagtgtt caatgcgctc
     6421 attggtacat ttaatagcaa cattaaaagt ccgacaatta acaccgataa aactggatag
     6481 aataaaacta ctttgatacc gtctaatgtt tttggtaact ttttaagtgc tagtttaatt
     6541 aactctactg cataacctgc aaggaaacca ccaacaagtg ctccaaggaa gcctgcacca
     6601 ccaacagatg ctactccacc tgcaacaaaa cctgctacaa gtcctggtct atccgatata
     6661 ctgtaggcaa tatatccagc gaatactgga agcatgaagc cgaatgcaac atcaccgatt
     6721 tgttttaata gtgctgggat ttcgttatat gaaccaagtt ttgcgagttg atcttgagga
     6781 acacctaaca tttgatcaag cataaacgcg atggcgattg cgatacctcc accaattaca
     6841 aacggcaaca tgtgagaaac accgctcatt aaatgtttat aaatttgttg accgatagaa
     6901 agtccgtctg cgctctccgt agcttgacta ccttcctctg ctttataaat tggagcattg
     6961 cctgaaattg cttctttaat tagttcttct ggtttatgaa ttcccgctgc aaccggttta
     7021 gcaattaaat gcttcccgtc aaaacgaggc atatctactt gtacgtcagc tgcaataata
     7081 actccatcag cttctgcaat ttctttatct gttaaacggt tttcaacgcc tctagagcca
     7141 tttgtctcaa ctttgattcg tacacctaat ttattagcag tttcttgtaa tttttctgca
     7201 gccatataag tatgtgcaat tcctgttgga catgctgtaa ctgctacgac tgatttacca
     7261 gtttcattgg ttgaggttgg agcaacgact gtttcttctg cgtcttcttg ttcattgttg
     7321 aataaattga ttacttcctc tggagtttta gcatctctta acgattgcac aaacgctgga
     7381 tgaaccaata atctagaaag agctgctaaa gtttctaaat gagttgcatt agcgccatct
     7441 ggagcagcaa tcataaagaa taagtgtgct ggctgaccat ctaaagcatc ataatccaat
     7501 cctttttcac tcttagcaaa aacaacagtt ggttcattta ctgcttttgt tttcgcgtga
     7561 ggcattgcaa ttccttcacc tacaccagta gaactctgtg cttcacggtt cattatagct
     7621 tctttaaaca gcacctcatc attaattttc ccgttgctct ttaacgaagc aatcatttca
     7681 tcgatggcag cttcttttgt cgttgcctgt aatgacataa tcataacatc tttgcttaat
     7741 aaatcagtga ttctcatttt agttcctccc tgttattttg gttatcttca cttgcggtaa
     7801 tagttcatct attagttctt tttgggctaa atctgttgaa aatgcagtag ctccacctgt
     7861 tgcaactcct gcagcaaaag ctttaacggg atctctcgtt ttatcaaaag tcccaacaaa
     7921 gcctgcaatc attgagtctc cagcacctac ggaatttttc agttcccctt ttaatgcatc
     7981 ggcgaagtaa acatcttctc ctgtaaatag aagcgctccg tcaccagcca tggacacgat
     8041 tacatgttgc gcgcctaatt ctaaacattt tttcccgtat gggataagtt cttctacgct
     8101 accaagtttc acgccaaata ggtctgctag ttcgtggtga tttggtttaa ttagaatcgg
     8161 gtggtttggt aatgcatcta gcagttcttg accagttgta tcaatcataa attcagcttt
     8221 tttttctttg caaatttgaa ttattttatt gtaaaaatca tttccaagtg aaggaggcac
     8281 actaccagat aaaataacaa tatcgttagc agttacttta tccatcactt tcaaaaatcc
     8341 attgatttct ttttcagaaa tagctggccc tagaccatta atttctgttt cttctccgtg
     8401 ttttagtttg atattaatac gagtgtcatc tttcactgtt acaaagccag ttttcacacc
     8461 ttcgttttgt agccagtctt tgataaaatt gcctgtaaat ccacctaaaa atcctgtagc
     8521 aagacttggt acatttaatt gatttaaaac tctgctgaca ttaattcctt tgccaccagg
     8581 tagtttataa tcttgcttca tgcgattaag accgccaaga tttaattggt cgatttgtac
     8641 aatataatca attgatgggt ttaaagtaat tgtataaatc atttttctac ctcgattatt
     8701 ttagtttttt ggataaagga ttcttttact gcagaaggaa tgtaatctgt cacaatagtt
     8761 gcttcttcta ttgaaaacat ttttgaaaaa ttcacttcat tgaattttgt atggtctgct
     8821 acaacaaaaa cgcgatcagc acgttctttt gcagcacgtt ttacaaatgc ctcttccata
     8881 tcaggtgttg tgtagccatg ctccggatgc atcgcgttgg taccaatgaa agctttatca
     8941 aaatgatagt tttgaatgtt atctaaggca actgcaccaa taattgcttt tgtatgcact
     9001 ttcattttgc cgcctaaaag ataagcatct atattttgac gaacaagctc ttcaatatgg
     9061 gttaatccat ttgtcactac tgtgatattt cgatttgcta ggtgagtaat taattctaat
     9121 gttgtggatc ctgcatctaa atagatacaa tcattttctt ccactaggct tgcacaatat
     9181 acagcaatta cttttttact ttgaatgttt ttgaatgatt tttcattcat acttggttct
     9241 tgattatgaa gttttacaag tttcgccccg ccgtgtacgc gctgaattaa tccttgttct
     9301 tctaactcga ttaaatcacg gcgaatggtt gactctgagg tagcaagacc ttcaactaat
     9361 tcttgtaatt taatcacacc aagtttctca atactctcca taataagttg tttacgctct
     9421 gcatttaaca ttattactcc tccatccaaa gtcagtttac catcttttcc tttcaaaatc
     9481 aaccgttttc attcaaaaac aatcacacat tttcaaattc attcatatta taccatgtat
     9541 atcgccataa tccttcacaa ttattcattc agcgtttttc ttatacagtt ctaattttta
     9601 gcagtatact tggttagaag ataattttca ttttaggagg agttattcat gcatacagaa
     9661 ttaacatttg agcaattaga aagtttttct cgaaaatggc gtgaaaatcc agataaattg
     9721 gtatttcaag ctagtattat caagaatggg attaaagcag caactgagaa tcctgcatca
     9781 aaagttagca ttcaacctgt cttttcccac gaagttgcta cagataaagt ttctaatcaa
     9841 caacaaagtg gaagatgctg gatgtttgca gcattaaata cgtttcgcca taaattaaac
     9901 ggaacgcttg gtttgaagga ttttgagtta tcacagaatt atactaattt ttgggacaaa
     9961 cttgagaaag caaattactt tttagagaat ataattgaaa cagcaagtga ggatgaagat
    10021 agtcgattag tttcgtggtt gcttgataca ccccaacaag atggtgggca gtgggatatg
    10081 ttagtttcaa ttattgaaaa atatggagtg gttccaaagt cagctatgcc tgaaacgttt
    10141 caaagtagta agtctgctga tttaaaccat ctattaaatg aaagacttcg tacggatgcg
    10201 gttattttga gaaatgctat tgctgagaag aaagatactg cagatttgaa agaagaaatg
    10261 cttgctgagg tctatcaact cttggttatg actctaggcg aaccacctaa agtattcgat
    10321 tttgagtatc gaaataaaga caatgaattt aaacaagaat tacaaattac acctaaagat
    10381 ttttatgaac gctatgtaga tatggatttg aaagattata ttccacttat taatgcaccg
    10441 accaaagata aaccttttaa tcaagctttt acagtggaat atttaggcaa cattgtaaat
    10501 ggtacaccta ttaagtattt gaatgtagaa atggatgtct tgaaaaaagc tgctgctgat
    10561 cagattaaag atggggaaac agtttggttt ggatgtgatg ttggacaact ttcagaacgg
    10621 aataccggta ttatggatac ggatattttc ttgcttaatc agacttttgg ctttaaaact
    10681 gcgatgacta aagctgaacg cctggattat aaacacagta tgcttacaca tgcgatggta
    10741 ttaactggag tgaacattgc taatggagaa gtaaatcgct ggaaagtgga aaatagttgg
    10801 ggagaaaaaa ttggtaataa tggttatttt gttgctagcg atgcttggat ggatgagttt
    10861 acattccaag tagtggtgca taaaaaatat ctatctaagg aattaattga atcctttaac
    10921 caaaagccaa ttgtgttaaa accttgggat ccaatgggtt cgctcgcact ttaaaatgcg
    10981 aattcggaaa tgatttttat tccattcatt tgaaaaagag ctgctgctac gccggtacca
    11041 tcttttattt ttcctgagaa ggtaccgtcg taaatagcac agctaccaca agatggactt
    11101 ttttccttca tgattatttg cgtaataccg agttcttgca ttttaattag agtaagtctc
    11161 gctccgttct tatattcttc tgtcacatct gttcctttgt tatcaatgac ttttgcatgt
    11221 cctaaccaga catctttgcc atcaccacct attatttctg ctggatttct tggtgtaggc
    11281 agtccgccgg taacttctgg acaaaaagga atcgcttctc ctctttctac catttgtttt
    11341 attttggtta tttctttatc tttcccgtca tatctacagg caattccggc taggcaagca
    11401 cttactgcaa tcattttatt ttcctccttt atattcacat ttattttaac ataaaaaagc
    11461 tgcccccaac ttataggcga cagctctgag attattagat attttggtat gctacggcga
    11521 tttgcgtacc gattaaagca ttgtgtttta caagctcgat atttgcttcg aggctcttac
    11581 catctgttag ttcttttact ttaccaagta ggaatggtgt aacgtctttc ccgtgaatgt
    11641 gattttcttc agcttcttta agcgctgttt ggattacatc gttaattact ttttcgtcca
    11701 tagcgaattc ttctgggatt gggttagtaa ttactgcgcc acctttgatt tgaagatccc
    11761 atttcgcttt aagcgattct gcgataactt ctggagcatc tgcacgcaat gttaattcta
    11821 catcgcttga acgcgtgtaa aatgctggta atacgtcggt ttggtaacca ataactggaa
    11881 ccccttttgt ttctaagtat tccattgtta agtttaggtc taggattgat ttagctcctg
    11941 cacaaacgac agcaacattt gttttcgcta attcttctaa gtcagctgaa acgtccattg
    12001 ttgtttcggc accacggtga acgccgccaa tcccaccagt tacgaagatg ccgatttctg
    12061 cgagttcagc acaaatcatt gttgctgcta cagttgttgc gccaagttgt tttgttgcaa
    12121 taaggtaacc gatatcacga cgagaaactt ttgccacatt gctactttta gcgaatagtt
    12181 ctagttcttc atcagaaaga ccaattttaa tttttccgtc gattaaagcg attgtcgctg
    12241 gtacggcacc gttatcgcga ataatttgtt ctacgtcacg tgccatttca acattttgcg
    12301 gataaggcat gccgtgagag ataattgtag attctagcgc aacgattgct tttccttctg
    12361 cttttgcttg ttttacttct tcggataatg ataaataatt tttcatttga attcctccat
    12421 gtctttttgt agttgggatg tcgataaatt ttggcgaacg gtatactcag attcgagtgt
    12481 tcgcgcggca tttacgctcc ctgctcttaa aatttctttc aatgcttttc cttctaacca
    12541 tgcgtagata accgcggagc aaaatgcatc tcccgctcct gtcacgtcta caatattttc
    12601 aattacaatt gctggttcaa aaatagtacc ttcacctttg tttgctgcaa ctgcgccttt
    12661 actgccattt gtaacgatga cattttttac gcctagatct aaccattttt gtgcagctaa
    12721 gcgccagtct tcgtcatttt tgatagtcat tcctaggtgc gtttctgatt cgtctcggtt
    12781 gcaaattagc caagttacat gatcaagtct ttctggtaaa tgagacattt tgggtgaaga
    12841 cacaggaacg agtactaatg gaattgaatt aatttcagca aagctgccaa gatattctag
    12901 tgtttctttc ggacagttta aatctgcaat gattgcgctc gcctgactca gcaagccttc
    12961 attttttgcg agtacatctg gagttaagtg atcatatgca tccatgtccg ctagtgcaac
    13021 gagtaaatct ccattgtttt cgagcactgc tgtataagaa ccagttgcga tgcttgggaa
    13081 tgctgtgacg taatctaagt tcatatatgt attactagca tttttgacag cttcccagtc
    13141 agagtctgtt ccacaagcag tgagtaatat aacttctttt ccgaggcgtc caaggttttc
    13201 gcctacgttt ctagcaaccc cgccagcact ttgtgttgag cgcactgggt ttgatgtggc
    13261 tagttgggcc ttgtctttaa tataaaactt ccgatcgacg ttagctccac ctatacaaac
    13321 gatttgtttg gcttcattta aaatataagc ttttcctaaa atgcgacctt tcttaataag
    13381 gccggaaata aggtttgcga ctgtcggtct tgataaatca agtatgtcag caagttcttg
    13441 ttgagaaatg taaggatttt tacggatgga attgaaaatt atctcttcct tttcgttcat
    13501 tttcgcttta ttattctcca cgatataatg cacctccatt ccaaactttt gttttatttt
    13561 caaacacatg tttattatat atgtaaatgc tttcttttgc aaactaaaaa acgaaaatcc
    13621 gcttcttttt aggaaggaaa ttttcgttta ggttcattta ttttgaagaa tagccagttc
    13681 actttcagtt aaagggcggt attcgccgag tccaagtgac tcgtctaatt gtaaattccc
    13741 catcgaaatt cgttttaaat agctgacttt cttaccacgt gcggcgaaca ttctttttac
    13801 ttgatggaat ttcccttctt ggatagtgac gtttatttcg tttggtgtaa taatttctaa
    13861 acgtgctggt ttgcaagtgt atccatcgtc gagttcaatt ccagctgcaa aagcttctac
    13921 atcagctaga gtaacatcac catcaatttt agcgtagtat gttttatcta tatgtttttt
    13981 aggtgagagc aaattgtgtg cgagtgtgcc atcgttcgtt ataattagca agccttctgt
    14041 atctttgtct aagcggccga ctgggaatgg atcagtgagc gtgtcttctt gcgcaagcaa
    14101 atcgatgacg gtttctgaca cattatcctc ggttgcgctc acgacatttt gtggtttatg
    14161 tagcataaaa tagacgaatt cttggtaaac gactggtgtt ccatggacag ttacttggtc
    14221 tttatcaggg tttacttggg ttttgctatc tttctgaatc gtgccattga cgacaactgc
    14281 cccagattta agcaaaggtt tcacttcttt tcgactcccg aaacctgtat gggacaataa
    14341 tttatctaag cgcatggttt cgctcctttt tttcttttat tgtaacaaaa aaacgaagct
    14401 tcctcaaagg tgctccgttt tctttctatt atttagtttc aacaacttgt ttattttgag
    14461 gtattgttaa gccgaggttg cctcttaatg tcgtagctgg atattcgttt cggtataaac
    14521 ctcgactttg cagaagagga ataacttgtt ccacaaaagt ttcaaacgtt ccaggaatat
    14581 cagaagcaat aataaaacca tctgcagcat cattttggaa ccaaacatcg attaaatcgg
    14641 ctacttgttc ttttgttcct ataaaaggtg tttttggcgt tgctgcttct gttgccactt
    14701 gacgaagggt taggtgccgt tctttcgctt cttttttgat tcggtctgtt gtgctttgaa
    14761 aggcattttt gccaatatca ccaaggtctg ggaatggagc atccaaatca aattgactta
    14821 aatcatagtc gtcgaagtaa cgtgctaggt aagttaccgc attttctatt ggaattaggc
    14881 tagcaaattc agtatatttg gcttctgctt cttccaacgt gtccgctaca attgggctaa
    14941 ttcctgggaa aattcggact tcatctgcat ttctaccagc cttttcagcg cgggctttca
    15001 catcttgata gaattcaatg gcttcttcta aggaatcaga atgagtgaaa atggcttccg
    15061 cgtttttagc agcgaaatcg cgccccgtac tagacgcgcc tgcctggaaa acaactggtt
    15121 ctccttgctt cgagcggccg atatttaacg gcccttcgac ttggaaatac tctccttgat
    15181 gatttaaacg atgtaatttt tcaggattaa agaattcacc ggtttcttta ttataagtga
    15241 acgcatcctc ttcccaagaa ctccagagtc cgcgaaccac ttttaaatgt tctgctgcaa
    15301 tggtgtagcg atcgctgtgg gttgggagat ttttcttgct atgatttcgc gcggcgcctt
    15361 cttgcggaga agtgactaga ttccaacccg ctcggccgcc gctaatgtga tcaagcgaag
    15421 agagctgtct tgcgagtgta aatggttctg taaaagaagt cgagaaagtt ccgacaagtc
    15481 cgatgttttc cgtagactca gctaatgccg ataaaatcgt aattggttca aaacgattaa
    15541 gaaaatgcgg aatcgatttt tcggaaataa aaaggccgtc tgcaataaat acaaaactaa
    15601 ataacccttg ttcggcaatt ttggcgcgtg tcttataaaa atctaaatcc gtacttgctg
    15661 cggggttgat gtccggatgt cgccaaccat ctgttgttcc gccaacaccg tgaataattg
    15721 caccaaactg aattgtttct tttctagtca ttttacttcc tccttttcaa acaatgcttt
    15781 ttccaaatgt tccaatccga tttctgtaac tgcttggtag gtcccttttt caatatcgcc
    15841 gatttctacg actgggacat aacgaatgcc gtatttcgct tgcagtactt ctcgcaaata
    15901 atcatggtcg gtgacgtcga tatcttggaa gacaattttt tgctcagtta aataatcttt
    15961 cacatcttta caataatgac atcctacttt actccaaaca acgacgttag ccatggacaa
    16021 cttcctcctt tatcgattca cttaataatt ggtacgagta tcgcttgatt tccgtagatt
    16081 taactggtgt taaaacaaca aaatcttgga tattatattc ttttgaaagg cgtttaatct
    16141 ctgctccgac ttcttgtttg gttcctgtta ttgcaccaat tctttgggta ataaaccggt
    16201 atgtttggtt gatatctttt acgtaggatt ccgcttgttc gcgcgatccg acattaactc
    16261 tacgtccgtc cgcaagctcg actttgattg actctcgctc tggaatatgt cggtctgctg
    16321 cgattttagt ctcagctact acaacaattg gtgctagttg gaaactagct tttgtgttta
    16381 ttcggtactg ttcaaatagc tcgcgtgctt cttttaaaac agcttcttct ccatttataa
    16441 aataagcaaa cacaaaggaa atacctagtt tggcagcttg tttcgcgcta gctgcacttc
    16501 ctccaagcaa aaatatctct ggtttgtttt ctggaagtgg ttttgctgca atagccacct
    16561 ctgaatgatg ggttacaaaa tcgactagtt ctttcaattt ggcatcaaag gttcgcgtag
    16621 gttttacgaa gtctttttga agggcatcgg ttgctggttg aaatccgcct ggcgcttttc
    16681 cgacgccaag tgacatccga cccggcgcta agttctcaag cacatgaaat tgttcagcga
    16741 ctttatatgg actataatgt tgtagcatta ttccgccaga tgcaagcttg attgtgctcg
    16801 tttttgcagc aatataccct aaaagaactt ccggagctgc gccagctatt tcgtctgaat
    16861 tatgatgctc ggcaacccag aaacgatgat agccgagttg ttctgcgagt tgcgcaagtt
    16921 ctacggtatt ttgcaaagct tcactaggtt tttcgcctgg atttataata ctttggtcca
    16981 aaatactgaa tcgaatcgtc atatgacacg ctcctttttc acttctttga tttcatataa
    17041 ataatccgct gaaactcggt gtaaaaagcg ttttgtccgt tcttctttgg tatgattaaa
    17101 cacttcatcg ggagtacctt gttcgacaat tagtccacca tccataaaaa cgacttgatc
    17161 tgccactcgt ttggcgaact ccatttcatg cgtaacgacg atcatcgttg cacccgcacg
    17221 tgcaatctct agcattactt ccaatacttc accgacaagt tcaggatcaa gtgcggcggt
    17281 tggttcatca aacaaaatga cgtctggatt aatagcgagt gctcgtgcga ttccaacgcg
    17341 ctgtttttgc ccgccggaaa gttgggaagg ataggcacta aatttgtccg ccaaaccgac
    17401 ttttgtgagc tctcgttctg ctatttcacg ggcaattttt ttcggcattt ttctagcgac
    17461 tgttagaccc tccatcacat tttgaatgac cgttttgtgc gaaaagagat tatactgttg
    17521 gaaaaccatc gccgtatttt tccgcagttg caaaacttct tttttggatg gtttcttaca
    17581 gttaattatt tggtcatgca tcgaaatttc accattttca ggtcgttcca gtaagtttag
    17641 gcatcgtaaa aaggttgttt tccctgagcc acttgggcca agtattgtta ctacttcacc
    17701 ctttttcacc gttaaatcaa ttccttttaa aaccttgttt tcaccaaagc ttttttgaat
    17761 atttttaatt gtaatcatac tgttcctcct cgatatttag cgatattttt ttccaagata
    17821 taattaatcg cttcaatcaa aatagttaaa aaccaataaa tgagtgcggc accgataaat
    17881 gcttcgagaa acgcgtaatt gtcggaagct actattgttg ccattccagt gatttctggg
    17941 actgcaacga tggcagcgat ggatgtggta tgtaaaaatc cgatgcacaa attcgtgaaa
    18001 ttcggtaggg caatcatgaa ggcttgcggt aagagcactt ttcgaatcgc ttggccatgc
    18061 gtatatccta cagagtaagc cgcttccatt tgtccgatat caaccgcaat aataccggag
    18121 cgcaaaatct cggttaagta agctcctgcc gtgaaagaca gcgcgataat gacaaaaata
    18181 acgaccggta ttttgtttgc agaaatgcct aatccgaatg atttgctcaa aaaatccacc
    18241 aataggggaa tgcctaggta aatcagcata atatgcagaa tcgctggggt gcttcgaaaa
    18301 aaagaaacgt aaaacttcgc tatcggttct aaaaatcgga catgatacat ccgaatcaac
    18361 gtcataccta tagcgataat gaaaccgaac aatatcggaa agaaagtcat cgcaagtgtt
    18421 aacgggatag tttttaacat tgccattacg gcggttccaa taaaaggcac atcaagcggc
    18481 atcattatct ctcctttata actcgatatc gaaaatactc gtgaatctgg tgttttcttt
    18541 tttaactcgt ttttcaatcc atttgaagga atattccagt aagacggccg tcaaatagta
    18601 aataattgat aaagaaatat agacctctag cgcgtgatta cttagtgtta tcagcgtctg
    18661 acctcttcct gacatatcca ttactccaat cgaaaaagcg agcgacgtat ctttcaaata
    18721 accaatgact aaattgccaa aattcggtag agcttgatag agtgcttgtg gcaagatgat
    18781 tcgtaaaaac gtttggcgac tactcagacc aatactataa gccgcctctg cttgtccggc
    18841 atccacgctg ttcacgcctg cgcgaatcac ttcggcaatg gtcgctgcac tgcttaacgc
    18901 ataagtcgca atcgcagcat aaaggggatc catttgtgat aaatcaatgc caacgatgct
    18961 tgaaagtgcc gggattccgt aaaaaacaat aaatagttga accataatcg gcgtcccacg
    19021 gaaaaacgaa atatacactc tggccaattg atctaaaact ggtatcttat aaattcttgg
    19081 taaagatagt agaacgccta atataaatcc aaaaataagc gagagtgcca aaatatacaa
    19141 cgtaatcggt aaataaccag ctaacgttgg aataaaatca gcaatcattt tcacatcgaa
    19201 cgctttatcc attttaatgg caccctccct cgtttaatat tgttcttttg aataatctgc
    19261 gccaagccat ttttcactta attttttaag tgttccatca tcaataatag attgaagcgc
    19321 ctcatctaca tctttgctta gtttcgtttc atcttttccg agcatgaagt atactttcgc
    19381 attagataga acatcgccaa ctactttttc tttgatagcg cttgttttat tttggaaatc
    19441 taccgcgaat ggtgtagaaa tcgttgcatc agcgcggcca gttttcagtt ggttcgctgt
    19501 atcatttgac ccttgacctt cataagcaat ttcaaaatta ttgccttgtt cttcattaat
    19561 ttttttcaat acgagcgcac cattcgatgt tgcgcttgtg ataacgcgtt ttccagctaa
    19621 atcttttgtg ctgtttatgc tgttattact gtctaatacc gtcaattgta atgggaaatt
    19681 attgtatgct acatcattaa ataaaaattt cttctcgcgt tctttacttt tttccatttg
    19741 atgcgcgaca atgtctactt ttccagctcc aaggctaacg agtaaattag aaaaatccat
    19801 cgttttaaat ttaaatttat agccgggcaa acgtttatcg atttctttta ctagttcgac
    19861 atcataaccg gttaatttcc cattttcatc caaaaagcag acatttggaa attgtgttcc
    19921 agtgccaacc gtgattgttt gtactttttg attcgctgct tctggttctt cttttcctcc
    19981 acatgcgctt aatgttaatg cggctgtaag agccagtgcc aaaatcccat atttcttttt
    20041 catccttttt cccccttttt tatgtccagc taggtattcc gagtagtgtg gcatcgaatt
    20101 tttccggaat taagattttc cgcatcataa cacccacatc accgtcttcc tcatgttcaa
    20161 agtagacctc ataaccgcgg cgtagataca tatccagcaa ccacgggtgt tttctagcag
    20221 aagttccaag tgtcagtgcc ggtgctttta gcgtgtcgcg aagtacccgt tcttctacat
    20281 acgttaataa tttatcgcca atcccctgtc ctgcaagttc cggtgccgtt gcaaaccacc
    20341 aaacaaatgg atatttagaa ggtggagagc tgctctccca cggaaaacga acggtaatcg
    20401 tagaaattaa tttgccgttt cgttctaaaa caaaagcaga agaattaaca atattttctg
    20461 tcaccatcgc taaatccgca ttcgttgacg gccaatcaat tcctaattct ttcaccgatt
    20521 gaaaagcact cgacaacaat tccaaaaatt ccggcgcatc atccacagtc gctactctaa
    20581 aaatatcttc tgtcatttcc cgctctcctc cttaaacttc cactgattgt tgatttaata
    20641 atgaaatgaa ttggtttaaa gcaatatcta gccgttcttt cgctgaagat tcaatttcat
    20701 acagcccatc cccgaaccgt tcaatttgtt tgtctaccgt aaactgccct tttaatatcg
    20761 tttctgctcc aagttccttc aacacaggat caagtgcgta ttgcagtgcg agcaaatgtc
    20821 cgtttgatcc accaagtcca agtggcaaaa cgactttccc tttcaaagct ttgagtggca
    20881 aaagatccaa ataggctttc aacactcctg aataggctgc tttgaaaatc ggggtagcaa
    20941 taataacgcc cgaacttgat tcaatttcac tatttgccaa ttgaatatct gaatgcgcga
    21001 aatcagcggt gactaatgct tctgcgttta ttttatgcac ttcgatgatg ttcacttcta
    21061 aaccattcgt tactaattca tttgctgcta gttgagttaa tcctgtaagc ctggattctg
    21121 ttttgattcc cccagcaata attgtcactt tccccatcaa atcgcccctt ttcaatccct
    21181 atcaacttac ttggttttta gatattagct atactataaa gtaaaagatt gggtttggct
    21241 aatcaaaaaa actaatggct aaccacagta atactaatac ttctgcctga atccgcatta
    21301 ttcctatgaa ttttatcaga ttaataaatt gcttctccta tttttacagt gtatactgtt
    21361 agaaatatca aaaaactcca atatgaaggg ggaattatat tggaatttcg aaccattaaa
    21421 actttttata cggtggttaa tacgggaagt tttcaacgcg cagcagaagt attaaattat
    21481 tcgcaaccga ctatttcgat gcgaattaaa caattggaac aagacttaga tgttcagtta
    21541 ttcgaacgtg gcaaaacttt aaaactaacg cacgcaggta gattatttta cgaaagggcg
    21601 ggccagctca tcgctcaata tgaagtactc gatcacacga tattcgactt aaaaaatggc
    21661 aacgccggcc ttatcaaagt tggaatttcc gagcctagcg ctagtctcgt ttttccgaaa
    21721 attttaaaaa cgtttctagc ggattttcca aagttaatgg tgaatgtatc ggtggatgat
    21781 gcgaatactt gtagccaaaa actcattgat ggggaaattg attttgcgat ttgcggagaa
    21841 ccagagctga ttttggagaa cttctatttt ccatttttcc atgattcgtt agatttaatc
    21901 gtctcagaaa gccatccgtt agcttcacgt acttctgtgg agttacgtga tttacgcgat
    21961 gaatgcttta tcttcacacc ggcaaattgc cccatccgca tccaaatcga acagcattta
    22021 aaacgtgcta ttggtagtga ttataagaaa atggagctca caagtagtat gtcacataag
    22081 tattttgttc gtgaaaatgt tggtgtatct atctttacta gcaccgcgca ctcagaacta
    22141 cttgatggca cggtccgcat tccgattgaa aatttaccca tctcaccgcc aattggactt
    22201 ttaactaacc aaaaagaaaa agattttgac agcacgacga aagaacttat cgaccggatt
    22261 atttattatt ttgatgataa aaaaagacag ctaggctaaa aaattagctt aactgtcttt
    22321 tttattaaaa ttctaattgc atattcgcct ctatcgcaag taaattatca cgatacactt
    22381 tcatttcttt ccgcgtaatc gtaccttttt caaagtagtg ttgaattgtt tcgcgctcaa
    22441 tttgtgaagc taagtcaatt gttgtttgta gcgcttcatc attgctttct tttttatttt
    22501 tcccacgacc caatgctcgc tcaaaattca ttaaataaag cgaaatgatt tctgggttat
    22561 actcatttga atccagttct tgtagttttt gaatgacgaa tagattgttt tcattttgca
    22621 gtttagcaat ttcttttcta cgttcttcaa aagtaagagg cacaaatcgg aagtctcgaa
    22681 aacgatgact taataactgg cgataccgca ttctcgctcg gtacttctct gctcgtgttt
    22741 ggacgtagag tcgttttcca agccgcatca tatgcgaaag tcccacacca gtatcaattt
    22801 ttcgttcaaa tactaatctt ctcgtatttt caagttgcca ttcttgcgtt aatcgccgca
    22861 attctttttc agtagcattt acttccttat gctccatcaa agagaaaatc cgattattat
    22921 acatattcaa cactttattc atttccactg tattttcatc tgttttatac gcctgtaatt
    22981 gctgcacaat atcgcgaagt agtacaatat ctgtcgtatg atccgccgca attttgtctt
    23041 tcttatctgc aaaaagtggc aaggtgaaat tggccaaaag tagcgtcgta ataataactc
    23101 cagcagcaat aaaaataagt aaatcacgct caggaaacgc attcccatta ccaagaacaa
    23161 aaggtaacga aagcgcactg actaatgtaa ttgtcccgcg aacaccagcc acagtataaa
    23221 gaaaagtatt tttcaatctg ctaaccaagt ccactttcgg attttcctcg taattgcgga
    23281 aaaacaagat ccataaaaac cttagcccga gcagtaagaa agtgattcct agtatataca
    23341 cgaatagcat acctttttga atattagcat cttgccaaat cgtcatcaaa atttgcggta
    23401 attgtgtccc tagtaagata aataccaaac cattcaaact aaaaataata acagaccacg
    23461 tgttttttga aagcaagttc aattgcgcaa tttcaggatt tagtcccttg taactaaatg
    23521 aatgcaccat tccgccacta actactgcta aaatcccatt tactccaact ttttcggcta
    23581 ccataaaaat taaaaatggt aacaaaattt ccatcagcat aaaagaagtc atattttcga
    23641 ttcctagctg acgtaaacca cgcattaaca tgattttcag taaactaagg gcagctccaa
    23701 gcgcaatccc acctaatgaa agaagcaaaa agcttgttcc agctgacata aatgagaatg
    23761 ttccggttac aagcgccaac acagcaaact ggaacgaaac aagtccggaa gcatcgttaa
    23821 taagcgattc accttccaaa atatgcataa ttttatgggg tactcttact ttttcagcca
    23881 gcgcccccac cgcaacagca tccgtaggcg caagtgccgc agctaacgca aacgccgcgg
    23941 caaaaggtat cgcaggaatt aagtagtgaa taaacgcacc cagtacccca accgttacaa
    24001 acactagccc aatcgataat gacaaaatag ccttccgatt tttccataaa gatttcttat
    24061 ccgtactcgc cccatcgtta aaaagaatcg gcgccataaa taataataaa aataattccg
    24121 gatttaaatc catcgtatga tccccaagcg gaatcgccaa aataatccct agtattactt
    24181 gaattaaagg cactgcaatc cccggcaaaa atcggcttaa tacattagac aaaaacaccg
    24241 cgctcaacat taataaaatc agttcaaata tttccattaa tacatccctc gttcccgtat
    24301 ccgtgccact gagtcagaag cgtggcattt cttccgttcc catattagca aaaaaacttt
    24361 tcagaaacat ccgtctctgt atggagtttc ctagctattt ttacttcttc tgatagacaa
    24421 tttgttcgtc tacaactgtc atcatagcgc tcacttgacg aaggtctgct tgtttcattt
    24481 gaaatggatc ttctgccaaa atcgtaaaat cagcaacaaa acctggtgca atttgtccgc
    24541 gtgtagttgt tttgtagccc gcaaatgccg cgccttttgt atatagttga atcgcttcaa
    24601 atacagtgag tgcctgctct ggccaatatt ctactccatc caaatctgca ttcgccgttc
    24661 tagtaacagc cgcatggata ccccaaaacg gattcggcac ttcaatcggc gcatcgcttc
    24721 ctccagctag tgggaaacca gcctgtagaa gcgttttcca agcaaaagct agcggtggat
    24781 gattttctcc aagtacttct agcgcccacg gaagatcact cgtcatgaat tgcggctgta
    24841 tatcaaatag cacaggtaac ccggccgctt cttctattag cgcttctgta agccaaggtg
    24901 tgtggattag tctgtcgtat tgcccttctc taggcggatt ggcacgtaac gttcgaataa
    24961 cattagcaaa ggcttgatcc cctaaaatat gaatagcaac aggtaatcct gcttttcgcg
    25021 ccgctttaac caaatcttca aacgcttgat cagaatgaat ttgcagtcct ttttcatcag
    25081 agttatccgc atatcccgca ctcatcaacg ccgttcgcga gccaactgtt ccatcataga
    25141 aaattttcat cgcccctaat tctaaaaagg catccccact tacgaaactt tcattagaag
    25201 ccgaaaaagc agctagttct gcgtggtgaa ccagcaaatg cgcacgaaac ggcattttat
    25261 tagcaccaat agtatttcga aaagcagcta aagtcgaagt gaatcccgtg aaataatgta
    25321 aatcttccga gtgtgcaccc gttatgcctt tcgaccacag atcagttatc gcgattttaa
    25381 gccatgcgct tagttcagaa ggcgttgctg cagggaaaga atctatcgcc atagtcgttg
    25441 cattatctct taaaatcccc gtaaaattac ccgctttatc acgaacaatt tcgccgccac
    25501 catcaaaacc attttccgaa aaatcggcaa tatgcgcttg taatgcagaa ttaatagaaa
    25561 cactatgata atcaatgcgc cgaactaaaa tcggatttgt ctggcttact tcatctaaat
    25621 cggccaaaga aatcaacgtt tgctcatctg accatttatt ttcatcataa ccttccacaa
    25681 acaaccattc atcactagca agttgctttg ttctttcagc aatcagggct agtgcctctt
    25741 ttttagtagt ggtttggttt aaattaagac gttctaaagc ttgtccatac caaagtaagt
    25801 gaatatgcgc atcaacgaac ccaggaaata ccactttctc ttctaaatca atcgtttcgg
    25861 taatattagc cgcatgttgt ttttctagtt ctcgtgcttc tccaaccgca taaatatgac
    25921 cgttttctgt taataccgca gaaacttgat ccccttcagc tgtcatttgg taaaaggtag
    25981 catttttcca taatttcatt ttttattccc cctgattgac ggaaattttc aaagctgctt
    26041 tatcttgttg gtcctttttc tgtaaaattt gttgtagtgt aatactaatt aatgcgcatc
    26101 cgagtaaaat aaatgcgcca ataaatagag ctttaatgcc tccgagattt tgaacgacaa
    26161 ttgctcctaa aaatggtgct agcatgcgcg ctgctgttgc catcccgttc acaagacctt
    26221 gatacaagcc agccgctcct tttggtgcaa gttgataagc aatcgttgga atcgctggcc
    26281 aagcaaacat ttccccgagc gttaagaaaa tcattccgag tacaaagcca ctataaacac
    26341 ttgcattcat tgcgactaca aaagataaga taaataagaa aataccgata taaatttgtg
    26401 cgagtaaata ttttttaaat ctgtttacaa cggggattaa aatgagctga ccaagtacaa
    26461 tcagcgcgcc atttaaactc cataaatttc cgtattcgct cgatgtcaca cctttgattt
    26521 ctgtcatgta cgtagataaa ttcgactgcc actgcacatg cggcaattgg caaagcaagt
    26581 atgtcaataa taatagaata aaagaacaca aagctagttt agtcggaaat tcgagtttag
    26641 cgcctttttt gcgatgtttt gtttctgcgc ttactcgctc cgatttccaa tcaatcttgt
    26701 ggaaaaagaa aaagaaatat ccagcgaaag caatcgcaaa tacaaaagaa ccaatgtata
    26761 catgactcat tccttgtttc gctagaagcc ctgcaagcaa cggaccaata gccacgccaa
    26821 tattttgcgc cacataaatc gcattaaatc cagttcttcc tccagtcgga tgtgttaacc
    26881 ctgctgctgc gtataatcca gagaagacca tccccatcgc gataccaacc gcccacaaat
    26941 tccaaataaa gaatggaaat ccgtgaaaaa agcacaacga agcagttgaa agcactaata
    27001 taatcgttcc aatcgtaagt gaaataaaac cagaaaaccg gtcaaaaata agtccgccga
    27061 taatactaga aacaatcccc actccagaat ttatcaacaa cactaatgaa gcgtccgttg
    27121 tcgacatccc taactcttgc gtcatgtaaa tcatattgaa aggccaaata aacgatagcc
    27181 ctgtatatag taacaccatc ccaataatta caatccataa atcctttggt aaccattttg
    27241 tcatttccta cactttccct tcattaaaac tcaccttttt tagggtatca caaccatcca
    27301 cattcgaaaa gaaaaacttc atcaaaaaac cacctagcaa attttgctgg tggctaataa
    27361 gggactggcg ataaatccct atcatggtta cttataagtg tactatgaat tcgaattttt
    27421 gtctgtgcta aattaagaaa tatttcaatt aattttttgt aaaacttttt tataggctaa
    27481 gtctctcaaa taattatgaa attgtaatac atctatttca aggtaatagc ctaattcata
    27541 tagaatatgt tgctgcttca attcttttac ttgaaaagca catatttctt taggaacaac
    27601 ttgcataatc tcttgtctaa aaaaatctaa cgctactttc caggaagttg tatgtaatct
    27661 caaaggcatt tcttgaatga accactgaat gcaatcaatt tcatttcgat ctaaaaaatt
    27721 cttttctatc atggttaaat cagcaacctt aatcttaccc atacttttca agatatcctt
    27781 tacatatgtt aaaggaattt tccaggctac cgttttagag aggggatgga tttttgtctc
    27841 ttctcgagta aaaccaagaa tgcttccttt tccccaagaa ctatttcttg cagcacattg
    27901 tgttacattt ccctcgtcaa ttgcatacac atattcattg ttttctgggc aatgaacaat
    27961 ttcctcctcg ttccaataca ccaattccgc tacttcttga aaccttggat tattagttaa
    28021 cgtaaacatt aattccgttg taaacctttc ctccatttat cccgcctcct caaaatcctc
    28081 acatcaattc atctctcttt atcataataa aaaaaaagcg agcaaagagt tctcaaagaa
    28141 ccatcttctc gcttcttatg tccattttgt gacaaaatca ctttttcagt tttattaatg
    28201 taattttctt agcattttaa cggaaaataa tataaaaaat tatctttatt tccgagattc
    28261 accttttcga ataacccacc aaagagaaag acatgtaata ccttgaaaaa tgaaaaatat
    28321 tccaagtata atcccaactg caatcgctac tagcatgttt gtgaacaagg aaataacagc
    28381 aataatcaat cctataattc ccatgataag tagtactgtc catcctggta aaccttttac
    28441 agcaaacgcc gttaaaatac gtaatatcgc tgaagctagt atccaaatcg cgaatataat
    28501 aatgaaaaca cgttccgcca tatttgactc gaaaatagca aatccaccaa taaggattga
    28561 taaaatccca tcaaacatta tccatttgga aatactccaa tatttttgtt ctccaaaata
    28621 agaaatcact tcattaatcc catttaaaac taaaataatc ccaataaaaa tagttagtgc
    28681 ttgcagtgaa gtacttggat taaacattaa ataaattcca agaccaatca tcgccacacc
    28741 gagaattaaa acgaaatacg tgtataactt tctcatggtt ttgccccctt tttagtgatt
    28801 agtaagtaat gaccctgccg cttcatcaat aataaatacg acattcggat ggttacgtaa
    28861 aatcgacgct ggacaacttt catcaattgg tccctcaagt aaacctttaa cggcttctgc
    28921 ttttcgttca ccagaagcag tgactaagat ttgttttgca tccatcatat cagctaatcc
    28981 aagtgtaagc atttgggatg gcgcttcgtc ttcttttaag ttgttgtaca tgatggtgct
    29041 tttgatagta gattcatcgc tatctgccaa aaacaatcgc gcatcaaatg gtgttccggg
    29101 ttcattagcc ccaagatgtc catttacccc taagcctaga atttgcaaat cgcgctcatt
    29161 ttcagccaaa attttcttat agcgggcaat ttcgtcagta aagtcagcta ggcttccgtc
    29221 caataattcg actctttttg gcattttgtt aattaaatca tagaattttt ggtgcatata
    29281 tgtgtaaaca gtgaaggaag catcgcgttt agccacatac tcatccaaat tcattaaaaa
    29341 tactttttcg attggaattt cgcctgcatt aattcctttt acaagtccct cgaacattcc
    29401 atcaaaactt gctccggtag ttgtattaat taccggatta tcattttcgt taatgacttg
    29461 tttgacaact tcgagcgctt cttgtgacat ttcttcgtat gtttttgtcc tgattaattt
    29521 cataaaaatc ctcctctata agctttcatt acccgaacta ttttttctaa agcaaaccat
    29581 gctttagaaa acttgcgtat aacccatctt cttcaacgga ttttgttact tcatctgcaa
    29641 gtaattttag ctcttctttg gcattcccca ttgcaatacc agtttcacaa taagtaagca
    29701 tttctgcatc attcattcca tcaccaatgc caatcgtcgt gttcttctct gcaccgatat
    29761 gcgctagtag aaattcaatc gctgttgctt tatgaatatc tggcaccatc agctctccac
    29821 tatcgtcccc aaaaatagga actgtgcaat gtaaaacttc aaatttgcca ctaaattcat
    29881 tttttatttc ttcaaaaggt acatttttat tttctaggaa acaagcttta ttgacatctg
    29941 tgcggtaaag atttgtttca ccgtaagtta ggcttgtcat gaaaggatgc ggattattgg
    30001 cttttttctc gcgcgcaatc ggatcattct cgacatcgcc ataaactaag ctatctaaat
    30061 gagcttctag attttcgctt gcaaatagcc caccgtttga ctccaaatag aaatctaagt
    30121 tcttttcatg aaagaaatct accatatgaa caacgtcttc attcgctact tttttatggt
    30181 aaacaatttc atcgtctact tcgatatagc caccacctgc accaataatc ccatcaaacc
    30241 cgatggataa aatcgagtca tacagctctg gtttagaacg accagtgcat agatagactt
    30301 ggtgaccatt gtttctagct tttattatcg cggttttggc agatgctgga acaagcccat
    30361 catccgttac aagcgtacca tctacatcta caaatactat ttttttcgtc atgcaatacc
    30421 tcttttcgta tgttaatagt ttaattatag catttcttta ataagaaggc gccccatcgc
    30481 gtaacaaaaa agcaagattc ccattttcag gaaaccttgc ttttaattta tttagttttc
    30541 taaagccatt aatttttgat tatcatcaag agctgactca tgtgcatcat ggcgtttttt
    30601 caagtggctc atagatagat atagtaagcc aacacatgcg atcatgatga ttgtaagaac
    30661 gagcatcgac atactgtata catttggtcc catacctgct gccagtgact ctctgaacgc
    30721 ataaatcgag taagtcattg gtaagaacgg atggattaaa ttgaagaacc atccagtaag
    30781 tggcattggg aatgttccgc ctgatcccgc taattgaaca atgagtaata ccatcgcgat
    30841 aaaacgacct ggattatcaa atgtcatggc aaggagcatg ataaggaaca tgtaagcaag
    30901 agctgtaata atcgctgttc caaagaattc aacaatgtta tctggtctta gtcctagtgc
    30961 tatcatgata ccaccttcaa gaagtgccat cgcaactgct gcgacaaaac caagtgatag
    31021 tttacttaac caccatttat aagctggttg tccttccatc gaaacacgtc tgattggcat
    31081 gatgaagtta aagacaagtg caccaacata tagagctagt gataacacat atggtgctaa
    31141 tgcatgtccg tagttactta cgtgcgtata ttcattatgt gcgagttttg ttggagcagc
    31201 aatcatgtta aatgttttgt ctgttgcttt tgtatctttg acttgttgtg ctccgtctgc
    31261 tagtttgtct gttaattctg tgctgccgtc tgttaattta gtaagtccat ctcctaattg
    31321 gaaggaacca ttcgctaatt tggaagaacc atcggcaatt ttggaagagc cgtctgctag
    31381 ttgtcctacg cctgaaacta gttttggtga gttagctgat agttggttta gaccgcctac
    31441 taattggctt gaacctgctt gtagttgatt aacgccacct gcaagtgttg gaacttttgc
    31501 agctaattgg tttgttccgc cttgtaattc tgttgctcct gagcgtaatg cgccggaatt
    31561 gcttgcaagt tgattaccac catcatttaa ctgacttagc ccgttttcca tatttgcact
    31621 acccgcagcg agttgtccta cgccagaagt tagggttggc acttggttgt taagttgatt
    31681 tgttccagca actaatttgg cattcccagc ttgtgctgat ttgagtccag cagttagttg
    31741 gttcgcgccg ccaagtagag tttgactacc tgagccatta attgcttggt gaatactgtt
    31801 aaatgcttcg tttgttccac cgtgaactgc ttgataacca gcggaaattt tcgctacgcc
    31861 agtttgcaat tctgttactt gtgtttgaat tgccgctaaa tcaagacctg ataagccgct
    31921 ttgtagttgt tctactgttg ctacttgtgt agcggatttt tgtgtttctt tatctaaatc
    31981 ggcttgaata gcatcaataa ttttttgttt atcttctgca ctcacgccag ctgtcgcatt
    32041 aatttttgat ttaattgctt cagcatcgaa gttcgcatta gatttaataa atgttaagcc
    32101 attttgtagg tcgcttaaac ttttttgtag tgcagcgagt tgttttgcaa gtgctgcatc
    32161 ttccccgttg acacttttat ttaattgatc aattccttgt tgtaaatcgt tcatgccttg
    32221 tttcaattgg gcaattttgc cttgtttatc agttaaatta ccgtctaatt ctttaagtcc
    32281 tgctgaaagt ttgttacttc catcgactag tgaatctaag ccagttgcta agcttttttg
    32341 gccgttattt agttgtgtta tgcccgatgc tagagttggt acactgccat tcatcttatt
    32401 taatccatct gaaagtgcag tagaaccagt gtaagcttgg ttaattccgc ctgctagtgt
    32461 atctacacca gatgtatagg tagaaactcc gctagctaat ttcgttgccc cgccgtcaag
    32521 cgctgctaca ccgtctttta gtggtcctac tccagctgca agtgtcgaaa caccatcatt
    32581 taatttatcc ccaccagcgg ccgcagtgtt tacaccatct gtgtaagttt tcaagccaac
    32641 ttctaacgta ttagcgccat ctttgaacgt taaagagcta tctgcgagcg tttttaaatt
    32701 agtagaaatc gttttattac cttcttgtga tttcacaagg ccatctttaa tttttccaga
    32761 gccatctgca gcttgggcga acccttcacc agactcttta attttatcaa aaattgcttc
    32821 cgcgtatgat tttgttactt cagcggaaac ctcgcttttc agttgtttgg ctccttgttc
    32881 actcacgact tgacctaaat agttcagcga gccgtttgtt ttataggata attccatttt
    32941 tttcggatct ttatctaaaa cggatgctgc atttttagag aaatcttttg gaatcgtgac
    33001 aatcatataa tatttgccat cttttaagcc ttgttccgca tcttctttgg aaagaaaatt
    33061 ccaatcaagt tctttgttgc ttttcagttt tgtgactaac tgatcaccaa catccattgt
    33121 ttggccgtta taatcaaccg gtttatcatt gttaactacc gctactggta aatcccctgt
    33181 tttgccgtac ggatcccaga cggattttaa gaaaaagctt gcatataaaa gtggaataaa
    33241 cagaataact acaaatgata aaagtagtat tttgttttta aataatttct tccactcatt
    33301 ttttaccata tccattttat taccgcactt ctttctttta aagatttatt acgcttcgtt
    33361 ccaatctatg atagtggttc gttctttccc aataacttgc tctactaaaa cagataattt
    33421 ttgtgagtat aaataattag cgtattcttt atcagcgttt ctaaaagcac ttgtaatggt
    33481 gtgaataccg gactctgcaa attcatgata gtcagagaaa acagtgtgga ttaagtcgga
    33541 atctgggtat gtatcgattt tcccttccac tgcttctaca atatccagca aattaatttc
    33601 ttcagggtct ttagcaagcg tgaaaccacc gttattaccc gaaactgaat taatcagccc
    33661 gctaacgact agcttcctca aaattttact aatataagac ggcgacgaat cacgcaaacg
    33721 gtgatgaata gttacggaag aaatgggaac atctaccttc tgggtgtaca acatcgtcat
    33781 aatacaaaat acctgatcca tacttttgct caacttcata ataaaaatcc tccctcttcc
    33841 cattattacc tttcaatatc cttaatggac atttaacatc tatatacaat acacccattt
    33901 tttttaaagt gcaagagttt tttactaaaa atggaaaaaa ttttaatgaa tgcgtttgcc
    33961 gtgaataaaa caacctcaag tactgtctca aaaattttcc ttagccaaga aaaaaactgg
    34021 aataattttc gaaaacaaac gtgctaatct tatacatgtt ccaacaaaca atgacttagg
    34081 aggtgctttt ctcgtgttaa ctgatgatgt tccaaaaaaa tcacatttac cattaattaa
    34141 gcatcattct aattacttat agcttcgttt agttgtattt tcgcaaacaa aaaattggga
    34201 ggtactacac aatgtctaaa caagcaaagt ctttaacctt attcggattt ttcgccatta
    34261 cggcttcgat ggttatgaca gtttatgaat atccaacatt tgccacttcc ggctttcatc
    34321 tcgtattttt cttgctactt ggcggatttt tatggttctt acctgtcgct ttatgtgcag
    34381 cagaaatggc gacagttgat ggctggcaag aaggcggtat tttttcttgg gtgggaaata
    34441 cactcgggga acgttttggt tttgccgcaa tcttctttca gtggtttcaa ataacggtcg
    34501 gattcgtgac aatgatttac tttattcttg gcgcgctatc gtatgtattt gattttcccg
    34561 cgctcgaatc gaaccctttt attaaattta tcggtgtttt aatcattttc tggggactta
    34621 ctttttctca actaggtggt acgaaaaaca cggctaaaat cgcaaaattt ggttttatta
    34681 tcggtattct catcccagca atcattttat ttatcctagg tattgcttat gttgctggcg
    34741 gaaatcccct tcatgtcgct ttttccaaag aggcgtttat cccggatttc tcaaaagctt
    34801 caacattagt catcttcgtg tcatttatac tcgcttacat gggtgttgaa gcttccgcga
    34861 gccacgtaaa tgaaatgacc aatccaaaac gcgattatcc actagcgatg attatgctcg
    34921 ttattttagc gatcgcactg aatacaatcg gcggcctaac catttccgct gtgttacctt
    34981 taaaagattt atcccttagc tccggtgtcg tccaaacatt ccaagcgcta attctgcact
    35041 ttggttccgg cttaggatgg gcagtaaaac tgattgccat catgattgca cttggcgtca
    35101 tgggtgaagt cagtgcctgg gtagtcggcc cctcacgcgg aatgtatact gcagcagaac
    35161 aaggcttact tccagaaaaa atgaaaaaag taaataaaca cggtgtccct gttccactta
    35221 ttatggttca aggcgtcgtc gttaccattt gggcagctat tctcacattc ggcggcggcg
    35281 gaaataattt atcattccta actgccattt ccttaaccgt agtcatttat ttagtcggct
    35341 atttactctt tttcatcggc tacttagtac ttattttcaa aaaatcaagc ttaaaacgca
    35401 cctatcaaat ccctggtggc aaaattgtta aagtgattgt agcgctaatc ggcttagtaa
    35461 catccgtttt cgctttatgt atctcttttg ttccaccagc atccatcgcc gcaaaaagcg
    35521 acacgacata catggttatc ttatcaatca gctttatcgt caccgtacta attccattta
    35581 tcatctacgc tgtgcacgat aaaaaagaca tctcaccgaa agatattaca catttagaat
    35641 caagcgacat caataaattc acccacccaa gagctcgtgg cgaacacatt attaaccccg
    35701 acgaaaaaca tattatgaat caagacaaat tataggagga aaaaatcatg ttatatagta
    35761 aagaaaataa agaaagttat ttagaaccag ttttcggatc aagtgcagag gatcgtgata
    35821 ttcctaaata caccctcgga aaagaaccac tcgaacctcg gattgcctat cgtttagtaa
    35881 aagacgaact tttagatgaa ggttctgccc gtcaaaactt agctactttt tgccaaacat
    35941 atatggaaga cgaagcaacc aaattaatgt ccgaaacact agaaaaaaat gcaatcgata
    36001 aatctgagta cccaagaaca gctgaactag aaaatcgttg cgtcaatatt atcgctgact
    36061 tatggcatgc acctaagaac caaaaattca tgggaacttc cacaatcggc tctagtgaag
    36121 cgtgtatgct gggcggaatg gcaatgaaat ttgcttggag aaaacgtgcg gaaaaacttg
    36181 gcttagatat ttatgcgcaa aaaccaaacc tcgttatctc ctctggctac caagtgtgct
    36241 gggaaaaatt ctgtgtctac tgggatatcg atatgcgcgt tgttccaatg gataaagacc
    36301 acatgcaact gaataccgac caagtccttg attacgtcga cgaatataca atcggcgttg
    36361 tcggcatcct cggcatcact tacacaggcc gctacgatga catctacgca cttaacgaaa
    36421 aattagaaga atacaatagc aaaacagatt ataaagtcta cattcacgtt gacgcagcta
    36481 gtggtggctt cttcacacca tttgtcgaac ccgatatcat ctgggacttc cgcttgaaaa
    36541 acgttatctc cattaatact tctggtcaca aatacggcct cgtttatcct ggtatcggtt
    36601 gggtcctttg gaaagatgaa agctacctac cagaagaact tatttttaaa gtcagctacc
    36661 ttggcggaga aatgccaacc atgcaaatca atttctcccg cagtgcgagc cacatcatcg
    36721 gtcaatacta caatttctta cgctacggct tcgaaggcta ccgcaccatt catcaaaaaa
    36781 caagcgatgt agcacaatac cttgcccatg cagtcgaaca aaccggctac tttgacattt
    36841 ataacgacgg ctcccattta ccaatcgtct gctataaatt aaaagacgac gctaacgtaa
    36901 aatggacatt atatgattta gcggaccgcc tccaaatgcg cggctggcaa gttcccgcat
    36961 acccactacc aaaaaactta gaaaacatca tcatccaacg ttacgtctgc cgcgctgacc
    37021 tcggtttcaa catggcagaa gaattcatcc aagatttcca agcctctatt caagaactaa
    37081 acaacgctca catcctcttc catgataccc aacaatccgg cgtccacggc ttcacacatt
    37141 aataaaaagg ctagcctctc aaataggcta gccttttttc atgttctttt attctaagcg
    37201 actgaatcgc cctttctaca tctacaagat ctctgtcaaa aaaagccaaa gaaatcggaa
    37261 taatcatccc atctaccgct tccttcaatt ccatttcaca gttcggatgg caaagcacaa
    37321 tcgttggctc acttgactcc gttaaaacct ggttcaactc ctccactgaa ttaaacatcg
    37381 tctcatgcac cgtcaccttc cgccccagct cctgctccac ctgaaactta cacgactcga
    37441 aattaattaa attaaaggaa aaaatacaaa tttgcaccgg attgttccat ttataaatca
    37501 gtggatacaa atgaatcgtc aaataattaa tgtgcgaatc aattaataat actcgatatt
    37561 cactagcctc attccagcgc tccaaaacat ttttcacaac catataaagt ggctcatact
    37621 ttttatccag taatcgctca ttactcggaa taagtccctg caaattaaac aacgtcttct
    37681 tcaaaaagta acaaagtgcc gcccgaaaaa gcgaatgatt aacaacctcc ggaccaaaat
    37741 attcctcaaa taaatcaatc aaaacttgta aatccgcatt tttcattatc aactcattaa
    37801 actgctccaa ctccaccttt ttcatggaag catcaatgat actaaaatta gtcgaataat
    37861 aaatcagcat taaatacaag taatcattat atgaaaattc ctgaccaagc tctttttcaa
    37921 gtgtttcctt actacttttc cgaaccatag caagaaagct tgaagactca atatattttt
    37981 gacactgttc atccaatata attgcactag tcggaatatc cctcttaaac gccatcgaaa
    38041 tcagcgaccg aaaatacgca tgaccttccg cattatgcgc caacgtatca atattaatcc
    38101 gcaaattcaa cgtcgccata aagtcatcaa tcatttgctt ctcctcatcc aaaagtggat
    38161 aaataagcac accatattct gcttgaagaa gcgcaatcaa ataccgaacc cggtactcct
    38221 tcccagtaat tcgattatta tcaagtgtca aatcaatttc tcgaagaaac gcctctacct
    38281 tgtgcttcaa ccgatacgca tgcgaatgag aaataaaata cgtatccata aaatctgtga
    38341 atttgcgctc ctccacattc gtaacaaaaa acgccacaca tttcaaaaac atcgagttat
    38401 catataactt atacaaaact ttccgttccg tcgccccatt ttgcaaccga cattggtata
    38461 cccaattatc cacacattct ttcatctgaa taacaatcaa gccatccaat tcctcattca
    38521 acgcatgaat atccgacctt accgtcaccc gagaagtctc catatattcc gcaatttcat
    38581 ctaaattcgt atgtttattc tttagtagaa aatcacaaat caaacatttt ctcttaatat
    38641 ccttttcgat ataatttgta agcataacta tcctctccgt gaaagattaa tacacaaca
//
LOCUS       DASDYO010000006        36410 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.006, whole genome shotgun sequence.
ACCESSION   DASDYO010000006 DASDYO010000000
VERSION     DASDYO010000006.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 36410)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 36410)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..36410
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.006"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1640
                     /locus_tag="U0290_000317"
     CDS             <1..1640
                     /locus_tag="U0290_000317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2300385.1"
                     /translation="IDSLNTLRGLTIAYADNNNITDLSNLKDFFEGMDVVGDYKGLQV
                     NNQTITLPTINIKEGGTAISNNPTLDIDGEKMPVSSISDGGTVSTDNKTVSFTNLPVG
                     NKTVTYKATFTATSTKGVPLSYSIKVSQPINVSAQSDSTVNVFYKDENGDELAPSETI
                     SGKSGENYQTIEKTITNYTLKEIEGQPSGQFGDSDATVTYVYEKADGAPVIVKYVDAD
                     GNELATSDTLNGKIDAPYQSTAKSITGWAVKTTPTNATGVFTNANQTVTYVYEKADGA
                     PVTVKYVDADGNELATSDTLNGKIDAPYQTTAKSLSGWAVKTTPANATGVFTNANQTV
                     TYVYEKADGAPVTVKYVDADGNELATSDTLNGKIDAPYQTTAKSLSGWTVKTTPANAT
                     GVFTNANQTVTYVYEKADGAPVTVKYVDADGNELATPDTLNGKLDTSYAATAKNLSGW
                     KLTATPANANGVFTTDAQTVTFVYAKQEDNPKKEDKNKTPIKISENKPTASKVTRIKK
                     QTKLPKTGDNQQDSILFGLIGTCFVLLGIYSISKKNS"
     gene            1813..2049
                     /locus_tag="U0290_000318"
     CDS             1813..2049
                     /locus_tag="U0290_000318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NifU family protein"
                     /protein_id="HEM2300386.1"
                     /translation="MEEISYAEVDKALKKFRPFLVRDGGDYELIEVTQDGVVKIKLLG
                     ACETCPSSDMTLKMGIELTLAEKIIGFKEVVQVF"
     gene            2162..2662
                     /locus_tag="U0290_000319"
     CDS             2162..2662
                     /locus_tag="U0290_000319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylglycerophosphatase A"
                     /protein_id="HEM2300387.1"
                     /translation="MVEKQSALESKARSWLIERGVEIDDIAELVLFLQQKYHPGLELD
                     ICRQNVEHVLRKREVQNAVLTGIQLDVMAEKGELVQPLQNIISADEGLYGVDEILALS
                     IVNVYGSIGFTNYGYIDKVKPGILAKLNEHDGIAVHTFLDDIVGAIAAAAASRLAHSY
                     HDDIVN"
     gene            complement(2687..3997)
                     /locus_tag="U0290_000320"
     CDS             complement(2687..3997)
                     /locus_tag="U0290_000320"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEM2300388.1"
                     /translation="MDIFNDFFVIFLIAATAFFVASEFAIVAIRKPTVLQLVASEDPR
                     AKYVKKVTSNMNDYLAACQLGNTLAALAMGWVGEATMRGWLEPLFLMLPVPESVEKPI
                     SIFVSFILITFLNVVLGELAPKTFTIQSTEKVALFIARPLVYWYRLTFPLNWLLNNSA
                     NLITRMFGVKQTVDADQMTPTELKIIFEDSYRQGLLNPQEFRYMKNIFKLGDVPAKEV
                     MIPRMSMIAIDQTATVRDLLKLTSEHTYHIFPVTEDEDKDHIIGMLRVSAVMAGLGKD
                     ETIVTQSIQPFITPVLEVFEGMILEELLVKMQQESEPFVVLTDEYGGTSGIVTLEDVM
                     EVIVGDMEEAKGPKGIRKVALNHYIIEGSEPLLEVEEALGVPIEGPGVHTLSGWMLLE
                     RFDLEAGDEIEHEGYRFIVRSMNKNSIRQVEVKLGKEKPVKLEE"
     gene            complement(4033..4476)
                     /locus_tag="U0290_000321"
     CDS             complement(4033..4476)
                     /locus_tag="U0290_000321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2300389.1"
                     /translation="MVSIQKLTKDNFHETAKLEVHPHQKTFVAENWYSIIEASFEETY
                     HSLVIYAENIPVGYAMYGMDTDDGEFWLVRFMTGKEHQGKGYGGDALEQIIEIVKNLP
                     EKPARLRLSYEPDNTVAEKFYAKYGFEKTGEIIDGEAVADLWFKR"
     gene            complement(4525..5292)
                     /locus_tag="U0290_000322"
     CDS             complement(4525..5292)
                     /locus_tag="U0290_000322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01457 family HAD-type hydrolase"
                     /protein_id="HEM2300390.1"
                     /translation="MKNYKAYLIDLDGTMYRGAEVISEAIIFIENLKRAGIPYLFVTN
                     NSTKTPGQVAEHLTDMGIQAVSEDVFTTSQATVQFMIEQKREKSVYVIGERGIKQELT
                     DNGFEITSSNPAFVVVGLDREVNYEKFSKAALAVRGGAMFISTNGDAAIPTERGLLPG
                     NGSITSVVSVATETAPVFIGKPESIIMEQALAKLGVHKDEAIMVGDNYETDIMAGINY
                     GMDTLIVHTGFTSKEALLTKEIQPTYAVTKLTDWKFN"
     gene            complement(5312..5587)
                     /locus_tag="U0290_000323"
     CDS             complement(5312..5587)
                     /locus_tag="U0290_000323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YutD family protein"
                     /protein_id="HEM2300391.1"
                     /translation="MTITIQDLNYEIITNYRDAFDEEKLNERFSDILGRYDYIVGDWG
                     YDQLRLKGFFEDDNRKAAYDNKISTLKEYIYEYCNFGCAYFVIKKVK"
     gene            complement(5584..6972)
                     /locus_tag="U0290_000324"
     CDS             complement(5584..6972)
                     /locus_tag="U0290_000324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009924752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional metallophosphatase/5'-nucleotidase"
                     /protein_id="HEM2300392.1"
                     /translation="MKHLTLWHTNDVHSHLEHWPRIFNFLKEKRTAADKENQSALFFD
                     IGDFLDRVHPLTEGTNGLANTDLLNQLPYDAVTFGNNEGTTLAHEDLDKLYEHAAFPV
                     VCCNFYANKECTKQSDWVKSIVYKEVEQVKIAIIGATAPFREYYEAMGWGVEEPISAI
                     KKQIAGLDANTDVVILLSHLGLPTDERIALELPEIDIILGGHTHHLLENGKIEGNALL
                     AAAGRWGEHVGKVTIELDENNQIISKKAVTFATEKLPIPPNETAEIQAFFDKGREELS
                     EKVVAIPRKLAHNWFDDSEIAHILNEAVCEWTGAETFVMNAGIFMTDFEAGIVTEFDI
                     HQMLPHPLNAIALTMSGEELEILIDGIYRKKAELQDIPLRGFGFRGEYFGTVLMDRAG
                     FDAENQVALFDNKPIDKTREYRIATHDTFVFAPFFPIVKQIKRKEVYTPELLRDILKW
                     KLKKMYGQEEDK"
     gene            7108..7947
                     /locus_tag="U0290_000325"
     CDS             7108..7947
                     /locus_tag="U0290_000325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEM2300393.1"
                     /translation="MDITQTVEILLISVFAGVVGSLLGLGGGIIVTPALTLIFGIDIQ
                     YAIGASIISVIATSSGSAIAYIKDGITNLRVGMFLEIATTIGAITGAFVSGLLSATAL
                     YIIFGLLLLYSAFNMIKKVGTEFPTNVKPDPLATKLNLHDSYYDKSLRQTVDYQVANV
                     PAGFGVMYGAGIASGLLGIGSGAFKVMALDVFMKMPLKVSSATSNLMMGVTAAASATV
                     YLFQGDIQPAIAAPVAIGVLVGATLGTRIMQRLKSKVIRIIFIPVILYVAFQMILEGL
                     GWI"
     gene            7948..8313
                     /locus_tag="U0290_000326"
     CDS             7948..8313
                     /locus_tag="U0290_000326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1634 domain-containing protein"
                     /protein_id="HEM2300394.1"
                     /translation="MAEKKEEMYRVELIVSALLRIGVVLSAIIIVFGLVMLFITGESG
                     YPGETYPTSLTAIFSGLGTLKPYAIMMFGLFCLILTPVLRVVVSLFTFLKEKDYLYVG
                     ITGIVLIILVISFLIGIKA"
     gene            complement(8346..9188)
                     /locus_tag="U0290_000327"
     CDS             complement(8346..9188)
                     /locus_tag="U0290_000327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF72 domain-containing protein"
                     /protein_id="HEM2300395.1"
                     /translation="MVTIGLTGWSDHDSLLQSKKLTLADYAAHFPVVEVDTSFYAIPS
                     PRTTANWAAQTPDEFRFVIKAFSAMTKHKEWSQYFDSENAMYTAYMDMIAPISETGKL
                     QAILFQFPPYFNCTKENVTYLKYIASKMGDLPVAIEFRNSSWYNEQNTEKTLELLREL
                     GFIHTVVDEPQVGSGSVPIVLRETNSDMTLVRLHGRNQYGWMKANSPEWREVRTLYRY
                     NEEEINEWAKYVEHLQKLSKEVVVIFNNNSGGDAADNAKHLQKALQVEFQGLAPMQMD
                     LFSE"
     gene            complement(9330..9644)
                     /locus_tag="U0290_000328"
     CDS             complement(9330..9644)
                     /locus_tag="U0290_000328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300396.1"
                     /translation="MTEIKYLEGMYQDPFFPPFLVDKIKQCIFDTVQFLEQGNHDTEA
                     IQAKFDEMTLAINALQDEFYENESELETGARDSIAETIIPILAHYKIDIDIEELLRER
                     EW"
     gene            complement(9779..11173)
                     /gene="sufB"
                     /locus_tag="U0290_000329"
     CDS             complement(9779..11173)
                     /gene="sufB"
                     /locus_tag="U0290_000329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufB"
                     /protein_id="HEM2300397.1"
                     /translation="MTEIPEIGEYQYGFHDKDTSVFRTERGLTEKVVREISNIKEEPE
                     WMLEFRLKSLEQFYKMPMPTWGGDLSELKFEDITYYVKPSEQTVRSWDEVPEEIKRTF
                     DKLGIPEAEQKYLAGASAQYESEVVYHNMKQDLEDLGIVFKDTDSALKENEDIFKEYF
                     AKVIPPSDNKFAALNSAVWSGGSFIYVPPGIKVDTPLQAYFRINSENMGQFERTLIIV
                     DENASVNYVEGCTAPVYTTNSLHSAVVEIIVKPGAYCRYTTIQNWANNVYNLVTKRTF
                     CEENATMEWIDGNIGSKLTMKYPAVHLRGEGARGTTLSIAIAGKGQRQDAGAKMMHYA
                     PNTSSTIVSKSISKQGGNVTYRGIVHFGRNADGARSNIECDTLIMDNLSTSDTIPYNE
                     ILNSNISLEHEAKVSKVSEEQLFYLMSRGLSEEEATEMIVMGFIEPFTKELPMEYAVE
                     MNRLIKFEMEGSIG"
     gene            complement(11196..11639)
                     /locus_tag="U0290_000330"
     CDS             complement(11196..11639)
                     /locus_tag="U0290_000330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SUF system NifU family Fe-S cluster assembly
                     protein"
                     /protein_id="HEM2300398.1"
                     /translation="MTSRKLDQLYRQVIMDHYKNPRNNGELPDSDVTIDLNNPTCGDQ
                     IHLHLKMDGDKIVAAKFTGSGCSISMASASMMTQSIIGKTEKEALKMSREFSEMVQGH
                     DHETIDEYGDVEALAGVAKFPARIKCATLSWKAMERAIFEKEGTK"
     gene            complement(11636..12862)
                     /locus_tag="U0290_000331"
     CDS             complement(11636..12862)
                     /locus_tag="U0290_000331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM2300399.1"
                     /translation="MIDIQKIRADFPILAQEINEKPLAYLDNAATSQKPKQVIEALTH
                     YYEFDNANVHRGVHTLAARATDAYESARGKVAKFIHAREVAEIIFTRGTTSAINLVVD
                     SYAEANIEAGDEIVISYLEHHSNLIPWQQLAKRKGAVLKYIELEEDGTISVEQAKKTI
                     GEKTKIVALAHVSNVLGTITPMKEIAAIAHQFGAVILVDGAQAVPHMEVDVVDLDADF
                     YAFSGHKMMAPTGIGALYGKRELLDAMEPTEFGGEMIDFVELYDSTWKELPWKFEAGT
                     PIIGGAIALGAAIDYLAEVGLANIHAHEQALASYAIEEMSKIEGITIYGPKDASKRCG
                     LVTFNLEGAHPHDIATILDEDGIAIRAGHHCAQPLMKWLDVSSTARASFYIYNTKEEI
                     DALIDGLKLTKEYFGL"
     gene            complement(12863..14164)
                     /gene="sufD"
                     /locus_tag="U0290_000332"
     CDS             complement(12863..14164)
                     /gene="sufD"
                     /locus_tag="U0290_000332"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly protein SufD"
                     /protein_id="HEM2300400.1"
                     /translation="MAENMTIKDDFIHAFSSNANEPDWFLDIRRNAFKAYGELDLPFV
                     DKTKITRWNFTKFETFIPFKEGVTNETLPEKVANLVDLDNKEANFYVQMDERPARLQL
                     QQELVDQGVIFTDIISAVKNHPELVKKYFMKDAVQVNEHKLTAFHAALVNGGIFLYVP
                     KNVEVKAPIQAVFVQDKAESPLVNHVLLVADDNSAVTYVENYVTVDNAPKGIVSIVEE
                     VIAEKNARITFGGVDNLASDVTTYVNRRGHIGTDSQIEWALGLMNDGDTINENVTNLM
                     GDGSSADVKTVTVGRGKQTQNVTTRVTHYGKASNGTILSHGVMKERATTIFNGIGHIK
                     HGASKSDAQQESRVLMLSPEARGDANPILLIDENDVVAGHAASVGRVDPLQLFYLMSR
                     GISQKEAERLVIHGFLDPVVRQLPIESVKTMLREVIEGKVR"
     gene            complement(14183..14968)
                     /gene="sufC"
                     /locus_tag="U0290_000333"
     CDS             complement(14183..14968)
                     /gene="sufC"
                     /locus_tag="U0290_000333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Fe-S cluster assembly ATPase SufC"
                     /protein_id="HEM2300401.1"
                     /translation="MATLKIQDLHVEIEGKEILKGVNLEISTGEIHAIMGPNGTGKST
                     LSSAIMGHPKYEVTQGTITLDGEDVLEMEVDERARAGLFLAMQYPSEISGVTNAEFIR
                     AAINSRREEGDEIPVMQFIRKLDAKMDILDMDEEMAERYLNEGFSGGEKKRNEILQLL
                     MIEPKLAILDEIDSGLDIDALKVVSKGVNEMRGEGFGCLIITHYQRLLNYITPDFVHV
                     MMQGKVVKEGGPELAKRLEAEGYDWIKQELGIELEEEEAVDQQ"
     gene            15308..16384
                     /locus_tag="U0290_000334"
     CDS             15308..16384
                     /locus_tag="U0290_000334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300402.1"
                     /translation="MKKAIMAATIFVLLLATLSGCSSPKSDFTAALQKTAENRQYTTN
                     VTFQVNNLSESYIKKLGPEIDLNQLKKSNIQYKISVDSDSASSYSASSIHWKGKKPLD
                     LTIHALQNSDDGKAYIPVSDFYDASDSISSLLPDSAARIFNQVLDQNKDLESKYLNLF
                     ETIQNFSNQTIDTETVDRQAKVLKKMEETAGIAIYSYLNDLDDQHFTSKDNGDIVLKL
                     SKNEISDLVNSVITKLDDNGSVVALIGEIDGSTQKAAKKKWNNAQKSIQSSLKALTEN
                     KAQTLDFKLTLTPDSKKGFSKAIITTNFEDTKTKDLMDFTTTIDMLDYEKVPPMPKGK
                     EIVSKKELDKAISDGLKLYLSSAQ"
     gene            complement(16426..17256)
                     /locus_tag="U0290_000335"
     CDS             complement(16426..17256)
                     /locus_tag="U0290_000335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM2300403.1"
                     /translation="MKKVLGFIFTLSLVLVLTACGGSSDKASSSKDDNQLVVGASNTP
                     HAQILEQAKPILKDKGIDLKIVKYTDYVMPNKALEEGDLDANYFQHKPYLELEEKEKG
                     YKFADVGAIHIEPMGIYSKKVKDIKDLKDGAQVLLSNSKSDWPRVIGIFVDNGLLTLK
                     DGVKPQDATFDDIKDNPKNLKFKYDFDPAYLMTAYNNEEGDVVAINSNFVVDQGLNPS
                     KDAIAIESKDSPYANIVVTTEKKKDDKNIKELVKVLHSKEIQDYITKEWDGAVVPVDK
                     "
     gene            complement(17321..17995)
                     /locus_tag="U0290_000336"
     CDS             complement(17321..17995)
                     /locus_tag="U0290_000336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2300404.1"
                     /translation="MTKLQELFPNVDFQMMWVATQETLYMTLVSLFAVFLLGIVLGLL
                     LFLTNNKKHAGARILYWITAILVNVFRSIPFIILIVLLLPMTKSLVGTVIGPKAALPA
                     LIISAAPFYGRMVEIAFREVDKGVIEAAKSMGANMFTIIGKVLIPEALPAIISGITVT
                     AISLVGFTAMAGVIGAGGLGNTAYLEGFQRGQPDVTVLATIIILIIVFIFQFIGDFLT
                     KRTDKR"
     gene            complement(17992..19014)
                     /locus_tag="U0290_000337"
     CDS             complement(17992..19014)
                     /locus_tag="U0290_000337"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEM2300405.1"
                     /translation="MITLQNVVKEYTSRNNKVLAVDHVDLEIEQGEIFGVVGYSGAGK
                     STLIRMFNGLELPSAGTVEVDNLLISQIRGSKLRKARQQIGMIFQHFNLLWSRTVAEN
                     IAFPLEIAGVRGEKRRFRVNELIRLVGLEGKENAYPSELSGGQKQRVGIARALANNPK
                     VLLCDEATSALDPQTTDEVLELLLDINKRLHLTIIVITHEMHVIRKICNRVAVMENGK
                     VVELGDVLDVFRHPQEKVTQRFVRQVTDSDETEELIHLLLDNYAEGKIVKLLFMSENA
                     TQPVISQVAKENDVMLNVLHGNLTQTQNGAYGTLYVQVLGTEDAINASLTQLRQLKVE
                     TEVLER"
     regulatory      complement(19104..19222)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(19331..19519)
                     /locus_tag="U0290_000338"
     CDS             complement(19331..19519)
                     /locus_tag="U0290_000338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300406.1"
                     /translation="MKKHIVLIVVACITVIAVFMYIVQINNSELKYQNRAQIKIASQM
                     ASQNEQTDNSIISEITYK"
     gene            complement(19598..20740)
                     /locus_tag="U0290_000339"
     CDS             complement(19598..20740)
                     /locus_tag="U0290_000339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM2300407.1"
                     /translation="MKSKLELLFTKISHVMNVWQATFFAAVSWILALITIQTIYLWSI
                     SIRDDSLFLREVSQAIVQLFGTNKYTRIMQSFWMMSLKFLIIFLIACLFFAFFYRLMR
                     QRILKKQLRTINFALNDGKPVDTESFVPEIQELERNIENMRERQKKLMQQEEQAQQAR
                     NDLITNVSHDLRTPLTSILGYLSYIHEDRYRDEIELRYYTELVYGKARHLHKLIDDLF
                     SYTRLDSVDYQLKKDELDIIELLRQLVAEYDGRAAERNMQIVEHFDANKLIIGGDGNQ
                     IMRLFENLFSNALRYGEGNKQIDVSAKKEDNMAVVRVTNYGEEIPNVDLPYLFERFYK
                     VDKNRTTTGTGLGLAIAKSIVEKHGGIVTAESKKRQTSFIVKLPLI"
     gene            complement(20730..21425)
                     /locus_tag="U0290_000340"
     CDS             complement(20730..21425)
                     /locus_tag="U0290_000340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2300408.1"
                     /translation="MTTSILIADDDKEIVDLVKLYLQNEGYTIYQAYDGAEVWRLVQE
                     KQPTLVILDIMMPEMNGLEVCRLMRDNGILTPILMLSAKAEDNDKIMGLLTGADDYMV
                     KPFNPLELSVRVKAILRRMQQMSQAEPVSQDKVIIGPIVVDRGLHVVTVSGKELHLTT
                     SEFDILFLLASEPGRVFSSEYIFEKIWQEKALGASKTVMVHISNLRDKLREAMGGENV
                     IKTIWGVGYKIEI"
     gene            complement(21500..22375)
                     /locus_tag="U0290_000341"
     CDS             complement(21500..22375)
                     /locus_tag="U0290_000341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM2300409.1"
                     /translation="MNHSNLTILSVCSNFVIVVLKLIVGFFTGSVAVISEGIHSSMDL
                     FASIITFFSIRISNQPADEDHPYGHGKAENIAGTIETLLIFVAGIWIIVESVNKLVNP
                     HEIRFPALGIMVMLFGAIVNIIVSRIIKKAADEANSVAMKSNALHLYTDVFTSLGIAL
                     SLFLVYITGWLWLDPVIAILTAFYIMYEAYKLLKESFPPLMDKRLSADEEEAIKQIIL
                     AHKARFIEFHDFRSRRAGAEEYIDFHLVVSSSMTIESAHSLCDEIEAEIMNFYAKAEV
                     LIHLEPEEERVLTRI"
     gene            complement(22567..22851)
                     /locus_tag="U0290_000342"
     CDS             complement(22567..22851)
                     /locus_tag="U0290_000342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM2300410.1"
                     /translation="MRTAQKNGEDFVVFFFTPMCGSCQIASRLVDVVLESDEVHTEVV
                     KVDLNYVPDIAQNLEITSVPALVKFKNGQPADLSYQLHDATAIFEFLYSE"
     gene            complement(22936..23313)
                     /gene="gcvH"
                     /locus_tag="U0290_000343"
     CDS             complement(22936..23313)
                     /gene="gcvH"
                     /locus_tag="U0290_000343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system protein GcvH"
                     /protein_id="HEM2300411.1"
                     /translation="MSLPKDLLYTEEHEWVKADEGSYVIGITDFAQDQLGDIVFVELP
                     EVGDTVAKGDSIGSIESVKTVSDFYAPVTGKVVAVNETLEDEPELINSNPYDTGWILK
                     LEEVEEADVKALLSSDDYEKVLD"
     gene            complement(23354..23707)
                     /locus_tag="U0290_000344"
     CDS             complement(23354..23707)
                     /locus_tag="U0290_000344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenate reductase family protein"
                     /protein_id="HEM2300412.1"
                     /translation="MINFYWYPKCSTCKKAKAWLENEHVDFNEVDIKTETPTAEEIQK
                     WHEVSGLPIRRFFNTSGIKYRELGLKDKLDTLSPEEAYKLLASDGMLIKRPLTTNGKE
                     VTLGFKEEEFEATWK"
     gene            complement(23864..25039)
                     /gene="rodA"
                     /locus_tag="U0290_000345"
     CDS             complement(23864..25039)
                     /gene="rodA"
                     /locus_tag="U0290_000345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEM2300413.1"
                     /translation="MNQQNKLAGRIDYGIVLSMMLLMIISLVSIYSAQLTNNQYDANF
                     VVKQAMWFVVSTFAIIVVMQLDYDRLTKWAYYFYGLGLFLLVFVLLFGKEVKGAKSWI
                     VIPFLGNIQPSEVVKVILIVVLAKVIWDHNRTYKVHRFSYDAWLLLKIGLFTLMPLIL
                     IMLQPDLGTALVFIAIMSGMILISGITWKIIVPLFGSIAAIGTALIWMVIYHQNWLTS
                     LGFKPYQFERITTWINPENDPQGGGYQVLRAMTAIGSGQISGNGAGYDAIAIPENHND
                     FIFTIVAGDYGFIGASILLAIYFLLIYQIIRVALDVGVPFYSYICTGVVMMLMFHVLE
                     NVGMNIGLLPITGIPLPFISYGGSALLGNMMAVGLVLGIRFNFKKSMFEVKEENHAS"
     gene            complement(25115..26284)
                     /gene="rodA"
                     /locus_tag="U0290_000346"
     CDS             complement(25115..26284)
                     /gene="rodA"
                     /locus_tag="U0290_000346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein RodA"
                     /protein_id="HEM2300414.1"
                     /translation="MARNRKKAVRIDYSIIFLMMLLCIIGLVAIYVAGLVNDQYTNNF
                     LLQQSIWIVISTGVVVVIVLFFDYDKLQWAAYYLYGIGNLLLVLVLIVGDERKGSKSW
                     ISIGSLGSLQPSELMKSFLILALAKVIWDHNKKYKLHTVSLDMQLLLKIGIVSILPLG
                     LVALQPDLGTILVFIAIIIGMVFISGVTWKILLPVFSSIALIGGTLIYLVMYNQEFLQ
                     KLGFKPYQFKRITSWLRPEEDPLGDGMQLLRSMQAIGSGQLQGNGIGNQAIAIPENHN
                     DFIFSIIGGNFGFIGGCVLIMLYFLLIYQIIRVALDINIPFYSYICTGVCSMILFHVL
                     ENIGMTIGLLPITGIPLLFVSYGGSSLLGAFMALGLVLSARYNAPEVNLGKENRF"
     gene            complement(26426..27217)
                     /locus_tag="U0290_000347"
     CDS             complement(26426..27217)
                     /locus_tag="U0290_000347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300415.1"
                     /translation="MKSALELKNVSFSRKRDFEMKNVSASIPEGKITTLIGPNGSGKS
                     TMLRLMMRLLTPDSGEIFLNDKNITEIPSKDLAKKMTMLSQAPEGLVDVMVHDLVAYG
                     RLPHRSWLSTLQEEDEAVIHWAIKVCNLEELAYRPLHSLSGGERQRAWLAMALAQKTP
                     ILLLDEPTTYLDIAHQLELLDLLVHLNKEYNLTIVLVLHDLNQAAIYSDHVFVCENGQ
                     LVKDGSPTEVFTTELLREVFHITADITEKDGKQHIHPLASTRFEY"
     gene            complement(27214..28224)
                     /locus_tag="U0290_000348"
     CDS             complement(27214..28224)
                     /locus_tag="U0290_000348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM2300416.1"
                     /translation="MTTVKAHDPRRKRRRITFIVVIILLILAFFYGLTTGSVKITYSD
                     AWQTLTGGGSDLANQLIWNLRLPRLLIAFLVGAALAIAGCLLQGVMRNPLADPGVIGV
                     SAGGGFVAILMTLAFPALASFVPIGAFLGAFGTAILIYLLAWDRGVSPLRVILSGVAI
                     NAFIGAMTSGVMVLYSNRVQSVISWMTGTLSGKSWYHLDMIWPYMLVGFVLSGFAIRS
                     SNVLLLGDDAAKLLGFSVERHRFFIIMLAAFLSGVAVSVAGLIGFVGLVVPHIFRLII
                     GNDYKYLLPLSALGGALLVGFADTAARSWFGSIELPVGILLAMIGAPFFLFLLQRGRV
                     AS"
     gene            complement(28224..29195)
                     /locus_tag="U0290_000349"
     CDS             complement(28224..29195)
                     /locus_tag="U0290_000349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2300417.1"
                     /translation="MKKITILTLSITAALLLASCGNDTATDTNNETTKTENKSQAALT
                     ITDMAGRDVSFDKKPERIIALTNADMNIIYALGGTVVGRQTTDASGVPDGAKKATEVG
                     NTHDLNLEKIASLGADAIVASSEQNLKDVPAMEGVGPKVVLTGANSIDEIKKQTAVLG
                     ELLGKETKAKELEANIDQKVAEVKKKQQGKKVRSLLVLGAPGSNYAALPSSLSGNVLE
                     IAGGENVAKDFKGVENFPQYASMNVEKIVAADPEVIFLMIHGGDEKETEAAFKKEMKQ
                     NEAWNSTSAVKNDHIVVLPAELFGTNPGIKIDQALDYMTDEINKVDN"
     gene            29351..29515
                     /locus_tag="U0290_000350"
     CDS             29351..29515
                     /locus_tag="U0290_000350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300418.1"
                     /translation="MTDNLFPNLAHENCKETMPPVTTEQFKEAAILEKNRKLEEILNI
                     VDKKKPSIKK"
     gene            29648..30406
                     /locus_tag="U0290_000351"
     CDS             29648..30406
                     /locus_tag="U0290_000351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HEM2300419.1"
                     /translation="MAILELNFKSVCLAMQTSVTVILPETDALYHGSIPKYKTLYILH
                     GLSNNHTTYVRNTNIERYATEKGLAVVMPAADHSFYSNMVHGRDFFEFVSTELPHVMK
                     NWFPLSDKKEDTFIAGHSMGGYGAFKVALTFPEKFQAAASMSGVMDINYIIKEDCFEN
                     FSTRAITGEMASQTGTENDLFHLLETNLQNQVPLPALFQNCGTEDFLYEDNLRFRDFA
                     LEKNAPLEYREGPGDHDWDFWDKSIKEIIDWLPL"
     gene            complement(30446..31849)
                     /locus_tag="U0290_000352"
     CDS             complement(30446..31849)
                     /locus_tag="U0290_000352"
                     /EC_number="4.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate decarboxylase"
                     /protein_id="HEM2300420.1"
                     /translation="MLYSEDDKRKQESYRIPLFGSEEESTSIPKYVLKKEPMEPRIAY
                     QLVKDQLMDEGNARQNLATFCQTYMEKEAEILMAETLEKNAIDKSEYPQTAELENRCV
                     NILADLWNAPKDMSYLGTSTVGSSEACMLGGLAMKFRWRNHAEKRGLDIQAKRPNLII
                     SSGYQVCWEKFCVYWDVDMRVVPMDKEHLSIDVDKVFDLVDEYTIGIVGILGITYTGK
                     FDDIQLLDEKVEAYNEANEHQLVIHVDGASGAMFTPFVNPELPWDFRLKNVVSINTSG
                     HKYGLVYPGVGWILWKDKEYLPKELIFEVSYLGGSMPTMAINFSRSASQIIGQYYNFL
                     RYGFEGYREIHEKTKKTALYLAKSVEKSGYFEIINDGANLPIVCYKMKEGLDVEWTLY
                     DLADQLLMKGWQVPAYPLPADLSDTIIQRFVCRADLGYNVAEEFAVDFADALHNLEHA
                     RVLYHDKERNDSYGFTH"
     gene            31976..32284
                     /locus_tag="U0290_000353"
     CDS             31976..32284
                     /locus_tag="U0290_000353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SdpI family protein"
                     /protein_id="HEM2300421.1"
                     /translation="MFDLIFPLLLIILGVIYRVNPPKNKESRFSYRTKASLKNEISWQ
                     KAHQSLGIYWIVIGVSLLVLSLVLAFIPMHAFIRSSILLTTSIFAVLLSVILVEKKLQ
                     "
     gene            complement(32345..33199)
                     /locus_tag="U0290_000354"
     CDS             complement(32345..33199)
                     /locus_tag="U0290_000354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HEM2300422.1"
                     /translation="MIIKKILNNNVVIAEGKSGKESVVMGRGLAFQKKLGDEVEVSKI
                     EKTFVMETHELSEKLSELLSEIPLKHLRVADDVVQYAQETLETDLSDNIYLTLTDHIN
                     FAVSRYNQGINLKNALLWEIKRFYHAEYLVGMKALDFIEQEVGIRLDEDEAGFIALHI
                     VNARQDGQQMHMTVAMTQIVQDILSIVTYHYGMVLDETSLNYTRFITHLQYFAQRLLR
                     KEIVDSGDDFLYEQVQIKYPEAFKCTKKIDAYLINTHHTELTRDERVYLTIHIYRVTE
                     RNTIIKEE"
     gene            33467..33877
                     /locus_tag="U0290_000355"
     CDS             33467..33877
                     /locus_tag="U0290_000355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2300423.1"
                     /translation="MATRSEQIFINLPVKDLQATVAFFTELGYEFNPQFTDENATQML
                     IGDNIFAMLLKEDFFQTFHKEGIADTTKAREVLITITQDSRQAVDTLVDHALKIGAKP
                     AGETQDYDFMYSRSFLDLDNHLWEIAYLDESALQ"
     gene            complement(33900..34412)
                     /locus_tag="U0290_000356"
     CDS             complement(33900..34412)
                     /locus_tag="U0290_000356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ClbS/DfsB family four-helix bundle protein"
                     /protein_id="HEM2300424.1"
                     /translation="MVRPKNKVELLQQSTEKYQQLNDLINSIPKEKQQLTFPFEDRDK
                     NIRDVVIHLHEWHKMALDWYEVGMGGKKPLMPAEGYTWKTTPELNLVIWQKYQETDLA
                     QARELLDETHNKEMVLIAGHSEEELFTKKYYKWTNTTSLGAIFISSTSSHYDWAIKKI
                     RKFKKAAGIK"
     gene            34536..34877
                     /locus_tag="U0290_000357"
     CDS             34536..34877
                     /locus_tag="U0290_000357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HEM2300425.1"
                     /translation="MKKIVILIISLLLLVGIGFGVYYFKNANHIGADVSYVKITTDGE
                     KGKNVSFNYSYTMPAYDEAGKETEVTFSADKNLRKGAYLKLYIKEDKGVTSYEEVPEK
                     EVPSKAAEKLK"
     gene            complement(34909..35292)
                     /locus_tag="U0290_000358"
     CDS             complement(34909..35292)
                     /locus_tag="U0290_000358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="effector binding domain-containing protein"
                     /protein_id="HEM2300426.1"
                     /translation="MILQENIEIFGKKIRVNNDNFSPIAELWGDVMVDKPAGDIFAVY
                     SNYASDYKGDYDLLVGTKDWDEEKSVLIKAGDYLVFSVDNASHKGVEETWQKIWARDS
                     ELKRAYKTDFEWYHTSGEIDIYISI"
     gene            complement(35348..36244)
                     /locus_tag="U0290_000359"
     CDS             complement(35348..36244)
                     /locus_tag="U0290_000359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HEM2300427.1"
                     /translation="MKLERILAILVMILERKVLASELAEKFEVSTRTIYRDMDTLLYA
                     GFPVVALPGKNGGFTMLDTYKLATFTFSEAEKQILLEALEARSEFMLNDSHEILREKI
                     TLLQTEKPTSKHIFFDSATQHRQQIEAEVKRKVAYIQKAFTTNKQLKITYIAMSGAET
                     TREISPQKLNLMDGSWYLEAYCHKRAAIRHFKLTRITSLKEIGKSIMYVEETEHQPAE
                     MKKIVLEFPKNQLGKLLDYFLQEEMETGDDYVRVSFFYDLERNIISFLLMFGSAVKIL
                     EPASLQKDYKSEVEKLYFNLNC"
     gene            complement(36288..>36410)
                     /locus_tag="U0290_000360"
     CDS             complement(36288..>36410)
                     /locus_tag="U0290_000360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEM2300428.1"
                     /translation="LAKRQGIDASGLPATSKTFAKYKGMMREVLSITYAWVFDH"
BASE COUNT        10898 a         8027 c         6101 g        11384 t
ORIGIN      
        1 ccattgattc tttaaataca ctaagaggat taactatagc ctatgctgat aataataaca
       61 ttactgattt gagtaattta aaagactttt ttgaaggcat ggatgtcgtt ggagattata
      121 aaggtttaca agttaacaac caaactatca cacttccaac tattaatatc aaagaaggtg
      181 gaacagctat ttcaaataac cctactttag atattgatgg cgaaaaaatg cctgtttcta
      241 gcatttctga tggcggaaca gtatctaccg ataataaaac cgtttctttt actaacttac
      301 cagttggaaa taagactgtt acttataaag caacattcac agctacctcc actaaaggag
      361 taccacttag ttattctatt aaagtatcgc aaccaattaa tgtatctgca caatccgatt
      421 caacagtaaa cgtattttac aaagatgaaa atggcgatga attagctcca agtgaaacaa
      481 tttctggtaa atccggagaa aattatcaaa caatagaaaa aacaattact aactacacat
      541 taaaagaaat tgaaggccag ccttcaggac aatttggcga tagtgatgca acagtcactt
      601 acgtttacga aaaagcggac ggcgctcctg ttatcgtgaa atatgtcgac gcggatggta
      661 acgaattagc tacttccgac acactgaacg gcaaaattga tgctccttat caatctacag
      721 ccaaaagcat cactggttgg gcagtcaaaa cgactccaac caacgcaacg ggcgtattca
      781 caaacgctaa ccaaacggtc acttatgtct atgaaaaagc agacggcgct cctgttaccg
      841 tgaaatatgt cgacgcggat ggcaacgaat tagctacttc cgacacactg aacggcaaaa
      901 ttgatgctcc ttatcaaact accgctaaaa gtctttctgg ttgggcagtc aaaacgactc
      961 ctgccaacgc aacgggcgta ttcacaaacg ctaaccaaac ggtcacttat gtctatgaaa
     1021 aagcggacgg cgctcctgtt accgtgaaat atgtcgacgc ggatggcaac gaattagcta
     1081 cttccgacac actgaacggc aaaattgatg ctccttatca aactaccgct aaaagtcttt
     1141 ctggttggac agtcaaaacg actcctgcca acgcaacggg cgtattcaca aacgctaacc
     1201 aaacggtcac ttatgtgtat gaaaaagcgg acggcgctcc tgttaccgtg aaatacgtcg
     1261 acgcggacgg caacgaatta gctactccag atacattgaa cggtaagcta gatacatctt
     1321 acgcggcaac agctaaaaac ttgagtggtt ggaagctaac agccacacca gccaacgcta
     1381 atggcgtatt tacaactgat gctcaaacag tcacctttgt atatgctaaa caagaagaca
     1441 atcctaaaaa agaggataaa aacaaaacac ctattaaaat cagcgaaaac aaaccaacag
     1501 caagcaaagt aactagaatc aaaaaacaaa caaaattacc gaaaactggt gataatcaac
     1561 aagatagtat attgtttgga ttaattggta catgtttcgt tctcttagga atttactcta
     1621 tctctaagaa aaacagctaa aataaatagc taaaactctc ttatcaattg gataagagag
     1681 tttttgtttg gtaattactt catattgcac tacttccaac ctcagaaaac ccaatttaat
     1741 ttctttaaat ttccccatat cctgttataa tagaaaatat aacaatgcct cacgaaagga
     1801 gaactatatc ctatggaaga aattagctac gccgaagttg ataaagcttt aaaaaagttc
     1861 cgtccgtttt tagttcgtga tggcggggac tatgaactta tcgaagtcac acaagacggt
     1921 gtcgtaaaaa ttaaactact tggtgcatgc gagacttgcc ccagttctga tatgacttta
     1981 aaaatgggta tcgaattaac tttagcagaa aaaattattg gctttaaaga agttgttcag
     2041 gttttttaaa caaatatttt agcgaccaaa caatcggtcg ctatttttgt ataaaaaggt
     2101 ttagaaatcc tgtaaacgtc tatcatacaa tatacataca gttagaagga ggtaagaaaa
     2161 aatggtagaa aaacaaagtg ccttagaatc aaaagcacgc agttggctca tcgaacgggg
     2221 cgtagaaatt gatgatatcg cagaacttgt attattttta caacaaaaat atcatcccgg
     2281 attggaatta gatatttgcc gtcaaaatgt ggagcatgtt cttcgcaagc gtgaagttca
     2341 aaatgcagtt ttaacaggca tacagcttga tgtgatggct gaaaaaggag aactcgtcca
     2401 accactacaa aatatcatta gcgctgatga ggggctgtac ggcgtcgacg agatacttgc
     2461 gctctccatc gtcaatgtgt acggatctat tggatttacc aattacggtt atatcgataa
     2521 agtaaaacca ggtattcttg caaaattaaa tgaacacgat ggtatcgccg ttcacacatt
     2581 tctcgatgat attgttggcg ctatcgctgc ggccgctgca agtcggcttg cgcatagtta
     2641 tcacgacgac atcgttaatt aaacaaaaac cagtaaaaca agaggcttat tcctccaatt
     2701 ttactggttt ttctttccct aattttactt ctacttgccg aatcgagttt ttattcattg
     2761 aacgaacgat aaagcggtat ccctcatgtt caatctcatc accagcttct aagtcaaaac
     2821 gttcgagcaa catccatccc gataacgtat gaacacccgg cccttcaatt gggaccccca
     2881 gtgcttcctc gacttcaaga agcggctcag atccttcaat aatataatga ttcaaagcta
     2941 cttttcgaat ccctttcgga ccttttgctt cttccatatc accaacaatt acttccatga
     3001 catcttctag cgtcacaatc cccgaagtcc cgccgtattc atccgtgaga acgacaaacg
     3061 gctcactttc ttgctgcatt ttcacaagta actcttccaa aatcatgcct tcaaacactt
     3121 ctaaaacagg tgtaataaat ggttgaatag attgcgtcac aatcgtttca tcttttccaa
     3181 gtccagccat aaccgcactg actcgtagca ttccgataat atgatcttta tcttcatctt
     3241 ccgtaactgg aaaaatatga tatgtatgtt cagaagttaa tttcagtaaa tctcttacgg
     3301 tcgccgtttg gtcaatcgca atcattgaca ttcgcggtat cattacttct ttcgctggca
     3361 cgtccccgag tttgaaaata tttttcatat aacgaaactc ttgtggattc aaaagtcctt
     3421 gcctatagct atcttcaaaa ataatcttca gttcggtcgg tgtcatttgg tccgcatcaa
     3481 ctgtttgttt taccccaaac atccgcgtga ttaaattcgc cgagttattt aaaagccaat
     3541 tgagtggaaa agtcaggcga taccaataca caagcgggcg cgcgataaac agagctactt
     3601 tttctgtgct ttgaattgta aatgttttcg gagcaagttc cccgagtacc acatttaaga
     3661 atgtaattaa aataaacgaa acaaaaatcg aaatcggctt ttcaacggat tctggtacag
     3721 gtaacattaa aaataacggc tccaaccagc cacgcattgt tgcttcacca acccacccca
     3781 tagcaagtgc ggcaagtgta ttacctaact gacaggcagc caaataatca ttcatattcg
     3841 aagtaacttt ttttacatat ttcgctcgcg ggtcctctga ggctactagt tgcaggacag
     3901 taggtttccg gattgcgaca atggcaaatt cacttgccac gaaaaaggcg gtcgctgcaa
     3961 ttaaaaatat cacaaagaaa tcattaaaaa tgtccattta gcatcctcct tatccccatt
     4021 ctatacccga ttttaacgtt tgaaccacaa gtcggccact gcctcgccgt cgatgatctc
     4081 ccccgttttt tcaaatccat attttgcata aaatttctct gctaccgtat tatctggttc
     4141 gtaagataga cgcagacgtg ctggtttttc tggtagattt ttcactatct cgataatttg
     4201 ttctagcgca tctccgccgt agcccttacc ttgatgctct ttcccagtca taaatcgtac
     4261 caaccaaaac tcaccatcat ctgtatccat tccatacatt gcgtagccaa ccggtatatt
     4321 ttccgcgtat attacaagcg aatgatacgt ttcttcaaaa cttgcttcga taatggaata
     4381 ccagttttct gcgacaaatg ttttttggtg tggatgcact tctaattttg ctgtttcgtg
     4441 aaaattgtct ttcgttaact tttgaattga gaccattttc taacctccta tttattaaaa
     4501 aaagagcaga aaaattccgc tcttctagtt aaatttccaa tcagttagtt tggttacagc
     4561 gtatgtaggt tggatttctt tcgttaataa tgcttctttt gatgtaaagc cagtgtgtac
     4621 gattaacgta tccatgccat aattgatgcc cgccataata tcggtttcgt agttgtcacc
     4681 caccatgatt gcctcgtctt tatggacacc gagttttgcg agtgcttgct ccataataat
     4741 ggattcaggc ttcccaataa aaactggcgc tgtttctgtg gctacagaaa cgacagatgt
     4801 gatggaacca tttcccggaa gcaaaccacg ctctgtcgga attgccgcat cgccattcgt
     4861 cgaaataaac atcgctccac cgcgaaccgc aagcgctgct tttgaaaatt tctcataatt
     4921 gacttcccgg tcaagcccaa cgacaacaaa agctggatta ctagaagtta tttcaaatcc
     4981 attatctgtt agttcttgtt ttattccacg ttcaccgata acataaaccg atttttcgcg
     5041 tttttgttct atcataaatt gcacggttgc ttgtgacgtc gtgaaaacat cctcacttac
     5101 agcttgaatc cccatgtcag ttaaatgttc tgctacttgc ccaggtgttt ttgttgaatt
     5161 gtttgttaca aataaatacg gaattcccgc acgttttaag ttttcgataa aaatgatcgc
     5221 ctcagaaata acttctgccc cgcgatacat cgtgccatct aaatcaatta aatacgcttt
     5281 ataattcttc aattcctaat tacctctttt actattttac ttttttaata acaaaatacg
     5341 cacaaccaaa attgcagtat tcgtaaatat attcttttaa cgtgctaatt ttgttgtcgt
     5401 atgcggcttt gcggttatcg tcttcaaaaa agcctttgag acggagttga tcgtaacccc
     5461 agtcgcctac tatataatca tatcgcccaa gaatatcgct aaaccgttca tttaacttct
     5521 cctcgtcaaa agcatcgcga taattggtga taatctcgta gtttaaatct tgaatcgtaa
     5581 tcgtcacttg tcttcctcct gtccgtacat ttttttaagt ttccatttta aaatatctcg
     5641 gagtaactcc ggtgtatata cttcttttcg tttaatttgc tttactatcg ggaaaaatgg
     5701 tgcgaacaca aacgtatcat gcgtcgcaat ccggtattcc cgcgttttat caatcggttt
     5761 attatcaaaa agtgccactt gattttccgc atcaaaacca gctctgtcca tcaaaacggt
     5821 gccaaaatac tcgcctcgga aaccaaaacc tcgaagcgga atatcttgca gttcagcttt
     5881 ctttcggtag attccgtcaa taagtatttc aagctcctca ccagacatcg ttaaagcaat
     5941 cgcgttgagc ggatgaggta acatttggtg gatatcaaat tccgtcacaa tccctgcttc
     6001 aaagtctgtc ataaaaatgc ctgcgttcat cacaaatgtt tctgccccag tccattcaca
     6061 aaccgcttca ttcaaaatgt gcgcaatttc cgagtcatca aaccaattat gcgctaactt
     6121 tctgggaatc gcaactactt tttcagagag ttcctcccgt cctttatcga agaaagcttg
     6181 aatttctgcc gtttcatttg gtgggattgg aagtttttcg gttgcgaaag ttactgcttt
     6241 tttagagata atctgattat tttcatctag ctcgatagta actttcccta catgctcgcc
     6301 ccatcttccg gcagcagcca gtaatgcatt tccttctatt tttccatttt caagtaaatg
     6361 atgggtatgc ccacctaata taatatcaat ttctggtaat tctaaagcaa ttctttcatc
     6421 tgtcggcaag ccaaggtgac tcagtaaaat aactacatct gtattcgcgt ctaagccagc
     6481 aatttgcttt ttaatcgcgc taattggttc ttctactccc cagcccattg cctcgtaata
     6541 ttcccgaaac ggcgccgttg caccgataat agcaattttc acttgttcta cttctttata
     6601 aacaatcgat ttcacccagt ccgactgctt tgtacactct ttattcgcat aaaaattaca
     6661 gcaaactact gggaaggccg catgttcata taatttatcc aagtcttcat gggccaaagt
     6721 cgttccttca ttattaccaa aagtcaccgc atcatacggc agttggttaa gtaagtccgt
     6781 attcgcaagc ccgttcgttc cttcagtaag cggatggacc cggtccaaaa aatcaccaat
     6841 atcaaaaaag agcgccgact gattttcttt atctgcagca gttcttttct cttttaagaa
     6901 attaaaaatg cgtggccaat gttccaagtg actatgaaca tcatttgtat gccataaagt
     6961 taaatgtttc atctatccat ctcactccct acttataact attgtagcgt aaaacagctt
     7021 tttttacacg cactaggact ggatgaattg ttcccttttc attttatgtt atgataggat
     7081 atattgtttt aaagggaagt gatttttttg gatattacgc aaacagtcga aattcttcta
     7141 atctctgttt ttgcaggggt agtaggctct ttgctcgggc ttggtggcgg aattatcgtg
     7201 acgcctgcct tgactcttat tttcgggatt gatattcagt atgcgattgg tgcgagtatt
     7261 atttccgtca tcgcaacaag tagtggttct gccatcgctt atatcaaaga cggcatcacc
     7321 aatcttcgtg tcgggatgtt tctcgaaatt gccacaacaa ttggtgcaat cactggggct
     7381 ttcgtcagcg gactgctctc ggccacggca ctctacatca tcttcggact tttacttctt
     7441 tattctgctt tcaacatgat taaaaaggtc ggtacagaat ttcctaccaa tgtgaaacca
     7501 gacccactcg caaccaaact aaacttacat gattcttatt acgataaatc tttacggcaa
     7561 acagttgact atcaagtggc aaatgttcct gctggttttg gtgtgatgta cggcgcaggt
     7621 attgctagtg gcttacttgg aatcggtagt ggcgcattta aagtcatggc acttgatgtc
     7681 tttatgaaaa tgccactaaa agtaagtagc gcaacgagta atttaatgat gggcgtaact
     7741 gcggctgcca gtgcaaccgt gtaccttttc caaggcgaca tccagcccgc tattgcagct
     7801 ccagttgcga ttggcgtact tgtcggtgca acacttggaa cgcgcattat gcaacgttta
     7861 aaaagcaaag ttattcggat tatttttatt cccgtcattt tatatgttgc cttccaaatg
     7921 attttagaag gattggggtg gatttaaatg gcagagaaaa aagaagaaat gtaccgcgtg
     7981 gagctaattg ttagcgcact gctacgaatc ggtgttgtcc tcagtgcgat tattattgtt
     8041 ttcggtcttg ttatgctatt tatcaccggc gaaagtggct atcctgggga aacttatcca
     8101 acctcgctta cggcgatttt cagcgggcta gggacgctta aaccatacgc gattatgatg
     8161 tttggcctct tttgcttaat tttaacgccc gtccttcgtg tcgttgtatc gttatttact
     8221 tttttgaaag aaaaagatta tttgtacgtt gggataactg ggattgtatt aattatttta
     8281 gttattagct ttttaattgg tataaaagca taaaaaagat ggcgctagcg atgcgccatc
     8341 tttttttatt ctgaaaacaa atccatttgc atcggagcca agccttgaaa ctcaacttgt
     8401 aacgcctttt gtaaatgttt cgcattatca gccgcatccc cgccgctgtt attattaaaa
     8461 atcacgacaa cttctttgga caatttttgt aaatgttcca catattttgc ccattcgtta
     8521 atttcctctt cattgtaacg gtatagcgtg cgaacctcgc gccactcggg actgttagct
     8581 ttcatccaac catactgatt ccggccgtga agccgcacta atgtcatatc gctattcgtc
     8641 tcacgcagca caatcggcac gctcccagaa ccaacttgcg gttcatcaac gaccgtatga
     8701 ataaaaccta attctcgcag caactccagc gtcttttcgg tattttgctc gttataccaa
     8761 gaactattgc gaaattcaat cgccaccggt aaatcaccca ttttcgaagc aatatatttt
     8821 aaataagtca cattttcttt cgtacaatta aaatacggcg gaaattgaaa taaaattgcc
     8881 tgtagttttc ccgtttcact tatcggcgca atcatatcca tataagccgt atacatcgca
     8941 ttttcactat caaaatactg cgaccattcc ttatgtttcg tcatcgccga aaatgcttta
     9001 atcacaaaac gaaattcatc cggagtttgc gccgcccagt ttgccgttgt tcgcggagaa
     9061 ggaatcgcat aaaaactcgt atcaacctcc accacaggaa aatgtgccgc ataatcagcc
     9121 aatgttaatt tttttgattg taataaagaa tcatgatcac tccacccagt taacccgatt
     9181 gttaccatca actgccaccc tctctatcgt tatgatttat gtttattata acgcaaaaag
     9241 gagggagaag cctttaattt ggtcctcgtt tttacttcga aacaaaacaa aaacttcaac
     9301 tgtctagcag ttgaagtctt tatcatatat taccactcgc gctctctaag taattcttca
     9361 atatcgatat ctatcttata atgagctaaa atcgggatga ttgtttcagc aatggaatcc
     9421 cttgctcctg tttctaattc gctctcattt tcataaaact catcttgcaa tgcattaatt
     9481 gctaatgtca tttcatcaaa tttagcttga atcgcttctg tatcatgatt cccttgttct
     9541 aaaaattgaa ccgtatcgaa aatacattgc ttaattttat ctactagaaa cggtggaaag
     9601 aatggatctt gatacattcc ctctaaatat ttaatttctg tcataattat cagtcctttg
     9661 ctaaattgtt ggaaccaata tatcacttca tttataaaaa tacaagccag atttattccc
     9721 tgctattttt ggatttcatc aaaaaaagac gaactaaaaa gttcgtcttt tgctttattt
     9781 aaccaatcga gccttccatt tcaaacttaa tcaaacggtt catctcaacg gcatattcca
     9841 ttggtaattc tttcgtaaat ggttcaatga agcccataac gatcatttct gtcgcttctt
     9901 cttcgcttaa accacggctc attagataga aaagttgttc ctcggatact ttggaaactt
     9961 tggcttcatg ttctaatgaa atgttactgt ttaggatttc gttgtacggg attgtgtccg
    10021 atgtggacag gttatccata atcagcgtat cacattcgat attcgaacgt gcaccgtctg
    10081 cattacgacc aaaatgaaca attccgcgat acgttacgtt tccgccttgt ttcgagatcg
    10141 acttcgacac aatcgtagag gacgtattcg gcgcatagtg catcattttt gctccagcgt
    10201 cttgacgttg gcctttacca gcaatcgcga tagaaagggt cgttccacgt gctccttcgc
    10261 ctcgtaaatg tacagctggg tatttcattg ttaatttcga accaatgttg ccatcaatcc
    10321 attccattgt cgcattttct tcacagaaag tacgtttcgt tactaggttg taaacgttat
    10381 ttgcccagtt ttggatggtt gtgtaacgac agtaagcgcc tggttttaca atgatttcca
    10441 cgacagcaga gtgaagggaa ttcgtagtat aaacgggagc agtacagcct tctacgtagt
    10501 ttacgctggc attttcgtcc acaataatta gtgtccgctc aaattgaccc atgttttccg
    10561 agttaatgcg gaaataggct tgaagtggcg tatctacttt gatacctggt ggtacgtaga
    10621 tgaatgagcc acctgaccaa acagccgagt ttagcgcagc gaatttgttg tcgcttggtg
    10681 gaattacttt tgcgaaatat tctttgaaaa tatcttcgtt ttcttttaac gcggaatctg
    10741 tatctttgaa gacaatccct aaatcttcta ggtcttgctt catattgtga taaactactt
    10801 cggattcata ctgcgcagat gccccagcca aatatttttg ttcggcttca ggaataccta
    10861 atttatcaaa agtacgttta atttcttcag gaacttcatc ccaagagcgc actgtttgtt
    10921 cagacggttt cacgtagtaa gtgatgtctt caaacttcag ttctgacagg tcgccacccc
    10981 aagtcggcat tggcatttta taaaattgct ccaaagactt caaacggaat tcaagcatcc
    11041 attctggttc ttctttaata ttcgaaattt ctcttactac tttttctgtt aatccgcgtt
    11101 ctgtacggaa cacagaggta tctttgtcat ggaatccata ttggtattcg ccaatttctg
    11161 gaatttcagt catgtcgtat cctccttttc gctacttatt ttgttccttc tttttcaaaa
    11221 atcgctctct ccattgcttt ccaagaaagg gttgcacatt tgattcttgc tgggaatttc
    11281 gcaactccgg caagtgcctc aacgtcgccg tattcatcaa tcgtttcatg gtcatgacct
    11341 tgcaccattt ctgaaaattc acgtgacatt tttagtgcct ctttctcggt tttcccaata
    11401 atgctttgcg tcatcatcga agcagaggcc atcgaaatcg aacagccgct accagtgaat
    11461 tttgccgcaa cgattttatc accatccatt tttaaatgaa gatgaatttg atcaccgcat
    11521 gttgggttgt tgaggtcgat tgttacatcg ctatctggga gctctccatt attgcgcgga
    11581 tttttatagt gatccataat gacttgtcta taaagctgat ctaatttccg gcttgtcata
    11641 atccaaaata ctcctttgtt aacttgaggc catctataag cgcatcaatt tcttcttttg
    11701 tattataaat ataaaagctt gcgcgagctg tggaagaaac gtcaagccac ttcatcaacg
    11761 gttgcgcaca gtgatgacca gctcgaatcg caattccgtc ttcgtccaaa atagtcgcaa
    11821 tatcgtgtgg gtgtgcgcct tctaaattga aagtcactaa gccacatcgt ttactcgcgt
    11881 cttttggtcc ataaatggta atgccttcga ttttgctcat ttcttctatc gcgtagctgg
    11941 ctaatgcttg ttcatgtgcg tgaatatttg cgagtccgac ttctgccaag taatcaatcg
    12001 ccgcacctag cgcaatcgct ccgccaataa tcggtgttcc agcttcaaat ttccacggca
    12061 gttctttcca agtcgaatca tataattcaa caaaatcaat catttctccg ccaaattcgg
    12121 taggttccat cgcatcaagc aattcacgtt tgccatacaa ggcgccaatg ccagtaggag
    12181 ccatcatttt gtgccctgaa aaagcataaa agtcagcatc taaatcaact acatcaactt
    12241 ccatgtgagg cacagcttgc gcaccgtcaa cgagaatgac tgctccaaat tgatgagcaa
    12301 ttgctgcgat ttctttcatt ggcgtgatag tcccgagtac attagaaaca tgagctaatg
    12361 caacgatttt cgttttttca ccaatcgttt ttttcgcttg ttccacagaa atcgttccat
    12421 cttcttctaa ctcaatatat ttcaaaaccg cgcccttgcg tttagctagt tgttgccacg
    12481 gaatcaaatt ggaatgatgc tctagataag aaataacaat ctcatcgccc gcttcaatat
    12541 ttgcttccgc gtaactatct acaactaaat taatcgctga agtagtacct cttgtgaaaa
    12601 taatttctgc tacttcacgc gcatgaataa acttggctac tttacctcga gctgattcat
    12661 aagcatccgt cgctcttgct gcaagtgtat gcacaccgcg gtgaacgttc gcattatcaa
    12721 actcatagta atgtgttaaa gcttcaataa cttgtttcgg cttttgtgaa gtggcagcat
    12781 tatctaaata agctagcggt ttttcattta tttcttgagc taaaattgga aaatccgccc
    12841 gaattttttg gatatcaatc atttagcgca ctttcccttc gattacttca cgaagcatcg
    12901 ttttcacact ttcgattggt aactgacgaa caacagggtc taagaagcca tgaataacta
    12961 atctttctgc ttctttttga gaaatcccgc gactcatcaa atagaataat tgtagtggat
    13021 caacgcgtcc aacagaagcc gcatgccctg ctactacgtc attttcatca attaataaaa
    13081 ttgggttcgc atcaccgcgt gcttcaggac taagcatcag tacacgtgat tcttgttgtg
    13141 catctgactt agaagcgcca tgtttaatgt gaccaattcc gttaaaaata gttgtcgctc
    13201 tttctttcat aacaccatgg gataaaatcg taccattaga agcttttccg taatgtgtca
    13261 cgcgcgttgt cacgttttgc gtttgcttcc cgcgtccaac tgtcacagtt ttcacatcag
    13321 cagaagatcc gtcacccatt aggtttgtta cgttctcgtt gatagtatcg ccatcattca
    13381 tcaggccaag cgcccattca atttggctat ctgttccaat gtgtccacga cggttcacat
    13441 atgtcgtaac atcacttgca agattgtcta caccgccaaa agtaatgcgc gcatttttct
    13501 cagcgattac ttcttccaca atgctaacaa tccctttagg tgcgttatct accgttacgt
    13561 agttttccac ataagtgact gcgctattat catccgccac aagcaacaca tggttaacaa
    13621 gtggagattc cgctttatct tgtacgaaaa cagcttgaat tggtgctttc acttcgacat
    13681 ttttaggaac ataaaggaaa atcccaccgt tcacaagcgc cgcatgaaaa gcagtcagtt
    13741 tgtgttcatt cacttgaact gcatctttca tgaaatattt cttcacaagt tcaggatggt
    13801 ttttcacagc cgaaataata tctgtgaaaa taacgccttg gtcaactagt tcttgttgca
    13861 actgaagtct cgcaggtctt tcatccattt gaacgtaaaa attggcttct ttattatcta
    13921 aatcaactaa attcgctact ttttccggta gagtttcatt cgttacgcct tctttaaaag
    13981 gtataaacgt ctcaaacttt gtgaaattcc agcgagtaat ttttgtttta tccacaaaag
    14041 gcaagtccag ttccccgtaa gctttaaaag cattgcgacg gatatctaaa aaccaatccg
    14101 gttcattcgc attacttgaa aaagcgtgga taaaatcatc tttaatcgtc atattttctg
    14161 ccatgatttt aacctcactt ccttattgtt ggtctactgc ttcttcttcc tcaagttcga
    14221 taccaagctc ttgtttaatc cagtcataac cttctgcttc taaacgtttc gcaagttcag
    14281 gtccgccttc ttttactact ttaccttgca tcattacgtg aacaaaatct ggcgtgatgt
    14341 agttcagtaa acgttggtaa tgggtaatga ttaagcaacc gaatccttcg ccgcgcattt
    14401 catttacacc tttagagaca actttaagcg catcaatatc aagaccagag tcaatttcat
    14461 ctaaaatcgc taattttggc tcgatcatta ataattgcaa gatttcatta cgttttttct
    14521 ctccgcctga aaatccttca tttaaataac gttccgccat ttcttcgtcc atatctaaaa
    14581 tatccatttt ggcatctagt ttgcggatga attgcattac tggaatttcg tcgccttctt
    14641 cgcggcggct attgattgct gcacgaatga attcagcgtt tgtaacacca ctaatctcac
    14701 ttggatattg catcgctaag aaaagaccag cacgagcgcg ttcgtctact tccatttcga
    14761 gtacatcttc cccgtcaagc gtgattgttc cttgtgttac ttcatatttt ggatgcccca
    14821 taatagctga ggacaacgta gatttacctg ttccgttcgg tcccatgata gcgtggattt
    14881 cgccagttga aatttccagg ttaacaccct tcaaaatttc ttttccttct atttcaacat
    14941 gtaaatcttg aatctttaaa gttgccataa aaaagtcctc cctagtgtaa aatttgcata
    15001 atcctagttt agtataattc taatctgatt acaactataa aaaccagtat tcttcgcatt
    15061 ctccccttca ttctactatt aataaaggtt ttttaccagt tttctagcat tatcactgtt
    15121 tctattttat ttgagaatcc gtccctaaaa aaatacaacg tgtcatacca ataaatgaaa
    15181 gggatttttc atcctaaaaa agggattgta tatcttattt atatatggta ttgttgtaac
    15241 gtaacaaaat tgcaacataa taactttttt gtaataaacg attacttatt gaaggagaat
    15301 ttaaaatatg aagaaagcaa taatggctgc gaccatcttt gtattgcttt tagccacgtt
    15361 atccgggtgt agctccccta aatctgactt cactgccgcc ttgcaaaaaa cagctgaaaa
    15421 ccgacaatat acaacaaatg tgacattcca agtaaataac ctctcagaaa gttacataaa
    15481 aaaacttggt cctgaaatcg acttaaatca acttaaaaaa tcgaacatcc aatataaaat
    15541 ttctgttgat agtgattccg catcttccta cagcgcatct tctattcact ggaaaggaaa
    15601 aaaaccactt gatttaacaa tacatgcact tcaaaacagc gatgacggaa aagcttatat
    15661 tcctgtatct gatttctacg acgcttctga tagcatctcc agtttattac cggattcagc
    15721 agctagaatt ttcaaccagg tactagatca aaacaaagac ttggagtcga agtatttaaa
    15781 cctattcgaa acaattcaaa atttttccaa tcaaacaatt gatacagaaa ctgtagaccg
    15841 ccaagcaaaa gtattgaaaa aaatggaaga aactgccggc attgcgattt atagttatct
    15901 aaacgaccta gatgaccaac acttcacttc aaaagataat ggtgacatcg tcctaaaatt
    15961 atctaaaaac gagattagcg atttagttaa ttccgttatc accaaacttg atgataacgg
    16021 aagtgttgta gcacttattg gagaaattga cggtagcact caaaaagcag caaagaaaaa
    16081 atggaacaat gctcaaaaaa gtatccaatc atccttaaaa gctctaacag aaaacaaagc
    16141 acaaacatta gatttcaaat taacattaac tcctgacagc aaaaaaggat ttagtaaagc
    16201 gattatcact actaattttg aagataccaa aacaaaagac ttaatggact tcacaacaac
    16261 gattgatatg ctagactacg aaaaagttcc tccaatgcca aaaggaaaag aaattgtatc
    16321 caaaaaagaa ttagataaag ccatttccga tggactgaaa ttatatttaa gtagcgctca
    16381 ataaaaaaat ccttttaccg aaacggtaaa aggatttttt ctattttatt tatccactgg
    16441 aacaacagcg ccgtcccatt ctttcgtaat gtaatcttga atttcttttg aatgaagtac
    16501 ttttactagc tctttaatgt ttttatcatc ttttttcttt tctgttgtta caacgatatt
    16561 cgcataagga gagtctttac tttcgattgc aatagcgtct ttagaagggt ttaagccttg
    16621 atctacaaca aagttagagt taatcgctac aacgtcgcct tcttcgttat tgtaggcagt
    16681 catcaagtaa gctggatcaa aatcgtattt gaatttcaag tttttcggat tgtctttaat
    16741 atcatcaaaa gttgcatctt gtggtttcac gccatctttc agcgttaata gtccgttatc
    16801 cacaaaaata ccaataacac gcggccaatc agattttgag ttagaaagta aaacttgcgc
    16861 gccgtctttt agatctttaa tgtctttaac ttttttagag tagataccca ttggttcgat
    16921 gtgaatcgcg ccaacatcag caaatttgta gcctttttct ttttcttcta gttcaagata
    16981 tggtttatgt tggaagtagt tagcatctaa atcgccttct tctagcgctt tattaggcat
    17041 aacgtaatct gtatatttaa caattttcaa gtcaatccct ttatctttca agattggttt
    17101 tgcttgttct aagatttggg catgtggtgt attggacgca cccactacca attggttatc
    17161 gtctttacta gatgaagctt tatctgagga gccaccgcaa gctgtaagta ctaaaactaa
    17221 acttaatgtg aaaatgaaac caagaacctt tttcatgaaa ttctctcctt ttttgcgggg
    17281 attccgcgtt tttttatata aatttcttca tatacattgg ttagcgtttg tcggttcgtt
    17341 ttgttaagaa gtcgccgata aactggaaaa taaagacgat aattaagata ataattgtcg
    17401 caagtactgt tacatcaggt tgtccacgtt ggaacccttc aagataggca gtattcccaa
    17461 gaccgcctgc gccaatgaca ccagccatcg cggtaaaacc aacgagcgaa attgctgtca
    17521 ctgtgatacc ggaaataatc gctggtaagg cttctgggat gagcacttta ccaataatgg
    17581 taaacatgtt cgcgcccata gatttggctg cttcaataac tcctttgtcc acttcacgaa
    17641 aggcaatttc taccatccga ccataaaacg gagcagcaga gataatcaaa gctggaagtg
    17701 ccgctttcgg cccaattaca gttccgacaa gcgattttgt catcggtaat agtaatacaa
    17761 ttaaaataat aaaaggaatc gagcggaaca cattgactaa aatggctgta atccagtaaa
    17821 gaatgcgcgc tccggcatgt tttttattgt tagttaaaaa tagtaataat cctaacacaa
    17881 tcccgagtaa aaaaaccgca aataatgaaa caagcgtcat gtataatgtt tcttgtgttg
    17941 cgacccacat catttgaaaa tcaacatttg gaaataattc ttgtaatttc gtcatcgttc
    18001 taacacttcc gtttctactt taagttgacg tagctgtgtt agactcgcat ttatcgcatc
    18061 ttctgtacct aaaacttgta cataaagcgt tccgtatgcg ccattttgcg tttgcgttaa
    18121 gttcccgtgg agaacattta gcataacatc attttctttt gctacttgag aaatgactgg
    18181 ttgagttgca ttttcgctca taaagagtaa tttaacaatt tttccttctg cataattatc
    18241 gagtaataga tggattaatt cttctgtttc gtctgaatcg gtaacttggc ggacgaagcg
    18301 ctgcgttact ttttcttgtg ggtgacggaa aacatctaaa acatcgccga gttcaacaac
    18361 ttttccgttt tccattactg cgacgcgatt acatattttc cggataacgt gcatttcatg
    18421 ggtgataacg atgatagtta aatggaggcg tttgttaata tctaggagga gttctaaaac
    18481 ttcatcggta gtttgtggat ctagtgcgga agttgcttca tcacaaagca atacttttgg
    18541 gttgttcgcc agcgctcttg cgataccgac acgctgcttt tgaccgccgc ttagctcaga
    18601 tggataggca ttttcttttc cttccaagcc aacaaggcgg atgagttcat ttactcgaaa
    18661 gcgtcttttt tcaccgcgaa cacctgcaat ttctaatgga aacgcaatat tttctgccac
    18721 agtgcgggac cataataaat taaaatgttg aaaaatcatt ccaatttgct gacgagcttt
    18781 tctgagttta ctgccacgaa tctggctaat gagtagatta tctacttcaa ccgttccagc
    18841 acttggtagt tccagtccgt taaacatccg gattagcgta cttttaccag ctccagaata
    18901 tccaactact ccaaaaatct cgccttgttc aatttctaaa tcgacatgat cgactgcgag
    18961 aactttattg tttctggacg tgtattcttt tacaacgttt tgtaacgtaa tcatctctat
    19021 caccttttct acattctgat atacaaaaaa gcctttctgc tgatgagcag aaaggcagca
    19081 ttttttcaaa tggactaact tccttctcat ctttcagaac aattagttgt tctgcatgac
    19141 ttagcacctt aaacacataa tgaattattg tttaggttgc tgggtttcac agggcatttc
    19201 cctccaccac tctggataag atttctacat attattaaat cacttcattt gtgactatag
    19261 tgacgtttct tgttttttca tattaccttg tctagtagac tttgtcaata actttctcac
    19321 ttatgttaat ttatttgtaa gttatttcac taataatact attatctgtc tgttcattct
    19381 gactagccat ttgagaggct attttaattt gggccctatt ttgatatttg agttcgctat
    19441 tattaatttg aactatgtac ataaataccg caataaccgt aatacaagca acaacaatta
    19501 aaacaatatg ttttttcatt ctcctctcct ccgtgattta tattctacag aaagaacata
    19561 aatcacgcgg aaagaaactt ttaagaattg ttaaagatta aattagtggc agtttaacga
    19621 taaaactggt ttggcgtttt ttgctttcgg cagtaacaat tccgccatgt ttttcaacga
    19681 tagatttagc aatcgcaagg cctaatccgg ttccagtcgt cgtccgattt ttatctactt
    19741 tgtaaaagcg ctcgaacaag taaggtaaat cgacattagg aatttcttca ccataattcg
    19801 ttacgcgcac aacagccata ttatcttctt tcttagcact aacatcaatt tgtttgttgc
    19861 cttctccgta tctaagggca ttcgaaaata aattctcaaa taagcgcatg atttggttgc
    19921 catcaccgcc aataattagt ttgttagcat caaaatgttc gacaatctgc atatttcgtt
    19981 ctgcagctcg cccgtcgtac tccgccacta attgccgtag caactcaata atgtctaact
    20041 catctttctt tagttggtaa tccacgctat cgagccttgt ataagaaaac aaatcatcaa
    20101 taagtttgtg caaatgacgc gctttcccgt acacaagctc ggtgtaataa cgcagctcaa
    20161 tttcatcgcg ataacggtct tcatgtatat aacttaaata gcctaaaatg gatgtaagtg
    20221 gtgttcgcaa atcatgcgaa acattcgtaa tcaaatcatt tctggcttgc tgggcctgtt
    20281 cttcctgctg cattaatttt ttctgccgtt cccgcatatt ttcgatgtta cgttccagtt
    20341 cttgaatttc cggcacaaaa ctttctgtgt caactggctt cccgtcgtta agcgcaaaat
    20401 taatcgtacg cagttgtttt ttcaaaattc tttgacgcat caaacgatag aaaaaagcaa
    20461 agaatagaca agctattaaa aagataatca gaaattttag cgacatcatc caaaaagatt
    20521 gcatgattcg cgtatattta ttcgttccaa ataattgaac aatagcttgt gacacttccc
    20581 gtaaaaacaa agaatcatcc cgaatggaaa tgctccataa ataaatagtt tggatggtaa
    20641 tcaacgccaa aatccaagaa acagctgcaa aaaaagtcgc ctgccaaaca ttcatcacat
    20701 ggctaatttt cgtaaacaac agttccagtt tagatttcaa ttttgtaccc tactccccaa
    20761 atagtcttaa tcacattttc tccacccata gcctcgcgta acttatcacg caaattacta
    20821 atatggacca ttactgtctt actcgctcca agggcctttt cttgccaaat cttctcaaaa
    20881 atatattctg aactaaaaac gcgccctggc tcactcgcta gtaaaaatag aatatcaaac
    20941 tcagaagtcg tcaaatgaag ttctttgcca ctaacagtta caacgtgaag gccacggtca
    21001 actactatcg gcccaatgat gactttatct tgactaacag gctctgcctg gctcatttgc
    21061 tgcattcttc ttagaatagc tttcacgcgt acagaaagct ctaatggatt gaatggcttg
    21121 accatataat cgtccgcacc tgttaaaaga cccatgattt tgtcgttgtc ttcagccttg
    21181 gcactaagca ttaggatggg agtcaaaatc ccattatctc tcattaatcg gcatacttct
    21241 aagccgttca tttcaggcat cataatatct agtatcacta aagttggctg tttttcttga
    21301 actaaacgcc atacttccgc accatcataa gcttgataaa tcgtatatcc ttcattttgt
    21361 aaatataatt ttactaaatc aacaatttct ttgtcatcat cagcaattaa aatagaagtt
    21421 gtcatactca ttgtcctttc cagtcttatt tctacctatt gtaacacttt agcaacaaat
    21481 cgaatagaaa gagctcggat taaattctgg taagaacccg ttcttcttcc ggctctaagt
    21541 ggataaggac ttccgcttta gcataaaaat tcataatctc tgcctcaatt tcgtcacata
    21601 gcgaatgagc actttcaatc gtcatcgatg aagatacaac taaatgaaaa tcaatatact
    21661 cttctgctcc tgcccgtctc gagcgaaaat catgaaattc aataaatctt gctttatgag
    21721 ccaaaataat ttgcttgata gcctcttctt catccgcaga caagcgtttg tccattaatg
    21781 gagggaaaga ctcttttaac aatttataag cctcatacat gatataaaac gccgttaaaa
    21841 tcgcgatgac aggatctaac caaagccagc cggttatgta tacaaggaac aaactaagcg
    21901 caatcccaag cgatgtgaac acgtctgtat ataaatgtaa tgcattggat ttcatcgcta
    21961 ctgaattagc ttcatcagcc gcttttttga tgatacgaga cacgataata ttcacgatag
    22021 cgccaaaaag cattaccata ataccaagcg ccggaaaacg aatttcgtga ggatttacaa
    22081 gtttattaac tgattccaca atgatccaaa tccccgctac aaaaataagt aaagtttcaa
    22141 tggttcccgc aatattctct gcttttccat gtccatatgg atggtcttca tcggccggtt
    22201 gattagaaat ccgaatcgag aagaaagtga tgattgacgc aaataagtcc atggacgagt
    22261 gaatcccttc cgatatcact gccacagaac ctgtaaaaaa gccgacaatc aatttaagta
    22321 caacaataac aaaattacta cacacagata aaatagtaag attagaatgg ttcataaaaa
    22381 agcctccgat attttatgtt tcactaaaaa tttctcttta taaaacacta atttaacaac
    22441 tcgaattatc ttaccacaag cagccaaatt gtgtctatag caacgttttt agttaaatac
    22501 agttctatat cgggagcgaa acttttttgc tccagggcaa aatttaacac agaaaaaatc
    22561 cctgtattac tcactataca ggaattcaaa aatggccgtt gcatcatgta attggtagct
    22621 taaatcggcc ggttgaccgt tcttaaattt aactagcgcc gggactgatg taatttcaag
    22681 attttgcgca atatcaggca cataatttaa atctactttc acaacttctg tatgaacctc
    22741 gtccgattct aaaaccacat ccacaaggcg gcttgctatt tgacagctac cacacattgg
    22801 agtaaaaaag aaaacaacga agtcctcacc gtttttttgc gccgtccgca aacgttcttt
    22861 ttcccaaatt tccaggaaaa acgcctccta tcaaaaaaga ccagcttcgg ttatcccaag
    22921 ccggcctcct aaaaattaat ctaatacttt ttcgtaatcg tcacttgata aaagagcctt
    22981 tacatccgct tcttctactt cttcaagttt taaaatccag cctgtatcgt atggattgct
    23041 attaattaat tctggttcat cttctaatgt ttcgttaaca gcaactactt taccagttac
    23101 tggtgcataa aaatcagata ctgtttttac agactcaatg ctaccaatag agtcgccttt
    23161 agctacagtg tcgccaacct ctggcaattc aacaaatacg atatccccta attgatcttg
    23221 agcaaagtcc gtaatcccaa taacataact accctcgtct gctttcaccc attcatgttc
    23281 ttctgtgtac aataagtctt ttggtaaact cattttcaaa actcctcctt tttcgtgcaa
    23341 ttatctatat tgactatttc caagttgctt caaattcttc ttctttgaaa ccaagcgtca
    23401 cttctttgcc gttcgtagtt agtgggcgtt tgattaacat accgtctgat gcaagtaact
    23461 tataagcttc ttccggcgaa agtgtatcta atttatcttt cagtccaagt tcgcggtatt
    23521 taataccact tgtgttaaag aaacggcgga ttggaagccc gcttacttca tgccattttt
    23581 gtatttcttc cgcagttggc gtttctgtct taatatctac ttcattaaaa tcaacatgct
    23641 cattttcaag ccatgctttt gctttcttac aggtgctaca ttttggatac caataaaaat
    23701 taatcatttt gcctctccct ccgattgcat tctactacta tcatagtgca ttttttccga
    23761 aagtacaaat ggcaacactt agaaaaaaac agagcatttg aaagcgtatt cattcttggt
    23821 tttaaaaata caaaagccat tttcgacttc tgtattttct tttttaagac gcgtgatttt
    23881 cttctttcac ttcaaacatc gattttttaa agttaaacct tatcccgagc accaggccaa
    23941 cagccatcat gttcccgagc aaggcgctac caccgtaact aataaacgga agcgggatac
    24001 ctgtaattgg cagcaaacca atattcatac caacattttc cagtacgtgg aacattaaca
    24061 tcattacaac ccccgtacaa atgtaagagt aaaacggtac gccaacatcc agcgccacac
    24121 gaataatttg ataaattaat aagaaataaa ttgctaataa aatactagct ccaataaagc
    24181 cataatctcc ggctacaatc gtaaaaataa agtcattgtg attttctgga attgcaatgg
    24241 catcatatcc cgcaccgttc ccagaaatct gaccagaacc aattgccgtc atcgctcgca
    24301 gcacttgata acccccgcct tgaggatcat tctccggatt aatccacgtc gtaatccgct
    24361 caaattgata gggtttgaag cctagactcg tcagccaatt ttggtgataa ataaccatcc
    24421 aaataagcgc cgtcccaatt gccgcaatcg aaccaaaaag tggcacgata attttccatg
    24481 taattccgga aataagaatc attcccgaca taatagcgat aaatacaagc gcggtcccta
    24541 aatcgggttg cagcatgata agaataagcg gcattaatgt aaataagcca atctttaaaa
    24601 gtaaccaagc atcataacta aagcggtgga ccttataagt tcggttatga tcccaaatca
    24661 cttttgctaa aacgacaatt aagataacct taacaacctc agatggctga atgttcccta
    24721 agaacgggat aacaatccag ctctttgctc cttttacttc tttcccaaaa agcaatacaa
    24781 atacgagtaa aaatagacct agtccgtaaa agtagtaagc ccatttcgtc agacgatcat
    24841 aatctagttg catcacgaca ataattgcaa atgtcgacac tacaaaccac atggcttgtt
    24901 tgaccacaaa gtttgcatca tattgattat ttgttaattg cgcactataa atggacacca
    24961 aactgattat catgagtaac atcatagata ggacaatccc gtaatcaatg cgtccagcta
    25021 gtttattttg ttgattcatt atttaattac tccttactgg ttggtttgta taaacaaaac
    25081 gaacgctttc tcccaaacag tttaaaaaag aaaatcagaa acgattttct ttccctaagt
    25141 taacttctgg agcattgtat ctcgccgata acacgagccc aagtgccata aatgcaccaa
    25201 gaagtgagct tcccccataa ctgacaaaaa gtagcggaat accggtaatt ggaagaagac
    25261 caattgtcat cccgatattt tctaaaacat ggaacaaaat catcgagcaa acacccgtac
    25321 aaatatacga ataaaaagga atattaatat ctaatgccac tcgaattatt tggtaaatca
    25381 gtaaaaagta taacataata agtacacagc caccaatgaa accaaaattc ccaccaataa
    25441 tggagaaaat aaaatcatta tggttttccg ggatcgcaat ggcttgatta ccgattccat
    25501 tcccttgtaa ctgcccagaa ccaatcgctt gcatcgaccg aagtagctgc attccgtcac
    25561 caagtggatc ctcttccggc cttaaccaag aagtaatccg tttaaattgg taaggtttaa
    25621 atcctagttt ttgtaagaac tcttgattat acataactaa gtagattaat gtcccaccaa
    25681 tgagcgcaat cgaactaaaa actggtaata aaattttcca agtaacacca ctaataaata
    25741 ccataccgat aataatagca ataaatacta gaatcgtccc aaggtctggt tgaagtgcta
    25801 caagaccaag cggaagaata gaaacaatac ctatttttaa cagtaactgc atatctaagc
    25861 tcacggtatg taatttatat tttttattat ggtcccaaat gacttttgca agtgctaaaa
    25921 tcaaaaaact tttcattaat tccgatggtt gcaagctccc aagcgatccg atactaatcc
    25981 agctcttgga tccttttcgc tcgtcaccaa cgataagtac gagtacaagc aataagtttc
    26041 ctatcccata aagataatac gccgcccatt gcaacttatc atagtcgaaa aaaagtacaa
    26101 taacaacaac gaccccagta gaaataacaa tccaaataga ctgttgcaat aagaaattat
    26161 ttgtatattg gtcgttaaca agccccgcga cataaatcgc tactagacca ataatacaca
    26221 gcaacatcat taaaaatata atcgaataat ctattcgaac tgcctttttt ctatttctgg
    26281 ccattatttt ccgtcctttt gtgtttgaat ttaaatgtaa aaaagctgct attcttaaaa
    26341 agagcaacag ccttcatcta ttataataaa gtttaccttg gataggaagc tttttcacca
    26401 aattctaatc ttctttctgt tttctttaat attcaaaacg agtcgaagca agtggatgaa
    26461 tatgctgctt tccgtctttt tcggtaatat ccgccgtaat atgaaaaacc tcgcgaagaa
    26521 gctctgtcgt gaaaacttct gtaggcgagc catctttgac taattgtcca ttttcgcata
    26581 caaaaacatg gtcactgtaa attgctgcct gatttaaatc atgtaaaacg agcacgatag
    26641 ttaaattata ttctttattt aaatgcacga gtaaatctaa aagctccagt tgatgcgcaa
    26701 tatctaaata agtcgtgggc tcatctagta ataaaatcgg tgttttttgt gcaagagcca
    26761 tggcgagcca agcgcgttgt cgttctccgc ctgataacga atgtagcggg cgataagcca
    26821 attcttctaa gttgcacact ttaatagccc agtgaatgac cgcctcgtcc tcctcttgca
    26881 aagtggagag ccagcttcgg tgcggcaaac ggccatacgc cactaaatca tgcaccatca
    26941 catctaccaa accttctgga gcttgtgata acatcgtcat ttttttcgct aaatctttag
    27001 atgggatttc agtaatgttt ttatcattta agaaaatctc cccgctatcc ggtgtcaaaa
    27061 ggcgcatcat caaacgcagc atagtcgatt ttcccgagcc gtttggaccg ataagcgtag
    27121 tgattttccc ttctggaata ctcgcgctca cgtttttcat ttcgaaatct cttttacgtg
    27181 agaaagaaac attttttagt tctaatgctg atttcatgaa gcaaccctcc ctctttgaag
    27241 taagaataag aagaatggtg cgcctatcat tgcaagcagg attccaacag gaagctcgat
    27301 ggatccgaac caacttctag ctgctgtatc agcaaagcca actaataaag ccccgccgag
    27361 tgcggatagt ggcagtaagt atttatagtc atttccaatg atcaaacgga aaatatgtgg
    27421 cacaacaagt ccaacaaagc caataagtcc agctacacta accgcaaccc cactgagaaa
    27481 ggccgccaac attataataa aaaagcgatg ccgttccaca gaaaagccaa gtaatttcgc
    27541 cgcatcatcc ccaagtagca atacattaga agaacgaatc gcaaaaccac ttaaaacaaa
    27601 cccgaccagc atatacggcc aaatcatatc caaatgatac caactttttc cggaaagtgt
    27661 ccctgtcatc caagaaataa cactttgaac ccggttgcta taaagcacca ttacgccaga
    27721 cgtcatcgca ccaataaacg cattaatcgc caccccagac aaaattacac gtaaaggaga
    27781 aacaccgcga tcccatgcaa gcaaataaat caaaatagct gttccaaacg cccctaaaaa
    27841 cgcaccaatc ggcacaaagg aagctaacgc aggaaatgct aatgtcatta aaatggccac
    27901 gaagccacca ccggctgaaa ccccaattac gcctgggtca gctaatggat tccgcatcac
    27961 gccttgcagc aagcatccag caatcgccag cgctgctcct actaagaaag caattaataa
    28021 ccgcggcaag cgcaagttcc aaatcaattg gttcgctagg tcacttcccc cgccagttag
    28081 cgtctgccaa gcatcactat atgtaatttt cacggacccc gttgtcagtc cgtagaaaaa
    28141 agctaaaata agtaaaatga ttactacaat aaaagttatc cgtctacgtt ttcgccgcgg
    28201 atcatgcgcc ttcacagttg tcattagtta tccaccttat ttatctcatc tgtcatataa
    28261 tccaatgctt gatcaatctt aattccagga tttgttccga atagctctgc aggaagtacg
    28321 acaatatgat catttttaac ggcgcttgtt gaattccaag cttcattttg tttcatttct
    28381 ttcttgaatg ctgcttctgt ttctttttcg tccccaccgt gaatcattaa gaaaatcact
    28441 tccgggtcag cagcaacaat cttttctacg ttcatcgaag cgtattgtgg gaagttttca
    28501 acgcctttaa aatctttcgc tacattttct ccaccagcaa tttctaaaac atttccactt
    28561 aatgaggatg gtagcgccgc gtaattactg ccaggagccc ctagaacaag taatgagcgc
    28621 acttttttac cttgttgctt cttcttcact tccgccactt tttggtcaat attcgcttct
    28681 aactctttgg cttttgtctc tttgcctaaa agctcgccaa gcacggctgt ttgtttttta
    28741 atttcgtcaa ttgagttggc tccggtcaac acgactttcg gtccgacgcc ttccatcgca
    28801 ggaacatctt ttaagttttg ttctgaactt gcgacaatag catcagcacc aagagaggca
    28861 attttttcta aattcaaatc atgggtattg cccacttctg tagctttctt cgcaccatct
    28921 ggaacaccac tcgcgtctgt tgtttggcga cctaccaccg ttccaccaag tgcatagata
    28981 atattcatat ccgcattcgt cagtgcgata atccgttctg gttttttatc aaaagaaaca
    29041 tcacgcccag ccatatctgt tatcgttaga gccgcttgcg atttattttc cgttttagtt
    29101 gtttcattat tcgtatcagt tgccgtatca tttccacacg atgcaaggag tagtgcggct
    29161 gttatactta acgtcaatat agttattttc ttcataattc ccctccacaa cactgtcctt
    29221 ttcattttac taaattataa cacgatattc aaaaagacga acccctaatt gagaattatt
    29281 ttcatttatg ttcaaatagt cgatatttct cagccgatac tttataatta acttaaggag
    29341 gcgatgaaaa atgaccgata atctttttcc taatctagcg catgaaaatt gcaaagaaac
    29401 gatgccccca gtcacaacag aacaattcaa agaagcagcc attctcgaaa agaatcgcaa
    29461 actcgaagaa atcttaaaca tcgttgataa aaagaaacca agtattaaaa aataacgagg
    29521 acctgttcgc gcaggttctt tattttacat ttaattccga gttaactcat aagataagtt
    29581 atatttattt tatttcgctc aaaaatcatg tatactagaa aaaaagacac gtcaggaggc
    29641 ccctacattg gctattttag aacttaattt caaatcagtt tgtttagcta tgcaaacaag
    29701 tgtaacggtg attttgcccg aaacagatgc actttatcat ggctcaattc cgaaatataa
    29761 aacattatat attcttcacg gtttgtcgaa taaccacact acttatgtac gcaatacaaa
    29821 tatcgaacgc tatgccactg aaaaagggct cgctgttgtc atgcccgcag cagatcatag
    29881 cttttattct aacatggttc atggtcgcga cttttttgag tttgttagta cggaactgcc
    29941 gcacgttatg aaaaactggt tcccactttc agataaaaaa gaagatactt ttatagctgg
    30001 tcattccatg ggaggttacg gtgcgttcaa ggttgcactt acttttccag aaaaattcca
    30061 agccgcggcc agtatgtccg gcgtcatgga tattaattat atcattaaag aagactgctt
    30121 cgaaaatttc agcacgcgtg ccatcacggg tgaaatggct agccaaactg gtacggaaaa
    30181 tgatttattt catttattag aaactaatct ccaaaaccaa gtgccattac cagccctttt
    30241 ccaaaattgt ggcacggaag attttctata tgaagataat cttcgtttcc gagattttgc
    30301 gcttgagaaa aatgctccgc tagagtatcg cgaaggcccc ggtgaccatg attgggattt
    30361 ttgggataag agtatcaaag aaattatcga ctggcttcca ctttaataaa aagaagactc
    30421 ggactcacca tccaagtctt cttttttagt gcgtaaatcc gtatgagtcg ttgcgttctt
    30481 tgtcatgata cagcactcta gcatgttcca gattatgaag cgcgtctgca aaatcaaccg
    30541 caaactcttc agccacgtta tagcctaagt ccgcccgaca aacaaaccgt tgaataatcg
    30601 tatcacttaa atcggccgga agtggatagg ctggaacttg ccatcctttc attaaaagct
    30661 gatcagccaa gtcatatagc gtccactcta catccagtcc ttctttcatt ttgtaacaaa
    30721 caatcggtaa attagcgcca tcattaataa tttcaaagta gccacttttt tctacacttt
    30781 ttgccaagta aagggctgtt ttctttgttt tttcatgaat ttctcggtaa ccttcaaaac
    30841 catatcgtaa aaaattataa tattgaccaa taatttgact ggcactacga gagaagttaa
    30901 tcgccatcgt cggcatcgaa ccacctaagt agctgacttc aaatataagc tcttttggta
    30961 aatattcttt gtctttccat aaaatccaac caacgccagg ataaaccaat ccgtatttat
    31021 gaccggaagt atttatagaa acaacatttt taaggcggaa atcccaaggt aattccggat
    31081 ttacaaatgg tgtaaacatc gcgccacttg ctccgtcaac atgaatgact aattgatgct
    31141 cgttcgcttc attatatgct tctacttttt catctaataa ttgaatatca tcaaatttac
    31201 cagtataagt aatgcctaaa atcccgacaa tcccaattgt gtattcatca accaaatcaa
    31261 acactttatc tacatcgata ctgagatgct ctttatccat tggcacaaca cgcatatcta
    31321 catcccagta cacacagaat ttttcccaac atacttggta gcctgatgaa ataattaagt
    31381 tcggtcgttt cgcttgaata tctagacctc gtttttccgc atggttacgc cagcgaaatt
    31441 tcattgccaa accgccaagc atacacgctt ccgaagagcc tactgtcgaa gtccccaagt
    31501 aagacatatc ttttggagca ttccacaaat cggctaaaat attgacgcag cgattttcca
    31561 gttcagctgt ttgcggatat tcggatttat caattgcatt tttctcgagc gtttctgcca
    31621 tcagtatttc tgcctctttt tccatgtatg tctgacaaaa agttgctaag ttttgccgcg
    31681 catttccctc atccatcaac tggtctttca ctagttggta cgcaatacgt ggttccatcg
    31741 gttccttttt taatacatat ttcgggatac tcgtgctttc ttcctcagat ccaaagagtg
    31801 ggattcgata actttcctgt tttcgcttgt cgtcttcact ataaagcatc ttttttcctc
    31861 ctttaaaata actgatcacc ttctctcacc aatacccatt aaaccttaga gacaaaccgt
    31921 tcaatttttc acaataattt gttatactac gatggtactt ataaggaggt tcgttatgtt
    31981 tgatttaatc tttccacttt tacttattat tctcggtgtc atctaccggg tgaatccacc
    32041 taaaaataaa gaaagtcgct ttagttatcg aacgaaagca tctttaaaaa atgaaatctc
    32101 ttggcaaaaa gcgcatcaat ctctaggaat ctactggata gttatcgggg tttctcttct
    32161 agttttgtca cttgtacttg cttttatccc gatgcatgcc tttattcgta gctcgatttt
    32221 attaacaaca agtatttttg ccgtattact ttctgtcatt ttagtagaaa aaaaactaca
    32281 ataaaaaagc accgcgctaa gcagtacttt tctgtaatcc attacatata agtccaaaaa
    32341 aattttactc ttcttttata attgtatttc gttcggtgac acgataaata tgaatagtaa
    32401 ggtagacacg ctcgtctctc gttagttctg tatgatgcgt atttattaaa taggcatcaa
    32461 tttttttcgt acatttaaaa gcttctggat atttaatttg cacttgttca tataaaaagt
    32521 catcgccgga atcgacaatc tcttttcgaa gcaaacgttg cgcgaaatac tgtaaatgtg
    32581 taataaaacg cgtgtaattc agtgaagttt catccaatac cataccataa tgatacgtaa
    32641 caatacttaa aatatcttga acaatttgag tcatcgctac agtcatgtgc atctgttgcc
    32701 catcttgtct agcatttaca atgtgaagcg cgataaaacc agcttcatcc tcatctaaac
    32761 gaattccaac ttcttgctcg ataaaatcta gtgctttcat tcccaccaaa tactctgcgt
    32821 gataaaatcg ttttatttcc cataataatg cgtttttcaa attaatacct tgattatacc
    32881 gtgacacagc gaagttaata tgatcagtta gggtcaaata aatattgtca cttaaatctg
    32941 tttccaaagt ttcttgcgca tactgaacca cgtcatccgc aacacgtaaa tgtttcagtg
    33001 gaatctcact aagtaactca gagagctttt ctgaaagttc atgtgtttcc attacgaatg
    33061 ttttttcaat cttggatacc tccacctcat ctccaagttt cttttgaaaa gcaagaccac
    33121 gacccatcac tacagactcc ttgccacttt taccctcggc gattacaaca ttgttattca
    33181 gtattttttt gataatcatg cattttcacc tctttcaaaa gaaaaaaacc caaactaatt
    33241 ccaatgctat taatatcaaa atagcacttg aattaattca ggttttgccc gccttagcag
    33301 taacaatcct atgcttttct ctaacattat agtacaaaaa gaaaccgatt acaagtggtt
    33361 ttttgatatt caattttggt ttactttata tcttccctac tttaccacaa cttattcatt
    33421 gacatgtagt tttctgcatg ctatttttgg ctggaggtga taaattatgg caacacgctc
    33481 ggaacaaatt tttattaatt tgcctgtaaa agatttacaa gcaaccgtcg cttttttcac
    33541 agaacttggc tacgaattca atccgcaatt cacagacgaa aatgctaccc aaatgctcat
    33601 cggagacaat attttcgcca tgctcttgaa agaagatttc ttccagactt tccataaaga
    33661 aggcatcgct gacacaacaa aagcacgcga agtcctcatc accatcaccc aagatagccg
    33721 ccaagcagtc gatacgctgg tcgatcatgc actaaaaatc ggcgcaaaac cagcaggcga
    33781 aacacaagac tacgacttta tgtatagcag aagttttctt gacttagaca accatctatg
    33841 ggaaatcgct tatttagacg aatccgcttt acaataatta caaaaaaagc cgttggaatt
    33901 catttgattc cagcggcttt cttgaatttc cgtatttttt taatcgccca gtcgtaatga
    33961 cttgatgtgc ttgaaataaa tatggcgcct agtgaagttg tattggtcca tttataatat
    34021 ttttttgtaa atagttcttc ctccgaatgc cctgcaatta aaaccatttc tttgttatgg
    34081 gtttcatcca gtaattccct tgcttgcgct aaatcagtct cttggtattt ctgccaaatg
    34141 accaaattta gctctggtgt cgttttccac gtataacctt ctgctggcat caatggtttc
    34201 tttccaccca ttccaacttc ataccaatcc agcgccatct tatgccattc gtgcaaatgt
    34261 attacgacat cccgaatatt tttatcccgg tcttcaaatg gaaacgtgag ctgttgcttt
    34321 tcttttggaa tagagttgat taaatcgttc aattgttggt acttttccgt gctttgttga
    34381 agtaattcta ctttgttctt tggtcttacc atagaaacat tacccctttc taacaattat
    34441 gtaagtttaa attatcattt tgtcgcttta cgcgagggat ttacatgtca tttccctata
    34501 caataaaggt aacacttttg caaaggatga tggatatgaa aaaaatcgtt atacttatta
    34561 taagcttact attactcgtt gggattggat tcggtgtata ttactttaaa aatgccaatc
    34621 atataggtgc agacgtatca tatgttaaaa tcacaacgga cggcgaaaaa ggcaaaaacg
    34681 taagcttcaa ctattcctat acaatgccag catatgatga agccgggaaa gaaacagaag
    34741 ttactttttc tgcagacaaa aatttacgca aaggtgctta tttaaaattg tatattaaag
    34801 aagacaaagg cgtaacttcc tatgaagaag tcccagaaaa agaagttccc tctaaagcag
    34861 cagaaaaact taaataatca cccaatctcc tccttgcgag gggatttttc atattgaaat
    34921 atatatatct atctcgccac tcgtatgata ccattcaaaa tctgttttgt acgctcgttt
    34981 taattcacta tctcgcgccc aaatcttctg ccaagtttct tccacgcctt tatgactcgc
    35041 attatctaca gaaaaaacta aataatctcc agctttaatt aagacactct tctcttcatc
    35101 ccagtctttt gttcctacca acaaatcata gtcacctttg taatcacttg cataattact
    35161 atataccgca aaaatatctc ctgcaggctt atctaccatt acatcacccc aaagctctgc
    35221 aatcggacta aaattatcat tgtttacacg tatctttttc ccaaaaatct ctatattttc
    35281 ttgtaaaatc attatttgcc gcctcctttt aaaaccatta tagcgaacaa aacctgacaa
    35341 ctatctgtca acaattcaaa ttaaaataaa gtttttccac ttcggatttg tagtcttttt
    35401 gaagcgatgc aggttctaaa attttcacgg cacttccaaa catcaataaa aacgatatta
    35461 tattgcgctc caaatcatag aaaaagctta cacggacata atcgtctcca gtctccattt
    35521 cttcttgcaa aaaataatcc aacaatttcc cgagctgatt tttcggaaat tccaacacaa
    35581 ttttcttcat ttctgcaggc tggtgctccg tttcttcgac gtacataatc gatttaccta
    35641 tttctttcaa agaagttatt cgcgttaatt taaaatgacg aatcgctgct cttttgtggc
    35701 aataggcttc taaataccaa cttccatcca tcaagtttaa tttttgcggc gaaatctccc
    35761 gcgttgtttc cgcgccactc atagcgatat acgtaatttt aagttgttta tttgtcgtaa
    35821 aagctttctg gatataggcg acttttcgtt tcacttctgc ttcaatttgc tggcgatgtt
    35881 gtgtcgctga atcaaagaaa atatgcttac tagttggttt ttcagtctgt aatagcgtga
    35941 ttttttctcg caaaatctcg tggctatcat tcagcataaa ctccgaacgc gcctctaatg
    36001 cctccagcaa aatctgtttt tccgcctccg aaaaagtaaa tgtcgccagc ttatatgtat
    36061 cgagcattgt gaacccgccg ttttttcccg gcaaagcaac aactggaaat cccgcataaa
    36121 gtagcgtatc catatcgcga taaatcgtcc ttgtgcttac ttcaaatttt tcagccagct
    36181 cacttgccag cacttttcgc tccaaaatca tgactagtat tgctaaaatc cgttctagtt
    36241 tcaccccaaa acctccaaca ccttttagtt tattatacca tgcactatta gtgatcaaaa
    36301 acccatgcat atgtgatgga taaaacttct cgcatcattc ctttatactt tgcaaacgtc
    36361 tttgatgttg caggaaggcc tgatgcatca atcccttgac gctttgctaa
//
LOCUS       DASDYO010000007        35880 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.007, whole genome shotgun sequence.
ACCESSION   DASDYO010000007 DASDYO010000000
VERSION     DASDYO010000007.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 35880)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 35880)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..35880
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.007"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            62..211
                     /gene="rpmG"
                     /locus_tag="U0290_000361"
     CDS             62..211
                     /gene="rpmG"
                     /locus_tag="U0290_000361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001265708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEM2300429.1"
                     /translation="MRVNITLECTECGDRNYITTKNKRENPERIELKKYCPRLRRVTL
                     HRETK"
     gene            267..806
                     /locus_tag="U0290_000362"
     CDS             267..806
                     /locus_tag="U0290_000362"
                     /EC_number="6.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-formyltetrahydrofolate cyclo-ligase"
                     /protein_id="HEM2300430.1"
                     /translation="MEDKRLIREKILRNLNSLDRVEHRERSIRLAEKLFLLPEWENAK
                     VVGITLARHPEIETEAIILQAKKEGKTILIPKTYYPSKKMEFKKMDSIHPLIKSKFGI
                     LEPNELAETVDKKVIDLLIVPGVAFNKDHYRIGFGGGFYDRFLTDFQGHTVSLYLYEQ
                     QIEFTPEKHDEPVSILIGG"
     gene            905..2443
                     /locus_tag="U0290_000363"
     CDS             905..2443
                     /locus_tag="U0290_000363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhomboid family intramembrane serine protease"
                     /protein_id="HEM2300431.1"
                     /translation="MSFQEQYVFWRLTNYFLGVEKYRLIHLHEEKQELWLENTSQKKR
                     PVIRIQMKELSWANVVERDVTHTLHVTENLRKQMGRLKLPLVNIYITPFEPMGDISPF
                     FGQSIASPNEKVKLENILLANEQMRDHLDTLVKTLELPEEAFVLPNEITKELVAKERE
                     QVIAYITTKVNEEQKVARNSKPIVTYTFIGLLVVAFLWLSFQGGTTNSFNLIKWGGKF
                     NPLIYAGEWWRFISPIFLHSGLMHLASNAVMLYIVGAWAERIYGKWRYVLILLLGGIC
                     GNIASFALNMNLSVGASTAVFAVMGALLYLVVLKPNLYAKTIGVSIASLVAINLLIDV
                     FSSQIDIAGHIGGLVGGFLLAGALSLPKQFFHWRRLAYGISLFGVAVLFLYFGYQKGE
                     QPYDPMQANVAVQQYLQEQNKKEATKITDNLISSGSADGYSYTYAASIALQDKQIDKA
                     ETMAKEAINIDKDIPEAHYYLSVCYRVKGDMPNAIKEANSARELSSNPFFDSYYDELE
                     KIKE"
     gene            2456..2668
                     /locus_tag="U0290_000364"
     CDS             2456..2668
                     /locus_tag="U0290_000364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqgQ family protein"
                     /protein_id="HEM2300432.1"
                     /translation="MKTVYDVAQLLRKHGIIVYLGKRQYDIEMMEYEITELFKHNILD
                     RETFARARSILKQELIKEQRKNSSLN"
     gene            2693..3661
                     /locus_tag="U0290_000365"
     CDS             2693..3661
                     /locus_tag="U0290_000365"
                     /EC_number="2.7.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family glucokinase"
                     /protein_id="HEM2300433.1"
                     /translation="MNKKLIGVDLGGTTAKLAILTKEGDIEEKWTIDTNIEDKGAHIV
                     KNIGDSINQKLTDLQLDNDIFYGIGMGTPGTVNYETGTVKGAYNLGWADEQNVSQDLE
                     NITGLKIILDNDANVAALGERWKGAGEGGANVVFVTLGTGVGGGIFAEGKILHGIRGA
                     AGEIGHVTVVPENGYDCTCGKKGCLETVASATGIVRVAKDLAKEYTGKSALKDAINND
                     ETITSKLIFELGAEDDALANETIDKISFYLALALSHIGNMLNPEKIIIGGGVSAAGDQ
                     LLTPVKTYFETMVFPAVKESTKLSIATKGNDAGIIGAAWLALPSED"
     gene            3807..4898
                     /locus_tag="U0290_000366"
     CDS             3807..4898
                     /locus_tag="U0290_000366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300434.1"
                     /translation="MKKSNVFLLITLLVGLVFISFGCSEEKETPKKTAKEVQGVQIKT
                     KEFQRVVGWLSKDSVLLQTKKSGVTYFEELNIYNEKKRPIFNTKESISEVQISPDYRN
                     ILLYSAESAEKATMRIIALNDGSTVASRSTKPLTTTFYWNDESPEKIMFVSYSPEWNF
                     QIENWDYTLNQLHKIDVASPFISWYGDNLVISNNKDKPDDELGNLYLQDIRDNATKNL
                     IVANIMQFAVHDNVLLTIEKNSDEKLLYDFRTLGFQNFFSYNAAREYDELGTFVPYFD
                     TNFDKNTFLTFVPYKSAKIGSGAKEYKLVKIDPTNKKESTILELMDNQPILSYEKGDL
                     VLYGYLFDKVIDTKTGKMYNLINTPTKSF"
     gene            complement(4916..5233)
                     /locus_tag="U0290_000367"
     CDS             complement(4916..5233)
                     /locus_tag="U0290_000367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein ComG"
                     /protein_id="HEM2300435.1"
                     /translation="MKTNAFTLPFTIFIALISILIVTGTASIFKTQIQYEKMIQNYYL
                     ASTKLNLAFIEIKETSSLSHQFKINFKGAKIDCQATDNQLTEFNCQITLENGYTLAKT
                     TSP"
     gene            complement(5230..5697)
                     /locus_tag="U0290_000368"
     CDS             complement(5230..5697)
                     /locus_tag="U0290_000368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464867.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComGF family competence protein"
                     /protein_id="HEM2300436.1"
                     /translation="MQKINRKKNVSFRNGSPAFTLLETILSITIILSISSLIPLFFQC
                     YNKTIQISNIDQTTEWQLFLIQTRLELEKATNIQIDRNKLSFSNGKDLITYSKYNDLV
                     RRQVNGKGHEPLLTNVKDYQLIKKEKQLHLTVQDSNTQIYTSVFALPEVVSNP"
     gene            complement(5660..5944)
                     /locus_tag="U0290_000369"
     CDS             complement(5660..5944)
                     /locus_tag="U0290_000369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464868.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEM2300437.1"
                     /translation="MNKINGFSLVESMVSLLLFSMVCSFLLPTAMTIFEKLDYQKETS
                     RVYQEIYEHSELLRHKSVPVNFKDERIESFHYQGGIQICAKNKSEEKCIF"
     gene            complement(5937..6359)
                     /locus_tag="U0290_000370"
     CDS             complement(5937..6359)
                     /locus_tag="U0290_000370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464869.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system protein"
                     /protein_id="HEM2300438.1"
                     /translation="MKINGFTLLEMLLVLTISFTLITLTIFPISSTLSTLREKQLLEE
                     IKATIYYAQINAVATKQDTFISFDPMRNQLITYTNSKTLAILPFSQTLTLTQPKIGNF
                     RFSSTDGSINRFSTIHLTSSTNNYKLIFQIGKGRFRIE"
     gene            complement(6356..6679)
                     /locus_tag="U0290_000371"
     CDS             complement(6356..6679)
                     /locus_tag="U0290_000371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin-type N-terminal cleavage/methylation
                     domain-containing protein"
                     /protein_id="HEM2300439.1"
                     /translation="MFKKKIDWRDERGFTLVEMLIVLLVVSVLLLLTIPNIVSQSKSI
                     NDKGCEAFISMVQGQVQSYQLDKNSIPSVADLVSGGYLKANQKTCPNGNSIKIDSSGN
                     VSEKK"
     gene            complement(6694..7725)
                     /locus_tag="U0290_000372"
     CDS             complement(6694..7725)
                     /locus_tag="U0290_000372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464871.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II secretion system F family protein"
                     /protein_id="HEM2300440.1"
                     /translation="MVFFQRTNWKEDGEFLIRVASLLEKGFSLDATISYLSITSPKYR
                     KRYEQIITSLANGNSFSYALSKNGFPEFICSQLHYASSHGYFLQTIHETGVHMKRKAE
                     EKNALMKTFQYPLVLFSTVILVFFLLRIFLLPKFELLFTQLSTNGTVGTKFTYFLLEK
                     IPVLLGIFLLSLFLIFSFLIRKQKQKNAYDRAYFYCRIPYIRQFSRIHYSQYLSRELG
                     YLLKSGLSITHIMHLFAQEESPAFFQAIARQILPTLEQGLSLTKALEKMPIFERELYY
                     IAIHGEKNGNLAEEFLFYYNLCHQKSLQKTEKLFSFIQPIVFIVIGILIVSIYLSILY
                     PMFSMVNQI"
     gene            complement(7703..8725)
                     /locus_tag="U0290_000373"
     CDS             complement(7703..8725)
                     /locus_tag="U0290_000373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II/IV secretion system protein"
                     /protein_id="HEM2300441.1"
                     /translation="MPQKMTEHIITQALRVHASDVHIHPLSNRYLLRLRVNGTLIPLL
                     YLPIDVGEKLISFLKFQAALDISEKRRPQSGSFEKNTNTEKIAIRLSTMPSKDFHESM
                     VIRIFRYKYPIPFLKSSVFPRSTNQIQQQCKNQTGLFLFSGSTGSGKSSSMYSLVSSI
                     ENKDELQIITIEDPVEHHSPGFLQIEVNEKASITYAPIIRSVLRHDPDILIIGEIRDA
                     ETAKIVVRAALTGHLVLSTVHAGDAYGVLLRLLEFGISSEELAQCLLGISFQKLTHLV
                     CTFCGEKCHPLCTHLHRKRTAIYEVLTQQEIKAYFQSNKQQIKPKYPIKRTFEKGVAY
                     GFFSAH"
     regulatory      9089..9180
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00504"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="glycine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="glycine"
                     /db_xref="RFAM:RF00504"
     gene            9264..10352
                     /gene="gcvT"
                     /locus_tag="U0290_000374"
     CDS             9264..10352
                     /gene="gcvT"
                     /locus_tag="U0290_000374"
                     /EC_number="2.1.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine cleavage system aminomethyltransferase
                     GcvT"
                     /protein_id="HEM2300442.1"
                     /translation="MTELLKTPIHPLYAKYGAKTIDFGGWDLPVQFAGIKAEHEAVRT
                     DAGLFDVSHMGEILVKGPDSTSYLQYLLTNDIEKIKIGKAQYNIMCYETGGTVDDLVV
                     YKKSETEYILVVNAANTDKDFEWMVKNIRGDVSVTNVSSEYGQLALQGPSAEKILAKL
                     TDVDLSSISFFGFVEDADVAGVKTIISRSGYTGEDGFEIYMPSADAGKVFEAILAEGV
                     APIGLGARDTLRLEAVLALYGQELSKDITPLEAGLNFAVKLKKEADFIGKEALIKQKE
                     AGLNRKLVGIELIERGIPRHDYPVFLNEEEIGIVTSGTQSPTLGTNIGLALIDTAYTE
                     IGQEVEVGIRNKKIKAKIVPTPFYKRAK"
     gene            10368..11714
                     /gene="gcvPA"
                     /locus_tag="U0290_000375"
     CDS             10368..11714
                     /gene="gcvPA"
                     /locus_tag="U0290_000375"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPA"
                     /protein_id="HEM2300443.1"
                     /translation="MAKHRYLPMTEQDEKEMLDVIGVKSIDDLFQDIPEKIRFKRDYD
                     LKPAKSEPALLRELSKLASKNANTTEYASFLGAGVYSHYIPTVVDHVISRSEFYTAYT
                     PYQPEISQGELQAIFEFQTMIAELTGMDLANSSMYDGGTALAEAAMLASGHTKRKKIL
                     ISGAVHPESSNVLKTYATGQHIEVEVIPELDGKTDIEALKKALSDDIAGFVVQYPNFY
                     GQVEPLAELEKLVHENNSLLLVSSNPLSLGLLTPPGEFGADIVVGDSQVFGIPESFGG
                     PHCGFFAVTNKLMRKVPGRLVGETVDENGKRGYVLTLQAREQHIRRDKATSNICSNQA
                     LNALASSVAMATLGKTGLVEMAKQNLDKSHYAKQKFREKGFEVLFSDGFFNEFVVKLS
                     KPIKEVNESLLDEGIIGGYDLGFYEEKYENHMLVAVTEMRTKEEIDAFVASLEGAK"
     gene            11711..13177
                     /gene="gcvPB"
                     /locus_tag="U0290_000376"
     CDS             11711..13177
                     /gene="gcvPB"
                     /locus_tag="U0290_000376"
                     /EC_number="1.4.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminomethyl-transferring glycine dehydrogenase
                     subunit GcvPB"
                     /protein_id="HEM2300444.1"
                     /translation="MNLEETMPLVFERSIPGRIGFSLPESDVPETKASDYFEQAYIRS
                     VPADLPELSELEIMRHYTNLSNHNFGVDSGFYPLGSCTMKYNPKINEKVARFPGFANI
                     HPNQPESSVQGALELLYDLQTSLVEITGMDEVTLQPAAGAHGEWTGLMLIRAFHEKNG
                     DTKRTKVIIPDSAHGTNPASAAVAGFDVVTVKSNEKGLVDVADLKKVVGEDTAALMLT
                     NPNTLGLFEKDIVEMAEIVHEAGGKLYYDGANLNAIMAKVRPGDMGFDVVHLNLHKTF
                     TGPHGGGGPGSGPIGVKKELIPFLPTPVLTKKEEGYTFDYNYPDSIGRVKPYYGNFGI
                     NVRAYTYIRTMGPDGLKLVTEYAVLNANYMMRKLQEAYDLPFDQVCKHEFVLSGNRQK
                     KLGVRTVDIAKRLLDHNFHPPTVYFPLIVGEAIMIEPTETESKETLDSFIDTMLKIAK
                     EAEENPEIVQEAPHSTYVKRLDETRAARKPILRYQKEV"
     gene            complement(13218..13598)
                     /locus_tag="U0290_000377"
     CDS             complement(13218..13598)
                     /locus_tag="U0290_000377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEM2300445.1"
                     /translation="MISWIIAIIILVILLGYEIYQFVMRRKAVKVLTEEEFKKGYRKA
                     QLIDVREPNEFDAGHILGARNIPVTQMKNRTTEIRQDLPVYLYCQTAQRSNRAAIMLY
                     KRGYKQVYQLKGGYRKWTGKTKSK"
     gene            complement(13660..13932)
                     /locus_tag="U0290_000378"
     CDS             complement(13660..13932)
                     /locus_tag="U0290_000378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300446.1"
                     /translation="MKKYPLIVIILLALVGIGLLMGGFKSFFTLIISVLIGALIFTLL
                     LRFFTNRKTDSNYQKAVKQSKNLHDPKKKTKKKRKSSFKVIDGGKK"
     gene            complement(13945..14910)
                     /locus_tag="U0290_000379"
     CDS             complement(13945..14910)
                     /locus_tag="U0290_000379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1385 domain-containing protein"
                     /protein_id="HEM2300447.1"
                     /translation="MSKQNVPSYGGQAVVEGVMFGGRKQTVTAIRRIDGSLEYFYLEK
                     NSPVWVMRMKKIPFLRGIVALIESSAIGSKHLAFATDRYDEDPNNPVEEEKIEKKESK
                     VAMWLGVAVIGILSFVFAKFVMTLIPVFLAELFRPIVPGDTAQVFLESLFKLILLLTY
                     IFAVSQTPIIKRVFQYHGSEHKVINCYEENLPLTVENVQKQSRLHYRCGSSFILFTVI
                     VGMFIYLLVPTDPLWLRVVDRILLIPVVLGVAFEVLQLTNKCRNIPVLKYLGVPGLWL
                     QLLTTKEPSDDQVEVAIASFNELLRVEKEGAPVDVAEPENLELLE"
     gene            15090..16151
                     /locus_tag="U0290_000380"
     CDS             15090..16151
                     /locus_tag="U0290_000380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEM2300448.1"
                     /translation="MSKLTKIQETLGKEKIEAVLVTSEFNRRYVSGFTGTSGVALILP
                     EKAYFVTDFRYTEQAAKQAEGYEIVQHTGPIFDTVEDLLIKNDTKTLHFEADYVTVSE
                     FKQMERVFNRQLIPLTGFFEEMRKVKTASELKAIRTACDIADAAFAHIIQFIKPGMAE
                     IEVSNELEFFMRRAGATSSSFDTIVASGVRSALPHGVASDKKIEVGDFVTMDYGCYYD
                     GYCSDMTRTIAVGEPAEKLKEIYQITLDAQLKVIDSLKPGMTGIEADAIARDYISSFG
                     YGDAFGHSLGHGIGLEIHEGPNLSFKSPQKLEVGHVVTDEPGIYLPGIGGVRIEDDLL
                     ITETGNEILIHSPKELIIL"
     gene            16254..16811
                     /gene="efp"
                     /locus_tag="U0290_000381"
     CDS             16254..16811
                     /gene="efp"
                     /locus_tag="U0290_000381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011231892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor P"
                     /protein_id="HEM2300449.1"
                     /translation="MISVNDFKTGLTIEVDNGIWRVLDFQHVKPGKGAAFVRSKLRNL
                     RTGAIQEKTFRGGEKVAKAQIDNRKMAYLYADGTNHVFMDNESYEQIELPEDQIAHEL
                     KFLKENMEINIIMYQGETIGIDLPNTVELVVTATDPGIKGDTSSGGSKPATLETGLVV
                     QVPFFVNEGDKLVINTTEAAYVSRA"
     gene            16970..17449
                     /gene="accB"
                     /locus_tag="U0290_000382"
     CDS             16970..17449
                     /gene="accB"
                     /locus_tag="U0290_000382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxyl carrier
                     protein"
                     /protein_id="HEM2300450.1"
                     /translation="MLSIDEIKQLIELIDESTLDEFELETKDSKILLKKNKTVVAAAV
                     QEAPIAITQAPAQAAPVAQAQTAAPQTEANTAEDASLEVITSPMVGTFYASASPEDAN
                     FVSVGSKVSAQSVVCIVEAMKLFNEITADIDGEIAEILVSSGELVEFGQPLFKVRKK"
     gene            17463..18827
                     /gene="accC"
                     /locus_tag="U0290_000383"
     CDS             17463..18827
                     /gene="accC"
                     /locus_tag="U0290_000383"
                     /EC_number="6.3.4.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase biotin carboxylase
                     subunit"
                     /protein_id="HEM2300451.1"
                     /translation="MIKKVLVANRGEIAVRIIRAAKELGVETVAIYSEADKEALHIQL
                     ADEAYCVGPAATKDSYLNMSNIISLAVLTNCDAIHPGYGFLAENADFAELCEDCNITF
                     IGPSASAISQMGTKDVARETMRKAGVPIVPGSQGIVKDVEDGKKIAKKIGYPVIIKAT
                     AGGGGKGIRVAENEEKLISGIQTTQQEAEAAFGDPGVYLEKYIQDFRHVEIQVLADNH
                     GNVIHLGERDCSIQRRLQKLIEESPSPAIDEKTRQKMGKAAVKAAKAVNYSGAGTIEF
                     IFDHHENNFYFMEMNTRIQVEHPVTELVTGVDLVKQQFLVASGEELQIKQADVKLTGW
                     AMECRINAENPEKNFMPAPGEIKFYLPPGGLGVRIDSAAYPNYKIPPYYDSMIAKVIC
                     YAETREEVIQKMKRALSEFAIDGIPSTIPFHLRVLDNDVFLSGDFNTKFLEQNDVMNL
                     SKEG"
     gene            18831..19238
                     /locus_tag="U0290_000384"
     CDS             18831..19238
                     /locus_tag="U0290_000384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HEM2300452.1"
                     /translation="MAYTKDLRKQNDAPLGKIEIAPEVIGVIAGLAASEIENVAYMQG
                     GFATEMREKFSGAVNYRKGVKVELTEEGILIELYCSVLFGATIPLVAQNIQDAVRDTI
                     FNMTGLNVLEINVHIVGVQFEKTETLSFDDFEL"
     gene            19269..19655
                     /gene="nusB"
                     /locus_tag="U0290_000385"
     CDS             19269..19655
                     /gene="nusB"
                     /locus_tag="U0290_000385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antitermination factor NusB"
                     /protein_id="HEM2300453.1"
                     /translation="MKRREAREKALQALFQIELNEMSLDQAIKNIMEDEQDDYMEKLV
                     EGVMANKAEIDAIIEPNLDNWRMDRLSKVDLSLLRLSVYEIKYLDDVPNRVSLNESIE
                     IAKIYSDEKSSKFINGVLANIAPEDK"
     gene            19752..20606
                     /gene="folD"
                     /locus_tag="U0290_000386"
     CDS             19752..20606
                     /gene="folD"
                     /locus_tag="U0290_000386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional methylenetetrahydrofolate
                     dehydrogenase/methenyltetrahydrofolate cyclohydrolase
                     FolD"
                     /protein_id="HEM2300454.1"
                     /translation="MGEIIDGKKLAKEIQEKVTREVAELVKEGKKPGLAVVLVGDNQA
                     SRTYVRNKQKRTEEAGMKSVLIELPENVTEEKLLSVVEELNEDKTIHGILVQLPLPEH
                     ISEEKVIDTISYDKDVDGFHPVNVGNLFIGKDSFVPCTPAGIIELIKSTGTQIEGKRA
                     VVIGRSNIVGKPVAQLLLNENATVTIAHSRTKDLPQVAKEADILVVATGLAKFVKKDY
                     IKPGAIVIDVGMDRDENNKLCGDVDFDDVVEEAGFITPVPGGVGPMTITMLLANTLKA
                     AKRIWKMN"
     gene            20625..21977
                     /locus_tag="U0290_000387"
     CDS             20625..21977
                     /locus_tag="U0290_000387"
                     /EC_number="3.1.11.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII large subunit"
                     /protein_id="HEM2300455.1"
                     /translation="MEQDKYLTVAAITKYIEKKFEVDPYMKQVFVRGEISNLKQPASG
                     HLYFTVKDEFAMLRSVMFHKAVQKIGFVPEDGMNVLITGRIGVFTKAGRYQFYAEHME
                     PDGVGALYIQLEQLKSQLEKEGLFAETHKKVLPSFPSKVAVVTSKTGAAVRDILTTIH
                     RRMPSVEVIVYPTIVQGEKAAQKIVENIGKINQRNDIDVMIIGRGGGSLEELWAFNEE
                     PVVRAVYDSDVPVISAVGHETDFALSDFSADVRAATPTAAAELAVPDYRDLEERLAER
                     KYRLLAVTRQELERKERSLEQLKQHLILNGPKHQLEQQMERTDYFSERLNNAFSKQIF
                     VKQTVFDRLNDRLHYYHPNKEIELQKEQMALRLQALEKAMKQLLKDKQQSFFRQIDAL
                     EHLSPLSLLKRGFGVTYKENMLVKSVQELEVGDNIQVKMQGGQIEALITAKEEDISGN
                     "
     gene            21967..22194
                     /locus_tag="U0290_000388"
     CDS             21967..22194
                     /locus_tag="U0290_000388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease VII small subunit"
                     /protein_id="HEM2300456.1"
                     /translation="MATKKKTFEEAIAELETIVEALENGSASLEDSLDMYQKGIELTK
                     LCQDKLQSAEKRMAKVVTDAGEEIPFEADGE"
     gene            22197..23078
                     /locus_tag="U0290_000389"
     CDS             22197..23078
                     /locus_tag="U0290_000389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEM2300457.1"
                     /translation="MQDLTLFLEQYKKVIDESLFKEISERNIEPRLKESMLYSVQAGG
                     KRIRPMLVFATLQALKVNPLLGVKTATALEMIHTYSLIHDDLPAMDNDDYRRGKYTNH
                     KVFGDATAILAGDALLTLAFSILAEDENLSFETRIALINQISFSSGAEGMVGGQLADM
                     EAENKQVTLEELSSIHARKTGELLIFAVTSAAKIAEADPEQTKRLRIFAENIGIGFQI
                     SDDILDVIGDETKMGKKTGVDAFLNKSTYPGLLTLDGAKRALNEHVAIAKSALSGHDF
                     DDEILLKLADLIALREN"
     gene            23277..23477
                     /locus_tag="U0290_000390"
     CDS             23277..23477
                     /locus_tag="U0290_000390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein"
                     /protein_id="HEM2300458.1"
                     /translation="MEQGTVKWFNAEKGFGFIERENGDDVFVHFSAIQGDGFKSLDEG
                     QAVTFDVEEGQRGPQAANVQKA"
     gene            23644..25473
                     /gene="dxs"
                     /locus_tag="U0290_000391"
     CDS             23644..25473
                     /gene="dxs"
                     /locus_tag="U0290_000391"
                     /EC_number="2.2.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate synthase"
                     /protein_id="HEM2300459.1"
                     /translation="MSCFYLDLLKIKDPSFMKQLDIQELEALAADIRAFLITSTSKSG
                     GHIGPNLGVVELTIALHYSFNSPKDKFIWDVGHQSYVHKILTGRASQFGTLREHGGLD
                     GFPKRKESIHDVFETGHSSTSLSAAAGMVIARDIKKEEFYVIPIIGDGALTGGMALEA
                     LNHIGDMGKDMIVILNDNDMSIAPNVGAIHNILGKLRTSDTFKQTKAKVDGTFFEELG
                     FMYLGPINGHDIEEVITNLELAKRTKGPVLLHIVTKKGKGYQPAELDSRGTWHGTGPY
                     KVETGSFIKPAKRAASWSSVISNELIRLAEKDERIVAITPAMPVGSKLEKFAKAFPER
                     FFDVGIAEQHATTMAAGLATQGMKPFLTIYSTFLQRAYDQLVHDVCRQKLNVVIGIDR
                     AGLVGADGETHQGIFDISFLNSIPNMTISMPKDEVEARQLMDTAFSYNDGPFAIRYPR
                     GEAPGAQVAESNTLIPIGKWETIIQPIDAVILTFGPTIRLALKAAEQLELEGYHVGVI
                     NARYIKPLDEALLHQILKQKIPILTVEESLLKGGFGASVLEFIEASNYSDVVMHRIGL
                     PDEFISHGSVSIILESFGISTTGIVLKIKEMLAQSGKLRAKRL"
     gene            25470..26294
                     /locus_tag="U0290_000392"
     CDS             25470..26294
                     /locus_tag="U0290_000392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TlyA family RNA methyltransferase"
                     /protein_id="HEM2300460.1"
                     /translation="MTIKKERADILLVEQGLFETREKAKRAIMAGIVYRKEERVDKPG
                     EKIPIDSELQVKGKQMPYVSRGGLKLEKALQVFDFEVKDKLMLDIGASTGGFTDCALQ
                     NGARHSYALDVGYNQLAWKLRNDDRVTVMERTNFRHVTPADFSEGLADFATIDVSFIS
                     LKLILPVLRTVLVTGGDVMTLIKPQFEAGREQVGKKGIIRDPAVHESVVEHIVQFALD
                     NGYDLMGLDFSPITGGEGNIEFIAHLKWTGGETGTNHLEPNAIAKLITKAHTKLDK"
     gene            26485..26934
                     /gene="argR"
                     /locus_tag="U0290_000393"
     CDS             26485..26934
                     /gene="argR"
                     /locus_tag="U0290_000393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ArgR"
                     /protein_id="HEM2300461.1"
                     /translation="MNKGHRHIIIRELITSNEIDTQEDLVELLLERDVKVTQATVSRD
                     IKELHLVKVPTQTGGYKYSLPADNSFNPHQKLKRALIDCFIGIDNVQFMIILKVMPGN
                     GNSVGALIDNLDWPEKAGTICGDDTCLIICRSEENAKTLTDRFIDML"
     gene            26957..28648
                     /gene="recN"
                     /locus_tag="U0290_000394"
     CDS             26957..28648
                     /gene="recN"
                     /locus_tag="U0290_000394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecN"
                     /protein_id="HEM2300462.1"
                     /translation="MLQEMTIKNFAIIESLSLTFQEGMTVLTGETGAGKSIIIDALGL
                     LVGGRGSADFIRHGEERLELQGLFALAEDNLACRNALIENGIDASDDMVVLERSLFRS
                     GKNSCRINGKLVTTVLLRQIGSKLIDIHSQHEHQELMNEEFHLSLLDRFASDKIKPAL
                     TKYQTNFKEYQTIEKEWQNWTKNERELAQRLDMLRFQQQEIENANLQAGEEDRLLEQK
                     NILANFEKLNENLQGAYAAIQGEPGGLEFVGEAMRQMEAAASIHTDYKAVSEAISSSY
                     YMLEDSMSQIRQSLDQLEFQPEELNQIESRLNDLNQLKRKYGKTIEDIIQYEQEISSE
                     MEKLTDSESHVGHLETKLATLKAELTKQANTLTEIRKKAAVTLEKQIKQELNHLYMEK
                     AIFSVRFEANKMELTDSGQDSVVFYMSTNPGEPLKPLAKIASGGELSRMMLALKTIFS
                     RHQGITSIIFDEVDTGVSGRVGQAIAEKIYAVSVGSQVLCISHLPQVAAMANHHYYIT
                     KKVQNKRTTTSVTVLKGEEKVEEISRMIAGIEVTELTKQHAKEMIEQAEKVKQTY"
     gene            28778..29644
                     /locus_tag="U0290_000395"
     CDS             28778..29644
                     /locus_tag="U0290_000395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEM2300463.1"
                     /translation="MTKSRFFSDVIETSSFVFAVAGADDEVVLETIRLALNQNLGKFL
                     LFGKKEDKTLTANENVTWIQTDTAEAAAQGAILAVKNKEADILVKGFIPTATLMHHVL
                     KKENGLRTDQLLSQIAIFDIPTYHKPLLITDCAMNVAPKTKEKIAITENAIAVAHQIG
                     IANPKIALLSAVEEVTAKMPSTVEAQEVVQHFDNTIAVSGPLALDVAISKEAALHKGI
                     TDSSAGEADILIAPNIETGNALYKSLVYFAGAKVGSAVVGAKVPIVISSRNDSPENKL
                     ASFILTVRLVEK"
     gene            29781..30848
                     /locus_tag="U0290_000396"
     CDS             29781..30848
                     /locus_tag="U0290_000396"
                     /EC_number="2.7.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="butyrate kinase"
                     /protein_id="HEM2300464.1"
                     /translation="MSFDVLTINPGSTSTKLAVYQGDKVLFEETVRHTMQELADFNNV
                     QEQFDFRWQVLRRVMDAYGYDVKKLQAVVGRGGLLRPVAGGTYMVTEKMIDDLKENKY
                     GEHASNLGALLAKKLADELTIPSFIVDPVVVDEMQEIARISGNAFIARKSIFHALNHK
                     AAGRKIAKELGKDYEKMNFVIAHLGGGISVAAHRQGKAVDVNNALDGDGPFSPERSGS
                     LPMNDFLEACFSGKWTKRELHELIVGRGGMISYLGTNSMLEVEAKVQAGDVKAIEAFD
                     AMAYQVSKEIGACSVVLQGKVDAIILTGGLARSELFTNKIIEQTNWITSVIIEPGEDE
                     LEALNSGVQRVLAGLEKEKEY"
     gene            30863..32290
                     /gene="lpdA"
                     /locus_tag="U0290_000397"
     CDS             30863..32290
                     /gene="lpdA"
                     /locus_tag="U0290_000397"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEM2300465.1"
                     /translation="MATEYDVVILGGGTGGYVAAIQAAKNGQKVAVVEKGKVGGTCLH
                     RGCIPTKALLRSAEVLQTVKKASEFGISVEGTAGINFLQAQERKQAIVDQLEKGIHQL
                     FKQGKIDLFVGTGTILGPSIFSPTAGTVSVEFEDGSENEMLIPKNLIIATGSKPRTLN
                     GLSIDEENVLSSDGALNLETLPKSIIIVGGGVIGMEWASMMHDFGVEVTVLEYADRIL
                     PTEDKEVAKELARLYKKKKLIMHTSAEVQAASYKKTDTGVEIKAIIKGEEQTFAADKI
                     LVSVGRSANTENIGLQNTDIATENGFIQVNDFYQTKESHIYAIGDCIPTIQLAHVAME
                     EGTIAANHIAGKVAEKLDYDLVPRCIYTSTEIASVGITEEQAKERGYEVKKGKFFFRG
                     IGKALVYGESDGFIKIIADKKTDDILGVSMIGPHVTDMISEAALAQVLNATPWEVGNT
                     IHPHPTLSESFREAALAVDGNAIHG"
     gene            32315..33310
                     /locus_tag="U0290_000398"
     CDS             32315..33310
                     /locus_tag="U0290_000398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine pyrophosphate-dependent dehydrogenase
                     E1 component subunit alpha"
                     /protein_id="HEM2300466.1"
                     /translation="MTLKEAGLTEDKLIKMYETMLMARRLDERMWLLNRSGKIPFTIS
                     GQGQETAQIGAAFAFDLDKDYALPYYRDLAVVLAFGMTAKDIMLSAFAKAEDPNSGGR
                     QMPAHFGQKSNRIVTQSSPVTTQFPHAAGIGLAAKMAGDEIAIYASTGEGSSNQGDFH
                     EGINFASVHKLPVVFVIHNNQYAISVPASKQYAAEKLSDRAIGYGIPGERVDGTNMGE
                     VYAAFKRAADCARNGEGPTLIETVSYRFTPHSSDDDDSSYRSREEVDEAKGKDPLKIF
                     QAELLEEGYLTEEKIAEIEKSIAKEVNEATDYAESAAYAEPESSLLYVYDEEANS"
     gene            33327..34310
                     /locus_tag="U0290_000399"
     CDS             33327..34310
                     /locus_tag="U0290_000399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEM2300467.1"
                     /translation="MPVISYIDAITMALKEEMERDDKVFILGEDVGKKGGVFKATAGL
                     YDEFGEDRVLDTPLAESAIAGVGIGAAMYGYRPVAEMQFADFIMPAVNQIISEASRIR
                     YRSNNDWSCPIVIRAPFGGGVHGALYHSQSVEKVFFGQPGLKIVVPSSPYDAKGLLKA
                     AIRDNDPVLFFEHKRAYRLLKGEVPETDYIVPIGEANVVREGDDITVITYGLAVQFAQ
                     QAAERLAAEGVEAHILDLRTIYPLDQEAIIEATKKTGKVLLVTEDNKQGSIISEVAAI
                     ISEHCLFDLDAPIARLAGPDTPAMPFAPTMEKHFMINPDKVADAMKELAEF"
     gene            34341..35591
                     /locus_tag="U0290_000400"
     CDS             34341..35591
                     /locus_tag="U0290_000400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-oxo acid dehydrogenase subunit E2"
                     /protein_id="HEM2300468.1"
                     /translation="MAVEKITMPKLGESVTEGTISSWLVKPGDTVEKYDAIAEVLTDK
                     VTAEIPSSFSGTIKEILAEEDETLEVGEVICTIETADAGSSEPVAEVEQTETKAPEKQ
                     ETKQVKLADAPASGRFSPAVLRIAGENNIDLSTVEGTGKGGRITRKDLLQVIENGPVA
                     KREEMKSAPQEKAAMPTPPVRSAAGDKEIPINGVRKAIAKHMSVSKQEIPHAWMMVEV
                     DATGLVRYRNAVKDSFKKEEGYSLTYFAFFIKAVAQALKEFPQLNSTWAGDKIIEHAN
                     INISIAIAAGDLLYVPVIKNADEKSIKGIAREISELAGKARNGKLSQADMEGGTFTVN
                     STGSFGSVQSMGIINHPQAAILQVESIVKRPVIIDDMIAVRDMVNLCLSIDHRILDGL
                     LAGKFLQAIKANVEKISKENTALY"
     gene            complement(35748..35843)
                     /gene="prli42"
                     /locus_tag="U0290_000401"
     CDS             complement(35748..35843)
                     /gene="prli42"
                     /locus_tag="U0290_000401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003722501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stressosome-associated protein Prli42"
                     /protein_id="HEM2300469.1"
                     /translation="MTNKKVVRVVVILMLIAIVLSSVLTGVLMFL"
BASE COUNT        12144 a         5911 c         7449 g        10376 t
ORIGIN      
        1 aatgatatta ttatacaggt ttagtaaata aattcgtcag tcggagttgg agggaaaaat
       61 aatgcgcgtt aatattactt tagaatgcac tgaatgcggt gatcgtaatt acatcactac
      121 taaaaataag cgtgaaaatc cggaacgtat tgaattaaaa aaatattgtc caagattacg
      181 ccgtgtaact ttacaccgcg aaactaagta agcagcagga tctccattct gttgcttttt
      241 ttattaacaa aaagggggaa gccaaaatgg aagacaaacg actgatacgc gagaaaatct
      301 tacggaattt gaatagcctt gatagagtag aacatcgcga acgttctatt agattagcgg
      361 aaaaactatt tttattacca gaatgggaaa atgcaaaggt tgttggtatc acattagcaa
      421 gacaccctga aatcgaaaca gaagcaatca tcctacaagc aaaaaaagaa gggaaaacca
      481 ttttaattcc aaaaacatat tatcctagca aaaaaatgga gtttaaaaag atggattcga
      541 tacatccttt aataaaatct aagtttggta ttttagaacc aaatgaatta gcagaaacag
      601 ttgataaaaa agtaattgac ttactaattg ttcctggagt tgcctttaat aaagatcatt
      661 atagaatcgg ttttggcgga ggattttacg atagattttt aacggatttt caaggacata
      721 cagtgtcctt gtacctttat gaacaacaaa tagagtttac acctgaaaag catgacgaac
      781 cagtttctat tttaattgga ggataaggaa aaataattct atagaaaata gggtggattg
      841 tttacaacac cctttttttt gcgtatagta gtaaatataa tttgtaatga aagcagggaa
      901 ttttttgagc ttccaagaac aatatgtctt ctggcgccta actaattatt tcttgggtgt
      961 tgaaaaatac cgtttaatcc atcttcacga ggagaaacaa gaactttggt tggaaaatac
     1021 aagccagaaa aaaagaccag tcatccgtat acagatgaaa gaattaagtt gggctaatgt
     1081 ggtggaacgt gatgtgacac acactttaca cgttaccgaa aatcttcgta agcaaatggg
     1141 gcgcttgaaa ttgcctcttg tgaatattta tataacacca tttgaaccaa tgggtgatat
     1201 ttcgcctttt tttgggcagt caattgcttc tccaaatgaa aaagtgaaat tagaaaatat
     1261 tttactcgcg aacgaacaaa tgagagatca tctagacaca ctcgttaaaa ctttagaatt
     1321 accagaagaa gcatttgttc ttccaaatga aataacgaaa gagctagtag caaaagaacg
     1381 agagcaagta atcgcgtata ttactactaa agtaaatgaa gaacaaaaag ttgctaggaa
     1441 ttcaaaacca atagttacgt atacgttcat tggtcttttg gttgtagcgt ttttgtggct
     1501 ttctttccaa ggtggaacta ccaattcatt taacttaatt aaatggggcg ggaaattcaa
     1561 cccacttata tatgctgggg aatggtggcg ctttatttca ccgatttttc ttcatagtgg
     1621 attaatgcat ttagcttcca atgcagttat gctttatatt gtaggtgctt gggcagagcg
     1681 tatttatggt aaatggcgat atgttctaat tcttctctta ggaggaatat gcggaaacat
     1741 agccagtttt gcattaaata tgaatttatc tgttggtgca agtactgcag tatttgcagt
     1801 aatgggcgcg ttactttatt tggttgtttt aaaaccaaat ctttatgcaa aaacaattgg
     1861 cgtcagtatc gcgtcacttg tcgcaattaa tttgttaatt gatgtatttt ctagtcagat
     1921 tgatattgct ggacatattg gtggtcttgt aggtggtttc ttgcttgccg gagcattatc
     1981 gttaccaaaa caatttttcc attggcgacg acttgcatat ggcatttcac tttttggtgt
     2041 agctgtttta tttttgtatt ttggctacca aaaaggagaa caaccatatg atccgatgca
     2101 ggctaatgta gcagtacaac aataccttca agaacaaaat aaaaaagaag caaccaagat
     2161 taccgataat ttaatttcta gcggaagtgc tgacggctat tcatatacgt atgctgcatc
     2221 tatcgcttta caagataagc aaatagacaa agcagaaaca atggctaaag aagcaattaa
     2281 tatcgacaaa gacatcccag aagctcatta ttatttatct gtttgctata gagtaaaagg
     2341 cgatatgcca aatgcaatta aagaagcgaa cagcgctaga gagttatcaa gcaatccatt
     2401 ttttgattct tattacgatg agttagaaaa aatcaaagaa taagaggttt ttaatgtgaa
     2461 aacagtttat gatgttgccc aattactaag aaagcatggc attattgttt atttaggaaa
     2521 acgacaatat gacatcgaaa tgatggaata tgagataaca gaacttttta aacataatat
     2581 tttagataga gaaacttttg ctagagctag aagtatattg aaacaagaat taattaaaga
     2641 acaacgaaaa aatagtagtt taaattaaat tgattataag gagaacagca gaatgaacaa
     2701 aaaattaatt ggtgtagatt taggcgggac aacagcaaaa ttagctattt taacaaaaga
     2761 aggcgacatt gaagaaaaat ggacaattga tacaaatatt gaagataagg gcgcccacat
     2821 tgttaaaaac attggggatt ctatcaatca aaaattaacg gacttacaac tggataatga
     2881 tattttttat ggtattggta tgggaactcc aggtactgta aattatgaaa caggtactgt
     2941 aaaaggtgcg tacaacttag gctgggcaga tgaacaaaat gttagtcaag atttagaaaa
     3001 tattactggt ttaaaaatca tattagataa tgatgctaat gttgcagctc ttggtgaacg
     3061 ctggaaaggc gcaggcgaag gtggggctaa tgtcgttttc gtaacacttg gaacaggcgt
     3121 tggcggcgga attttcgcag aaggcaaaat tttacatggt attcgcggag cagctggtga
     3181 aattgggcat gtaacagtag ttcctgagaa tggttatgat tgtacctgtg gcaaaaaagg
     3241 ctgtttagaa actgtcgcat cagcaacagg aatcgttcga gtagcgaaag atttagcgaa
     3301 agagtatact ggtaaatccg cacttaaaga tgcaataaac aacgatgaaa caattacttc
     3361 taaattgatt tttgaactag gagcagaaga tgatgcttta gcaaatgaaa caattgataa
     3421 aatttctttc tatttggctt tagcgctcag tcatattgga aacatgttaa atccagagaa
     3481 gattattatt ggtggtggcg tttcagcagc aggcgatcaa ttattaacac cggttaaaac
     3541 ttattttgag acaatggttt tcccagctgt taaagaatcc actaaattat ctattgcgac
     3601 aaaagggaat gacgcaggga taattggagc tgcatggtta gcactaccaa gtgaagatta
     3661 atattaatat taattttaat ttgtataagc tacaataaca ctccattatt gtagcttgtt
     3721 ttataaagct aatctttcta taacgcattg ttttagcttc ctttgaaaag ggtaaaattt
     3781 tagcatagag agattggagg ccagagatga aaaaatcaaa tgtttttttg ctgattacct
     3841 tattagtcgg attggttttt atctcttttg gttgctcgga ggaaaaagaa acgccaaaaa
     3901 agactgcaaa agaagtacaa ggtgttcaaa tcaaaaccaa agaattccag cgagtagttg
     3961 gttggttgtc aaaagattct gttttgctgc aaaccaaaaa atctggagtt acgtattttg
     4021 aagaattgaa tatatataat gaaaagaaaa gaccaatctt taatacgaag gaatctattt
     4081 ctgaagtgca aattagtcca gactatcgaa atatcttact ttattctgct gaatcagctg
     4141 aaaaagccac gatgcgaata atcgctttga atgatggttc aactgttgct tcacgttcaa
     4201 caaagcctct aacgacgaca ttttattgga atgatgagtc acctgaaaaa atcatgtttg
     4261 tctcatatag tccagaatgg aattttcaaa tagaaaattg ggactatacg ttgaatcaac
     4321 tgcataaaat agatgtcgcg tcacctttta tttcctggta cggagataat ttggtgattt
     4381 cgaacaataa agacaaaccg gatgatgaat taggaaacct ttatttacaa gacattagag
     4441 ataacgctac taaaaattta attgtagcta atattatgca atttgctgtt cacgataatg
     4501 tactgcttac tattgaaaaa aactctgatg aaaaattatt atacgatttt agaacactgg
     4561 gatttcaaaa tttcttttcg tataatgctg cacgagaata cgatgaatta gggacttttg
     4621 ttccgtattt tgatacaaat tttgataaga atacttttct aacatttgtt ccatataaaa
     4681 gcgctaaaat tggcagcgga gcaaaagagt ataagttagt aaaaattgat ccaacgaaca
     4741 aaaaagaatc gactatcttg gaattaatgg ataaccaacc tattttatct tatgaaaaag
     4801 gggatttagt tctctatggt tatttatttg ataaggtaat cgatacgaaa acaggtaaaa
     4861 tgtataattt aattaataca ccaactaaat ctttttaaaa caacgagttc cttctttaag
     4921 ggctcgttgt ttttgctaat gtatagccgt tttctagtgt gatttgacag ttgaattctg
     4981 ttagttgatt atccgtcgcc tggcaatcta tctttgcgcc tttgaaattt attttaaatt
     5041 gatgtgaaag tgaggatgtt tccttaattt ctatgaaagc taaatttagt ttagtggagg
     5101 ctaaataata attttgaatc attttttcat attgtatttg tgtcttaaag atagaagcag
     5161 taccagtaac gattaaaatt gaaataagcg caatgaaaat ggtaaatggg agcgtaaatg
     5221 cattagtctt catggattgg ataccacttc tggtaatgcg aatacagatg tatatatctg
     5281 agtattagag tcttgcaccg ttaaatgaag ttgtttttct ttcttgatta attgataatc
     5341 tttcacatta gtaagcaatg gttcatgtcc ttttccattt acttgtcgac gaactaaatc
     5401 attatatttg gaataggtga taagatcttt gccattacta aaagaaagct tattcctatc
     5461 aatctgaata ttagtcgctt tttctaattc tagacgagtt tgaatgagaa aaagttgcca
     5521 ttctgttgtc tgatcaatgt tactaatctg gatagtcttg ttatagcatt gaaaaaataa
     5581 tggaatgagc gagctaatac ttaaaatgat cgtaatagac aagattgttt caagaagagt
     5641 gaaagcaggt gagccatttc taaaagatac atttttcttc cgatttattt tttgcacaaa
     5701 tttggatacc tccttgataa tggaaacttt cgatacgttc atccttaaag ttaactggaa
     5761 cgcttttgtg ccgtaatagt tcgctatgtt cgtaaatttc ttgatagact ctgctagttt
     5821 ctttttgata gtctagtttt tcaaaaatag tcattgctgt gggtaataga aaactacaaa
     5881 ccattgaaaa aaggagaagt gaaaccatgc tttcaactaa agagaatccg ttaattttat
     5941 tcaattctaa aacgcccctt tccgatttga aatattagct tgtagttatt tgtcgaactt
     6001 gtcaggtgaa ttgttgaaaa acgattaatg gatccatctg tactcgagaa acgaaaattt
     6061 cctatttttg gttgtgttaa agttaacgtc tgtgagaatg gaaggatagc aagtgttttt
     6121 gagttagtat atgtgatgag ttggtttctc attggatcaa atgaaataaa cgtatcttgc
     6181 tttgttgcta cagcatttat ttgcgcatag taaatggtgg cttttatttc ttctagtagt
     6241 tgtttctccc taagcgtgga taatgtactt gaaataggaa agatggttaa tgtgattagt
     6301 gtaaagctga tagttagtac aagtaacatt tctaataaag taaatccatt tattttcatt
     6361 ttttctcaga aacatttcct gagctatcta tcttgatact atttccatta ggacaagttt
     6421 tttggttagc ttttagataa cctccactta ctaaatcagc tacagaaggg attgaatttt
     6481 tatctaattg gtaggactga acttgacctt gaaccattga aataaaggcc tcgcatcctt
     6541 tatcgttgat tgacttactt tgtgatacta tgttgggaat agtaaggagt aacaaaacac
     6601 taaccactaa caatacaatt aacatctcca ccaaagtaaa gcctcgctca tctcgccaat
     6661 caattttctt tttaaacatt aaaactcctc cttttaaatt tgatttacca tagaaaacat
     6721 gggatataaa atggataaat aaatggatac aattaaaata ccaataacga taaaaacaat
     6781 tggttggata aatgaaaata atttttcggt cttttgaagt gatttctgat gacataagtt
     6841 ataataaaat aaaaattctt ctgctaaatt accatttttt tcaccgtgga tagcaatgta
     6901 ataaagttct ctttcaaata taggcatttt ttctagtgct tttgttagtg ataatccttg
     6961 ttcaagcgta ggaaggattt gcctggcgat tgcttgaaag aatgcgggcg attcttcttg
     7021 cgcgaagagg tgcataatat gcgttataga taaaccgctt ttcagcagat atccaagttc
     7081 gcgcgaaagg tattgcgaat aatgaattct tgaaaattgg cgaatatatg gaattcgaca
     7141 ataaaaataa gctcggtcgt aagcattttt ttgcttttgt tttcgaataa ggaaactgaa
     7201 gattagaaaa aggctaagta aaaaaattcc taataaaact ggaatttttt caagcaggaa
     7261 ataagtgaat ttagttccga ctgtgccgtt agttgataat tgtgtaaata aaagttcgaa
     7321 tttaggtaag agaaaaattc gaagcaagaa gaacaccaga ataacagtag agaataagac
     7381 tagtggatat tggaaggtct tcattaatgc gtttttttcc tccgcttttc ttttcatatg
     7441 gacgccggtt tcgtgaattg tttgcaaaaa gtaaccgtga ctagaagcat aatgaagttg
     7501 tgaacaaatg aattcaggaa atccgttttt tgaaagagca taggaaaaag aatttccgtt
     7561 tgcaagtgaa gtgataattt gttcatatct tttgcgatat ttgggcgaag taatgcttaa
     7621 atagctaatg gtcgcatcta atgagaatcc cttttcgagt aaactggcaa ctctaattaa
     7681 aaattctccg tcctctttcc aattagtgcg ctgaaaaaaa accataggca actcctttct
     7741 cgaatgttct tttaataggg tatttaggct taatctgctg tttattagat tggaaatagg
     7801 cttttatctc ttgttgcgta agaacttcat agatagctgt tctttttcgg tgcaaatgtg
     7861 tacaaagggg atggcatttt tctccgcaga aggtgcaaac taggtgtgtc agcttctgaa
     7921 aactgattcc tagtaagcat tgcgctaatt cttctgagct aataccgaat tcaagtaatc
     7981 ttaataaaac tccgtaagca tctccggcat gaaccgtgct taaaactaag tgaccggtta
     8041 atgcagcacg aacaactatt ttagcggttt ctgcatcgcg tatttccccg ataattaaaa
     8101 tatcaggatc atggcgtaag acggagcgaa tgatgggtgc ataggtaatg cttgcttttt
     8161 cgttcacttc gatttggaga aagccgggag aatgatgttc aacaggatct tcaattgtaa
     8221 tgatttgcag ttcatcttta ttttctatag aagaaacaag gctatacata gaactggact
     8281 taccactacc tgtgctaccg gaaaaaagaa acaagcctgt ttggttttta cactgttgtt
     8341 gaatttgatt agtggatcta ggaaaaacac tagattttaa aaatgggata gggtacttgt
     8401 aacgaaaaat tcgaatgacc atgctttcat gaaaatcttt gctaggcata gtagaaagcc
     8461 gtatagcaat tttttctgtg tttgtatttt tttcaaagct accagattga ggtcgtcttt
     8521 tttcgcttat atccaaagct gcttggaatt taagaaaaga tattaacttt tcccctacat
     8581 ctattggaag gtaaagaagc ggaatcaatg tcccgtttac ccgaagacgg agtaagtaac
     8641 ggtttgagag tggatgaata tgaacatcac ttgcatggac acgtaatgct tgagttatga
     8701 tgtgttctgt cattttttgc ggcataagaa cctccttaca agtcatattc ctcaaaagta
     8761 aacaaaatcc tttgtgtccc aatctttcac aaaaacgaaa atagtatttt ctaaatgcaa
     8821 aagtagcatt tcaagctaaa ataatattga aagtggtatt ttagaagcaa ataagtgaat
     8881 aaaaaatttt tttcgatttt gatgattttc acaatctatg tgcaatgaat aacaagcgta
     8941 taattaaacg gtaatatcgc aataaagccc ttacattccg aaccaatatc aaaaataaag
     9001 aaaatttaag ctttaaaact aattatttgc cgaacaatac aactcatgat aagctataga
     9061 aaaggcaaat acataataga attagcgggt gaatgtaagc agagagactg cgaaaagcgg
     9121 cgccgacggg gaaagcatgt attatgtgaa actctcaggc aaaaggatgt ttacgggacg
     9181 caactctgga gtcatttttg tgttacgaca gggcttatga accatataag cctttttgtt
     9241 atgtgaaaaa ggaggatata attatgacag agttactaaa aacaccgatt catccacttt
     9301 atgcaaaata tggtgcgaaa accattgatt ttggtggatg ggatttaccg gtacaatttg
     9361 ctggtataaa agcagaacat gaggccgtgc gaactgatgc agggctattt gatgtgtctc
     9421 acatgggaga aattctagta aaaggaccgg atagtacttc ttatttacag tatttgttaa
     9481 ccaatgacat tgaaaaaata aaaatcggaa aagcacaata taatattatg tgctatgaaa
     9541 ctggtggaac agtggacgat ttagtagttt acaagaaatc agaaacggaa tacatacttg
     9601 ttgtcaatgc agcaaatacg gacaaggatt ttgaatggat ggttaaaaat attcgcgggg
     9661 atgtttctgt taccaatgta tcttcggaat atggacaatt agcacttcaa gggccaagcg
     9721 cagaaaaaat tctcgcaaaa ctaacggatg tagatttaag ttcgattagc ttctttggat
     9781 ttgtggagga tgcggatgta gcaggagtga aaacaatcat ttcaagaagt ggctatactg
     9841 gagaagatgg atttgaaatt tatatgccaa gcgctgatgc aggaaaagtt tttgaggcaa
     9901 ttttagctga aggagtagct ccaattggtt taggtgcacg ggatacattg cgcttagagg
     9961 cggtacttgc gctttatggg caagaattga gcaaggacat tacaccactt gaagcagggc
    10021 ttaattttgc tgttaaatta aaaaaagaag cagattttat aggtaaagaa gcgcttatta
    10081 aacaaaaaga agcagggctg aatagaaaac tagttggtat tgaattaatt gaacgaggta
    10141 ttccgcgtca cgattatcca gtatttctaa atgaggaaga aattggcatt gtgacttctg
    10201 gtacccaatc acccacactt ggaacaaata ttggtcttgc tctaattgat acagcttaca
    10261 cagaaatagg tcaagaagta gaagtaggta taagaaacaa aaaaataaaa gcgaaaatag
    10321 taccaacacc attttataaa cgcgcaaagt aaaaaggagg aagtaatatg gcaaaacatc
    10381 gttatttacc aatgacagag caagatgaaa aggaaatgct tgatgtaata ggggttaagt
    10441 caattgatga cttatttcaa gatattccag aaaaaattag atttaaacga gattatgatt
    10501 taaaaccagc aaaatctgaa cctgcacttt tacgcgaatt atcgaaactt gcttctaaaa
    10561 atgctaatac tactgaatat gcgtcttttt taggggctgg agtttatagt cattacattc
    10621 caactgtagt cgatcatgtt atttctcgct cagaatttta tacagcatat acgccttatc
    10681 aacctgaaat ttctcaagga gagttgcagg caatctttga attccaaacg atgattgcgg
    10741 aacttactgg aatggacttg gctaattcct ctatgtatga tggtggaaca gcgcttgcag
    10801 aagcagcgat gctagcaagt ggacatacaa agcgcaaaaa aattctcatt tccggagctg
    10861 ttcacccgga aagtagcaat gttttaaaaa cctatgcaac tggccaacac attgaagtag
    10921 aagttattcc agaactagat ggaaaaacag acattgaggc gctaaaaaaa gctctttcag
    10981 atgatattgc gggttttgtt gtacaatatc caaacttcta tggacaagtg gaacctttgg
    11041 ctgaacttga aaaattagtg catgaaaata attctttatt acttgtatcg agcaatccgt
    11101 tgtctctagg tttgttaaca ccaccaggag aatttggtgc agatattgtt gtgggtgatt
    11161 cgcaagtatt tggtatccca gaatcatttg gtggaccgca ttgtggattc tttgcagtaa
    11221 caaataaatt aatgcgtaaa gttcctggac gtttagttgg ggaaaccgta gacgagaacg
    11281 ggaagcgcgg gtatgtacta acattacaag cacgcgaaca acatattcgc cgtgataaag
    11341 cgacgtctaa tatttgttcc aatcaagcat tgaatgcatt agcttcttct gtcgcaatgg
    11401 caacccttgg aaaaacaggt cttgtagaaa tggcaaaaca aaacttagat aaatctcatt
    11461 atgccaaaca aaaattccgt gaaaaaggct ttgaagttct attttcagat ggctttttca
    11521 atgaatttgt tgtaaaactt tcgaaaccaa tcaaagaagt gaatgaatca cttttagatg
    11581 aagggattat tggtgggtat gaccttggtt tttatgagga aaaatatgaa aaccatatgc
    11641 ttgtagctgt tactgaaatg cggacaaaag aggaaattga tgcctttgtg gcgagcttgg
    11701 agggtgcaaa atgaatttag aagaaacgat gccattagtg tttgaacgtt ctattccagg
    11761 aagaattggc tttagtttac cagaaagcga tgttccagaa acaaaagcca gtgattattt
    11821 tgaacaagcg tatattcgtt ctgtaccagc agatttgcct gaattaagcg agcttgaaat
    11881 catgcgtcat tataccaatt tatccaatca taactttggt gttgattctg gtttttatcc
    11941 gcttggctct tgtacgatga aatataaccc aaaaatcaat gaaaaagttg cacgctttcc
    12001 tggtttcgct aatatccatc caaaccaacc agaaagctct gtccaaggcg cgctagaact
    12061 actgtatgat ttgcaaacaa gcttagttga aattacagga atggatgaag taacgctaca
    12121 accagctgct ggagcacacg gagaatggac gggattaatg ctcattcgtg cattccatga
    12181 aaagaatggg gatacaaaac gcacaaaagt aatcatccca gactctgcac atggaacaaa
    12241 ccctgcatct gcagcagtag cgggcttcga tgttgtgacg gtgaaatcga atgaaaaagg
    12301 acttgtcgat gtagctgatt tgaaaaaagt agtaggcgaa gacacggccg cactaatgct
    12361 cacaaaccca aatacacttg gtctttttga aaaagatatt gttgaaatgg cggaaattgt
    12421 tcatgaagct ggcgggaaat tgtactatga tggtgccaat ttaaatgcta ttatggcgaa
    12481 agttagacca ggagacatgg gctttgatgt tgttcatttg aatttacaca aaacatttac
    12541 tggtcctcac ggtggtggcg gtcctggttc tggcccaatt ggcgtgaaaa aggaattaat
    12601 accattctta ccaacaccag tccttacgaa aaaagaagaa ggatacacgt ttgattataa
    12661 ctatcctgac tctattggac gagtgaaacc ttattatggc aacttcggca tcaatgttcg
    12721 cgcgtatacg tatattcgca caatgggtcc ggatggcttg aaattggtga cagaatatgc
    12781 cgttttaaat gccaactata tgatgcgtaa actgcaagaa gcctatgatt taccatttga
    12841 tcaagtttgt aaacacgaat ttgttttaag tggtaataga cagaagaaac ttggcgtaag
    12901 aactgttgat attgcgaaac gattgctaga tcacaatttc catccgccaa cagtttattt
    12961 tccgctaatt gttggtgaag caatcatgat tgaaccgact gaaacagaat cgaaagaaac
    13021 tctagattct ttcattgata cgatgttaaa aattgcgaaa gaagcggaag aaaatcctga
    13081 aatcgtccaa gaagcgccac atagcaccta tgtgaaacga ctagacgaaa cacgcgctgc
    13141 tagaaaaccg attttacgtt atcaaaaaga agtataaaaa gaagccttgt tgcgaaactt
    13201 cgcagcaagg ctttttctta tttagattta gtttttcctg tccatttacg gtagccgcct
    13261 ttaagctgat aaacttgttt gtatccgcgt ttataaagca taattgctgc acggttacta
    13321 cgttgtgctg tttggcagta taagtaaact ggtaaatctt gacgaatttc tgttgtccgg
    13381 tttttcattt gtgtaactgg gatatttcta gctccaagaa tatgtccagc atcgaattca
    13441 tttggctcgc gaacatcaat taactgtgct ttacgataac cttttttaaa ttcttcttct
    13501 gttaaaactt ttactgcttt gcgacgcatt acaaactggt aaatttcgta tcctagaaga
    13561 ataaccagaa tgataattgc tataatccaa ctaatcaatt gtgtaaaccc ctttcatcct
    13621 gaaaactgct ttttttaaag catccttttc tattataact tattttttgc caccatcaat
    13681 cactttgaaa gaagattttc gttttttctt cgtttttttc ttcggatcat gtaaattttt
    13741 cgattgtttt actgcttttt ggtaattact gtcagttttt ctatttgtga aaaaccgcag
    13801 tagaagggtg aaaataagtg ccccgattaa tacggaaata attaaggtga aaaatgattt
    13861 aaaaccaccc attaaaagcc caataccaac aagcgcaagt aaaataataa ctatgagggg
    13921 atacttcttc aaattaatcc actcctattc taaaagttcc agattctccg gttccgctac
    13981 atctactggt gcaccttctt tttccactcg taaaagctca ttaaaggatg caatggcaac
    14041 ctcaacttga tcatcagacg gttcttttgt tgtaagaagt tgtagccata aacccgggac
    14101 acctaaatat ttaagaactg ggatattacg gcatttatta gttaattgaa gtacttcaaa
    14161 agctacacca agtacgacag gaataagtaa aatccggtcg accacacgaa gccaaagagg
    14221 atcagttggt actaacaaat aaataaacat accaacaata actgtaaata aaataaaact
    14281 actaccacaa cgataatgaa gtcgcgattg tttctgtaca ttttcaaccg ttaaaggtaa
    14341 attttcttcg taacaattta ttaccttatg ctcagaaccg tgatattgaa aaactcgttt
    14401 aataataggg gtctgagaaa ccgcgaaaat ataggttaat agaagaatta atttgaaaag
    14461 actctctaaa aatacttgcg ccgtatcacc tggtacgata ggacggaata attccgctaa
    14521 aaatacaggg atgagcgtca tgacaaattt tgcaaagacg aaagataaaa taccgatgac
    14581 agcaacacca agccacatcg cgactttcga ttctttcttt tcaatttttt cttcttctac
    14641 tggattattt ggatcttcat catatcggtc tgttgcaaaa gcgaggtgtt tggaaccgat
    14701 agcgctagat tcaattaatg caacaattcc tcttaaaaaa gggattttct tcatacgcat
    14761 aacccaaacc ggactatttt tttctaaata aaaatattct aatgaaccat ctatacgtct
    14821 aattgctgtt acggtctgtt ttctgccgcc aaacatgacg ccttcaacta cagcttgacc
    14881 gccatatgat ggcacgtttt gtttgctcaa agttttcacc agcctattca tgtttactaa
    14941 tatgttattt tacgctaaaa atagtttttc gtatagcgca aaacgcctaa aaaaagttat
    15001 tttttctaaa ttgtgataaa atagtttcga acgcgtctaa taatgcgatt tttgcgcgcc
    15061 taaaatttga taaaagtggg ggaataaaaa tgtctaaatt aactaaaatt caagaaacgc
    15121 tgggcaagga aaagatagaa gccgttcttg tcacaagtga gtttaataga aggtatgtat
    15181 caggtttcac tggaacaagt ggtgtggcgc taattttacc tgaaaaagct tattttgtaa
    15241 ctgatttcag atatacggaa caagcagcaa aacaagcaga aggatacgaa attgtacaac
    15301 atactggtcc gatttttgat acagtagaag atttattaat taaaaatgat acaaaaacac
    15361 tacattttga agcggattat gtgaccgtat ctgaatttaa acaaatggag cgcgtattta
    15421 atcgtcaatt aatcccactt actggcttct ttgaagaaat gcgtaaagtg aaaacagcaa
    15481 gtgaactaaa agcaatccgc acagcttgtg atattgctga tgcagctttt gcacatatca
    15541 ttcaatttat caaaccaggc atggctgaaa tcgaagtatc taatgaacta gaattcttta
    15601 tgagacgtgc gggagctact tcctcgtcgt ttgatacaat tgtcgcatct ggtgttcgtt
    15661 ctgcgttacc gcatggtgtt gcttctgata aaaaaatcga agttggcgat ttcgttacaa
    15721 tggattacgg ctgttattat gacggttatt gttcagatat gacaagaact atcgcggtcg
    15781 gtgaacctgc tgaaaaatta aaagaaattt accaaattac gttagatgcg caattaaagg
    15841 taattgatag cttaaaacca ggtatgactg gaattgaagc agatgctatt gcacgtgatt
    15901 atatttcttc ttttggctat ggcgatgcat ttggacattc tttaggacat ggtattggac
    15961 tagaaattca cgaaggacct aatttatcct ttaagagccc tcaaaaacta gaagtcggac
    16021 atgttgtgac ggatgaacca ggaatttatt taccaggaat cggtggcgtt agaattgaag
    16081 atgatctctt aattacagaa acaggtaatg agattttaat tcattcacca aaagaattaa
    16141 ttattttata aaattccttt gtaactttgt gtgttttatg gttaaataag gaagaatgag
    16201 cagttttaat atgctccaaa taaagatact ttgcaaatta caggaggaaa aacatgattt
    16261 cagtaaatga ctttaaaaca gggttaacaa tagaagtaga taatggtatt tggcgtgtgc
    16321 tagattttca acatgtaaaa cccggaaaag gagcagcatt cgttcgttcc aaattacgta
    16381 accttcgtac aggtgcaatc caagaaaaaa cattccgtgg tggcgaaaaa gtagcaaaag
    16441 cgcaaatcga caaccgtaaa atggcctact tgtatgctga cggcacaaat cacgtattca
    16501 tggataatga gtcttatgaa caaattgagc ttccagaaga ccaaattgct catgaactta
    16561 aattcctaaa agaaaatatg gaaattaata ttatcatgta tcaaggcgaa acaatcggta
    16621 ttgatttacc taacacagta gaattagttg ttactgcaac tgatcctgga attaaaggtg
    16681 atacttcttc aggcggttct aaaccagcca ctcttgaaac tggtcttgtt gtccaagtgc
    16741 catttttcgt taatgaagga gacaaactag taattaatac aaccgaagca gcgtatgttt
    16801 ctcgggcgta agcaagaatc gtttactaca gctggagtta attcttcagc tgtttttcta
    16861 tttcttagcg cttccagtac accttttgaa taaaaagtat ggtacaataa ggacaatgcg
    16921 tgattcatgc aattttttat ttttagtatt attaaggagt gtaaatggta tgttatcaat
    16981 agatgaaatt aaacagctaa tcgagctgat tgacgagtca accctagatg aatttgagtt
    17041 agaaacgaaa gatagtaaga ttttgcttaa aaagaataaa acggttgttg ctgcagcagt
    17101 tcaagaagca ccaattgcta tcacacaagc accagctcag gcagcaccag tagcacaagc
    17161 tcaaacagct gctcctcaaa cagaagcaaa tacagcggaa gatgctagtt tagaagtcat
    17221 tacatcgcca atggttggga ctttttacgc atctgcttca ccagaagatg ctaattttgt
    17281 tagcgttgga tctaaagtat ctgcgcaatc tgttgtatgt attgtagaag caatgaaatt
    17341 attcaatgaa attactgctg atattgacgg agaaatcgca gaaattcttg tttcaagtgg
    17401 cgaattagtc gaatttggac aaccactatt caaagttaga aaaaaataag gggtcgaaaa
    17461 acatgattaa aaaagtactg gtagcgaacc gtggagaaat cgctgtccgt atcattcgcg
    17521 ctgcaaaaga acttggagtg gagacagtgg cgatttattc ggaagcagat aaagaagcgc
    17581 tacatattca gctggcggat gaagcttatt gtgtaggtcc cgcggcaaca aaagatagtt
    17641 atttaaatat gtccaacatt attagtcttg cagttttaac gaactgtgat gctattcacc
    17701 caggctatgg tttcttagcc gaaaatgcag atttcgcgga gttatgcgaa gactgtaata
    17761 ttacttttat cggaccaagt gcttccgcta tttcgcaaat gggaacaaaa gatgtagccc
    17821 gcgaaacgat gcgtaaagca ggtgttccaa tcgttcctgg ttcgcaggga atcgttaagg
    17881 atgtagaaga tggcaaaaaa atcgctaaga aaatcggtta tccggttatc attaaagcaa
    17941 cagctggcgg tggcggtaaa ggtatccgtg tagcagaaaa tgaagaaaaa ttaatttctg
    18001 gcattcaaac tacccaacaa gaagccgaag ccgcatttgg tgatcctggc gtttacttag
    18061 aaaagtatat tcaagatttc cgccatgtag aaattcaagt gcttgctgat aaccatggta
    18121 acgttattca tttaggagaa cgtgattgta gtattcaacg tcgcttacaa aagctaattg
    18181 aagaatcacc atcacctgcc attgatgaaa aaactcgcca aaaaatgggg aaagctgctg
    18241 ttaaagctgc caaagccgtg aattattctg gcgcaggaac gattgaattc attttcgatc
    18301 accatgaaaa taatttttac tttatggaaa tgaatacgcg tatccaagta gaacacccgg
    18361 taaccgagct tgttactggt gttgatttag tgaaacaaca atttctagtt gcttctgggg
    18421 aagaactaca aattaaacaa gcagatgtga aattaacagg ttgggcgatg gaatgtcgaa
    18481 ttaacgctga aaatccagag aaaaacttta tgccagctcc aggtgaaatt aaattttatc
    18541 ttcctccagg tggcttaggt gttcgaattg actcagcagc atatccaaac tacaaaatcc
    18601 caccatacta tgattcgatg attgccaaag taatctgtta tgcggaaaca cgggaagaag
    18661 tgattcaaaa aatgaaacgt gcgttgtccg aatttgccat tgatggcatt ccttcaacga
    18721 ttccgttcca tttacgtgta ttagataatg atgtgttttt atcaggcgac ttcaatacca
    18781 aattcttgga gcaaaacgat gtaatgaatc tttctaagga gggctaaata atggcttata
    18841 caaaagattt gcgtaaacaa aatgatgcac cgcttggcaa aattgagatt gcacctgaag
    18901 taatcggcgt aattgctgga cttgccgcaa gtgaaattga aaatgttgct tatatgcaag
    18961 gtggctttgc aacagaaatg cgtgagaaat tcagtggtgc tgtaaactac cgtaagggcg
    19021 taaaagtaga actaaccgaa gaaggaattc taatcgaact ttattgttca gtcttatttg
    19081 gcgcaactat tccacttgtt gctcaaaata ttcaagatgc tgtcagagat accattttta
    19141 atatgactgg tttaaatgta cttgaaatca acgttcatat cgttggtgta caatttgaaa
    19201 aaacagaaac actttccttc gatgattttg agctataaaa ttcaaggaac aaaaggagca
    19261 gctttaacat gaaaagaaga gaagcgcgcg agaaagcact tcaagcacta ttccaaatag
    19321 agctaaacga aatgtcgcta gatcaagcta ttaaaaacat catggaagac gagcaagacg
    19381 actatatgga aaaattagtc gaaggcgtaa tggcgaataa agctgaaatt gatgctatca
    19441 ttgagcctaa tttagataat tggcgcatgg atcgtttgag taaagtcgat ctatccttac
    19501 ttcgactaag tgtctatgaa attaagtact tggatgatgt gccaaataga gttagtttga
    19561 atgaatccat cgaaattgca aaaatttaca gtgatgaaaa atcaagtaaa tttattaatg
    19621 gcgtacttgc taatattgca ccggaagata aataagcttg attgagtgca agggaaatct
    19681 cttgcactcc cttatttcgt gattttttta agaataatta cgtggaaagt atttttaagg
    19741 gggcaatact catgggagaa attattgatg gcaaaaagtt agcaaaagaa attcaagaaa
    19801 aagtaacaag agaagtagct gaattagtaa aagaaggtaa gaaaccaggg cttgctgttg
    19861 tgctcgttgg cgacaatcaa gcatctcgta catatgtaag aaataaacaa aaacggacag
    19921 aagaagcggg gatgaaatcc gttttaattg aacttccaga aaatgtaaca gaagaaaaat
    19981 tactatctgt tgtagaggag cttaacgaag ataaaactat tcatggcata ctcgtgcagt
    20041 taccactacc agaacacatt tcagaagaaa aagtaattga tactattagc tatgacaaag
    20101 atgttgacgg tttccatcca gtgaatgtag gtaatttatt catcggaaaa gattcttttg
    20161 ttccttgtac accagcagga attattgaac ttataaaatc gaccggcact caaatagaag
    20221 gcaaacgcgc tgttgttatt ggtagaagta acatcgtagg gaaaccagta gctcaattac
    20281 tgttaaatga aaacgcgaca gtaaccattg cgcatagccg tacaaaagat ttacctcaag
    20341 tagcgaaaga agcagatatt cttgttgtag cgacaggcct agcgaaattc gtgaaaaaag
    20401 attatatcaa accaggcgcg attgttattg atgttggcat ggatcgcgac gaaaataata
    20461 agctatgcgg tgatgtggac tttgatgatg tggtagaaga agcaggattt atcacgccgg
    20521 taccaggtgg cgttggcccg atgacaatca caatgctact tgcgaacaca ttaaaagcag
    20581 caaaacgcat ttggaaaatg aattgattaa ttggatgtga aatgatggag caagataaat
    20641 atttgacggt agcagcaata accaaatata tcgaaaaaaa gtttgaagta gatccctaca
    20701 tgaagcaagt ttttgtgcgc ggtgaaattt ctaatttaaa acaaccagcg agtggacatc
    20761 tatattttac ggtaaaagat gaatttgcga tgcttcgttc tgtcatgttt cacaaagcag
    20821 ttcaaaaaat tggttttgtc ccagaagatg gtatgaatgt ccttatcaca ggacgaattg
    20881 gcgtatttac aaaagctggt cgctatcagt tctatgcaga acatatggaa ccagatggtg
    20941 tcggagcgct ttatattcaa ttagagcaat taaaatcgca attggaaaag gaagggcttt
    21001 ttgcggaaac gcataaaaaa gtgcttcctt ctttcccgtc caaagtcgct gtcgttacgt
    21061 ccaaaactgg tgcggctgtt cgtgatatac taaccaccat tcatcgaaga atgccttctg
    21121 tggaagtgat tgtttatcca actattgttc aaggggagaa agcggctcaa aaaattgtcg
    21181 aaaacattgg caagattaat cagcgaaatg atattgatgt tatgattatt gggcgtggtg
    21241 gtggttcgct tgaagaacta tgggctttta atgaagaacc tgttgttcga gcagtatatg
    21301 attccgatgt acctgtaatt tcagcggtcg gacatgaaac tgattttgcg ttaagtgatt
    21361 tttctgcaga tgtacgagcc gcaacgccaa ctgcggcggc agaacttgct gttccagatt
    21421 atcgcgattt agaagaacga ttagcagaac gtaaataccg tttgctcgca gtcaccagac
    21481 aagaattaga aagaaaagaa cggtcactag agcaacttaa acaacacttg attttaaatg
    21541 gtccgaaaca tcaattagaa cagcaaatgg aacgtacaga ttatttttcc gaacgattaa
    21601 ataatgcttt ttctaaacaa atatttgtta agcaaacagt ttttgaccga ttaaatgatc
    21661 ggctacatta ttaccatccg aataaagaaa ttgaactaca aaaagaacag atggcactac
    21721 gacttcaagc attagaaaaa gcgatgaaac aacttttgaa agacaaacaa caatctttct
    21781 ttcggcaaat agatgcgcta gaacatctga gtcctctttc tttattgaaa cgaggatttg
    21841 gtgtaacgta taaagagaat atgctggtta aatcagtgca ggagcttgaa gtcggcgata
    21901 atatccaagt gaaaatgcaa ggcggacaga tagaggcact cattaccgcg aaggaggaag
    21961 atataagtgg caactaaaaa gaaaactttt gaagaagcaa ttgcagaatt agaaacaatc
    22021 gtagaagcac tcgaaaatgg tagtgcctca cttgaagatt ctctcgatat gtaccaaaaa
    22081 ggaatcgaac taacaaaatt gtgccaagat aaattacaat cagcagaaaa acgaatggca
    22141 aaagtagtca cagatgcagg agaagaaatt ccttttgaag cggatggtga ataaatttgc
    22201 aagatttaac cctttttcta gaacaatata aaaaagtgat tgatgagtcg ctttttaaag
    22261 aaataagcga gcgaaatatc gaacctagac taaaagagtc catgttatat tctgttcaag
    22321 caggtggaaa acggattcgt cccatgctag tttttgctac acttcaagcc ttaaaagtaa
    22381 atccgctttt aggtgtgaaa acagcaacgg cgttagaaat gattcatacg tatagcctga
    22441 tccatgatga tttaccagca atggataatg atgactatcg tcgcggcaaa tatactaatc
    22501 ataaagtttt tggggatgca actgcgattt tggcaggaga cgctttacta acgcttgctt
    22561 tttctatttt agcggaagac gaaaatttat cttttgaaac acgcatagct ttgattaatc
    22621 aaattagttt tagtagtggt gcagaaggaa tggttggcgg tcaacttgca gatatggagg
    22681 cagaaaacaa acaagtgaca ttagaagaac tatcatccat ccatgcacgg aaaacaggcg
    22741 aattattaat ttttgccgta acttctgctg cgaaaattgc agaagctgac ccagaacaaa
    22801 cgaaaagatt acggattttt gcggaaaata ttgggattgg attccaaatc agtgacgata
    22861 ttttagatgt tattggtgat gaaacaaaaa tgggtaaaaa gacaggggtc gacgcttttc
    22921 tgaacaaaag tacctatccc ggattactca cgcttgatgg tgccaaaagg gcattaaatg
    22981 agcatgttgc gattgcaaag tcagcgcttt cagggcatga ttttgatgat gaaattctct
    23041 tgaaacttgc tgatttaatc gcacttagag aaaattaatc ataattatct agtaatttca
    23101 aatttttttc acatatataa ttcaaattga tttgcttttc ctaaaatacc gtgttatact
    23161 aatgtaagat tatttttgtg ggtgaaagat acgattgtga acaactttcc atctcgtgcc
    23221 gttaagcaag aatagtaaat aattagtgtg cataacacac gaggaggaac atgaacatgg
    23281 aacaaggtac agtaaaatgg tttaacgcag aaaaaggatt tggttttatc gaacgcgaaa
    23341 acggtgacga tgtattcgta catttcagcg ctatccaagg cgacggattc aaatctttag
    23401 acgaaggtca agcagtaact ttcgacgttg aagaaggcca acgcggacct caagcagcta
    23461 acgttcaaaa agcgtaattc tattttttga ataagaaaaa gcaaatcatt tcggtgattt
    23521 gcttttttat ttgcctaaaa ttattttacc ttgtttggtt taatggtgat tgtttgctat
    23581 aataagaaca attaattgag aaaaaagacc ttgcacacat tcatgcaagt ggctctttgg
    23641 aaagtgagtt gtttttattt ggatctttta aaaataaagg atccttcctt tatgaagcaa
    23701 ttggatatac aagaattaga agcacttgcg gcagatattc gcgctttttt aattacttct
    23761 acttctaaat caggtgggca tattggtccg aatcttggtg tggtagaact aacgattgcg
    23821 ttgcattatt cttttaatag tccaaaagat aaatttattt gggatgttgg tcaccagtca
    23881 tatgtgcaca aaatcctaac tggaagggcg agccaatttg gtactttacg tgagcacggg
    23941 ggattagatg gatttccaaa gcggaaagaa tctattcatg atgtatttga aacggggcac
    24001 agctcaactt ctttgtctgc tgcagccggg atggttattg cgagagatat taaaaaggaa
    24061 gaattttatg ttattccgat aatcggtgat ggcgccttaa caggtggcat ggctttagag
    24121 gctttgaatc atataggcga tatgggaaaa gatatgatag ttattttaaa tgataatgat
    24181 atgtcgatag cgccaaacgt gggagcaatc cacaacatac ttggaaaatt aaggacctct
    24241 gatacattta agcaaacaaa agctaaagtc gatggtactt tttttgaaga gcttgggttt
    24301 atgtatttgg gcccaattaa tgggcatgat atagaagagg ttattactaa cttggaatta
    24361 gcaaaacgca caaaagggcc tgtactgctc catatcgtta caaaaaaagg caaagggtat
    24421 caaccggccg aattagactc tcgtggcacc tggcatggta caggacctta taaagtcgaa
    24481 acaggtagct ttattaagcc ggctaagcgt gcagcgtcat ggagttcagt tattagcaat
    24541 gaattaatac gtttggcaga aaaggatgaa cggattgttg cgataactcc ggcaatgcct
    24601 gttggctcta aattagaaaa atttgcgaaa gctttcccag aacgcttttt tgatgttggg
    24661 attgcggaac agcatgcgac aacaatggca gcggggctag caacacaagg gatgaaaccg
    24721 ttccttacta tttattccac ttttttacaa agagcctatg atcagttagt tcatgatgtt
    24781 tgccggcaaa agttgaatgt ggtcattggg attgaccggg ccgggcttgt tggcgctgat
    24841 ggcgaaacac atcaaggtat ctttgatatt tcatttttaa atagtattcc aaacatgact
    24901 attagcatgc cgaaagatga agtggaagct agacaattaa tggatactgc gttttcgtat
    24961 aatgatgggc cctttgcgat tcgctatcca cgcggcgaag ctcctggtgc gcaggtagct
    25021 gagtctaata cgcttatacc aatcggaaag tgggaaacaa tcattcagcc gattgatgct
    25081 gttattttaa cctttggccc taccatccgg ctagcgctaa aagcagctga acaattagag
    25141 ttagaaggat accacgttgg agtaattaat gcgcgctata ttaaaccgtt agacgaagca
    25201 cttttacacc aaatcttaaa gcaaaaaatt cccattttaa cagtagaaga atcactatta
    25261 aaaggtggat ttggtgcgag tgtgttagaa tttatagaag cgagtaatta tagcgatgtt
    25321 gtaatgcatc gaatcggttt accagacgaa tttattagcc atggttctgt atccataatt
    25381 ttggaatcat ttggcatatc aacaactgga atagtattaa aaataaaaga aatgctcgca
    25441 caaagcggga agttaagggc gaagagacta tgacaataaa aaaagaacgc gcagatattc
    25501 tgctagtaga acaaggacta tttgaaacaa gagaaaaggc aaaacgtgca attatggcgg
    25561 gaattgttta tcggaaagaa gaacgtgtag ataaacctgg agaaaaaatc cctattgata
    25621 gcgaacttca agtaaaagga aagcaaatgc cttatgttag tcgcggtgga ttaaagctag
    25681 aaaaagcatt gcaagtattt gatttcgaag tgaaagataa acttatgctg gatatcggag
    25741 catcaactgg tggttttaca gactgcgctt tacaaaatgg ggcaagacac tcttatgcgc
    25801 tcgatgttgg ctataatcag cttgcatgga aactgcgcaa cgatgatcgc gtcactgtga
    25861 tggaaagaac taatttccgt catgtaacgc cagctgattt ttccgaaggt ttagcagatt
    25921 ttgcaacgat tgatgtatcc tttatttcac tcaaactaat tttaccagta cttagaactg
    25981 tgcttgtaac cggtggcgat gtgatgacac ttatcaaacc acaatttgaa gcaggccgag
    26041 agcaagtcgg taaaaaaggg attattcgtg atccagcagt acatgaatcg gtagttgaac
    26101 atattgttca atttgcgctc gataatggtt atgatttgat gggacttgat ttttcaccta
    26161 ttacaggtgg agaaggaaac atcgaattta tcgcgcatct taaatggact ggtggggaaa
    26221 ctggaactaa tcatttggaa ccaaatgcga ttgcgaaact tatcacaaaa gcacatacaa
    26281 aattagataa ataatgtata ccggaaagca gtgatgtttt ccggtttttg cttttatcat
    26341 gctgttttgg ctcattttgc aatgtattac ctatgtataa agtattaaag aaacttttct
    26401 tgcataaatt tgcactaaat ccgtgacttt atgcgttttt tcggataaga tgtaagtaga
    26461 aaattatcgt gaggtgaaga aggaatgaat aaaggtcatc gtcatattat tattcgagaa
    26521 ttgattacat ccaatgagat tgacacgcaa gaagatttag tagaacttct gttagaacgc
    26581 gatgttaaag tcacccaggc aactgtttcc cgtgatatta aagaacttca tcttgtcaaa
    26641 gttccaacac aaacaggtgg ttacaaatac agtctacctg ccgataatag ttttaaccca
    26701 catcaaaaat taaaacgcgc tttgattgat tgctttattg gcattgataa cgtgcaattt
    26761 atgattattt taaaagtaat gccaggaaat ggaaactcgg ttggtgcatt aatcgataac
    26821 ttggactggc cggaaaaagc cggaactatt tgtggagatg acacttgttt aattatttgt
    26881 cgctcggaag aaaatgcgaa aacattaaca gatcgtttta tagatatgct ttaaaatttg
    26941 ttggaggtga aagattttgc ttcaagaaat gacaattaaa aactttgcta tcatcgaatc
    27001 gctttcttta acttttcaag aagggatgac ggtacttacg ggggagaccg gcgctggtaa
    27061 atcaattatt attgatgcgc ttggtcttct tgttggcgga cgcggatcag ctgattttat
    27121 ccgtcatgga gaagaacgtt tagaacttca agggcttttt gcgctagcag aggataacct
    27181 tgcttgccga aatgcgttaa ttgaaaatgg gatagatgct tcggatgata tggttgtact
    27241 agaacgcagc ctgtttcgct cggggaaaaa tagttgccga attaatggca aacttgtaac
    27301 taccgttctc ttgcgccaaa ttggctcgaa attaatagat atccatagtc agcatgaaca
    27361 tcaggaattg atgaatgagg agtttcattt gtcattactt gatcgtttcg cttctgacaa
    27421 aatcaagcca gcactaacca agtaccaaac taatttcaaa gaatatcaaa caatcgagaa
    27481 agagtggcaa aattggacga aaaatgagcg ggaattagcg caacgtctgg atatgctccg
    27541 ttttcaacaa caggaaattg aaaatgccaa tttgcaagct ggtgaagaag atcgcttgtt
    27601 agaacaaaaa aatatcttag ccaattttga aaaacttaac gaaaatttac aaggagctta
    27661 tgccgcgatt caaggtgagc ctggtgggct ggaatttgtt ggagaagcaa tgcgtcaaat
    27721 ggaggcagcg gcgagtattc atacggatta taaagcggtt agtgaggcca tttcttctag
    27781 ttactatatg ttagaagata gcatgagcca aattaggcaa tcactagatc agctcgaatt
    27841 ccaaccagaa gaactgaatc aaattgaatc acgtttgaat gatttaaacc aattaaaacg
    27901 caaatatggt aaaacaattg aagatatcat tcaatacgaa caagaaataa gcagcgaaat
    27961 ggaaaaactg acagatagtg aatcacatgt cgggcattta gagaccaaat tagcaacact
    28021 taaagcagaa ctaacaaaac aagcaaatac actaacggaa atccgtaaaa aagcggctgt
    28081 tacattagaa aaacaaatca aacaagaatt aaatcactta tatatggaga aagccatttt
    28141 tagtgtacgc ttcgaagcaa acaaaatgga actaacagat tcagggcaag atagcgtcgt
    28201 tttctatatg tcaacaaacc cgggtgaacc tttaaaacca ttagcaaaaa tcgcttctgg
    28261 tggagagtta tctagaatga tgttagcatt aaaaaccatt ttttctaggc accaaggtat
    28321 cacctcgatt attttcgatg aagtagatac tggtgtaagt ggtcgcgttg gtcaagcgat
    28381 tgcagaaaaa atttatgctg tttcagttgg ctcgcaagta ctatgcatta gtcacttacc
    28441 tcaagttgca gcaatggcga accatcacta ctacattacg aaaaaagtcc aaaacaaacg
    28501 gacaacaact tccgttacag tgcttaaagg ggaagagaaa gtagaagaaa tcagtcgaat
    28561 gattgctgga atagaagtca ccgaattaac caaacaacat gcaaaagaaa tgattgaaca
    28621 agcggaaaaa gtaaaacaaa cgtattaaaa aaacgaaatt gcttgcatat cgaatagttt
    28681 ttgcttaaaa tgaataaggt agaaaattat tacctggtca taaaaacaac tactaattcg
    28741 gaatgcggct tttttgtgcg ataaaggagt tatttttatg acaaaaagta gatttttttc
    28801 agatgtaata gaaacaagtt catttgtttt cgccgtagca ggagcagatg atgaagttgt
    28861 gctcgaaacg attcgtcttg cattaaacca aaatttaggt aaatttcttt tatttggcaa
    28921 gaaggaagac aaaacgttaa ccgcgaatga aaacgttaca tggattcaaa cagataccgc
    28981 tgaagccgca gcacaaggcg ccattttagc ggtaaaaaat aaagaagcag atattttagt
    29041 aaaaggattc attccaaccg ccacattgat gcatcacgta ttaaaaaaag aaaatggcct
    29101 tcgtacagac caattattga gtcaaattgc catttttgat attccaacgt atcacaaacc
    29161 attattgata actgattgtg ccatgaacgt agcgccaaaa acaaaagaga aaattgctat
    29221 cacagaaaat gccatagccg tagcgcatca aatcggcatc gctaatccta aaattgcgtt
    29281 acttagtgcg gtggaagaag tgacagcaaa aatgccatcc acagtagaag cacaggaagt
    29341 agtgcagcat tttgataaca caatagccgt ctcgggtccg ctagctctcg atgtagctat
    29401 ttccaaagaa gcggctctcc ataaaggaat tacggatagt tcagcgggag aagcagacat
    29461 attaattgct cctaatattg aaacaggaaa tgcactttat aaatcattag tctactttgc
    29521 tggagctaaa gtaggtagtg cagtggtcgg ggcaaaagta cctattgtca tttcctcaag
    29581 aaatgattca ccggaaaaca aattagcttc attcatacta actgtaagac tagttgagaa
    29641 atgatgaaat aatgtgaata gacggacttt aacaatctga atgcaaaggc ttttatttga
    29701 ttacagccta cgtgttacaa tagtccatgg gaaaatgata acctaccgca tttttcacaa
    29761 ttaaatttgg aggaaagcaa atgtcttttg atgttttaac cataaatcct ggttccacgt
    29821 ctaccaaact cgctgtttac caaggcgata aagtactttt tgaagaaact gtcagacata
    29881 caatgcaaga actagccgac tttaataacg tacaggaaca atttgatttt aggtggcaag
    29941 ttctacgtcg agtgatggat gcatatggtt atgatgtaaa gaaattacaa gcggtagttg
    30001 gaagaggggg cttacttcga ccagttgccg gcggtacata tatggttaca gaaaaaatga
    30061 tagatgactt aaaagaaaat aaatacggag agcatgcctc aaatttaggg gcactgcttg
    30121 caaaaaaatt agcagatgaa ctgacaatac ctagttttat tgtggatccg gttgtcgtgg
    30181 atgaaatgca ggaaattgca aggatatctg gcaatgcctt cattgctaga aaaagtattt
    30241 ttcatgcatt aaatcataaa gcagcaggtc ggaaaatagc caaagagcta ggaaaagatt
    30301 atgaaaaaat gaattttgtt atcgcgcatc ttggcggtgg aatttcagtt gccgctcatc
    30361 gacaaggaaa agcggtggat gtgaataatg ccttagatgg ggacggccct tttagtccgg
    30421 aacgttctgg ttctttaccg atgaatgatt ttctagaagc atgttttagc ggtaaatgga
    30481 caaaacgcga attgcatgaa ctgattgttg gtcgtggtgg gatgatttca tatttaggaa
    30541 ctaacagcat gctcgaggtg gaagctaaag tacaagcagg tgacgtgaaa gctatcgaag
    30601 cttttgatgc aatggcttat caagttagca aagaaattgg cgcatgttcc gttgtattgc
    30661 aaggtaaagt tgacgccata attttaactg gtggccttgc tagaagtgaa ctttttacaa
    30721 acaaaattat tgagcaaaca aactggataa ccagtgtgat tatagaaccc ggagaagacg
    30781 aattagaagc attaaatagc ggtgtgcaac gtgtgctcgc tggtcttgag aaagaaaaag
    30841 agtactaaaa ggaggagata atgtggcaac agaatatgat gtcgttattc ttggcggagg
    30901 aactggcggt tacgtcgcag caattcaagc agctaagaat ggccagaaag tagccgtcgt
    30961 tgaaaaaggg aaagttggtg gaacgtgtct tcatcgtgga tgtattccaa cgaaagcgtt
    31021 attacgttca gcggaagttc tgcaaacagt aaaaaaagca agtgaatttg gtatttctgt
    31081 agaaggaact gccggaatca attttttaca agcacaagaa agaaaacaag caatcgtaga
    31141 tcaattagaa aaaggtattc accaattatt taaacaaggg aaaattgact tgtttgttgg
    31201 aacgggaact attttaggac catctatttt ttcaccaaca gctggaacag tttcagtcga
    31261 atttgaagat ggctctgaaa atgaaatgct cattcctaaa aatttaatta tcgcgacagg
    31321 ctccaaaccg cgcacattaa atggtttaag cattgatgaa gaaaatgttt tatcatctga
    31381 cggtgcgcta aacctagaaa ctttaccaaa atcaattatt atcgttggcg gtggagttat
    31441 cgggatggaa tgggcttcga tgatgcatga ttttggcgta gaagttaccg tgctagaata
    31501 tgcagatcga attttgccaa cagaagataa agaagtagct aaagaattag caagacttta
    31561 taaaaagaaa aaattaatca tgcatacatc tgctgaagtt caagcagcta gttataaaaa
    31621 aacggatact ggtgtggaaa ttaaagcaat tattaaaggc gaagagcaaa ctttcgcagc
    31681 agacaaaatt ctcgtttctg tcggtcgttc agctaataca gaaaatatcg gtttgcaaaa
    31741 cacggatatc gcgaccgaaa acggttttat ccaagtaaat gatttttatc aaacaaaaga
    31801 aagccatatc tacgcgattg gtgattgcat tccaacaatc caacttgcgc acgttgcgat
    31861 ggaagaagga acgattgcag ccaaccatat tgccggaaaa gtggctgaaa aacttgacta
    31921 cgacttagtt cctcgctgta tttatacttc tacagaaatc gcaagtgtcg gtattacaga
    31981 agaacaagca aaagaacgtg gttatgaagt gaaaaaaggc aaatttttct tccgtggtat
    32041 cgggaaagca ctcgtttacg gagagtcaga tggcttcatt aaaattattg cagataaaaa
    32101 aacagacgat atcctaggcg ttagcatgat tggaccgcac gtaacggaca tgattagcga
    32161 agccgcttta gcacaagttt taaatgcaac gccgtgggaa gtgggtaaca ccattcaccc
    32221 gcacccaact ttatcagaaa gttttagaga agctgccctt gctgtggatg gcaatgcaat
    32281 tcacggttaa tacagcttta aaggaggaac aaaaatgact ttaaaagaag caggtttaac
    32341 agaagataaa ttaattaaaa tgtatgaaac gatgctaatg gcaagaagac tggatgaacg
    32401 tatgtggttg ctgaaccgtt ctgggaaaat tccttttacc atttctggac aaggacaaga
    32461 aacggcacaa attggcgctg cgtttgcctt tgatttagat aaagattatg cattaccata
    32521 ttaccgtgat ttagcagtgg tgttagcatt cgggatgaca gcgaaagata ttatgttatc
    32581 cgcgttcgct aaagcggaag atccaaactc tggcggacgt caaatgccag ctcattttgg
    32641 ccaaaaatca aaccgaatcg ttacacaaag ttcacccgta acaacccagt tcccgcacgc
    32701 agcaggaatt ggtcttgcag caaaaatggc tggtgacgaa attgcgattt atgcatcaac
    32761 tggggaagga tcttctaacc aaggcgattt ccacgaagga atcaactttg catctgtaca
    32821 taagttgcca gttgttttcg tgattcataa taaccaatat gctatttccg ttccagcatc
    32881 gaaacaatat gccgcagaaa aactatctga ccgagcaatt ggttacggca tccctggtga
    32941 acgtgtggat ggaacgaata tgggagaagt atatgcggca tttaaacgtg cagcagattg
    33001 tgcaagaaac ggcgagggac ctactttaat tgagacagtc tcttatcgct tcacaccaca
    33061 ctcctccgat gatgacgata gtagttatcg ttccagagaa gaagtagatg aagcaaaagg
    33121 aaaagatcca ctgaaaattt tccaagcaga attactcgaa gaaggttact taacagaaga
    33181 aaaaatcgct gaaatcgaaa aaagtattgc gaaagaagtt aacgaagcaa ctgattacgc
    33241 ggaaagtgca gcatacgctg aaccagaatc atctttacta tatgtatatg atgaagaagc
    33301 gaatagctga ttaggaggga atttgaatgc cagtcatttc atatattgat gcaataacca
    33361 tggcgcttaa agaagaaatg gagcgcgatg ataaagtatt tattttagga gaagatgttg
    33421 ggaaaaaagg tggcgtattt aaagcgactg ctggcctata tgacgaattt ggtgaagacc
    33481 gagtactcga tacaccactt gctgaatcgg ctattgccgg agtaggaatt ggagcggcga
    33541 tgtatggcta tcgtccagtt gcagaaatgc aatttgcgga ctttattatg cctgctgtca
    33601 accaaattat ttcagaagct tccagaattc gctaccgttc taataacgat tggtcttgtc
    33661 cgatagttat tcgcgcacct tttggcggtg gggtacacgg ggcactttat cattctcaat
    33721 cagttgaaaa agtattcttt ggacaaccag gtttgaaaat tgttgttcca tcctcaccat
    33781 atgatgcgaa ggggctgtta aaagcagcga ttcgtgacaa cgatccagta cttttctttg
    33841 agcataaacg tgcctatcgc ttactgaaag gtgaagtacc agaaacagat tatatcgtac
    33901 caatcggcga agcaaatgtc gttcgtgagg gtgatgatat tacagtaatt acttacggac
    33961 ttgcggttca atttgcccaa caagcagcag aacgtttagc agctgagggt gtggaagccc
    34021 acattcttga tttacggaca atctatccac tagaccaaga agcaattatt gaagcaacga
    34081 aaaaaacagg taaagtactt cttgtaacag aagataataa gcaaggaagt attattagtg
    34141 aagtggcagc aattatttcg gaacattgtc tattcgattt agacgctccg attgcaagac
    34201 tcgcaggacc agatacgcca gcaatgcctt ttgctcctac gatggaaaaa cactttatga
    34261 tcaatccaga taaagtggca gatgcaatga aagaattagc ggaattttag acccgtttta
    34321 aaataaagga gtgaagacct gtggcagttg aaaaaatcac catgcccaaa ttaggggaaa
    34381 gtgttacaga aggtacgatt agttcatggt tagttaaacc aggcgatacc gtcgaaaaat
    34441 atgatgctat cgcggaagtt ttaacagata aagtaacagc tgaaattcca tcatccttta
    34501 gtggcactat caaagaaatt ttagcagagg aagatgaaac tctagaagta ggcgaagtta
    34561 tttgtacaat tgaaacagca gatgcaggaa gttcggaacc tgtagctgaa gtagaacaaa
    34621 cagaaacaaa agcgccagaa aaacaagaaa caaaacaagt gaaactagca gatgcaccag
    34681 ctagtggaag attttctcca gctgtactgc gtattgcagg tgaaaacaat attgatttat
    34741 caactgtaga aggcactggt aaaggtggcc gaattacaag aaaagattta cttcaagtca
    34801 ttgaaaatgg tccagtagcg aaacgcgagg aaatgaagtc tgctccacaa gaaaaagcag
    34861 caatgccaac tcctcctgtt cgttctgcag ctggtgataa agaaatacca atcaatggcg
    34921 taagaaaagc cattgctaaa catatgagcg tgagtaaaca agaaattccg catgcttgga
    34981 tgatggtgga agttgatgct actggtcttg ttcgctatcg taatgcagtt aaagacagct
    35041 ttaaaaaaga agaaggttat tcattaactt atttcgcctt tttcatcaaa gccgttgcac
    35101 aagcattgaa agaattcccg caacttaaca gcacatgggc aggcgataaa attatcgagc
    35161 acgcgaatat caatatttcg attgcgattg cagctggtga tttattgtac gttccagtta
    35221 ttaaaaatgc ggacgaaaaa tctattaaag gcattgctcg cgaaattagc gaacttgctg
    35281 gaaaagcgcg taatggtaaa ctaagccaag ctgatatgga aggtgggact ttcactgtaa
    35341 atagtactgg ttcatttggc tctgttcaat caatggggat tattaaccac cctcaggccg
    35401 ctattcttca agtggaatcg attgttaaac gtcctgtcat tattgacgat atgattgccg
    35461 tgcgagatat ggtgaaccta tgtctatcca tcgatcatcg tattttagat ggcttactag
    35521 caggtaaatt cttacaagca attaaagcca atgtcgaaaa gatttccaaa gaaaatacag
    35581 cattgtatta aaaatgtttt aatctaggtt tagcgggtat tgtttagtac atctagatcc
    35641 atacccctaa actccctaga tgtcttgggt agtactttcg ggtgctgctc ttttttttga
    35701 gaaaaaataa aaaaagcctg aaccaaattg gctcagacgt cggatattta taaaaacatt
    35761 aataccccgg ttaaaacact ggataataca atcgcgatta gcattaaaat aacgacaacg
    35821 cgaactactt ttttattagt catgcggaag aaaactcctc tcataaagca tttcagatat
//
LOCUS       DASDYO010000008        34590 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.008, whole genome shotgun sequence.
ACCESSION   DASDYO010000008 DASDYO010000000
VERSION     DASDYO010000008.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 34590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34590
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.008"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..842)
                     /locus_tag="U0290_000402"
     CDS             complement(<1..842)
                     /locus_tag="U0290_000402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2300470.1"
                     /translation="MSNGSIINRIEGILNDLPKSEKKIGQAVLANPEFTTTASIHKLA
                     QQADASGAAVIRFCKSIGLQSFPELKRQLSLDLAQPQKKGYYDIEPNEDFHTITEKLV
                     SNMIQTMNDTASQLDEAKVLEACELLGEADTIYTYGVGASWLVAEDISQKWLRAGKHV
                     LATQDAHVLAMAFATGKKKAVFIAISNSGETSEVLQLVDQAKLNNVIVISLTRFGSNK
                     LKEKADLSLETSRAPEAEIRSTATSSRQAQLLVIDILFYYYASHHYDEMIQQIKHSRE
                     ATNR"
     gene            complement(930..3341)
                     /locus_tag="U0290_000403"
     CDS             complement(930..3341)
                     /locus_tag="U0290_000403"
                     /EC_number="6.1.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465185.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine--tRNA ligase"
                     /protein_id="HEM2300471.1"
                     /translation="MTFNHKKMEPKWQQYWSEHNTFKTTEDKNKDNFYALDMFPYPSG
                     AGLHVGHPEGYTATDILSRMKRMQGKNVLHPIGWDAFGLPAEQYAIDTGNDPEEFTAL
                     NIANFTRQIKSLGFSYDWDREINTTDPEYYKWTQWIFEKLYEKGLAYEAEIAVNWCPA
                     LGTVLANEEVIDGKSERGGFPVFRKPMRQWMLKITAYADRLLDDLDLVDWPENIKDMQ
                     RNWIGRSEGAEVTFKIKDSDETFNVFTTRPDTLFGATYTVFAPEHELIEKITTPEQKE
                     AVEAYKKQVELKSELERTDLAKDKTGVFTGAYAINPINGEEVPIWIADYVLIQYGTGA
                     IMAVPAHDERDFEFAQQFGLNIRPVLEGGDVTKEAFTGDGPHINSDFLNGLAKAEAIT
                     AAIDWLEKEGIGSRKITYRLRDWLFSRQRYWGEPIPVIHWEDGETTLVPEDELPLLLP
                     KATEIKPSGTGESPLANLHDWVNVTDKNGRKGRRETNTMPQWAGSSWYFLRYIDPNNS
                     EAIADKEKLAEWLPVDVYIGGAEHAVLHLLYARFWHKFLYDIGVVPTKEPFQKLFNQG
                     MILGENNEKMSKSRGNVVNPDEVVEKYGADTLRLYEMFMGPLEASIAWNENGLEGARK
                     FLDRIWRLLVTEEGTLAEKVTTDANANLEKAYHHMVKTVTNHYENLRFNTGISQLMIF
                     INEAYKQDTIPKQYVEGFVQLLSPIAPHLAEELWEILGHTETISYVAWPTYDETKLVE
                     DEVEIVLQVNGKVKSKITVAKSLEKEELEKIAQEDNKMKENLEGKTIRKVIVVPGKLV
                     NIVAN"
     misc_binding    complement(3415..3616)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            3745..4710
                     /locus_tag="U0290_000404"
     CDS             3745..4710
                     /locus_tag="U0290_000404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465186.1"
                     /note="This family includes YhcC from E. coli K-12, an
                     uncharacterized radical SAM protein; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01212 family radical SAM protein"
                     /protein_id="HEM2300472.1"
                     /translation="MKQTNPFVYSNDNKRYHTWNYCLREEFGQKTYKVALDGGFDCPN
                     RDGTVAHGGCTFCSAAGSGDFAGNRALDLKVQFQQVRDKMQTKWKDGKCIAYFQAFTN
                     THAPVAELREKFETVLNEPGVVGLSIATRPDCLPDDVVEYLAELNERTYLWLELGLQS
                     AHDETGRLINRAHDYDCYLEGVHKLQKHNIRICTHIINGLPKETPEMMMETTRKVVES
                     GVDGIKIHLLHLLKGTPMVEDYKKGDLEFLTRDGYVNLVADQLEILPPEMVIHRITGD
                     GGVDDLIGPVWSLNKFEVLNAIDAELVRRDSWQGKHYQPVEVISE"
     gene            4707..5285
                     /locus_tag="U0290_000405"
     CDS             4707..5285
                     /locus_tag="U0290_000405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2300473.1"
                     /translation="MNLRGILPFAHDTLRKVVRPGDYVIDATCGNGHDTLLLAELVGI
                     NGHVLGFDIQQMAVDATKARLENAGVSSQVELVCASHARIPAYTSRPVRAAIFNLGYL
                     PGGDKEITTTADSTLESIGHLMQLLEVGGVIILVIYHGHPAGKIEKDAVVTFCEAIPQ
                     QDFHVLSYQFINQKNDAPFVIIIEKRKPRQAN"
     gene            complement(5307..7172)
                     /gene="asnB"
                     /locus_tag="U0290_000406"
     CDS             complement(5307..7172)
                     /gene="asnB"
                     /locus_tag="U0290_000406"
                     /EC_number="6.3.5.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="asparagine synthase (glutamine-hydrolyzing)"
                     /protein_id="HEM2300474.1"
                     /translation="MCGFVGCVHDRITEITGADKETFRQMNSMITHRGPDDEGYFTDD
                     HVQFGFRRLSIIDVENGHQPLTYENERYWIIFNGEVYNYVELREQLVAEGMTFETESD
                     TEVIIATYAKYKEKTAERLRGMFGFVIWDKQEELVYGARDPFGIKPFFYAEEDGKLFM
                     GSEKKSILHALKEKELDEVSLQNYMTYQFVPEPDSLTKNVKRLEPGHQFTKKIGQPME
                     ITTYWKASFAPVTKSEDAWIKEVRDVMYDSVKMHMRSDVPVGSFLSGGIDSSIIAAIA
                     KEYHPAIKTFSVGFERDGFSEIDVAKETADKLGVENISYVISPEEYMKELPKIVWHMD
                     DPLADPAAIPLYFLSREARKQVTVALSGEGADELFGGYNIYNEPNSLAMFNKMPSVFK
                     SMLNSVARIMPEGMRGKSFLERGTTPMEERYIGNAKMFTEKEKQILLPKYQAGHDYTN
                     ITDPFYAETTNYHPVERMQYIDIHTWLRGDILLKADRMTMANSLEVRVPFLDKEVYNV
                     ARNIPDTMKTTNGTTKYILRKAAATFVPEHVLNRRKLGFPVPIRHWLKDEMNAWVKNI
                     IKESPTDHLINKQYVLGLLDDHCAGKFDYSRKIWTVVIFMIWYDVYVADKYDFGK"
     gene            complement(7309..8508)
                     /locus_tag="U0290_000407"
     CDS             complement(7309..8508)
                     /locus_tag="U0290_000407"
                     /EC_number="2.5.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine adenosyltransferase"
                     /protein_id="HEM2300475.1"
                     /translation="MAKNRHLFTSESVSDGHPDKIADQISDAILDAIISKDPDARVAC
                     ETTVTTGLVLVAGEITTSVYVDIPKIVRDTIKEIGYTRAKYGFDAETCAVLTAIDEQS
                     PDIAQGVDEALESRSGKEIDAAIEAIGAGDQGLMFGFATDETEELMPLPIFLAHGLAR
                     KLTELRKTNKLDYLRPDAKTQVTVEYDEFNQPVRIDTIVVSTQHHPDITQEQIAKDLH
                     TYLFPEVIDASFLDEDTKYFINPTGRFVIGGPLGDAGLTGRKIIVDTYGGYARHGGGA
                     FSGKDPTKVDRSGAYAARYVAKNIVAAGLAKKVEVQVAYAIGVARPVSISIDTYGTSD
                     YSEQELIDGVNELFDLRPAGIIHMLDLRRPIYRQTAAFGHFGRSDLDLPWERTDKAEA
                     LKKLIVK"
     regulatory      complement(8615..8723)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            8930..9232
                     /locus_tag="U0290_000408"
     CDS             8930..9232
                     /locus_tag="U0290_000408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300476.1"
                     /translation="MSLIPLSLIIFLGFLAVLCLFDFVFRLYWFKYFLATMGLIASGV
                     VFFISFYGGGMSQTEIAIAIFIGSFGEYVVSLIISLVRFISRKSKKPKQKKKAKTA"
     gene            complement(9265..14403)
                     /gene="lapB"
                     /locus_tag="U0290_000409"
     CDS             complement(9265..14403)
                     /gene="lapB"
                     /locus_tag="U0290_000409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="surface-anchored adhesin LapB"
                     /protein_id="HEM2300477.1"
                     /translation="MKSKFFTGMMIFLLALICLTGMKAEAKSVGDISPDDISPEISDN
                     RFQSAEGKVLPNFEVDMSISDQSNGKLSIDEDFELTSDGDIILIGTVQGQYIQGTPIL
                     NENGQLNKIPNRDQGIIMRVDRTTKKVEWARVVNYEDGNYNSQYAADKWFSSYKSITT
                     NSSKSAFYVGGEVVNYYGDSGGGSTLIVKSIDANGNFQIAHKSYVSYGVPSRSDLTYA
                     YFMDIQMEGNTLIMSASARYAAQGKQFIRYTLEPASLSITKNEFNPLDNTFWAKYQRT
                     DVLKIDNKGLMAYNADVNGANQLKMSIRESENNYKEITLFDSVPEILANSSPYIFMED
                     RGDGNVFVVMSTPTTWYIALVNIASEQVVETKKMAMNSSTTLNSVIYSEGKGLLLGGS
                     THAEESIFGSEPLNKNNGYYLALGNDLNVTDSQILRTNQHNSLTTIINGVGNKVDGFF
                     SYDGLNNDGYIQNVESPNTYDVNPNGAMIFAEFNLQSAPVLDTGNPILAFYQGERRAD
                     FDELEGVKAYSGIDSSDITKSITKNTFDLYTVGVQQQLYQIEYLPGSGNKTTGTRNIQ
                     LLHPLETPKLEKSYADSHGAFKVGEVVPANAIHAFNGLDSANNVTYVVTAVDDEKITV
                     DASIKRTEGTKTAVISKEITLMTSTADETAVIDVTSVALAAGKYTSLTEVRSEGHFHI
                     YAETMDNVSIDPKYVKLTEDPENPVDWNVPGVYYVTASLDPASGYTAKDVKVSVAVVD
                     VGSPKVISVNMKPYNPTTALVVAEDDINGAGVYKINWAIKDANGLIIQQGVEESGATI
                     RVQTPVPIDLSTLNDGNYTLSVSAADRIGHTSEASEKAFTVDRQAPVVTADDKITYEI
                     NTKKTEEQFLNDVNVKTEAGAVIKTNFDTMVRMDSPGDYTVLVEATDAAGNQSDPIYV
                     IVTVEDTVAPIISADEAISYNQGNTRTEAQFLADIHATTDEPATITSDFADQVKFDTP
                     GVYAVTLKANDISGNQAIPRTVNVTVKDVIAPVITADEAIIYEKGITKSATDFLTDVH
                     AATNDGSAITSNFATVVDLNTPGDYDVTLNSTDAGGNKSDPITVTVTVRDTTPPVITA
                     DTTITYEKGTTKTAAAFLTDVNATTNDGSAVTSNFNPNSLKQVGTYQVTLSAIDENGN
                     YALPVKVTVIVQDTQKPVISSSATSITYERGEKKQETGFFLDLAIKTDDGTPVTSDFD
                     TAVNLDTAGSYTVTLNAEDESGNKADPVTITVTVADTEKPIITADTTITYAKGTTKTA
                     AQFLTDIHATTNDGSTITSNFDPTVLTQEGTYKVVLNAKDDSNNEADPVTVTITVVDT
                     KGPIINALNTITYERTINKNEADFLADIEATTDDGSTITTDFNSKDLDTVGTYTVTLN
                     AEDASGNKATPVKVTMKVEDNIPPIITADQSITYERGITKTEQAFYTDINAATSDNSA
                     ISSDFSKIDLTKTGNYEVLLQATDQSGNKALPLKINVLVQDTIAPVIKTTSREITNER
                     GVPMTEQQLLARIGANTDDGSKITTDYNPAIVNTSGDYLVHLYAVDAAGNQATPVEIT
                     IHVKDTTAPIITADKKISYPVGTDKTVTEFLQDIHATTDDGSKITTDFDPNMLKTKGT
                     YTIHLNAVDADGNKAKTIDVSLTVEEKVTPPTPPTPDDGGNNTNNGSNGTNDRNANIT
                     VNPTKQNTTATNESIPALGDTTSTIPVIVGMFLLATSLVLIRRK"
     gene            complement(14498..15409)
                     /locus_tag="U0290_000410"
     CDS             complement(14498..15409)
                     /locus_tag="U0290_000410"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003741278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEM2300478.1"
                     /translation="MKRKVGIIGTGHVGSDVAFSLVTQGICDEIVLIDKIETKAESEA
                     LELRDMASMTNSYTTITSNDWSALGDADVIVMAVGPETLLREDRMEELVETSRSVAEI
                     VPKIIASGFKGIFVNITNPCDVITMLIQKLSGFDYSRVFGTGTSLDTARMRRVVGEAL
                     HINPKSVEGYVLGEHGESQFVAWSTVKIGGVSITDYKTTTPLDLPALKDAVRGGGWNI
                     LMGKGWTSFGIATAAAGIVDAILTDAKQVFPLAVFSEKTNTYIGQPAIIGANGVIDIL
                     EPKLTTDEVANFNASAEVIKTAFQLIE"
     gene            complement(15426..15668)
                     /locus_tag="U0290_000411"
     CDS             complement(15426..15668)
                     /locus_tag="U0290_000411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2584 domain-containing protein"
                     /protein_id="HEM2300479.1"
                     /translation="MGMPLEVNTMIVTKGKEKRISDNFFELEKLGYRIYPIDVPIAVR
                     KTKEGETLGEAIPRKLVWENNKTIIKYELIALNSSN"
     gene            complement(15719..16192)
                     /gene="ytkD"
                     /locus_tag="U0290_000412"
     CDS             complement(15719..16192)
                     /gene="ytkD"
                     /locus_tag="U0290_000412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphatase YtkD"
                     /protein_id="HEM2300480.1"
                     /translation="MFIYNDTLGNKVTIYFEAQENNPDDVLIIPKTEDGWLFTEHKIR
                     GLEFPGGKGEPGETNLDAAKRELMEETGAISDELHFVADYLVESEERTFTKRVYAADV
                     ISIESLDDYLETKGPVIIQGELSRFILQPAFSFFMRDAGMVQIVQQAERILNDKN"
     gene            16266..16532
                     /gene="yidD"
                     /locus_tag="U0290_000413"
     CDS             16266..16532
                     /gene="yidD"
                     /locus_tag="U0290_000413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertion efficiency factor
                     YidD"
                     /protein_id="HEM2300481.1"
                     /translation="MKKILIGGIRLYQKYISRFTPATCRFYPTCSAYGIEAIQTHGAL
                     KGSYLAIRRISKCHPFHKGGLDFVPPKKEKNADSEHSCKAHHHH"
     gene            16682..17635
                     /locus_tag="U0290_000414"
     CDS             16682..17635
                     /locus_tag="U0290_000414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEM2300482.1"
                     /translation="MRKKYLIALTVLFSALLILTGCSDESDKKATKSDQLTVYTTVYP
                     LQYLTEQIGGEYVDVHSIYPPGSDAHSFEPTQKDMMKIADSDLFFYIGLGMEGFVDKA
                     EKTLANEHVSFVPTAEKLDLPKDPDAAEEHDHESEEEHEHGDINPHVWLNPVYMEQMA
                     TVVKDKLIKEMPDQKETFEKNYQAVEKKLKKLDQDFRTVTKEAKQKDFVTAHAAYSYW
                     ETEYGLHQIPIAGVSTSDEPSQKKLKSIVEKIEAEKIPYIMLEQNTNSKIADVIQQET
                     NTKTLTLHNLETLTQKDLDQKRDYLSIMNDNLKALKEGLNY"
     gene            complement(17653..19062)
                     /locus_tag="U0290_000415"
     CDS             complement(17653..19062)
                     /locus_tag="U0290_000415"
                     /EC_number="6.2.1.26"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate--CoA ligase"
                     /protein_id="HEM2300483.1"
                     /translation="MDMTNWLQKRVRLSPKETALVFEGKEETFEEISEAVKQLAGKLF
                     ALGIRKDEMVALLGKNDRMTFLLIHALQQLGAVTLFLNNRLTKKEISFQLANAEVKHV
                     IVADSLVDKVATGISYATLAETDYEAPALLETWDLSRAASVMYTSGTTGKPKGVVQTY
                     ENHWWSAVASVLNLGLTEKDSWLCAVPIFHISGLSIMMRSVIYGIPVYLEEHFDEEKI
                     TQLLESGKISTISVVTSMLERLLKIHSGSYHPNVRTVLLGGGPASKAVLEICKQRDIP
                     LVQSFGMTETASQIVTLPPKDALNKIGSSGKALFPAEVKIADDGEILLKGPSITPGYL
                     HNKKATEASFVDGWFKTGDIGYLDEEGFLFVLERRSDLIISGGENIYPTEIEHVISEY
                     EGVKEVAVIGKPDDKWGSVPVAFIVAEETFDEAELRLICETNLAGYKIPKQITIVEKL
                     PKTASGKIQRNKLKERHSM"
     gene            complement(19078..19896)
                     /gene="menB"
                     /locus_tag="U0290_000416"
     CDS             complement(19078..19896)
                     /gene="menB"
                     /locus_tag="U0290_000416"
                     /EC_number="4.1.3.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoyl-CoA synthase"
                     /protein_id="HEM2300484.1"
                     /translation="MSFNWQTEKVYEEIKYESYEGIAKITINRPEVHNAFTPKTVTEM
                     IDAFNLARDNSNLGVIILTGEGEKAFCSGGDQKVRGHGGYVGDDQIPRLNVLDLQRLI
                     RVIPKPVIAMVAGWSIGGGNVLQLVCDLTIAADNAKFGQTGPNVGSFDAGYGSGYLAR
                     VIGHKKAKEVWFMCRQYTADEALEMGWINTVVPVADLEKETVAWAKEMLQKSPTALRF
                     IKAAFNADTDGLAGIQQLAGDATLLYYTTDEAKEGRDAFKEKRDPDFDQFPKFP"
     gene            complement(19893..20720)
                     /gene="menH"
                     /locus_tag="U0290_000417"
     CDS             complement(19893..20720)
                     /gene="menH"
                     /locus_tag="U0290_000417"
                     /EC_number="4.2.99.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-6-hydroxy-2,
                     4-cyclohexadiene-1-carboxylate synthase"
                     /protein_id="HEM2300485.1"
                     /translation="MLVNGRHYHLTTAISGEKPALLMLHGFTGTSETFQDSISGLKEH
                     FNIIAPDLLGHGNTASPEEISPYTMENICEDLAGILHQLNISRCFVLGYSMGGRVATA
                     FAATFPKRVRGLILVSSSPGLEQADIRESRVAADNRLADWIEEEGLVPFVDYWENLAL
                     FASQKVLSPEMKRRIRSERLSQNSHGLAMSLRGMGTGKQPSYWNCLANFTFPVLLITG
                     ALDEKFEKIAQEMHQLLPNSTHVSIQEAGHAVYLEQPNSFSSQLNYWLEDILKEEEK"
     gene            complement(20722..22464)
                     /gene="menD"
                     /locus_tag="U0290_000418"
     CDS             complement(20722..22464)
                     /gene="menD"
                     /locus_tag="U0290_000418"
                     /EC_number="2.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-succinyl-5-enolpyruvyl-6-hydroxy-3-
                     cyclohexene-1-carboxylic-acid synthase"
                     /protein_id="HEM2300486.1"
                     /translation="MTNHEQVLTDYLAAFIEELVQAGVKEAIISPGSRSTPLALMMAE
                     HPILKIYVDVDERSAGFFALGLAKASKRPVVLLCTSGTAAANYFPAVAEANLSQIPLI
                     VLTADRPHELRNVGAPQAMDQLHLYGSHVKDFTDMALPENSEEMLRYAKWHGSRAVDI
                     AMKTPRGPVHLNFPLREPLVPILEPSPFTATGKKHHHVHIYYTHEVLDDSSIQKMVTE
                     CTGKKGVFVVGPIDKKELEQPMVDLAKKLGWPILADPLSGLRSYGALDEVVIDQYDAF
                     LKEAEIMDKLTPEVVIRFGSMPVSKPLKNWLEQLSDIRFYVVDPGAAWKDPIKAVTDM
                     IHCDERFLLDIMQQNMPDDAKDAAWLNGWTSYNKVAREIVLAEMANTTILEEGKIVAE
                     LRRLLPDKAGLFIGNSMPIRDVDTYFSQIDKKIKMLANRGANGIDGVVSSALGASVVF
                     QPMFLLIGDLSFYHDMNGLLMAKKYKMNLTIVIVNNDGGGIFSFLPQANEPKYFESLF
                     GTSTELDFRFAAAFYDADYHEAKSVDELEEAIDKASYHKGLDIIEVKTNRHENKANHQ
                     ALWVKIADALKALD"
     gene            complement(22461..23849)
                     /locus_tag="U0290_000419"
     CDS             complement(22461..23849)
                     /locus_tag="U0290_000419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isochorismate synthase MenF"
                     /protein_id="HEM2300487.1"
                     /translation="MNTKLPLDLFNQAKRSASQDQPALFSWVTELDELVSPVKLFKKA
                     GTAFKGERFFWQNPEMTLTMTGFGVTKQFLAEKKKDAFLGLQEKIEKRLRTSVTNATV
                     DATGPIYFGGFAFDPERDTEKEWQSFKDGLFYLPLFMLTNKDGKSYLTVNLSIYSDDT
                     ESKLEAVFNQWQKIIHQEVNEAEMALLTDFKEIGKDHFLETASEIIDMINHSEDVKKV
                     VLARRMGLRFQRQVDSAIILENMLATQENSYFFLIEKGTGVFFGATPERLLAVNGDEI
                     HSSCVAGSTERGATEEADEALGNALLKDAKNLREHSYVVQMMEETLKPFTTGLSLSSQ
                     PVLLKNRDIQHLYMNITAKKKPDVSMLEMVKALHPTPALGGLPQKMGLAIIRMKEEMD
                     RGFYGAPIGWVDLKGSGEFAVAIRSGLIVDSQGLIYAGCGIVGDSVPKEELQETAVKF
                     QPMLRVLGGIKK"
     gene            24024..24962
                     /locus_tag="U0290_000420"
     CDS             24024..24962
                     /locus_tag="U0290_000420"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HEM2300488.1"
                     /translation="MANASKSALTKQTGFQKWWTLLRPHTLVASFVPVFLGTSVAMSY
                     TSFHFTRFIVMLIACFFIQTSANLFNEYFDYKKGQDDEHSVGNGGAIVRNGMRPGFIL
                     FLAIFLYILSILGGVYLSIELNWYVGLLGAICMLVGFLYTGGPYPIAYTPFGEIMAGF
                     FMGGIITFISFYIQAEFISSFIVYVSIPVMVLVGNLLLANSIRDLVPDKKNGRLTLAI
                     LLGRKWATVLFAAAFLFSYVFEIALIFTQDAPWWTLLILLSLPEAIRAVRRFIGKTSP
                     ITMVPAMKSTSKALTIFGITLALAYLLSLLSRNLFM"
     gene            complement(24996..26849)
                     /locus_tag="U0290_000421"
     CDS             complement(24996..26849)
                     /locus_tag="U0290_000421"
                     /EC_number="1.5.1.20"
                     /EC_number="2.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional homocysteine
                     S-methyltransferase/methylenetetrahydrofolate reductase"
                     /protein_id="HEM2300489.1"
                     /translation="MNLRKDLSEKVLIADGAMGTLLYSYGVDRSFEELNLSHPEDIVA
                     IHKAYIGAGADIIQTNTYGANYIKLARYGLEDEVKRINQAAIRLAKEAARGTGTYIFG
                     TIGGINGAVDARLPAAPLEEIKRSFREQLYCFLLDGVDAILLETYYDLDELKTVLKIL
                     RETTDLPVVANVSMHEPGILQNGKKLPDALEELIALGADVVGINCRLGPYHMARALET
                     VPLYDNAYLAVYPNASLPEMQEGKVIYQSDTDYFEHYGEVFRQEGARIIGGCCGTTPD
                     HIRALRKGLETTKPILEKEVRPILELVPEEVEDVDSGERLLDKVKERLTILVELDPPR
                     TFDTTKFFEGAQALDEAGVDAITISDNSLATPRISNMALASILKHEYGIKPLIHLTTR
                     DHNLVGMHSHVMGFHKLGLHDVLAITGDPTKVGDFPGASSVFDLRSVELVQLIKKFND
                     GISYTGKSLKEKARFHVGAAFNPNVLNLEKAVRLIERKVEYGADYIITQPIYDVNKAI
                     LLKEALQKANIDVPLFIGVMPLLSSRNAEFLHNEVPGIRLTDDVRERMREAEEHGHAN
                     EEGMAIARELVDAICEHFQGIYIITPFLRYDLSIELAKYAQNKQQVQIGSK"
     gene            complement(26846..28018)
                     /gene="metC"
                     /locus_tag="U0290_000422"
     CDS             complement(26846..28018)
                     /gene="metC"
                     /locus_tag="U0290_000422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cystathionine beta-lyase"
                     /protein_id="HEM2300490.1"
                     /translation="MANEYAQDTAVIKASLGIDKETGALNTPIHLSSTFHQHDFDNYH
                     AYDYARSGNPTREKVEQAIAELEGGTNGFAFASGMAAVSAALFTLSKGDHFIIAKDVY
                     GGTFRFVEQVLPRFGITHTFVDTTNIDEVAKAFQANTKLVYLETPSNPLLHVTDIRTV
                     AKLAKANGCYTFVDNTFLTPLIQKPLELGADLVIHSATKFLGGHSDILAGLIVTNNPN
                     LAEAVYFLQNSTGGVLGVQDSWLLLRGLKTLSVRMKAGTETAEKIALFLNAEPDVVAV
                     HYPGLPSHAGYDIQVEQATSGGAVLSFDLGSEEAVRELVTHLELPVFSVSLGAVESIL
                     SYPAKMSHAAVPEEERLAQGITPGLLRFSAGLEDADDLIADLKQALSFIKKGSVAK"
     gene            complement(28011..29135)
                     /locus_tag="U0290_000423"
     CDS             complement(28011..29135)
                     /locus_tag="U0290_000423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEM2300491.1"
                     /translation="MAKLKQETIAAQIGNRKCERTGAVNMPVYFSTAYQHADLGVSTG
                     YDYTRTGNPTRDALQEALAELENGTHAFATSSGMSAIQLVFQLFKTGEHIISSQDLYG
                     GTFRYFEQFGAQYNIGFSYWDGAEIADLEKLVRPETKAIFIETPTNPLMQETDIAAVS
                     EWAGAHDLLVIVDNTFYTPILQQPLTLGADIVIHSATKYLGGHNDVLAGAVIVKEERL
                     GNFFFNQLNATGAVLSPFDSWLLIRGLKTLVLRVRQHQANAEKIAAFLESHELVEEVR
                     YPGRGGMISFFIQDAALVSPLLKELELFTFAESLGGVESLITYPTTQTHADIPEELRN
                     SYGLTDKLLRISVGIEASEDLIADLSKALDAVLEGVSARG"
     gene            complement(29157..31454)
                     /gene="metE"
                     /locus_tag="U0290_000424"
     CDS             complement(29157..31454)
                     /gene="metE"
                     /locus_tag="U0290_000424"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEM2300492.1"
                     /translation="MVKAISSNLGYPRLGEKREWKRALEKFWNGTISEKELLAETKIL
                     RLHALKKQQDKGIDLIPVGDFSFYDQVLDTSVTFGIIPKRFQHDGGKVSLNTYFDIAR
                     GKNDAVASEMTKWFNTNYHYIVPELADAEPKVLDNRALYYYEEAKKELGIEGKPVLVG
                     PITYLKLGKGSDAKSFEVLLDKFIPAYVEILKELEAAGAKWVQIDEPYLATSFDKKEI
                     ALFEKVYQAFQTAVPNLKIELQTYFESLDYYEEVVNLPVAAIGIDFVHDHGDSIKALK
                     AHGFPEDKYLAAGVVDGRNVWRSDLDAKLELLTEIANYVADGKLIVQPSNSLLHVPVT
                     KLSEPDLDEVILGGLSFADQKLEEITILTKALTNGAESVAAELEESRAAVTALNESSH
                     RNNLEVQEAIANLKNVRVDRELPFAERIKLQHAWLKLPLFPTTTIGSFPQSPEVRKTR
                     ADWLKGNITDAEYNAFIEKETARWIKIQEDLDIDVLVHGEFERTDMVEYFGQKLAGFQ
                     ATKFGWVQSYGSRAVRPPLIYGDVAFTEEITVKESVYAQSLTKRPVKGMLTAPVTIIN
                     WSFVRDDVPESVVANQVGLALRKEVEALERNGIKVIQVDEPALREGLPLKQARWQKYL
                     DDAVYSFKLTTASVQNDTQIHTHMCYSDFDDIIDTISALDADVISIETSRSHGEIIST
                     FEEVTYDKEIGLGVYDIHSPRVPTVTEIQDNIRRALRAIDAKQFWINPDCGLKTRKEP
                     ETIAALQDMIKATKEVRAEYQVLEK"
     regulatory      complement(31561..31667)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(31744..32919)
                     /locus_tag="U0290_000425"
     CDS             complement(31744..32919)
                     /locus_tag="U0290_000425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2300493.1"
                     /translation="MGAKGKFWILTMVVAISGLSQGVLLPLIAIILEEKGISAGINGF
                     HATGIYLGVLLISPFIEAPLHKYGYKPIILVGGGLVAVSILAFPIWFNLYFWFILRLL
                     IGVGDHMLHFSSQTWIGAMSDPSKRGRNMAIYGLFFSLGFAIGPQLVNLAKINANLPF
                     FLSGILVLIAWGLVWFVRNDFVAEKAVIRKISFWGSLKRFSDVFKLAWVAMIPPFLYG
                     ILETGLNATFPVVGLRDGLDTMMIAMVISSFSVGTIIFQVPIGIVSDKFGRGKVLPLL
                     TGAGAVVFMLTAFVKIPVLYVVFFFVLGILLGSLYSLGLSYMTDLTPLELLPAGNILV
                     GMCFSLGSIIGPSATGMMIGIFGNQIFYFVVAGILVLGCLLLVFGARKDALEKKMGN"
     gene            complement(32984..33055)
                     /locus_tag="U0290_000426"
     tRNA            complement(32984..33055)
                     /locus_tag="U0290_000426"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33020..33022),aa:Glu,seq:ttc)
     gene            complement(33061..33151)
                     /locus_tag="U0290_000427"
     tRNA            complement(33061..33151)
                     /locus_tag="U0290_000427"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33115..33117),aa:Ser,seq:gct)
     gene            complement(33186..33258)
                     /locus_tag="U0290_000428"
     tRNA            complement(33186..33258)
                     /locus_tag="U0290_000428"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33223..33225),aa:Asn,seq:gtt)
     gene            complement(33265..33338)
                     /locus_tag="U0290_000429"
     tRNA            complement(33265..33338)
                     /locus_tag="U0290_000429"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33302..33304),aa:Ile,seq:gat)
     gene            complement(33364..33434)
                     /locus_tag="U0290_000430"
     tRNA            complement(33364..33434)
                     /locus_tag="U0290_000430"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33400..33402),aa:Gly,seq:tcc)
     gene            complement(33459..33531)
                     /locus_tag="U0290_000431"
     tRNA            complement(33459..33531)
                     /locus_tag="U0290_000431"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33496..33498),aa:His,seq:gtg)
     gene            complement(33560..33632)
                     /locus_tag="U0290_000432"
     tRNA            complement(33560..33632)
                     /locus_tag="U0290_000432"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33597..33599),aa:Phe,seq:gaa)
     gene            complement(33637..33712)
                     /locus_tag="U0290_000433"
     tRNA            complement(33637..33712)
                     /locus_tag="U0290_000433"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33677..33679),aa:Asp,seq:gtc)
     gene            complement(33717..33790)
                     /locus_tag="U0290_000434"
     tRNA            complement(33717..33790)
                     /locus_tag="U0290_000434"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33754..33756),aa:Met,seq:cat)
     gene            complement(33833..33922)
                     /locus_tag="U0290_000435"
     tRNA            complement(33833..33922)
                     /locus_tag="U0290_000435"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33884..33886),aa:Ser,seq:tga)
     gene            complement(33945..34018)
                     /locus_tag="U0290_000436"
     tRNA            complement(33945..34018)
                     /locus_tag="U0290_000436"
                     /product="tRNA-Ile"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(33982..33984),aa:Ile,seq:cat)
     gene            complement(34030..34103)
                     /locus_tag="U0290_000437"
     tRNA            complement(34030..34103)
                     /locus_tag="U0290_000437"
                     /product="tRNA-Met"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34067..34069),aa:Met,seq:cat)
     gene            complement(34146..34218)
                     /locus_tag="U0290_000438"
     tRNA            complement(34146..34218)
                     /locus_tag="U0290_000438"
                     /product="tRNA-Ala"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34183..34185),aa:Ala,seq:tgc)
     gene            complement(34241..34314)
                     /locus_tag="U0290_000439"
     tRNA            complement(34241..34314)
                     /locus_tag="U0290_000439"
                     /product="tRNA-Pro"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34278..34280),aa:Pro,seq:tgg)
     gene            complement(34325..34398)
                     /locus_tag="U0290_000440"
     tRNA            complement(34325..34398)
                     /locus_tag="U0290_000440"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34362..34364),aa:Arg,seq:acg)
     gene            complement(34408..34493)
                     /locus_tag="U0290_000441"
     tRNA            complement(34408..34493)
                     /locus_tag="U0290_000441"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34457..34459),aa:Leu,seq:taa)
     gene            complement(34508..34582)
                     /locus_tag="U0290_000442"
     tRNA            complement(34508..34582)
                     /locus_tag="U0290_000442"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(34548..34550),aa:Gly,seq:gcc)
BASE COUNT         9879 a         7799 c         6074 g        10838 t
ORIGIN      
        1 aaacgattcg tggcctctcg agaatgttta atttgttgaa tcatttcgtc gtagtgatgg
       61 gatgcataat agtaaaataa aatgtcaatt actagcaatt gcgcttgtct tgaacttgtt
      121 gcggtacttc taatttcagc ttctggagca cgagaagttt ctaaagataa atctgctttt
      181 tccttcagct tattgctacc aaaacgtgta agactaataa caatgacgtt gttcagtttg
      241 gcttgatcta cgagttgcaa gacttctgat gtttctccac tgttagaaat agcaataaaa
      301 acggctttct tcttccccgt tgcaaaagcc attgctagaa catgtgcatc ttgcgtagct
      361 aaaacatgtt tccctgcacg cagccacttt tgcgaaatat cttctgctac taaccaagaa
      421 gccccgaccc cgtatgtata aatagtatct gcttcgccga gtaattcgca tgcctctaaa
      481 actttggctt catctagttg gctagccgta tcgttcatcg tttgaatcat gttagaaact
      541 agtttttctg tgatggtatg aaaatcttca tttggttcaa tatcataata gcctttcttt
      601 tgcggttgag ccaaatctaa tgataattgt ctttttagtt ctggaaaact ttgaagtccg
      661 attgatttac agaaacggat aacggccgca ccgcttgcat ctgcttgttg agctagttta
      721 tgaatcgatg cagtagttgt aaattctgga tttgctaata ctgcttggcc aatttttttc
      781 tctgacttcg gcaaatcatt taaaatacct tctattcgat tgataatact accattactc
      841 attaactttt ctccattcca ttttccgtaa ttataccaaa aaattagtca aaaataaaac
      901 tgccagccag aagccagcag tttccattat tagttcgcaa caatatttac aagtttccct
      961 ggaacgacaa tcactttacg gattgttttg ccttctaggt tttctttcat tttgttgtct
     1021 tcttgtgcaa ttttttctag ttcttctttt tcgagagatt tggcaacggt gattttgctt
     1081 tttactttgc cgtttacttg aagtacgatt tctacttcat cttctactag ttttgtttcg
     1141 tcgtatgttg gccaagctac gtagctgatt gtttcggtgt gacctaggat ttcccataat
     1201 tcttctgcaa ggtgtggtgc gattggtgac aagagttgaa cgaaaccttc gacatattgt
     1261 tttggaatcg tatcttgttt atatgcttca ttgatgaaaa tcatcagttg cgaaatcccg
     1321 gtattgaaac gcaggttttc gtaatggttg gtaactgttt tcaccatatg atgatatgct
     1381 ttttctaagt tagcattcgc atcagttgtc actttttcag cgagtgtgcc ttcttcagtt
     1441 actagcaagc gccagatgcg gtctaggaat ttacgtgcac cttccagtcc attttcgttc
     1501 catgcaatcg aagcttctag tggtcccatg aacatttcgt acaagcgaag tgtgtctgcg
     1561 ccgtattttt ctactacttc atcagggtta acaacattac ctcttgattt ggacattttt
     1621 tcgttatttt cgccaagaat cataccttgg ttaaatagtt tttggaaagg ttcttttgtt
     1681 ggaactacac cgatatcgta caagaattta tgccagaaac gtgcataaag aaggtgaagc
     1741 actgcatgct ctgccccgcc gatataaacg tcaactggaa gccattctgc tagtttttct
     1801 ttgtcagcaa ttgcttcgct gttatttgga tcgatataac gcaagaaata ccagcttgag
     1861 ccagcccatt gtggcattgt atttgtttcg cgacgacctt ttcgaccgtt tttgtctgtt
     1921 acgtttaccc agtcatgcaa gttagcaagt ggtgattcgc ctgttcctga tggtttgatt
     1981 tctgttgctt ttggcagaag tagtggtagt tcgtcttctg gtacaagcgt tgtttccccg
     2041 tcttcccagt gaataactgg aattggttca ccccagtaac gttgtctgct gaacaaccag
     2101 tcgcgcaaac gatacgtgat tttacggcta ccgatgcctt ctttttctag ccaatcaatt
     2161 gcagcggtaa tcgcttcggc tttagctagt ccgttcaaga aatcggagtt aatatgtggt
     2221 ccgtcgccag tgaatgcttc ttttgtcacg tcgccgcctt caagaacagg acgaatattc
     2281 aaaccaaatt gttgcgcaaa ttcaaagtca cgttcatcgt gagctggtac ggccataatc
     2341 gcacctgttc catattgaat caacacgtag tccgcaatcc aaattggcac ttcttcgccg
     2401 ttgattggat taatcgcata agctcctgtg aagacacctg ttttatcttt tgcaaggtcg
     2461 gttctttcca gttcgctttt aagttctact tgttttttat aagcttcaac tgcttctttt
     2521 tgttctggtg ttgtgatttt ttcgataagt tcgtgttctg gtgcaaaaac ggtatatgtt
     2581 gcgccaaaaa gtgtatctgg acgtgttgtg aaaacattaa acgtttcatc gctatcttta
     2641 attttaaaag taacttctgc gccttctgaa cgaccaatcc agttacgttg catatcttta
     2701 atattttcag gccaatccac tagatcaaga tcatctagca aacgatctgc gtacgcggtg
     2761 attttaagca tccattgacg cattggtttg cggaaaactg ggaagccacc gcgttcactt
     2821 ttgccatcga taacttcttc attggctaaa actgtaccaa gtgccggaca ccagtttaca
     2881 gcgatttcgg cttcataagc taaacctttt tcatatagtt tttcaaaaat ccactgtgtc
     2941 catttataat attcaggatc tgttgtattg atttcacggt cccagtcgta ggaaaaacca
     3001 agtgatttaa tttggcgagt aaagttggca atattcagtg cggtaaattc ttctgggtcg
     3061 ttaccagtat caattgcata ttgctctgca ggaagaccaa aagcatccca accgattgga
     3121 tgaaggacgt tcttcccttg cattcgtttc atacgagaca aaatatctgt tgctgtataa
     3181 ccttctggat gtcctacgtg aagacctgct ccagatgggt aagggaacat atctagtgca
     3241 tagaagttat ctttattttt atcttctgtt gttttgaaag tgttatgttc actccaatat
     3301 tgttgccatt ttggttccat ttttttgtga ttaaatgtca ctttactcat cctcttttcc
     3361 ttaaaatatc gaattttggc tacaaaaaaa tccctacatc ccaacggctt atcgccatgg
     3421 gacgagagat gcttctcccg cggtaccacc cacattagtg tttgaccact caacttatca
     3481 attccttaac gcggaaaacg gggatacacc caagctccat ggtaagttca tccggatttt
     3541 gtgactgact tgcaccaacc gtcagctctc ttcacatcaa aatatgcaga ttactactcc
     3601 aattcatcgc tttttcgcaa aattcattag tcttattgta gctgaatttc atttttttag
     3661 caagcgctct gaagatttat ctaactttcc taacaaaatg tgctaaaatg aatggagaat
     3721 ttcatttgaa ggagtctaaa actagtgaaa caaacgaatc catttgtata tagcaatgat
     3781 aataaaagat atcatacatg gaactactgc ttaagagaag aatttgggca aaagacatac
     3841 aaagtggcgc ttgatggcgg ctttgattgt cccaatcgtg acggtacggt agcgcatggt
     3901 ggttgtacat tttgtagcgc ggctggttct ggggactttg ctggcaaccg agcgcttgat
     3961 ttaaaagtac aattccagca agtgcgcgac aagatgcaaa cgaaatggaa agacgggaaa
     4021 tgtatcgctt atttccaagc tttcacgaat acacatgcac cggttgccga gttacgtgag
     4081 aaatttgaaa ctgttttgaa tgagccgggt gtagttgggc tttcgattgc gacaagaccg
     4141 gactgtttgc cagatgatgt ggtggaatat ttagctgagt tgaatgaacg tacttattta
     4201 tggttggagc ttggattgca gtctgctcat gatgagactg gccgcttaat caaccgggcg
     4261 catgattatg attgttatct agaaggagtg cacaaactgc aaaagcacaa tatccggatt
     4321 tgtacccaca ttattaacgg tcttccaaaa gaaacaccag aaatgatgat ggaaacaacg
     4381 cggaaagtag tcgaaagtgg cgtggatggt atcaaaatcc atttgctcca tttattaaaa
     4441 ggaacgccaa tggtagaaga ttataaaaaa ggtgacttag aatttttaac tcgggatggc
     4501 tatgtaaact tagtcgctga tcaactagag atcttaccgc ctgagatggt tattcaccgg
     4561 attactggtg atggtggcgt agatgattta attggccctg tttggagttt aaataagttt
     4621 gaagtgttga atgcgattga tgcagaactt gttcgaagag atagctggca agggaaacac
     4681 tatcaacctg tggaagtgat ttctgaatga atttaagagg cattctcccc ttcgctcatg
     4741 atacgctacg aaaagtagtt cgtcctggtg attatgtgat tgacgccact tgtggtaatg
     4801 gacacgatac gcttttatta gcggaacttg ttggtattaa tgggcatgta cttggatttg
     4861 atattcaaca aatggctgtt gatgcgacga aggctcgttt agaaaatgcg ggtgtttctt
     4921 cgcaagtgga actcgtttgc gctagccatg cacgtatccc tgcgtacaca tccagacctg
     4981 ttcgcgccgc tatttttaat cttggatatt taccaggtgg cgacaaagaa attacaacaa
     5041 ccgctgattc gacgctagaa agcattggtc atttaatgca gctgctcgaa gttggtggcg
     5101 tcattattct cgttatatat cacggccacc ctgctggaaa aatcgaaaaa gatgctgttg
     5161 tgactttttg tgaagcaatc ccacaacaag atttccacgt tttatcttat caatttatta
     5221 atcaaaaaaa tgatgcccca ttcgtcatta tcatcgaaaa aagaaaacct agacaggcta
     5281 attaatagct ttgtctaggt tttcttttat tttccaaaat cgtatttatc tgctacgtat
     5341 acatcatacc aaatcatgaa aataacaact gtccagattt tacgactgta gtcgaattta
     5401 ccggcacagt gatcgtctag taatcctaga acgtattgtt tgttaattaa atgatctgtt
     5461 ggtgattctt taatgatgtt tttaacccaa gcgttcattt cgtcttttaa ccagtgacga
     5521 attggtactg ggaatcctag tttacggcgg ttaagtacgt gttctggtac aaatgttgct
     5581 gccgctttac gtaagatata tttggttgtt ccattggttg ttttcattgt atctggaata
     5641 tttcttgcca cattgtacac ttctttatca aggaaaggta cacggacttc cagcgaatta
     5701 gccatcgtca tgcggtcagc tttgagaaga atatcgccgc gaagccacgt atgaatatca
     5761 atgtactgca ttctttctac aggatgataa ttcgttgttt ctgcataaaa tggatctgta
     5821 atgttcgtat agtcatgacc agcttgatat tttggaagta aaatttgttt ttctttttcc
     5881 gtgaacattt tggcgtttcc gatatagcgt tcttccatcg gagtggttcc acgttctaag
     5941 aaacttttac cacgcatacc ttctggcata atgcgcgcca cgctatttag cattgattta
     6001 aatacgcttg gcattttgtt aaacatcgca agggaattcg gttcgttata aatgttataa
     6061 ccaccgaaaa gttcatctgc accttcaccg gacaatgcaa ccgttacttg tttgcgcgct
     6121 tctcttgata agaagtaaag cggaatagca gctggatcag caagtggatc atccatatgc
     6181 caaacaattt ttggtaattc tttcatatat tcttcaggtg agataacata actaatgttt
     6241 tctacgccaa gtttgtctgc tgtttctttt gcgacatcga tttcactgaa accatcgcgt
     6301 tcaaaaccaa cagagaatgt tttgattgca ggatgatatt ctttagcaat cgcagcaata
     6361 atcgatgaat caataccacc agataggaat gaaccaactg gtacatcaga gcgcatatgc
     6421 atttttacag aatcgtacat tacgtcacgc acttctttaa tccatgcgtc ttctgattta
     6481 gttactggtg caaaagatgc tttccaataa gtagtaattt ccattggttg accaattttc
     6541 ttcgtgaact gatgtcctgg ttctaaacgt tttacatttt tagttaagga atctggttct
     6601 ggaacgaatt ggtaagtcat atagttttgt aatgaaactt catccaattc tttttctttt
     6661 aaagcatgta gaatggattt cttttcagaa cccatgaaca atttgccatc ttcttctgca
     6721 tagaaaaatg gtttaatgcc aaatgggtcg cgtgcgccgt aaacaagttc ttcttgttta
     6781 tcccaaataa cgaaaccaaa catcccacga agacgttctg ctgttttttc tttgtatttc
     6841 gcatatgtag cgataattac ttcggtatca ctttcggttt caaatgtcat tccttcagca
     6901 actaattgct cacggagttc cacatagtta taaacttctc cattaaaaat aatccagtaa
     6961 cgttcatttt catacgttaa cggttgatga ccgttttcta catcaataat acttaaacgg
     7021 cggaaaccaa actgcacgtg atcatctgtg aagtatcctt catcatctgg cccacggtgc
     7081 gtaatcatac tgttcatttg tctaaaggtt tctttatcag cgccagtaat ttctgtaatg
     7141 cggtcatgta cgcatcctac aaatccacac atggtaacat ttctcctcta tatagataat
     7201 cattttatct ttttttcaca acgtctatca tatcataact agactttctt tgcactgttt
     7261 aggaaagaaa aaaaccgaac attccttaca agaaatgttc ggttaagctt attttacgat
     7321 taattttttt aaggcttctg ctttatcggt tctttcccaa ggtaaatcaa gatcgctacg
     7381 gccaaaatga ccaaatgcag ctgtttgacg ataaattggg cgacgcaaat caagcatatg
     7441 aattatccca gctgggcgta aatcaaatag ctcattaacg ccatcaatta attcttgttc
     7501 tgaatagtca cttgttccat atgtgtcaat cgaaatggaa actggacgag caactccgat
     7561 agcatacgcg acttgtactt ctactttttt agcaagtcct gcagcaacga tatttttagc
     7621 tacatacctt gcagcataag cgcccgatcg gtcaactttg gtcggatctt taccggagaa
     7681 cgctcccccg ccgtgacgcg cataaccacc gtatgtatcc acgataattt tacgcccagt
     7741 taagcccgca tcgccaagag gaccaccaat aacaaagcga ccagttggat taataaagta
     7801 tttcgtatct tcatctaaga aagaggcatc aatcacttct gggaaaaggt acgtgtgcaa
     7861 gtcttttgcg atttgctctt gcgtaatgtc cggatgatgt tgcgtcgaaa caacaattgt
     7921 atcaatccga actggttgat taaattcatc gtattccacc gttacttgtg ttttcgcatc
     7981 gggacgcaag tagtctaatt tatttgtttt acgtaattct gttaacttac gtgctaagcc
     8041 atgtgctaaa aagattggca gtggcattaa ttcttctgtt tcatctgttg caaaaccgaa
     8101 cattaatcct tggtctcccg ctccgattgc ttcaatagcc gcatcgattt ccttaccact
     8161 tcttgattct agtgcttcgt cgactccttg cgcaatatct ggggattgtt catcaatcgc
     8221 tgttaaaacg gcacacgttt ctgcatcgaa accatatttt gcacgtgtat agccgatttc
     8281 tttaattgta tcacgcacga ttttaggaat atccacataa acagaggtgg taatctcacc
     8341 tgctactaat actaaacccg ttgtcacagt agtctcacaa gcgacacgtg cgtccggatc
     8401 ttttgaaata attgcatcta aaattgcatc agatatttga tctgcaattt tatctggatg
     8461 tccatcagaa accgattctg atgtaaatag atgacggttc ttagccaatt tattttcctc
     8521 cttcaattct ctccaaatac gtctcatata aaaagcctct ctctattttg cacaaaacgc
     8581 gcacgaatag agaaaggcta taattatacc tttgctctca tcgttcagaa gataatactc
     8641 ctgcaacaga ttagcacctt tcacttatat gtgtaggttg ctgggcttca aagggtcagt
     8701 ccctctaccg ctctggataa gagataaatt ttaattctaa gatagaatac cataaactgg
     8761 tgccagatgc aataataatt cggttttgtg ttatgataaa acagtcatct atccgctaaa
     8821 attagctgaa aattagcgtt cattattttt tcacttatca ttatttgtaa cctgtggtat
     8881 gatagatgga taaaaaagat gttttactta actaaaggag attgtaacta tgagtttaat
     8941 tccactatcc ttgattattt ttcttggatt tttagcagtt ttatgtttat ttgattttgt
     9001 ttttcgttta tattggttta aatatttcct agcaactatg ggactaattg caagtggtgt
     9061 ggtatttttc attagttttt acggcggcgg gatgtcccaa acagaaatag ctattgccat
     9121 attcatcggt tcattcggtg aatatgttgt atctcttatt attagcctcg ttcgttttat
     9181 ttccagaaag tcaaaaaaac ctaaacaaaa gaaaaaagct aaaacagcct aaaaagctag
     9241 cgacatgttt gtcgctagct ttttttattt gcgtctaata agaacaagtg aagtggctaa
     9301 aaggaacata cctacgataa ctggaatagt tgatgttgta tcacctaatg ctgggatgct
     9361 ttcatttgta gcggtagtat tttgcttggt aggatttacc gttatattgg cgtttctatc
     9421 atttgtccca ttgctgccgt tattcgtatt atttccacca tcatctggtg tcggtggtgt
     9481 cggcggcgtc actttctctt ctactgtgag gcttacatcg attgtcttag ctttattccc
     9541 gtctgcatct actgcattta agtggatagt atatgttcct tttgttttca acatatttgg
     9601 atcgaaatct gtcgtgattt tagaaccatc gtccgttgta gcatgaatgt cttgtaaaaa
     9661 ttccgttacc gttttatctg ttccaacagg ataactaatt ttcttatctg ccgtaatgat
     9721 tggcgcggta gtatccttta catgaatagt aatttctaca ggtgtggctt ggttccctgc
     9781 ggcatcaaca gcatacagat gaactagata atcccctgat gtgttaacaa ttgcagggtt
     9841 ataatcggtg gttattttgg aaccgtcatc tgtattggcg ccaattcttg caagtagttg
     9901 ttgttcggtc attggtacac cacgctcgtt tgttatttct cggctggttg tttttataac
     9961 cggagcgata gtatcttgaa ctagcacatt aattttaagt ggcaatgctt tgtttccact
    10021 ttgatccgtt gcttggagta agacttcata atttcctgtt tttgttaaat cgattttcga
    10081 aaaatcagag ctgattgcgc tgttgtcact tgttgcggca ttaatatcgg tgtagaaagc
    10141 ttgctctgtt tttgtaatgc ctctttcgta agtgattgat tggtcagctg tgatgatggg
    10201 aggaatgtta tcttctactt tcattgtcac ttttacgggc gttgctttat tgccacttgc
    10261 atcctctgca tttaatgtga ctgtgtaggt accaaccgta tcaagatctt tactattaaa
    10321 atccgttgtt attgtagagc catcatctgt agttgcttca atatctgcta aaaaatccgc
    10381 ttcgttttta ttgatagttc tttcataggt gattgtattt aatgcattga taatcggtcc
    10441 ttttgtatct accacggtga tagtaacagt tactggatct gcttcgttgt tgctatcatc
    10501 ttttgcattt aatacgactt tgtaagttcc ttcttgcgta aggacagttg ggtcaaaatt
    10561 gctcgtgatg gttgatccat cattcgtcgt tgcgtggata tctgttaaaa attgagcagc
    10621 agttttggtt gttccttttg cgtaggttat cgttgtatct gctgtgataa ttggtttttc
    10681 tgtatcagcg acagtgacgg taatagtgac tggatctgct ttattgccac tttcgtcttc
    10741 tgcgtttagc gtcacagtat aacttcccgc tgtatccaga tttaccgctg tatcaaaatc
    10801 acttgtaact ggtgtgccgt catccgtttt aatagctaaa tctaggaaga atcctgtttc
    10861 ttgtttcttt tcgccgcgtt catacgtaat gcttgtggca ctagatgata ttacaggttt
    10921 ttgcgtatct tgcacaataa cagttacctt gactggcaaa gcatagttcc cattttcatc
    10981 aatagcgctt aacgtcactt gataagtccc tacttgcttc aaactatttg ggttgaagtt
    11041 agaagttact gctgagccgt cattcgttgt tgcatttaca tccgttaaaa aggcagctgc
    11101 agttttcgtg gttccttttt cgtaagtgat agttgtatct gctgtaataa ctggtggtgt
    11161 tgtatcacgt acggtaactg ttacggtgat tgggtcagat ttattgccac ctgcatctgt
    11221 cgagttaagt gtgacatcgt aatcccccgg tgtatttaaa tctactaccg ttgcaaaatt
    11281 agaggtgatt gccgagccat cgtttgtagc agcatgcaca tctgttaaga aatcagtagc
    11341 agatttggtt atgccttttt cgtaaataat cgcttcatct gctgtaatta ctggagcaat
    11401 gacatcttta actgtgacat ttactgttct tggtattgct tggtttccgc taatatcgtt
    11461 tgcctttaat gtgactgcgt agactcctgg tgtatcaaat ttcacttgat ccgcaaaatc
    11521 acttgtaatc gttgctggtt catctgttgt tgcatgaata tcagccagaa attgtgcttc
    11581 tgttcgtgta tttccctggt tataactaat cgcttcgtct gcacttataa tcggtgctac
    11641 cgtatcttct actgttacaa tgacataaat gggatcagat tggttgcccg ctgcatcggt
    11701 agcttccact aaaaccgtat aatcgcctgg cgaatccatt ctcaccatcg tatcaaaatt
    11761 ggttttaatc accgctccgg cttccgtttt tacatttaca tcgtttaaaa attgctcttc
    11821 tgttttcttg gtgtttattt catacgtgat cttgtcgtca gctgtcacaa ctggcgcttg
    11881 tctgtctact gtgaacgctt tttctgaagc ttctgatgta tgaccaattc tgtcagccgc
    11941 tgatactgac aaggtataat tgccatcatt caatgtagag agatcaattg gaactggcgt
    12001 ttgaactcga atggtagcac cactctcttc cacaccttgt tggataataa gtccattcgc
    12061 gtctttaatt gcccagttga ttttatacac gcctgcgcca ttaatatcat cttccgcaac
    12121 gacaagagcg gttgttggat tgtacggttt catgtttaca gaaataactt tcggacttcc
    12181 aacatcaact acagcgacac ttactttcac atctttcgct gtatatccac tcgccgggtc
    12241 aagtgatgca gtcacataat aaacacctgg cacattccaa tcaactgggt tttcagggtc
    12301 ttctgttagt ttaacgtatt taggatcgat ggacacgtta tccatggttt ctgcataaat
    12361 atgaaaatgc ccttcacttc gaacctctgt taaggatgta tacttcccag ctgctagagc
    12421 cacactcgtc acatcgatta ctgcagtttc atcagctgtc gaagtcataa gtgtaatttc
    12481 cttactaatt acagctgttt tcgttccttc tgttcgctta attgaagcat ctacagttat
    12541 tttctcatca tctactgcgg taactacata agtcacattg ttagcactat ctaaaccatt
    12601 aaatgcatga atagcatttg caggaactac ttcaccaact ttaaaagctc catggctatc
    12661 tgcgtagctt ttctctagtt ttggggtctc aagtgggtga agcaattgga tatttcgtgt
    12721 accagtggtt ttatttccac tacctggcaa atattcaatt tgataaagtt gctgttgtac
    12781 gcctacagta tataaatcaa acgtattttt agtgatagat tttgttatat ctgatgaatc
    12841 aattccagag tatgctttca ccccttccag ttcatcaaaa tctgcacgac gttccccttg
    12901 ataaaatgct aaaattggat tacctgtatc aagcactgga gctgattgca aattaaattc
    12961 tgcaaaaatc atcgctccat tcgggttcac atcataggtg ttcggggact ctacattttg
    13021 gatatatcca tcattattta atccgtcata gctaaagaaa ccatctactt tattgccgac
    13081 gccattaata atagtggtca atgaattatg ttgattcgtt cttaaaatct ggctatccgt
    13141 tacgttcaaa tcatttccaa gcgctaaata atatccgtta tttttattca atggctcact
    13201 gccgaaaatg ctttcttctg cgtgtgtact accacctaaa agcagacctt ttccttcact
    13261 gtaaatcaca ctgtttagcg ttgtagagga gttcatcgcc atttttttcg tctcaactac
    13321 ttgttctgac gcgatattaa caagcgcgat ataccatgtg gtgggggttg acatgaccac
    13381 aaacacattc ccatcgccac gatcttccat aaatatataa ggagaagaat ttgctaaaat
    13441 ttcaggaaca gaatcaaata aagtaatttc tttataatta ttttctgatt cacgaataga
    13501 cattttaagt tggttcgcac catttacatc tgcgttataa gccattagac ctttattatc
    13561 gattttaaga acatcggtcc tttgatattt ggcccagaaa gtgttatcta atgggttaaa
    13621 ttcattttta gtaatcgata atgaagctgg ttctaaagta taccgaataa actgtttccc
    13681 ttgagcagca tacctagctg aagctgacat gattaatgtg ttaccttcca tttgaatatc
    13741 cataaaatag gcataggtta gatctgatct tgatggaaca ccgtaactaa cgtatgattt
    13801 atgggctatt tgaaagttac catttgcatc aattgatttt acaattaatg tactaccacc
    13861 accagaatca ccgtaataat tgactacttc cccgccaaca taaaaggcag atttactcga
    13921 gttggttgta atcgatttat acgaactaaa ccatttgtca gctgcatatt gtgaattgta
    13981 attaccgtcc tcatagttaa caacacgtgc ccactccact ttttttgtgg ttcgatcgac
    14041 acgcattata atcccttgat cacggtttgg aattttattt aattgcccat tttcatttaa
    14101 aatgggggtt ccttgtatgt actgaccttg cactgttcca atcaaaataa tatcaccatc
    14161 tgaggttaat tcaaaatcct catcaatcga taatttcccg ttactttgat cactaattga
    14221 catgtctacc tcaaaattag gcaaaacttt cccttctgca gattgaaagc gattatccga
    14281 aatttccggt gaaatatcat ctggagaaat atctcccacc gattttgctt ctgctttcat
    14341 tccagtaaga caaattaatg ctagcaaaaa aatcatcata cctgtaaaaa atttactttt
    14401 cattcatccc catctccctt ttataaaccc ccatttgttt tccccatttc aaaagctatt
    14461 gccattttat tcccctattt tctccatggc aaactaatta ttcaattaac tgaaaagctg
    14521 ttttaataac ttcagctgat gcattaaaat tagccacttc atctgtagtt agtttcggtt
    14581 ctaaaatatc tatcacgcca tttgcaccaa tgattgctgg ttgtccgatg tacgtatttg
    14641 ttttttcgga aaatacagct aatggaaaaa cttgtttagc atctgttaaa atcgcatcga
    14701 caatccccgc tgcagctgtg gctattccaa aactcgtcca gcctttgccc attaaaatat
    14761 tccaaccacc accacgaact gcatctttta atgctggtaa atcaagtggt gttgttgttt
    14821 tataatccgt gatgcttacc ccgccaattt tcaccgtaga ccaagcaacg aattgtgatt
    14881 caccatgctc gccaagaacg tatccttcca cgctctttgg attaatatgt aatgcttctc
    14941 caactactcg tctcattctt gctgtatcaa gtgatgttcc cgtcccaaat actcgtgaat
    15001 aatcaaaccc agataatttc tgaataagca tcgtaatcac atcacatgga ttcgtaatat
    15061 tcacaaaaat ccctttaaac cccgatgcga taatttttgg tacaatctca gccactgacc
    15121 gacttgtttc aacgagctct tccatacgat cctcgcgcag taacgtttct ggaccaacag
    15181 ccatgacaat gacatcggca tcacctagtg cgctccagtc attcgaagtt attgtagtat
    15241 acgaattcgt catcgaagcc atatcgcgca gttctaacgc ttcactttct gctttagttt
    15301 cgattttatc tattaacaca atttcatcac aaatcccttg agttacgagg gaaaaagcca
    15361 cgtcgctccc aacatgacca gtaccaatta ttccaacctt ccgtttcaaa aaatcccctc
    15421 cacaattaat tacttgaatt taatgcgatt aattcatatt taatgatagt tttattattt
    15481 tcccacacga gttttcgagg gattgcttct ccaagtgttt cgccttcttt tgttttacgt
    15541 actgcgattg gcacatcaat tggataaatc cgataaccta atttttctag ttcaaagaaa
    15601 ttatcagaaa ttcgcttttc ttttcctttt gttacaatca ttgtgtttac ctctagtggc
    15661 atacccaatt ttcccacctc cagtttcttt aatcatagca gagattgccc ctatttgact
    15721 agtttttatc atttaagatt cgctcagctt gttgcacaat ttggaccatt cccgcatctc
    15781 gcataaaaaa gctaaaagcc ggttgtaaaa tgaatcgact taactcccct tgaatgatga
    15841 cagggccttt tgtttcaagg taatcatcta gtgattcaat ggaaataaca tccgccgcat
    15901 aaactcgttt agtaaacgtt cgttcctctg attcgaccaa ataatcagct acaaaatgaa
    15961 gttcatcact aattgcgccc gtctcttcca tgagctcgcg tttcgctgcg tctaaatttg
    16021 tttctcctgg ttcacctttt ccaccaggga attcaagccc acgaattttg tgttcggtaa
    16081 aaagccaacc gtcctctgtt ttaggtataa tgagcacatc gtctggatta ttttcctgtg
    16141 cttcaaaata gattgtaact ttgtttccaa gtgtatcatt ataaataaac aaaaactcac
    16201 ttccttttct tttttcaaaa atgtggtaag ctgtatgtaa gctgaaattt agagggtgaa
    16261 aatcaatgaa aaaaattctt atcggaggaa tccgacttta tcaaaaatat atttcgcgtt
    16321 tcactccggc tacttgtcgt ttttatccaa cttgttctgc ctatggaatc gaagcgatac
    16381 agacacatgg cgctttaaaa ggtagttacc ttgcgattag acgtatttct aaatgccacc
    16441 cgtttcataa aggcggacta gattttgtgc cacccaaaaa agagaagaat gctgattccg
    16501 agcattcctg taaagctcac catcaccatt aatcatatca tgaatcggtt tttgccggtt
    16561 catttttttc ttgcttttta agacagaata aggtattatc aaattcggac tataaatcgt
    16621 aattgctacg attcgtatat tatttaaaca agaattattt cgatttagag gagtgaaaag
    16681 attgagaaaa aagtatctta ttgccttaac tgtactattt tcagcattac tcatacttac
    16741 tggctgctca gatgagagcg ataaaaaagc gacaaagagt gatcaattaa cagtttatac
    16801 aaccgtttac cctttgcagt atttaacaga acaaatcggc ggtgagtatg tagatgttca
    16861 tagcatttac ccaccaggtt ctgacgccca tagcttcgaa cccacccaaa aagatatgat
    16921 gaaaattgcc gatagtgatt tattcttcta tatcggactg ggtatggaag gatttgtgga
    16981 caaagcggaa aaaacactcg cgaatgaaca tgtctctttc gtccctaccg ctgaaaaatt
    17041 agacttgcca aaagatccag atgccgcaga agaacatgac cacgaaagcg aagaagaaca
    17101 cgaacatggc gacattaacc cgcacgtatg gttaaatcct gtatacatgg aacaaatggc
    17161 aacagttgta aaagataaat taatcaaaga aatgcccgat caaaaagaaa ctttcgaaaa
    17221 aaattaccag gctgtcgaaa aaaaattgaa aaagctagat caagatttcc gcacagttac
    17281 aaaggaagca aaacaaaaag acttcgtgac agcacatgca gcctatagct actgggaaac
    17341 agaatatggt ctgcaccaaa ttcctattgc cggtgtatca acaagtgatg aaccttctca
    17401 aaagaaatta aaatctatcg ttgaaaaaat cgaagcagag aaaatcccat atattatgtt
    17461 agaacaaaac actaactcaa aaatagcaga tgttattcaa caagaaacaa atacaaaaac
    17521 actgacactc cacaatttag aaacacttac gcaaaaagac ttagatcaaa aacgtgatta
    17581 tctttccatt atgaacgata atttaaaagc attaaaagaa ggtcttaatt attaaaaaga
    17641 aaggcgctct gtttacatag agtgcctttc ttttaattta ttgcgttgaa tttttccaga
    17701 tgctgtttta ggtagctttt cgacaatcgt tatttgttta gggattttat aaccagccaa
    17761 atttgtttca cagataagcc gtaattcagc ttcatcaaat gtttcttctg caacgataaa
    17821 agcgacggga acactacccc atttatcgtc aggcttaccg ataacagcca cttctttcac
    17881 gccctcatac tcggaaatga catgttctat ttcagtagga taaatgttct ctcctcccga
    17941 aataatcaaa tcagaacgac gctctaacac aaataaaaag ccttcttcat ccaaatagcc
    18001 aatatcacca gttttgaacc aaccatccac aaacgaagct tctgtcgctt ttttattatg
    18061 taaatatcca ggtgtaatcg atggtccttt tagtaaaatt tctccgtcat ccgcaatttt
    18121 cacttctgct ggaaataacg ctttacctga agaaccaatt ttatttaagg catcttttgg
    18181 tggtaaagta acgatttgtg aagctgtttc tgtcatcccg aatgactgca ctaagggaat
    18241 atcacgctgt ttgcaaattt ccaaaacagc tttactagca ggcccgccgc ccagtaaaac
    18301 ggttcgaaca ttgggatgat aacttccgct gtgtattttc aacaagcgtt ccagcataga
    18361 agtcacgacc gaaatcgtag aaattttacc actttcaagc aattgcgtaa ttttttcttc
    18421 atcgaaatgc tcttccaaat atacgggaat tccgtaaata accgaacgca tcataatcga
    18481 taaaccacta atatgaaaaa tcggcacagc acagagccag ctatctttct cggttaaacc
    18541 taaattcagc accgaagcaa cagcactcca ccagtgattt tcgtaagttt gcacaacacc
    18601 ttttggtttc cctgttgtcc ctgatgtata cataacagaa gccgcgcgag ataagtccca
    18661 tgtttctaac aacgctggcg cttcataatc cgtttctgcc aaagtagcat aactaattcc
    18721 agtggctacc ttatctacta acgaatccgc tacaatcaca tgttttacct cagcgttcgc
    18781 gagttgaaac gatatctctt ttttcgtcaa acgattattc agaaataaag tgaccgcacc
    18841 aagttgttgc agagcatgaa tgagtaaaaa agtcatccga tcatttttcc ctagcaaagc
    18901 aaccatctcg tcttttctaa tccctaacgc gaataactta cccgcaagtt gttttactgc
    18961 ttcacttatt tcttcaaatg tttcttcttt tccttcaaaa acgagtgcgg tctctttagg
    19021 agaaagccgc actcgttttt gaagccagtt tgtcatgtcc atttttacac cttcaaatca
    19081 agggaatttt ggaaattggt caaagtctgg atcacgtttt tctttaaagg catcgcgacc
    19141 ttctttggct tcatcggttg tgtaatatag aagtgttgcg tcaccagcta attgctgaat
    19201 acccgctaaa ccatctgtat ctgcattgaa agctgctttg atgaaacgca aggcagttgg
    19261 acttttttgt agcatttctt ttgcccaagc tactgtttct ttttctaaat ctgctactgg
    19321 aacaacagtg ttaatccagc ccatttctag cgcttcgtcc gctgtatatt gacggcacat
    19381 aaaccaaact tctttcgctt tcttatgtcc aataacacgt gctaaatagc cagaaccata
    19441 accagcatca aagctaccaa cattcggtcc tgtttgacca aattttgcat tatctgctgc
    19501 aattgttaag tcacatacca attgaagaac attacctcca ccaatggacc agcccgcaac
    19561 catcgcaata actggctttg gaataacacg aattaaacgt tgtaaatcaa gaacattcaa
    19621 acgtgggatt tggtcatcgc caacataccc accatgaccg cgaacttttt ggtctccgcc
    19681 agaacagaaa gctttttcgc cttcccctgt taaaataatc acgccaagat tcgaattatc
    19741 acgcgctaag ttaaatgcat caatcatctc tgttactgtt tttggtgtaa atgcattatg
    19801 tacttctgga cgattaatcg taattttcgc gattccttcg taactttcat atttgatttc
    19861 ctcatatact ttttctgttt gccaattaaa actcattttt cttcctcctt caaaatatct
    19921 tccagccagt aattaagctg acttgaaaag ctgtttggtt gttctaaata aactgcatgc
    19981 cccgcttctt gaattgaaac atgcgtacta tttggtaaaa gttgatgcat ttcctgcgcg
    20041 attttttcaa acttctcatc taaagcaccg gtaatgagta gcactggaaa agtaaagttc
    20101 gctaaacagt tccagtaaga tggttgtttt ccggtcccca tcccacgtag actcattgct
    20161 aaaccatgcg agttttgcga tagccgttct gacctaattc ttcttttcat ttcaggagac
    20221 aaaacttttt gtgaagcaaa caaagctaaa ttttcccagt agtccacaaa aggcaccaag
    20281 ccctcttctt caatccagtc tgccaaacga ttatcagccg caacacggct ttctcggata
    20341 tctgcttgtt caaggccagg agagctacta actaaaataa gtccacgcac cctttttgga
    20401 aaggttgctg caaacgcagt cgcgacccgc ccgcccatcg aatagccaag tacaaaacat
    20461 ctactgatat ttaattgatg taaaattcca gctaaatcct cgcaaatatt ttccatagtg
    20521 taaggcgata tttcttctgg gcttgcggta tttccgtgcc caagtaaatc tggcgcaata
    20581 atattaaaat gttctttcaa acctgaaata ctatcttgaa atgtttcgct tgttccagta
    20641 aaaccatgta acatcagtaa agctggcttt tctccactta tagcagttgt cagatgataa
    20701 tgtcgaccgt ttactagcat attaatctaa tgcctttaac gcgtccgcaa ttttaaccca
    20761 aagtgcttga tgatttgctt tattttcatg acgatttgtt ttcacttcaa taatatccaa
    20821 acctttatgg tagctagctt tatcgattgc ttcttctagt tcatctaccg acttagcctc
    20881 gtgataatct gcatcataaa aagcagctgc aaaacggaaa tcaagttcag tagatgtacc
    20941 aaataatgat tcaaaatact tcggctcgtt tgcttgaggt aagaacgaga atatcccgcc
    21001 gccatcatta ttaacaatca caatcgttag gttcatctta tattttttcg ccataagtaa
    21061 cccgttcata tcatgataaa aggataaatc accaattagt aaaaacattg gttggaagac
    21121 aacactagca cctaacgccg aagaaacaac tccgtcaata ccattagccc cgcgatttgc
    21181 tagcattttt attttcttat caatttgtga aaagtacgtg tcaacatcgc gaatcggcat
    21241 actattacca ataaagagtc ccgctttgtc cggtaacaaa cggcgtaatt ccgcaactat
    21301 cttaccttct tccaaaatgg ttgtgttcgc catttcagcc aaaacgattt ctcgtgccac
    21361 tttattatac gatgtccatc catttaacca cgctgcatct ttcgcatcat caggcatatt
    21421 ttgttgcatg atatctagta aaaatcgttc atcacagtga atcatgtctg ttaccgcttt
    21481 aatcggatct ttccaagcag cacccggatc caccacataa aaacgaatat ctgaaagttg
    21541 ttctaaccag tttttcagtg gtttagaaac tggcatactt ccaaaacgaa taactacttc
    21601 tggtgttaat ttatccataa tctctgcttc ttttaagaat gcatcatatt ggtcaatcac
    21661 tacttcatct agcgccccgt aagaacggag tccagaaagc ggatcagcta aaatcggcca
    21721 acctagtttt ttcgctaaat caaccattgg ctgctccaat tctttcttat cgattggacc
    21781 aacgacgaat acgccttttt taccagtgca ttctgtcacc attttttgaa tcgagctatc
    21841 gtccaatact tcatgcgtat aataaatatg tacgtgatga tgtttttttc cggtagctgt
    21901 gaacggtgaa ggttctagaa ttggcacaag cggttcgcgt aatgggaaat tgaggtgcac
    21961 agggccacgt ggagttttca ttgcaatatc caccgcgcga cttccatgcc attttgcata
    22021 gcgaagcatt tcttcactgt tttcaggaag tgccatatcc gtaaaatcct tgacatgtga
    22081 accatataaa tgcaactgat ccatcgcttg tggtgctcca acatttcgaa gctcatgtgg
    22141 acgatcagca gttaaaacaa tcaatgggat ttgtgataaa ttagcttcag caactgctgg
    22201 aaaatagttt gcagctgccg ttcctgaagt acaaagtaaa acaactggac gtttcgatgc
    22261 ctttgctaga cctaaagcaa aaaagccagc cgagcgttcg tcaacatcca cataaatctt
    22321 caaaatcgga tgctctgcca tcatcagtgc aagcggagtg gaacgtgaac ccgggctaat
    22381 aattgcttct ttcacaccgg cttgcacaag ctcctcaata aatgcagcta aataatctgt
    22441 cagcacttgt tcgtggtttg tcatttcttt atgcctccta atacgcgtaa catcggctgg
    22501 aattttactg ccgtttcttg taattcttct tttggtacag aatctccaac aatcccgcaa
    22561 ccagcataga ttaacccctg cgaatcgaca attaagcctg aacgaatggc cacagcaaac
    22621 tcaccagaac cttttaagtc aacccagcca atcggtgctc cgtagaaacc acgatccatt
    22681 tcttctttca tccgaataat ggctaatccc attttttgag gtaaaccgcc aagagctggc
    22741 gttggatgaa gagcttttac catttcaagc atggaaacat ctggtttttt cttcgcggta
    22801 atattcatat atagatgttg aatatcacga tttttcagaa gtactggttg gctagataac
    22861 gacaatcctg ttgtaaatgg ttttaatgtt tcttccatca tttgcactac ataagaatgc
    22921 tctcgcaagt ttttcgcatc ttttaacagc gcatttccaa gtgcttcgtc cgcttcttcg
    22981 gtagcgccgc gctccgtaga accagctaca catgacgaat gaatttcatc cccattgacc
    23041 gcaagtaatc tttcaggagt tgccccgaaa aagacccctg ttcccttttc aataaggaag
    23101 aaataactat tttcttgtgt tgctagcata ttttccaaaa taatggcact atctacttgg
    23161 cgctggaaac gcaagcccat tcgtctagct agaaccactt tttttacatc ttctgaatga
    23221 ttaatcatat cgataatttc actcgcagtt tctaggaaat ggtctttgcc aatctcctta
    23281 aaatctgtaa gtaatgccat ttcagcttca ttaacctctt gatgaatgat tttttgccat
    23341 tgattaaaaa cagcttctaa tttgctttcc gtatcatcag agtagataga caaattaacg
    23401 gttaagtaac ttttaccatc tttattcgtt aacataaata gtggtaaata aaacaagcca
    23461 tctttaaaac tttgccattc tttctctgta tcacgctcag gatcaaaggc aaaaccacca
    23521 aagtaaattg gtccagtagc atctacggtt gcattggtta cactagttcg cagtctcttc
    23581 tcaattttct cttgcagtcc aagaaaagca tcttttttct tctccgccaa aaattgtttc
    23641 gttacaccaa aaccggtcat ggtcagtgtc atttctggat tttgccagaa aaaacgctca
    23701 cctttaaaag ccgtgccagc ttttttaaac aatttgactg gagacactaa ttcatctaac
    23761 tcagttaccc agctaaatag agccggttga tcttggcttg cgctacgttt cgcttgatta
    23821 aataaatcaa gaggcaattt agtattcata tgcttatctc tccttttaca ttcacatctt
    23881 ctattatacc aaaaatagag ctaaactgct tggtttgcgt tttttctttc atttcgttat
    23941 taattattga cgttcttgca atatttccct aaaatgaagg gtagacatct gaaacatatg
    24001 gaagtgaaaa aggagagaaa aacatggcta atgcctcaaa atctgcactt acaaaacaaa
    24061 ctggatttca aaaatggtgg acattacttc gcccccatac acttgtagcc tctttcgttc
    24121 cagtatttct tggaacatca gtcgcaatga gctacaccag ttttcatttt acacgtttta
    24181 tcgttatgct aattgcttgt ttctttatac aaacatccgc caatctattc aatgaatatt
    24241 ttgattataa aaaagggcaa gatgatgagc actcggtagg aaatggtggt gctatcgtcc
    24301 gaaatggtat gcgcccagga tttattttat tcctagcaat tttcttatac atattatcaa
    24361 ttctcggtgg tgtttattta tccattgaac ttaattggta tgtaggatta cttggcgcaa
    24421 tatgtatgct tgttggcttt ctttatacgg gaggacctta tcctattgct tatacgccat
    24481 ttggtgaaat tatggcagga ttctttatgg ggggaattat tactttcatt tccttctata
    24541 ttcaagcaga atttattagt tcgtttatcg tatacgtatc gattccagta atggtgctcg
    24601 ttggtaactt gctacttgct aatagtattc gtgatttagt acctgataag aaaaatggtc
    24661 gtttaacctt agctatcttg ctaggtcgca aatgggcaac cgttcttttt gcagctgctt
    24721 ttctattcag ttacgtattt gaaatcgccc ttattttcac acaagatgct ccgtggtgga
    24781 cgcttctgat tttacttagt ttgccagaag ctattcgcgc cgtgcgtcgt ttcatcggca
    24841 aaacttcgcc gattacaatg gtcccagcca tgaaatccac atctaaagca ttaactatct
    24901 ttggtattac attggccctt gcttaccttt taagtctatt atccagaaat ttattcatgt
    24961 aaaaaaactg gttgtcctcg tgacaaccag tttttttatt tagacccaat ttggacttgc
    25021 tgtttatttt gggcatattt cgctaattct atcgataaat catatcgtaa aaatggcgta
    25081 ataatataaa tcccttggaa atgctcacaa atcgcatcca ctaattcacg agcaattgcc
    25141 atgccttctt catttgcatg accgtgctct tccgcctctc tcattcgctc ccgcacatca
    25201 tctgtcaaac gaatcccggg aacctcatta tgcagaaatt ccgcattccg actagacaat
    25261 aatggcataa ccccaataaa aagtggcaca tcaatatttg ctttttgcaa ggcttctttt
    25321 aataagatag ctttattcac atcataaatt ggctgtgtaa taatataatc ggcaccatat
    25381 tccacttttc gctcaattaa cctaaccgct ttctctaagt tcagcacatt cggattaaat
    25441 gccgctccaa catggaatcg tgccttttct ttcagtgatt tcccagtata agaaatccca
    25501 tcattgaact ttttaattag ctgaactaat tccacagacc ttaaatcaaa caccgaagac
    25561 gctccaggga aatcacctac tttagttgga tcacctgtaa tcgcaagcac atcatgcagc
    25621 cccaatttat gaaatcccat cacatgcgaa tgcatcccaa ccaaattatg atcccgcgtc
    25681 gtcaaatgaa tgagtggttt aataccatat tcatgcttca aaatcgaagc tagcgccata
    25741 ttactaatcc gcggcgtggc aagcgaatta tccgaaatcg taatcgcatc aacgcctgcc
    25801 tcgtcaagtg cctgggctcc ttcaaaaaat ttcgtcgtat caaaagtcct cggcggatct
    25861 agttcaacca aaatcgttaa acgttccttc actttatcaa gcaaacgttc accagaatcc
    25921 acatcctcca cttcttctgg aacaagttcc aatatcggcc gaacttcttt ttccaaaatg
    25981 ggttttgttg tttcaaggcc ttttcgtaaa gcacgaatat gatctggcgt cgtgccacaa
    26041 caaccaccaa taatccgagc accttcttgc cgaaaaacct ccccataatg ttcaaaataa
    26101 tccgtgtcag actgataaat cacttttcct tcttgcatct ctggcaaact agcattggga
    26161 taaactgcca aataagcatt atcatacaac ggcactgttt caagagcacg cgccatatgg
    26221 taaggaccaa gtcggcaatt aataccaact acatccgctc caagcgcaat aagttcttcc
    26281 agcgcatccg gcaatttttt cccgttttga agaatacccg gctcatgcat agagacattc
    26341 gcaactaccg gtaaatcagt agtctcacga agaattttca acactgtttt aagctcatct
    26401 aaatcataat acgtttccag caaaatcgca tccacaccat ctaacaaaaa acagtatagc
    26461 tgctccctaa aacttcgctt gatttcttcg agtggagccg ctggaagtct tgcatccact
    26521 gcgccattta ttccaccaat cgtcccaaaa atatacgttc cagtccctct tgccgcttcc
    26581 tttgctaacc gaatggctgc ttgattaata cgcttcactt catcttctaa accatatcgc
    26641 gctaatttaa tataatttgc accatacgta ttcgtttgaa taatatccgc cccagcacca
    26701 atatatgctt tatgaatagc aacaatatct tccggatgag acaaatttag ctcttcaaac
    26761 gaacgatcca ctccataaga ataaagcaaa gtgcccatcg cgccgtcagc aattaatact
    26821 ttttcactta aatcttttct taaattcatt tcgcaacact tcccttctta atgaaagaaa
    26881 gtgcttgttt taaatcagca atcaagtcat cggcatcttc tagtccagct gaaaaacgta
    26941 ataatcctgg cgtaattcct tgcgccaaac gctcctcttc cggaacagcc gcatgagaca
    27001 ttttagccgg gtaagaaaga atactctcca ccgcgcccaa actcacagaa aataccggca
    27061 attccaaatg tgttactagt tctcgcacag cttcctcact gcctaaatca aacgataaaa
    27121 cggccccgcc acttgtcgcc tgttccactt gaatgtcata acccgcatga gaaggtaacc
    27181 ccggataatg cactgccacc acatctggct ccgcatttaa aaatagcgca attttctccg
    27241 ctgtttccgt cccagccttc atccgcacag aaagtgtttt tagtccgcgc aataacaacc
    27301 acgaatcctg cactccaaga accccaccag tcgaattttg caaaaagtac actgcttcag
    27361 ccagattagg attattggtg acaattagcc ccgccaaaat atcactatgc cctccaagaa
    27421 atttcgtcgc actatgaata accaagtctg cacctaattc taacggtttt tgaattaacg
    27481 gcgtcaaaaa tgtattatca acaaacgtat aacacccatt cgctttcgca agttttgcaa
    27541 cagtccgaat atctgtcaca tgcagcaacg gattagaagg tgtttccaag taaaccagtt
    27601 tcgtattcgc ttgaaatgcc ttcgcaactt cgtcaatatt tgtcgtatca acaaaagtat
    27661 gcgtaatccc aaaacgcggc aacacttgct ccacaaaacg aaacgtcccg ccgtacacat
    27721 ctttcgcaat gataaaatgg tctcccttag aaagagtaaa gagcgctgca gaaacagccg
    27781 ccatcccact agcaaaggca aaaccattcg taccaccttc cagttccgca atcgcttgtt
    27841 ccactttttc tctcgttggg ttcccacttc tcgcataatc ataagcgtga taattatcaa
    27901 agtcatgctg atggaaagta gacgataaat gaattggcgt attaagcgca cctgtctctt
    27961 tatcaatccc gaggctcgct ttaatcacag ccgtatcttg cgcatattca ttagccacga
    28021 gcgctcaccc cttccaaaac cgcatcgagt gccttagata aatcagcaat caaatcttca
    28081 ctagcttcaa ttccaaccga aatgcgcaat aatttgtctg taagtccata agaattccgc
    28141 aactcttcag gaatatctgc gtgcgtttgt gttgttggat aagtaatcaa actctccacc
    28201 ccgcctaaac tttccgcaaa agtaaataac tcaagttctt tcaaaagtgg cgatacgagc
    28261 gccgcatctt gaataaagaa actaatcatc ccaccgcgcc ctggataacg aacttcctcc
    28321 accaattcat gtgattccaa aaacgccgcg attttctctg cattcgcttg atgttgtctt
    28381 acacgcaaaa ccagcgtctt aaggccacga atcaataacc aactatcaaa tggcgatagc
    28441 actgcacccg tcgcatttaa ctgattaaaa aagaaattcc caagtcgctc ctcttttaca
    28501 ataaccgccc cagcaagcac atcattatgc ccaccaagat acttcgtcgc actatgaatc
    28561 acaatatccg cgcccaaagt taacggctgt tgtaaaattg gtgtataaaa tgtattatcc
    28621 acaatcacaa gtaaatcatg cgcacctgcc cattcagaca cagccgcaat atctgtttcc
    28681 tgcattaaag gatttgttgg tgtctcaata aaaatcgcct tcgtttccgg acgaactaat
    28741 ttctccaaat cagcaatctc cgccccgtcc caatacgaaa atccaatatt atattgcgca
    28801 ccaaactgtt caaaatatct aaaagtcccc ccgtacaaat cctgtgaact aataatatgt
    28861 tcgccagttt taaaaagctg gaaaacaagt tgaatcgcac tcatccctga actcgttgca
    28921 aaagcatgcg ttccattttc tagttccgcg agcgcttcct gtaaagcatc tcgcgtcgga
    28981 tttccagttc tagtataatc ataccccgtt gacactccaa gatcggcatg ctggtaagct
    29041 gtagagaagt agactggcat attgacagca cccgttcttt cacattttct atttccaatt
    29101 tgcgctgcta tcgtctcttg tttcagcttt gccataatta cctctcctcc attcctttat
    29161 ttctctaata cttgatattc cgcacgaact tctttagtcg ctttaatcat atcttgaagt
    29221 gccgcaatcg tttcaggctc tttacgcgtt ttcaacccac aatctgggtt aatccaaaat
    29281 tgttttgcat caattgcacg taacgctcgg cgaatattgt cttggatttc agtcacagtc
    29341 ggaacgcgtg gactatgaat atcataaacc ccaagaccaa tttccttatc atacgtcact
    29401 tcctcaaatg tcgaaattat ctccccgtga cttcttgacg tttcaatcga aataacatcc
    29461 gcatctagag cactaatcgt atcaataata tcgtcaaagt ccgaataaca catatgcgta
    29521 tgaatttgcg tatcattttg gaccgaagca gtcgttaatt taaacgaata aactgcatca
    29581 tctaaatatt tttgccatct tgcttgtttt aatggtaaac cttcacgtaa agctggctca
    29641 tccacttgga taactttaat gccattacgt tctaacgctt ctacttcttt acgaagcgca
    29701 agtccaacct gatttgcaac tacactctcc ggcacatcat cacgaacaaa actccaatta
    29761 ataattgtca ccggcgccgt tagcattccc ttcactgggc gcttcgttaa cgactgggca
    29821 tagacacttt ctttcacggt aatttcctct gtaaaagcaa catccccgta gataagtggt
    29881 ggacgaaccg ctctcgaacc ataagactgt acccatccaa atttagttgc ttggaaacca
    29941 gccaattttt gcccgaaata ttccaccata tctgtccgtt caaattcccc gtgaactaat
    30001 acatcaatat ccaaatcctc ttgaatttta atccagcgag ccgtttcttt ttcaataaaa
    30061 gcattatatt ctgcatcggt tatgttccct tttaaccagt cagcgcgcgt cttccgaact
    30121 tccggtgatt gtggaaaact tccgattgtt gtcgttggga aaagcggtaa tttcaaccaa
    30181 gcatgttgca acttaatccg ttccgcaaat ggcaactccc ggtccacccg cacatttttc
    30241 aaattagcaa tcgcttcttg aacttctaaa ttatttcgat gactagattc attgagcgcc
    30301 gtcactgctg cacgagattc ttctagttca gctgccacac tttccgcacc attcgtcaaa
    30361 gccttcgtca aaatagtaat ctcctctaat ttttgatcag caaatgataa gccaccaaga
    30421 atcacttcat ccaaatctgg ctcacttaac ttcgtcaccg gtacatggag caatgaatta
    30481 gaaggttgaa caatcaattt tccatccgcc acataattcg caatctccgt aagtagttcc
    30541 agtttagcat ccaagtcact acgccaaaca ttccgtccat ccaccacacc ggccgctaaa
    30601 tacttatctt ccggaaatcc gtgagctttt aacgctttta tcgaatcacc atgatcatga
    30661 acaaagtcaa tcccaatcgc cgcaactggt aaattaacaa cctcttcata ataatccaaa
    30721 ctttcaaaat aagtttgtaa ctctattttc aaatttggaa ctgccgtttg aaacgcttga
    30781 tatacttttt caaataacgc aatttctttt ttatcaaaac tagttgcaag atatggctcg
    30841 tcaatttgca cccacttggc accagctgcc tcaagttctt tcaaaatctc tacatacgcc
    30901 ggaataaatt tatctaacaa tacttcaaaa ctttttgcat cgctaccttt tccaagtttt
    30961 aaataagtaa ttggcccaac aagcactggt tttccttcaa taccaagctc tttcttcgct
    31021 tcttcgtaat agtatagtgc ccgattatcc aacactttcg gctccgcatc agcgagttct
    31081 ggaacaatat agtgatagtt cgtattaaac catttagtca tttcagaggc caccgcgtca
    31141 tttttaccac gtgcaatatc aaaatatgta tttagcgaaa ctttccctcc atcatgctga
    31201 aaacgttttg gaataatccc aaatgtaaca ctcgtatcaa gcacttgatc ataaaaacta
    31261 aagtcaccaa ctggaatcaa atcaatccct ttatcttgtt gtttttttag cgcatgtaat
    31321 cttagaatct ttgtttccgc caataattcc ttttctgaaa ttgtgccatt ccaaaacttt
    31381 tctagtgcac gtttccattc acgtttctct ccaagtctcg gataccccaa gtttgaacta
    31441 attgccttta ccatacttat caccttatcc tctccatttt ttgccaataa aaaacctccc
    31501 tagagaacta gagaggtttg gaagtttcga tacacaaata cagtgaaact ttttaagtct
    31561 ctcttatctc tcgaagcatc acacttcgca ggatttagca ccttttcaac gaattgaaag
    31621 gttgctgggt ttcaacgggc cagtccctct accactcata ataagagtaa tttatttagt
    31681 ttttttaatc acttaaattg gattgaaatc atcataccac ttgcacctaa aaactgtcaa
    31741 tcattaattt cccattttct tttcaagtgc atctttccta gctccaaata ctagcaacaa
    31801 acagccaagc acaaggattc cggctactac aaaataaaat atttgatttc caaaaatccc
    31861 gatcatcatt ccagtcgcgc tcggcccaat aatgctcccc aaactgaagc acatgccaac
    31921 caaaatattc ccagccggaa gcaattcaag tggcgttaaa tccgtcatat aagataatcc
    31981 aagcgagtat aaagatccaa gtaaaatccc caaaacaaag aagaaaacca catataaaac
    32041 tggtatctta acaaatgctg tcaacataaa aacaactgct cctgctcccg tcaaaagagg
    32101 taaaactttt cctcgtccaa acttatcact aacaatccca ataggcacct gaaaaataat
    32161 cgtccctacc gaaaaagaag aaataaccat cgctatcatc atcgtatcga gcccatcgcg
    32221 caacccaaca accggaaaag tcgcattaag tccagtctcc aaaattccat ataaaaacgg
    32281 tggaatcatc gctacccaag ccaatttaaa tacatccgaa aaacgtttca aactacccca
    32341 aaaagatatt tttcgaatta cagccttttc agcaacaaag tcattacgaa caaaccaaac
    32401 gagtccccaa gctatcaaaa ctaaaattcc agataaaaag aaaggcaagt tcgcatttat
    32461 ttttgccaaa ttaaccaatt gtggcccaat cgcaaatcct aatgagaaaa acaacccata
    32521 aatagccata ttccggccac gtttacttgg atcactcatc gccccaatcc aagtctgcga
    32581 agaaaaatgt aacatatgat cccccacacc aataagcaac cttaatataa accaaaaata
    32641 taaattaaac caaattggaa aagccaaaat cgaaaccgca actagtcctc ccccaactaa
    32701 aataatcggc ttataaccat atttatgaag tggggcctca ataaatggag aaataagtaa
    32761 aactcctaaa tagattcccg tagcatgaaa cccattaatt cctgcactta tacctttctc
    32821 ttctaatatt atcgcaataa gaggtaataa aaccccctgt gacaatcctg aaatggcaac
    32881 aaccatcgtc aaaatccaaa acttcccttt agcccccatt agatacctcc aaaactttac
    32941 taaataaaaa aacaatgtca caaattgaca ttgttcttta ggatgacccg tacgggattc
    33001 gaacccgtgt taccgccgtg aaagggcggt gtcttaaccg cttgaccaac gggccatatc
    33061 tggcggagaa ggagggattt gaaccctcgc gccgcgcgag cgacctacac ccttagcagg
    33121 ggcgcctctt cagccacttg agtacttccc cagatataaa aaacttattc ttattgaaag
    33181 aataactcca caggcaggac tcgaacctgc gaccgatcgg ttaacagccg attgctctac
    33241 caactgagct actgtggaat aaaatgggcc taaatggact cgaaccatcg acctcacgct
    33301 tatcaggcgt gcgctctaac cagctgagct ataggcccca gtaaaactat attcatggta
    33361 aaaagcgggt gatgggaatc gaacccacga caacagcttg gaaggctgta gttttaccac
    33421 taaactacac ccgcataata taatttttaa aaacaaaggg cggataatgg gaatcgaacc
    33481 cacgaatgcc tgaaccacaa tcaggtgcgt taaccacttc gccatatccg ccataaggca
    33541 aaaatgttta aaaaaagaat ggcttgggac agaatcgaac tgccgacacc ttgagcttca
    33601 atcaagtgct ctaccaactg agctaccaag ccataatggc ggtcccgacg ggatttgaac
    33661 ccgcgatctc ctgcgtgaca ggcaggcatg ttaaccccta caccacggaa ccactattgc
    33721 gggggcagga tttgaaccta cgaccttcgg gttatgagcc cgacgagcta ccagactgct
    33781 ccaccccgcg acaataatat taaattttag tccacatatc acaagtgaaa aacggaggaa
    33841 gagggattcg aacccccgcg cggtattacc cgcctgtcgg ttttcaagac cgatcccttc
    33901 agccagactt gggtattcct ccatgataat aataaagtga caagtggacc ttgcaggact
    33961 cgaacctgcg accggacggt tatgagccgt ctgctctaac caactgagct aaaggtccaa
    34021 gattgaaaat agcggcggag ggagtcgaac ccacgacctt tcgggtatga accgaatgct
    34081 ctagccagct gagctacacc gccataataa taaggcaact attttctact taaatgtgaa
    34141 gcaagtggag cctagcggga tcgaaccgct gacctcctgc gtgcaaagca ggcgctctcc
    34201 cagctgagct aaggccccat aataataagg gattaaacta tcgggaagac aggattcgaa
    34261 cctgcgaccc cttggtccca aaccaagtgc tctaccaagc tgagctactt cccgtttaat
    34321 aaagtgcgcc caagaggagt cgaacctcta accgcttgat tcgtagtcaa gtactctatc
    34381 cagttgagct atgggcgcaa ataaaagtgc cgaggaccgg aatcgaaccg gtacggatat
    34441 cactatccgc aggattttaa gtcctgtgcg tctgccagtt ccgccacccc ggcgttgcta
    34501 taaaatatgg agcggaagac ggggttcgaa cccgcgaccc ccaccttggc aaggtgatgt
    34561 tctaccactg aactacttcc gcatattcca
//
LOCUS       DASDYO010000009        34346 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.009, whole genome shotgun sequence.
ACCESSION   DASDYO010000009 DASDYO010000000
VERSION     DASDYO010000009.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 34346)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34346)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34346
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.009"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            391..885
                     /locus_tag="U0290_000443"
     CDS             391..885
                     /locus_tag="U0290_000443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HEM2300494.1"
                     /translation="MKKIISLLVAFVCLWSILLPGHEADAAAKINSWDLVDSSKHLDY
                     SGNSKYMSFIRSGANTWNAYKKGVIRPASGANKSDVYCSDISANNNINATTYSNGKIT
                     FNKKNMDKKNNAGKQNVATHELGHGLRLGHNASSDVMYQYSTSKTTLSTNDKQSYDAA
                     YKKY"
     gene            901..1521
                     /locus_tag="U0290_000444"
     CDS             901..1521
                     /locus_tag="U0290_000444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HEM2300495.1"
                     /translation="MKKTTMGIIASAISILTIGCFLTINTYAEKAEPKKKEVPTYAIF
                     SDYTLDVDNPDEVVEDADYVFVGKVTEETGTIYKNKTPIEQEDGSIEYIGEAYTNYKV
                     EVISNLKNELTLNKEIALEKQGGIREDGSAYDVFEDDQLPEEGEIYIFTAYTQDDGSL
                     LVAGGNSTISFDEKTKNIDTEKEVSKTEEFELYEEAVENQVTSNEN"
     gene            1925..3694
                     /locus_tag="U0290_000445"
     CDS             1925..3694
                     /locus_tag="U0290_000445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2300496.1"
                     /translation="MKIYKALGWFFKENWKSYAFGVTILFTIALLQLVPPQIIGYTVD
                     AVTNDSLTKDKLIKWMIILVVAAILAYGGRYVWRMLIFGSDNKLQRTLRLRLFEHFTK
                     MSPFFFQRYRTGDLMAHATNDITAIQQVAGIGVLTLSDSVLTGGTVIATMAITIDWRL
                     TLIALLPMPFMVLGSSILGKKLHDRFHGAQAAFSMLNDKTQESISGIKVTRTFGQEKE
                     DIQDFAKQTKEVVQKNISVAKVDAMFDPMISIIVGISFVLSLGFGAKFVVDGELTIGQ
                     VIAFSNYLFLLIWPMLAFGFLYNIIQRGNASYDRVQHLLAEKEDVLDQEGALDTVPVG
                     DLQVAMDKFTYPDESEPVLSDIHFELKAGETLGIVGRTGSGKTSLLKLLMREYDTYEG
                     KIAFANVKIQDYTVRALREAIGYVPQDQFLFSTTVRDNIRFGKPDAPQEEVTKIAKLV
                     AVDEDILGFENGYDTIVGERGVSLSGGQKQRLAIARALIMNPELLILDDALSAVDAKT
                     EEQILANLKENRSDKTTIISAHRLSSVEHANLIIVIDKGQIVERGTHKELMALDGWYA
                     EMFHEQQLEEALEEGGAADGSDE"
     gene            3678..5483
                     /locus_tag="U0290_000446"
     CDS             3678..5483
                     /locus_tag="U0290_000446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300497.1"
                     /translation="MEAMNEQDEMLVMSGKEHREVLKRMLSYTKYHIPSLIWTGVLVL
                     LVTLADVFAPILIKIFLDDYLTPMNLEMQALLILGAGYLGLTIGKSVVWYFQLLFFQK
                     IALEIVQQMRIDIFTKLHSLGMRYFDKTPAGSIVSRVTNDTEAVKDMFINVLSTAIQS
                     LFMLVGIYAAMFALNVQLALYSLLLFPLIVFIIFVYRKYSSQFYRARREKLSQLNAKI
                     AESISGMSIVQQFNQERRLVKEFEKINKDYYDVGMKNIKFNALLLGPAIDLIYALAVV
                     IILSFFGAESLIGPVAIGTIYAFISYFDRFLEAIYNVMERLAMYQEAITAASRVFRIM
                     DETEEVPAQLNDPEAKITRAKIEFKDVSFAYEGGRDVLKNISFTAEPGQTVALVGHTG
                     SGKSSIINLMMRFYEFERGDILIDGKSIKSHEITELRKKTGLVLQDSFMFYGDINTNI
                     RLYDKSITDEQIVDAAKFVQADGFIQTLSDEYNHKVIERGASFSSGQRQLISFARTVV
                     TNPQILVLDEATANIDTETESLIQTGLKRMREGRTTIAIAHRLSTIKDADLILVLSKG
                     RIIERGTHDTLIAEEGVYHSMYQLQNSGMDLDEAL"
     gene            5564..6052
                     /locus_tag="U0290_000447"
     CDS             5564..6052
                     /locus_tag="U0290_000447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CcdC family protein"
                     /protein_id="HEM2300498.1"
                     /translation="MSLIISIIITLVFGAGIIMIRMKASKRPASVKGIIIPPIMMSTG
                     ALMFVIPFFRVSWVDILEAIAMGLVFSVILIWTTKFEIRHKYVFIKRTKAFPVILMGL
                     LLIRIFIKYWISGSLEVGELSGMFWIMAFAMIVPWRIVMYFQYKNTEKELNKVEVSGE
                     YE"
     gene            6226..6741
                     /locus_tag="U0290_000448"
     CDS             6226..6741
                     /locus_tag="U0290_000448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300499.1"
                     /translation="MKKWLLVVLTLALGLSLAACSGSNSSDKKEDTKKETTSDKDKVL
                     NYYMDLVDVVNENNGDYNAYVGAVGADPKPSEADLAALAKPASESALKVSEALASEKT
                     PDLGKSTDDFKAAVKQLSDAYKLEADALKASGRDTTKADEAMAKADEAIAGVLKDAGL
                     NPSSITTDTAS"
     gene            complement(6783..7391)
                     /locus_tag="U0290_000449"
     CDS             complement(6783..7391)
                     /locus_tag="U0290_000449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-acyl-sn-glycerol-3-phosphate acyltransferase"
                     /protein_id="HEM2300500.1"
                     /translation="MFYHFAKNLVHFILIIIGGRFQVQNKDKIIEAPYVVVSTHTSWI
                     EILYLGFALSPTPVHYMAKQELFKGKFLNWLMTHLNAFPVNRDNPGPSAIKAPIRMLK
                     SGKVVGIFPSGTRKTTNLHLKRGAVTIAHKAKVPMLPAVYDGPKTFGEILKRKKIIIR
                     FGDPVLFNDTELDQKELLEVKSQELMATFEQLQNEINQTKNK"
     gene            7507..8631
                     /locus_tag="U0290_000450"
     CDS             7507..8631
                     /locus_tag="U0290_000450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HEM2300501.1"
                     /translation="MKFLHTADLHLGKIVSGVSMLAEQEYILAQITKIAEEEQVDALI
                     LAGDLYDRAVPPADAVKVLNDILVKWNVELGIPIFAISGNHDSAERLAFGSQWYESSK
                     LYMKGKCTSQFEAISFMDAEVWLVPYHEPAIIREAFADNSIRSFEDAMQAVTKQIRSK
                     WDTSKAQILVGHAFVSGGIPSDSERQLAIGNVDRVSTDCFDGFTYTALGHLHHPHAIR
                     HPSIFYSGSPLKYSFSEANDHKSVRIVELEGKELVSVTERFLTPKHDMRIISGTLAEL
                     TENLVENPDDFFQVNLMDEGALIDPMGKLRQFYPNILHLERKKQTLKETQDNFEEIMK
                     KDDLELFGQFFEHVNGTELTETQKQKLADVFEQARKEDAE"
     gene            8628..11699
                     /locus_tag="U0290_000451"
     CDS             8628..11699
                     /locus_tag="U0290_000451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC family ATPase"
                     /protein_id="HEM2300502.1"
                     /translation="MRPIKLTMQAFGAYAKKEVIDFEKLGTEQIFVISGKTGAGKSTI
                     FDAISFAIFGKANTFDRESFSMRSHFATDKEITEVTLAFRLKDKIYQISRIPQQEIAK
                     QRGNGTTTSPQKAELYELIGDEMKLLASSVRDVNAKMEELIQLNVDQFRQILMIPQGE
                     FRELLVSDSKEKEVILQRLAHTAYYEKVENLLWEKQKQAEILVVEARKKVAELAELSL
                     PDGEVSGKTTSEISVLQNEAIQKEQAILTELENKLSIIRKQTSEAVEKVTLAKEQLLD
                     WQNLDKYTEEVATLEAEKDFYQTIEVRMEAAKRASNLQSQDALCIRLKEQLETAEQTE
                     KQVALEAEQVKAQFSHAKKQKEALAEKEAELEINKRTLFQLEEMEPKILELETVLIQK
                     RRAELDWKKTTTLLEKIIDKEQKIATELQSVEARLAEINKAELMYLEVINKRTTLEAR
                     IEKEQELVNKRIKMEEWAAAKQTEEQTLAQLLIEKAEMERTIKQEETKLEKEQTATIA
                     AHLHEGDACPVCGSQSHPILAKFGETADLETLEIAKAKLQEKQLVITTTEKAISQLEW
                     QLNEWADMKEQSLAEIQQTLAENIQLATNLREQITQLQSEVAQKETVQATLESLKNRQ
                     NETLTEKNKMALEVEKLHQQVQLTEGKRTYLEQSIPDELRDKAVFDNKMKELSSKIET
                     HIKQAEQIDALFRQAEKETTRLESTLHSAQKTTVDAKEALQVQREIFKEAMKQNDFLS
                     YDAYKQALLSVEELKNLEEKLAEYERKRHLAVSRQADLKEKLQNKQKPNMEQLEFIMK
                     EKQLELSQSEENTMKQREFVAKRKELVENYQNSIQAVEQAEENYADIGLLADAARGKN
                     ARRLTFERYILAMFLDTIIHRANHRLSKMTSGRFELQRKMEKAKGNVQSGLELEVFDE
                     YTGLTRHVKTLSGGESFKTSLALALSLAEVVQEMAGGISLETMFIDEGFGTLDPESLE
                     AAVECLLETQENGRLVGIISHVPELKERISARLEVTATNHGSTTKFITASS"
     gene            11783..15001
                     /locus_tag="U0290_000452"
     CDS             11783..15001
                     /locus_tag="U0290_000452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM2300503.1"
                     /translation="MEHFTAIQNKMIPYSVKQAGKKLMEDGEIIQFREKDASDHFSTY
                     FIDQNVVEDAGNENYACSCADFQLNAICKHIYATHLKMEKEKQKAAKQDFKNRILTQE
                     SNTLLSLFQQNMAQQLEVEEDNTNKTPLQTQYIIRLKPDDSSYIMTIEVKVGTERTYV
                     VKNMNTFLAAIRDRQWLVFTKNFAYDPNEHFFLEEDKQILDKLLQISEIAKMYDTDSF
                     YWSKSYAEEKNLTIPPSMASDLLELLTERDTTCIIMKERVEDIKYRGINVRHDNLDFI
                     FELKKSAEDKYQLEMEDLQQAIFFEAYQLLFFDGTFFIPAKEVWESLKPLMEFHKVTK
                     NEVVQFSESQLSEVISYVLPALQKSGKLKLDDSIEDRITQQPLDCKLFIALEYGEHTL
                     RLEYHYGNQLFDPFATSEEENEKIMIRDVEKEARVMNIIESAPVHFSGTKMVVNKQEK
                     DLYQFYYRTIPKLAEYAEIYMEDGLEEMVEENVRPVTTLDVSGDNDYLSVSFDFKGIP
                     EEEVQNVLESLREKRSYHRLKSGRFLSLESENYKQMEDVLQMLEVRKKDVQANMQVPL
                     YRGMQIYDILGAGTQDEHHKFSRSFRELLTDITTQSEDSFALPKGLKAELRDYQLTGF
                     EWMKSLAKYNLGGILADDMGLGKTVQTISFLASELEDNPNLKPVLIITPASLLYNWQS
                     ELEKFAPTIPVTVLHGTKQSRIAEMEEMKHGHVYLISYPSLRQDIVHFADVAFSSVII
                     DESQAIKNYHTKASQAVRALKRNHVFALSGTPLENSIDELWAIFQTLMPGFFPSLRKF
                     KEIPYDNIAKMIRPFLLRRLKQDVVKELPDKIETNLYSELTDEQKTIYLAYLEKIQAD
                     LEASNGNASEERIKLLAGLTRLRQICCDPSLFVENYQGESGKLLQLFDTIQTARENGK
                     RILLFSQFTGMLGIIRQKLEEDGQTLFYMDGKTPSKTRLDMVNAFNEGENDIFLISLK
                     AGGTGLNLVGADTVILYDLWWNPAVEEQATGRAHRIGQKRVVQVFRMITKGTIEERIF
                     DLQKKKQALVDELIQPGEQMLGKLSTEEIKQILQLDNGRDDK"
     gene            15001..15423
                     /locus_tag="U0290_000453"
     CDS             15001..15423
                     /locus_tag="U0290_000453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein"
                     /protein_id="HEM2300504.1"
                     /translation="MKKWEVFAVQNVEAAEEIINKLVSEGYEKEDISVLAKSKHNKNL
                     ETLAEKENIEIERPVNEEAFGIISGILQSLSGAIVIPQAYNPKYGALYAAGPFAKWFS
                     KTDDKSVKRLLEDFDLTEKQVDKMIENLHADNILIFAR"
     gene            15447..16250
                     /locus_tag="U0290_000454"
     CDS             15447..16250
                     /locus_tag="U0290_000454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEM2300505.1"
                     /translation="MQIKEFLISRRSELVNMFYENYYIETDEFKLRLRGGEEEEAIRS
                     LSTASCGMIIDVITGVKERDFESIGKRRFNDKTDIRKIHQHMSEVEKYIITSLVKWKE
                     AENVFYTDADIIQFMLDIKDTLSSIQQQLLEGFMQENRNQVAAQRKEIIQLSTRIIPI
                     NDSIGVLPIVGSLDDDRGYFMKEKAVESADKLNLDTIVIDFSSAVLKDDFATKHMEDM
                     IQSFKLIGLVPILSGMRPSFAQRTIQVGSNISKLESFGSLEQALTNLGV"
     gene            16405..19107
                     /gene="acnA"
                     /locus_tag="U0290_000455"
     CDS             16405..19107
                     /gene="acnA"
                     /locus_tag="U0290_000455"
                     /EC_number="4.2.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aconitate hydratase AcnA"
                     /protein_id="HEM2300506.1"
                     /translation="MTNWKEKAKASFQLNDKTYHYYKLKTLEEDKLTNIEKLPYSVRV
                     LLESVLRQADGRVIKDSHVEDLAHWSKDGNEGEVPFKPARVILQDFTGVPAVVDLASL
                     RKAMADLGGDPEKINPEIPVDLVVDHSVQVDSYANPEALKINMELEFKRNMERYQFLN
                     WAQKAFDNYRAVPPATGIVHQVNLEYLANVVIANEVADGEFVAFPDSLVGTDSHTTMI
                     NGIGVLGWGVGGIEAEAGMLGQPSYFPIPEVIGVKLLGALPNGATATDFALKVTQVLR
                     EQKVVGKFVEFYGPGVATLPLADRATVANMAPEYGATCGFFPVDKEALNYLKLTGRDK
                     EQIELVEAYLEANDLFFTPEKVEPNYTQIVEIDLSAIEPNLAGPKRPQDLIPLSKMKE
                     TFRESITAKAGNQGFGLDKSALDKEVTVTFGNGDQSTMKTGSVAIAAITSCTNTSNPY
                     VMLSAGLVAKKAVEKGLEVPKFVKTSLAPGSKVVTGYLEKAGLLPYLEKLGFDLVGYG
                     CTTCIGNSGPLKEEIEEAIQDSDLLVSAVLSGNRNFEGRIHALVKANFLASPPLVVAY
                     ALAGTTNVDMLTEPIGRGNNGEEVFLDDIWPSSEEVKALVEETVTPELFREQYAHVFD
                     ENEAWNAIETTEDALYKWDENSTYIANPPFFDNLAKEAGKVESLSGLRVIGKFGDSVT
                     TDHISPAGAIGKDTPAGKFLQEEGVAIRDFNSYGSRRGHHDVMMRGTFANIRIKNQIA
                     PGTEGGYTTYWPTGEVMSIYDASRKYIENNTGLVILAGDDYGMGSSRDWAAKGTNLLG
                     IKTVIAKSYERIHRSNLVMMGVLPLQFQPGEDAETLGLTGSESLQVEIGEEVAPRDLV
                     KVTAVREDGSSFTFEALARFDSEVEIDYYRHGGILPMVLRGKLK"
     gene            19207..19440
                     /locus_tag="U0290_000456"
     CDS             19207..19440
                     /locus_tag="U0290_000456"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300507.1"
                     /translation="MRYQKISFIVTGIIAAVIGYLIFTSNYHPDVPNWLLFLFLALSI
                     AVAVSQWKEKRLIWSCVGLFVAVLISVYYILTI"
     gene            19453..20034
                     /locus_tag="U0290_000457"
     CDS             19453..20034
                     /locus_tag="U0290_000457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase I"
                     /protein_id="HEM2300508.1"
                     /translation="MSEELRCPWSINDPFELEYHDTEWCVPSKDDTYLFEMLNLEGAQ
                     AGLSWRLILHKRKAYQEAFFHFDIDKCARLTDDELATIVEEAAIVKNRLKVKAVRTNA
                     LATQKVQAEFGSFANYIWGFTNNDRIINEWQGMGEVPASTELSEKISKDLKKRGFKFV
                     GPVIVYSYLQAIGILDDHLRSCPFHTFNREATK"
     gene            20031..21005
                     /locus_tag="U0290_000458"
     CDS             20031..21005
                     /locus_tag="U0290_000458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEM2300509.1"
                     /translation="MIPAKLKQGDEIRIIAPSRSIGIMADNQVEIAVKRLTDMGFKVT
                     FGEHVAEMDCMMSSSIRSRVADIHEAFNDSSVKAILTVIGGFNSNQLLPYLDYELISE
                     NPKILCGFSDITALATAIYTQTELITYSGAHFSSFSMEKGLDYVMDSFSKCLLQKEPF
                     ALKESAAWSDDEWYLDQENRNFIPNEGLVVMQPGEAEGIIIGGNLCTLNLLQGTEYMP
                     NLAGTILFIEDDFMTVPETFDRDLESLLSQPGAGEIEGLVIGRFQQKTAMTAEKLAYI
                     IETKTALQKIPVISGADFGHTQPIATFPIGGTARIDTNQTDKIQIIRH"
     gene            complement(21042..22109)
                     /locus_tag="U0290_000459"
     CDS             complement(21042..22109)
                     /locus_tag="U0290_000459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM2300510.1"
                     /translation="MIALVKNEFTKLFSRKSSWIMQIVLFVAVLALALLMFFVSKIDT
                     SGIEGGDASNAGITAYYDDKGAPVSEEEYWNSADKDGNPTYKSETLSLTDSVAYLKTQ
                     EQAAPTKEAKETIQKQIDFYQAYVDADEKPASNSAGISSADFFASLGSSGAVATMLVV
                     VVASIIVATEFSGGTIKLLLTRPYSRSQILFSKYVMCIVYSIISSITLLVASFIFSFI
                     LPKQSIFMPLSPSTGAMTAFEHAWMLLGTNFLLMIVYATIAFFFSSVVRSQALAVGVG
                     VGVLFSGGIIRQLLPLAIEKYDWMKWIIFNLLSLNDTVGGSKIAGGLADWQIIAGLGV
                     YTAIILFFTFFLFKKRDVALS"
     gene            complement(22106..23026)
                     /locus_tag="U0290_000460"
     CDS             complement(22106..23026)
                     /locus_tag="U0290_000460"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300511.1"
                     /translation="MTETVLKLEHVTKKIGQKNIVHDISFDIHKGEVFGLLGPNGAGK
                     TTIIRSIVGLIRRSEGTVFINGKNVDTEYKAAISEVGAIIENPEFYMYMSGWANLKQF
                     ARMSQKNITDEHVREIVELVKLTGAINQKVKTYSLGMRQRLGVAQALIHSPALLILDE
                     PTNGLDPQGMAEFRTLIRDLATNGTSVLISSHLLSEIQQITDRFAIINKGVLTHIEKM
                     SDLIENHVAAYKLKVSDPEATKTVLATLPVKLVAQNEDLFKIEVAHEDVHLIARALIQ
                     ANIDLLEMVPLQASLEERFLELTKGGGAEV"
     gene            complement(23110..23538)
                     /locus_tag="U0290_000461"
     CDS             complement(23110..23538)
                     /locus_tag="U0290_000461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HEM2300512.1"
                     /translation="MIQATVPYFTFDGEATEALDFYKKVFQAEITQMRYFHELEGFSG
                     DKKQGERILHARLTKDEKDLFYFSDTLEGETDAGNRLALAVNFSSEADFVHAFVLLSK
                     TGTIEIPIQNTFWDAKYAKVIDHYSIDWHLNLENESTTKV"
     gene            complement(23661..26261)
                     /gene="lap"
                     /locus_tag="U0290_000462"
     CDS             complement(23661..26261)
                     /gene="lap"
                     /locus_tag="U0290_000462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adhesion-mediating acetaldehyde/alcohol
                     dehydrogenase LAP"
                     /protein_id="HEM2300513.1"
                     /translation="MAIKENAAQEVLEVQKVIDRLADNGQKALKAFESYNQEQVDNIV
                     HAMALAGLDQHMPLAKLAVEETGRGLYEDKCIKNIFATEYIWNNIKNNKTVGVINEDV
                     QTGVIEIAEPVGVVAGVTPVTNPTSTTLFKAIIAIKTRNPIIFAFHPSAQRCSSAAAK
                     VVYDAAIAAGAPEHCIQWVEKPSLEATKQLMNHDKVALVLATGGAGMVKSAYSTGKPA
                     LGVGPGNVPAYIDKTAKIKRSVNDIILSKSFDQGMICASEQAVIVDKEVAKEVKAEME
                     ANKCYFVKGAEFKKLESYVINPEKGTLNPDVVGKSPAWIANQAGFKVPEDTKILVAEI
                     KGVGDKYPLSHEKLSPVLAFIEAANQAEAFDRCEEMLVYGGLGHSAVIHSTDKEVQKA
                     FGIRMKACRIIVNAPSAQGGIGDIYNGFIPSLTLGCGSYGKNSVSQNVSATNLLNVKR
                     IADRRNNMQWFKLPPKIFFEKYSTQYLQKMEGVERVFIVTDPGMVQFKYVDVVIEHLK
                     KRGNDVAYQVFADVEPDPSDVTVYKGAELMKDFKPDTIIALGGGSAMDAAKGMWLFYE
                     HPEASFFGLKQKFLDIRKRTFKYPKLGGKAKFVAIPTTSGTGSEVTPFAVITDKENNI
                     KYPLADYELTPDVAIVDAQYVTTVPAHITADTGMDVLTHAIESYVSVMASDYTRGLSI
                     RAIELVFENLRESVLTGDPDAREKMHNASALAGMAFANAFLGINHSLAHKIGPEFHIP
                     HGRANAILMPHVIRYNALKPKKHALFPRYESFRADEDYARISRIIGFPAATTEEGVKS
                     LVDEIIKLGKDVGIDMSLKGQNVAKKDLDAVVDTLADRAFMDQCTTANPKQPLVSELK
                     EIYLEAYKGV"
     misc_binding    26763..27004
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     misc_binding    27053..27279
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            27347..28711
                     /gene="trpE"
                     /locus_tag="U0290_000463"
     CDS             27347..28711
                     /gene="trpE"
                     /locus_tag="U0290_000463"
                     /EC_number="4.1.3.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465158.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate synthase component I"
                     /protein_id="HEM2300514.1"
                     /translation="MRKTKKIDADTLTAILAFQRLSGTGKSLLEGAAKDAEAGRYSII
                     AINPVHEIKVYQHDYYIDGIHQVVADPLKEIELFIEKAKEDEADLPLDSGAIGYVGYD
                     VIALYENLGEIPVETRDMPDIRFYVYESFVIMDHQAEELILVQDNCYSGRSEAELDKA
                     LELMFTELTTPKKEEHKAVHVPKMTYKSNYTKEEYMGLVKKAKTYIQEGDFFQIVLSQ
                     RLEADFTVTPFDYYRKLRLLNPSPYLYFIDFGDTVLIGSSPESLIKTKGRTVITNPIA
                     GTRRRGATKQEDELLASELLSDEKELAEHRMLVDLGRNDIGKIAETGSVHVPVYLTIE
                     RYRFLMHLVSVVEGTLKPGLTAMDALRSTLPAGTVSGAPKIRAMERIYEWENVKRGPY
                     AGAVGYLTKNGDSDFALSIRTMVLHNGKAYVQAGAGIVYDSDPESEYLETLQKAKALL
                     EVGE"
     gene            28708..29313
                     /locus_tag="U0290_000464"
     CDS             28708..29313
                     /locus_tag="U0290_000464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEM2300515.1"
                     /translation="MILLIDNYDSFTFNLEQYLAEFSEVVVKRNDATDLMEMAALADG
                     IVLSPGPGKPSDAGLLEEVVAKFAKEKPLLGICLGHQAIGEVFGGDVKRAAKIRHGKV
                     STMRQTAGAIFANLPEEMPVMRYHSLIVDKNTLPQVLEVLAVATDDAEVMAMKVKDYP
                     VYGLQFHPESIGTNDGKQMMENFIHIVEGARENGNLTTKSI"
     gene            29285..30304
                     /gene="trpD"
                     /locus_tag="U0290_000465"
     CDS             29285..30304
                     /gene="trpD"
                     /locus_tag="U0290_000465"
                     /EC_number="2.4.2.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anthranilate phosphoribosyltransferase"
                     /protein_id="HEM2300516.1"
                     /translation="MEILLQKVYDQENLSKEEMTMIATEIFEGRLSKTKIAAFLMALK
                     VKGETAEEMAGIAQAMQRVAIQVAFPAGTAMDNCGTGGDKSNSFNISTTSAFVLAAAG
                     IPVAKHGNRSISSRSGSADVCQELGIDINMRPEDMTYLLEKVGIAFLFAPHVHPNMKY
                     VMDVRKELGTPTIFNLIGPLTNPVHLETQLMGIYRRDLLEQTAEVLGQLGRKRAVVLN
                     GAGFMDEASLAGENHYALYENGEVHLYTLRPEDVGLTSYPLEAITGGEAKENAAILRS
                     VLDGEPGAYLDTVLLNAGFGLFANGKVTTVQEGVDLARDLIRSGLAKQKLADLITYQK
                     EVLAK"
     gene            30301..31059
                     /gene="trpC"
                     /locus_tag="U0290_000466"
     CDS             30301..31059
                     /gene="trpC"
                     /locus_tag="U0290_000466"
                     /EC_number="4.1.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="indole-3-glycerol phosphate synthase TrpC"
                     /protein_id="HEM2300517.1"
                     /translation="MTFLEEILAQKAVEVADMPLEKVAEKRKTYSFYEFLKANTSTMQ
                     LIAEVKRASPSKGEINIGVNPVLQAKSYQAAGAGMISVLTDPVFFKGSIEDLREVAKN
                     VEIPVLCKDFIISEKQLIRARNAGATVVLLIISALTEEMLIALFEQALALDLEVLVEV
                     HDQKELAVAQKIGAKLIGVNNRNLHTFEVDIAVSERLASDFSSDACFISESGFRTAED
                     VARVSQKYNAVLVGEALMREATPEAAAKSLKVTR"
     gene            31056..31664
                     /locus_tag="U0290_000467"
     CDS             31056..31664
                     /locus_tag="U0290_000467"
                     /EC_number="5.3.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylanthranilate isomerase"
                     /protein_id="HEM2300518.1"
                     /translation="MIVKICGLKKAVDVAAAVDNGADMIGFVFAKSKRQVTVEKAHEL
                     AKNIPADVKKVGVFVNPTEEELTAAIKGVPLDIVQLHGQEPAKQANRTDAKVIKAFPV
                     KDGKLPTNINDYPNAYILLDAPAEEYEGGSGKTFDWDKINRDMLTKNKLIIAGGLNAQ
                     NVQEAIKRFEPYAVDISSGVETNGEKDPEKIKCFIKTAKGVE"
     gene            31667..32869
                     /gene="trpB"
                     /locus_tag="U0290_000468"
     CDS             31667..32869
                     /gene="trpB"
                     /locus_tag="U0290_000468"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit beta"
                     /protein_id="HEM2300519.1"
                     /translation="MTYQAPDENGFYGKFGGRFVPETLMKAVKELDEAYRASKTDPAF
                     QKELNYYLKEYVGRETPLYFAEQLTAHAGGAKIYLKREDLNHTGAHKINNTIGQALLA
                     RQMGKQKVVAETGAGQHGVATATVAALFNMECTIFMGEEDVKRQSLNVFRMELLGAKV
                     VSVKAGSRTLKDAVNEALRFWVANVEDTHYIMGSVLGPHPFPEIVRDYQSVIGIEARK
                     QHLEKEGKLPDAIVACVGGGSNAMGLFYPFVDDVSVQMHGVEAAGHGLETEFHAATIS
                     KGEIGILHGAMMDVLQDENGQILEAFSISAGLDYPGIGPEHSFFRDLGRAAYHSVTDD
                     EAVEAFQLLCRTEGIIPALESSHAISYAVKLASQMRPEESMVVCLSGRGDKDVNQLKE
                     RLEGQIND"
     gene            32862..33635
                     /locus_tag="U0290_000469"
     CDS             32862..33635
                     /locus_tag="U0290_000469"
                     /EC_number="4.2.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan synthase subunit alpha"
                     /protein_id="HEM2300520.1"
                     /translation="MTKTLTNKLAKKDHAAVVTYIMGGDGGLDNLEEQLLFLEKSGVS
                     AIEIGIPFSDPVADGPIIQLAGLRALKEQVSLEAILNKLARSKVQIPLIIMSYINPIF
                     HLGIPKFVELVQKTPVKGLIIPDLPYEHQTLITPELQGTDIALIPLVSLTSPKERLEE
                     IAKQAEGFIYAVTVNGTTGVRSEFDAHIDNHLAYLKSISPVPVLAGFGVSSIEHVEKF
                     AHVCDGVIIGSKVVQMLHEEKTAELGAFLQKAAEVRIEN"
     gene            33706..34143
                     /locus_tag="U0290_000470"
     CDS             33706..34143
                     /locus_tag="U0290_000470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300521.1"
                     /translation="MSVEVKPEHARMLNNTKNVTLGIAIVSTIQAVLSAVSIVGLFAL
                     QQRKEVLANAHATAVVQNTIMTTTIMAVICIAFTIMLFLSFNKLRKGIIITPLVYYLY
                     AAFTILGVILSMINSGVNFVSLILPAVLLALSVTCILNLRRMR"
BASE COUNT        11231 a         5777 c         7395 g         9943 t
ORIGIN      
        1 taggtgaaca tttagtgaag tatatgtcat aaaatgaata aaaaactaat aatcgctcta
       61 aaacgagtgg aaataggcct ttttaggcaa agttatttca gaaagagtaa gaataattct
      121 aaataagaat gctttttagt cattcacgac ataaaacaga catttcatta catttttggt
      181 tatacactct gttttcgtgt tacaattttt ttgttcgatg aaaggtaata aaaagcacag
      241 tctactacgg gaaaatgatg ggtgattgta tgttttaaag tgaggtgaat acaaaaaggg
      301 agtgagtttg taagataata gtttgtttta tgacaatatg tttgaggcta cactttatta
      361 attattacat acaaagaggg agagcggaga atgaaaaaaa ttatatcatt attagtagca
      421 tttgtatgtt tgtggagtat tttacttcca ggacatgaag cagatgcagc ggcaaaaatc
      481 aatagctggg acttagtaga ttctagtaaa cacctagatt actcggggaa ttcaaagtat
      541 atgtcattta ttcgatctgg cgctaatact tggaatgctt ataaaaaagg agttattaga
      601 ccagcttcag gagcgaataa atcagacgta tattgtagtg atatttcagc caataataat
      661 atcaatgcaa cgacttatag taacgggaaa attactttta acaagaaaaa tatggataaa
      721 aaaaataatg ctgggaaaca aaatgttgct acacatgagt tgggacacgg cttgcgactc
      781 gggcataatg cttctagtga cgtaatgtat cagtatagca cgtccaaaac tactttatct
      841 acaaatgata aacaatccta tgatgcagca tataaaaaat attaaaaagg ggtactaaca
      901 ttgaaaaaaa caactatggg aataatcgct tcagcaatta gtattttaac tatcgggtgt
      961 tttttaacaa taaacacata tgccgaaaaa gctgaaccaa agaagaaaga agtaccaaca
     1021 tatgccattt tttctgatta tacactggat gtagataatc cagatgaagt ggtcgaggat
     1081 gcagattatg tgtttgtagg gaaagtaaca gaagaaactg gaacaatcta taaaaataaa
     1141 acgccaatcg aacaagaaga tggttcaatc gagtatattg gtgaagctta tacaaattac
     1201 aaagtagaag tcatttcgaa tttgaagaat gaactaacgc tgaataagga aattgcactt
     1261 gaaaaacagg gtggtattcg tgaagatggt tctgcttatg atgtttttga agatgaccag
     1321 ttaccagaag aaggcgaaat ctatattttc actgcttata cgcaagacga tggatcactc
     1381 cttgtagcag gtgggaattc taccatttct ttcgatgaaa aaacgaaaaa cattgataca
     1441 gaaaaagaag tgagcaaaac ggaagagttt gaattatatg aagaggccgt tgaaaatcaa
     1501 gttacttcca acgaaaatta aataagccat tataaagcat agcgattctg gcatgaatcg
     1561 ttatgctttt ttatatagtc gaaggatttc gagaaaaagc ctaataaaaa taatttttaa
     1621 acaatttgca attatttgtt gcgctttcaa aaaaaatcgg ttaaactaat aacgttgcat
     1681 aataaaacaa aggaggaatg gacgatgaat aattatatga agacttcaaa caaggcatta
     1741 ttgcgcttaa aaatagaatt tatttcaccg gatcatttca cgaacaaggg aactctcctt
     1801 taatttggtt ttattttata caaagtggtg acaaataaat atattttttc gggtaataat
     1861 gggcagaaat aggtccatta tttttatttg tccaatttta aggagaaaag ggagggattg
     1921 ttgtttgaaa atttataaag cattgggttg gttttttaaa gaaaattgga aatcttatgc
     1981 atttggagta accattttgt ttacgattgc gcttttacag ttagttccgc cgcaaattat
     2041 tggctatacg gttgatgccg taacgaacga ctcactgaca aaagacaaat tgattaaatg
     2101 gatgattatt ctagttgtag cagcgattct tgcatacggt ggtcgctatg tttggcggat
     2161 gttaattttt ggttctgata ataaattaca acgcacttta cgtttacgat tatttgaaca
     2221 ttttaccaag atgtcgccat ttttctttca acgttatcgt actggggatt taatggccca
     2281 tgcgacgaat gatattacag ctattcaaca agttgcgggg attggcgttt tgaccctatc
     2341 agattctgtt ctaacagggg gaacggttat tgcgacaatg gcaataacga ttgattggcg
     2401 cctaaccttg attgcattac ttccaatgcc gtttatggta ctcggaagtt cgattttagg
     2461 taaaaagtta cacgaccgtt tccacggggc acaagctgct ttttcaatgt tgaatgataa
     2521 aacgcaagag agtatttctg gcattaaagt aacacggaca tttggacaag agaaagaaga
     2581 tattcaagat tttgcaaaac aaaccaaaga agtcgttcaa aaaaatattt ctgtcgctaa
     2641 agtggatgcg atgtttgatc cgatgatttc cattattgtg gggatttcat ttgttctttc
     2701 actaggattt ggcgcgaaat tcgttgtgga tggagagttg actattggac aagtgattgc
     2761 tttttcgaac tacttattct tattaatttg gccgatgtta gcatttggat ttttgtacaa
     2821 tattattcaa cgcgggaatg cttcttatga tcgtgtgcaa catttactcg ccgaaaaaga
     2881 agatgtactt gaccaggagg gcgcactaga tacggttcca gttggggact tacaagttgc
     2941 aatggacaaa tttacctatc ctgatgagag tgaaccagtc ttgtcagata ttcattttga
     3001 attaaaagct ggggaaacac tgggtattgt tggtcgaact ggttctggga aaacatcctt
     3061 attaaagctt ttaatgcgag aatatgatac gtatgaaggt aagattgctt ttgctaacgt
     3121 gaaaattcaa gactatacgg ttcgagcttt acgagaagca attggctatg tgccgcaaga
     3181 tcagttttta ttctccacaa cggtacgaga taatattcgt tttggaaaac cagatgcacc
     3241 gcaagaagaa gtgacgaaga ttgcaaagct tgtggctgta gatgaagata ttcttggttt
     3301 tgaaaatggc tatgatacga ttgtcggcga gcgcggggtt tcactctctg gtggtcagaa
     3361 gcagcgtctt gctatcgcac gagcgctaat tatgaatcct gaattgctta ttttagatga
     3421 tgcactttcg gcagtagatg cgaaaacaga agaacaaatt ttagctaatt taaaagagaa
     3481 tcgttcggat aaaacgacaa tcattagcgc acacagactt agctctgtcg aacatgcgaa
     3541 tctaattatc gtgattgata aagggcagat cgtggaacgt ggaacgcata aggaactaat
     3601 ggctttagat ggctggtatg cagaaatgtt ccacgagcaa caactggaag aagcactaga
     3661 agaagggggt gcagcagatg gaagcgatga atgaacaaga tgaaatgtta gtgatgtccg
     3721 gtaaagaaca tcgcgaggtt ttaaaaagaa tgcttagtta taccaaatat catattccga
     3781 gtttgatttg gacaggtgtg cttgttcttc tcgtaacgct tgcggatgtc tttgcaccaa
     3841 tcttgattaa gatatttttg gatgattatt taacaccgat gaatttggaa atgcaggctt
     3901 tgctaattct tggtgcggga tatttgggac ttacgattgg gaaatcagtt gtttggtatt
     3961 tccaactgct gttcttccaa aaaatcgcgc ttgaaattgt gcaacaaatg cggattgata
     4021 tttttacaaa acttcattcg ctaggtatgc gttattttga caaaacgcct gcaggaagca
     4081 ttgtgtcgcg cgtgacaaat gataccgaag cggtgaaaga tatgtttatt aatgtgcttt
     4141 caacagcgat ccaaagtttg tttatgcttg tagggattta tgcggcgatg tttgcgctca
     4201 atgttcaatt agcgttatat agtttgctgt tattcccact tattgtcttt attatttttg
     4261 tttaccggaa atacagttcg cagttttacc gggcgagacg agaaaaatta agtcaattaa
     4321 atgcaaaaat tgctgagtcg atttcaggaa tgtcgatagt tcaacaattt aatcaagagc
     4381 gtcgtttagt aaaagaattt gagaaaatca ataaagatta ctatgacgtc ggaatgaaaa
     4441 atatcaaatt taatgcgcta ttacttggac cggcgattga tttgatttac gcgttggctg
     4501 tagtgattat tcttagtttc tttggtgcag agtcattaat aggaccggta gcgattggta
     4561 caatttatgc ctttattagt tactttgatc gttttttaga agctatttat aatgtaatgg
     4621 aacggctagc aatgtatcaa gaggcgatta cggcggcttc ccgagtattt cgtattatgg
     4681 atgaaacaga agaagtgcca gcccaattga acgatccaga ggcaaaaatc acacgcgcta
     4741 aaattgagtt taaagatgtt tcgtttgctt atgaaggtgg gcgtgacgtt cttaaaaata
     4801 ttagctttac ggctgaacca ggacaaacgg tggcgcttgt tggccatact gggagcggga
     4861 aaagttccat tatcaattta atgatgcgtt tttatgaatt tgaacgtggc gatattttaa
     4921 ttgatggtaa gtcgattaag tctcacgaaa ttacagaact gcgtaagaaa actggactag
     4981 ttttgcaaga tagttttatg ttttatgggg atattaatac aaatattcgc ctctacgata
     5041 aaagcattac agatgaacaa attgtggatg ctgcgaaatt tgttcaagcg gatggcttta
     5101 ttcaaacatt atccgatgag tacaaccata aagtgattga gcgaggggct tcgttttcaa
     5161 gtgggcaaag acagctgatt tcatttgcca gaacggttgt gacgaatccg caaattctcg
     5221 ttttagacga agcgacagcg aatattgata ctgaaacaga aagcttaatt caaactgggt
     5281 taaaacgaat gagagaagga cgtacgacga ttgcgattgc gcatcgactt tcgacaatta
     5341 aggatgccga tttaatttta gttttatcta aaggacgaat tattgaacgt ggtacacatg
     5401 atacattaat tgcagaagaa ggagtgtacc attccatgta tcaattacaa aatagcggaa
     5461 tggatttaga cgaagcactt taagcagaga agtttatttc aaacggtaaa aggaatataa
     5521 tgaggagcga agtgttacag cagattagta gggggaatta aaagtgtcat taatcatttc
     5581 aattatcatt acacttgttt ttggagctgg aattatcatg ataagaatga aagcatcgaa
     5641 gcgtccagca agtgtgaaag ggattatcat accaccaatt atgatgtcaa caggcgctct
     5701 catgtttgtt attccttttt tccgtgtttc gtgggtagat attttagaag ctatagcaat
     5761 ggggcttgtg ttttctgtta ttttaatttg gacaacaaaa ttcgaaattc gtcataagta
     5821 cgtatttatt aaacgtacaa aagcttttcc agttattttg atgggactgt tactcattcg
     5881 aatcttcatc aagtactgga ttagtggtag tctggaagtg ggagagttgt ctggaatgtt
     5941 ctggataatg gcgtttgcga tgattgtacc ttggcgaatt gtgatgtatt tccaatataa
     6001 aaataccgaa aaagagctta ataaagtaga agttagtgga gagtacgaat aatagtgaaa
     6061 gcattttcta aaacagcttg aattattccg tatgaatagc ttataatgaa taatgttaca
     6121 tcgtgagtaa tgttacttgc cggatgggtg aagcatatcc gagactgacg cggccagtta
     6181 caaaagggct tccgagtttg gcttgaaaaa aaggaggaca tcatcttgaa aaaatggtta
     6241 ttagtagttt taactttagc actaggattg tcgcttgcgg cttgttccgg ttctaacagt
     6301 tctgacaaaa aagaagacac aaaaaaagaa acaacaagtg ataaagacaa agtactaaat
     6361 tattacatgg acttagtaga cgttgttaat gaaaacaatg gcgattacaa cgcttatgta
     6421 ggagcagttg gcgcagatcc taaaccatct gaagcagacc ttgcagctct tgcgaaacca
     6481 gctagtgaat cagcacttaa agtatctgaa gcacttgcta gtgaaaaaac accagacctt
     6541 ggtaaatcca cagatgattt caaagcagct gtgaaacaat taagtgatgc ttacaaatta
     6601 gaagcagacg cacttaaagc tagtggtcgt gatacaacaa aagcagacga agcgatggca
     6661 aaagcggacg aagcaattgc tggcgtatta aaagatgctg gacttaatcc ttcaagcatt
     6721 acaactgata cagcttcctg ataataaaaa agacagtttc ctaatggaag ctgtcttttt
     6781 tattatttat tttttgtttg attaatttca ttttgaagtt gttcaaaagt cgccattaat
     6841 tcttgagatt taacttctag tagctctttt tggtcaagtt cggtatcatt gaataatacc
     6901 ggatcgccaa aacgaataat gatttttttg cgttttaaaa tttctccaaa tgtttttggc
     6961 ccatcataaa cggcaggtag cattggaact tttgctttat gagcgatagt tactgcaccg
     7021 cgttttaaat gaaggttggt cgtttttcta gttccactcg ggaaaatccc aactacttta
     7081 ccggatttta acatccggat tggggcttta atggcgcttg gtccggggtt atcgcgattg
     7141 actggaaagg cgttaaggtg cgtcatgagc cagttaagga atttaccttt gaaaagctct
     7201 tgtttcgcca tataatgtac cggtgttggc gatagggcga aaccaaggta taagatttca
     7261 atccatgacg tatgcgtgga cacaacaacg tatggtgctt caatgatttt gtctttgttt
     7321 tgtacttgaa atcgtccacc aataataatt aaaataaaat gaacgaggtt ttttgcgaaa
     7381 tgataaaaca acttcttcac tcccagtatt gctagttatt tttttaaact atatctagta
     7441 tacttaaaat tgacgagttt tgcattaaaa ataaataatc tctgagaaaa agaaatgagg
     7501 taaccgatga aatttttaca tacagctgat ttgcatttag gaaaaattgt atctggcgta
     7561 tcgatgctag cagagcaaga atatattttg gcacaaataa cgaagattgc cgaggaagaa
     7621 caagtcgacg cacttatttt agcaggagat ttatatgacc gcgccgtgcc gcctgcggat
     7681 gcggtgaaag tgctaaatga tattttagtg aaatggaatg tagaactagg tattccgata
     7741 tttgccatta gcgggaatca tgacagtgcg gagcggcttg cttttggaag tcagtggtat
     7801 gaaagtagca agttgtatat gaaaggaaaa tgtacctcgc agtttgaagc gatttctttt
     7861 atggatgccg aagtgtggct tgtaccatat cacgaaccag caattattcg ggaagctttt
     7921 gcagataatt cgattcgcag ttttgaggac gctatgcaag ccgtgacgaa acaaattcgg
     7981 tccaaatggg atacaagcaa ggcgcagatt ttggttggac atgcgttcgt ttctggcggt
     8041 attccgagtg attccgaacg acaactagca attggaaatg tggaccgtgt ttctacggat
     8101 tgttttgatg gttttacata tactgcactc gggcacttgc accatccgca tgcgattcgg
     8161 cacccgtcta tcttttatag tggatctcct ttaaagtatt cattttcaga agcaaatgat
     8221 cacaaaagcg tgcggattgt ggaactggaa ggaaaagaac tggttagcgt gacggagcgc
     8281 tttctaacac caaaacatga tatgcgcatt atttctggaa cactagcgga actgacagaa
     8341 aacttagtag aaaatcctga tgactttttt caagtgaatt taatggatga aggtgcttta
     8401 attgatccga tggggaaatt acgccaattt tatccgaata ttttacattt agaacgtaaa
     8461 aaacaaacat taaaagaaac gcaagataac tttgaagaaa tcatgaaaaa agatgattta
     8521 gagctatttg gtcaattttt tgaacatgtt aatgggacag aattaacgga aacacaaaaa
     8581 caaaagttag cggatgtttt tgaacaagcg aggaaggagg atgcggaatg agaccgatta
     8641 aattaacgat gcaagctttt ggagcctatg ccaaaaaaga agtcattgat tttgaaaagc
     8701 ttggaacgga gcaaattttt gtgatttctg gtaaaacagg agctgggaaa tcgacaattt
     8761 ttgatgcgat tagttttgca atttttggga aagcgaacac atttgatagg gaaagttttt
     8821 cgatgcgaag tcattttgcg acggataaag aaataacgga agtaacgcta gcttttagat
     8881 tgaaggacaa gatttaccaa attagccgca ttcctcagca ggaaattgcc aaacaacgcg
     8941 gaaacggaac aaccacttcg ccgcaaaaag cagaattata tgagttgatt ggtgacgaaa
     9001 tgaagttgct tgcaagttcc gtgcgcgatg ttaatgcaaa aatggaagaa ttaattcaac
     9061 ttaatgtgga tcagtttaga caaattttga tgattcctca aggcgaattt agagaactgc
     9121 tcgtatcgga tagtaaagaa aaagaagtca tattgcaacg gttagcgcat actgcttact
     9181 atgaaaaagt ggaaaatttg ttatgggaaa agcagaagca agccgaaatc ttggttgtag
     9241 aagcgcgtaa aaaagtagcg gaacttgctg aacttagttt accggatggg gaagtttctg
     9301 gaaagacaac gagtgaaatc agcgtgttgc aaaacgaggc cattcaaaaa gaacaagcaa
     9361 ttttaacgga attagaaaat aaattaagta ttattcggaa acaaacaagt gaagctgttg
     9421 aaaaagtgac gcttgcgaaa gaacaactgc ttgattggca aaatttggat aagtatacag
     9481 aagaagttgc gacactagaa gcggagaaag atttttatca aacaatagaa gttcgcatgg
     9541 aggctgcgaa aagagcaagc aaccttcaat cccaagatgc actttgtatt cgtttaaaag
     9601 aacaattaga aacagccgaa caaacagaaa aacaagtagc acttgaggca gaacaggtaa
     9661 aagcccaatt ttcacatgcg aaaaaacaaa aagaagctct tgctgaaaaa gaagcagaat
     9721 tagaaataaa caaacgaaca cttttccaat tagaagaaat ggaaccgaaa atattggaat
     9781 tagaaacagt cttgatccaa aaaagacgcg ccgaattaga ctggaaaaaa acaacgaccc
     9841 ttttagaaaa aataatcgac aaggaacaaa aaatagccac agaactgcaa tcagttgagg
     9901 cgcgattagc ggaaataaac aaagccgagc tcatgtattt agaagttatt aacaaacgga
     9961 caacattaga agccaggata gagaaagaac aagaattggt taataaacgg ataaaaatgg
    10021 aggagtgggc cgcagccaaa caaactgaag aacaaacatt agcacaactt ttaatagaaa
    10081 aagcggaaat ggaaagaacg attaaacaag aagaaacaaa actagaaaaa gaacaaacgg
    10141 caacaatcgc agcgcatttg catgaaggag atgcttgtcc tgtctgtggt tcacagtcac
    10201 acccaatact cgcgaaattt ggagaaacag ctgaccttga aacactcgaa atagcaaaag
    10261 caaagctaca agaaaaacaa ttagtgatta ctacgacgga aaaagctatc agtcaactcg
    10321 aatggcaact taatgaatgg gcagatatga aagagcaaag tttagccgaa atacaacaaa
    10381 cattagctga aaatatccaa ctagctacta atctgagaga gcaaataacc cagttgcaat
    10441 ccgaagtagc tcaaaaagaa actgtccaag cgacattaga atcattgaaa aacagacaaa
    10501 atgaaacgct aaccgaaaaa aataagatgg ctctcgaagt agaaaagttg catcaacaag
    10561 tgcaactaac ggaagggaaa cgaacttatt tggaacaatc cattcccgac gagttgcgag
    10621 ataaggctgt tttcgataac aaaatgaaag aactaagctc aaaaatcgaa acacatatca
    10681 aacaagccga acagattgat gcgttgttta gacaggcaga aaaagaaaca accagactag
    10741 aatccacgtt acattcagcg caaaaaacaa cggtggatgc gaaagaagcc ttacaagtac
    10801 agcgcgaaat tttcaaagaa gccatgaaac aaaatgattt tttatcctat gatgcgtata
    10861 aacaagcttt gttatcagta gaagaactaa aaaacttaga agaaaaattg gccgaatacg
    10921 agcgaaaacg ccatttagct gtatcacgcc aagctgattt aaaagaaaaa ctccaaaaca
    10981 aacaaaaacc aaatatggaa caactagaat tcattatgaa agagaaacaa ctcgaactta
    11041 gccaatcaga agaaaataca atgaaacaac gcgaattcgt tgcaaaaaga aaagaacttg
    11101 tcgaaaacta ccaaaacagt attcaggcag tggaacaagc cgaagaaaat tatgcggata
    11161 ttggcttact agctgatgca gcgcgtggta aaaatgcccg gagattaacg tttgaacgat
    11221 atattttagc gatgttttta gacacgatta ttcaccgcgc caaccaccgt ttatccaaaa
    11281 tgacaagcgg tcgttttgaa ctacagcgga aaatggaaaa agcaaaagga aatgtccaaa
    11341 gtggcttaga acttgaagtt tttgatgagt atacaggatt aactcgacat gtaaaaacac
    11401 tttcgggagg agaaagcttc aaaacttctt tagcgcttgc attatcactc gcagaagtcg
    11461 ttcaagaaat ggcaggtggg atttcacttg aaacgatgtt tattgatgaa ggattcggta
    11521 cgcttgatcc tgaatcactt gaagccgctg tagaatgctt actggaaaca caagaaaatg
    11581 gccgcttagt tgggattatt tcccatgtac cagaactaaa agaacgaatt tccgcaaggc
    11641 tagaagtaac cgcaacaaat cacggaagta ccactaaatt tattactgca agtagctaaa
    11701 agaccgcatg cgttgccgtc cctcgtcttt tcctatataa tagtagttta gagtaatgga
    11761 cggttttggg aggaagaaag taatggagca ctttacagca attcaaaata aaatgatccc
    11821 atatagtgtg aagcaggctg gaaagaaact gatggaagac ggagaaatca ttcagtttcg
    11881 tgaaaaagat gcatcagacc atttttcaac gtattttatt gatcaaaatg tcgtagaaga
    11941 tgcaggtaat gaaaattatg cgtgtagttg tgccgatttt caattgaacg cgatttgcaa
    12001 acacatctac gcaacccatc tgaaaatgga aaaagaaaag caaaaagcag ccaaacaaga
    12061 ttttaaaaat cgaattctca cgcaagaatc aaatacactt ctttcccttt ttcaacaaaa
    12121 tatggcgcaa cagctcgaag tagaagagga caatacgaat aaaacgccac tccaaacgca
    12181 gtatatcatt cgtttaaaac ccgatgattc tagttatatc atgactattg aagtcaaagt
    12241 tggcacagaa cggacctatg ttgtaaaaaa tatgaataca tttttagccg caattcgcga
    12301 caggcagtgg cttgttttca ctaagaattt tgcttacgat ccaaacgagc atttctttct
    12361 tgaggaagac aaacaaattt tggataaact actgcaaatc agtgaaattg ccaaaatgta
    12421 tgatacagat tctttttatt ggtccaaatc ttacgcagaa gagaaaaacc taacgattcc
    12481 accgagtatg gcgagcgact tgttagaact actcacagaa cgcgatacga cgtgcattat
    12541 tatgaaagaa cgcgtagaag atattaaata tcgcggtatc aatgtgcgcc acgacaacct
    12601 tgatttcatt tttgaactca aaaaaagtgc agaagataaa taccaactag aaatggaaga
    12661 cttacaacaa gcaatctttt ttgaagccta ccaacttctt ttctttgacg gtaccttttt
    12721 cataccggca aaagaagtat gggaatcgtt gaaaccattg atggaatttc ataaagtaac
    12781 gaaaaatgaa gtggtgcaat tttcagagtc gcaattaagt gaagtcattt cctacgtatt
    12841 accagcctta cagaaaagcg ggaagttaaa gctggatgac tcgattgaag accggattac
    12901 gcaacagcca cttgattgta aattattcat tgcactcgaa tacggggagc atacgttgcg
    12961 acttgaatat cattatggca atcagctttt cgatccattt gcaacatcag aagaagaaaa
    13021 cgaaaaaatc atgatacgtg atgtcgaaaa agaagcccgt gtaatgaata ttatcgaaag
    13081 cgcccctgtt catttttctg gaacaaaaat ggtcgtcaat aaacaagaaa aggatttgta
    13141 tcaattttat tatcgcacca ttccaaaact agcagagtac gcagagattt atatggaaga
    13201 cggtctcgaa gaaatggtag aagagaatgt gcgcccagtt acgacactgg atgtttctgg
    13261 tgataacgat tatctttctg tttcgtttga tttcaaaggt attccggaag aagaagtgca
    13321 aaatgtccta gaatctttgc gtgaaaaacg tagctatcac cgtctgaaaa gtggccgttt
    13381 cttatcgctt gaatcagaaa actacaaaca aatggaagat gtactccaaa tgttagaagt
    13441 gcgtaagaaa gatgtccaag caaacatgca agtaccgctt tatcgtggga tgcaaattta
    13501 tgatatttta ggagcaggaa cacaagatga acatcataaa ttcagtcgtt ctttccgcga
    13561 attgcttaca gatattacga cgcaatccga agacagtttt gcgttaccaa aaggattaaa
    13621 agcagagttg cgcgattatc aactaactgg tttcgaatgg atgaaatcac ttgcgaagta
    13681 taatcttggt ggtattttag cagatgatat ggggcttggt aaaacggtgc aaacgattag
    13741 ttttctagca tctgagttag aagataaccc taacttaaaa ccagtcttaa ttattacgcc
    13801 agcatcacta ctttataact ggcaaagcga attagaaaaa tttgcgccaa ctattccagt
    13861 gaccgtttta catggaacga aacaatcccg gatagccgaa atggaagaaa tgaagcatgg
    13921 ccatgtctac ttgatttcgt atccatcgtt acgccaagat attgtccatt ttgcagatgt
    13981 cgctttttca agtgttatta ttgacgaatc acaagctatc aagaattatc atacgaaggc
    14041 ctctcaagct gtgcgcgctt tgaaacgcaa tcatgtattc gcgctcagtg gaacgccgct
    14101 tgaaaacagc atcgatgaac tatgggctat tttccaaaca ttaatgccag gatttttccc
    14161 ttcattgcgc aaatttaaag aaatacctta cgacaacatt gctaaaatga ttcgtccatt
    14221 cttactacgt cgactaaaac aagatgtcgt caaagaacta ccagataaaa ttgaaaccaa
    14281 cctttattct gaattaaccg atgagcaaaa aacaatatac ttagcttatt tagaaaaaat
    14341 tcaagctgat ttagaagcaa gcaatggtaa tgcttccgaa gaacgaatca aattactcgc
    14401 aggattaacc cgtttacgcc aaatttgctg tgatccgagc ctttttgtgg aaaattatca
    14461 aggtgaatct ggtaaattac tacagttatt tgatacaata caaacagcaa gagaaaacgg
    14521 taaacgcatt ctcctatttt cccaattcac gggtatgctt ggaattattc gccaaaaact
    14581 agaagaagat ggacaaacac ttttctacat ggatggtaaa actccatcga aaacaagact
    14641 agatatggtt aatgctttta acgaagggga gaatgatatt ttcttgattt ccttaaaagc
    14701 tggtggaacc gggctcaatc ttgttggcgc ggataccgtg attttatacg atttatggtg
    14761 gaatccggct gtagaagaac aagctaccgg acgtgcacat cgaatcgggc aaaaacgcgt
    14821 tgtccaagtg ttccggatga tcactaaagg aacgatagaa gaacgaattt ttgatttgca
    14881 aaagaaaaaa caagcgctag tggacgaact aatccaacca ggcgaacaaa tgctaggaaa
    14941 attaagcaca gaagaaataa aacaaatctt acaattggat aatggaaggg atgacaaata
    15001 atgaaaaagt gggaagtatt cgcagttcaa aatgtcgagg cagcagagga aattatcaac
    15061 aaactagtaa gcgagggata tgaaaaagaa gatatttctg ttctagctaa atcaaaacat
    15121 aacaaaaact tagaaacttt agcagaaaaa gaaaatatcg aaatcgaacg tcctgtaaat
    15181 gaagaggctt tcggtattat ttctggaatc ctccaatctc taagtggagc cattgttatt
    15241 ccacaagctt acaatcccaa atatggtgct ttgtatgctg ccggtccctt tgccaaatgg
    15301 ttctcgaaaa cagacgataa atcggtaaaa agattattag aagactttga tttaacagaa
    15361 aaacaagtag ataaaatgat tgaaaattta catgcagata acatcttaat ttttgcgaga
    15421 taatatcggt gaaaaaggag aagtttatgc aaattaagga atttttgatt agtcgtcgtt
    15481 cagaattagt gaatatgttt tatgaaaatt attatattga aacggatgaa tttaaattaa
    15541 gacttcgtgg cggggaagag gaagaagcta ttcgctcgct aagcactgca tcatgtggca
    15601 tgattattga tgtcattacc ggcgtgaaag aacgagattt tgaaagtatc ggtaaaagac
    15661 gcttcaatga taagacggat attagaaaaa ttcatcaaca tatgagtgaa gttgaaaaat
    15721 atatcattac tagcttagtg aagtggaagg aagcagaaaa tgttttctat acggatgctg
    15781 acattatcca atttatgctt gatataaaag atacgctttc atccattcaa caacaattgt
    15841 tagaaggatt tatgcaagaa aatagaaatc aagtagcagc tcagcgaaaa gaaatcattc
    15901 aattatccac gcgaattatt ccaataaatg attctattgg cgttttacca attgttggta
    15961 gtttagatga cgatagaggt tattttatga aagagaaagc agtagaatct gcggataagc
    16021 tgaatttaga tacgattgtc attgattttt ccagtgctgt attaaaagat gatttcgcaa
    16081 ccaaacatat ggaggatatg attcaatctt ttaaattaat tggcttagta ccaatacttt
    16141 ctggtatgcg cccaagtttc gctcaacgca caatccaagt tggttcaaat atttccaaac
    16201 tcgaatcatt tggctcttta gaacaagcat taaccaattt aggtgtttaa agtacagatg
    16261 aatggcactc gttgtcattc atttttttgc tataagaaaa agttatcgaa ttatagcgga
    16321 ttctctttgt ttacttatcg cccgttttta agtacaatag atgagagaga ccaatcgttt
    16381 caagaattga aggaggaaac gtggatgact aattggaaag aaaaagcaaa agcatcattt
    16441 caactaaacg acaaaacgta tcattattac aaacttaaaa ccttagaaga ggacaagctt
    16501 acaaacatcg agaaattacc ttattctgta cgtgttttac ttgaatccgt tttaagacaa
    16561 gcagatggca gagtaattaa ggactcacat gtagaagatt tagcccattg gtctaaagat
    16621 ggaaacgaag gcgaagtacc attcaaacca gcccgtgtta ttttacaaga tttcacaggt
    16681 gttcctgcag tggttgattt agcttcttta cgtaaagcca tggcagatct tggcggcgac
    16741 cctgaaaaaa tcaatccgga aatcccggtc gatttagtcg tcgatcactc ggtgcaagta
    16801 gacagctatg cgaatccaga agcactgaaa atcaatatgg aactcgaatt caagcgcaac
    16861 atggaacgtt accagttttt aaattgggcg caaaaagcat ttgataacta tcgcgcagta
    16921 ccacctgcaa caggtatcgt tcaccaagtt aacttagagt atttagcaaa cgtcgttatt
    16981 gcgaatgaag tagcagacgg cgaatttgta gcgtttccag attcccttgt cggaacagat
    17041 agccatacga cgatgattaa cggtattggt gtattaggtt ggggcgtggg cggtattgaa
    17101 gcagaagccg gcatgctcgg tcaaccatct tacttcccaa ttccagaagt tatcggtgtg
    17161 aaattgctag gtgctttacc aaacggcgca acagcaactg atttcgctct aaaagttacc
    17221 caagtcttac gggaacaaaa agtagtaggt aaatttgttg aattttatgg tccgggtgtt
    17281 gcgacacttc cgcttgctga ccgtgcaacc gttgcgaata tggctccaga atacggcgca
    17341 acttgtgggt tcttcccagt agataaagaa gcccttaatt atttaaaact aactggccgt
    17401 gacaaagaac aaatcgaatt agtagaagct tatttagaag caaacgattt attcttcaca
    17461 cctgaaaaag tagaaccaaa ctacacgcaa atcgtggaaa tcgatctttc cgcgattgaa
    17521 ccaaacttgg cggggccaaa acgtccccaa gatttgatcc ctctttcgaa aatgaaagaa
    17581 acattccggg aatcgattac tgccaaagca ggcaaccaag gtttcggact agataaatca
    17641 gccttagaca aagaagtaac cgttactttt ggtaatggcg atcaatccac tatgaaaact
    17701 ggttcggttg caatcgcggc gattacaagt tgtacgaaca cttctaaccc atatgttatg
    17761 ttaagcgctg gtttagttgc taaaaaagca gtcgaaaaag gcttagaagt accaaaattc
    17821 gtaaaaacat ccttggcgcc aggctctaaa gttgtaacag gttacttgga aaaagccggc
    17881 ttacttccat atttagaaaa acttgggttt gaccttgttg gctatggttg tacgacgtgt
    17941 atcggtaatt ctggtccgtt aaaagaagaa attgaagaag caatacaaga cagtgatttg
    18001 cttgtttctg cggtattaag tggtaaccgt aactttgaag ggcgtattca tgcacttgtg
    18061 aaagcaaact tcctagcttc accaccacta gtcgttgcct atgcgctcgc tgggacaaca
    18121 aatgtcgaca tgctaacaga accaattgga cgcggtaata atggcgaaga agtcttctta
    18181 gacgatattt ggccaagttc agaagaagtg aaggcattag tagaagaaac ggtaacacca
    18241 gaacttttcc gtgaacaata tgctcatgta tttgatgaaa acgaagcttg gaatgcgatt
    18301 gaaacaacag aagatgccct atacaaatgg gatgaaaact ctacgtatat tgcgaaccca
    18361 ccattctttg ataatttagc gaaagaagct ggcaaagtag aaagcttatc tggtctccgc
    18421 gttattggta aatttggtga ttcagttaca actgaccata tttcgccagc cggagcaatc
    18481 ggcaaagata ccccagctgg aaaattcctt caagaagaag gcgtggcaat tcgtgatttc
    18541 aactcatacg gttctcgtcg tggtcatcat gatgtgatga tgcgcgggac atttgcgaat
    18601 attcgtatta aaaatcaaat cgcaccaggt acagaaggtg gctatacgac ttactggcca
    18661 actggcgaag tgatgtcaat ttatgatgct tctagaaaat atatcgaaaa taatactggt
    18721 ttagtcattc ttgctggtga cgattatgga atgggatcct ctcgtgactg ggctgccaaa
    18781 ggaacgaact tgctaggaat taaaacagtt atcgcgaaaa gctatgaacg gattcatcgt
    18841 tctaaccttg ttatgatggg tgttttacca cttcagttcc aaccaggtga agacgcagaa
    18901 acgcttggtt taacaggttc agaaagcttg caagtggaaa tcggtgaaga ggtagcgcca
    18961 agagaccttg taaaagtaac cgctgttcgt gaagacggct caagcttcac ttttgaagca
    19021 cttgcacgtt ttgactctga agtagaaatt gactattacc gtcacggcgg aattttacca
    19081 atggttcttc gtggcaaatt gaaataactt taaaaagagg cgagcaataa agttcgtctc
    19141 ttttttattt ttgcttgcaa aaatagaacg tatgttttat tattggttaa taggaggctt
    19201 gagcgaatga ggtatcagaa aatcagtttt atagtgactg gaataattgc agcagtaata
    19261 gggtatctta tttttacgag caactatcac cccgatgttc caaactggct actcttttta
    19321 tttttagcat taagcattgc tgtggcagtt agtcagtgga aagagaaacg actaatttgg
    19381 agttgcgtcg gactatttgt ggctgttttg atcagtgtgt attacatttt aactatatag
    19441 gaggaactcg ctttgtctga agaattacgt tgcccttggt cgattaatga cccgtttgaa
    19501 ctagaatatc atgatacaga atggtgtgtt ccgagtaaag acgacacata tttatttgaa
    19561 atgctcaatt tagagggagc acaagctgga ctctcatgga gattaatttt acataaaaga
    19621 aaagcctatc aagaagcttt ttttcacttt gatattgata aatgtgcacg cctaacagac
    19681 gatgagctgg cgacgattgt cgaagaagcg gctattgtaa agaatcgcct taaagtgaaa
    19741 gcagttcgta caaatgccct agctacgcaa aaagtccaag ctgaattcgg ctcatttgca
    19801 aactatattt ggggttttac gaataatgac cgtattatta atgaatggca aggcatggga
    19861 gaggtccctg caagcacaga actatcagaa aaaatcagta aagatttaaa gaaacgtggt
    19921 tttaagtttg ttggccctgt aattgtgtat tcttatttac aagctattgg gattttggat
    19981 gaccatttac gttcatgccc atttcataca tttaataggg aggcgacgaa atgattccag
    20041 cgaaattaaa acaaggggat gaaattcgga ttattgcacc aagtcgttct atcggtatta
    20101 tggctgacaa tcaagtggaa attgccgtta agcgcctaac ggacatgggt tttaaagtga
    20161 cttttggcga acatgtagca gaaatggatt gcatgatgag ttcaagcatt cgttcgcgag
    20221 ttgctgatat ccatgaagcc tttaatgatt cgagtgtcaa agcgattttg acggttattg
    20281 gtggttttaa tagcaatcaa ttgttgccat atttggatta tgagttaatt tcggaaaatc
    20341 ctaaaatttt atgtggtttc tccgatatca cggcattagc aaccgctatt tatacgcaaa
    20401 cggaacttat cacttattca ggcgctcatt tttcaagttt ttcaatggag aaagggctgg
    20461 actacgtaat ggactcattt agcaagtgtt tattgcaaaa agagccgttt gcgcttaaag
    20521 aaagtgctgc atggagtgac gatgaatggt atttggacca agagaacaga aattttattc
    20581 cgaatgaggg attagttgtt atgcaacctg gagaggcaga aggaatcatc attggcggga
    20641 acttatgtac gcttaattta ctccaaggaa ccgagtacat gcctaactta gcaggtacca
    20701 ttttatttat tgaagatgat tttatgactg ttccagaaac attcgaccgg gatttagaat
    20761 cgctattaag tcaacccggt gcaggtgaga tagaagggct ggtaatcggt cgtttccaac
    20821 agaagacagc gatgacagcg gagaaattag catatattat tgaaacaaaa acggcattac
    20881 aaaaaatccc agttatatct ggtgcggatt ttggtcatac acagccaatt gcgacattcc
    20941 cgattggcgg aactgcaaga attgatacaa atcagaccga taaaattcaa attattaggc
    21001 attaaaaaaa ggctgtccaa tgcggacagc ctttttaata tttaacttaa agcgacatct
    21061 cgttttttga ataagaagaa agtgaagaaa aggataatcg ctgtataaac acctagaccg
    21121 gcgattattt gccaatctgc taggccacca gcgattttag aaccgccaac tgtgtcattt
    21181 aggctgagca agttgaagat aatccatttc atccaatcgt atttttcgat agcgagaggt
    21241 agtaattggc gaataattcc accggagaat agtacaccaa cgccgacacc aactgcaagt
    21301 gcttgtgaac gaacgacaga ggagaagaag aaagcaatag ttgcgtatac gatcatcagt
    21361 aagaagttcg taccaagtag catccacgca tgttcgaaag cagtcattgc acccgttgaa
    21421 ggggagagcg gcataaaaat agattgtttt ggtaaaataa atgaaaagat aaagctagct
    21481 acaagtaatg tgatagagct aataatgctg taaacgatac acattacgta tttggaaaat
    21541 agtatctgac ttctagaata aggacgtgtc agtaaaagtt tgattgtccc accagaaaac
    21601 tctgttgcaa cgatgatact tgctacaaca acaacaagca ttgtcgcaac ggctcctgag
    21661 ctacctaatg aagcgaagaa atctgcgctt gaaatacctg ctgaattact agcgggtttt
    21721 tcatctgcat cgacataagc ttggtaaaaa tcaatttgtt tttggatagt ttctttggct
    21781 tcttttgttg gagccgcttg ttcttgtgtt tttaagtaag caacagaatc agttaaagat
    21841 aacgtttcag atttatacgt aggattacca tctttatctg cggagttcca atattcttct
    21901 tcgctaaccg gggcaccttt atcgtcatag taagcggtaa taccagcatt gcttgcgtcg
    21961 ccgccttcga taccactagt atctatttta ctaacaaaaa acataagaag agcaagagct
    22021 aaaactgcta caaataagac gatttgcata atccaacttg attttctgga aaataatttg
    22081 gtaaattcat tttttactaa tgctatcata cttctgcacc tccaccttta gttaattcga
    22141 ggaatcgttc ttcaagggag gcttgaagtg gaaccatttc taataaatca atatttgctt
    22201 ggataagcgc acgagcaatt agatgtacat cttcgtgagc cacttcgatt ttgaatagat
    22261 cctcattttg agcaacaagc ttgactggga gtgtagcgag aacggtttta gttgcttcgg
    22321 gatcgctaac ttttagttta taagcagcga catgattttc aattaggtcg ctcatttttt
    22381 cgatgtgcgt tagaacacct ttgttaataa tcgcaaatcg atccgtaatt tgttggattt
    22441 cgctaagtaa atggctagaa attaaaacag aagtaccatt tgtcgctaaa tcgcgaatca
    22501 gcgttctgaa ttcggccata ccttgtggat caagtccgtt tgttggttca tctaagataa
    22561 gtaaagcagg gctatgaatt aaagcttgcg caacacctaa acgttgacgc ataccgagag
    22621 aatatgtttt tactttctga ttaattgcgc cagtaagctt tacaagttca acgatttcac
    22681 gaacgtgttc gtcagtaatg tttttttgac tcatacgtgc gaattgcttt aagtttgccc
    22741 atccagacat atacatataa aattctggat tttcaataat agcacctact tctgaaatcg
    22801 ctgctttata ttctgtgtcg acatttttac cattaataaa aacggtacct tctgagcgac
    22861 gaattaaacc aacgatagag cggattatag ttgtcttacc agcaccgttt gggccaagta
    22921 aaccaaatac ttctccttta tgtatgtcaa agctgatatc gtggacaata tttttttgtc
    22981 cgattttttt cgtgacatgt tctaatttta aaactgtctc agtcatgaac tcactccttt
    23041 ttttctctca ctactaaaat tgtactattt tttagttcta attacattcg gctagaggac
    23101 gggaaaaaat catactttag tagtagactc attttctaag ttaaggtgcc aatctatgct
    23161 gtaatgatcg attactttcg cgtattttgc gtcccaaaat gtattttgaa tcggaatttc
    23221 gatggtgccg gttttggata gtaggacaaa ggcatgtaca aaatctgctt ccgaactaaa
    23281 attcaccgca agtgctaggc gattgcccgc gtctgtttcg ccttcgagcg tgtcggagaa
    23341 ataaaataaa tctttctcgt ctttcgtaag tcttgcatgg aggattcgtt ctccttgttt
    23401 tttatctcct gagaatcctt ccagctcgtg aaaataacgc atttgcgtaa tttctgcttg
    23461 aaacactttt ttataaaaat ctagtgcttc tgtggcctcc ccgtcaaaag taaagtaggg
    23521 aaccgttgct tgtatcatta aatcaactcc attcttgttc cattatacta attttagtac
    23581 taaagcgaaa gcgcaagccc tgggatggac ttgcgctttc ttctaacttt atatattaat
    23641 ggtggacaag ttagctagtt tcaaacacct ttgtaagctt ctaggtagat ttcttttagt
    23701 tcacttacaa gtggttgttt agggttggca gtagtacatt ggtccatgaa tgcgcgatct
    23761 gcaagtgtat ctacaactgc atccaaatct tttttagcaa cattttgtcc tttaagactc
    23821 atgtcgatac caacgtcttt accaagtttg atgatttcat ctacaagtga tttaacgcct
    23881 tcttctgtag ttgctgcagg gaagccgata atacgagaga tacgagcata atcttcatca
    23941 gcacggaagc tttcatatct agggaataac gcatgttttt taggtttaag tgcgttataa
    24001 cgaataacat gtggcataag gattgcattc gcacgaccgt gaggaatgtg gaattcaggt
    24061 ccaattttgt gtgccaagct gtggttaatt cctaggaacg catttgcaaa cgccatacca
    24121 gctagggcag aagcattatg cattttttca cgcgcatctg gatcaccagt aagaacagat
    24181 tcacgtaagt tttcaaatac aagttcgatt gcgcggatag ataatccacg agtataatcg
    24241 cttgccatta cggatacata agattcaatt gcgtgagtta gaacgtccat accagtgtca
    24301 gcagtaatgt gtgctggaac agtagttaca tattgtgcat cgacaatcgc aacatctgga
    24361 gttaattcgt agtctgcaag agggtattta atgttgtttt ctttgtctgt aataaccgca
    24421 aatggagtta cttcagaacc tgtaccactt gttgttggaa ttgcaacgaa tttcgctttt
    24481 ccaccaagtt taggatattt gaatgtacgt ttacggatat ctaagaattt ttgtttcaag
    24541 ccgaagaatg aagcttctgg gtgttcatag aataaccaca tacctttggc agcatccatt
    24601 gcagaaccac caccaagagc gataattgta tcaggtttga agtctttcat tagttctgca
    24661 cctttgtaaa ctgttacgtc agatggatct ggttcaacgt cagcaaatac ttggtaagct
    24721 acatcgttgc cacgtttttt caggtgttcg attacgacat ccacgtattt gaattgaacc
    24781 attcctgggt cagttacgat aaatacgcgt tcaacgcctt ccattttttg aaggtattga
    24841 gtggaatatt tttcaaagaa aatttttggt ggaagtttga accattgcat attatttctc
    24901 cgatccgcga tacgtttaac gttcagcaag ttagtcgcac ttacattttg tgatacagag
    24961 tttttaccgt aagatccaca acctagtgtt agggaaggga tgaagccgtt ataaatgtca
    25021 ccgataccgc cttgtgcgct tggtgcattt acgatgatac ggcaagcttt catacgaata
    25081 ccaaatgctt tttgaacttc tttatccgta gagtgaataa ctgcggagtg tccaagtcct
    25141 ccgtatacta acatttcttc acaacgatcg aatgcttctg cttggttagc agcttcgatg
    25201 aatgcaagaa ctgggcttaa tttttcgtga gatagtgggt atttgtcgcc aacaccttta
    25261 atttcagcta caaggatttt tgtatcttct ggaactttga agccagcttg atttgcaatc
    25321 catgcagggg atttaccaac tacatctggg ttaagtgttc ctttttcagg attgattacg
    25381 tagctttcta attttttgaa ttcagcgcct ttaacgaagt agcatttgtt tgcttccatt
    25441 tctgctttta cttctttagc tacttctttg tccacgatga ctgcttgttc agaagcacaa
    25501 atcatacctt ggtcaaaaga tttagaaaga ataatgtcat taacagaacg tttaattttg
    25561 gctgttttgt caatgtaagc tggtacgtta cctggtccaa cacctagtgc aggtttacca
    25621 gtagagtatg ctgatttaac cattccagca ccaccagttg caagtacaag tgctacttta
    25681 tcgtgattca ttaattgttt cgttgcttct agggaaggtt tttctaccca ttgaatacaa
    25741 tgttctggtg ctccagctgc aattgctgca tcgtatacaa ctttcgctgc tgcagatgaa
    25801 caacgctgtg cacttggatg gaaagcaaag atgattgggt tacgtgtttt gatagcgata
    25861 attgctttga aaagagtagt ggatgttggg ttagttacag gtgtaacccc ggcaacaact
    25921 ccaactggtt cagcaatttc aatcacacca gtttgtacat cttcattaat aacgcctact
    25981 gttttgttgt ttttaatgtt gttccaaata tattctgtcg cgaagatgtt tttaatacat
    26041 ttatcttcgt ataatccacg tccagtttct tctactgcta attttgcaag gggcatatgt
    26101 tggtcaagtc cggcaagtgc cattgcgtga acgatattgt ctacttgttc ttgattgtaa
    26161 ctttcaaatg ctttcaatgc tttttgtcca ttgtctgcta atctgtcaat cactttttga
    26221 acttctaata cttcttgggc cgcattttct ttaattgcca ttttccagaa cctcctaata
    26281 tttgttcggg acttaaaatg tccatagtag acttttaacg tccctgataa tccaaaaaaa
    26341 tttagcttgt tgctttgccg tattcttttg ttttatttga ttacaccgtt agtataatcc
    26401 atcaataaaa gtttgtccag tgtttcacgt gaaaaacttc acaaattgac aaagatggtt
    26461 gaaaagtcct ttcggaaaag ctttttttag ttaattaggc atggtttata tgagtgtttt
    26521 tatcattgga atttaagctg attatcattt gaaaacctat attttataag tgttttaagg
    26581 gaggtgatat ttattataat agagaaaata gcatactttt tctggggtga aatatattat
    26641 agggagatag ttcttttttc ttacttgttt attaattatc gttttggaac ctttttagta
    26701 taaagtagtt ttattttctt gactttcgtg attttcttat gtaagatgaa aacaagtaaa
    26761 aaatgatagc attgaagaag agtaagtagc atgatgaaag tttctagaga gctgacggtt
    26821 ggtgaaagtc agtagcagac atgatgtgaa tggacttctg agctctgatc tgaaaggatt
    26881 ttcttagtag gatacagcga ttaggcctta tcgttacaca aggcacccat tcggaatttg
    26941 gatggattaa gtgaactgtt tttacagtta atcaaggtgg taccacgggt ctctcgtcct
    27001 tgtctagtat atttgctagg cttggagaga ggcccttttt taattttata aaacgaaaac
    27061 atgaaacaag aatagtactt tttcatcgat ttttaaagag agttagcgtt tggtgggagc
    27121 taataaatag atgaattagg aatgggcctt gtgcgtgata ccttgaaatt aagtaggggt
    27181 gaacgggtgc tcccgttata gagcgactgc aaatattgca gtactgagat agggagaatt
    27241 ccctaaaatg aggtggcacc gcgataactc gtcctctgaa aaagcataat tttgcgcttt
    27301 ttcagaggac tttttttatt ttagtagaga agaagggatg attaagatga gaaaaacgaa
    27361 aaaaatagat gctgacacac taacggctat tctggcgttt caaagacttt caggtacagg
    27421 aaaaagtttg ctagaggggg cggcgaaaga tgcggaggct ggacgttatt cgattattgc
    27481 cattaatcca gtccatgaaa ttaaagtata tcaacatgat tattatatcg acggtataca
    27541 tcaagttgtc gcagatcctt taaaagaaat tgaattattt atcgaaaaag caaaagaaga
    27601 tgaagcagat ttaccgcttg attcaggtgc aattggttat gttggttatg atgtcattgc
    27661 gctttatgag aatttaggcg aaattccagt agaaactcgg gatatgccag atattcgttt
    27721 ttatgtatat gaaagttttg tgattatgga tcatcaggcg gaagaactta ttttagtgca
    27781 agataattgc tattcgggaa gaagtgaggc ggaactagat aaggcgcttg aattaatgtt
    27841 tactgaactt acaacgccga aaaaggaaga gcacaaggct gtccatgttc ccaaaatgac
    27901 atacaagagt aactacacga aagaggagta catggggtta gtgaaaaaag caaaaaccta
    27961 tatccaagag ggtgacttct ttcaaattgt tctctcgcaa cgactagaag cagatttcac
    28021 cgtgacacca tttgattatt atcggaaatt acgtttatta aatccttctc cttatcttta
    28081 tttcattgat tttggggata cggtgttgat tggatcttcc ccagaaagtt tgatcaaaac
    28141 aaaagggcgg acggtaatta cgaatcctat tgcaggaaca agacggcgcg gggcaacgaa
    28201 acaagaagac gaactactcg cttcggaatt gttgtcggat gaaaaagaat tagcagagca
    28261 ccgaatgtta gtagatcttg gacgaaatga tattgggaaa atcgccgaaa cgggatcagt
    28321 gcatgtgcct gtttacctta ctattgaaag ataccgtttc ttaatgcatt tagtttcagt
    28381 agtagaagga accttaaaac ccggacttac tgcaatggat gctcttcggt cgacgcttcc
    28441 ggctggtaca gttagcggag caccgaaaat aagagccatg gagcgaatct atgaatggga
    28501 aaatgtaaaa cgtggcccat atgctggtgc ggttggttat ttaactaaaa atggtgattc
    28561 ggatttcgcg ctttcgatta gaacaatggt acttcataac ggaaaagctt atgttcaagc
    28621 tggtgcagga attgtctatg attccgatcc agaaagcgaa tacttagaaa cattacaaaa
    28681 agcaaaggca cttttggagg tgggagaatg attctattaa ttgataatta cgattctttt
    28741 acatttaatt tagaacagta tttagcagaa tttagtgaag tggttgtgaa acggaatgat
    28801 gcgactgatt taatggaaat ggcggcttta gctgatggga tagttctttc accgggacca
    28861 ggaaaaccaa gtgatgctgg tcttttagaa gaagtagttg caaaatttgc gaaagaaaag
    28921 cctttgcttg gaatttgttt aggtcatcag gcgattggtg aggtattcgg cggagacgta
    28981 aaaagagcgg cgaaaatccg ccacgggaaa gtttctacta tgcggcaaac cgctggagca
    29041 atctttgcta atttaccgga agaaatgcct gtgatgcgtt atcactcttt aatagtagat
    29101 aaaaacacgt tgccacaagt tttggaagtg ttagcagtag cgacggacga tgcggaagtg
    29161 atggcaatga aagtaaaaga ttatccggtt tacggtttgc aatttcatcc tgaatcaatt
    29221 ggtacgaatg atggaaaaca aatgatggaa aactttattc atatagtgga aggagcgcga
    29281 gaaaatggaa atcttactac aaaaagtata tgaccaagaa aatttatcca aagaagaaat
    29341 gacaatgatc gcaacagaaa tttttgaagg acgactttcg aaaacgaaaa tagctgcttt
    29401 tttaatggcg ctcaaagtga aaggagaaac ggcagaagaa atggcgggaa tcgcgcaggc
    29461 gatgcaacga gtggctattc aagtcgcttt tccagccggg acagcgatgg ataattgcgg
    29521 aacaggtgga gataaatcca atagttttaa tattagtact acgtcggctt ttgttcttgc
    29581 ggctgcgggg attccggttg cgaaacatgg gaatagaagt atttctagtc gttcaggtag
    29641 tgctgatgtt tgtcaggaat tagggattga tattaatatg cgaccagaag atatgactta
    29701 tttactcgaa aaagtcggaa ttgccttttt gttcgcgcca catgttcacc cgaatatgaa
    29761 gtacgttatg gatgttcgaa aagaacttgg aacgccaacg atatttaatt tgattggccc
    29821 actcacaaat ccggtccatt tagaaacgca attaatggga atttatcgtc gtgatttgtt
    29881 agagcaaaca gcggaagtac tcggccagct cggacgaaaa cgcgcagttg ttttaaatgg
    29941 cgctggtttt atggatgaag cttctctggc tggagaaaat cattatgcgt tatatgaaaa
    30001 tggtgaagtt cacttatata cactgcgtcc ggaagatgtt ggtttaacta gctatcctct
    30061 cgaagcaatt acaggcggag aagctaaaga aaatgcagca attttgcgta gtgtgcttga
    30121 cggagaacca ggagcttact tagatacagt gcttttaaat gccggatttg gtttatttgc
    30181 aaatggcaaa gtgacaacgg tacaagaagg cgtggattta gcaagagatt taattagaag
    30241 tggtttagcc aaacaaaaat tggcagattt aattacttat caaaaagagg tgctagcaaa
    30301 atgacatttt tagaagaaat tttagcgcaa aaagcagtag aagttgcaga catgccctta
    30361 gaaaaagtag ccgaaaaacg gaaaacttat tcgttttatg aatttttaaa agcaaatacc
    30421 agcacgatgc aacttattgc agaagtaaaa cgcgcctctc cttctaaagg ggaaatcaat
    30481 ataggcgtga atccggttct gcaagccaag tcttatcaag ctgcgggtgc gggaatgatt
    30541 tctgttttga cagatcctgt ttttttcaaa ggctcgattg aagatttgcg agaagtagcg
    30601 aaaaatgtcg aaattcctgt actttgtaaa gattttatta ttagtgaaaa acaattgatt
    30661 cgtgctcgaa atgcgggagc aacggttgta ttgctaatta tttcggcact tacagaagag
    30721 atgctaattg ctctgtttga acaagctctg gcgcttgatt tggaagtgtt agtggaagta
    30781 catgaccaga aagaattagc tgttgctcaa aaaattggag ctaaactcat tggtgtgaac
    30841 aaccgtaatt tgcatacatt tgaagtggat attgcagtaa gtgaaagact ggcgagcgat
    30901 ttttcgtcgg atgcttgttt cataagtgaa tcaggttttc gaacagctga agatgtggct
    30961 cgtgttagtc aaaaatataa tgcagtgctt gttggagaag cgctaatgcg agaagcgact
    31021 ccagaagcag cggcgaaaag tttgaaggtg acacgatgat tgtaaaaatt tgtggattga
    31081 aaaaagcagt agatgtagcg gctgcggtcg ataatggcgc agatatgatt ggcttcgttt
    31141 tcgcaaaaag taaacgtcaa gttacggtgg aaaaggcaca tgaattagcc aaaaatattc
    31201 ccgctgacgt caaaaaagtc ggggtattcg ttaatcctac tgaagaagag ttaacggcag
    31261 caatcaaagg tgtgccatta gacattgttc aacttcacgg acaagaaccc gcaaaacaag
    31321 caaatcgcac agatgcaaaa gtaatcaaag cttttcctgt gaaagacggg aaacttccta
    31381 ccaatataaa tgactatcca aacgcttata ttttactcga tgcaccagca gaggaatatg
    31441 aaggcggcag cggaaaaaca tttgattggg ataaaataaa tagagacatg cttacaaaaa
    31501 acaaattaat tatagctggc ggattaaatg ctcagaatgt acaagaagcc attaaacgct
    31561 ttgaaccata tgcagtagat atttcctctg gcgtagaaac aaacggagaa aaagatccgg
    31621 agaaaattaa atgcttcatt aaaacagcaa aaggagtgga ataataatga cttatcaagc
    31681 acctgacgaa aatggctttt acggaaaatt tggcggcaga tttgtaccag aaacattaat
    31741 gaaagcagtg aaagaattag acgaggcgta ccgggcttcc aaaacagatc ctgcttttca
    31801 aaaagaatta aactattatt taaaagaata tgtgggccga gaaacaccac tttattttgc
    31861 tgaacaatta acagcacatg cgggcggagc aaaaatttat ttaaaacgcg aagatttaaa
    31921 tcatactggc gcacataaaa tcaataatac tattgggcaa gccttactcg cacgtcaaat
    31981 gggtaaacaa aaagtagtgg cagaaactgg cgcaggacaa cacggggtgg cgactgcaac
    32041 tgttgcagca ctttttaata tggaatgtac tatttttatg ggagaagaag atgtgaaacg
    32101 ccaatcactc aatgtgttta gaatggaact tcttggtgca aaagtagtga gcgtgaaagc
    32161 aggaagcaga acattaaaag acgcagtaaa tgaggcgctc agattctggg ttgctaatgt
    32221 ggaagacacg cattacatta tgggatccgt tcttggaccg catccatttc cagaaattgt
    32281 tcgtgattac caaagtgtga taggaataga agcacgcaaa caacacttgg aaaaagaagg
    32341 taagcttcct gatgcaattg ttgcttgtgt tggaggcggg agtaatgcga tggggttatt
    32401 ttatccattt gtagatgatg tttctgttca aatgcacggt gtggaagcag cgggacacgg
    32461 tttagaaact gaattccatg cagcgactat ttccaaagga gaaataggga ttttacacgg
    32521 agcgatgatg gacgttttac aagatgagaa tggacaaatt ttggaagcat tttcgatttc
    32581 agctggctta gattatccag gtattggtcc ggagcatagc tttttccgtg atttaggtcg
    32641 tgcagcgtac cattctgtta ccgatgatga agccgttgaa gcatttcaac ttttatgtcg
    32701 tacggaagga atcattcctg cactcgaaag ctcgcacgcg attagttatg cagtcaaact
    32761 tgcaagccaa atgcgtccag aagaaagtat ggtcgtttgt ttatctggtc gcggagataa
    32821 agatgttaat caactaaagg aacgcttgga gggacaaata aatgactaaa acattaacga
    32881 ataaactagc gaaaaaagat catgctgccg tagttactta cattatgggt ggcgatggtg
    32941 gcttagataa tttagaagaa cagttattgt ttctcgaaaa atctggtgta agcgcgattg
    33001 aaattggtat tcctttttct gatccggttg ccgacggtcc gattattcaa cttgctgggt
    33061 tacgtgcttt aaaggagcaa gtgagtttag aagccatttt aaataaattg gctaggagta
    33121 aagtgcaaat tccgctaatt attatgagtt atattaatcc gatttttcat ttaggtatcc
    33181 cgaaatttgt tgaattggtg cagaaaacgc cggtgaaagg gcttattatt cctgatttac
    33241 cttatgagca ccaaacactg attacgccag aacttcaagg gacagatatc gcacttattc
    33301 cgcttgtttc attgacaagt ccgaaagagc gcctcgaaga aattgcgaaa caggcagaag
    33361 ggtttattta tgcagtaaca gttaacggaa ctaccggtgt gaggagtgaa tttgatgccc
    33421 atattgataa ccatttagct tatttaaaaa gcattagccc tgttccagtt ctcgcaggtt
    33481 ttggtgtttc ttctattgaa catgtggaaa aatttgcgca tgtatgtgat ggtgtaataa
    33541 tcggtagtaa agtcgtgcaa atgttacatg aagaaaaaac ggcagagcta ggagcgtttt
    33601 tacaaaaggc cgcagaagtt cgaatcgaaa actaattact acttacaatt tctctttaaa
    33661 tatggtaaag tctggtgtat agaatgttaa agaggagttg taaggatgtc tgttgaagtt
    33721 aaaccagagc atgcgagaat gctcaataac acgaaaaatg tcacacttgg aatagcgatt
    33781 gtatcgacta ttcaagcagt attaagtgca gtctctattg taggtctttt tgcgttacaa
    33841 caaagaaaag aagtacttgc taatgcacat gccactgcgg tcgttcaaaa tacgattatg
    33901 acgactacca ttatggcagt tatttgtatt gcgtttacga ttatgttatt tctttctttt
    33961 aacaaactta gaaaaggtat tataattacg ccgcttgtat attatttata cgctgcattt
    34021 actattcttg gtgttatttt gtcaatgatt aatagtggtg tgaactttgt ttcgcttatt
    34081 ttaccagcag tactacttgc tttaagtgta acttgtattt taaatcttag aagaatgcga
    34141 taaaagtagt agtgtaagaa tgatttttac ataacccgat ttaacagaca gacttaaaag
    34201 aaaaaatcaa tcgaggtaac agaaattatg agttcaaaat taatgcgagg aacggctgtg
    34261 cttaccgctg gaacattgct ttcaaaaatc ttagggattt tatatgttat tccattttac
    34321 tggattgccg gcggggaaca agcaac
//
LOCUS       DASDYO010000010        34260 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.010, whole genome shotgun sequence.
ACCESSION   DASDYO010000010 DASDYO010000000
VERSION     DASDYO010000010.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 34260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 34260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..34260
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.010"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            73..2586
                     /gene="secA"
                     /locus_tag="U0290_000471"
     CDS             73..2586
                     /gene="secA"
                     /locus_tag="U0290_000471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecA"
                     /protein_id="HEM2300522.1"
                     /translation="MAGLLKKIFESGKKDVKYLERKADEIIALADETAALSDDALREK
                     TVEFKERVQKGETLDDLLVEAFAVAREGAKRALGLYPFKVQLMGGIVLHEGNIAEMKT
                     GEGKTLTATLPVYLNALSGEGVHVVTVNEYLAHRDAEEMGVLYNFLGLSVGLNLNALS
                     STEKREAYACDITYSTNNELGFDYLRDNMVVYKEEMVQRPLAFAVIDEVDSILVDEAR
                     TPLIISGEAEKSTILYVRANTFVRTLTEEEDYTVDIKTKSVQLTEDGMTKGENYFDVE
                     NLFDLENTVILHHIAQALKANYTMSLDVDYVVQDDEVLIVDQFTGRIMKGRRFSEGLH
                     QALEAKEGVTIQNESKTMATITFQNYFRMYKKLAGMTGTAKTEEEEFRDIYNMRVIEI
                     PTNKVIIRDDRPDLIYTTIEAKFNAVVEDIAERHAKGQPVLVGTVAIETSELISSKLK
                     RKGIKHDVLNAKQHEREADIIKHAGERGAVVIATNMAGRGTDIKLGEGTIEAGGLAVI
                     GTERHESRRIDNQLRGRSGRQGDPGVTQFYLSMEDELMRRFGSDNMKSMMERFGMAED
                     AIQSKMVSRAVESAQRRVEGNNFDSRKQVLQYDDVLRQQREVIYKQRYEVINAENSLR
                     EIIEQMIQRTVNFIVSSNASSHEPEEAWNLQGIIDYVDANLLPEGTITLEDLQNRTSE
                     DIQNLILDKIKAAYDEKETLLPPEEFNEFEKVVLLRVVDTKWVDHIDAMDHLRDGIHL
                     RAYGQIDPLREYQSEGFEMFEAMVSSIDEDVARYIMKAEIRQNLEREQVAKGEAINPA
                     EGKPEAKRQPIRKDQHIGRNDPCPCGSGKKYKNCHGKEA"
     gene            2671..3772
                     /gene="prfB"
                     /locus_tag="U0290_000472"
     CDS             join(2671..2742,2744..3772)
                     /gene="prfB"
                     /locus_tag="U0290_000472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010959056.1"
                     /ribosomal_slippage
                     /note="programmed frameshift; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 2"
                     /protein_id="HEM2300523.1"
                     /translation="MELAEIRNELEKTAQQIKDFRGSLDLDSMEVRIAELEDQMLDPN
                     FWNDQQAAQKVINESNGYKETYQAFHALEEEQESMEISLELLKEEADEDLQEELEKDI
                     KAYMATISEFELKLMLSDPYDKNNAILELHPGAGGTESQDWGSMLLRMYQRWSEKKGF
                     KVEMLDYQAGDEAGIKSVTLLIKGHNAYGYLKAEKGVHRLVRISPFDSSGRRHTSFVS
                     VDVMPELDDDIEIEVRTEDLKIDTYRATGAGGQHINTTDSAVRMTHIPSGIVVTCQSE
                     RSQLKNREQAMKMLKTKLYQKEQEEKERELAEIRGEQKEIGWGSQIRSYVFHPYSMVK
                     DHRTNYETGNIQAVMDGDLDEFINAYLRSRIG"
     gene            3778..4641
                     /locus_tag="U0290_000473"
     CDS             3778..4641
                     /locus_tag="U0290_000473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM2300524.1"
                     /translation="MANKRKKQPLSPVVSKLIEYIYVIIGAALIALAFNVLLLPNHVA
                     SGGVSGISTIINYLTGWNPAFIQWAFNIPLFLAGLFFLGYQFGLKTFVGTMLLPFFVY
                     LTQGLEPWTHEPLVAALFGGVLVGMGLGIVFRGKASTGGTDVAAQILHKYSHLTLGIC
                     VALIDGFVVISAMFVFDIESGLYALVGLFATSKTIDLVQVGLNQSKTVFIISENQEAI
                     RQAILFKIDRGITRLSAKGGYTEDDKQILLCVIAQSEFSRLKEVIKEIDPEAFVVVMS
                     ASEVMGEGFTS"
     gene            5148..5834
                     /gene="ftsE"
                     /locus_tag="U0290_000474"
     CDS             5148..5834
                     /gene="ftsE"
                     /locus_tag="U0290_000474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division ATP-binding protein FtsE"
                     /protein_id="HEM2300525.1"
                     /translation="MILMEDVYKKYPNGITAANGLNINIGEGEFVYVVGPSGAGKSTF
                     IKMIYREERATKGKIIVDKFDLINMKNREIPYLRRNVGVVFQDYKLLQSKTVYENIAY
                     AMEVVETEPSVIKERVMEVLDLVNLKHKVRMLPDELSGGEQQRISIARSIANMPKVLI
                     ADEPTGNLDPDTSWEIMNILEEISNRGTTIVMATHNKEIVNTLKHRVVAIENGRIVRD
                     EQQGEYGYEI"
     gene            5824..6708
                     /locus_tag="U0290_000475"
     CDS             5824..6708
                     /locus_tag="U0290_000475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2300526.1"
                     /translation="MKFRTVGRHIRESFKSLYRNGWMTFAAASAVTVTLILVSVFFAI
                     LINMNKLATDVENNVQINVHISLSADKKQQQELEKNIEKIDGVDSVSFSSKDDELKKL
                     VGAYGKNFELFKQDNPLYDVFVVEAKEPTQTKTIAKKVEKLQYVDNVEYGEKTVDKLF
                     DTLKWGRYAGIILSIGLLLTAMFLISNTIKIAIFSRRREIEIMKLVGATNWFIRWPFV
                     LEGAWLGLIGSIVPVVLTFIGYVNIYNLVNPKLVTSSLSLLPPTPFAYQISGLIIAIG
                     VLIGIWGSVISIRRFLKV"
     gene            6784..7989
                     /locus_tag="U0290_000476"
     CDS             6784..7989
                     /locus_tag="U0290_000476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEM2300527.1"
                     /translation="MKKNTFIAISLAAVISLTPAFTTNVFADVNTDIQNQDKKINDIK
                     SKKTDLQSDLSGLVADLEKAQEKAKSLQGEFDKTGKELKKLNEDIKSINERIKERETV
                     LKERARAMQKTSNSNAYLEVILDAENLSDLVGRVSAVNQLVDSDKSILEDQQNDEKAL
                     KTKQTAVKKKQEDQATAIHEYEAQQNKIEAQKAEKEAIVAQLASDQASAENAKAGLVS
                     ERDKAAKEATARATALREATSSNVGQESSSSATSTSSGKSNTTKNVASNDNNSAPSAA
                     TPSSGGYSAMIAAANAQLGKPYSLGATGPSAFDCSGFTSYAFRAAGVSLPRTSGGQYA
                     AASKISASQAKPGDLVFFNYGSGIAHVGIYVGGGQMINAQNNGVKYDNITSGYWAKYL
                     VGYGRVANF"
     gene            8109..9419
                     /locus_tag="U0290_000477"
     CDS             8109..9419
                     /locus_tag="U0290_000477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEM2300528.1"
                     /translation="MLKKYGVVTILSLLVISAPLTGAHADTINDMQKRQNEIEQKKSE
                     LDKNIDSKNSELNHLESAEKDAAKELELLMKSLDATNKKLKEQEDKVSSENEKLKKLQ
                     KEMEKLRNDIRDRQKVLDNRARAIQTTGTATSYLDMIFEADDFKELVDRVTVVSAIVK
                     ADQNIMQDQKDDQDKLKVAESASQKKLENLKVLAVELEVSKNNMESQKQEKNDLVMAL
                     ANKKDLTKSEQTLLASEQGALTDEEKRLASNIAGEKAKQEAAIKAAEEKRMQEAAAAS
                     AKSSSVVKQQPSSDSSGATETVSSGGGQFIKPASGILTSGFSERTNPVTGKYESHKGQ
                     DIAGGGTVTVSAAASGTVVFSGFGASGSGFGGYGYVVKIDHGNGFQTLYGHMRAGSLK
                     VVTGQQVSQGQPIGIMGSTGQSTGQHLHFEIHKNGIPVDPAPYI"
     gene            9543..10991
                     /gene="cls"
                     /locus_tag="U0290_000478"
     CDS             9543..10991
                     /gene="cls"
                     /locus_tag="U0290_000478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HEM2300529.1"
                     /translation="MGLLAYLLVILLILNVFFAAVTVFLERRDTSATWAWLLVLTFVP
                     IFGFIIYLIFGRKLSGKKIFDWKGQEKIGIQESTANQIEMIRQKEFPFSDPNVKKHRD
                     LIYLLLVNDGAILTQDNEVELFVDGHEKFDALIADIEKAKDHIHLIYYIFHSDELGNR
                     LMRVLERKAAEGLNVKIIYDAMGSRTTKKSFFRTFQKNGGLVRPFFPSKLPLINFRLN
                     YRNHRKLAIIDGDVGYIGGFNIGDEYLGASKKFGYWRDTHLRVHGKAVYAMQTRFIMD
                     WNSASSTHKIDYKARYFPTFHGKGHTSMQIVSSGPDSEWQQIKNGYIKMINAAKKTIY
                     LQSPYFIPDASLLEAIKIAALSGVDVRVMIPNKPDHAFVYRATTNYAGELMETGAKIF
                     IYDNGFIHAKTLVVDGEIASVGTANMDFRSFRLNFEVNAFIYEKQMVQKLEDAFLEDI
                     LKSYQLTPELYAKRSLWIKFKEAVSRLLSPIL"
     gene            11019..12194
                     /locus_tag="U0290_000479"
     CDS             11019..12194
                     /locus_tag="U0290_000479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease"
                     /protein_id="HEM2300530.1"
                     /translation="MDVFVEILNGIGRLLLQPALYVGILLAILAGFNRVRWERKSFSI
                     SIYSPWLELKSFFGVSLLFGLAISVVTSLIGFGVMIEWVAIFNVVACFLLIVGMFRLS
                     STAFTIGITSLIFYFCYYFDVSLAPFTNEAFTYDSIFIDNFMISMTFLLAVLLFVEAF
                     LIQYTSAKNPSPSLRKSKRGKLIGSFQLRKLWFVPIVMFLPGDVFTKIFEWWPVFAIG
                     SQSYSLIILPLFIGFQQQVQTQLPEEASRKIAVEVTTLATIIAVAGLLGIVMPVLTLF
                     AFMFAVIGRFWISYRHYRSEKLAPKKFGPQPDGLVVLGARAATPSARLNLKAGEKITE
                     VNSRPVHTREELYEALNLNRAFCKLKVIDNAGEPRFEQTALYENESFELGLLLVEPR"
     gene            12345..13055
                     /locus_tag="U0290_000480"
     CDS             12345..13055
                     /locus_tag="U0290_000480"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2300531.1"
                     /translation="MVKILVVDDEASIVTLLQFNIEKAGFDVVTAEDGRTGYELALSE
                     KPDLIVLDLMLPEMDGIEVTKKLRQDKVNVPILMLTAKDEELDKIIGLELGADDYMTK
                     PFSPREVVARIKAILRRTEGKAEIIEEITEDSEATILIGDLKILPDSYEVYLQDDLLD
                     LTPKEFELLLFLANHRGKVFSRDQLLDTVWNYDYVGETRIVDVHVSHLRDKIELDTKQ
                     PKYIKTIRGFGYKMENVK"
     gene            13055..14830
                     /locus_tag="U0290_000481"
     CDS             13055..14830
                     /locus_tag="U0290_000481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain-containing protein"
                     /protein_id="HEM2300532.1"
                     /translation="MKKLWLKIGLSFFILFFVVMVIVGVFSGELMKSTYLNMKENQLE
                     DDAKILLQTTNMENLDLDKDAATIQKSLDPLGEDIDARITVIDSKGDVVADTKKDPEK
                     LDNHMNRPEVTDILKKGESVGISIRESDSLGYSMLYVAVPVKHQGKTDGVLRISISLE
                     SVDAAVAKLWGNLALIFGIALVIIAAISVFIARKITRPVREIIEVSTDLANHKYDSRI
                     HGKISGELQDLSISVNTLAESLETQMFEIKQNEQRLNAIVQNLVSGVMLINVDKQVIM
                     TNRTMYQILGETEITGKPFYEVIKSFALSQLIEATFETKTIQQKEIILYFPREMILDA
                     SVSPILGENGEITGIILLLHDITQIRHLENVRSEFVTNVSHELKTPVTALKGFAETLL
                     DGAMYDEVLLKKFLTIIKEESDRLHRLIMDILALSRIEQNPVAENVELVDVDEVIEQS
                     ARTIFEMATEKNIRVTIPEKTSASVMIETDRDKLQQIVINLLSNAINYTPVDGKVEVK
                     LIEQEAEVIIEVTDNGIGIPAKDIDRVFERFYRVDKARSRHSGGTGLGLSIVKHLVEN
                     CGGRIEVESQEEVGSTFRVTLPKKA"
     gene            15086..15994
                     /locus_tag="U0290_000482"
     CDS             15086..15994
                     /locus_tag="U0290_000482"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2300533.1"
                     /translation="MKKKYLGIVAMLAAVMLVFAACGSDSSSSDKANGSTKGDKEVSG
                     SLTAVGSTALQPLVEAASKEFINTNPKAQINVQGGGSGTGLTQVQQGAVEIGNSDVFA
                     EEKDGVDASKLVDHRVAVVGMAPVVNKDVGVKNITKQQLIDIFTGKTTNWKDVGGKDE
                     KITIINRAEGSGTRATFEKWGLDGKTPVKAQEQDSSGTVRKIVSETPGAISYLAFSYI
                     DASVVGLSLDGVEPTEDKVATNDWKIWSYEHMYTNGEPKGLTKTFLKYMTSDEVQNNI
                     VPQLGYQSIKSMKVERDASGKLTDVK"
     gene            16088..17011
                     /gene="pstC"
                     /locus_tag="U0290_000483"
     CDS             16088..17011
                     /gene="pstC"
                     /locus_tag="U0290_000483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease subunit PstC"
                     /protein_id="HEM2300534.1"
                     /translation="MEAIKEKKLTQTSKKAHLETRGKIITFICISIMVIAAASILFFV
                     ISKGLATFTVNKVSFVDFITGTDWNPSQKDANGNPLVGALPMIIGSFAVTLFAACIAG
                     PLAIGAAIFMVEISPKFGKKILQPVMELLVGIPSVVYGFIGLSVVVPFIRDHISGSGF
                     GIAAATVVLTVMILPTVTSLSVDAIKSVPRHYREASLALGATRFQTIWKVVLRSSRSG
                     ILTAIVFGMARAFGEALAVQMVIGNSAVIPTSLFEPASTLTSILTMGMGNTVMGTLDN
                     NILWSLAMVLLAMSLFFIIVIRFIGRRRKVK"
     gene            17008..17892
                     /gene="pstA"
                     /locus_tag="U0290_000484"
     CDS             17008..17892
                     /gene="pstA"
                     /locus_tag="U0290_000484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter permease PstA"
                     /protein_id="HEM2300535.1"
                     /translation="MNVKTKDKIATGVFYAIAVLIVIILAGLLGYILVKGVPQLSWKF
                     LTTPPQSFQAGGGIGPEIWNSFYMLVITMIISVPISLGAGIYMAEYARKNWITDLIRT
                     TIEVLSSLPSIVVGLFGFLVFVIQMGWSFSVISGALTLTIFNLPLLIRVVEEALNAIP
                     NTQREAGLALGLSRWETITRVLVPAALPAIITGVILAAGRVFGEAAALIFTAGQSTPI
                     LDFTDWNPVNPASPLNIFRPAETLAVHIWKINGEGIMPDAQAVSDGASAVLILSVLLF
                     NVLARLLGKFVYKRMTSS"
     gene            17920..18735
                     /gene="pstB"
                     /locus_tag="U0290_000485"
     CDS             17920..18735
                     /gene="pstB"
                     /locus_tag="U0290_000485"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEM2300536.1"
                     /translation="MLTKKPEINTILQATPDPHSLPAAMATEDLHVYYGDNHAIKGVD
                     LTFPENKVTALIGPSGCGKSTYLRALNRMNDEIDGCRMEGQILYDGININRKEVDLYN
                     VRKEIGMVFQKPNPFTKSIYENVAFGLKRHGMKNKKEIMERVEKSLRRAALWDEVKDD
                     LGKSALSLSGGQQQRLCIARAVAMQPKVLLLDEPASALDPISTSKIEDLINELKNKYT
                     IIIVTHNMQQAARVSDYTSFFYLGEVVEFSGTSELFTNPQQKQTEDYISGNFG"
     gene            18750..19529
                     /gene="pstB"
                     /locus_tag="U0290_000486"
     CDS             18750..19529
                     /gene="pstB"
                     /locus_tag="U0290_000486"
                     /EC_number="7.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate ABC transporter ATP-binding protein"
                     /protein_id="HEM2300537.1"
                     /translation="MTTETAEKVEYIIETKDVDLFYGSKQALQKIALNIKKNQVTALI
                     GPSGCGKSTFLRTLNRMNDLIPNVKTTGEIHIGGENVQDPKIDMVNLRKKVGMVFQQA
                     NPFPFSIYDNVAYGPRMHGIKDKKVLDEIVERSLRQAALWEEVHDRLDRSAIGMSGGQ
                     QQRLCIARVLAVKPDVILMDEPTSALDPISTAKVEDLILELKKDYTIVIVTHNMQQAS
                     RISDETAFFLNGRIVEFADTTSIFTNPAEKETEDYISGRFG"
     gene            19542..20201
                     /gene="phoU"
                     /locus_tag="U0290_000487"
     CDS             19542..20201
                     /gene="phoU"
                     /locus_tag="U0290_000487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate signaling complex protein PhoU"
                     /protein_id="HEM2300538.1"
                     /translation="MVVRKIFTEQLNDLHQHLMEMGMLANEAIFKAVKSLVHRDTELA
                     KQVVAEDKAINNMELSLEQRSFELIALQQPVGMDLRKIVTVLKTSSDLERIGDHAVSI
                     AKTAILIGESKVLKPIPEIPEMGEIVKAMLQDVLKAYLAEDEVAARKIAERDNEVDKL
                     HKIVYQKCIHFMQEEPEHIEDVSQLLLVSQYIERIGDYVTNVCEWIVYLKSGEIEDLN
                     R"
     gene            20469..20774
                     /locus_tag="U0290_000488"
     CDS             20469..20774
                     /locus_tag="U0290_000488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2300539.1"
                     /translation="MENAKQSLDEETLFSVTQIFKALSDPTRVQILNLLQDREYSVNE
                     IARTLAFNQTTVSHQLRFLKNLRLVKSRREGTTIYYMQDDNHVLELLTQAIRHVHHH"
     gene            20880..21266
                     /locus_tag="U0290_000489"
     CDS             20880..21266
                     /locus_tag="U0290_000489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300540.1"
                     /translation="MKKLSPMQKFIVIIGIIVMIIIAILAVVWNSNLTAVIGLSVVQF
                     IIIQFVCYVGIYSHMKVGTARGTKLFSWGILTTLLFSAIIFIFATDNFRTYSAAMIAL
                     IGYAAALMMREIENTNPANKKQKREE"
     gene            21288..21935
                     /locus_tag="U0290_000490"
     CDS             21288..21935
                     /locus_tag="U0290_000490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM2300541.1"
                     /translation="MGIHQYFQSLSDLENIYRCPGKFKYQEHSVAEHSYKVTSIAQFF
                     GAVEEEAGNEVNWRALYEKALNHDYSELFIGDIKTPVKYATTELREMLSEVEESMTKN
                     FIEREIPETYQPIYRHLLKEGKDSTLEGKILAISDKVDLLYESFGEIQKGNPENIFVE
                     IYSEALATIYQYREMASVKYFLKEILPDMLAEKGIEKTELPQLTTEITTKALRDA"
     gene            21956..22195
                     /locus_tag="U0290_000491"
     CDS             21956..22195
                     /locus_tag="U0290_000491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbA family protein"
                     /protein_id="HEM2300542.1"
                     /translation="MDQIISALIFPCLLVILFARITYNRYVALLLMVILIVASAKLGY
                     TNSMWLIIIDAFSMTIGFVLATYMLRRLKKSGSDF"
     gene            22446..24422
                     /gene="uvrB"
                     /locus_tag="U0290_000492"
     CDS             22446..24422
                     /gene="uvrB"
                     /locus_tag="U0290_000492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrB"
                     /protein_id="HEM2300543.1"
                     /translation="MKDKFELVSKYSPQGDQPRAIEQLVAGLKKGLKHQTLLGATGTG
                     KTFTVSNVIQEVNKPTLVMAHNKTLAGQLYSEFKEFFPNNAVEYFVSYYDYYQPEAYV
                     PQSDTYIEKDASINDEIDKLRHSATAALFERRDVIIIASVSCIYGLGSPIEYGEMLVS
                     LRVGMEISRDQLLRKLVDIQYDRNDIDFQRGRFRVRGDVVEIFPASRDEHCMRIEFFG
                     DEIERIREVDALTGEIIGEREHVSIFPASHFVTRPDIMKKAIVNIKAELEDRLQVLRA
                     DNKLLEAQRLEQRTNYDLEMMEEMGYCSGIENYSRHLSLRPAGVTPYTLLDYFPDDFQ
                     MVIDESHVTMPQIRGMFNGDQARKQMLVDHGFRLPSALDNRPLRLEEFEKHINQIMFI
                     SATPGPYELEKNPDVIEQIIRPTGLLDPIVEIRPIQGQIDDLMDEINDRVEKNERVLI
                     TTLTKKMSEDLTNYLKEAGVKVQYLHSEVKTLERIEIIRDLRLGVYDVIVGINLLREG
                     IDLPEVSLVAILDADKEGFLRSERSLIQTMGRAARNENGRVIMYADKMTDSMRNSIGE
                     TERRRKIQIEYNEKHGITPKTIKKEIRGIIAATSAADEREAVKQHDLSKMSKKERDVF
                     IEGMEHEMKEAAKALDFERAAELRDALLEIKAEG"
     gene            24430..27300
                     /gene="uvrA"
                     /locus_tag="U0290_000493"
     CDS             24430..27300
                     /gene="uvrA"
                     /locus_tag="U0290_000493"
                     /EC_number="3.1.25.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEM2300544.1"
                     /translation="MDKEKIVIQGARAHNLKNIDVEIPRDKLVVMTGLSGSGKSSLAF
                     DTIYAEGQRRYVESLSAYARQFLGQMDKPDVDLIEGLSPAISIDQKTTSRNPRSTVGT
                     VTEIHDYLRLLYARVGHPVCPNHGIEITSQTIEQMVDRVLEYPEKTRIQIMAPIVSGK
                     KGTHKKTIEEIKKEGYVRIRVDGEIYDINDEIEIEKNKKHSIEIIIDRIVIKEGINTR
                     LYDSIEAALRLADGYAVVDIMGDKELLFSEHYACPYCGFSVGELEPRMFSFNSPFGAC
                     PTCDGLGTKLEVDVDTVIPDRSLSLNEGAIIPWRPISSQYYPQMLASACKEFGIDMDT
                     PLEKLTKEELDIILNGSKDKEFYFEYKNDFGMTRETWIPFEGILPNIERRYRETNSDF
                     TRDQMAQYMTDLPCPSCKGYRLKEETLSVKVNNHHIGQISEFSINEALDFFDGLELSE
                     KETQIAAPIFKEVRARLGFLKNVGLDYLTMSRAAGTLSGGEAQRIRLATQIGSRLTGV
                     LYILDEPSIGLHQRDNDRLISTLQSMRDIGNTLIVVEHDEDTMMAADYLIDIGPGAGE
                     HGGRIVAAGTPEEVAKNKNSITGDYLSGKKFIPVPAKRRKGNGLELEIIGAKANNLKN
                     VNAKIPLATFSCVTGVSGSGKSSLVNEVLRKALARKLNRNHAKPGEHKEIKGIENLEK
                     IINIDQSPIGRTPRSNPATYTGAFDDIRDLFASTNEAKVRGYKKGRFSFNVKGGRCEA
                     CKGDGIIKIEMHFLPDVYVPCEVCHGKRYNGETLDIRYKGKNIAEVLEMTVEEGLEYF
                     TNQPRIARKLQTIVDVGLGYIRLGQPATTLSGGEAQRVKLASELHKRSNGKSFYILDE
                     PTTGLHADDIGRLLKVLQRLVEENGDTVLVIEHNLDVIKQADYLIDLGPEGGDGGGQI
                     IATGTPEKIARSKKSYTGKYLKPILERDKERTEERIATAKKK"
     gene            27509..28771
                     /locus_tag="U0290_000494"
     CDS             27509..28771
                     /locus_tag="U0290_000494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 domain-containing protein"
                     /protein_id="HEM2300545.1"
                     /translation="MENERKRILELVKQGIISTEEALTLLENISKKEGKTAAKENIRR
                     SAAPREEEQVEEETKEEPSYDYSKGWNNQGNPYTPPKSRKRRPEPTPENHERDEEEGG
                     ENSSKDREDSMRNMVNDLSQAGEKIGSFLNSAFKQVKDMPFPFLTSTKIERDFIYHDT
                     TLSILEFEIANGNIEFKPSDSNDIKVHAMIKLFKEYPEDEALKIFFDKTTLRVDEETL
                     RFESKSKQIVTNLTVYLPRREYDYVSVKMLNGNFHMDELSGRDLFVKTTNGNISIGTL
                     NATLAEIESINGNVRIQNGEIRDVALKTFNGNVAVKGNYYSTNLQTKNGNVNYQLTGN
                     EATFLKAKTGAGNIDVVVPAAIGVDGRFHTNLGKLLLDLKDAEILESKTESVSKSIIF
                     TKLPDAADSSLKIEAEATTGSVKIRDVK"
     gene            28838..30049
                     /locus_tag="U0290_000495"
     CDS             28838..30049
                     /locus_tag="U0290_000495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 family beta strand repeat protein"
                     /protein_id="HEM2300546.1"
                     /translation="MDKKLRRSRVDRKVGGVFGGLAEFLGIDATLLRLIYIIITIITM
                     KTGIAIIAYIVALFVIPSSDTSNEEVLERHRRRVEEKRNRHLGRNQARQEVREAMRNS
                     HHHRRPRPENAEPIHHGARKKEARPRPVREFNFDNATFRSFTIRVATGDVIIRSWDKE
                     QMKIRAVLAVHEKARSIRQLSEEKLWDYFFSQTMLDISPDNFTFESKNELLKTDLVVT
                     IPKRLYEQVKIQLLNGNLKYDDTAAEDAIIKTRHGDIRSSGASGKFLSTESADGEIFF
                     KRSTVENVDMSTAKGDIALQGSFLTTIAKAAQGDVEYILENDTSSASDLEAPNGDIRI
                     QIPPTWNVDGTLGTKKEKIYFDLKNAKIWDDAERTFVFTQNAEEISMATLQAKVGNGI
                     IKVSELETKNV"
     gene            30073..30273
                     /locus_tag="U0290_000496"
     CDS             30073..30273
                     /locus_tag="U0290_000496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspC domain-containing protein"
                     /protein_id="HEM2300547.1"
                     /translation="MKKLYKSSSQKMIAGVCGGLAEYFGIEVTIIRLLWAGAVLFFGT
                     GILLYILAAIIMPTATPESEWE"
     gene            30282..30635
                     /locus_tag="U0290_000497"
     CDS             30282..30635
                     /locus_tag="U0290_000497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725416.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin family protein"
                     /protein_id="HEM2300548.1"
                     /translation="MRWIIGVIINSVLFVALSGFFTSFHVDGFTTALLASFILAILNM
                     LIRPILLLLTLPINIFTLGLFTFVVNAIMLEMTTFFIGDSFQIDGFGTALILAAIMAF
                     ANMIINSVLWGNKEK"
     gene            30822..31760
                     /locus_tag="U0290_000498"
     CDS             30822..31760
                     /locus_tag="U0290_000498"
                     /EC_number="2.7.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HPr kinase/phosphorylase"
                     /protein_id="HEM2300549.1"
                     /translation="MTKSVTVKDLKERLNLELICSETGLERPISTSDLSRPGLELTGF
                     FSYYPEDRVQLFGMTEISFSEGMEPEERLKRYKQMCTKRTPAFVISRNLEVPKELVAA
                     AKEADIPVLRSRLKTTRLSVYITNYLESRLAPVISMHGVLVDIYGLGVLITGSSGVGK
                     SETALELVKRGHRLVADDNVEIRQEDEMTLIGSSPAIIEHLLEIRGLGIINVMTLFGA
                     GAVRSSKKITIVVHLENWDPDKHYDRVGLDQEKTKIFDMDIPKITVPVRPGRNLSVII
                     EVAAMNFRLKNMGYNAAEQFTQDLNNLIGHNSSMND"
     gene            31846..32679
                     /locus_tag="U0290_000499"
     CDS             31846..32679
                     /locus_tag="U0290_000499"
                     /EC_number="2.4.99.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prolipoprotein diacylglyceryl transferase"
                     /protein_id="HEM2300550.1"
                     /translation="MGNGVQPLDPVAIQIGSISVKWYGVIIASAVVIALLLALSEANK
                     RKMDKEIIVDLLIWAIPISIISARIYYVIFEWDFYKNNLGEIVKIWHGGIAIYGALIG
                     AVLTAIIFSRIKKISFWQLADVVAPSLIIAQAIGRWGNFMNQEAHGAETTRSFLESLH
                     LPDFIINQMYIDGAYYQPTFLYESLWNVLGFIVLLIIRRTKIRRGELFLGYVIWYSFG
                     RFFIEGMRTDSLMWGDFRVSQVLSLLLIVLSIGIIIYRRMKMNPPYYMEDKFGKVVKK
                     K"
     gene            32723..33376
                     /gene="ppaX"
                     /locus_tag="U0290_000500"
     CDS             32723..33376
                     /gene="ppaX"
                     /locus_tag="U0290_000500"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrophosphatase PpaX"
                     /protein_id="HEM2300551.1"
                     /translation="MTGKITTLLFDLDGTLINTNELIIKTFQVTFQEFMPDRVFTRED
                     ILPFIGPSLMETFREINPAHADEMRAFYREYNLKHHDDLILEYDGVYEAIRALYEEDY
                     KLGIVSTKMYDTIMRGLKVTGLDKFFQVVIGLDQVSNAKPDPEGIEMALSLLNATKEE
                     AIMIGDNYHDIEAGKNAETLTAGVAWAIKGPEHLAQFQPDFMLEKMSDLLAIVRDEE"
     gene            33380..33877
                     /locus_tag="U0290_000501"
     CDS             33380..33877
                     /locus_tag="U0290_000501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase"
                     /protein_id="HEM2300552.1"
                     /translation="MRRLDRFKAPDDTVNTLFQVYKTISFWKVLKNTLVIELGRFFPW
                     MGGKRAIYRACLGMEIGEKTAIAYKVMPDLFFPEKIMIGENSIIGYHTTILTHEYLLS
                     EYRVGEVVIGRDVMVGANVTILPGTVIGDGAVIAAGAVVSVDVPAGSFAYGNPLIIKE
                     KATLT"
     gene            33962..>34260
                     /locus_tag="U0290_000502"
     CDS             33962..>34260
                     /locus_tag="U0290_000502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEM2300553.1"
                     /translation="MEKDKKTPAKIYPFYPNGQFYFERGVEAFRDQRIKEAIRYLVRA
                     SELEPGEAVILCQLAICYTEIGQFHKSNQLLREVLEQRNGNMEYCYYFIANNFAY"
BASE COUNT        11446 a         5712 c         7200 g         9902 t
ORIGIN      
        1 tgaagataat tcctgaaagt tattatagat gaaactgcgc gatgacagcg aaaacagtag
       61 aggagaattt aaatggctgg actattgaaa aagatttttg aatcaggaaa aaaagatgtt
      121 aaatatttgg agagaaaagc agatgagatt attgctttag cggatgaaac tgctgctctt
      181 tcggatgatg ctctacgtga aaaaacagta gagtttaaag agcgtgttca aaaaggtgaa
      241 acactggatg acttattggt agaagcattt gctgttgcca gagaaggtgc gaagcgtgcg
      301 ctaggattgt atccatttaa agttcaatta atgggtggga ttgttctcca cgaaggtaac
      361 attgcagaga tgaaaactgg tgaaggtaaa acgttaacag cgacactacc agtttattta
      421 aacgcgcttt ctggtgaagg tgtgcatgtt gttacagtca acgaatactt agctcatcgt
      481 gatgctgaag aaatgggcgt tttatacaat ttccttggac tttctgtagg gctaaaccta
      541 aatgctttat cgagcacaga aaaacgagaa gcttatgcat gtgatattac gtatagcaca
      601 aataatgaat taggatttga ctatttacgt gataatatgg ttgtttacaa agaagaaatg
      661 gtacaacgtc cgctagcttt tgctgttatc gatgaagtcg attccatttt ggtcgatgaa
      721 gcgagaacac cattaattat ttctggtgaa gcagaaaaat cgactattct atatgtgcgt
      781 gcaaatactt ttgtccgtac tcttacagaa gaggaagatt atacagttga tattaaaaca
      841 aaatctgttc aattaaccga agatggtatg acaaaaggag aaaactactt tgatgtagag
      901 aacctttttg atttggaaaa taccgtaatt ttacatcata ttgctcaagc gttaaaagct
      961 aactatacaa tgagcctaga tgtcgattat gttgttcaag atgatgaagt attaatcgtt
     1021 gaccaattca ctggtcgtat tatgaaaggt cgtcgtttca gtgaaggttt acaccaagcg
     1081 cttgaagcaa aagaaggcgt aactattcaa aacgaatcca aaacaatggc gacaattaca
     1141 ttccaaaact atttccgtat gtataaaaaa cttgcaggga tgacgggtac tgcaaaaacg
     1201 gaagaagaag agttccgcga tatttataat atgcgcgtta ttgaaatccc aactaataaa
     1261 gtaattattc gtgatgaccg tcctgattta atttacacaa cgattgaagc gaaatttaat
     1321 gcagtggtag aagatatcgc cgaacgtcat gcaaaaggac aacccgtatt agtcggtaca
     1381 gttgcgattg aaacatccga acttatttct agcaaattaa aacgcaaagg aattaagcat
     1441 gatgtactaa acgcgaagca acatgaacgt gaagctgata tcattaaaca tgcaggtgaa
     1501 cgtggcgcgg tagtaatcgc aaccaacatg gctggtcgtg gtacggatat caaacttggt
     1561 gagggtacga ttgaagctgg aggtttagca gttattggta cagaacgtca tgaatcacgt
     1621 cgtatagata accaattacg tggtcgttct ggacgtcaag gagaccctgg tgtgactcaa
     1681 ttttatcttt ctatggaaga tgaattgatg cgtcgtttcg gttcagacaa tatgaaatca
     1741 atgatggaac gctttggtat ggcagaagat gctatccaaa gtaaaatggt tagtcgtgca
     1801 gttgaatccg cacaaagacg tgtggaagga aataactttg attcccggaa acaagtttta
     1861 caatatgatg atgtacttcg ccaacaacgg gaagttatct ataaacagcg ttatgaagta
     1921 attaatgcag aaaacagttt gcgtgaaatt attgaacaaa tgattcaacg aacggtcaac
     1981 tttatcgttt ctagtaatgc atcaagccat gaacctgaag aagcttggaa tctacaagga
     2041 attatcgact atgtggatgc gaacttactt cctgaaggca ctatcacact agaagatcta
     2101 caaaatagaa caagcgaaga tattcaaaat ttaattttag ataaaatcaa agcggcttac
     2161 gacgaaaaag aaacactact acctccagaa gaatttaacg aattcgaaaa agtagtattg
     2221 cttcgtgttg ttgatactaa atgggttgat catattgatg ccatggatca tttacgtgac
     2281 ggtattcatt tacgtgcata cggtcaaatt gatccgcttc gtgagtatca atcagaaggc
     2341 tttgaaatgt ttgaagcaat ggtatcgtcc atcgatgaag atgttgctcg ttatattatg
     2401 aaagcagaaa ttcgccaaaa ccttgaacgt gagcaagttg ccaaagggga agcaattaat
     2461 cctgctgaag gtaaaccaga agcgaaacgc caaccaatcc gcaaagatca acacattgga
     2521 cgtaatgatc catgcccatg tggtagcggc aaaaaatata aaaattgtca cggtaaagaa
     2581 gcatagattg aaacaattta aaaagcgcct gaaagacggc gctttttgct atgaaagttt
     2641 ataagtaaat ttaaaaaagg tggaattaga atggaattag cagaaattcg taatgaatta
     2701 gaaaaaacag cgcagcaaat caaagacttt agggggtctc tttgacttag acagtatgga
     2761 agttcgaatc gctgagctag aagaccaaat gttagatccg aatttttgga atgaccaaca
     2821 agcggcacag aaagtaatta atgagtcaaa cggatataaa gaaacatacc aagcttttca
     2881 tgcgctagaa gaagaacaag aaagtatgga aattagtcta gaattattaa aagaagaagc
     2941 agatgaagat ttacaagaag aattagaaaa agatattaaa gcttacatgg cgactattag
     3001 tgagtttgaa ttaaaactga tgctaagtga tccatatgac aaaaataatg ctattttaga
     3061 acttcatcca ggtgctggtg gtacagaatc acaagactgg ggttcgatgt tacttcgtat
     3121 gtatcaacgt tggtctgaga agaaaggctt taaagtagag atgcttgatt accaagcagg
     3181 ggacgaagct ggaataaaaa gtgtcacgtt acttataaaa ggccacaatg cttacggcta
     3241 tttaaaagcg gaaaaagggg tgcatcgtct agtgcgtatt tcgccatttg actcatccgg
     3301 cagacgtcat acatcattcg tttccgtgga tgtaatgcct gaattagatg atgatattga
     3361 aattgaagta cgtacagaag acttgaaaat tgatacgtac cgcgcaactg gtgcaggtgg
     3421 acaacatatc aatacaactg actcagctgt taggatgaca catattccat ccggcatcgt
     3481 tgtaacgtgc caatctgagc gttctcagct taaaaaccgt gaacaggcaa tgaaaatgtt
     3541 aaaaacaaaa ttataccaaa aagaacaaga ggaaaaagaa cgcgagctag cagaaattcg
     3601 aggagaacaa aaagaaattg gttggggaag ccaaattcgt tcctatgttt tccaccctta
     3661 ctccatggtg aaagatcatc gcacaaatta cgaaaccggt aatattcaag cggtaatgga
     3721 tggagactta gatgaattta tcaatgcata tttgcgttct aggattggat aaaagagatg
     3781 gcaaataaaa gaaagaaaca accgttatcc ccagttgttt ctaaattaat tgagtatatt
     3841 tatgtcatta taggtgcagc tctcatcgca cttgctttta atgttttact actcccgaat
     3901 cacgttgctt ctggcggagt gagcgggata agtacgatca ttaactattt aacaggttgg
     3961 aatcctgctt ttattcagtg ggcatttaat attcctttat ttctagcggg attattcttt
     4021 ttaggctatc aattcgggtt gaaaactttt gtcggcacga tgcttttacc gttctttgtg
     4081 tatttaacgc aaggcttgga gccatggacg catgaacctc ttgtagctgc tttgtttggc
     4141 ggcgtacttg taggaatggg acttggaatc gtttttcgag gcaaagcatc tactggtggc
     4201 acggatgtcg ctgcacaaat tttgcataag tattctcatc taacattggg aatttgtgtg
     4261 gctttgattg atggattcgt tgttatttcg gcaatgtttg tttttgacat tgaatcaggg
     4321 ctgtacgcac ttgtcggatt attcgctaca agtaaaacaa ttgatttggt acaagttggt
     4381 ttaaatcaat ccaaaacagt ctttattatt tctgaaaatc aagaagcaat ccgccaagca
     4441 attctgttta aaattgaccg aggcattact cggctctccg caaaaggtgg atatacagag
     4501 gatgacaagc aaattttatt atgtgtgatt gcgcaaagtg aattttcaag gttaaaagaa
     4561 gttataaaag aaatagaccc agaggctttt gtggttgtaa tgagcgcaag tgaagtaatg
     4621 ggtgaaggtt ttacttcata aaaaagtacc atttcctaac ttttttagtc aggaaatggt
     4681 acttttttta agttttcagg cccgcttttt gacaatttga tgacaggcga gtttagccta
     4741 gttgcagatc tcgagctatt ttaactagat tggtctattc cgctagctag aactgtaatg
     4801 atttttaatg tacctgtaat gttatttagg gtaaaaacaa gttacaatgt tagcagtaga
     4861 aaagaccaat gtgggttctt ttttattttg tcttaataac actagaccgc agacatatat
     4921 ataaattgga aatcaacgta ataatcgtat ttcctattac aataatcgag atattgtcac
     4981 accctgaaat ataattgtaa tgcaattaac ctatagatga aaaactgtca tggtataatt
     5041 aagcttatgt tgtgagttta aattcgtacc tacaaacaac tcatcttcat ggttaccatg
     5101 cattacctaa aatgtaactc agtagaaagg catagtaagg tgataaaatg atattaatgg
     5161 aagatgttta taagaaatac cctaacggca taacagctgc caatggactc aacattaaca
     5221 ttggcgaagg ggaatttgtt tatgtagtag gcccgagtgg tgctggtaaa tctaccttca
     5281 tcaaaatgat ttacagagaa gaacgagcga caaaaggcaa aatcatcgta gacaaatttg
     5341 atttgattaa tatgaaaaat cgtgaaatcc catatcttcg tcgtaacgta ggcgtggtat
     5401 tccaagatta caaattactt caaagcaaaa cagtttatga aaacattgct tatgcgatgg
     5461 aagtggttga aacagagcca tccgtaatta aagaacgtgt tatggaagta ctagatttag
     5521 tcaaccttaa gcataaagta agaatgttgc cggatgaact ttccggtggt gagcaacagc
     5581 ggatatccat tgcccgctcc attgcaaata tgcctaaagt attaatagca gatgaaccga
     5641 ccggtaacct agatcctgat acttcatggg aaatcatgaa tatccttgaa gaaataagca
     5701 atcgcggaac aaccatcgtg atggcaaccc acaacaaaga aattgttaac acattgaaac
     5761 accgggtagt cgctatcgag aatggaagaa ttgttcgaga tgagcagcaa ggagaatatg
     5821 gctatgaaat ttaggactgt aggaagacat ataagagaaa gttttaagag cctttaccgg
     5881 aatggttgga tgacctttgc agcagcgagt gcagtaacag taacacttat cttagtcagc
     5941 gtgttttttg caatattgat caacatgaac aagcttgcaa cggatgtaga aaacaatgta
     6001 caaattaacg tacatatttc tctaagcgca gacaagaaac agcagcaaga acttgagaaa
     6061 aacattgaga agattgatgg agttgatagt gtcagctttt cttctaagga tgacgaattg
     6121 aagaaattag ttggtgcgta cggcaaaaac ttcgaattgt ttaaacaaga taatccacta
     6181 tacgatgtgt ttgttgtaga ggctaaagag cccacacaaa caaagactat tgcaaaaaaa
     6241 gtagaaaaat tacagtacgt agataatgta gaatatggtg agaaaacagt cgataaattg
     6301 tttgatacct tgaaatgggg acgatatgct ggtattatac taagcattgg gttgttacta
     6361 acagcgatgt tcttaatatc aaacacaatc aagattgcaa ttttctcccg tcgaagagaa
     6421 atagaaataa tgaaattagt aggagcgacc aactggttca tacgctggcc tttcgtttta
     6481 gaaggtgctt ggctaggatt aattggctcg attgtaccag ttgtgttaac atttataggc
     6541 tatgttaata tttacaactt ggtgaatccg aagttagtga caagctcact atcacttctg
     6601 cctccaacac cattcgctta tcaaattagt ggcttgatta ttgcaatcgg cgtactaatc
     6661 gggatttggg gaagcgtaat atctatccgc agattcttga aagtctaact cagaaaatta
     6721 cttaaatcga aataaaaata atttaaaaga aaaagctagg gagcttttta ggaggtaaac
     6781 tttttgaaaa agaatacgtt tattgcgatt tcactcgcag cagttatcag tttgacgcca
     6841 gcttttacga ctaatgtttt cgcggacgtg aatacagaca ttcaaaacca agataaaaaa
     6901 attaacgaca tcaagtctaa aaaaacagat ttacaatcag atctttctgg tttagtagca
     6961 gaccttgaga aagctcaaga aaaagctaaa tctctacaag gagaatttga taaaacaggc
     7021 aaagaactaa aaaaacttaa tgaagatatt aaaagtatca atgaacgtat taaagaacgc
     7081 gaaactgttt taaaagaacg tgctcgtgcg atgcaaaaaa cttctaattc taatgcttat
     7141 cttgaagtta tcttagatgc agaaaatctt tctgacttag ttggtcgtgt ttctgcagtt
     7201 aaccaattag ttgattctga taaatctatt ttagaagatc aacaaaatga tgaaaaagct
     7261 ttaaaaacaa aacaaactgc tgttaagaaa aaacaagaag atcaagcaac agcaattcat
     7321 gaatatgaag cacaacaaaa taaaatcgaa gcacaaaaag ctgaaaaaga agcaatcgtt
     7381 gctcaactag cttctgatca agcaagtgct gaaaatgcaa aagctggtct tgtaagtgaa
     7441 cgtgataaag cagctaaaga agctacagca cgtgcgacag ctttacgtga agcaacatct
     7501 tcaaacgttg gacaagaatc aagtagttct gctacttcta catcaagtgg aaaatctaat
     7561 acaacgaaaa atgttgcatc aaatgataac aattcagcac caagcgcagc aacaccatct
     7621 agtggcggat actcagcaat gattgctgca gctaacgcac aacttggaaa accttatagc
     7681 cttggagcaa ctggaccaag cgcatttgac tgttcaggat ttacttctta tgctttccgt
     7741 gcagctggtg tttctcttcc aagaacatct ggtggacaat atgcagcagc atctaaaatc
     7801 agcgctagcc aagcaaaacc aggtgactta gtattcttta actatggtag cggaattgct
     7861 cacgttggaa tttatgttgg tggcggtcaa atgattaacg ctcaaaacaa tggcgttaaa
     7921 tatgacaaca tcactagcgg ttactgggct aaatatcttg taggatatgg ccgcgtagct
     7981 aacttctaat tattattgaa aagttaaaaa gcacctttgt cgttttaaac aaaggtgctt
     8041 ttttatatgg tatggtaaag ggaattatga agttcctagt caaatagaga atagaaaagg
     8101 agcttaaaat gttaaaaaaa tatggggtag taacgattct tagcctattg gttatttccg
     8161 cgccactaac tggtgcgcac gcggatacta tcaatgatat gcaaaagcgc caaaatgaaa
     8221 ttgaacaaaa aaaatcagaa ctagataaaa atatagactc gaaaaactcg gaattaaatc
     8281 atttagaaag tgctgaaaaa gacgctgcaa aagaattaga attacttatg aaaagtcttg
     8341 atgccactaa caagaaatta aaagagcagg aagataaagt gagctctgaa aacgagaaac
     8401 taaagaaatt gcaaaaagaa atggaaaaac tgcgcaatga tattcgcgat cgtcaaaaag
     8461 tacttgataa tcgagcgcgt gctatacaaa caactggaac agccacttct tatttagata
     8521 tgatttttga agcagatgat tttaaagaac ttgttgaccg cgtgacagtt gtatcggcaa
     8581 ttgtaaaagc ggaccaaaac attatgcaag accaaaaaga tgatcaagat aaactaaaag
     8641 tagcagaatc tgcttctcag aaaaaactag agaatctaaa agtacttgca gtggaattag
     8701 aagtttcgaa aaacaatatg gaaagtcaaa aacaagaaaa aaatgattta gttatggctc
     8761 tagcaaacaa aaaagactta actaagagcg aacaaaccct tttagctagt gaacaaggtg
     8821 cgcttactga tgaagaaaaa cgacttgctt ctaatattgc aggtgaaaaa gcaaaacaag
     8881 aggctgcaat taaagccgct gaagagaagc gaatgcaaga agccgcagca gcaagcgcta
     8941 aaagttcctc tgttgttaaa caacaaccaa gttcagattc aagtggagct acagaaacag
     9001 taagttccgg tggaggccaa tttattaaac cagcttctgg tatattaact tctggattta
     9061 gcgaacgaac aaatcccgtg actggcaaat acgaatccca caaaggtcaa gatattgcag
     9121 gtggcggtac agttactgtt tcagctgcag catcaggaac agttgtattt tcagggtttg
     9181 gcgcatcagg tagtggattt ggtggttatg gttatgtagt aaaaattgac catggcaatg
     9241 gattccagac actatacgga catatgcgtg caggtagctt gaaagtagtt accggccaac
     9301 aagtttccca aggccaaccg attggtatta tgggatcaac aggtcaatcg acaggacaac
     9361 atctacattt tgaaatacat aaaaacggta ttccagtcga tccagcacct tatatttaat
     9421 tcaaaaacca ttgatgaaaa atcaatggtt tttttcttgt gttgaaacga actggaatag
     9481 gctaattgca gattttatga tatgatacta ctatcagttt gtgtaagaaa agggggaaca
     9541 caatgggact gttggcttat ctattagtga ttttgctaat tttaaatgta ttctttgcgg
     9601 cagtgacggt cttcttagaa agacgcgata catccgccac ttgggcttgg ttgctagtct
     9661 taacttttgt tccgatattt ggtttcatta tctatttgat ttttgggaga aaattatcag
     9721 gcaaaaagat tttcgattgg aagggacaag aaaaaattgg gatacaggaa tctactgcca
     9781 atcaaataga aatgatacgg caaaaagaat ttccatttag cgatccgaat gtgaaaaaac
     9841 atcgtgattt aatctattta ttactcgtaa acgatggtgc tattttaacg caagacaatg
     9901 aagtggaact ttttgtagat ggacatgaga aattcgatgc gctaattgct gatattgaaa
     9961 aagcgaaaga tcatatacat ctcatctatt atatttttca ttctgatgaa ctaggcaatc
    10021 gcttaatgcg cgtgctggaa agaaaagcag cagaaggttt aaatgtgaaa attatttatg
    10081 atgcaatggg ttcaaggaca acgaaaaaat catttttccg tacgtttcaa aaaaatggtg
    10141 gtctagttag accttttttt ccgtctaaat taccattgat taactttcgt ctcaactacc
    10201 gaaatcaccg gaaattggct ataatcgatg gagatgttgg ttatattggt ggttttaata
    10261 ttggtgatga atatcttggg gcatcgaaga aatttggtta ctggcgtgat acacatttac
    10321 gtgtacatgg aaaagctgtt tatgcgatgc aaactcgctt tattatggac tggaattctg
    10381 catcatccac acataaaatt gattacaaag cgcgatactt cccgactttt catgggaaag
    10441 gtcatacaag tatgcaaatt gtttcgagtg gtcctgattc cgaatggcaa caaatcaaaa
    10501 atggttacat caaaatgatc aatgctgcta aaaaaacaat ttatttacaa tcaccttatt
    10561 ttattccaga tgcaagtttg cttgaagcaa tcaaaatcgc agcactttct ggggtagatg
    10621 tcagggttat gattcctaat aagcctgacc atgcttttgt ttaccgcgca actactaact
    10681 acgccggtga attaatggaa acgggagcga aaatctttat ttatgataat ggttttatcc
    10741 acgcgaaaac actcgttgta gatggcgaaa ttgcttcagt tggaaccgcg aatatggatt
    10801 tccggagttt ccgacttaat tttgaagtaa atgcttttat ttatgaaaaa caaatggtgc
    10861 aaaaactaga agatgccttt ttggaagata ttctaaaatc gtatcaacta acacctgaat
    10921 tatatgcaaa acgatcttta tggattaaat ttaaagaagc ggtaagccga cttttatcgc
    10981 ctatattata gaagtattag ggaaagctgg tgtagaaaat ggatgttttt gttgaaatac
    11041 taaatggaat agggagacta cttctacaac cagcattgta tgtaggaatt cttttagcga
    11101 tactggctgg ttttaaccgt gtgaggtggg aacggaaatc atttagtatc agtatttatt
    11161 caccttggtt agaattgaaa agtttctttg gtgtgagttt gttatttgga ttagctattt
    11221 ctgttgttac ctcgctcatt ggatttggtg tgatgataga gtgggttgct atttttaatg
    11281 tagtagcttg tttcttgcta attgtaggga tgttccgttt gagttcaacg gcatttacta
    11341 tcggtattac gagtttgatt ttttatttct gctattattt tgatgtgagt ttagcaccgt
    11401 ttacgaatga ggcattcacg tatgactcga tttttattga taactttatg atttccatga
    11461 catttctgct cgcagtattg ttatttgtag aagctttctt aatccagtat acaagcgcaa
    11521 aaaatccctc tccatctctt cggaaaagta agcgcggtaa attaatcggt tcctttcaat
    11581 taagaaaatt atggtttgta ccgattgtta tgtttttacc aggagatgtg tttacgaaaa
    11641 tttttgagtg gtggccagtc tttgctattg gttcgcagtc gtattcatta atcattttac
    11701 cgttattcat cggcttccaa caacaagtac agacacaact tccagaagaa gcaagccgta
    11761 aaattgctgt tgaggtaaca acattagcaa caattattgc tgtagctggt ttattaggaa
    11821 ttgtgatgcc agtactgaca ttgttcgctt tcatgttcgc tgtaattggt cgattttgga
    11881 tttcttatcg ccactatcgt tccgaaaaat tagcaccaaa gaaatttggt cctcagccag
    11941 atgggcttgt agttctgggt gctcgtgcgg ccactccgtc tgcgcgacta aacttgaaag
    12001 ctggtgaaaa aattacagaa gtaaacagtc gaccagtgca tactcgcgag gaactttacg
    12061 aagcgctaaa cttaaaccga gcattttgta agctgaaagt aattgataac gctggtgaac
    12121 cacgttttga acaaacagca ctttatgaga atgaatcatt tgaacttggt ttgttattag
    12181 tagagccaag ataattttag gacaccagtg ttgtttgaaa gcagcattgg tgttttaagt
    12241 ttttgtaaag ataagattaa tataaaggca tttctacccg aaaaaggtta attcatgcta
    12301 tattttagat aaaagtgtta cataaagaag ggatgggaag tacgttggta aaaattcttg
    12361 tagttgatga tgaagcttct attgttacgt tactgcaatt taacattgaa aaagctgggt
    12421 ttgatgtggt aacagcagaa gacggcagaa ccggatacga actcgctttg tccgaaaaac
    12481 cagatttaat tgtgcttgat ttaatgcttc ctgagatgga cggaatcgaa gtaacaaaaa
    12541 aacttcgcca agataaagta aatgtgccaa ttttaatgtt aacggcaaaa gatgaagaat
    12601 tagataaaat tatcggactg gaacttggag cagatgacta tatgactaaa ccgtttagcc
    12661 caagagaagt agttgcaaga attaaagcaa tcttgcgtcg aacagaagga aaagccgaaa
    12721 taatagaaga aataaccgaa gattcggaag ctacgatatt aattggtgat ttgaaaattt
    12781 tgccagatag ttatgaagtg tatttacaag atgatttact tgatttaacg ccaaaagaat
    12841 ttgagttatt gctattcttg gcaaatcatc gtggcaaagt tttctctaga gaccaattgc
    12901 tcgatactgt ctggaactat gattacgttg gagaaacccg aattgtagac gttcatgtca
    12961 gccatttgcg cgataaaatc gaactagata caaaacaacc taaatacatc aaaacaattc
    13021 gtggcttcgg ttataaaatg gagaacgtga aataatgaag aaattatggc tgaaaatcgg
    13081 gttatccttt tttatcttat ttttcgttgt gatggttatt gttggcgttt tttccgggga
    13141 actaatgaaa tcaacgtact taaatatgaa agaaaatcaa ttagaagatg acgcaaaaat
    13201 tctgcttcaa acaactaata tggagaattt agatttagat aaagatgccg caactatcca
    13261 aaaaagtctt gatccacttg gcgaggatat tgatgcacgc attacggtga tcgatagcaa
    13321 aggcgacgtg gtagctgata caaaaaaaga cccagaaaaa cttgataacc atatgaatcg
    13381 ccccgaagta acagatattc tgaaaaaagg ggaaagcgtt ggtatttcaa tccgtgaaag
    13441 tgattcactt ggttatagta tgctttatgt cgcggttcct gttaaacatc aaggcaaaac
    13501 agatggtgta ctgagaattt cgatttcact tgaatctgtt gatgcggcgg ttgctaaact
    13561 ctgggggaac ttagcgctta ttttcggtat tgcacttgta attatcgcag caatcagtgt
    13621 ttttattgct agaaaaatca ctagaccagt tcgcgaaatc atcgaagtct ctacagattt
    13681 ggccaatcat aaatacgata gtcgcatcca cggtaaaata agcggagaac ttcaagatct
    13741 ctccattagt gtaaacacat tagcagaaag cttggaaacg caaatgtttg aaattaagca
    13801 aaatgagcaa cgacttaatg ctattgtcca aaacttagta agtggcgtaa tgctgattaa
    13861 tgtcgataaa caagtcatca tgaccaaccg caccatgtat caaattttag gagagacaga
    13921 aatcaccggc aaaccatttt atgaagtaat taaaagtttt gcactgagcc agttgataga
    13981 agcgactttt gaaacaaaaa ccattcaaca aaaagaaatt attctttatt tcccgcgcga
    14041 aatgattttg gatgcaagtg tttcaccaat tttaggggag aatggggaaa ttactgggat
    14101 tattttatta cttcatgata tcactcaaat tcgccatttg gaaaatgttc gttctgaatt
    14161 tgtcaccaac gtttctcatg aattaaaaac acccgtgacg gctctcaaag gattcgcgga
    14221 aacattactt gacggcgcaa tgtacgacga agtgctacta aaaaaattcc taacgattat
    14281 taaagaagaa agtgatcgat tgcaccgttt gattatggat attctcgcac tttctagaat
    14341 tgaacaaaat ccggtcgcgg aaaacgttga gctggttgac gttgacgagg taattgaaca
    14401 atctgctcgc actatttttg aaatggcaac tgaaaaaaat attcgagtaa ccattccaga
    14461 aaaaacaagt gcatccgtta tgattgaaac agatcgtgac aagctgcaac agatagtaat
    14521 taacttgctt tctaatgcaa tcaactacac cccagtcgat ggaaaagtag aagttaaatt
    14581 aatcgagcaa gaggcagaag ttataataga agtaactgat aacggaattg gcatcccggc
    14641 taaagatatt gaccgcgtgt ttgaacgatt ctaccgagtg gataaagccc gcagcagaca
    14701 ctcaggaggc actggacttg gactttccat cgtcaagcat ttagttgaaa actgtggtgg
    14761 gcgaatcgaa gtagaaagcc aagaagaagt tggctcgacc ttccgcgtca ctttaccaaa
    14821 aaaagcctaa caaatatcct gtttgaaaga atgtaatctt tcagacagga tatttttatt
    14881 ttatttacga aagaaacaaa tttggtgtaa taatttacta gtttgccttc tgtttgaaag
    14941 atattcataa aaaagtttac attttcgaca aaaaatgtgg ttatttacaa ttacttaaca
    15001 ttagctacac accaccttaa atctcagacg ttatagtaat acttgtaagg aataacaatt
    15061 aaaaaaacaa ggtgggaata agataatgaa aaagaagtat ttgggaatag tagcaatgtt
    15121 agcagcagta atgcttgtct tcgcagcatg tggaagtgac agcagttcat cagataaagc
    15181 aaacggatca acaaaagggg ataaagaagt ttctggctca ttaacagcag tcggatccac
    15241 tgcacttcaa ccactcgttg aagcagcttc caaagaattt attaacacta accctaaagc
    15301 acaaatcaac gtgcaaggcg gtggttctgg aactggttta acacaagtac aacaaggcgc
    15361 agttgaaatt ggtaactcgg acgtattcgc tgaagaaaaa gatggcgtag atgcttcgaa
    15421 actggttgac catcgtgtag cagttgtcgg aatggctcca gtagtaaaca aagatgtagg
    15481 cgttaaaaac attacaaaac aacaattaat cgatatcttc actggtaaaa ctactaactg
    15541 gaaagacgtt ggcggtaaag acgaaaaaat tacaatcatc aaccgtgcgg aaggaagcgg
    15601 aacacgtgct actttcgaaa aatggggact tgatggtaaa acaccagtta aagcacaaga
    15661 acaagattca tccggtacag ttcgtaaaat cgtaagcgaa actccaggag caatcagcta
    15721 cctagcattc tcttacattg acgcttccgt agttggactt tcattagatg gcgttgaacc
    15781 aactgaagat aaagttgcaa ctaacgactg gaaaatctgg tcttatgaac atatgtatac
    15841 aaatggcgaa ccaaaaggct taacaaaaac gttcttaaaa tacatgactt ctgatgaagt
    15901 acaaaataat atcgtaccac aacttggtta ccaatcaatc aaatccatga aagtggaacg
    15961 tgatgcatct ggtaaactaa ctgacgtaaa ataaaaagaa tgaaatgggc gtctatccta
    16021 gtaataccgg gatagacgta tacccatgtt aggagtaaac atgggaggag aaaggagctt
    16081 acgtgacttg gaagcgataa aagaaaagaa gcttacacaa acttctaaaa aggcgcatct
    16141 agaaactaga ggcaaaatta ttacattcat ctgtatttca atcatggtta ttgccgcagc
    16201 gtctattttg ttttttgtta tatcgaaagg tttagcaaca tttacagtta ataaagtgtc
    16261 ttttgttgat tttataactg gaacagactg gaatccttcg caaaaagatg caaacggaaa
    16321 tcctctagtt ggcgctttgc caatgattat tggttctttt gcagtaacgc tttttgccgc
    16381 ttgtattgca ggaccacttg caatcggtgc agccattttt atggtggaaa tctcacctaa
    16441 gtttgggaaa aagattttgc aaccagttat ggaactttta gttggtattc catctgttgt
    16501 ttatggattc attggactaa gtgttgtcgt tccatttatt cgtgaccata tttcgggaag
    16561 tggctttggt attgccgctg cgaccgtagt tttaacagta atgattttgc cgactgttac
    16621 ttcactcagc gtagatgcga ttaaatctgt tccacgtcac taccgagaag cttcgttggc
    16681 acttggcgca acacgtttcc agacgatttg gaaagtagtg cttcgtagct cgcgttcagg
    16741 aattttgaca gcgattgtat tcgggatggc tcgtgcattc ggtgaagctc ttgctgtaca
    16801 aatggttatt gggaactctg ctgttattcc aacctcatta tttgagccag cttctacatt
    16861 aactagtatt ttaacaatgg gtatgggaaa tacagttatg gggacgcttg ataataatat
    16921 cctttggtca cttgcaatgg tgttactcgc aatgtcacta tttttcatca ttgtgatccg
    16981 cttcatcgga cgtaggagga aagtcaaatg aatgtaaaaa caaaagataa aatcgcgaca
    17041 ggcgttttct atgctattgc tgtattaatt gtcattattt tagctggctt acttggctat
    17101 attttagtaa aaggtgttcc gcaacttagc tggaagtttt tgacgacccc accacagtcg
    17161 ttccaagctg gcggcggaat cggtcctgaa atctggaatt cattttatat gctcgttatt
    17221 acgatgatta tttctgttcc tatctcgctc ggtgcgggaa tttatatggc agaatatgcg
    17281 cgtaaaaatt ggattacaga tttaattcgt acaacgattg aagtgctttc ctcacttcca
    17341 tctattgtcg tagggctatt cggtttcctt gtttttgtta ttcaaatggg gtggagcttc
    17401 tcggttattt ccggggcgct tacactaacg attttcaatt taccactatt aattcgtgtt
    17461 gtcgaagagg cacttaatgc tattccaaac acgcagcgtg aggcagggct tgctctcggt
    17521 ttatccagat gggaaacaat cacgcgagta cttgttccag ccgcactccc ggcaattatt
    17581 accggagtta tcttagcagc aggacgggta tttggtgaag cagcggcgct tattttcaca
    17641 gccggtcaaa gtacacctat tcttgatttc actgactgga atccggtcaa tccagcttca
    17701 ccactaaata ttttccgccc agcagaaacg ttagctgttc atatttggaa aattaatggt
    17761 gaggggatta tgccagatgc acaagccgtt tctgacggag cttctgcggt attaattctt
    17821 tccgtattac ttttcaacgt cttagctcgc ctgcttggaa aatttgttta taaacgcatg
    17881 acctcgtctt aaaaagccag gaaaaggaga ttttaaatga tgttaacgaa gaaacctgaa
    17941 attaatacaa ttttacaagc aacaccagat cctcattcac ttcctgctgc aatggcgacc
    18001 gaggatttgc acgtatatta tggcgataat cacgcaatta aaggtgttga tttaaccttc
    18061 ccggaaaata aagtgacagc tttgattgga ccatctggtt gcggtaaatc cacatattta
    18121 agagcattaa accgaatgaa cgatgaaatt gatggttgcc gcatggaagg tcaaatttta
    18181 tacgatggga ttaatattaa tcgtaaagaa gttgatttat acaatgttcg caaagaaata
    18241 ggcatggtat tccaaaaacc aaatccattc acgaaatcta tctatgaaaa tgttgctttt
    18301 ggcctcaaac gtcatggcat gaagaataaa aaagaaatta tggagcgtgt ggagaaaagt
    18361 ttgcgccgag cagctctttg ggacgaagta aaagacgatt taggaaaaag cgcactatcc
    18421 ctttctggtg ggcagcaaca acgtctttgt attgctagag ctgtcgcaat gcagccaaaa
    18481 gtattgttac ttgatgagcc agcatctgca cttgatccaa tttcgacaag caaaattgaa
    18541 gatttaatta atgagttgaa aaataaatat actattataa tcgtgacgca taatatgcaa
    18601 caagcggctc gtgtatccga ctacacttct ttcttctatc tgggggaagt cgtggaattc
    18661 tcaggaacat ccgaactttt cacgaatccg caacaaaaac aaactgaaga ctatatttct
    18721 ggtaactttg gctagaaagg agctttttta tgacaactga aactgctgaa aaagtagagt
    18781 atatcattga aacaaaagat gtagatttat tttatggttc caaacaagca ctacaaaaaa
    18841 tcgctttaaa cattaagaaa aatcaagtga ccgctctaat tggtccgtcg gggtgtggga
    18901 aatcaacttt tctgcgtacg cttaaccgaa tgaatgattt aattcccaat gtgaaaacga
    18961 ctggagaaat ccatattggc ggtgaaaatg tacaagatcc taaaattgac atggttaact
    19021 tacgaaaaaa agtgggtatg gttttccaac aagcaaaccc attcccgttt tcgatttatg
    19081 ataatgtcgc ttatggtccg cggatgcatg gtataaaaga caaaaaagta cttgatgaga
    19141 ttgtagaaag aagtttgcgt caagcggctc tttgggaaga agtgcatgat aggctggatc
    19201 gttcggcgat tgggatgtca ggtggacaac aacagcggct ttgcatcgca cgagttctag
    19261 ctgttaaacc ggatgttatt ttgatggatg agccaacttc tgcactggac ccaatttcga
    19321 cagcaaaagt agaagatttg attttagaat taaagaaaga ctatacgatt gttattgtga
    19381 cgcataatat gcaacaagca tcccggattt ccgatgaaac tgcctttttc ttaaatggtc
    19441 gcatcgtgga gttcgcggat acgacgagta tttttaccaa cccagcagaa aaggaaacag
    19501 aagactatat ttcaggaaga tttggataaa ggagtgttat tatggtagtc agaaaaattt
    19561 ttacggaaca gttaaacgac ttgcaccaac atctaatgga aatgggaatg cttgcgaatg
    19621 aagcgatttt taaagcagtc aagtcacttg tacaccgcga taccgagctt gctaaacaag
    19681 tagttgcaga agataaagca atcaataaca tggagctttc actggaacaa cgctcttttg
    19741 agttgatcgc tttgcaacag ccagttggta tggatttgcg aaaaatcgtc acagtactaa
    19801 aaacaagttc ggatttagaa cggattggtg accacgcagt aagtattgcc aaaacggcta
    19861 ttttaattgg tgaaagtaag gttttaaagc cgattcccga aataccagaa atgggcgaaa
    19921 ttgtaaaagc aatgctacaa gacgtattaa aagcttacct tgcagaagat gaagttgctg
    19981 ctcgcaaaat tgctgagcgc gataatgaag tcgataagct tcataaaatc gtttatcaaa
    20041 aatgtattca ttttatgcaa gaagagccag agcatataga agatgtttca caactactct
    20101 tagtttccca gtatatcgaa cgtattggtg attatgtaac aaatgtgtgc gaatggattg
    20161 tttacttgaa gagtggcgaa attgaagatt taaacagata aaaaaagccc gattttcctt
    20221 tccacaggtt aatcgggctt tttttggtgt gttaggcggt ttaaataact tctcaatatt
    20281 taaaaccctt ttattcccca gctctccttt cttaatgata aaaaaattgt atcattgaaa
    20341 cagagaaaat cttgtttttg ctcatattta atcatttttt aatagatgtg ttgttaaact
    20401 tgcggaatca ttcctattta agtatcatat gagtatatga acatatatgg aaaatggagt
    20461 gatatttaat ggaaaacgca aaacaatctt tagatgaaga aacgctattt agtgttacgc
    20521 agatatttaa ggcgctttct gatccaacgc gtgtgcagat tttaaatttg cttcaagacc
    20581 gcgaatactc tgtgaatgaa attgcgcgaa cacttgcgtt taaccagaca actgtttctc
    20641 accagctgcg ttttttaaaa aacttaagac ttgtgaaatc aagacgtgaa ggcacgacga
    20701 tttattatat gcaagatgat aatcacgtat tagaattact cacacaagca attcgccacg
    20761 tgcaccatca ttaagtaaga acgctcagaa aaccttttag gaatgatggg tgttttttat
    20821 cccaaataaa cagagattat ggtaaagtaa gtaacaaata aaagcttgga ggaagtattt
    20881 tgaagaaatt atcaccaatg cagaagttca ttgttattat agggattatt gtgatgatta
    20941 ttattgcgat tttagcagtt gtttggaata gtaatctcac agcagttatt ggtttatctg
    21001 ttgtgcaatt tattatcatt cagttcgttt gttatgttgg tatttattcg catatgaaag
    21061 tcggaacggc gcgcggaaca aagttgttta gctggggaat actgacgaca cttttatttt
    21121 cagcaattat ttttattttt gctaccgata attttagaac ttactcagcc gcaatgattg
    21181 ctttaattgg ttatgctgcg gcgctgatga tgcgtgaaat cgaaaacact aatccggcca
    21241 ataaaaaaca aaaacgtgaa gaataaaacg aaggatggag ggataatatg ggaattcatc
    21301 aatatttcca aagtttatca gatttagaaa acatttatcg ttgcccagga aaatttaaat
    21361 atcaagagca ctctgttgca gaacattcat ataaagttac atccattgct caatttttcg
    21421 gcgctgtaga ggaagaagct gggaatgaag tgaattggcg tgcactatac gaaaaagcgc
    21481 taaaccacga ttattcagag cttttcatcg gggatattaa aacgcctgtg aaatatgcaa
    21541 cgacagaact ccgcgaaatg ctttcagaag tagaagaaag catgacaaaa aattttattg
    21601 aacgagaaat cccagaaacg tatcaaccaa tttatcgtca tttgctaaaa gaaggtaaag
    21661 acagtacgtt ggaagggaaa atcctcgcaa tttctgataa agtagacctg ttatatgaat
    21721 cctttggtga aattcaaaaa ggaaatccag aaaatatttt tgtggagatt tatagtgaag
    21781 cacttgcaac catttatcag taccgagaaa tggctagcgt gaagtatttt ttaaaagaaa
    21841 ttttaccaga tatgcttgct gaaaaaggta tcgaaaaaac agaattacca cagcttacaa
    21901 cggaaataac gaccaaagca ttgcgagacg cgtaaaaaag ggggaggaaa gtaagatgga
    21961 tcaaattata tctgcgctta ttttcccttg tctccttgtt attctttttg cgagaatcac
    22021 ctataatcgt tatgtcgctt tgcttttgat ggtaattttg atcgtcgctt ctgccaagtt
    22081 aggttataca aattctatgt ggcttattat tattgatgct ttttcgatga ccattggttt
    22141 tgtgcttgca acatatatgc tgcgacgttt aaagaagagt ggcagtgatt tttaacaaag
    22201 caaatatata ggtagaaaag cgtaaaagtg ataaaataaa gaaaagcgta atccacaggt
    22261 tgcgtttttt atttttcaac aaatgcgaaa atatgttcgg tttttgctag gctaattaaa
    22321 atatttatga taaaatagaa acattaacgg atctgaaaaa tccgcttttt gctttgctgg
    22381 acttttcaca aataaagctt ttcagatacc agaatcggac cgataaagaa tagggggaat
    22441 ccgagttgaa ggataaattt gagttagttt ctaagtatag cccacaagga gaccaaccta
    22501 gagcgataga acaattagtt gcgggattaa aaaaaggctt gaaacaccaa actttacttg
    22561 gtgcaaccgg tacagggaaa acttttaccg tatccaacgt gattcaggaa gtaaataagc
    22621 caacacttgt catggcccac aataagacgt tagcaggaca gctgtatagc gagtttaaag
    22681 aatttttccc aaataacgct gtagaatatt ttgtcagtta ctatgattac tatcaaccag
    22741 aagcctatgt tccgcaaagc gacacgtata tcgaaaaaga tgcaagtatc aatgatgaaa
    22801 ttgataagct tcgtcactct gctaccgctg cgctttttga acgtcgtgat gtaattatca
    22861 ttgcgagtgt atcgtgtatt tatggcttag gttcgccgat tgaatatgga gagatgctcg
    22921 tttcgcttcg tgttggtatg gaaattagcc gtgatcagct actgcgtaaa ttagtagaca
    22981 ttcaatatga tcgaaatgat atagattttc aacgtggacg cttccgtgtt cgcggtgatg
    23041 ttgtcgaaat tttcccggca tcaagagacg agcactgcat gaggattgaa tttttcggtg
    23101 atgaaattga acgtattaga gaggtagatg cacttactgg cgaaattatt ggagaaagag
    23161 aacatgtttc cattttcccg gcatctcact ttgttaccag acctgatatt atgaaaaaag
    23221 caattgttaa tataaaagcg gaactcgaag accgccttca agttttacgt gcagataata
    23281 aattactcga agctcagcgc cttgaacaac ggacgaatta tgatttagaa atgatggaag
    23341 aaatgggtta ttgctctggt attgagaact attctagaca tttatccctt cgtccagcgg
    23401 gagttacacc atacacgtta ctcgattact tcccagacga tttccaaatg gtaattgatg
    23461 agtcacacgt tacgatgcca caaatccgtg gtatgtttaa cggtgaccaa gccagaaaac
    23521 aaatgctagt tgatcatggt tttagactac caagtgcttt agataaccgt ccgctaagat
    23581 tagaagaatt tgaaaaacat atcaatcaaa ttatgttcat ttccgccaca ccaggccctt
    23641 atgaactaga aaaaaatccg gatgtcattg aacaaatcat ccgaccaacc ggcttgctag
    23701 atccaatcgt agaaattcgc ccgattcaag gacaaatcga tgacttaatg gatgagatta
    23761 atgatcgtgt cgagaaaaac gaacgtgttt taatcaccac tttaacgaaa aaaatgtcag
    23821 aggatttgac caattatctc aaagaagctg gtgttaaagt acaatatctc cactcggaag
    23881 tgaagacgtt agagcgaatc gaaatcattc gcgacctccg acttggtgtg tatgatgtta
    23941 tcgttggaat taatttactt cgcgaaggaa tcgatttacc tgaagtatct cttgtcgcta
    24001 ttttagatgc ggacaaagaa ggattccttc gttccgagcg ttccttaatt caaacaatgg
    24061 gtcgagccgc tcgtaatgaa aacggtcgag taatcatgta tgctgataaa atgaccgatt
    24121 cgatgcgcaa ttctattggc gaaacagaac gccgtcgtaa aatccaaatt gaatataatg
    24181 aaaaacatgg cattacgcca aaaacaatca aaaaagaaat tcgtggtatc atcgcagcga
    24241 cttctgccgc agatgaaaga gaagcagtga agcaacatga tttaagcaaa atgtctaaga
    24301 aagaacgcga tgtgttcatt gaaggtatgg aacatgaaat gaaagaagca gccaaagcac
    24361 ttgatttcga acgtgctgct gaacttcgcg atgctttact ggaaataaaa gcggaaggat
    24421 gaagcgaaat tggataaaga gaaaatagta attcagggtg caagagccca taacttaaaa
    24481 aacattgatg tagagattcc tagagacaaa ttagtagtta tgactggact ttcaggttca
    24541 ggtaaatctt cgcttgcttt tgatacgatt tacgcagaag gacaaagacg ttatgtagag
    24601 tctttgtccg catatgcgcg ccaattttta ggccaaatgg ataaaccaga tgtagattta
    24661 attgaaggat taagccctgc catttcgatt gatcaaaaaa caacaagccg taatccacgt
    24721 tcaactgttg gtactgtcac agaaatccat gactatttgc gcttacttta tgctcgtgtt
    24781 gggcatccag tttgtccaaa tcacggtatt gaaatcactt cccaaacaat cgaacaaatg
    24841 gtggatcgcg ttctagaata tccagaaaaa acacgtattc aaataatggc tccaatcgtt
    24901 tctggtaaaa aaggaaccca taagaaaact attgaggaaa taaaaaaaga aggctatgtt
    24961 cgaattcgtg ttgatggaga aatttatgat atcaatgacg aaattgaaat cgagaagaat
    25021 aaaaagcatt ctattgaaat cattattgat cgcattgtga ttaaagaagg tatcaatact
    25081 cgtttgtatg actccattga agcggctctt cgtttagctg atggttatgc ggttgttgat
    25141 ataatgggcg ataaagaatt attatttagt gaacactatg cgtgccctta ttgtgggttt
    25201 tccgttggtg aattagaacc aagaatgttc tctttcaata gcccatttgg cgcttgtcca
    25261 acatgtgatg gacttggcac taaacttgaa gtcgatgtcg acacagttat tccagataga
    25321 agtctgtctc taaatgaagg tgctattatt ccttggcgcc caattagctc gcaatactat
    25381 ccacaaatgc tagcttcggc ttgtaaagag ttcggaatag atatggatac acctttggag
    25441 aaactaacga aagaagaatt agatattatt ttaaatggat caaaagacaa agaattctac
    25501 ttcgaataca aaaatgattt tggaatgaca cgcgaaacgt ggattccttt tgaagggata
    25561 cttccaaata tcgaacgccg ctatcgtgag acaaattccg actttacgcg tgatcaaatg
    25621 gcgcaatata tgactgattt accatgtcca tcttgtaaag gttatcgtct aaaagaagaa
    25681 acactttctg ttaaagtaaa caatcatcat attggccaaa tcagtgagtt ttctattaat
    25741 gaagcactag atttctttga tggcttagaa ctctctgaaa aagaaacaca aattgcagcg
    25801 ccgattttca aagaagttcg tgctagacta ggcttcttaa aaaatgttgg gctcgactat
    25861 ctaacaatga gccgtgcagc tgggacgcta tctggtggtg aggcgcagcg aattcgactt
    25921 gctacacaaa tcggttccag acttactggg gtactttata ttctagatga accttccatc
    25981 ggtcttcatc aacgagataa tgaccgttta atcagcacac tccaaagtat gcgtgacatt
    26041 ggaaacacgc ttattgtcgt tgagcatgac gaagatacga tgatggccgc agattatctt
    26101 attgatattg gtccaggtgc aggggaacac ggtggacgaa ttgttgcagc cggaactcca
    26161 gaagaagttg ccaaaaataa aaattccatc actggtgact atctttcagg taaaaaattt
    26221 attccagttc ctgctaaacg tagaaaaggt aacggactag aattagaaat tattggtgct
    26281 aaagcaaata atctcaaaaa cgtaaatgca aaaattccac tagctacttt ttcttgtgta
    26341 actggagttt caggttcagg taaaagttcg ctagtgaatg aagtattacg aaaagcatta
    26401 gcgagaaaac taaatagaaa ccacgcaaaa ccaggtgaac ataaagaaat aaaaggtatc
    26461 gaaaacctag aaaaaatcat caatatagat caatcaccaa tcggaagaac accgagatcg
    26521 aatccagcta cttatacagg ggctttcgat gatattcgtg acctttttgc aagcacaaat
    26581 gaagccaaag ttcgcggtta taaaaaaggt cgctttagtt ttaacgtaaa aggtggacgt
    26641 tgtgaggcgt gtaaaggcga cggaatcatc aaaattgaaa tgcatttctt gcccgatgta
    26701 tatgtaccct gtgaagtttg tcatggaaaa cgatacaatg gcgaaacgtt agatattcgt
    26761 tacaaaggca aaaatattgc tgaagtatta gagatgactg tagaagaagg cctagaatat
    26821 ttcactaacc aaccgagaat tgcacgtaaa ctgcaaacga ttgtggatgt tggacttggt
    26881 tatattcgac ttgggcaacc tgctacgact ctttctggtg gtgaagcaca gcgtgttaag
    26941 ctagcttcgg aacttcacaa gcgtagtaac ggaaaatctt tctatattct tgatgaacca
    27001 accactggtc tccacgcaga tgatattggt cgtttactca aagtattaca aagacttgta
    27061 gaagaaaatg gcgacacagt acttgttatt gagcataacc ttgacgtaat taaacaagcg
    27121 gattacttga ttgatttagg accagaaggc ggcgatggtg gcggtcaaat tattgcaacc
    27181 ggcacacctg aaaaaatcgc tcgctcgaaa aaatcatata caggtaaata cttgaaacca
    27241 attttagaac gcgataaaga acgcacagaa gaacgaatcg caacagccaa gaaaaaataa
    27301 tcaaaacccc gcttatgcaa aacataagcg gggtttttaa tagtccttaa gaacaaacca
    27361 cccaaagtcc aaacaaataa tcatcctctg gttgtatgac agaaattata ttttccttca
    27421 taatagagtc atagataaaa cagatatgtc acttgcatgt gaaagcaagc ctaaaatagt
    27481 ttagcctaaa ttataggagg aaatgaaaat ggaaaatgaa cgtaaacgta ttctcgaatt
    27541 agtaaaacaa ggtattatat ccactgaaga agcccttact ctacttgaaa atatttccaa
    27601 aaaagaaggt aaaacagcag caaaagaaaa tattcgtcgg tctgcggctc cgagagaaga
    27661 agaacaagtc gaagaagaaa caaaagaaga accatcatac gattacagta aaggttggaa
    27721 caatcaagga aacccttata cacctccaaa aagtcgtaaa agacgcccag aaccgactcc
    27781 agaaaatcat gaaagagacg aagaagaggg cggcgaaaat tcttctaaag atcgtgaaga
    27841 ctccatgcgc aatatggtta atgatttatc ccaagcgggt gaaaaaatcg gttctttcct
    27901 aaatagtgca tttaaacaag tgaaagatat gccattcccg ttcttaactt caacgaaaat
    27961 cgaacgtgat ttcatttatc atgacacaac actttctatt ttagaatttg aaattgctaa
    28021 tggtaatatt gaatttaaac catctgattc gaacgatatc aaagttcacg cgatgattaa
    28081 actattcaaa gaatatccag aagatgaagc acttaaaatc ttctttgata aaacaacttt
    28141 acgtgtagat gaagaaactt tacgttttga gtctaaatca aaacaaatcg ttacaaactt
    28201 aactgtatac ttgcctcgtc gtgagtacga ttatgtttcc gttaaaatgc ttaatggtaa
    28261 cttccatatg gatgaattat ccggtcgtga tttatttgtg aaaacaacca atggtaatat
    28321 tagtattggt actttaaatg ctactttggc agaaattgag tcaattaatg gtaatgttcg
    28381 tatccaaaat ggtgaaattc gtgatgttgc actgaaaaca ttcaacggta acgtagcagt
    28441 aaaaggtaat tattactcca ccaatttaca aactaaaaat ggtaatgtaa attatcaact
    28501 aactggaaat gaagctactt tcttaaaagc aaaaactggt gcaggtaata tcgatgtggt
    28561 tgtacccgca gcaattggtg tagatggccg tttccacaca aacttaggta aattactttt
    28621 agatttaaaa gatgccgaaa ttcttgaatc taaaacagag tccgtaagta aatcaattat
    28681 tttcactaaa ctaccagatg cagctgattc ttccttgaaa atcgaagcag aagcaactac
    28741 tggctccgta aaaattcgcg atgtaaaata attaaacgaa atctagcgcc ggaatgcgcg
    28801 ctagatttta catagatata agaaaggaag agctaacatg gataaaaaat taagaagatc
    28861 aagagtggac cggaaagtcg gcggtgtgtt tggtggacta gctgagtttc tagggataga
    28921 tgccacactt ctgcgactaa tttatattat catcaccatt attacgatga aaaccggtat
    28981 tgcgattatc gcttatatag tagccttgtt tgtgattcct tcttccgata caagtaatga
    29041 agaagtactt gaacggcatc gtcgccgcgt ggaggaaaaa agaaatcgtc acctaggacg
    29101 taatcaagct agacaggaag tgcgagaagc aatgagaaat agtcatcatc atagaagacc
    29161 aagaccagaa aatgctgaac caattcatca cggcgcaagg aagaaagaag ctcgccctcg
    29221 tccagtacga gaattcaatt ttgataatgc gactttccgt tcctttacta ttagagtggc
    29281 gaccggggac gttattatcc gttcttggga caaagaacaa atgaaaatcc gtgcagtact
    29341 agctgtacat gaaaaagcgc gatctattcg tcaattaagc gaagaaaaac tatgggatta
    29401 cttctttagt caaacgatgc ttgatatttc tccggacaat ttcactttcg aatcaaaaaa
    29461 tgaactttta aaaaccgatt tagttgttac tattccaaaa cgtttatacg agcaagtgaa
    29521 aattcagctc ttaaatggta atttgaaata tgacgataca gctgctgaag atgctattat
    29581 taaaacacgt cacggtgata ttcgctcatc aggagctagt ggtaaatttt tgagcacaga
    29641 atcagcggat ggagaaattt tcttcaaacg tagcacagta gagaatgtag atatgtctac
    29701 tgctaaagga gatattgcgc ttcaaggtag ctttcttaca acgattgcta aagctgcaca
    29761 aggggacgtt gagtatatac tcgaaaatga tacttcctcg gcctcagatt tagaagcacc
    29821 aaatggcgat attcgaattc aaattccgcc aacatggaat gtcgatggaa cacttggaac
    29881 taaaaaagaa aaaatctatt ttgacttaaa aaatgcaaaa atttgggatg acgcagaaag
    29941 aacttttgtc ttcactcaaa acgcagaaga aataagcatg gcgacacttc aagcaaaagt
    30001 aggaaatgga attattaaag tttctgaact ggaaacaaag aacgtttaat aaaatgaaag
    30061 gaagggaaaa caatgaaaaa gttatataaa tcttcatcac aaaaaatgat tgctggtgtc
    30121 tgtggtgggc ttgcagaata ctttggcatt gaagtaacca tcattcgttt actttgggct
    30181 ggagcagttc tattctttgg tactgggatt ttactgtata ttctagctgc gattattatg
    30241 ccaacagcaa cacctgaatc agaatgggag tgaactaaaa catgcgttgg attataggcg
    30301 taattattaa ctcggtgctt ttcgtagctt tatcaggatt ctttacaagt tttcatgtag
    30361 atggattcac gacagcgcta ctagcgagtt ttatattagc aattctaaat atgctaatta
    30421 gacctatttt actcctttta acattaccaa ttaatatttt cacacttgga cttttcacct
    30481 ttgttgtgaa tgcaattatg cttgaaatga ctaccttctt tattggagat tctttccaaa
    30541 ttgatggttt tggaacagcg ttaattctcg cagcaattat ggcattcgca aacatgatta
    30601 ttaattccgt tttatggggt aacaaagaaa aataaacatt ccagctacat tttgaggcta
    30661 aaaatagtct tttaaatgta gctggttttg ctatgtagag ccatttgagt agaaagaggt
    30721 agcttgattc cttctaaagt gctaaaatga gaaggagctt tctaaataat attttgtagc
    30781 gaacagtaat ggacttttat aattcatttg gaggtacttg catgacaaaa tcggttacgg
    30841 taaaggattt aaaggaacga cttaatttag agttaatttg ttcggaaacg ggacttgaac
    30901 ggccaatttc aacaagtgac ttatctcggc cggggctgga acttactggg tttttctctt
    30961 attatccaga agatcgtgtg caactttttg gcatgactga aatatcgttt tctgaaggaa
    31021 tggaacctga agaacgtctc aaaagatata aacaaatgtg tacgaagcgg acgcctgctt
    31081 ttgtgatttc tagaaattta gaagtgccga aagaattagt agcagcagcg aaagaagctg
    31141 atattccggt attacgttca cgacttaaaa cgacacgttt atctgtttat attacgaatt
    31201 acttagaaag cagacttgcg ccagttattt cgatgcatgg tgttctagtg gatatatatg
    31261 gtttaggtgt gttgattacg gggagcagtg gtgttggtaa aagtgaaaca gcactggagc
    31321 ttgtaaaacg cgggcataga cttgtagcag atgataacgt agaaattcgt caagaggatg
    31381 aaatgacgtt aattggttct tctccagcaa ttattgaaca tttactcgag attcgcgggt
    31441 tggggattat taatgtaatg actttatttg gagcaggagc tgttcgttct agtaaaaaaa
    31501 ttactatcgt tgtgcacctt gaaaattggg atcctgataa gcattatgat cgtgtcggat
    31561 tagaccaaga aaagacaaaa atctttgata tggatattcc gaaaattacg gtgcctgttc
    31621 gaccgggacg aaatttatct gttattattg aggtagcggc aatgaatttc cgattaaaga
    31681 atatggggta caacgcggca gagcaattta cacaagacct gaataattta ataggtcata
    31741 acagcagtat gaatgattaa ataaatagtg aaagcatctc cgcagccaaa ctttacaaaa
    31801 atgcttgttt ggttgcggag ttgtcttttt gaaagtaggg gaattatggg taatggtgtt
    31861 cagccacttg atccggtggc gattcaaatt ggtagtatat ctgtgaaatg gtacggagtt
    31921 attattgctt cggctgttgt catcgcgtta cttcttgctt taagtgaagc aaacaagcgc
    31981 aaaatggata aagaaattat tgtggatttg ctgatatggg caattccgat ttcaattatt
    32041 agtgctcgaa tttactatgt tatttttgag tgggatttct ataagaataa tttaggcgaa
    32101 atagtgaaaa tctggcacgg aggtattgct atttatggcg cgctaattgg tgcagtttta
    32161 acggcaatta ttttctcgcg gattaagaaa atttcgttct ggcaacttgc ggatgtcgtt
    32221 gcgccaagtt tgattattgc gcaggcaatc gggcgttggg gaaacttcat gaaccaagaa
    32281 gctcatggtg cagaaacaac gcgttctttt ctggaaagcc ttcatttacc agattttatt
    32341 atcaaccaga tgtacataga tggtgcttat tatcaaccga ctttcttata tgagagttta
    32401 tggaatgtgc ttggatttat tgttctatta attattcgtc gcacaaaaat tcgtcgtggg
    32461 gagttgttcc tcggctatgt aatttggtat tcatttggaa gattctttat tgaaggaatg
    32521 cggacagata gcttaatgtg gggggacttt agagtttcgc aagtgctatc tttacttctt
    32581 attgttttgt ctattggtat tattatttat cgtcgtatga aaatgaatcc accatattat
    32641 atggaagata aatttggtaa agtagttaaa aagaaataaa aaagttggag attttcgagt
    32701 ttgattaaga aaggaagaaa ttatgactgg gaaaattact acattgttgt ttgacttaga
    32761 tggtacgctt ataaatacga atgaattgat tatcaaaaca tttcaagtga catttcaaga
    32821 attcatgccg gaccgggttt ttactagaga ggacatttta ccgtttatcg ggccttcttt
    32881 aatggagact ttccgggaaa taaatccagc gcatgcagat gagatgcgcg ctttttaccg
    32941 agagtataat ttgaagcatc atgatgattt aattttagaa tatgatggag tttatgaagc
    33001 aattcgtgct ttatatgaag aagattataa acttggaatt gtatcgacga aaatgtatga
    33061 tacgattatg cgaggtctca aggtaactgg cttggataaa tttttccaag tggtgattgg
    33121 gttagatcaa gtgtctaatg ctaaaccaga tcctgaaggt attgagatgg ctctttcttt
    33181 attaaatgcg acaaaagaag aagcgattat gattggcgat aattatcatg atattgaagc
    33241 tggaaaaaat gcggaaaccc taaccgcggg tgtagcttgg gcgattaaag gaccagaaca
    33301 tttggcgcag tttcagccag atttcatgtt agaaaaaatg agcgatttac tcgcaattgt
    33361 tagggacgag gaatagaatt tgaggcggct ggataggttt aaggcacccg atgatacagt
    33421 caacaccctt tttcaagtgt ataaaacgat ttctttttgg aaggttttga agaatacgct
    33481 agtaatagaa cttggtcgtt tttttccatg gatgggcggt aagcgtgcaa tttatcgcgc
    33541 atgtcttgga atggaaattg gcgagaagac tgccattgcc tataaagtta tgccggattt
    33601 attttttccg gaaaagatta tgattggcga aaactcaatt attggttatc acacaactat
    33661 cttgacgcat gaatatttac tttcggagta ccgtgttggg gaagttgtga ttggtcggga
    33721 tgtgatggtt ggcgcgaatg tcaccattct tccgggcaca gtaattggag acggggctgt
    33781 gattgctgct ggggcggttg tctcggtgga tgtcccggct ggtagttttg cttatggaaa
    33841 tccattaata ataaaagaaa aagctactct gacgtaaaag tcaaagtagc tttttttgtc
    33901 gcccaaagtc ataaattcta tgttatactc attaggataa aggtatcttg gaggtggaaa
    33961 aatggaaaaa gacaaaaaaa cacccgcaaa aatctatcca ttttatccaa atggtcagtt
    34021 ttattttgaa cgcggtgtcg aagcgtttcg tgatcaaaga attaaagaag caatcaggta
    34081 tttagtgcgg gcatccgaac tggagccagg agaagctgtt attctttgtc agctggcgat
    34141 atgttataca gaaattggtc aattccataa atcgaatcag ctacttagag aagttttaga
    34201 acagcgtaat gggaacatgg aatactgtta ttattttatt gctaataatt ttgcgtatat
//
LOCUS       DASDYO010000011        33910 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.011, whole genome shotgun sequence.
ACCESSION   DASDYO010000011 DASDYO010000000
VERSION     DASDYO010000011.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 33910)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33910)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33910
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.011"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(17..1228)
                     /gene="thiI"
                     /locus_tag="U0290_000503"
     CDS             complement(17..1228)
                     /gene="thiI"
                     /locus_tag="U0290_000503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 4-thiouridine(8) synthase ThiI"
                     /protein_id="HEM2300554.1"
                     /translation="MEFDRMLIRYGELSTKGKNRKQFVTKLAQNVKRAMTDLPEVRIH
                     GERDRMYIILNGADYQLAEERLKPIFGIQSFSPAVRVNLDVEEVKAAALALVQDAHEE
                     NGTFKVAARRSHREFPLDSNEINQEIGAYVLQNMEDLTVNVKNPDVKLTIDVRKEGVF
                     LSCRTILGAAGLPVGSSGRAMLMLSGGIDSPVAGYLAQKRGVEIEAVHFHSPPYTSEQ
                     AKQKAVDLAAKLAKYSGQVQMHIVPFTEIQEVIKQQIPESVIMTVTRRMMLRITDELR
                     RRRNGLAIVNGESLGQVASQTLESMLAINAVTATPIIRPVVSMDKNEIIQIAQKIDTY
                     NLSVQPFEDCCTIFTPPSPKTKPKLDKIEHYESFTDFEALIAKALDNIETISVNVAET
                     AQVKDEFADLF"
     gene            complement(1230..2369)
                     /locus_tag="U0290_000504"
     CDS             complement(1230..2369)
                     /locus_tag="U0290_000504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM2300555.1"
                     /translation="MIYFDNSATTKPNAAVLETYTKVASNYFANPSSLHRFGAKSKEL
                     LDASRKQIAAMVSALPEEIIFTSGGTEGNNLAIKGLVYSYQNRGKHIVTSSIEHPSVR
                     MVMEELEQEGFTVTYLPVDKNGVIKMEALKAALTDETILVSIMGVNNEVGSIQPLHEI
                     GEMLKLLEHTFFHVDFVQGIGKIPLALNENAIDLLTFSGHKFHALRGTGILFKRKNVH
                     LHSEILGGGQEMGYRSGTENLAGNVALAKALRLTLENEPRKEALIEIRDYLLTEIAQM
                     SDMTVHTKQSVAAPHIVCFSAKGHRGEILVHALEKEDIYISTTSACSSKQKLASSTLK
                     AMGVTDEEATGAVRVSLSYENRLSEAKIFIQKLQEIIENLNKVVK"
     gene            complement(2497..4212)
                     /gene="ezrA"
                     /locus_tag="U0290_000505"
     CDS             complement(2497..4212)
                     /gene="ezrA"
                     /locus_tag="U0290_000505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation ring formation regulator EzrA"
                     /protein_id="HEM2300556.1"
                     /translation="MYYMLIGFIIVVIAVIGAGYILKRKHYQRINELEEKKIKLRERP
                     VIDELSKVKKLKLTGQTEALFESWRSSWDEIETRLFPDLEEVLLEAEMNTDRYKFRSA
                     THAENDIEQMLVVIEKQMDQILGGLKELLISEEKNAKESRATKEKFAELRREVLTRGF
                     KLGETLPYIETKLSELSESLNSYDSLTDQGDHLEAREIVIVVQKEMQVIEAQMERIPS
                     LLHETDTILPEEMTKLRAGYEEMVRKGYYLAQMELDKEISRMKNQIDKMKKNVINLDL
                     DEAEQGVEELHNEIDLFYDTLEHEAEARHFVKENHSPTSDKLQRQNAVSDALAEQITE
                     VKQTYHVAEDDLAVYLKTSAKLSEAKENFEQLTALIASGEIAYSAAQDTLKEIDAALI
                     TISAEQDKFAEELRSLRKDELEARDDAERMRRAIITLDRKMERERLPGLPEEYLSLRE
                     HMGESINALEKRLEEKPLNMKAVSQDWRIAEEDLTHLTEKAEEMMENVRLVEHVIQYA
                     NRYRLRNKELADELVQAENHFYNDYQYKKALEIAVTALEKVETGAFKKVEKAYESKVS
                     VDDIE"
     gene            4506..4994
                     /locus_tag="U0290_000506"
     CDS             4506..4994
                     /locus_tag="U0290_000506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAF domain-containing protein"
                     /protein_id="HEM2300557.1"
                     /translation="MIEIKKMTGTKEENYALALKQVQAMIAGEPNLIANLSNVSSILN
                     QALSDINWVGFYLLEKETNQLVLGPFQGLPACIRIPLGKGVCGSAASDQKTYIIENVH
                     DFPGHIACDAASNSEIVLPIVKNNQLLGVLDIDSPLFNRFDEVDQLWLEKIRDAITQE
                     IN"
     gene            5206..5808
                     /gene="rpsD"
                     /locus_tag="U0290_000507"
     CDS             5206..5808
                     /gene="rpsD"
                     /locus_tag="U0290_000507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S4"
                     /protein_id="HEM2300558.1"
                     /translation="MARYTGPSWKVSRRLGISLSGTGKELERRPYAPGQHGPTQRKKI
                     SEYGLQQAEKQKLRHMYGLTERQFKNTFNKAGKLQGKHGENFMILLEQRLDNIVYRLG
                     LARTRRAARQLVNHGHITVDGKRVDIPSYQVSVGQVISVREKSAKNSAIAESLEVSSF
                     VPEYVTFDAEKLTGSLNRLPERSELAAEINEAFIVEFYSR"
     gene            complement(5908..7167)
                     /locus_tag="U0290_000508"
     CDS             complement(5908..7167)
                     /locus_tag="U0290_000508"
                     /EC_number="6.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine--tRNA ligase"
                     /protein_id="HEM2300559.1"
                     /translation="MNIIDELEWRGAIYQQTDEEGLRKWVEEKQISLYCGIDPSGDSM
                     HIGHLIPFMILRRFQNAGHRPIILVGGATGTIGDPSGKKEERKLQSMEQISKNVESLR
                     VQLGKIFDFEGNSAASMVNNYDWTKDVSILDFLRDYGKEFNVNTMLSKDIVASRLEVG
                     ISFTEFAYQILQAMDFNHLYEFNDCRLQIGGSDQWGNITAGLDLIRKKQGENAKAFGL
                     TIPLLTKADGTKFGKSEGGAIWLNPEKTTPYEFYQFWINTDDRDVVKYLKYFTFLTEA
                     EIDELAKQVETEPHLRAAQKTLAAEMTKFVHSEEALEQALKISKALFSGDVKALTADE
                     IEQGFKDVPTFVAEDTEANLVDWLVTLGIEPSKRQAREDVANGAIYINGERQQDLEKI
                     MDASDRIENKFTIVRRGKKKYFLVSYK"
     misc_binding    complement(7227..7435)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(7489..8496)
                     /gene="ccpA"
                     /locus_tag="U0290_000509"
     CDS             complement(7489..8496)
                     /gene="ccpA"
                     /locus_tag="U0290_000509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="catabolite control protein A"
                     /protein_id="HEM2300560.1"
                     /translation="MNVTIYDVAREANVSMATVSRVVNGNPNVKPVTRKKVLDVINQL
                     GYRPNAVARGLASKRTTTVGVIIPDISNVFYAELARGIEDIATMYKYNIILSNSDENE
                     DKELQVLNTLLGKQVDGIIYMGERISEQLQEEFDRSPAPVVLAGAVDMENKFASVNID
                     YKQATKEAVKRFVDNGHKQIAFVSGSLNEPVNREMKLAGYKEALEEAGISYQEDYIIE
                     AKYNYNAGVKVWAELSALSKKPNAVVVADDELAIGILNAALDAGIKVPEDLEVMTSNN
                     TKLTLMSRPQLSTIVQPLYDIGAVAMRLLTKLMTSEEVDEKTVILPHSEKLRGTTKEK
                     K"
     gene            complement(8731..9816)
                     /locus_tag="U0290_000510"
     CDS             complement(8731..9816)
                     /locus_tag="U0290_000510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional 3-deoxy-7-phosphoheptulonate
                     synthase/chorismate mutase"
                     /protein_id="HEM2300561.1"
                     /translation="MVNTNLEELRTQVDQLNIDLLELISKRANLVQEIGKIKGTQGSL
                     RFDPLREREMLNTILAANEGPFEDSTVQKLFKEIFKAGLELQEEDHSKALLVSRKNKK
                     EDTIVTVKGLPIGNGEPVFVFGPCSVESYEQVAAVAESIKAKGLKLIRGGAFKPRTSP
                     YDFQGLGLEGLKILKRVSDEYGLGVISEIVTPADIEVALDYVDVIQIGARNMQNFELL
                     KAAGRVDKPILLKRGLSATIEEFIGAAEYIMSQGNGKIILCERGIRTYEKATRNTLDI
                     SAVPILKKETHLPVMVDVTHSTGRKDLLLPCAKAALAIEADGVMAEVHPDPAVALSDS
                     AQQMDIPEFEEFWNAILASNLVPHKIK"
     gene            complement(10036..10560)
                     /locus_tag="U0290_000511"
     CDS             complement(10036..10560)
                     /locus_tag="U0290_000511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEM2300562.1"
                     /translation="MAEKDGINTKDFLIGGLIGAIVGSAAALLFAPKSGKELREDLNT
                     QVDTIKEKGNQWKDVAYEKGIEISGVAKGTKDKLVDSAGGFVDVVKDKSGKLADTVSK
                     QSKAVKEVVSQNKEENQEAAKQAADAVKNEAKDAADDVEKAADKAKKEAKKAVDEGKD
                     EAKKIASDVKKEVK"
     gene            complement(10582..11037)
                     /locus_tag="U0290_000512"
     CDS             complement(10582..11037)
                     /locus_tag="U0290_000512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF948 domain-containing protein"
                     /protein_id="HEM2300563.1"
                     /translation="MIVILYIAALIAAIALLVIAIYLGKTLKSTSQTMDEVAKSLEKI
                     TVEVQGITGQSQKLLDKTNTLLEDVNGKVAKVDPVFDAVGDIGTSLLGLSQSVRELAT
                     LATNKVEQNEAKISQAVSISNSILSFREKMKANKAAKEAAKEAAEQSNF"
     gene            11293..12405
                     /locus_tag="U0290_000513"
     CDS             11293..12405
                     /locus_tag="U0290_000513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M29 family aminopeptidase T"
                     /protein_id="HEM2300564.1"
                     /translation="MRDARIEKLAHNLINYSVKLGAGEKVLIENFGVQKELVMALVEE
                     AYKAGGFPFVSLKEPQIDRAMMLGADSSQYAKIAEFEGNVMKEMDAYIGLRAGDNINE
                     TSDVPADKLKIHGETVGKMHSDIRVKQTKWVVLRYPSSSMAQLAKMSTAGFEDFYFDV
                     CNLDYGKMSDAMDGLVELMNKTDKVHLVGPGTDLTFSIKDIPAIKCAGEMNIPDGEVF
                     TAPVRDSINGTLTYNTPSPYQGFTFENVSFTFKDGKIIEATANDTARINKVLDTDEGA
                     RFVGEFAIGVNPFIHEPMQDILFDEKIEGSFHFTPGQCYDEAFNGNQSAIHWDLVNIQ
                     RADYGGGEIYFDEVLIRKDGIFVLPELEALNPENLV"
     gene            complement(12446..12991)
                     /locus_tag="U0290_000514"
     CDS             complement(12446..12991)
                     /locus_tag="U0290_000514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxiredoxin"
                     /protein_id="HEM2300565.1"
                     /translation="MAERLVGTQAPRFEMEAVMPNQTFGKVSLEKNIEDDKWTILFFY
                     PMDFTFVCPTEIVAISARSDEFDALNARIIGASTDTIHSHLAWTNTPIKEGGIGRLNY
                     PLAADTNHQVASDYGVLIEEEGVALRGLFIINPKGEIQYEVVHHNNIGREVDEVLRVL
                     QALQTGGLCPINWQPGEKTIV"
     gene            complement(13136..14479)
                     /locus_tag="U0290_000515"
     CDS             complement(13136..14479)
                     /locus_tag="U0290_000515"
                     /EC_number="6.3.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate--L-alanine ligase"
                     /protein_id="HEM2300566.1"
                     /translation="MTIYHFVGIKGSGMSALAQILHDKGFQVQGSDVDKYFFTQKALE
                     EKQIPIMTFSADNIQEGLTIIAGNAFPDTHEEIERALELGLPVIRYHKFLGQLIDGYT
                     SIAITGSHGKTSTTGLLSHVVGAIRPTSYLIGDGTGSGTKGAEYFALEACEYQRHFLA
                     YKPTYAIMTNIDWDHPDYFKSVDDVFNAFETLGKQVKKAVFALGDDAELRKLTLDIPI
                     IYFGFGEENEFQAKNVIKETTGTKFDVYHRGEFLGSFEIPTYGDHNVLNALSVIALCD
                     YEGLPVEDVKKELKTFEGVKRRFSITEKANQVLVDDYAHHPSEIRATVNAARQKYPDK
                     KVVAVFQPHTFTRTRTFLQGFADSLNLADEVYLCDIFGSAREKTGNLTIADLAHKTKG
                     NHIIKEEHTEELLKYPEAVILFMGAGDVQKFQAAYEKVLDHEVLTEADLKKSAIN"
     gene            complement(14774..17125)
                     /locus_tag="U0290_000516"
     CDS             complement(14774..17125)
                     /locus_tag="U0290_000516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEM2300567.1"
                     /translation="MGWFKDFFFGDMDEEIDTYEDTSSRKVEKKAKQRAPEVVPKSNV
                     TAIKTKERTIRNERPVAYKTVPKQKHMQPVKRQMKTQMVYQYPKGEFRFPLIPDKQKS
                     QPIQPKKQPITKRQAAETQPVKEETRKRPFTATDVPSPVYAFNKRPSKFEFAVTEAEE
                     LSTIQEDLTITPVDLLDSAEAETIAFDTELNRQIEEEIVSVPVTEEVITEQPEVKVTP
                     EPVEQQEPARVSLITEEPAQTKTTTRSKQVESNRQEQLLKSRIPFNVMMVKKDKQALR
                     KEEAQEINGQQPVEVEAEQTNTVREAQVATVSYPTNYEFPSFSLLHPPVSKREDDSWL
                     QMQQEMLDETLENFNVQASVVNRTQGPAVTRFEVQPEKGVKVSKITNLTDDIKLNLAA
                     KDIRIEAPIPGKSTVGIEIPNQTSRPVMLSELMNTEAFQSSTSPLTAALGLDISGTPI
                     ITDLQKMPHGLIAGATGSGKSVCINSLLVSLLYKATPDQLKLLLIDPKMVELAPYNRI
                     PHLVSPVITDAKAATVALKWAVEEMERRYQLFSHTGVRNMEKYNEYASHPDHIGEKLP
                     YILIVIDELADLMMVAPNDVEESISRIAQKARACGIHMIVATQRPSVDVITGLIKANI
                     PTRVSFSVSSQIDSRTILDASGAEKLLGKGDMLFLPSGASKPVRLQGTFVSDEEIDAV
                     VAHVRSQGEADYIFEEQELLVKETAKENTDELFEEACDFVLSQNAASTSLLQRHFRIG
                     YNRAARLMESLENHQIVSGINGSKPRDVIITKDQLAKLRNKES"
     gene            complement(17435..18052)
                     /locus_tag="U0290_000517"
     CDS             complement(17435..18052)
                     /locus_tag="U0290_000517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4479 domain-containing protein"
                     /protein_id="HEM2300568.1"
                     /translation="MIVNAFYNKEGVGDTLLIETGEVTFENREWERRGDVARIFDRET
                     KELAGYNIFNSSNYFNITANGKVDLTEELVAQMNQVIEKAGFEPEIVADLSPKFVVGY
                     VESKEKHPNADKLNVCKINVGDEVLQIVCGAPNIDAGQKVVVAKIGAVMPSGLIIKPS
                     NLRGEDSFGMVCAARELAIPDAPTEKGIMVLEESAVVGEAFPVNF"
     gene            complement(18058..18858)
                     /locus_tag="U0290_000518"
     CDS             complement(18058..18858)
                     /locus_tag="U0290_000518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1444 domain-containing protein"
                     /protein_id="HEM2300569.1"
                     /translation="MAKMTTLKMKEKLEKELQAPNRQFSYNRDNDTLTVAQNGKKVTL
                     TIPQIIANFENDGNAAVEKIVYYVEEGFRAAAGNVELENNKASIYPVVRATSFPDETK
                     AGEALLTDDHTAETKIFYAVDLGKSYRFIEESMLKKAQLTHKEIREVAFNNLANLEIP
                     LKKDSVNGNDFYFVRTNDGYDASRLLNEAFLREMREKLTGEMVLAVPHQDVLIIGDIQ
                     DNTGYDVLAHMTMDFFADGLVPITSLPFVYNNGKLEPIFIMAKNRLKE"
     gene            complement(18893..19204)
                     /locus_tag="U0290_000519"
     CDS             complement(18893..19204)
                     /locus_tag="U0290_000519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM2300570.1"
                     /translation="MKKLESVEQFDAIKSEGKSVFMFSADWCGDCKFIEPVMPEIEAE
                     NEDFVFYHVDRDEFIDLCADLAIFGIPSFLAFEDGEEVGRFVSKDRKTKEEINDFLAA
                     I"
     gene            complement(19319..19537)
                     /locus_tag="U0290_000520"
     CDS             complement(19319..19537)
                     /locus_tag="U0290_000520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300571.1"
                     /translation="MREIIKKPVIVVGLFLLVASLVFLLGYVTDLPYFRDSELGWIWT
                     TMIAGIVTLFFGYFHDFLEKKKARSKVR"
     gene            complement(19530..20603)
                     /locus_tag="U0290_000521"
     CDS             complement(19530..20603)
                     /locus_tag="U0290_000521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HEM2300572.1"
                     /translation="MEKETLAMFKELTELQGTSGDEHRIRAFMRKELEPVSDEIIQDG
                     LGGIFGVRHGAEGGPRVLVAAHMDEVGFMVTRITENGLIRFQTIGGWNPQVLQAQRVQ
                     IMAPNGPVIGVVASVPPHLLSEAERSKPTDPKNLLIDIGADDKADAEKIGIKPGQFIV
                     PVAEFTPLANPKKILAKAWDNRYGVGLAIELMKELKGESLPNTLFAGANVQEEVGLRG
                     AGVSANMIKPDLFFALDASPANDTTGNKSQFGQIGQGFLLRIFDRTMIMHRGMREFLL
                     DTAETNKIPYQYFVSPGGTDAGKVHTSLSGIPSAVIGVPARYIHSSNSILHVDDYAAA
                     KEMITTLIRSLDKTTYETIKNNA"
     gene            20801..21112
                     /locus_tag="U0290_000522"
     CDS             20801..21112
                     /locus_tag="U0290_000522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEM2300573.1"
                     /translation="MNWKAFIAGVGAGAAAGHLVYHYLLSDKTISGDVILEKVKDAFK
                     QEGPIEGSWIQLKKQHYKKFAIDTFVYHGGITCIREGEKKQFEFIADANTGTIIDVYL
                     A"
     gene            complement(21149..21397)
                     /locus_tag="U0290_000523"
     CDS             complement(21149..21397)
                     /locus_tag="U0290_000523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sensitive transcriptional regulator"
                     /protein_id="HEM2300574.1"
                     /translation="MEIEQKKALVTRFAKIEGHVRSIKTMTEEERDLETIMQQIAAVK
                     KAMDAAAKLIYTEQMKELIEQGETDEVVIKKKIDSFIR"
     gene            complement(21532..22383)
                     /locus_tag="U0290_000524"
     CDS             complement(21532..22383)
                     /locus_tag="U0290_000524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2300575.1"
                     /translation="MDSIQIGKIKIYWLRGGYTHFDGGAMFGVVPKPLWEKKYPANDK
                     NQLANVTDPMFFQYLGKNYLIDSGLGNRRLTEKQKRNYGVTEESFVLEDLAQLSIAPE
                     DIDFVLMTHLHFDHVLGLTGVSEEGSFYSIFPNAEIWTSKTEWEEMKHPNIRSKATYW
                     QENWQTIAGQIHTFTKEKEFNDAIKMTHTGGHSNGHSVVWIESDGEKAIHMADIFPTF
                     AHQNVLWVTAYDDYPMTSISAKQEIFKQTFGENYWFLSYHDARFRAVQMDGNGKIEAE
                     LKIEQRN"
     gene            complement(22444..23088)
                     /gene="trmB"
                     /locus_tag="U0290_000525"
     CDS             complement(22444..23088)
                     /gene="trmB"
                     /locus_tag="U0290_000525"
                     /EC_number="2.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(46)-N7)-methyltransferase TrmB"
                     /protein_id="HEM2300576.1"
                     /translation="MRVKHKPWAKDRLKEFPAIYIKNPEDFKGQWREVFGNDNPIHIE
                     IGSGKGQFISGMAKANPEINYIGIEMIESVLVSALDKAIEADVSNLRLVARDAKLLEE
                     CFEKGEIAQIYLNFSDPWPKKRHTKRRLTNPTFLTIYERLLPKAGEIHFKTDNRSLFE
                     YSLVAFSEYNMLLTFVSLDLHNSDYEGNIKTEYEEKFSAKGFPIYRLEAKFDRN"
     gene            complement(23095..23877)
                     /locus_tag="U0290_000526"
     CDS             complement(23095..23877)
                     /locus_tag="U0290_000526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEM2300577.1"
                     /translation="MKDNFFGREYDIAPAGGETGQAFVATHEDEKFFLKRNSSPFLAA
                     LSVENIVPKLVWTRRVENGDVITAQKWVNCHILTREEMVGPRVAKLLAKIHHSENLQH
                     MLAKIENCYFSADQLLSLIKVNTKANNELSKEIIAAIRYLEQNLSAAQTNDYVVCHGD
                     VNHNNWIISEENELFLVDWDGAMLADPANDIGMILYQYIPRKDWVSWLSNYGTTLTEE
                     LHRKLKWYTICQTVMQLITEHSNEANERAKQIFQNAIEDDEV"
     gene            complement(24089..25558)
                     /locus_tag="U0290_000527"
     CDS             complement(24089..25558)
                     /locus_tag="U0290_000527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DHA2 family efflux MFS transporter permease
                     subunit"
                     /protein_id="HEM2300578.1"
                     /translation="MNMKAASTSVKRNGILIVMLMGAFVTILNQTLMNVALPSIMKDF
                     GITASQGQWLSTGFMLVNGVMIPMTAFLIERFTTRQLYLFAMITFAIGTAIGGFATDY
                     TMLIAGRMVQAIGAGIVMPLLTVVVLNLFPMERRGRAMGLIGLAMNFAPAIGPTLSGW
                     IVQQYDWRNLFFIIIPFAILDIVVAIFLLKNVGKRTFPKLDILGVIMSTVGFGSLLLG
                     FSNAGDHDWLTWKVAGFIILGLVVLGIFIRYQTSNKAPLLNFRVFKYPTFALTTAISF
                     FVVMGLFGGMLLLPIFLQTVRGFSPLESGLVLLPGALVTAILSPVTGVMFDRFGAKYL
                     SLVGLIIMAGSTFMFTNLDESTTLTFIIIVQTIRSAGMAMVMMPLQTAALNSLPLKLA
                     SHGSAMFNTMRQVAGSIGTAALITVMSKSAASFATKLGPADVIGKTKTDIANHVLIHG
                     IETAFLVAGILSVVACVLALFIQKNRSAMDPIVTKTEKA"
     gene            complement(25555..25995)
                     /locus_tag="U0290_000528"
     CDS             complement(25555..25995)
                     /locus_tag="U0290_000528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2300579.1"
                     /translation="MDEKLVKEVIFSFREVQRKTHHVLAEEAANREITTTQLLAIREL
                     QKESELTLGELAERMKLGKSTVSGIVDRLVKAGFLKRTRNESNRRALSLELTEKGATK
                     AAETYHVFFNRLEPILEIGEERLKEMLEMHREIITILEREGARD"
     gene            complement(26217..27086)
                     /gene="dat"
                     /locus_tag="U0290_000529"
     CDS             complement(26217..27086)
                     /gene="dat"
                     /locus_tag="U0290_000529"
                     /EC_number="2.6.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-amino-acid transaminase"
                     /protein_id="HEM2300580.1"
                     /translation="MKVLVNNHLVEREDATVDIEDRGYQFGDGVYEVVRLYNGKFFTY
                     NEHIDRLYASAAKIDLVIPYSKEELRALLEKLVAENNINTGNVYLQVTRGVQNPRNHV
                     MPDDFPLEGVLTAAAREVPRNEQQFVQGGPVITEEDVRWLRCDIKSLNLLGNILAKNK
                     AHQQNALEAVLHRGEQVTECSASNISIIKDGVLWTHAADNLILNGITRQVIIAVAKKN
                     GIPVKEADFTLTDLREADEVFISSTTIEITPVTHIDGVQVADGKRGPITAKLHQYFVE
                     EIVQACGELEFAK"
     gene            complement(27199..28611)
                     /gene="pepV"
                     /locus_tag="U0290_000530"
     CDS             complement(27199..28611)
                     /gene="pepV"
                     /locus_tag="U0290_000530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase PepV"
                     /protein_id="HEM2300581.1"
                     /translation="MTEINWQKEVESRKDDFLEDLKGLLRIPSVRDDSKKTEDAPFGP
                     DVKRALDYMIELGKKDGFTAKEVGNVAGHLEYGQGEELVGVLGHVDVVPVGDGWTNGP
                     FEPTLRDGKLYARGVADDKGPTIAGYYALKIIKELGLPLSRRVRIIVGSDEESGMSCV
                     ERYFETEEQPTLGFVPDAEFPIIHAEKGISELDVSFKDGEASGEAAFRLLSVESGERY
                     NMVPDHATAILEDVKDFDKVASAFKTFLANHPVEGTLEENGKSVKINIVGKSAHAMEP
                     NNGVNAGLHLVAFLGKFKLTGAANDFVTFGRDYLFGDSRAVKLGISYEDEESGELTMN
                     VGVIRYDVAEGGKYGLNFRYPVTANMDKLKNKMQTVVYEYNAQYTHYEDSKPLFVPKD
                     HPLIQVLQEVYTKQTGEEATLLAIGGGTYARHMETGVAFGALFPGREDTMHQKDEFSY
                     FDDLLKATAIYAEALYKLAK"
     gene            complement(28686..29099)
                     /locus_tag="U0290_000531"
     CDS             complement(28686..29099)
                     /locus_tag="U0290_000531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEM2300582.1"
                     /translation="MKPIYPAVKAVIVKDGKFLALKKKGVEGEVFELPGGRMNYGETH
                     GEALFREVYEETKLQVQPFILYDTWEFFHEDFQISGVIYLVEMPEGGEIELSDEHEEY
                     RFLPLEKESLNVMDIVFSSRMERWDFEAIKGFMRK"
     gene            29204..30034
                     /locus_tag="U0290_000532"
     CDS             29204..30034
                     /locus_tag="U0290_000532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-hydrate dehydratase"
                     /protein_id="HEM2300583.1"
                     /translation="MKKITPKAMCAWIPKREDETHKGDYGRVLIVAGNKQFGGAAIMA
                     AEACVKSGAGLTTVASDSVNRPALQTRIPECMFIDYENISSLSEQISQFDTILIGPGL
                     GLDAYAEEIFRLVLEKSTEQQQVIIDGDGITIYAKGENPHPAAKLTFTPHAGEWERLK
                     VLAPDAVTPTDVALAIDATIVLKGHRTKVYSGESAWQNMYGTPAMATGGMGDTLAGTI
                     CGLMAQTEKPITGTLAAVFLHSYIGEILAKKRYVVLPTEIAEELPTYLKIFSETDEHA
                     "
     gene            complement(30072..30725)
                     /locus_tag="U0290_000533"
     CDS             complement(30072..30725)
                     /locus_tag="U0290_000533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEM2300584.1"
                     /translation="MKKTPFIISGIALLGFIFFMTGVMTGAKWIQHFDDYWNSIIRVG
                     ITNTKTTVISYLTDIGGVATICILTAVIVVIFVVIRKVDMAIWFGGIVLIGGALIPSI
                     IKNIVQRPRPTYKLIEQGGFSFPSGHSTGSTVFYGMLAFLLILYVSRRWLRFTIGILA
                     FGLVIFIMYSRVYLGVHFPSDVVAGFLIGNAALFSGIGCYFIWNQKLALWASRFKKA"
     gene            complement(30735..32348)
                     /locus_tag="U0290_000534"
     CDS             complement(30735..32348)
                     /locus_tag="U0290_000534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM2300585.1"
                     /translation="MGSKLLRGTFILTLGTLISKVLGILYVIPFYAIIGGDEPALLYN
                     FGYVPYQLFLSIATAGIPLAVAKYIAKYNAMEEYAVGRRLFKTGVYLMIFSGIVCFLA
                     MYGLAPTLARMQQLEGGYSLADGIQVIRAVSFALLIIPVMSLLRGFFQGYNSMGPSAV
                     SQVLEQVVRIMFLLAGTFIVMYVLDGNVVTAISIATFSAFVGAFASLLLLLWYFYKRK
                     PGLDRMLLEDRGTVKISIPTLYKDIILSAIPFIIVGSATSLYQLIDQFTLGRVLEYIG
                     ITPELVNSYVAIINFDVQKLIMIPGTLAIAFSMALVPLVTGAYVRKEYAQVKRQLNDV
                     FQILLFLTIPACFGIAMLARPLFTVFFSPSDNGTALLQLFAPIAILFSLFSVSAAVLQ
                     GIDEQRFTVLGLLLGLLAKSVLQMPLIMLFEAKGSIIATGIGYAVSCIFMLLIIKKYV
                     RFSFKVILRRTVLFFGMTALMGLVVIALYIMMSNFVSTDRKIPALMITIVCGGVGAIF
                     YGYMAFKLHLSDKLFGPRGTRLREKLRIR"
     gene            complement(32459..>33910)
                     /locus_tag="U0290_000535"
     CDS             complement(32459..>33910)
                     /locus_tag="U0290_000535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM2300586.1"
                     /translation="NIATAGVPLAVAKYISKYNSLNEYALSQRLYRSSTYLMIFTGIV
                     SFLIMYIFAPILAGMQEVSGGTSIEDITTVIRAVSFALLIIPVMSLLRGYFQGFHSMG
                     PSAVSQVIEQIARIVFLLASTYIVLHLIGGSLVTAMSLATFAAFVGAFFSLICLIWYY
                     RKRKPGIQKMIAGSDNKLRVSTFHLLKEISISAVPFIIVGMAMSLYQQIDLFTFARVL
                     TYDGMDGKTAEDLLSIFNFSVQKIIMIPGTLALAFSMTLVPLVAASFHKGRIREVHHH
                     LTAVFQVLLFLVVPACLGIALLADPLYTIFYGYNADGSMLLQFFAPFAIFFSLFSVTA
                     AILQGIDEQRYTVLSLLLGLLTKSVLQMPLILLLGAKGGALATGLGYIVSVVFTVFII
                     KKYAKYSFKYLFRRLILILGISAVMLLSVWLIYHGLILFLNPHARLTALVIVFVSAGF
                     GAYIYAFLAAKAGLLNYILGDRMYKIRKKLHLI"
BASE COUNT         9970 a         7259 c         5649 g        11032 t
ORIGIN      
        1 ggataaacgg ttaatcttaa aataaatcag caaactcatc tttgacttgt gcagtttccg
       61 ctacattcac agaaatggtt tcaatgttgt ctaatgcttt cgcaattaac gcttcaaaat
      121 ctgtgaaact ttcgtaatgc tcgattttat ctagttttgg ttttgttttt ggagatggtg
      181 gcgtgaaaat ggtacagcaa tcttcaaatg gttgcactga taaattatac gtatcaatct
      241 tttgcgcgat ttgaatgatt tcatttttat ccatggatac gactggacga atgattggtg
      301 tcgctgttac ggcgttaatt gctagcatac tttccaatgt ttggctggca acttgcccta
      361 aactttcgcc attaacaatc gctaaaccgt ttctcctgcg acgaagttca tccgtaattc
      421 gaagcatcat tcgacgagtt acggtcataa tcacactttc aggaatttgt tgtttgatca
      481 cttcctgaat ctctgtaaat ggaacgatgt gcatttgtac ctgtccgctg tatttagcca
      541 attttgcagc taaatcaacc gccttttgtt tcgcttgttc acttgtatac ggtgggctat
      601 gaaaatgaac tgcttcaatt tctacgccac gtttttgggc taaatagcct gcaaccggac
      661 tatcaatacc tcccgaaagc attaacattg cacgacccga tgaacctact ggcagaccag
      721 ctgcaccaag aattgtccgg catgataaaa atacgccttc tttacgcaca tcaatggtta
      781 gttttacatc aggattttta acattgaccg ttaaatcttc catattttgt aatacataag
      841 caccgatttc ttggttgatt tcattagaat caagcggaaa ctcgcggtgg ctacgtcttg
      901 ctgcgacttt aaatgttccg ttctcctcat gcgcatcttg tactaaggca agtgcagcgg
      961 cttttacttc ctctacatct aaattgacgc gtacagctgg actaaaggat tggattccga
     1021 aaatcggttt taaacgttct tctgcgagct gataatctgc cccatttaaa ataatataca
     1081 ttcggtcacg ttctccgtga atacgaactt ccggcaaatc tgtcattgca cgtttgacgt
     1141 tttgcgccaa ctttgtcaca aattgttttc tgttttttcc ttttgtagat aactctccgt
     1201 atctaattaa catacgatca aattccaatt tatttcacca ctttatttag attttcaatg
     1261 atttcttgca gtttttgaat aaaaattttc gcttcagata aacgattttc atacgataag
     1321 ctaacacgta ctgctcctgt tgcttcttcg tccgtcacac ccatcgcttt taacgtgctg
     1381 cttgctagct tctgcttaga agaacacgca ctagtggtgg aaatgtaaat atcttctttt
     1441 tctaaagcat gtactaaaat ttccccacga tgcccttttg ccgaaaaaca aacgatatgc
     1501 ggagccgcga cactttgttt cgtatgaact gtcatatcag acatttgcgc aatttccgtt
     1561 agtaaataat cgcgaatctc gattaatgct tcttttcgtg gctcattttc gagcgttagt
     1621 cgtaatgctt ttgccagcgc aacattccca gctaaatttt ctgttccact gcggtagccc
     1681 atttcctgcc caccaccaag aatttctgaa tgcaaatgca cattttttcg tttaaaaagt
     1741 attccggttc cacgtagagc atgaaattta tgccctgaaa aagtgagcaa atcaatagca
     1801 ttctcattaa gtgcaagtgg tatttttccg ataccttgaa cgaaatctac atgaaagaaa
     1861 gtatgttcaa gcaattttag catttcgcca atttcgtgca gtggttggat gcttcccacc
     1921 tcattgttca cgcccataat agacactaaa atcgtttcat ctgtgagtgc agctttcaat
     1981 gcttccatct tgatgacgcc gtttttatct actggtaaat acgtgacagt aaaaccttcc
     2041 tgctcaagtt cttccattac catacgaaca gaaggatgct cgatgctaga ggtaacaata
     2101 tgtttcccgc gattttggta actataaacg agccctttaa tcgccaaatt attcccctct
     2161 gtgccaccag atgtaaaaat aatttcttct ggcaaagcgc tcaccatcgc agcgatttgt
     2221 tttcttgatg catcaagcag ctctttcgac ttagcaccaa aacgatgcag cgaagaagga
     2281 ttagcaaaat aattactcgc tacctttgta tatgtttcaa gtacggccgc atttggcttt
     2341 gttgtcgcac tattatcgaa ataaatcata aaaactaaat tctcctcccc aatattccac
     2401 tctccatttt atcataattc caacactttc caactactat tttcataaaa aaacaggatt
     2461 cctattataa aaatagaaat acctgttttt acgtttttat tcaatatcgt cgacgcttac
     2521 ttttgattca tacgcttttt cgactttttt aaatgctcct gtttccactt tttccagcgc
     2581 ggttacagca atttctaatg cttttttata ctgataatca ttgtagaaat ggttttctgc
     2641 ttgaacgagt tcatctgcaa gttctttgtt acgcaatcga tagcggttag catattggat
     2701 aacatgctca actaagcgaa cattctccat catttcctcg gctttttcag ttaaatgagt
     2761 taaatcttct tctgcaatac gccaatcttg gcttactgct ttcatattta gcggtttctc
     2821 ttccaaacgt ttctcaagcg cattaatgga ttcccccata tgctctcgta gcgataaata
     2881 ctcttctgga agacctggca aacgttctcg ttccattttg cgatctagtg taataattgc
     2941 acgacgcatc cgttcagcat catcacgcgc ttctagttca tctttacgca aagaacgcaa
     3001 ttcttcagcg aatttgtcct gctcagcgct aatcgtaata agcgctgcat caatttcttt
     3061 caatgtatct tgcgctgccg agtaggcaat ctcaccacta gcaattagag cagttaattg
     3121 ttcaaagttt tcttttgctt cactcaattt agcgctcgtt tttaaataaa ccgctagatc
     3181 atcttcagca acatgatagg tttgttttac ttctgtaatt tgttcagcaa gtgcatctga
     3241 aacggcattt tggcgttgta acttgtcaga agttgggcta tgattttctt tcacgaaatg
     3301 gcgagcttct gcttcgtgtt caagcgtatc ataaaacaaa tcgatttcat tatgtaattc
     3361 ttctactcct tgttccgctt catctaaatc aagattaatt acattttttt tcattttatc
     3421 aatttgattt ttcatgcgag aaatctcttt atctaactcc atttgagcta aataataacc
     3481 ttttcgcacc atttcttcat agccagcgcg aagtttagtc atttcttctg gcaaaatggt
     3541 atctgtttca tgcagtaatg acgggattcg ctccatttgc gcttcgatta cttgcatttc
     3601 tttttgaacc actataacga tttctcgtgc ctctaaatga tcaccttggt cagttaatga
     3661 atcatagcta tttaagcttt ctgacagttc acttagtttt gtctcaatat atggtaacgt
     3721 ttctccaagt ttaaatcctc ttgtcaaaac ttctcggcgc aactccgcaa atttttcttt
     3781 cgtggcacga ctttctttgg catttttttc ttcactaata agtagctctt ttagtccacc
     3841 aagaatttga tccatttgct tttcaattac aacgagcatt tgctcaatat cattttcagc
     3901 gtgtgtagca gaacggaact tgtaacggtc cgtgttcatc tctgcttcta ataacacttc
     3961 ttctaaatca ggaaataatc tagtttcaat ttcatcccag gacgaacgcc atgattcaaa
     4021 aagcgcttct gtctgacctg ttagttttaa ttttttcact tttgaaagtt catcaataac
     4081 cggccgctct ctgagtttaa tctttttctc ttctaactcg tttattcttt ggtaatgttt
     4141 tctttttaat atgtagcctg caccaatgac tgcaataact acgataataa agccgattaa
     4201 catgtagtac atccaaaatc ctcccatcaa cgttaacttg tgaaagaaaa acagccacac
     4261 tcgtgctgct catacatctt ttcaattatg tacatctttc catatgtagt atattttatt
     4321 cctcattttc agttcattat acacatcttt tattttacca cgatttgcct agaattactt
     4381 gcgtttaacg aaaaaatttt taaagcaaat aaaatctatt ctattacaaa acaaatttcc
     4441 cgaaatccct tgtcgttcat gctatactaa agacattatt tgaaaagaaa tgtggggata
     4501 aaaaaatgat tgaaatcaaa aaaatgaccg gaacaaaaga agaaaattat gcacttgctt
     4561 taaaacaagt acaagcaatg attgctggcg aaccaaatct aattgcgaat ctaagtaatg
     4621 tttcttctat attaaatcaa gcactttctg atattaattg ggttggattt tatttacttg
     4681 aaaaagaaac aaatcaatta gtactcggcc ccttccaagg tttgcctgct tgcattcgca
     4741 ttccactagg taaaggtgtg tgcggttctg ctgcctcaga tcaaaaaacg tatataatcg
     4801 aaaatgtgca tgatttccct ggacatatcg cctgtgatgc agcttctaat tcagaaatcg
     4861 ttctaccaat tgtaaaaaat aatcaactgc ttggcgtgct tgatattgat agtccccttt
     4921 ttaatcgttt tgatgaagtg gaccagttat ggctagaaaa aatccgtgat gcgattactc
     4981 aagaaataaa ttgacaagct actagtaact atactatact ggaagatgtg taaaatgcag
     5041 cttgagtaaa atgaatgagt gtgttgttta cccccagatg taattctgtg gtatatcacg
     5101 taaccggcgg ctgctatggt gatggtatat gaaggtaaac tgccctgatt tggttttacg
     5161 tcacgtttgt tttataccaa aaacaaataa aaggaggagt ctcttatggc tcgttataca
     5221 ggtccaagct ggaaagtttc ccgtcgttta ggaatttcac tttctggaac aggtaaagaa
     5281 ttagagcgtc gtccgtatgc tccaggtcaa cacggcccaa ctcaacgtaa aaaaatctca
     5341 gaatatggtt tgcaacaagc tgaaaagcaa aaattgcgtc atatgtatgg attaactgaa
     5401 cgtcaattca aaaacacgtt caacaaagct ggtaaattac aaggtaaaca tggtgagaac
     5461 ttcatgatct tactagaaca acgccttgat aacatcgttt accgtcttgg tcttgctcgc
     5521 actcgtcgtg cagctcgtca actcgtaaac catggccaca tcactgtaga tggcaaacgc
     5581 gtagatatcc cttcttacca agtatctgtt ggtcaagtga tctctgttcg tgaaaaatct
     5641 gctaaaaact ctgcaatcgc tgaaagctta gaagtttcaa gcttcgtgcc tgaatacgta
     5701 actttcgatg cagaaaaact aactggttct cttaaccgtc taccagaacg ttctgaactt
     5761 gctgctgaaa tcaacgaagc atttatcgta gaattctaca gccgttaatt agagctaaaa
     5821 accttacaat gcatgacttc ggttgtgttt gtaaggtttt tttatgcaca aaaaagcact
     5881 cgtctttaaa aacgagtgct ttccctatta tttataagaa actaagaagt attttttctt
     5941 cccgcgtctc acaattgtaa atttattttc aatccggtca cttgcatcca tgattttttc
     6001 taaatcttgc tgacgttccc cattaatgta aatagctcca tttgcaacat cttcacgcgc
     6061 ttgacgtttg gaaggttcga taccaagtgt tactaaccaa tctaccaagt ttgcttccgt
     6121 atcttctgca acaaatgtcg gaacgtcttt gaagccttgt tcaatttcat ccgcagtcag
     6181 cgcttttaca tcaccactaa atagtgcttt tgaaatttta agtgcttgtt ccaacgcttc
     6241 ttcactatgc acaaatttgg tcatttctgc cgctaacgtt ttttgtgcag ctcgtaaatg
     6301 cggttctgtt tctacttgtt ttgctaactc atcaatttct gcttctgtta ggaatgtaaa
     6361 gtacttcagg tatttcacaa catcacgatc atctgtgtta atccagaatt gataaaactc
     6421 atatggcgtt gttttttctg gatttaacca aattgccccg ccttctgatt tcccaaattt
     6481 cgttccatca gcttttgtta aaagaggaat tgttaaaccg aaagctttgg cattttcgcc
     6541 ttgtttttta cgaatcaaat caagtccagc agtaatattc ccccactggt cactaccacc
     6601 aatttgcaaa cggcaatcat taaattcata taagtgatta aagtccatcg cttgtaaaat
     6661 ttggtaagcg aactccgtga atgaaatccc tacttctaaa cgactagcaa cgatatcttt
     6721 tgaaagcatc gtgttcacgt tgaattcttt tccatagtca cgcaagaaat caaggatact
     6781 cacatctttt gtccaatcat agttgttcac catgctcgcc gcagaattac cttcaaaatc
     6841 aaaaatcttt ccaagttgca cgcgcaaact ttccacattt ttactaattt gttccattga
     6901 ttgtaactta cgctcttcct ttttaccact cggatcgcca atagttcctg tcgctccacc
     6961 aactaaaata atcggacggt gcccagcgtt ttggaaacgg cgtaaaatca tgaatggaat
     7021 taaatgacca atatgcatcg agtctccaga tggatcaatc ccgcagtaca aagaaatctg
     7081 tttttcttct acccatttgc gtaatccttc ttcatctgtt tgctggtaaa tagctccgcg
     7141 ccactctaat tcatcaataa tattcatttt catcattctc cttttatttt tggacataaa
     7201 aaacgcccct ccgctaaaca gtttagcgaa gggacgtatt aattaacgtg gtaccaccct
     7261 acttttagga ataaatccta cttcaaaaaa taacggctca acaccggctg cgccattatc
     7321 ctgcgcagcg tgactccggg atgtaattcg tctacttacc tctactagtt tccaccaacc
     7381 actagctctc taggaataag aataagcaac tacttcgtcc gttcatagtc attttcgtta
     7441 tgaaaagtat acatacattt ataacatacc gttaaaaatg ctgtcaactt attttttttc
     7501 tttagtcgta ccacgtagtt tttcactatg tggtaagata actgtttttt catctacttc
     7561 ttcactcgtc atcaactttg ttagtagacg catagccacg gcgccgatat cgtataaagg
     7621 ttgtacgatt gtcgaaagtt gcgggcgtga cattaatgtt aatttcgtat tgttgcttgt
     7681 cattacttct aagtcttctg ggactttgat tccagcatca agcgcggcat tcaaaatacc
     7741 aatagctagt tcatcatctg caactaccac tgcatttggt tttttagaca aggcacttaa
     7801 ttctgcccaa acttttacac ctgcattgta gttatatttc gcttcaataa tgtagtcttc
     7861 ttgataagaa attccagctt cttctaatgc ttctttgtaa ccagctaatt tcatttcgcg
     7921 attgaccggc tcgtttagag aaccacttac aaaagcgatt tgcttatgac cattatctac
     7981 aaaacgtttc accgcttctt ttgttgcttg tttgtaatcg atgtttacag aagcaaattt
     8041 attttccata tcaacggctc ctgctaaaac tactggcgct ggagaacggt caaattcttc
     8101 ttgtaattgt tctgaaatac gttcgcccat gtaaataatt ccgtccactt gtttaccaag
     8161 aagcgtgtta agtacttgaa gttctttatc ctcattttcg tccgaattgc tgaggataat
     8221 gttgtattta tacattgtcg caatatcttc aatcccacga gcaagctctg cataaaacac
     8281 gttagaaata tctggaataa taacaccaac tgtagttgta cgtttgctcg ctaggcctct
     8341 agctacagca ttaggacgat accctaattg attaataaca tctagtactt tttttcttgt
     8401 tactggttta acattcggat tgccgttcac tacccgagat accgttgcca tagaaacatt
     8461 cgcttctctt gcaacatcat aaattgttac attcatctct attcactctc catattcatt
     8521 attttaatgg ctctacctac cattgtaaac gtaaacaaac tagccttcct ttaataatac
     8581 gataactttt ttcgatatgc aattgttttt actctttatt ttcatttatt ttcatatcaa
     8641 aacggcatta ttacacaaaa ttaaatgccg atagaatatg agttgttaat agcaaaacaa
     8701 aaaaccttgg aatcccaagg ttttttgatg ttactttatt ttatgtggta ctaaattact
     8761 tgctaaaatt gcattccaga attcttcaaa ttcaggaata tccatttgtt gtgcagaatc
     8821 cgataatgca actgcaggat ctggatgaac ttcagccatc acgccatctg cctcgatagc
     8881 tagagcagct tttgcgcatg gaagtaataa atcttttcga ccagtagaat gcgtcacatc
     8941 aaccataact ggtaaatgag tttctttttt caaaattgga acggcagaaa tatcaagtgt
     9001 atttcttgtc gctttttcat atgtgcggat acctcgttcg cataagatga ttttgccatt
     9061 tccttgtgac atgatatatt cagcagcacc aatgaattct tcgattgtag cagataaacc
     9121 acgttttagt aaaatgggtt tgtccacacg gccagccgct tttagtaatt cgaagttttg
     9181 catgtttctt gcaccaattt gaataacatc tacataatca agtgcaactt caatatcagc
     9241 cggcgtaacg atttcactaa taacacctaa accgtattca tcagatacac gttttaaaat
     9301 tttcagtcct tctaaaccta atccttggaa gtcatatggg ctagtacgag gtttaaatgc
     9361 gccgccacga ataagtttta agcctttcgc tttaatggat tcagcgaccg cagcaacctg
     9421 ttcataagat tccactgaac atggaccgaa aacaaatact ggttcgccat tcccgattgg
     9481 caatcctttt actgtaacta tcgtatcttc ttttttgttt tttctagaaa cgagtaatgc
     9541 tttagagtga tcttcttctt gaagctctaa tcccgcttta aaaatttctt taaataattt
     9601 ttgaaccgta ctatcttcaa aaggtccttc atttgctgca agaatcgtgt taagcatttc
     9661 tctttcacgt aatggatcaa aacgaagaga accttgagtt cctttaattt tgccaatttc
     9721 ttgtaccaaa ttagcgcgtt tgctaattaa ttctagcaaa tcaatattta attgatccac
     9781 ctgtgttcta agttcctcta aatttgtatt aaccatttaa cttccaccct tctaaaaatc
     9841 tgctccaaga ttatttctca ttatagagga aaacagataa tttgtcacga atccactttt
     9901 atacttaatc gcttttaagc attaaagtga ataatgtaaa actaatgtta acatgtttta
     9961 aatcaaatta caagcagata atgtattttt tcctaataaa aaaacagccc cgtaaggctg
    10021 ttttttgaac taagtttatt ttacttcttt ttttacgtca gaagcaattt ttttcgcttc
    10081 gtctttgcct tcatctactg ctttttttgc ttcttttttc gctttgtcag ctgctttttc
    10141 tacatcgtcc gcagcgtctt ttgcttcatt tttcacagcg tctgccgctt gtttcgcagc
    10201 ttcttggttt tcttctttgt tttgtgaaac aacttctttc acggctttgc tttgtttaga
    10261 aacagtatct gctaatttac cggatttgtc tttcactaca tctacaaatc caccagcaga
    10321 atcaactaat ttatcttttg ttcctttggc tacaccactg atttcgatac ctttttcata
    10381 agcaacatct ttccattggt tgcctttttc tttaattgta tcaacttgtg tatttaagtc
    10441 ctcgcgtagt tctttacctg atttaggtgc aaatagaagt gctgcggctg aaccaacgat
    10501 tgcaccaatt aaaccaccga ttagaaaatc ttttgtatta ataccatctt tttctgccat
    10561 gttaaatccc tccaaattat attagaaatt agattgttct gctgcttctt ttgctgcttc
    10621 tttcgctgct ttatttgctt tcatcttttc tctaaaagaa agaattgaat tgctaattga
    10681 gacagcttga gaaatcttcg cttcgttttg ctctactttg tttgttgcga gtgttgctag
    10741 ttcgcgaaca gattgactta atcctagtaa agaagtccca atgtcaccaa ctgcatcaaa
    10801 aactggatcc actttcgcaa ctttgccatt tacatcttct agaagtgtat tggtcttatc
    10861 aagcaatttt tgtgattgtc ctgtaatccc ttgtacttct actgttattt tttctaacga
    10921 tttagctacc tcatccattg tttgggaagt tgattttaac gtttttccca agtagatggc
    10981 aataactaaa agcgcaattg cggcaataag cgctgcaata tacaagatta ctatcatcta
    11041 tccacacctc catattcctt tttctatacc ctgagtattc ccctctaaaa ctttcttctc
    11101 taatgatcta tgtacaaaat acaaaaaaga aaaggtatta gcttcatttt agcaagtaac
    11161 tgccgaaaaa taaactaata agaaagaaac cggttaattt gttgtagaag gttgctttta
    11221 gcgtaatttg gagtaaaata gatacaggct gctttttgcc tatttttagt taaaatttag
    11281 ggaggttaca agatgagaga cgcaagaatc gaaaaattag cacataattt gattaactat
    11341 tccgtcaaac ttggcgctgg agaaaaagta ttaattgaaa acttcggtgt tcaaaaagaa
    11401 ttagtgatgg ctttagtaga agaagcatac aaagctggcg gtttcccgtt cgtttcctta
    11461 aaagaaccac aaattgaccg cgcgatgatg ctcggagctg atagttccca atatgcaaaa
    11521 attgctgaat tcgaaggcaa cgtgatgaaa gaaatggatg cttacatagg tttacgtgct
    11581 ggcgataaca tcaatgaaac atccgatgtc ccagcagata aattgaaaat ccacggagaa
    11641 acagttggca aaatgcattc tgatattcgt gtgaaacaaa caaaatgggt tgtacttcgc
    11701 tatccaagtt cctccatggc gcaacttgcc aaaatgagca ctgctggttt tgaagatttc
    11761 tactttgacg tgtgtaactt agattacgga aaaatgagtg acgcaatgga tggattagta
    11821 gaactaatga ataaaacaga taaagtacac ttagttggac caggaacaga tttaacattt
    11881 agtattaaag atattccggc aattaaatgt gctggcgaaa tgaatatccc cgacggtgaa
    11941 gtatttactg caccagttcg tgattctatc aatggaacac ttacttataa cacaccatct
    12001 ccttaccaag gctttacgtt cgaaaatgta tctttcacgt ttaaggatgg aaaaatcatc
    12061 gaagcgactg cgaatgatac agctcgtatt aacaaagtct tagatacaga tgaaggcgcg
    12121 cgcttcgttg gcgaattcgc tattggggtt aacccattca ttcacgaacc aatgcaagat
    12181 attctttttg atgaaaaaat cgaaggaagt ttccacttta cgcctggtca atgttacgac
    12241 gaagctttta atggcaacca atctgctatt cactgggatt tagttaacat tcaacgtgcc
    12301 gattacggcg gcggcgaaat ttactttgat gaagttctca ttcgtaaaga tggtattttc
    12361 gtccttccag aattagaagc acttaatcca gaaaacttag tataaaaaaa agacgcttag
    12421 gattaattcc taagcgtttt ttagtttaaa caattgtttt ttcaccgggt tgccagttga
    12481 ttgggcacag tccacctgtt tgaagagctt gtaaaactct taaaacttca tccacttccc
    12541 gcccgatatt attatggtgc accacttcgt actggatttc accttttgga ttgataatga
    12601 aaagaccgcg caatgctacg ccttcttcct caattaatac accgtaatca ctagctactt
    12661 gatgattcgt atccgcagcg agtgggtagt ttaatctacc aataccacct tctttaatcg
    12721 gtgtattcgt ccatgcaaga tgcgagtgaa ttgtatctgt agaagcgcca attatgcggg
    12781 catttaatgc atcaaattca tctgaccgag cggaaatagc aacaatttct gtcggacaaa
    12841 caaatgtaaa gtccattgga tagaaaaaga gaatcgtcca tttatcgtct tctatatttt
    12901 tttctagact tactttccca aaagtctgat ttggcataac agcttccatt tcaaatcttg
    12961 gagcttgtgt gcctactaaa cgttctgcca cttttatccc tccattaatt atgtagttgt
    13021 attttgtatc acatgatata ttttaataca cctaagaaat actgtaaagc tttatttata
    13081 ctaattacaa acaagaaaaa agcacgccaa cgaatcggca tgctttattt agttattaat
    13141 taatcgcgct ttttttcaag tcagcttctg tcaaaacttc atgatcaagt actttttcat
    13201 aagcggcttg gaatttttga acgtcccctg ctcccatgaa taaaataaca gcttctgggt
    13261 atttcaaaag ttcttctgta tgctcttctt tgataatgtg gtttcctttt gttttgtgcg
    13321 ctaaatcagc aatcgttaaa ttccctgttt tttcacgcgc ggaaccaaag atatcacaaa
    13381 gatacacttc atccgctaaa ttcaagctgt ccgcaaaacc ttgtaagaat gtgcgagttc
    13441 gcgtgaatgt atgcggctga aaaacagcaa ctactttttt gtcaggatat ttttgtctag
    13501 cagcatttac tgtagcacgg atttctgatg gatggtgcgc gtaatcatct actaatactt
    13561 gattagcttt ttctgtaata ctaaatcttc ttttgacacc ttcgaaagtt tttaattcct
    13621 ttttcacgtc ttccactggt agaccttcat aatcacaaag tgcaataaca cttaaggcat
    13681 ttaatacatt atggtctccg taagttggaa tttcaaacga acctaagaac tcgccgcgat
    13741 gatacacgtc gaattttgtt ccagttgttt ctttgattac atttttagct tggaattcgt
    13801 tttcctcgcc aaaaccaaag taaataatcg gtatatctaa agtaagctta cgtaattcag
    13861 catcgtcccc taaggcaaat acagcttttt tcacttgttt acccagtgtt tcgaatgcgt
    13921 taaatacatc atccacgctc ttgaaatagt ctggatgatc ccaatcaata ttcgtcataa
    13981 ttgcatacgt aggtttataa gcaaggaaat gacgttgata ttcacacgct tcaagtgcaa
    14041 aatattccgc tccttttgtc ccgcttccag taccatcacc gattaaataa gaagttggac
    14101 gaatcgcacc aacaacatgc gaaagtaaac cagttgtcga cgttttacca tgagaaccag
    14161 ttatcgcaat acttgtatag ccatcaatta attgacctaa aaatttatga tatcgaatca
    14221 ccggaagccc aagctccagt gcacgctcaa tttcttcatg tgtatctggg aatgcattcc
    14281 cagcaataat tgttaggcct tcttgaatat tatcagccga aaaagtcata atcggaattt
    14341 gcttttcttc taatgctttt tgtgtaaaga aatatttatc cacatcgctg ccttgcactt
    14401 ggaaaccttt atcatgcagg atttgagcaa gtgcactcat ccctgaccct tttattccaa
    14461 caaaatgata gatagtcatt atttgaaccc ccattaattt atcttgaaga gggtgcctaa
    14521 aaaaaacatg ttaactgtta agcaccaagt cttaactttg aaaacagtat aaagtctccg
    14581 ttttctagac atcatcttac gttctaattg tgttttatgt ttgaattcta gttgagtcaa
    14641 taattcacca gcttattata tcactttcca tgtaaataga aaaatctttc agcgaatata
    14701 agcgaaatta ctcatgaaaa tagccattat ttgtaaaact aattaagtaa tatgttagtt
    14761 tagtactaca aaattaagat tctttgtttc gcaacttagc taattggtcc tttgtaataa
    14821 taacatctcg cggtttggaa ccatttatcc cagaaacaat ttgatgattt tcaagggatt
    14881 ccattaatct cgccgctcgg ttataaccaa ttctaaaatg tctttgcaac aaggatgttg
    14941 aggcagcatt ttggcttaaa acaaagtcac acgcttcttc aaataattca tcggtatttt
    15001 cttttgccgt ttcttttaca agtaattctt gttcttcaaa gatataatcg gcctcgcctt
    15061 gactccgaac atgagcaaca actgcatcaa tctcttcatc actaacgaag gttccttgta
    15121 aacgcactgg cttacttgca ccacttggta agaagagcat gtcccctttt ccgagtaatt
    15181 tttctgctcc gcttgcatct aaaatcgttc tagagtcgat ttgagaagat acagagaacg
    15241 aaacacgtgt agggatattc gccttaatga gacctgtaat aacgtctaca gatgggcgct
    15301 gtgtcgctac aatcatatga atgccacaag ctcttgcttt ttgtgcgatg cggctaatgg
    15361 attcttctac atcatttggc gcaaccatca tcaaatcagc taattcatca atcacaatta
    15421 aaatataagg taatttctcc cctatatgat ctgggtgact agcgtattca ttatattttt
    15481 ccatattcct aacgcctgta tggctaaata attgatagcg acgttccatt tcttctaccg
    15541 cccattttaa agcgacagta gctgctttgg catccgtaat aactggactc acaagatgtg
    15601 gtatccggtt gtacggagct aattcgacca tcttagggtc aatcaaaagt agtttcaatt
    15661 ggtctggcgt tgctttgtaa agtaaactta ctagcaatga attgatacaa acacttttcc
    15721 ctgaccctgt agctccagcg attaaaccgt ggggcatttt ttgtaaatca gtaataattg
    15781 gcgttcccga gatatctagc ccgagtgccg ctgtgagcgg tgatgtagat gactgaaaag
    15841 cttccgtatt catcaattca gaaagcatta cgggacgact tgtctgattc ggaatttcta
    15901 tccctactgt actcttacca ggtatcggcg cctcaatccg tatatctttc gctgctaaat
    15961 ttaatttaat atcatccgtt aaattagtga ttttgctaac tttaacgcct ttttcaggtt
    16021 gcacttcaaa tctagttact gctggacctt gtgtacggtt aactacacta gcttgtacgt
    16081 tgaaattttc caaggtttca tctagcatct cttgctgcat ttgtagccat gagtcgtctt
    16141 ctcgtttgga gactggcgga tggagcaaac taaacgacgg aaattcatag ttcgttgggt
    16201 aagagactgt cgctacttgc gcttctcgaa cagtattcgt ttgttctgct tctacctcaa
    16261 ctggttgttg cccatttatt tcctgtgctt cttcttttcg aagtgcttgt ttgtctttct
    16321 ttaccatcat gacattaaat ggaattctgc tttttagcaa ttgttcttgt ctatttgatt
    16381 ctacttgttt gcttctagta gttgttttcg tttgcgccgg ctcttccgtt ataagggaaa
    16441 cgcgtgctgg ttcttgctgt tctactggtt ctggggttac tttcacttct ggttgctccg
    16501 taatgacttc ttccgtcact ggcactgaca caatctcttc ttctatttga cgatttagct
    16561 ctgtgtcaaa agcaattgtt tccgcttctg ctgaatctaa taaatctact ggagtaatag
    16621 ttaaatcttc ttgtattgta ctaagttctt ctgcttctgt tacagcaaac tcaaatttac
    16681 ttggtcgttt attaaaggca taaacaggcg aaggtacatc cgtcgctgta aaaggtcgtt
    16741 ttcttgtttc ctcttttact ggttgcgttt ctgccgcttg tctttttgtt attggttgtt
    16801 tttttggttg aattggttgg cttttttgtt tatctggaat taacggaaaa cgaaattcgc
    16861 cttttggata ctggtatacc atttgcgttt tcatttgtcg tttcactggt tgcatatgtt
    16921 tttgttttgg aactgttttg taagcaactg gtcgttcgtt ccttatagta cgttctttcg
    16981 ttttaattgc tgttacattt gattttggca ctacttctgg tgctcgttgt tttgctttct
    17041 tttctacttt tcgtgaagac gtatcttcgt atgtatctat ttcttcatcc atatcgccaa
    17101 agaaaaaatc tttaaaccat cccattcatt atcaccctaa atttaatttt cttgtttgat
    17161 tttaacagac aaaaacaaaa taatctatga caaaattgtg aattcgcctt ttttcgagcc
    17221 atattcgtta taataccttg gtaatagagg gttcaaacgt ggtataagtt tttgttataa
    17281 aggtaaaatt gattcatttt tgtgcgattt atgcatattt tgtatacaat taacatttta
    17341 tcgttctaca tttaaggcgt tttcacaata tctaataaat agcaactaaa aaagcgcccg
    17401 atatagcatc agacgctcaa aattaaacat ttatttagaa attaacagga aaagcttctc
    17461 caaccacagc cgattcctcc agaaccataa tccccttttc cgtaggcgca tcaggaatcg
    17521 caagttcacg cgcagcacat accatgccga aagaatcttc tcctcgcaaa ttagatggtt
    17581 tgataattaa accacttggc ataaccgcac cgatttttgc aacaactact ttttgaccag
    17641 cgtcaatgtt cggggcaccg catacaattt gcaatacttc atcccctaca ttgattttac
    17701 atacatttaa tttatctgca ttaggatgtt tttctttcga ttccacataa ccgacgacga
    17761 atttaggaga taaatcagcc acgatttccg gttcgaatcc agctttttca attacttgat
    17821 tcatttgcgc tactaattcc tccgtcaaat ccaccttacc atttgcagta atattaaaat
    17881 agttggagct attaaagatg ttatatcccg ccaactcttt tgtttcacga tcaaaaattc
    17941 gcgctacatc accgcggcgt tcccattcac gattttcaaa cgttacttcg cctgtttcaa
    18001 ttagtagagt gtcccctacc ccttctttgt tataaaatgc gtttactatc acgttttcta
    18061 ctcctttaat ctgttttttg ccattataaa tatcggttca agtttaccat tattatagac
    18121 aaatggcaaa gaggtaattg gtacaagccc atccgcaaaa aagtccatcg tcatatgagc
    18181 cagaacatcg taacctgtat tatcttggat atccccgata attaaaacgt cttgatgcgg
    18241 tacggcaagc accatttccc ccgttaactt ctcgcgcatt tcgcgaagga acgcttcatt
    18301 caacaatcta ctagcatcgt aaccatcatt tgtgcgaacg aaataaaagt cattaccatt
    18361 aacagaatct ttttttagcg ggatttctag attcgctaaa ttattaaaag caacttctct
    18421 tatttcttta tgcgttagtt gtgctttttt aagcatactc tcttcaataa aacgatagga
    18481 tttccccaaa tcaaccgcgt agaaaatttt cgtttcagcc gtatgatcat ccgttaacag
    18541 cgcttctcca gcttttgttt catcaggaaa agaagttgca cgtacaaccg gatagatgct
    18601 cgccttatta ttttccagct caacatttcc cgccgctgcc cgaaaaccct cttccacata
    18661 ataaacaatt ttttccaccg ctgcattacc atcattttca aagttcgcaa tgatttgcgg
    18721 gatggtcaga gttacttttt taccattttg cgcaaccgtt agcgtgtcat tgtctcgatt
    18781 atatgaaaac tgccgattcg gcgcttgtaa ttctttttca agtttttctt tcatttttaa
    18841 tgtagtcatt tttgccataa gtgcctcccc ttccataaaa agcagtcact ttttatatcg
    18901 cagctagaaa atcattaatt tcttcttttg tttttctatc tttacttaca aaacgcccca
    18961 cttcttcacc gtcttcaaac gccaaaaagc tcggaatacc aaaaatcgct aaatcagcac
    19021 ataaatcaat aaattcatct cgatcaacat ggtaaaagac aaagtcctca ttttccgctt
    19081 cgatttcagg cattactggt tcgatgaatt tgcagtcgcc acaccaatca gcactaaaca
    19141 taaaaacgga tttgccttcc gatttaatag cgtcaaattg ttctactgat tctaatttct
    19201 tcatttccat acgctccttc taatctcata ctagttaaat cctaccgcct aacaaaactt
    19261 tcgtccagaa taacgctcat gaaaaaagtc caaccccaac gaaggagcca aacttttttt
    19321 accgtacttt agagcgcgct tttttctttt ctaaaaaatc gtggaaatac ccgaaaaata
    19381 atgtcacgat cccagcaatc atagtggtcc atatccaacc aagctctgaa tcacgaaaat
    19441 aaggcaggtc cgtaacatag cctagcaaga atactaaact cgccaccaaa aggaacaacc
    19501 ccacaacaat tactggtttc tttattattt cacgcattgt ttttaattgt ttcgtaggtc
    19561 gttttatcca aactgcgaat aagcgttgta atcatttctt ttgcagcagc atagtcatcc
    19621 acatgtaaaa tcgagttaga cgagtgaatg tatctagctg gaacaccaat tactgcactc
    19681 ggaatcccgc taagcgatgt atgcactttc ccagcatccg ttcctcctgg cgaaacaaaa
    19741 tattgataag gaattttatt tgtttccgca gtatctaata aaaattcacg catacctcga
    19801 tgcataatca tcgtccggtc aaaaatacgc agtaagaaac cttgaccaat ttgaccgaat
    19861 tgcgatttat tcccagtcgt atcatttgca gggctagcat ctaacgcgaa gaataaatct
    19921 ggtttaatca tgttcgcact tacgcccgca ccgcgcagac cgacttcttc ttgcacattc
    19981 gccccagcaa aaagtgtatt tggcaacgat tcgcctttca attctttcat aagttcaatc
    20041 gcaagaccaa cgccataacg attatcccat gctttcgcta aaattttctt tggattcgca
    20101 agcggcgtga attcagccac aggaacaatg aattgccctg gtttgatacc aattttctcc
    20161 gcgtccgctt tatcatccgc accaatatca attagtaagt ttttaggatc cgttggtttg
    20221 ctacgttcag cctccgacaa caaatgcggt ggaacagaag caactacccc aataaccgga
    20281 ccgttaggcg ccataatttg cactcgctgt gcctgtaaaa cttgcggatt ccaaccacca
    20341 attgtttgaa aacgtattag accattttct gtaattcgcg ttaccataaa gccaacttca
    20401 tccatatgag ccgcaacaag gacgcgtgga ccaccttccg ctccgtggcg cacaccaaaa
    20461 ataccaccta agccgtcttg gataatttca tcggaaaccg gttcaagttc ttttcgcata
    20521 aaagcacgaa ttctatgttc atcacccgaa gtcccttgaa gttccgttaa ttctttaaac
    20581 atcgctaacg tttctttttc cattaataat catctctttc cgtctaaaat ctcttttatt
    20641 atagcaaata atatccgttt ccgctcgctt cacttctctc ttttacagaa agcgtgttca
    20701 aaaatccttt tataatcaaa aatttgtagt ataatgatta aaagagatgt ttgtagtagc
    20761 atcttttaaa aagaatagga aacactaggg aggaaaagcg atgaactgga aagctttcat
    20821 tgcaggcgtt ggagcaggag cagcggctgg acaccttgtt tatcattatt tacttagcga
    20881 taaaacaatt tctggggacg tcatcttaga aaaggtaaaa gatgcattca agcaagaagg
    20941 accaatcgaa ggttcttgga ttcaacttaa aaaacaacat tacaaaaaat tcgcgattga
    21001 tactttcgtt taccacggcg gaatcacttg tattcgcgaa ggcgagaaga agcaattcga
    21061 atttatcgca gacgctaaca caggaacaat catcgacgta tatttagctt aaaaaataaa
    21121 aacgattccc caagtgggga gtcgtttttt agcggataaa actatctatt ttctttttaa
    21181 ttaccacttc atctgtttca ccttgttcaa ttaactcctt catttgttct gtgtagatta
    21241 attttgcggc agcatccatc gcttttttca ccgctgctat ttgttgcata atagtttcta
    21301 aatcacgctc ttcttctgtc atcgttttta tagaacgtac atgtccttct atcttagcga
    21361 atcgcgttac cagcgctttc ttttgctcga tttccatata taccccctta tagtatacca
    21421 cacgacaacc ccctacccag gatatcatat tggctatttt aaagcgttta taaatacaat
    21481 tataacacaa aataaaaata ccctcaaaaa aaagaagtga cttctcactt cttaatttcg
    21541 ctgttctatt tttaattcgg cttctatttt tccatttccg tccatttgaa ctgctcgaaa
    21601 tctggcgtca tggtatgata aaaaccaata attttcacca aaagtttgtt taaaaatttc
    21661 ttgtttggca gagatagaag tcattggata atcatcataa gcagtgaccc aaagcacatt
    21721 ttgatgcgca aatgtcggga aaatatccgc catatgtatc gctttttctc cgtccgattc
    21781 tatccataca actgaatgcc cattactatg tccacctgtg tgcgtcattt taatcgcatc
    21841 gttgaattct ttttctttgg taaatgtatg aatttgtcct gctatcgttt gccagttttc
    21901 ttgccagtat gttgcttttg aacgaatgtt tgggtgtttc atttcctccc attccgtttt
    21961 ggaagtccag atttccgcat tgggaaagat ggaataaaaa ctcccctctt ccgaaacacc
    22021 ggtcaggcct aacacatgat cgaagtgcaa atgcgtcatc aaaacaaaat caatgtcttc
    22081 tggagcgata gataattgcg ccaaatcttc cagtacaaac gattcttccg tcacaccgta
    22141 attccgtttt tgtttttctg taagccgtct gttccctagc ccgctatcaa ttaaataatt
    22201 tttccctaag tactgaaaaa acatcggatc ggttacgtta gctaattgat ttttgtcatt
    22261 tgcgggatat tttttctccc ataaaggttt tggtacaacg ccaaacattg cgccaccgtc
    22321 aaaatgagta taccctccgc gtaaccaata aatctttatt tttccaattt gaatggaatc
    22381 cacttttaac gcctccaatt aaaaataaaa accagatgca gcagatgcat ctggttatcc
    22441 ttgttaattt ctatcaaatt ttgcttcaag acgatagatg gggaatcctt tagctgaaaa
    22501 tttttcttcg tattcagttt taatattccc ttcgtaatcg ctattatgca ggtcaagaga
    22561 tacaaaagtt aataacatat tgtattctga gaaagctact agcgaatatt cgaacaaact
    22621 gcgattatcg gttttgaaat gaatctcccc cgctttaggt agcagtcgct cataaatagt
    22681 taagaacgtt ggattcgtta gtctacgttt tgtatggcgt tttttcggcc atggatcgga
    22741 gaagtttaaa taaatttgtg ctatttctcc tttttcaaaa cattcttcta gtaatttagc
    22801 atctctagca actaatcgta aattagaaac gtctgcttca atcgctttat cgagcgccga
    22861 aacgagcacg ctttcgatca tttcgatacc aatatagtta atttccggat ttgcttttgc
    22921 catgccacta ataaattgac ctttaccgga accaatttcg atatggattg gattatcatt
    22981 tccgaatact tcacgccact gacctttgaa atcttctggg tttttgatgt aaattgctgg
    23041 gaattctttc aatctatctt ttgcccatgg tttatgtttt acacgcatct ttctttacac
    23101 ctcatcatct tctattgcat tttgaaaaat ttgttttgct cgttcattgg cttcattcga
    23161 atgctcggtt atgagttgca taaccgtttg acaaattgta taccatttta atttgcgatg
    23221 taattcttcg gttaatgtgg tgccgtaatt agagagccaa cttacccaat cttttcgcgg
    23281 aatatattgg tataaaatca ttccgatatc attcgcaggg tctgcaagca tcgcaccatc
    23341 ccaatcaact agaaacagtt cgttttcttc agaaataatc caattattat ggttaacatc
    23401 tccgtgacaa actacataat cgttcgtctg agcagcagag agattctgtt ctaaatagcg
    23461 gattgctgct attatttctt tcgatagctc gttattagct tttgtgttta cttttatgag
    23521 actcaaaagt tgatctgcag aaaaatagca gttttcgatt ttcgctagca tgtgttgcaa
    23581 gttttctgaa tggtggattt tagctaatag ttttgccact cgcggtccaa ccatttcttc
    23641 acgtgtcaaa atatggcaat tcacccattt ttgagcagtg atgacatctc cattctctac
    23701 gcgtctcgtc caaactaatt ttggaacgat attttctaca gaaagcgcag ctaaaaaagg
    23761 cgaagaattt ctttttaaaa agaatttttc gtcttcatgt gttgcaacga atgcctggcc
    23821 agtttcccct ccggccggag ctatgtcata ttctctccca aaaaagttat ctttcatcta
    23881 catgcacacc ttttattagc tctttgcaac ttcattatcc ctcgtttatt tcacttccga
    23941 acaaataggt aactattcat gattttactt ctcttagcct tactagtcaa gtcaacatat
    24001 gttcgttatc tagatttttt tacaaattta ctttatttac acaaaaaaag tgcattccat
    24061 caaaatggaa cacacttttt tcattatttt atgctttttc ggttttagta acaattggat
    24121 ccatggcact tctatttttt tgtataaata gtgctaggac acaagcaact acagaaagaa
    24181 ttccggcaac taaaaaggcc gtttcaattc cgtggataag aacatggttg gcaatatcag
    24241 ttttagtttt gccaatcaca tcggctggtc cgagcttagt agcgaaactc gcagcacttt
    24301 tagacataac cgttataagc gccgctgttc cgattgaacc agcaacttga cgcatggtat
    24361 taaacattgc tgaaccatga gatgctagtt ttaatggaag cgagttgagc gctgctgttt
    24421 gcagtggcat cataaccatc gccatcccag ccgaacgaat cgtttgtaca ataataataa
    24481 aagtcaatgt agtagattca tccaagttgg taaacatgaa ggtcgatccc gccatgataa
    24541 ttaagccaac aagtgataaa tatttagccc caaaacggtc aaacatcacc ccagttacag
    24601 gtgaaagtat cgccgtgaca agcgcacccg gcaagagaac aagccccgat tctagtggtg
    24661 aaaatcctct aacagtttgt aagaaaattg gtagtaataa catgccacca aaaaggccca
    24721 ttacaacaaa gaaactaatg gctgttgtaa gcgcaaaggt aggatattta aatactctaa
    24781 agttaagtag tggcgctttg ttgcttgttt ggtaacgaat aaatattcct agcactacta
    24841 gaccaagaat aataaatcca gctactttcc atgttaacca atcatggtct ccagcattac
    24901 taaatcctaa taataaacta ccaaacccga ctgttgacat gataacccca aggatatcga
    24961 gtttcgggaa agttcttttt ccgacatttt taagtaagaa aatcgctacg acaatatcaa
    25021 gaatcgcgaa aggaataata ataaagaata aattgcgcca atcatattgt tgaacaatcc
    25081 accctgaaag tgtcggacca attgctggag caaagttcat agcaagacca attaagccca
    25141 ttgctcgccc tcttcgttcc atcgggaata agtttaagac cacaacagta agaagtggca
    25201 taacaatccc agccccaatt gcttgtacca tacggccagc aataagcatc gtataatctg
    25261 tcgcaaatcc gccaattgca gtaccaatcg caaaggtaat catcgcaaat aagtaaagct
    25321 gacgcgttgt aaatcgttca attaaaaagg ccgtcattgg aatcatgaca ccattaacca
    25381 acataaatcc agtcgataac cattgccctt gactggctgt aattccaaaa tctttcataa
    25441 tacttggtag cgcgacattc atcaacgttt ggttgagaat cgtaacaaag gcgcccataa
    25501 gcataacaat caaaatacca ttacgcttca ctgatgtact tgctgctttc atattcaatc
    25561 tcgtgcacct tccctttcta aaatggtaat aatctctcgg tgcatttcta gcatttcttt
    25621 taacctttct tcgccaatct ctaagatagg ttctaaacgg ttgaagaata catgatacgt
    25681 ttctgctgct tttgtagctc ctttttcagt taattctaag ctgagtgcgc ggcgattact
    25741 ttcatttctt gtacgtttta aaaatcccgc tttcactaat cgatctacaa taccagatac
    25801 agtactttta ccaagcttca ttcgttctgc taattcgcca agtgttaatt ctgattcttt
    25861 ttgtaattct ctgattgcaa gtaattgggt tgttgtaatc tccctattcg ccgcttcttc
    25921 tgcaagcacg tgatgtgttt ttcgttgtac ttcgcgaaaa gagaaaataa cctctttcac
    25981 taatttttca tccatgactt ccctccatat tgttcgctcc caaatatttc gcatgcgaac
    26041 tattagcctt ttgaattata cacctccaaa aaaatttgtc aatcgcttaa aaccaggctt
    26101 ttcaaactga aagcggagcc aatagcgtaa tttcaacgga taaaaaagtt atataaattt
    26161 ttacataggt gtcaagacgc aaaaaaacct tcctaaaaaa ggaaggtttc tacttattat
    26221 tttgcaaatt ctaattcgcc acatgcttga acgatttctt ctacaaaata ttgatgaagt
    26281 tttgcggtaa taggtccgcg ttttccgtca gctacttgca ctccgtcgat atgggtaact
    26341 ggggtaattt cgattgttgt gcttgaaatg aatacttcat cggcttcacg aagatctgtt
    26401 aaagtaaaat cagcttcttt gaccggaata ccattctttt tcgcaacagc aataattact
    26461 tgacgagtaa taccatttaa gattaaatta tctgctgcgt gcgtccataa cacaccgtct
    26521 ttaataatag aaatattgga agctgaacac tcagttactt gctctccgcg gtgtaaaaca
    26581 gcttctaacg cattttgttg atgtgctttg ttttttgcta aaatgtttcc aagtaaattc
    26641 aaactcttga tgtcacagcg taaccaacga acatcttctt ctgtaattac tggtccacct
    26701 tgcacaaatt gttgttcatt tcttggtact tcacgagctg ctgctgttaa aacgccttcc
    26761 agcgggaaat catctggcat aacgtgatta cgcgggtttt gaacacctcg agtcacttgt
    26821 aaatagacat ttcctgtatt aatattattt tcagcaacta atttttcaag taacgctcgt
    26881 aactcttctt tagaataagg aataactaag tcaatttttg ctgcactcgc atataaacga
    26941 tcaatgtgtt cattataagt gaagaatttt ccattatata gacgaactac ttcatataca
    27001 ccatcaccaa actgatatcc gcggtcttca atgtcaactg tggcatcttc tctttccact
    27061 aaatggttat ttactaatac tttcatctca agtctctcct tgcatagtta atttttggaa
    27121 ctatctaaaa acttaatgaa acaaagaaac tgccgcaaaa ctaagctttg cagcagttaa
    27181 ttttttcaat tataaccctt acttcgctaa tttgtaaagt gcttctgcat aaattgcagt
    27241 agcttttaac aaatcatcaa aatagctgaa ttcgtctttt tggtgcatcg tgtcttcacg
    27301 gcctgggaat agtgcgccga acgccacacc agtctccatg tggcgcgcat aagttccgcc
    27361 accaattgct agtaaagtag cttcttcacc cgtttgtttt gtatacactt cttgtaaaac
    27421 ttgaattagc ggatgatctt ttggtacgaa aagtggtttg gaatcttcgt aatgcgtgta
    27481 ttgcgcgttg tactcataaa ccactgtttg cattttattt ttcaatttgt ccatattagc
    27541 agttactgga taacggaaat taagtccgta ttttccacct tctgctacat cataacgaat
    27601 aacgccaacg ttcattgtta gttcgccgct ttcttcgtct tcatagctaa tacctaattt
    27661 aactgcacgg gaatcgccga ataggtaatc gcgaccaaat gttacgaaat catttgccgc
    27721 gccagtcagc ttgaatttac caaggaaagc tactaaatga agaccagcgt ttacaccgtt
    27781 atttggttcc attgcatggg ctgatttacc aacaatatta attttaacgg atttgccgtt
    27841 ttcttctaat gttccttcta ctggatggtt tgctaggaag gttttgaatg cactcgctac
    27901 tttatcaaag tcttttacat cttctaaaat agctgttgcg tgatctggaa ccatgttgta
    27961 acgctcgcct gattctacgc taagtaaacg gaaagccgct tccccgcttg cttcaccatc
    28021 tttaaaagat acatctagtt ctgagatacc tttttccgcg tgaatgattg ggaattctgc
    28081 atcaggaaca aaaccaagtg ttggttgttc ttctgtttca aaataacgtt ccacacagct
    28141 cataccgctc tcttcatcag aaccaacaat gattctaaca cggcgagaaa gtggtaatcc
    28201 tagttcttta ataattttta gcgcatagta acctgcgatt gttggtcctt tatcgtccgc
    28261 aaccccacga gcgtataatt tgccgtcgcg taaagttggt tcgaatggtc cgttcgtcca
    28321 accatcacca actggtacta catccacatg gcctaaaacg ccaactagtt cttctccttg
    28381 accatattca aggtgtcctg ctacgtttcc aacttctttc gctgtgaagc cgtctttttt
    28441 accaagttca atcatatagt cgagcgcgcg tttcacgtct ggtccaaacg gcgcatcttc
    28501 tgttttttta ctgtcatcgc gaacactcgg aatgcgaaga agccctttta aatcttctaa
    28561 gaaatcatct ttgcgtgatt ccacttcttt ttgccaatta atttctgtca taattgttat
    28621 tccctccttc aaacttatct tctctattgt aaactgtttt tacgtagctt ggaagccgga
    28681 actccctatt ttctcataaa acctttaatt gcttcaaaat cccagcgttc catgcgcgaa
    28741 gaaaaaacga tatccatgac atttaaactt tctttttcta gtggtaaaaa gcgatattct
    28801 tcgtgttcat cggataattc gatttcgcca ccttctggca tttctaccaa ataaataaca
    28861 ccggaaattt ggaaatcctc atggaaaaat tcccacgtat catataaaat aaatggctgt
    28921 acttgtaatt ttgtttcttc ataaacttct ctaaaaaggg cttccccgtg cgtttcacca
    28981 taattcatgc ggcctcctgg aagttcaaaa acttctcctt ctaccccttt tttctttagt
    29041 gctaaaaatt ttccgtcttt tacgataact gctttcactg caggatatat aggtttcatt
    29101 ttacaaaagc ctccttatca tttaagataa acatgattta tctgttcttt attttacccg
    29161 gttgagtaga taaaagccag tgtcataagg aggttttaca aaaatgaaaa aaataacacc
    29221 aaaagcaatg tgcgcatgga ttcctaaacg cgaagatgaa acacataagg gtgactatgg
    29281 gcgcgttctg attgtcgctg gaaataaaca atttggtggt gctgctatta tggcggcaga
    29341 agcttgtgtc aaaagtggtg ctggtttaac aaccgtggcc tccgatagtg tcaaccgacc
    29401 tgctctccaa acaagaatac ctgaatgcat gtttattgat tatgaaaata tctcgagtct
    29461 cagcgaacaa atcagccaat ttgatacgat tttaattggt cctgggcttg gacttgatgc
    29521 ctatgcggaa gaaatttttc gtttagtttt agaaaaatca accgaacagc aacaagtaat
    29581 tattgatggt gatgggatta ctatttatgc aaaaggagaa aatccccatc ctgccgcgaa
    29641 actaactttt acgcctcatg ctggagaatg ggaaaggctt aaagtattag cgccagatgc
    29701 cgtaacacca actgatgtag cgcttgctat cgacgcaacg attgttttaa aagggcaccg
    29761 tacaaaagtg tattctggcg agtctgcttg gcaaaatatg tacggaacac cagcaatggc
    29821 aacaggtggt atgggtgata cgcttgccgg tacaatttgt ggcttaatgg cgcaaactga
    29881 aaaaccgatt accggcactc tagccgcggt ctttcttcac agctatatcg gcgaaatttt
    29941 ggctaaaaaa cgctatgtgg tacttccaac cgaaattgcc gaagaattac cgacttactt
    30001 gaaaattttt agcgaaactg acgaacatgc ttaataaaaa atcctccctt tttgaaagag
    30061 aggatttttt tctatgcttt tttaaatcta ctcgcccata atgctaattt ttgattccaa
    30121 atgaagtaac atccaatgcc actgaaaagt gctgcattgc cgattaagaa tcctgcaact
    30181 acatcgcttg gaaagtgcac ccctaagtaa acacgcgaat acatgatgaa aataaccaga
    30241 ccaaaggcta gaatgccaat tgtaaatcga agccatctgc ggctcacgta tagaattaac
    30301 aagaaagcaa gcataccata aaataccgta gaaccggtcg aatgtccact tggaaaacta
    30361 aatccacctt gttcgattaa tttatacgta ggccttggtc gttgaacgat atttttaata
    30421 attgacggga taagtgctcc accaattaaa acaataccac caaaccaaat cgccatatct
    30481 acttttcgaa tgacaacaaa tataacgaca atgactgctg ttaaaataca aatggtcgcg
    30541 actccgccaa tatccgttag ataagaaatc accgttgttt tcgtattcgt aatgcctaca
    30601 cggataatac tgttccaata atcatcaaaa tgttgaatcc actttgcacc ggtcataacg
    30661 cctgtcataa agaaaataaa tccaaggaga gcgataccgc taataataaa tggtgttttt
    30721 ttcatataat cctcctagcg aattcttaat ttttcacgca gtctcgttcc acgtggccca
    30781 aataatttat cggataagtg gagtttaaat gccatgtaac catagaaaat tgcacctacc
    30841 ccgccgcaaa cgattgtaat cattaatgca ggaattttcc ggtctgttga tacaaagtta
    30901 gacatcataa tataaagcgc aataactaca agccccatta aagccgtcat cccaaagaaa
    30961 agtaccgttc gccgtaaaat aactttgaac gaaaaacgaa catatttctt aataataagt
    31021 agcatgaaaa tacaagatac cgcatagcca attccggttg caataatgga tccctttgcc
    31081 tcaaataaca taatgagcgg catttgaaga actgatttag ccagtaaacc gagtaataaa
    31141 ccaagtacgg taaatcgttg ttcatcaatc ccttgaagga ctgcagcaga tacgctaaat
    31201 aaggaaaata aaatagcgat tggcgcaaaa agttgtagta atgctgtacc gttatcactt
    31261 ggcgagaaaa acaccgtaaa tagcggtctt gctagcatcg caatcccaaa acaagctgga
    31321 attgttaaaa ataataaaat ttgaaaaaca tcattaagtt gacgcttcac ttgcgcatat
    31381 tcttttctca cataagctcc cgtcactagt gggacaagcg ccatcgaaaa cgcaatcgcg
    31441 agtgtgccgg gaatcataat caatttttgt acatcaaagt taataattgc cacataagaa
    31501 ttcactagtt ccggcgtaat gccaatatat tccagtaccc gtcctaatgt aaactggtca
    31561 atcaattgat aaagggatgt agcagatcca acaataataa acggaatcgc cgaaagaata
    31621 atatctttat aaagcgtcgg gatagaaatt ttcacagtcc ctctgtcttc taaaagcatt
    31681 cggtccagtc caggttttcg tttgtaaaaa taccaaagaa gtaaaagtag acttgcaaaa
    31741 gcgccgacaa acgcggagaa agtagcaata ctaatagccg ttacgacatt cccatcaagt
    31801 acatacatga caataaatgt tccagcaagt aagaacataa tccgaacaac ttgttctaac
    31861 acttgcgata cagcagaagg tcccatcgaa ttatatcctt ggaaaaagcc tcgtagtaaa
    31921 ctcattaccg gaataattag taaggcgaaa ctaactgcac gaataacttg aatcccatct
    31981 gctaaactat aaccgccctc cagttgttgc atccgagcaa gcgttggagc aagtccatac
    32041 attgctagga aacagacaat gccggagaaa atcattaaat atacaccggt tttaaataaa
    32101 cgtcgaccta cagcgtattc ttccatcgca ttatattttg ctatatattt agcaacagcc
    32161 agcggaatcc ctgcagtcgc aatgcttaag aataattgat acggcacata accgaaatta
    32221 tatagaagcg ctggttcatc tcctccaata atcgcataaa acggaatcac atacaatatt
    32281 ccgagcactt tagagattaa tgtccctagc gtcagaataa atgttcctct gagcagtttt
    32341 gaacccatcg tctaacttcc tttacattaa attatatatc cttgtttact ttaccattaa
    32401 ctcttttaaa aaaaaagaac aaacccaaat aaatatcggc ttgttcttta caaaaagttt
    32461 aaatcaaatg aagtttttta cgaattttat acattcggtc ccctaaaata tagtttaaca
    32521 gacctgcttt tgcagccaaa aacgcataaa tataggcacc aaagccggct gaaacaaaaa
    32581 caataactag tgctgttaat cttgcatgtg gatttaaaaa taaaatcaag ccatgataaa
    32641 tcaaccagac actaagaagc atcaccgcac taattcctaa aataagtata agccgtctaa
    32701 ataaatattt aaacgagtac ttcgcatatt ttttaataat aaaaacggtg aatactacgg
    32761 aaacaatata accaagtccc gtagctaatg ccccaccttt tgcccctaaa agcaaaatta
    32821 atggcatttg caacactgat tttgtcagta aaccaagtaa gagactaaga acagtgtacc
    32881 gttgttcatc aattccttgc aaaatcgcgg ctgttacact aaataacgag aagaatatgg
    32941 caaatggcgc aaaaaactga agtaacatcg aaccatctgc attataacca taaaaaatgg
    33001 tgtaaagcgg atccgctaaa agggcaattc ctaaacaagc tggcacaact aaaaatagta
    33061 acacttggaa aacagccgtc aaatgatgat gaacttcccg aattcgccct ttatggaaag
    33121 atgccgccac taaaggcaca agtgtcatcg aaaatgccaa ggctaaagtt cccggtatca
    33181 taataatttt ttgaacggaa aagttgaaaa ttgaaagcaa atcttccgct gttttcccgt
    33241 ccataccatc gtaggttaaa acacgagcaa acgtaaataa atcaatttgc tgataaaggg
    33301 acatcgccat tccaacaata ataaatggca ccgcagatat cgaaatttct tttaatagat
    33361 gaaaagtcga aacgcgcaac ttgttgtcac tgccagcaat cattttttga atacccggct
    33421 tccgtttccg gtaataccaa atgagacaaa tcaagctgaa aaacgcacca acaaaagccg
    33481 caaaagtcgc taaactcatc gctgtaacaa gacttccacc aattaaatgt aagacaatat
    33541 acgtactagc aagtaaaaat acaattctcg ctatttgttc aattacttgt gacacggcag
    33601 aaggtcccat cgaatgaaat ccttggaaat aaccacgaag taaactcatt acaggaataa
    33661 taagtaatgc aaaacttact gcgcgaataa ccgtcgtaat atcttcaata ctcgttccgc
    33721 cactaacctc ttgcatcccc gcgagtatcg gggcaaaaat atacattatt aaaaaactaa
    33781 caatccctgt gaatatcatt aaatacgtac ttgatctata caatcgctga cttaaagcat
    33841 attcatttaa cgaattatac ttcgagatat atttggcaac tgctaaaggt actccagctg
    33901 tcgcgatatt
//
LOCUS       DASDYO010000012        33658 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.012, whole genome shotgun sequence.
ACCESSION   DASDYO010000012 DASDYO010000000
VERSION     DASDYO010000012.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 33658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 33658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..33658
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.012"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..140
                     /locus_tag="U0290_000536"
     CDS             <1..140
                     /locus_tag="U0290_000536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725347.1"
                     /note="Built to rescue LMOF2365_14255 during structural
                     annotation change regression; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="bacteriocin-like WGxF protein"
                     /protein_id="HEM2300587.1"
                     /translation="IFFRVLLLGYENLVIYWGSFVLIYFILNLITNKILLPRGGIIEN
                     S"
     gene            305..1141
                     /locus_tag="U0290_000537"
     CDS             305..1141
                     /locus_tag="U0290_000537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HEM2300588.1"
                     /translation="MRIERILNNNIVSAIDEDAQELLILGKGLGFNSKVGDPINESKI
                     EKVFELKDDTMDKFKMIVNEIPIQFLEVTDDIVKLFKMKTTKDISDVIYISLSDHLYF
                     ATQRLQENVVIENPLSWEVKRFYQEEYAVAKEAAKMVESKLEIELPDAEISNIALHFV
                     NAEVDSDMNDVTHIMQLIQEIISIIKYHFNIEFDEESTNYYRFMTHLKFFCQRVIIGE
                     TIDEMDEFLYQTVKKSRGAIFECIDKIGVFLEKNYQFTMSHSEQFYLALHIERLLKRK
                     NN"
     gene            1241..3094
                     /locus_tag="U0290_000538"
     CDS             1241..3094
                     /locus_tag="U0290_000538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM2300589.1"
                     /translation="MDYNQLAKEILQAVGGKNNVNEVYHCITRLRFQLKDQSKVNEKQ
                     LKDLDKVMGTNVAGNQFQVIIGNDVPKVFDALVTENPAWKNKETTNKTTRQKGIKGFF
                     SNIFDALSGVFAPILPAIAGAGLIKGFMALFVSLGWLATDTETYRILLAIGDGVFYFL
                     PILVAVSAARYFKANMFVALGIGAALLYPDLTALLSAGTTPHFIGLPVTPVTYAYSVI
                     PILLAIWIMSYVEKWVDRIIPTSLKLLFVPLITMFIVVPLTLVVIGPLGTFVGDGVSG
                     GINWLLNNGGVIGGILIGGAMAIIVMTGMHYAIVPFVISNLAKYGYDKFLPLTYISNM
                     SQAGATFGVFFRAKDKKLKSLAFSTGLTALMGVTEPAMYGINVVYKRPFMASLIGGAA
                     GGGFAMMFGVKAYVLTGNGGIPGLPGLVGDTFVYALIAMALAFIVALIFSYIFGIDEQ
                     IVEATPVAEKIAAGTEVLQAPVTGELVKMSQVNDTTFADEIMGKSIAIKPNEGKLYAP
                     ANGTIISLFKTKHAIAMQSDNGAEILLHVGIDTVKLDGNYFTAHVATGDVVEQGDLLV
                     TFDMEKIAEKYDTTTMMVITNTNEYALVEAKDSGTVTKGNQVMELRSEQNE"
     gene            3087..4535
                     /locus_tag="U0290_000539"
     CDS             3087..4535
                     /locus_tag="U0290_000539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="family 1 glycosylhydrolase"
                     /protein_id="HEM2300590.1"
                     /translation="MSNTKFPDGFMWGGATAANQFEGGYNLGGKGLACADLFTGGTHT
                     EPRRITAQLEESTFYPSHEAVDFYHHYKEDIKLMAEAGFKVFRMSINWTRIFPTGKEA
                     EPNEEGLQFYEDVFKELKKYQIEPLVTIAHFDIPLALTNEVNGWASRDLIDYYLHYCE
                     VIFKRYKHLVKHWLTFNEINTATMEIGNYLSLGIRHAEGDFLHQKDDPTVRYQALHHQ
                     FVASAKAVKLGHSINPEFMIGCMIAYMPRYPRTCEPTDVLLAKQTEAMHSHFCGDVHV
                     KGYYPFYAKTFFKDNGIELEFDPEDEQVLREGTVDFYTFSYYLTLCASNDPAYKNSGK
                     SVIGGAENPYLKTNDWGMQTDPVGLRIALNDLYTRYNIPLMVVENGLGAFDKLEDDGT
                     INDPYRIDYFKEHILQMHKAIQDGVDLIGFTIWGCIDLVSASTGEMAKRYGIIYVDKY
                     DDGTGDYSRKKKASYYWYKDVISSNGEIGLRE"
     gene            complement(4575..6905)
                     /gene="gshAB"
                     /locus_tag="U0290_000540"
     CDS             complement(4575..6905)
                     /gene="gshAB"
                     /locus_tag="U0290_000540"
                     /EC_number="6.3.2.2"
                     /EC_number="6.3.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate--cysteine ligase
                     GshA/glutathione synthetase GshB"
                     /protein_id="HEM2300591.1"
                     /translation="MIKLDMTMLDSFKEDPKLRKLLFSGHFGLEKENIRVTSDGKLAL
                     TPHPAIFGPKEDNPYIKTDFSESQIEMITPVTDSIDSVYEWLENLHNIVSLRSENELL
                     WPSSNPPILPAEEDIPIAEYKTPDSPDRKYREHLAKGYGKKIQLLSGIHYNFSFPEAL
                     IDGLYDKISLPEESKQDFKNRLYLKVAKYFMKNRWLLIYLTGASPVYLADFSKTKHDE
                     SLPDGSSALRDGISLRNSNAGYKNKEALYVDYNSFDAYISSISNYIEAGKIESMREFY
                     NPIRLKNAHTDQTVESLAEHGVEYLEIRSIDLNPLESNGISKDELAFIHLFLIKGLLS
                     EDRELCSNNQQLADENENNIALNGLAQPALKNCDNEEISVVEAGLLELNKMSDFIQSL
                     RPEDTKLQAIIEKQKERLLHPEKTIAAQVKQQVTKEGYVDFHLNQAKTYMEETEALAY
                     KLIGAEDMELSTQIIWKDAIARGIKVDVLDRAENFLRFQKGDHVEYVKQASKTSKDNY
                     VSVLMMENKVVTKLVLAEHDIRVPFGDSFSDQALALEAFSLFEDKQIVVKPKSTNYGW
                     GISIFKNKFTLEDYQEALNIAFSYDSSVIIEEFIPGDEFRFLVINDKVEAVLKRVPAN
                     VTGDGIHTVRELVEEKNTDPLRGTDHLKPLEKIRTGPEETLMLSMQNLSWDSIPKAEE
                     IIYLRENSNVSTGGDSIDYTEEMDDYFKEIAIRATQVLDAKICGVDIIVPRETIDRDK
                     HAIIELNFNPAMHMHCFPYQGEKKKIGDKILDFLFE"
     gene            7075..7962
                     /locus_tag="U0290_000541"
     CDS             7075..7962
                     /locus_tag="U0290_000541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300592.1"
                     /translation="MKIRNLTKKMDDNLVLKDVSFDLKAGEITALIGRNGVGKTTLFS
                     TMTGIYLPDEGDVFLGEESIFKHPEVKQQLFFLEDNMNHFNTYSVQTVVKIYRQIYTT
                     FDEAFFNELMQRFELPMKAKLMSFSKGRKALFFIILAVSLNVRFLLLDEPMDGLDIII
                     KKQILATIKDTVKKRGTSVVIASHRLEELEAIADRVIVLKGASVELDYYLEDMRTDAV
                     KIQVAFKTKKIPDFVKNNAQLLYRNGRIYTLLVTENASSFLAELRLEEPVLLEEMSIS
                     IEDIFTVHLANDKIDYYEI"
     gene            7989..9119
                     /locus_tag="U0290_000542"
     CDS             7989..9119
                     /locus_tag="U0290_000542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEM2300593.1"
                     /translation="MFNRGLWYREWRNMRWMLLGVVILFFLGITLGLMSDADRWNSQK
                     EYYESSEFLKQQKENPEFKTSDEEMKASLTVAYLAVPMYTNFVQDEFVDYMPFMFYFQ
                     VEMFFTLIKVSVFILGVLAVIFERYTRANRFTASLPYKRTHIVGVKMMMGIATIGLSY
                     LISMGIGLTYFMSHVPKEYIQLDAPKFWVDIVGGLFTYLLIFLVAILIGLLIGSPIAA
                     AFVAFGVMLLPSVLNPTLDNMYNFIWPHGGDKGMSKLLRFEDYVNIFSPFSFESASFG
                     AVIFSVILSVLMVVAILILYKKQHIERSGYLFAFSWVKWPFLVLFSLFVGMTAANLAV
                     TDTELGFVGYLAWGIGATIGSFILALYILNKMRGLFQLSKTN"
     gene            9190..9852
                     /locus_tag="U0290_000543"
     CDS             9190..9852
                     /locus_tag="U0290_000543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1129 family protein"
                     /protein_id="HEM2300594.1"
                     /translation="MTTETETIKPQLAELKANLTKRNLQYVMEVEKHLRETHYSAEQQ
                     EIIVYEMSEKILAEQKKGITARKLFNLTPTEYVVSLDVKAATVEQNTDKWWLVLDGGL
                     LVLGAMMLISGISAYFQKNAQTLGIIVLLITAVVGGFAMLILRKYASNMRAGQKGGTI
                     KYLLVAVGVIAVWMFVMTIVQVTIPPNINVALSPIVNTVGGAIIIALRFYVKKKKNIP
                     SL"
     gene            9953..10687
                     /locus_tag="U0290_000544"
     CDS             9953..10687
                     /locus_tag="U0290_000544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2300595.1"
                     /translation="MFSYEVIRQFTETEHHLYRYIMDNRDKVMFMRVRELSEVTHVSP
                     ASIVRFTRKLGCEGFSEFKVKLKQEATREVKKKTADTVEVLEEFFERTMNRDYDHVLD
                     AAAEIINEADLVVFFGIGTSGILAEYGSRFFSNMKKRTFYIKDPFYPNPGEQFKNKAV
                     MIILSVSGETDQVLEQAQNMQQYGSRIISITNTSHNTLAGLSDVNIPYYVTQEMVDKT
                     NITTQIPVLFLLEAMAKKNYNQEQEE"
     gene            complement(10727..11035)
                     /locus_tag="U0290_000545"
     CDS             complement(10727..11035)
                     /locus_tag="U0290_000545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2300596.1"
                     /translation="MNEMETVIFGMISQVGSARSSYLEGLRAAREGNFEEAEAKLQEG
                     SETLANGHHEHHKLIQKEASGEKVEIQLLLIHAEDLLITTETLREVVTEFVHVYKKIS
                     "
     gene            complement(11028..11912)
                     /gene="bglK"
                     /locus_tag="U0290_000546"
     CDS             complement(11028..11912)
                     /gene="bglK"
                     /locus_tag="U0290_000546"
                     /EC_number="2.7.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-glucoside kinase"
                     /protein_id="HEM2300597.1"
                     /translation="MKIAAFDIGGTALKMGVVLPHGEIILTKSAEIIASDGDQILAEM
                     KLFLAENTDVTGIAVSAPGYVNPKTGLITMGGAIRRFDNFNLKEWLEAETGIPVAIEN
                     DANCALLAEKWLGKGQNLDDFLCLTIGTGIGGGIFSNGALVRGGRFRAGEFGYMFSER
                     PGAFRPGKYTLNETTTMLVLRRQYAELTGRPLEEITGEEIFAKYDGHDAVSERLITEF
                     YTGICTGLYNLIYLFDPTHIFIGGGITSRPTFITELKHHMESFGLRDTIIETATHKNQ
                     AGLLGAVYHFLQEENRHE"
     gene            complement(11924..13276)
                     /locus_tag="U0290_000547"
     CDS             complement(11924..13276)
                     /locus_tag="U0290_000547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2300598.1"
                     /translation="MSIMSKFEHGMERVLVPVANKLNSQRHIAAIRDAFILVFPLIMA
                     GSIITLINFAVLSPDGFIAKILFLGKIFPNLADAQAVFSPVMQGSTNIMAILIVFLVA
                     RNLAIFFKQDDLLCGLTSIGAFFIVYTPYTVVDNASYMTIKFLGAQGLFVAIIVAIIT
                     GEVFSRLARSPRLMIKMPDQVPPAVARSFKVLIPVIIITILFSVINYLITLIAPEGLN
                     DLVYTVIQAPLKDMGTNVFSVIIIGLVSNLLWVLGIHGPNTVAAIRDTIFTEPNLDNL
                     SYVAQHGSAWGAPYPATWAGLNDGFANYGGSGMTLGLLIAIFIASRRADYRDIAKLSL
                     APGIFNINEPVIFGLPIVLNPIMVIPFIITPAINTLIGYFFISTKLIPPVAYQVPWTT
                     PGPLIPFLGTGGNWLALLVGLLCLAVATVIYLPFVLVSNKIAASDAAMDKNATASTEQ
                     "
     gene            complement(13309..13611)
                     /locus_tag="U0290_000548"
     CDS             complement(13309..13611)
                     /locus_tag="U0290_000548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2300599.1"
                     /translation="MKKILLVCAAGMSTSLLVTKMKAHATSIGEEIEIEALPVSEASS
                     VVDKMDIVMLGPQVRYQKPQVDELVQGRIPVIVIDMKDYGMLNGKAVLEKAFAEIG"
     gene            complement(13655..15109)
                     /locus_tag="U0290_000549"
     CDS             complement(13655..15109)
                     /locus_tag="U0290_000549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2300600.1"
                     /translation="MEHNKLKPFPKDFLWGSASAAYQVEGAWDEDGKGPSVWDEFVRI
                     PGTTFKETNGDVAVDNYHRYKEDVALMAEQGLKAYRFSVAWSRVIPHGNGEVNEAGLK
                     FYDNLIDELLSYGIEPVVTLYHWDIPQGLQDEYGGWESRKVVEDFTNYAALLFERFNG
                     RVKYWVTLNEQNVFISHGYKLAYHPPGVSDDKRMFAANHNANLANASAIAKFRELGTS
                     GKIGPSFAYGPSYSIDANPANVLASENSEEFNAHFWMDVYTWGEYPTATWNWLEEHGL
                     APEILPGDTELLKKGKPDFMGVNYYRSMTHAFNGKDGVGSGKMNTTGEKGTSEETGVP
                     GLYKNTNNPYLEKTNWDWDIDPTGLRIGLRRITNRYKLPIMITENGLGEYDSLTEDHK
                     IHDEYRIEYIRAHALAIQEAITDGVEMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDE
                     NDEKELKRYKKDSFYWYKKTIEANGANLVEEQGK"
     gene            complement(15137..15445)
                     /locus_tag="U0290_000550"
     CDS             complement(15137..15445)
                     /locus_tag="U0290_000550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300601.1"
                     /translation="MGRLRQCNCNTGKNCTDNIQKFSYTSSRIQKKHVISPLFINTYR
                     IRDTSPNVNCSSNHMHETQRFSSETYTIDMKHEPKAPKSIYQLVETVYINKASKTKTD
                     "
     gene            15627..17237
                     /locus_tag="U0290_000551"
     CDS             15627..17237
                     /locus_tag="U0290_000551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM2300602.1"
                     /translation="MTIVAMNDVVKSFTGDIILEKVSLQLEEGERVGLIGRNGEGKST
                     ILKILKGTEGVDSGIVTSKKGAKIGLLEQLSTVDPNIIVEQYLRTSFGELEELEKELR
                     ALEGEMATNSSEKLMNRYGDKMALFGELGGYEMDANLNKVVNGLGIGLLLSQRWGDLS
                     GGEKTKAALAHLLLQKTDLLLLDEPTNHLDLMAVEWLTAFLQHYSGTVLVVSHDRYFL
                     DEVVGKMVELENRELIVYHTNFSGYLKEREERLLREFQDYKDQQKKIKKMQQAIKRLR
                     QWAMQANPPNDAMFRRAKNMERALERMEKVKRPVLTQKQMQLQFDEAGRSGQEVVVME
                     NLSKSFSEKAIVQDVSLQIRQGERVAIIGENGAGKSTLLKIMEGKVVPDVGMIKVGAS
                     VKIASLSQQMEELNEKLTVLDAFRDKVAVTEGEARQMLAGFMFYGEMVFRKVGNISGG
                     ERMRLRLAQFINMPVNTLILDEPTNHLDIASREILEEAIRAFSGTIITVSHDRYFIDQ
                     LCSKVIWLENKQLTVYEGNYSYATSKRR"
     gene            17295..17825
                     /locus_tag="U0290_000552"
     CDS             17295..17825
                     /locus_tag="U0290_000552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ADP-ribose-binding protein"
                     /protein_id="HEM2300603.1"
                     /translation="MEITVVKGDITEQDVDVIVNAANPGLLGGGGVDGAIHQAAGPDL
                     LKECQEVINRIGTCPAGEAVITSAGDLQASYIIHAVGPIWKDGEHQEANKLASCYWKA
                     LDLAAGKELTSIAFPNISTGVYGFPKKLAAEVALYTVRKWAEEEYDTSIEEIRFVCFD
                     EENLKLYNKLINSEVV"
     gene            18113..19579
                     /gene="guaB"
                     /locus_tag="U0290_000553"
     CDS             18113..19579
                     /gene="guaB"
                     /locus_tag="U0290_000553"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEM2300604.1"
                     /translation="MWETKFAKEGLTFDDVLLVPAKSDVLPNDVDLSVEMAPSLKLNV
                     PIWSAGMDTITEAKMAIAIARQGGIGVVHKNMSIEQQAEEIEKVKRSESGVIIDPFYL
                     TPDHQVFAAEHLMGKYRISGVPIVNNEKERKLVGILTNRDLRFISDYSTVIKDVMTKE
                     NLVTAPVGTTLKQAEQILQKHRIEKLPLVDEAGILKGLITIKDIEKVIEFPNSAKDKH
                     GRLLAAAAVGITNDTFVRVEKLIEAGVDAIVIDTAHGHSAGVINKISEIRQTFKDVVI
                     VAGNVATAEGARALFEVGVDIVKVGIGPGSICTTRVVAGVGVPQITAIYDCATVAREF
                     GKTIIADGGIKYSGDIVKALAAGGNAVMLGSMLAGTDESPGETEIFQGRQFKTYRGMG
                     SLAAMEHGSKDRYFQADAKKLVPEGIEGRVPYKGSVADIIFQLVGGIRSGMGYTGSPD
                     LRHLREEAAFVRMTGAGLRESHPHDIQITKEAPNYSIS"
     gene            19740..21512
                     /gene="recQ"
                     /locus_tag="U0290_000554"
     CDS             19740..21512
                     /gene="recQ"
                     /locus_tag="U0290_000554"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase RecQ"
                     /protein_id="HEM2300605.1"
                     /translation="MIEQARAILQQNFGYQDFRNGQVDVISKLCAGEDTLAIMPTGGG
                     KSLCYQIPALLFDGLTIVVSPLISLMKDQVDALVSEGIAATFINSTLTNREIDIRLDA
                     AFSGELKMLYIAPERIETPGFQRLIEQVPISLFAIDEAHCISQWGHDFRPSYLTLCDS
                     LDKMTRRPLVIALTATATQAVSDDICRLLKIGADSVVKTGFSRDNLAFQVVKGQDKDK
                     YLIDYLTKNVTESGIIYASTRKEVERLHTFLLKKGVESGMYHGGMTDLARKDWQEKFL
                     YDDIRVIVATNAFGMGINKSNVRFVIHYNIPRNIEAYYQEAGRAGRDGVPSDCILLFS
                     PQDSRIQQFLIEQSEMDDERKQNEFAKLRQMTGYGYTEICLQKYIVQYFGDDEENCEK
                     CSNCLDTREATDVTILAQQVFSCIKRMGERFGKVLIAKVLTGSADQKVKDWRFDELST
                     YGLMKDASQKDVLQLIDYLTAEKYLQPTDSQFPSLKLTDRAVSVLRGELKVERKQAKR
                     AEKVKIDVNSDLFEKLREVRRELAAKHKVPPYIIFSDETLREMCAYMPQTEDALLEVK
                     GIGAMKRDKYGAEFLAVLQQEASK"
     gene            21536..23689
                     /locus_tag="U0290_000555"
     CDS             21536..23689
                     /locus_tag="U0290_000555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase III"
                     /protein_id="HEM2300606.1"
                     /translation="MTKTLVLAEKPSVGKDIGRVLGAKQGKNGYLEGGKYVVTWALGH
                     LVTLADPERYDSKYKNWNMEDLPMLPEKMKLEPIKQTRKQYETVKKLMNRTDITTIVI
                     ATDAGREGELVARWIIDYAKIKKPLKRLWISSVTDKAIREGFEHLKPGKAYENLYHSA
                     VARSEADWVVGINATRALTTKYNAQLSCGRVQTPTLAMIQHREEEIRNFKPREYYGIT
                     ALTEQESFTWNNGQTFDKALAEKLVKSLQGENAVITDVSMKEKKNFSPGLYDLTELQR
                     DANNRYDFSAKETLNIMQTLYERHKVLTYPRTDSRFISTDIVPTLKERLAACGVGENA
                     KAARQISGKPIKANKSFVDNSKVSDHHAIIPTEQPVSLGDLSDKERKIYDLVVKRFLA
                     VLSDPYIYEETSVKAKIGQEEFTLKGKVVKSLGWKSIYGESREPDQLTKMKKGDTIPV
                     KRINLETGKTKPPARFNEATLLSAMENPSKYMETTNKALAKTLGETGGLGTVATRADI
                     IEKLFNSFSLEKQGKDIHITSKGRQLLELVPEDLKSPELTARWEQKLSKIAKGELDYR
                     KFTEEMRDYAKKAVTEIKQNDKKFRHDNITSQKCPDCGKPMLKVKGKRGTMLVCQDRE
                     CGHRESVSRTTNARCPNCHKRMEMRGEGDKQIFVCICGHREKLSAFQQRRDKQKNKNV
                     SKTDVAKFMKKQNKQEDEPFNNPMAEALAKLKLDK"
     gene            23798..25465
                     /locus_tag="U0290_000556"
     CDS             23798..25465
                     /locus_tag="U0290_000556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEM2300607.1"
                     /translation="MKHNQLIIETDVPAEMRDGVTLYADIYRPADAGEYPVLLTRLPY
                     SKSYGLHFIRPNILAEQGYVVIVQDVRGRYTSEGDFVPYIAEVDDGYDTIEWAANLPY
                     ANGNVGMFGLSYYGYTQILAAISGNKHLKAIAPIMAQNSMTDVFNDHDGALELGMWET
                     WNLESMLPNMLARTYKTQDELEEAVNTLMKNLDNLDALYQFKPYKDWPAIGQNEMPYF
                     SELLNYEPTHNHWQKIDAKSNYDKINVPGLHVAGWYDCFLDKTIANFQNGHLRGLGDK
                     LIIGPWTHANFTQMIGDRDFGMAGTKWGEANMHARHIEWFNHWLKKEPLPASAPVNYF
                     VMGLNDWKTAENWPPQNANMTPLYFKNEKVSAEFTPPTTSSEAKFSYDPENPVPSNGG
                     GTLHKALNADGPRDQQQIELREDVLCYSTEPLKEAIEVTGSIQVKLWAKSDAPNTDFT
                     AKLVDVFPDGTAFNLADGIIRAAKQHGDNVQNNINEYTIDLWATSNLFQKGHQIRVEI
                     SSSNFPRFDPNPNTGDNFINSTESQIANQTIYHSPEFPSHILLPIVR"
     gene            25644..26981
                     /locus_tag="U0290_000557"
     CDS             25644..26981
                     /locus_tag="U0290_000557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase"
                     /protein_id="HEM2300608.1"
                     /translation="MKNIIKKTGIVIMAASLAVSGFLVSPKAAQAAEAPNVNANAAIA
                     IEESTGKILYSKDADKLMGIASMTKMMDEYLLLEAIDKGQIKWDDKVTISEYAYKVSQ
                     DTSLSNVPLRLGEEYTVQELYEAMAIYSANGAAIAISEKIAGSEKEFVDAMNKKADEL
                     NLGEHQFVNATGLNNEDLKGGQQVGGPKDENKMTARGMAKLAKHLINDYPDVLKTAST
                     TKKEFRKGTSDQIDMTNWNWLLPGLIYGRKGVDGLKTGTTDYAGMCLTATAVQDGMRV
                     ITVVLHANGGAPGEHTSARFDETNKMLDYAFNNFKVKEVQKAGSKVKNPSTIAVDKGK
                     EDTVGLVTKDAVKLVVPKNGNEPKLNTKVTMKEKTIEAPVKKGTEVGKMEVSLKDGDK
                     LGYVDGKQTETIDVLTASDVEKANWFMLSAQAVGSFFTGIGNYVSDGVKGWFN"
     gene            complement(27062..28009)
                     /locus_tag="U0290_000558"
     CDS             complement(27062..28009)
                     /locus_tag="U0290_000558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM2300609.1"
                     /translation="MGILNEKVAVLLPCYNEELTIGKVIDDFKKELPNADIYVYDNNS
                     KDKTFEIAKDHGAIVRKEMRQGKGNVVRSMFADIDADYYLMVDGDDTYPAEYCHEILE
                     VLRNKEANMVIGDRLSNGTYTEENKRNFHDFGNSLVRNTINRIFKSNLRDIMTGYRGF
                     DRYFVKTMPVLSPGFEIETEMSIHALENRFLVKEIEIDYRDRPEGSESKLNTFSDGFK
                     VIMTIVRLFKNSRPFLFFNLLASLFVLVGVLVGLPVIIQFAQIGLVLKFPSALLATGL
                     IIMGMLFFICGLILDTIAHRSRQSYFLELVKYRERNPLN"
     gene            complement(28020..29873)
                     /locus_tag="U0290_000559"
     CDS             complement(28020..29873)
                     /locus_tag="U0290_000559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300610.1"
                     /translation="MLNKKRVIVGVLLLLLSLISISYYSETFKLTLSWLLFAVVLTVL
                     YFRQEKNFQFQWSTLITSLIISLFWMASSFNGGPYGGNFVFNSIILAGTFLVITIFVL
                     LLLLEMRTEYKARPNRKVKWPFFALFTSIPFVVWMISFLAYYPAKMTFDSYYQWGMAH
                     GIRQYSQWHPLLHTLWIETTSAIYDSPSSYIFSQIIVVSLIVGFAIYTLVKMGAHIWI
                     GVCISIGYAIYPAAMFYSATAWKDFPFAAFILLFTVLILKIVQSNGMWLKNWWHLIAF
                     VLVAFVCINLRNNGMMIIIVSLLCLLIFMKNFRLIITGILVGTLGLNFLFGLVMTNGL
                     NAQPNPLNQALAIPSQQIGATFYNDGNFTPELKEYFTSILPEENWKKDYNPYTVDPIK
                     HDTKYNSSVIEDDFGLYIKNWFKLLTANFGTYVGAYLDQTAVIWQFYSPENYKVFFDT
                     SANIQDTRYDVRAFAKFFPEGLSEEEINKLGYEVYQNEYKNATGKDAVSYNEYKRRID
                     DSTNPLISISKAPSLKKITDSIYAKTTNEWQNYLLKGAIPLVLLIIAIAAVCLQRPKK
                     KLLIFAPVVMALITIAIAMPATDFRYSYSFIFTVPIVFFATKLKNYKENQF"
     gene            complement(30053..31825)
                     /locus_tag="U0290_000560"
     CDS             complement(30053..31825)
                     /locus_tag="U0290_000560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466274.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300611.1"
                     /translation="MKEFKQISRFFWHYLRGYKPQLFVILIAVVFATYLQVKAPQYIG
                     NAVQELGDYVVNLMQTGVDDKSDFIHIIWMLILCYVLLAAATFIQSIIMTGVAGKSTN
                     RMRIGLFRKMEKLSIRFFDSRNDGEMLSRFTSDLDNISNTLNQALIQVLSNVALMIGV
                     IIMMFQQNVELAFVTLISAPFAIIIATVIIRKARKFVDIQQDELGVLNGYIDEKISGQ
                     KIIITNGLEEETIDGFVKQNNIVKNATYKGQVYSGLLFPMMQGISLLNTAIVIFFGGW
                     LALNGDLERTAALGLIVMFVQYSQQFYMPLTQISSQYSLLQLAITGARRVSEVFAEEE
                     EVERENLQTIDGINKGVKLDHVDFAYDPAKPVLKDVSIDVSKGKMVALVGPTGSGKTT
                     VMNLLNRFYNVDGGAILFDDIDIRDIRLDSLRKQVGIVLQDSVLFTGTIRDNIVFGKP
                     EASDDEVINAAKQANIHDFIMNLEKGYETEISDENNIFSVGQKQLMSIARTIITNPSL
                     LILDEATSNVDTVTESRIQKAMDNVISGRTSFVIAHRLKTILDADHIVVLHQGEVIEQ
                     GNHDELMKAEGFYSELYHNQFVIE"
     gene            complement(31825..33546)
                     /locus_tag="U0290_000561"
     CDS             complement(31825..33546)
                     /locus_tag="U0290_000561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300612.1"
                     /translation="MKVLFHHLKKYKLQATLSTLFVVVMVISQLWQPKLLQQVLDAIM
                     KDDMDEISSIGALLIGIAAVGLIAGILNTILSAKVAQGVGADIRESSFRKIQTFSFSN
                     IEKLSTGNLVVRQTNDITQVQNLVMLSLQSLTRIPIMFIGAFILAMFTLPELWWVIIV
                     LVVLVVLIVVFTFGSMGKHFAIIQKLIDRVNSIAKENLAGMRVVKSFVQEDNEISRFT
                     TVSDKLTRHTIIVGTLFSVMIPAFMLVSNLAIVVSIFFVGDMAADNPEVIGAIASFMN
                     YLMQIMMAIIIGGMLMMMASRALISLKRITEVLETEPDITYNESAPEQDLEGTVEFRN
                     VSFKYDGDDTPALEDISFKASVGEMVGIVGATGSGKSTLAQLIPRLYDPTEGEVIIGG
                     TNLKDINKKTLRSTVSFVLQRAILFSGTIADNLRHGKKDATAEEMEHASKIAQAKEFI
                     DKQAKLYEAPVSERGNNFSGGQKQRLSITRGVIGSPKVLILDDSTSALDAKSEKLVKE
                     ALNKELDDTTTFIIAQKISSVIQADKILVLDKGKLVGVGSHKELLKENETYREIYDTQ
                     KGKEVTA"
BASE COUNT        10587 a         5898 c         7184 g         9989 t
ORIGIN      
        1 aaattttctt tagggtatta ttgcttggat atgaaaactt ggttatctat tggggctcct
       61 ttgttttaat ctatttcatt ttaaatttaa ttacaaataa gatactgtta cctaggggag
      121 gaataatcga aaatagttaa gggtagaatg gttttaacaa aacccattga cagcgatttc
      181 atatggtggt actatatcca tgaggcttgt taccggtaat gcgggcaata ccagatatta
      241 gtttttttgg ctgatatgtg tggtattgct ctttttattt tgcttcaaat aggtggtgat
      301 ttgtttgaga attgagagga ttttaaataa taatattgta agtgcgattg acgaggatgc
      361 gcaggaattg ctgattttgg gaaaggggct tggctttaat tctaaagttg gcgatccaat
      421 taatgaatcg aaaatcgaaa aagtttttga gttgaaagat gacacaatgg ataagtttaa
      481 aatgattgta aatgaaattc caatacaatt tttagaagta actgacgata ttgtgaagct
      541 tttcaaaatg aaaacgacga aagatattag tgatgtcatc tatatttctc tttcggatca
      601 tctgtacttt gccacgcaac gtttgcaaga aaacgtggtt atcgaaaatc cgctctcgtg
      661 ggaagtgaaa cgcttttatc aggaagaata cgcagtggcc aaagaggctg cgaaaatggt
      721 ggaaagtaag cttgaaatag agcttcctga tgcagaaatt tctaatatag cgctacattt
      781 tgttaatgcg gaagtagata gtgatatgaa cgacgtcaca cacattatgc agttaattca
      841 agaaattatt tctattatta aatatcattt taacattgaa tttgatgaag aaagtacgaa
      901 ttattatcgt tttatgaccc atctgaagtt tttctgtcaa cgcgtaatta ttggcgagac
      961 aattgacgaa atggatgaat ttctttatca aacagtgaag aaaagtagag gcgctatttt
     1021 cgaatgtatt gataaaattg gtgtgttttt ggaaaagaat tatcaattta cgatgagtca
     1081 ttcggaacag ttttatctgg cgcttcatat tgaacggctt ttaaaaagaa aaaataacta
     1141 ataggcttgt taccgcgatt tgcgggcaat acctggatga ttgtatgctt ttttaggtgc
     1201 atttcattca ggtttttcta ttatatttag gaggattagc atggactaca atcaattagc
     1261 aaaagaaatt ttacaggcag tcggtgggaa aaataatgtg aatgaagttt atcattgcat
     1321 taccagacta cggtttcaat taaaagatca atcgaaagta aatgaaaaac aattaaaaga
     1381 tttggataaa gtgatgggga cgaatgttgc ggggaatcaa ttccaagtaa ttatcggaaa
     1441 tgacgtgcct aaagtgtttg acgcattagt gacagaaaat cctgcttgga aaaacaaaga
     1501 aacgacaaat aaaacgacac ggcaaaaagg aataaaagga tttttctcga atatctttga
     1561 tgcactttcg ggcgtgtttg caccaattct tcctgcgatt gcgggagcag gtttaatcaa
     1621 aggtttcatg gcattatttg tttcacttgg ttggttagca acagatacag aaacttaccg
     1681 tatcttgtta gctatcggtg acggggtatt ttacttcttg ccaattttag ttgctgtaag
     1741 tgccgcgcgt tactttaaag cgaatatgtt tgtcgcgctt ggaattggag cggcgctact
     1801 ttatccggat ttaacggctt tacttagtgc ggggacaacg ccacacttta ttgggttacc
     1861 agtaactcca gtgacgtatg cttactctgt tattccgatt ttacttgcaa tttggattat
     1921 gtcttatgtg gaaaaatggg tggaccggat tattccaacc tcgttaaaac tgttgtttgt
     1981 cccattaatt acaatgttta ttgttgttcc tttgacgctt gttgttattg ggccactagg
     2041 tacatttgtt ggagacggtg tatctggcgg aattaactgg ttattaaata atggtggagt
     2101 tattggcggt atcttgattg gtggtgccat ggccattatc gttatgactg gtatgcacta
     2161 tgcaattgtt ccatttgtta ttagtaattt agcaaaatat ggttatgata aatttttacc
     2221 gttaacttat atttccaata tgagccaagc gggagcgact ttcggtgtat ttttccgggc
     2281 aaaagataaa aaactgaaat cattagcatt ttcaactggt ttaactgcat taatgggtgt
     2341 cacggaaccg gcaatgtacg ggataaatgt ggtatataaa cgtcctttca tggcgtcgtt
     2401 aattggtggg gctgctggtg gtggctttgc aatgatgttt ggtgtaaaag cgtatgtctt
     2461 aactggtaac ggtggtattc ctggacttcc aggtcttgtc ggagatactt ttgtttatgc
     2521 attaattgcg atggccttag catttatcgt ggctttaatt ttctcttata ttttcggtat
     2581 tgatgagcaa atagtagaag caactcctgt agcagaaaaa atagcagctg ggacagaagt
     2641 tttgcaagct ccagttactg gtgaattagt aaaaatgagc caagtaaatg atactacttt
     2701 tgcagatgaa attatgggta aaagtattgc gattaagcca aatgaaggta aactttatgc
     2761 tccagctaac ggcacaatca tttcgctttt caaaacaaaa catgcgattg ctatgcagtc
     2821 agataatggc gctgaaatat tattacatgt aggcattgat acagtgaagc ttgatggtaa
     2881 ttacttcacg gcacatgttg cgacgggtga tgtagtggaa caaggagatt tattagtaac
     2941 gtttgatatg gaaaaaattg cagaaaaata tgatacaaca acgatgatgg taattacaaa
     3001 tactaatgaa tatgctttgg tagaagctaa ggatagtgga acggtaacga aagggaatca
     3061 agtaatggaa ttaaggagtg agcaaaatga gtaatacgaa gtttccagat ggctttatgt
     3121 ggggcggggc gaccgcggct aaccagtttg aaggtggtta taatttaggc ggaaaagggc
     3181 ttgcctgtgc ggatttattc actggtggaa cgcatacaga gccaagaaga attaccgcac
     3241 aattagaaga atccactttt tatccaagtc atgaagcagt ggacttttat catcattata
     3301 aagaggatat taagttaatg gcagaagctg gatttaaagt gttccggatg tccataaact
     3361 ggactcgtat tttcccgaca ggaaaggaag cagagcctaa cgaggaagga ttacagtttt
     3421 atgaagatgt ttttaaggag ctgaaaaaat atcagattga accgttagtg acgattgctc
     3481 attttgatat tccgctagca ttaacgaatg aggtgaacgg ctgggcgtcg cgtgatttga
     3541 ttgattacta tcttcattat tgtgaagtga tttttaaacg ctataaacat ttagtaaaac
     3601 actggttgac gttcaatgaa ataaatactg caacaatgga aattgggaat tatttatcgc
     3661 ttggcattcg tcatgcggag ggagatttcc ttcatcaaaa agatgaccca acagtgagat
     3721 atcaagccct tcatcatcaa tttgttgcta gtgcaaaagc ggtaaaacta ggccatagca
     3781 tcaacccaga attcatgatt ggctgcatga ttgcttatat gccacgctac ccgcgtactt
     3841 gcgaaccaac tgatgtcttg ttggctaagc aaacggaagc aatgcacagc catttctgcg
     3901 gcgacgttca tgtcaaaggg tattatcctt tttatgcaaa aacattcttt aaagataatg
     3961 gtattgagct tgaatttgac ccagaagatg aacaagtttt gcgagaaggc acggttgatt
     4021 tttatacttt tagctattat ttaacgcttt gtgcatccaa cgatcctgcc tataaaaatt
     4081 cgggaaaaag tgttattgga ggggctgaaa atccttattt aaaaacaaat gattggggaa
     4141 tgcagacaga tcctgtaggg cttcggattg cactgaatga tttatatact cgctataata
     4201 ttccgcttat ggtagttgaa aatggtttag gagcctttga taaattggaa gacgatggga
     4261 cgattaatga tccgtatcga attgattatt tcaaagaaca tattcttcaa atgcataaag
     4321 caattcaaga tggtgtagat ttgattggat ttactatttg gggttgtatt gacctagtga
     4381 gcgcatctac aggggaaatg gccaaacgtt atggtattat ttatgtggat aaatacgatg
     4441 atggaaccgg tgattattcg cgtaaaaaga aagcatccta ttattggtat aaagatgtga
     4501 ttagttcaaa tggtgaaatt ggattgagag agtaatataa aatcccagct acgaaactag
     4561 tagctgggat ttttttattc aaataagaaa tctaaaatct tatcaccaat ttttttcttc
     4621 tccccttgat aagggaagca gtgcatgtgc atcgcgggat tgaaattaag ctcgatgata
     4681 gcatgcttat cacggtcgat tgtttcacgt ggaacaatta tgtctacgcc gcaaattttg
     4741 gcgtcaagta cttgtgtcgc acgaatagct atctctttga agtaatcgtc catctcttca
     4801 gtatagtcaa tgctgtctcc acctgtgctg acgttggagt tttcgcgaag gtagataatc
     4861 tcttctgctt taggtatgct gtcccaagaa aggttttgca tagagagcat gagcgtttct
     4921 tctggaccag tacggatttt ttcaagtggt ttcaaatggt ctgttccgcg caaaggatca
     4981 gtgttctttt cttcaaccag ctcgcgcact gtatggattc cgtcgccggt tacgttagcg
     5041 gggacacgtt ttagtacagc ttcaactttg tcgttaataa ctaagaagcg gaattcgtcg
     5101 ccaggaatga actcttcgat aataacggag ctatcatagc taaatgcgat atttaaagct
     5161 tcttggtaat cttccagcgt gaatttattt ttaaaaatac tgatacccca cccgtagttg
     5221 gtggattttg gtttaacgac aatttgttta tcctcaaata gggagaaagc ttctagtgca
     5281 agggcttggt cgctaaaact gtcgccaaat ggaacgcgaa tatcatgttc tgcaagtaca
     5341 agtttagtaa ctactttatt ttccatcatt aaaacggaaa cgtagttgtc tttggatgtt
     5401 ttgctcgctt gttttacata ctccacatgg tcgccttttt ggaagcgaag gaagttttcg
     5461 gcccggtcta atacatcgac tttgatgccg cgcgcgatgg cgtctttcca aatgatttgg
     5521 gtggaaagct ccatgtcttc tgcgccaatc aatttgtagg ctaaagcttc ggtttcttcc
     5581 atgtaagttt tggcttggtt taaatggaag tcaacgtagc cttcttttgt tacttgttgt
     5641 ttcacttgtg cagcaatcgt tttttcaggg tgtagcagac gttctttttg tttttcgatg
     5701 attgcttgga gtttggtgtc ttctggtcgc aagctttgga tgaaatcgct catcttatta
     5761 agctctaaaa gcccggcctc tacgacagat atttcttcat tatcacaatt tttaagggca
     5821 ggttgcgcga gaccatttag cgcaatatta ttttcatttt catcggctaa ttgttggttg
     5881 ttggagcata attcgcgatc ttctgaaagc aaacctttaa ttaaaaatag gtgaataaaa
     5941 gcaagctcgt ctttagaaat accattcgac tctaatggat tcagatcaat agagcgaatt
     6001 tctaaatatt ccacgccgtg ctccgctaaa ctttcgactg tttggtcggt atgcgcattt
     6061 ttcaaacgaa tcgggttgta aaattcacgc atactctcga ttttccctgc ttcgatatag
     6121 ttagagatgc tagaaatata agcgtcgaaa gaattgtaat caacgtaaag agcttctttg
     6181 tttttataac cagcattact atttcgaaga gaaattccat cacgaagcgc gctactaccg
     6241 tccggaaggg attcatcgtg cttcgttttc gagaaatcag caaggtaaac cggacttgcg
     6301 ccagttaaat aaataagcaa ccagcgattt ttcataaagt attttgcgac ttttaaatat
     6361 agccgatttt taaaatcttg ctttgattct tctggaagac taattttgtc ataaagcccg
     6421 tcaattaaag cttctgggaa tgagaagtta taatgaatgc cagataataa ttggattttt
     6481 ttaccgtagc cttttgctaa atgttcgcgg tattttctgt ccgggctatc aggcgtttta
     6541 tattcagcaa ttggaatatc ttcttcggct ggtaaaatgg gtggattgct agacggccaa
     6601 agtagttcgt tttctgagcg caacgaaacg atattatgaa gattttcaag ccattcatat
     6661 acagagtcaa tcgagtccgt taccggggta atcatttcaa tctgactttc cgaaaaatcg
     6721 gttttaatat atgggttatc ctcttttgga ccaaaaatag cgggatgtgg cgtaagagcc
     6781 aattttccat cagaagttac gcgaatattt tctttttcta aaccaaaatg tccagaaaat
     6841 aaaagcttcc ggagcttagg gtcttcttta aaagaatcaa gcatggtcat atcaagtttt
     6901 atcatgtttt cacctcaggg gttttaaata agttcatata gggatatttt accgcaatat
     6961 gtgaaattag tataatgatt ggtttgtaac tttttatagc gaattggtag aaaattttta
     7021 aaaatgtaga aaaaatattc cggagcttat ataatgagtg aaagaggtgg aataatgaaa
     7081 attcggaact taactaaaaa gatggacgat aacttggttt tgaaggatgt ttcatttgat
     7141 ttaaaagcag gggagattac tgcattaatt ggccgcaatg gcgttgggaa aacaactcta
     7201 ttttcaacga tgacgggaat ttatttgcct gatgagggcg atgttttctt aggtgaagag
     7261 agtattttta agcacccgga agtgaagcaa cagctgtttt tcttggaaga taatatgaat
     7321 cattttaata catatagtgt acagacggtt gttaagatat atcgacaaat ttatacgact
     7381 tttgatgagg ctttttttaa tgaattaatg cagcgatttg aactgccaat gaaggctaag
     7441 ttaatgtctt tttcaaaggg acggaaagcc ttatttttta ttattttagc tgtttcactt
     7501 aatgttcgat tcttgctgct agatgaaccg atggatgggc tagatatcat tattaaaaag
     7561 cagattttag caacgataaa ggacacggtg aaaaaacgag gaacaagtgt agtgattgcg
     7621 tctcatcgtt tggaagaact cgaggctatt gcggatcgag tgattgttct aaagggcgcg
     7681 agcgtggaac tggattatta tttagaagat atgcggaccg atgcggtgaa aatacaagtt
     7741 gcatttaaaa cgaaaaaaat acctgatttt gtgaaaaata acgcgcaatt attgtatcgt
     7801 aatgggcgga tttacacgct tctagtgact gaaaatgcta gcagttttct tgccgaattg
     7861 cgtttagaag aaccggtttt gctagaagaa atgtcgatct cgatagaaga cattttcacg
     7921 gtgcatttag caaatgataa aatagattat tacgagattt aaaacagaca ggagggacaa
     7981 ggctaataat gtttaatcga ggtttatggt accgagaatg gcgtaatatg agatggatgc
     8041 ttttgggtgt tgtgatacta tttttcttag gaattacttt gggactaatg tcagacgcag
     8101 atagatggaa tagtcaaaaa gagtactacg aatcaagtga gtttttaaag caacagaaag
     8161 aaaatcctga atttaaaact tctgatgagg aaatgaaagc tagtttgaca gtggcgtatt
     8221 tagcggttcc aatgtataca aattttgttc aagatgagtt tgtagattac atgccattta
     8281 tgttttattt tcaagtagaa atgtttttta cattgattaa ggtgagtgtt tttattttag
     8341 gggttttggc agttattttt gagcgctaca caagagcgaa tcgttttacg gcatcattac
     8401 catataaacg gacgcacata gttggggtta aaatgatgat gggaatagcg accattgggc
     8461 tgagttatct tatctcgatg ggaattgggt tgacatactt catgtcgcat gttccaaaag
     8521 aatatattca attagatgca ccaaaatttt gggtggatat agttggtgga ttatttactt
     8581 atttacttat atttttagta gctattttaa tcggtttatt gataggttcg cctattgctg
     8641 cggcttttgt ggcatttggt gtgatgttac tgccgagcgt gttaaatcct actttagata
     8701 acatgtataa ctttatttgg ccgcatggcg gagataaagg gatgtctaaa ctgctacgat
     8761 ttgaggatta tgtgaacata ttttctccgt tttcgtttga gtccgcctcg tttggggctg
     8821 tgatttttag cgtaatatta agtgtactca tggtggttgc tattttaatc ttatataaga
     8881 agcagcatat tgaacgaagt ggttatttat ttgcattttc ttgggttaaa tggccgtttt
     8941 tagtgttgtt ttcgttattt gttgggatga ctgcagctaa tttggcagta acagatacag
     9001 agcttggttt cgttggctat ttagcttggg gaattggcgc gacgattggt agttttattt
     9061 tagcactcta cattttaaac aaaatgcgcg ggctttttca attgtctaaa acgaattaaa
     9121 aaaatagctt ttttatagca ggtaagtccg gtataataga ggatagaatg agcgagggag
     9181 gatttagcat tgacgacaga aacagaaacg attaaaccgc agttagctga attgaaagct
     9241 aatttaacga agcggaactt gcaatatgtg atggaagtag aaaaacattt gcgagaaact
     9301 cattacagcg cagaacaaca agagattatt gtttatgaaa tgagcgaaaa gattttagcc
     9361 gaacagaaaa aaggcataac agcgagaaaa ttatttaatt taacaccaac agaatatgtt
     9421 gtttctttag atgtgaaagc tgctacagtg gagcaaaata cggacaaatg gtggctagta
     9481 cttgacggtg gactccttgt acttggagcg atgatgctga tttccggaat tagtgcttat
     9541 ttccaaaaaa acgcgcagac tttaggaatt atcgtgttat taatcactgc agttgtcggt
     9601 ggtttcgcaa tgcttatctt gcgtaaatac gcttcaaaca tgcgtgcagg ccaaaaaggt
     9661 ggaacgataa aatacttact agtagcagtt ggagtcattg cagtgtggat gtttgtaatg
     9721 acgattgtac aagtaactat tcctccaaat atcaatgtag cgttaagtcc gattgttaac
     9781 acagttggtg gtgcaattat tattgcccta cgtttctatg tgaagaaaaa gaaaaatatt
     9841 ccatccttat aataagatgg acacggacag gtgacctaga ttgcataatg cgagttgggt
     9901 cgcctgtttt tatttcccgg gaaatactga tacagatgag gtgaataaac ttatgttttc
     9961 gtatgaagtg attagacaat ttacagagac agagcatcat ttataccggt acataatgga
    10021 caatcgggac aaagttatgt ttatgagagt gcgcgagctt tcggaagtga cgcacgtctc
    10081 gccggcttcg attgttcgat ttacaagaaa attaggctgt gaaggctttt cggaatttaa
    10141 agtgaagcta aaacaagaag cgactcgtga ggtaaagaaa aaaaccgcgg atacagtgga
    10201 agttttagag gaattctttg aacgaacaat gaaccgtgat tatgatcatg tgttagacgc
    10261 ggcggcggag atcatcaatg aagccgattt agtcgtgttt ttcggaattg ggacttcagg
    10321 gattttggca gaatatggca gtcgtttttt ctccaatatg aagaagcgga ctttttatat
    10381 taaagatcca ttttatccta acccgggaga gcaatttaaa aataaagcag tgatgattat
    10441 cctttctgtg tcaggcgaga cggatcaggt gcttgagcag gcgcaaaata tgcagcagta
    10501 tggcagtcgg attattagta taaccaatac gagccacaat acgctcgcgg gcttgtctga
    10561 tgttaatatt ccgtattatg taactcaaga aatggttgat aagacgaata ttacgacgca
    10621 aatcccggta ctttttttac tggaagcgat ggcgaagaaa aattataatc aagagcaaga
    10681 agaataataa aaagcgtgta ggttttcatg acctacacgc ttttctttag cttatttttt
    10741 tatatacatg cacgaactca gtgacaactt ctcttaaagt ttcggttgtg atgagtaagt
    10801 cttccgcatg gattaaaagt aattggattt ccactttttc accggaagct tctttttgga
    10861 ttagcttatg atgctcgtgg tgcccatttg caagagtttc gctaccttct tgtagttttg
    10921 cttctgcttc ctcgaaattg ccttcacgag ccgcacgaag cccttctaag taactgcttc
    10981 tcgcagaacc aacttggcta atcatgccaa aaattactgt ttccatttca ttcatgtcta
    11041 ttttcctcct gtaaaaagtg atacactgcg ccgagtaggc cagcttggtt tttatgtgtt
    11101 gctgtttcga taattgtgtc acgcagccca aagctctcca tatgatgctt tagctccgtg
    11161 ataaaagtag ggcgacttgt aattccacca ccaataaaga tatgcgttgg atcgaacaag
    11221 taaattaaat tataaagccc cgtacaaatt ccagtataaa actcagtaat aagacgttct
    11281 gagacggcgt cgtgtccatc atacttagca aaaatttctt cgccagtaat ctcttccaaa
    11341 gggcgcccag taagttccgc gtattgtctg cgaagaacaa gcattgtggt agtctcattt
    11401 agcgtatatt tgccaggacg gaaagcccct ggacgttcac taaacatata accaaactcg
    11461 ccagcccgga aacgaccacc acgaactaat gcgccattag aaaaaatacc gccgccaatc
    11521 ccagttccga ttgttagaca aagaaaatca tccaaatttt gtcctttacc aagccatttt
    11581 tcggcaagaa gggcgcaatt ggcgtcattt tcaatggcaa caggaattcc ggtttccgct
    11641 tcaagccatt ctttcaaatt aaagttatca aatctacgga tagcgccgcc cattgtaata
    11701 agtccggttt ttgggttcac atagccaggc gcgctgactg caattcctgt cacgtccgta
    11761 ttttcagcaa gaaatagctt catttctgct aaaatctggt cgccatcact agcgattatt
    11821 tcggctgatt ttgttagtat aatttcacca tgcggcaaaa cgacccccat tttaagggcc
    11881 gttccaccga tatcaaaagc tgcaattttc attttgtcac atcctattgt tccgttgagg
    11941 ctgttgcatt tttgtccatt gcagcatcac tcgcggcaat tttgttagat acaagtacga
    12001 atggtagata aatgactgtc gcgacggcta gacagagcaa gccgaccaga agcgcgagcc
    12061 agtttcctcc tgtaccaaga aatggaatca gtggtcctgg agttgtccaa ggcacttgat
    12121 aggcgacagg tggaataagt tttgttgaga taaagaagta accaattaat gtattgattg
    12181 ctggtgtaat gatgaaagga ataaccataa ttgggtttaa tacgattggt aaaccgaaaa
    12241 taactggttc attgatgttg aaaatccctg gtgcaagaga aagtttcgcg atatcgcggt
    12301 agtctgcacg acgagaagcg ataaagatag caatcagtaa acctagagtc ataccagatc
    12361 cgccgtagtt tgcaaatccg tcatttaggc cagcccatgt tgctgggtat ggagctcccc
    12421 aagcagaacc gtgctgtgct acgtaagata agttgtctaa gtttggttca gtgaagatgg
    12481 tgtcacgaat agccgcaaca gtgttaggcc cgtgaatacc aagaacccaa agtaagttag
    12541 aaacaagccc gatgataatt acagagaata cgttagttcc catgtcttta agtggcgctt
    12601 gaataactgt gtaaacaagg tcgtttaaac cttctggagc gattaaagtg attaagtagt
    12661 taatgacaga gaaaagaata gtgatgatga taactggaat taatacttta aaagaacgag
    12721 caactgctgg tggtacttgg tcaggcattt tgatcattaa acgaggggat ctagctagac
    12781 ggctaaatac ttccccagta ataatcgcta caataatagc aacgaaaaga ccttgtgctc
    12841 ctaagaattt gattgtcatg taagatgcat tgtcaactac tgtgtaaggt gtatacacga
    12901 taaagaatgc acctatcgag gtaagtccac agagcaaatc atcctgttta aagaagatgg
    12961 cgagattccg tgcgactaag aatacgatca gaatggccat aatattggtc gaaccttgca
    13021 ttaccggcga aaatacagcc tgtgcatcgg ctaaattagg gaaaattttc cctaggaata
    13081 agatttttgc aataaagcca tctggtgata atactgcgaa gttaatcaaa gtgataattg
    13141 aaccagccat aattaatggg aaaactaaaa taaatgcatc acgaattgct gcaatatggc
    13201 gctgcgagtt caatttattc gcaactggta ctaaaacacg ttccatgccg tgttcaaatt
    13261 ttgacattat actcatttta aaacctccct attttgaatg aatctccctt aaccaatctc
    13321 cgcgaaagct ttttcaagaa cggctttccc gtttaacata ccataatctt tcatatcgat
    13381 aacaataaca ggaatgcgac cctgtacgag ttcatctact tgcggttttt ggtaacggac
    13441 ttgaggtcca agcatcacga tatccatttt gtccacaacg ctgctagctt ctgatactgg
    13501 taatgcttcg atttcaattt cttccccaat agaggttgcg tgcgctttca ttttagtaac
    13561 gagtaagctt gtcgacattc cggccgcaca tacaagtaat atttttttca ttaaaatttc
    13621 cctcccaaaa tggttgaagc agagagaaca aggcttattt gccctgttct tctactaaat
    13681 tagctccgtt tgcttcgatg gtctttttat accagtaaaa actatctttt ttatagcgtt
    13741 ttaattcttt ttcatcgttt tcgtcgcggt ctacatatac gaaaccgtaa cgtttttggt
    13801 agccgtttaa ccagcttagt aaatctgtga agctccaagt gcagtaaccg agcatctcta
    13861 cgccgtccgt gattgcttct tggattgcta gagcatgcgc gcgaatgtat tcaattcggt
    13921 actcatcatg gattttatgg tcttccgtca agctatcata ctcaccaaga ccattttctg
    13981 taatcatgat tggtaattta tagcggttag taattctacg taagccaatg cgcaagccag
    14041 ttggatcaat atcccagtcc caattcgttt tctctaagta tggattattg gtgtttttgt
    14101 ataaccccgg tacaccagtt tcctcggaag tgcctttttc gccagttgta ttcattttcc
    14161 cagaaccaac gccgtctttc ccattaaatg catgagtcat tgagcggtaa tagttaactc
    14221 ccatgaaatc aggttttcct tttttcagaa gctccgtatc gcctggtaag atttccggtg
    14281 caagaccgtg ctcttctagc cagttccaag tagcagtcgg atattcaccc catgtgtaaa
    14341 catccatcca gaaatgggca ttgaattctt cggagttttc agaagctaat acatttgctg
    14401 ggttagcatc gatggagtaa cttggtccat aagcaaaact tggtccaatt tttccggatg
    14461 tacctagctc gcggaattta gcaattgcag aagcattcgc caagttcgca ttgtgatttg
    14521 ccgcaaacat acgcttgtcg tcagaaacgc caggtgggtg atacgctaat ttgtaaccgt
    14581 gtgagataaa tacgttctgt tcattaagtg ttacccaata tttaactcgg ccgttaaagc
    14641 gttcgaatag aagggcagcg tagttagtga aatcttctac gacttttcgc gactcccatc
    14701 caccatattc gtcttgaagc ccttgcggaa tatcccagtg ataaagtgta acgactggct
    14761 caattccata agaaagaagt tcatcaatca aattatcata gaatttaagt cctgcttcgt
    14821 taacttcccc gttaccatgc gggataacgc gactccatgc gacagagaaa cgatatgctt
    14881 ttaggccctg ttcagccatt agtgcgacat cttctttata acgatggtaa ttatccaccg
    14941 ctacatctcc gtttgtttct ttgaatgttg ttccaggaat acgaacaaat tcatcccata
    15001 cagatggtcc tttgccatcc tcatcccagg caccttctac ttggtacgct gcagaagctg
    15061 atccccatag aaaatctttt gggaaaggtt tcaacttatt atgttccatt atggcacctc
    15121 caaaaattat gtgcgattag tctgttttag ttttgcttgc cttattaatg taaacggttt
    15181 cgactaattg gtaaatagat tttggtgctt tgggttcgtg tttcatatca atggtataag
    15241 tttctgagct gaaacgctgt gtttcgtgca tgtgattgga agaacaattg acatttgggg
    15301 aagtatccct tattctatat gtattaatga aaagaggtga gatgacatgt ttcttttgaa
    15361 tgcgcgaact agtatagcta aatttttgta tattgtccgt gcaatttttt ccggtattgc
    15421 agttacattg gcgaagtctg cccaaaaaac tgtataacta gaaaaaatga gagaagcatg
    15481 gagtcacgca atcggtttgt atagtgctaa attagtatta tacttataat tggcgtcggg
    15541 cgcttgtctg acgctttttt tgttgtctga aaaattgttt cacgtgaaac aatttgccat
    15601 gcttccttgg ataaatggag gataaaatga caatagtagc aatgaatgat gtagttaaaa
    15661 gttttaccgg agatattatt ttagagaaag tatcacttca attagaagaa ggtgagcgcg
    15721 tcggtttaat tggtcgtaat ggcgaaggga aaagtactat tttgaagatt ttaaaaggaa
    15781 ctgagggcgt tgatagcggg attgtgacga gcaaaaaggg cgcgaaaatt gggcttttag
    15841 agcaattatc gacggtggat cccaatataa tagtagaaca atatttacga actagttttg
    15901 gtgagttaga ggagctggaa aaagaattac gagcattaga aggagaaatg gcaacaaatt
    15961 ccagcgaaaa attaatgaac cgctacggag ataaaatggc tttatttggc gagcttggcg
    16021 gctatgagat ggatgccaat ttgaataaag tggtgaatgg gcttggtatt ggattgctac
    16081 tgtcgcaacg atggggagac ttgagtggtg gtgagaagac gaaggctgca ttagcgcatt
    16141 tattattaca gaaaacagat ttattactct tagatgaacc gacgaaccat ttggatttga
    16201 tggcggtaga atggctgacc gcgtttttac aacattattc gggaaccgta ttagttgtat
    16261 ctcatgatcg ctacttttta gatgaagtag tcgggaaaat ggtggagctt gagaaccgcg
    16321 aattaatcgt ttatcatacg aatttttctg gatatttgaa agaacgagaa gaacggctat
    16381 tgcgggaatt ccaagattac aaagaccaac aaaagaaaat caaaaagatg cagcaagcca
    16441 tcaaacgatt gcgccagtgg gcaatgcaag ccaatccgcc aaatgatgcc atgttccgaa
    16501 gggcgaaaaa catggaacgc gcattagaac ggatggaaaa agtaaagcgt ccagtgttaa
    16561 cgcaaaaaca aatgcaatta caattcgatg aagctggtcg aagtggacaa gaagttgtgg
    16621 ttatggaaaa cttaagcaag tcatttagcg aaaaagcaat cgtacaagat gtttctttgc
    16681 aaattaggca aggagaacga gtagcgatta tcggtgaaaa cggcgccggc aaatctactt
    16741 tgcttaaaat aatggaaggg aaagttgttc ctgatgttgg catgattaag gttggtgcaa
    16801 gtgtgaaaat cgcgtcgctt tctcagcaaa tggaagagct gaatgaaaag ctgactgtac
    16861 tggatgcatt tcgggataag gttgctgtga cagaaggaga agcacgacaa atgctagcag
    16921 gcttcatgtt ttatggagag atggttttcc gaaaagtagg gaacattagc ggcggagaac
    16981 gtatgcgact taggttagcg caatttatta atatgccagt gaatacgctg atacttgatg
    17041 agccgactaa ccatttagat atcgcctcgc gtgaaatttt agaagaagca attcgagcat
    17101 ttagcggcac aattatcact gtatcgcatg atcgctattt tattgatcag ctatgttcta
    17161 aagtaatttg gctggagaat aaacaattaa ccgtttatga aggtaattac agttatgcaa
    17221 ctagtaagcg aagataatcg acttgctgga aatcactttc aaaataaatt agaatgaaga
    17281 aaagaggtga tggtatggag ataacagttg taaaaggtga tattacggaa caagatgtag
    17341 atgtcattgt aaatgctgct aaccccggac ttttaggtgg cggcggagtg gatggcgcta
    17401 tccatcaagc ggcgggtccg gatttattaa aagaatgtca agaggttatt aatcgcattg
    17461 ggacttgtcc tgcgggtgag gcggtcatta cgtctgccgg cgatttacaa gcaagttaca
    17521 ttattcatgc tgtaggtccg atttggaaag acggagagca tcaagaagcg aataaactgg
    17581 catcttgtta ttggaaagcg ctagatttag cggctggaaa agaattaact tcgattgcat
    17641 ttcctaatat ttctacgggt gtgtatggtt ttcctaaaaa actagcagct gaggtagcgc
    17701 tttataccgt tcgcaaatgg gcggaagaag agtatgacac aagtattgaa gaaatacgct
    17761 ttgtttgttt cgatgaagaa aatttgaagt tatacaacaa attaataaac agtgaagtcg
    17821 tttaagataa caatcttagg cggctttttc aaatgtttca cgtgaaacat tttttactat
    17881 attttctgaa taaaacaaca acggaaaacc ttcttgacat agctccaagc ttcttgtaac
    17941 atcatattca ataactaaaa atatacattg gctatttcag catgattata gaagacaagt
    18001 cgcatgatgt ggatattttc caccattttt tctttatgaa aataaggata agatgatgcg
    18061 ttttttctat ataaaaaagc gagtaccaat aaaaaaggag tgtttgcgac ccatgtggga
    18121 aacaaaattt gcaaaagaag gcttaacatt tgatgatgtt ttacttgttc cagcgaaatc
    18181 ggacgtatta ccaaatgatg tagatttaag tgtagaaatg gctccatcac tcaaattaaa
    18241 tgtaccaatt tggagtgccg gaatggacac aattacagaa gctaaaatgg caattgcaat
    18301 tgcgcgccaa ggcggaatcg gtgttgttca taagaatatg agtattgaac aacaagcgga
    18361 agaaatcgag aaggtgaaac gctctgaaag tggcgttatt attgatccat tttatctgac
    18421 tccagatcac caagtttttg ctgcagagca tttgatgggt aaatatcgta tctcaggtgt
    18481 tccaatcgtg aacaacgaga aagagcgcaa actagttggg attttaacta accgcgattt
    18541 acgttttatt tccgattatt ctacagtaat taaagatgtt atgacaaagg aaaacctagt
    18601 gacagcgcca gttggaacta cgctaaaaca agctgagcag attctgcaaa aacaccgcat
    18661 cgagaaattg ccacttgttg acgaagcagg tattctaaaa gggcttatca ctattaaaga
    18721 tattgaaaaa gtaattgaat tcccgaactc tgctaaagac aagcatggta gactacttgc
    18781 cgcagcagct gttggaatta cgaatgatac ttttgtacgt gtagagaaat taatcgaggc
    18841 gggtgttgat gcgattgtta ttgatactgc gcacggacat tcagcgggag ttattaataa
    18901 aatttccgaa attcgccaaa ctttcaaaga tgtagtaatt gttgccggaa acgttgcaac
    18961 agctgaagga gcacgtgctc tttttgaagt tggcgttgat atcgtcaaag ttgggattgg
    19021 tcctggttcc atctgtacga cacgtgttgt tgcaggcgtt ggggttcctc aaattacagc
    19081 gatttacgat tgtgcaactg ttgcgcgtga atttggtaaa acaattatcg cagacggcgg
    19141 cattaaatac tccggtgata tcgtgaaagc tctagctgct ggaggaaatg cggttatgct
    19201 aggaagtatg cttgctggaa cagacgaaag ccctggtgaa acagaaattt tccaaggtcg
    19261 tcaattcaaa acttaccgtg gtatgggtag tttggcagcg atggagcacg gttcaaaaga
    19321 tcgttatttc caagcagatg cgaaaaaatt ggttcctgaa ggtattgaag gtcgcgttcc
    19381 ttacaaaggc tccgttgctg atattatctt ccaattagtt ggcggtattc gttcaggtat
    19441 gggttacact ggctctcctg atttaagaca tcttcgtgaa gaagcagcat tcgttcgtat
    19501 gactggcgct ggactccgtg aaagccaccc acatgatatt caaattacaa aagaagcacc
    19561 aaactatagc atttcttaag gtcgaaaaag caggaatctc ttccaaaaga ggtttctgct
    19621 tttttatttc tactataaaa ataagaaagc tgcgagaaaa cacgaatttc tccaaaaagc
    19681 ttcaattaaa gtcataaaac cgctatactg tttctataga ggaggcgtga aaaaagataa
    19741 tgatagagca agcaagagct attttacagc aaaactttgg ttatcaagat tttcggaatg
    19801 gacaagttga cgtcatttcg aaactttgcg cgggagaaga tacgctagca atcatgccaa
    19861 cgggcggcgg gaagtcactt tgttaccaaa tcccagcact tctttttgac ggtttgacca
    19921 ttgttgtttc tccactaatt tcacttatga aggatcaggt agatgcgcta gtctcagagg
    19981 ggattgcagc tacttttatt aatagtacac tgactaatag agaaatagat attcgactgg
    20041 atgctgcatt ttcaggtgag ttaaagatgc tttacattgc tccagaacgc attgaaacgc
    20101 caggttttca gcgtttaatt gagcaggtac ctatttcatt atttgcgata gatgaggcgc
    20161 actgtatttc gcagtggggt catgattttc gccctagcta cctgacgctg tgcgatagtt
    20221 tggataaaat gaccagacgt ccgctcgtta tcgcgcttac tgcgacagcg acgcaggctg
    20281 tttcagacga tatttgccga ttgctaaaaa taggagcaga ttcagtcgtt aaaactggat
    20341 tttccagaga taatttggct tttcaagtag tgaaagggca agataaagat aagtatttga
    20401 ttgattattt aacaaaaaat gtaacggaat ccggaattat ttatgcttcg actcggaaag
    20461 aagtagagcg gctgcacact ttcttgctaa aaaaaggtgt tgaatctggt atgtatcatg
    20521 gcggaatgac cgatttagca cggaaagact ggcaagagaa gtttctatat gatgatattc
    20581 gagtgattgt ggcgacgaac gcgtttggaa tgggaattaa taaatctaat gtgcgttttg
    20641 ttattcatta taatattccg cgcaatattg aagcgtacta tcaagaggcg ggtcgtgctg
    20701 ggcgagacgg ggttccaagt gattgtatct tgttgttttc cccgcaagat agccgcatcc
    20761 agcagttttt aattgaacaa tccgaaatgg acgatgagcg caaacaaaat gaattcgcca
    20821 agctacgcca aatgacaggg tatggttata cggaaatttg tttacagaaa tacatcgtgc
    20881 agtattttgg agacgacgag gaaaactgcg agaaatgtag taattgctta gatacaaggg
    20941 aagccacgga cgttacaatt ttagcgcaac aagttttttc ttgtataaaa agaatgggtg
    21001 agcgttttgg gaaagtatta attgccaagg ttttgacagg ttctgctgac cagaaagtga
    21061 aagattggcg ctttgacgaa ctcagtactt atggattgat gaaagatgct tcccaaaaag
    21121 atgtgttaca actaattgat taccttacag cagaaaaata tttacaacca actgatagcc
    21181 aatttccttc cttaaaactg acggatagag ccgtttcggt tttacgaggt gagctaaaag
    21241 tggaaagaaa acaagcgaaa cgggctgaaa aagttaaaat agatgtaaat agtgaccttt
    21301 tcgagaagtt gcgggaagtg cggcgggaac tggcagcaaa acacaaggtg ccgccatata
    21361 tcattttttc agatgaaacg ttacgtgaaa tgtgtgcata tatgccgcaa acggaagatg
    21421 cactgcttga agtcaaaggc attggtgcga tgaaacgcga taaatacggt gcagaattct
    21481 tggctgtact gcaacaagag gcatcgaaat aaaatagaag agagggtttt gacagatgac
    21541 aaaaacatta gtactggcag agaaaccgtc tgtcggtaaa gatatcggcc gggtactcgg
    21601 ggctaaacaa ggtaagaacg gctatttaga aggtggaaaa tatgtagtaa cttgggcgct
    21661 tggacacctt gtaacactag ctgaccctga gcgctacgat tcgaagtata aaaactggaa
    21721 tatggaagat ttaccaatgc ttccagagaa aatgaagcta gaaccaatca agcaaacgag
    21781 aaagcaatat gaaacggtta agaagttaat gaaccgtaca gatataacca cgatcgttat
    21841 tgcaacagat gcaggtagag aaggagaact tgtagctcgc tggattattg attatgcgaa
    21901 aatcaagaag cctctaaaaa gactatggat ctcctctgta acggataaag cgatacgtga
    21961 aggcttcgaa cacttaaaac cagggaaagc ttatgaaaat ctgtatcact ctgcagtcgc
    22021 tcgttctgaa gctgactggg tggtaggaat caatgctacg cgtgcgttga caacgaaata
    22081 taacgcacaa ctttcctgtg gccgagtgca aacgccaacc cttgcaatga ttcaacatcg
    22141 tgaggaagaa attcgtaatt ttaaaccacg tgagtactat ggaattaccg cgctaaccga
    22201 acaagaaagt ttcacgtgga acaatgggca aacttttgat aaagctttag cagaaaaact
    22261 agtaaagtct ttacaagggg aaaatgcggt aatcacagac gtttctatga aagaaaagaa
    22321 aaatttctca ccaggtttat atgatttaac cgaattacaa cgcgatgcga ataatagata
    22381 tgatttttcg gcgaaagaaa cgctgaatat tatgcaaaca ttatacgagc gccacaaagt
    22441 actaacgtat ccacgaacag attcgcgctt tatttcaaca gacattgtcc caacactaaa
    22501 agaacgttta gcggcctgcg gggtgggtga aaatgcaaaa gctgctcgtc aaatcagcgg
    22561 aaaaccaatc aaagcgaaca aatcatttgt agataacagc aaagtgagcg accatcacgc
    22621 aattattccg accgagcaac ctgtttccct cggagattta agcgataaag aacggaaaat
    22681 ttatgacctt gtcgtcaaac gctttttagc agtgctttca gacccatata tttatgaaga
    22741 aacctctgtt aaagctaaaa tcggccaaga agaattcact ttaaaaggta aagttgtcaa
    22801 atcccttggt tggaaaagta tttacggaga gtcgcgcgaa ccagatcaat taactaaaat
    22861 gaaaaaaggc gacactatcc cagttaaacg aatcaattta gagacgggga aaacaaaacc
    22921 accagcgaga tttaacgagg caactttact ttcagctatg gaaaacccat ctaagtacat
    22981 ggaaacaacg aacaaggcgc tcgccaaaac actgggtgag acaggtggac ttggaacagt
    23041 tgcaactcgt gcagacatca ttgaaaaact tttcaatagc ttctccttag aaaaacaagg
    23101 caaggacatt catattactt ccaaaggacg ccaattgcta gaattagtgc ccgaagatct
    23161 gaaatcccca gaactaacgg cgcgttggga acaaaaatta tctaaaatcg caaaaggcga
    23221 actagattat cgtaaattca ctgaagaaat gcgtgactat gcgaaaaaag cagtaactga
    23281 aattaaacaa aacgataaaa aattccgtca cgataacatt acttcacaaa aatgcccaga
    23341 ctgcggcaag ccgatgctaa aagtgaaagg caaacgtggt acgatgctag tttgtcagga
    23401 ccgtgaatgc ggtcatcgtg aatctgtttc aagaacgacg aatgctcgtt gccctaattg
    23461 ccataaacga atggaaatgc gcggcgaagg tgataaacaa atttttgtat gtatttgtgg
    23521 acaccgggag aaactatctg ccttccaaca acgtcgtgac aaacagaaaa ataaaaatgt
    23581 atccaaaaca gatgtagcta aattcatgaa aaaacaaaac aagcaagaag atgagccgtt
    23641 taacaatcct atggcagaag cgcttgccaa attaaagcta gataaataag aatggacaaa
    23701 gcaacccact catattgagt gggtcgcttt gtttgacata gtctgtcgta tacgaaacaa
    23761 taaaagagca atcaatactg aaaaggagat gtttcacgtg aaacataatc aattaattat
    23821 tgaaacggat gtcccagctg aaatgcgcga tggtgtaacg ctttacgcag atatatatcg
    23881 tccagcagac gcgggggaat atccagtttt acttacaagg ttaccttata gtaaatcata
    23941 cgggcttcac tttattcgtc ctaatatttt ggcggagcaa ggttatgttg ttattgttca
    24001 agatgttcgt ggcagatata cgtcagaagg agattttgtt ccatacatag cagaagttga
    24061 cgatggatat gatacgattg agtgggctgc gaacctgcct tatgctaacg gaaatgtcgg
    24121 catgtttggt ttatcttatt atggttatac gcaaatttta gccgcaatta gcgggaacaa
    24181 acatttgaaa gccattgctc caattatggc tcaaaatagc atgacagatg tttttaatga
    24241 ccacgacggc gctttagaac ttggaatgtg ggaaacttgg aatctagagt ccatgcttcc
    24301 aaacatgcta gcccgtactt ataaaacgca agatgaatta gaagaagcag tgaacacatt
    24361 aatgaaaaat ctagacaatt tagacgcact ttatcaattt aaaccttata aagactggcc
    24421 agcaatcggt caaaatgaaa tgccttactt ctctgagtta ttaaattatg aaccaacaca
    24481 taaccattgg caaaaaatcg atgcaaaaag caattatgat aaaattaatg taccaggtct
    24541 ccatgtagca ggctggtatg actgcttttt agataaaaca atcgctaatt ttcaaaatgg
    24601 tcacttgcga ggtcttggag ataagctcat cattggtcca tggacgcatg ctaatttcac
    24661 tcagatgatt ggcgaccgtg attttggaat ggcgggcact aaatggggag aggcgaatat
    24721 gcatgctaga catatagaat ggttcaatca ttggctgaaa aaagagcctt taccagcatc
    24781 agcgcctgtt aattattttg tgatggggtt aaatgactgg aaaacagctg aaaactggcc
    24841 tcctcaaaat gcaaatatga caccattata ttttaaaaat gaaaaagtga gcgcagaatt
    24901 cacacctcct acaacatctt cagaagcaaa atttagctat gatccagaaa atccagtacc
    24961 atcaaacggt ggagggacct tacataaggc actaaatgca gatggacctc gtgaccaaca
    25021 acaaattgaa cttcgtgaag acgttctttg ctactcaacg gagccactaa aagaagcaat
    25081 cgaagttacc ggatcaattc aagtgaaact ttgggccaaa tcagatgcac ctaacacgga
    25141 ttttacagcg aaattagtgg atgtatttcc agatggaacg gcttttaact tagcagatgg
    25201 catcatccgg gcggccaagc aacatggcga caatgtgcaa aataatatta atgaatacac
    25261 tatcgacctt tgggcaacaa gtaatttatt ccaaaaaggt catcaaatcc gcgttgaaat
    25321 atcttctagt aattttccga gatttgatcc aaacccaaat acaggcgata actttattaa
    25381 ttccactgaa agccaaatcg ccaaccagac gatttatcat agtcctgaat ttccatcaca
    25441 tattcttctg ccaatcgttc gctagaaatt ttggtttttt gggcgaaaag ttttatatac
    25501 ggcactacta aatcatggta aaatatgaaa gtatccgtca aaaaaatgaa acttattcga
    25561 aaagggaatt tttatgatag gtttctttat taaaatatag ataaaatgag ttaataattt
    25621 actcaaatga aggagaagtt gcagtgaaaa acataattaa aaaaacaggg attgtaatca
    25681 tggcagcatc ccttgcagta agtggcttct tagtaagccc gaaagcagca caagccgcag
    25741 aagcaccaaa tgtaaatgca aacgcagcaa tcgcaattga agaaagtact ggtaaaattt
    25801 tatattcaaa agacgctgac aagctaatgg gcatcgcatc catgacaaaa atgatggacg
    25861 aatacttact actggaagca attgacaaag gacaaattaa atgggacgac aaagtaacca
    25921 tttctgaata tgcttacaaa gtttcacaag acacatcact atcgaacgta ccacttagac
    25981 ttggcgaaga atacactgta caagaattat atgaagcaat ggcgatttac tctgcaaacg
    26041 gagcagcaat tgctatttcc gaaaaaattg caggttctga aaaagaattt gtcgatgcta
    26101 tgaataaaaa agcggacgaa cttaatctag gcgagcacca attcgttaac gctacgggcc
    26161 ttaataacga agacttaaaa ggcggtcagc aagtaggtgg accgaaagac gaaaacaaaa
    26221 tgacagctcg cggcatggcg aagttagcaa aacacttaat aaatgattac ccagatgtac
    26281 ttaaaaccgc tagtacaact aagaaagagt tccgaaaagg tacatcagac caaattgata
    26341 tgacaaactg gaactggtta ttaccgggct tgatttacgg gcgcaaaggt gtagacggtt
    26401 tgaaaacagg aacaactgat tatgctggaa tgtgcttgac tgcaaccgct gtacaagatg
    26461 gaatgcgagt tatcacagtc gtactccatg caaatggtgg agcgcctggc gagcatacaa
    26521 gtgctcgttt tgatgaaaca aacaaaatgc tcgattatgc ttttaataat ttcaaagtaa
    26581 aagaagtgca aaaagcagga tcaaaagtaa aaaatccttc tacaattgca gtagataaag
    26641 gaaaagaaga tacagtcgga ctagttacaa aagatgcagt gaagctagtt gtaccgaaga
    26701 atggcaatga acctaagtta aatacaaagg taacaatgaa agaaaaaaca atagaagcac
    26761 cagttaaaaa aggtacggaa gttggtaaaa tggaagtatc tctaaaagat ggcgacaagt
    26821 taggctatgt tgacggaaaa caaacagaaa caattgacgt actaactgct agcgacgttg
    26881 aaaaagcgaa ctggttcatg ctctccgcac aagcggtagg ttctttcttt acaggcattg
    26941 gtaattacgt ttctgatggt gtaaaagggt ggtttaatta acagtagaac aattgtagta
    27001 ccgatataaa taaaagagtc gatttcctga attaggaaat cgactctttt attggctaac
    27061 tttagttcaa tggatttctt tcgcggtatt taacaagttc taagaagtag ctttgtctgc
    27121 ttctatgagc tatcgtatca aggattaatc cacaaatgaa gaacagcata cccattatga
    27181 ttaaaccagt tgcaagtaat gcactcggaa attttagtac caagccaatt tgagcaaact
    27241 gaattatgac tggcaaacca actagaactc ctacaagcac aaacaaagag gctaataaat
    27301 tgaaaaataa aaacggacga ctatttttaa ataatcttac aatcgtcata attactttga
    27361 aaccatcaga aaaagtgttt agttttgatt cactaccttc tggacgatca cggtaatcaa
    27421 tttcaatttc tttcactaaa aagcgatttt ccaatgcgtg aatgctcatc tcagtttcaa
    27481 tctcaaaacc agggcttaaa actggcatag tcttaacaaa ataacgatca aagccacggt
    27541 agcctgtcat gatatctctc aaattacttt tgaagatacg attaattgta ttacgtacta
    27601 gtgagttacc aaagtcatga aaatttcttt tattttcttc agtgtaggta ccattactca
    27661 gacgatcacc aataaccata ttagcttcct tattgcgaag cacctctaat atttcatggc
    27721 agtattctgc tggataggta tcgtcaccat cgaccattaa atagtaatca gcatctatat
    27781 ccgcgaacat agaacgtact acattacctt taccttggcg catttctttt cgaacgatag
    27841 caccatgatc tttcgctatt tcaaaggttt tatctttaga attattgtcg tacacataaa
    27901 tatccgcatt tggtaattct ttcttaaaat catcaattac cttaccaatt gtaagctcct
    27961 cgttataaca aggcaagagt acagctactt tctcatttag aattcccatt attctctcct
    28021 taaaattgat tttctttgta attttttaat ttagttgcaa aaaagacaat aggcacggtg
    28081 aaaataaaac tataagaata tctaaagtct gttgctggca ttgcgattgc tatagtaata
    28141 agtgccatta ctacaggtgc aaaaataaga agtttctttt taggacgttg gaggcagacg
    28201 gcagcaattg ctattatgag caatactaat ggaatggctc cttttaataa ataattttgc
    28261 cactcatttg ttgtttttgc ataaatgcta tctgttattt tcttcagact tggagcttta
    28321 gatattgaaa taagtggatt agtagagtca tcaatccgtc tcttatactc attgtagcta
    28381 acagcatctt ttccagttgc atttttgtat tcattttgat agacttcata tcctaattta
    28441 ttaatctctt cttccgataa accttctggg aagaatttgg cgaatgctct cacatcatat
    28501 cttgtatctt gaatattcgc tgaagtatca aagaatactt tataattttc tggagaatag
    28561 aattgccaaa tgactgctgt ttgatctaaa taagccccta cataagtacc gaaattagcc
    28621 gttaagagtt tgaaccaatt tttaatgtat agtccaaaat catcttcaat gacggatgaa
    28681 ttgtatttgg tatcatgctt aattgggtct acagtataag ggttgtaatc ttttttccaa
    28741 ttttcttcag gtaatatgga agtgaaatac tcttttaatt caggagtaaa gtttccatca
    28801 ttgtaaaaag tagccccaat ttgttgggaa ggaattgcta gcgcttggtt taatggatta
    28861 ggttgcgcat taagcccgtt tgtcataacc agaccaaata aaaaattcag tcccaaggtt
    28921 ccaacaagaa taccggtaat aataagacga aagtttttca tgaaaataag caagcacaga
    28981 agcgatacga tgataatcat cattccattg tttcgtaaat ttatacaaac aaaagctact
    29041 aaaacaaaag cgataaggtg ccaccaattt ttcagccaca ttccattaga ttgtactatt
    29101 tttaaaatta aaacggtgaa aagtaatata aaggctgcaa atggaaaatc tttccatgct
    29161 gttgcagaat aaaacattgc tgcagggtaa atggcatagc cgattgaaat acaaacacca
    29221 atccaaatat gcgcgcccat ttttacaaga gtataaatag caaagccaac gattaatgaa
    29281 acaacaatta tttgagaaaa aatgtaactc gaaggtgagt cgtaaatcgc acttgttgtt
    29341 tctatccaca aagtgtgtaa aagcggatgc cactgactat attggcgaat accgtgagcc
    29401 attccccatt ggtaatagga gtcaaatgtc atttttgctg gataataggc tagaaatgaa
    29461 atcatccaga ccacgaatgg aatactcgta aatagtgcga aaaatggcca ttttactttg
    29521 cgattcggtc ttgctttata ttccgttcgc atttcaagta ataaaagtaa aacaaagata
    29581 gtgattacaa gaaaagttcc tgctaaaata atactattaa aaacaaaatt cccgccatat
    29641 ggtccaccat tgaatgatga agccatccaa aataaactaa ttattagtga ggttatcaat
    29701 gttgaccatt gaaattgaaa gtttttctct tgtctaaaat aaagaaccgt taaaactact
    29761 gcaaataaca accagcttaa agttagttta aaggtttctg aataatagct aatagaaatt
    29821 aaacttagta atagtagcaa aaccccaact ataactcttt ttttatttaa cactcttttt
    29881 ctccactccc tatatgagac gttactatcc tttaatatag caaaaaaaag atgctagcgc
    29941 aattgaaatt taaagcgagc ccttacttga aaaagataag gactcgcttt aaatttacta
    30001 gttagacaac gttttgcctg ccagataaat cactctttgg aagagtgatt atttattcaa
    30061 taacaaactg attatgataa agctcagaat aaaatccttc cgccttcatc agctcatcat
    30121 ggttaccttg ttcaatcact tcaccttgat gtagcacgac gatatggtcg gcatcgagga
    30181 tggtttttaa acggtgggca atgacgaagc tagttcggcc agagattacg ttgtccatag
    30241 ctttttggat gcggctttcg gttacggtat ctacattact tgtcgcttca tctagaatta
    30301 gaagagacgg atttgtaata atagttctcg caatactcat aagctgcttt tgaccaacgc
    30361 tgaaaatatt gttttcatca ctgatttctg tttcataacc tttttctagg ttcataatga
    30421 agtcgtggat gttagcttgt tttgcagcgt tgattacttc gtcgtcgctt gcttccggct
    30481 taccgaaaac aatgttatca cgaatggttc ctgtgaatag cacggaatct tgtagcacga
    30541 taccgacttg tttacgaagg gaatctaggc gaatatcgcg gatgtcgata tcatcaaaga
    30601 gaatcgcgcc accatcgaca ttatagaagc gattaagaag gttcataaca gttgttttac
    30661 cagagccagt tggaccgaca agagcaacca ttttaccttt acttacatca atcgaaacgt
    30721 cttttagaac tggttttgca gggtcataag caaaatctac gtgatctagt ttgacacctt
    30781 tattaatacc atcaattgtt tgtaagtttt cgcgttctac ttcttcttcc tctgcaaata
    30841 cttcactaac acggcgcgca ccagtgattg ctagttgtag caagctgtac tgggacgaaa
    30901 tttgtgtaag tggcatatag aattgttgtg aatattgaac gaacataacg attaaaccaa
    30961 gagcggctgt gcgttcaagg tcgccgttta gagctaacca tccaccgaag aagataacaa
    31021 tagctgtatt taatagggaa ataccttgca tcattgggaa aagtaaaccg gagtaaactt
    31081 gacctttgta agttgcgttt ttaacgatat tgttttgttt aacaaagccg tcaattgttt
    31141 cttcttctaa gccatttgtg ataataattt tttgaccaga gattttttcg tcaatgtagc
    31201 cgttaagtac gcctagttca tcttgttgaa tatcaacgaa tttgcgggct tttcgaataa
    31261 tcactgtcgc aataataatc gcaaatggag cagatattag agtaacgaag gctagttcca
    31321 cgttttgttg gaacatcatg atgataacac caatcattag cgcgacgttg gatagtactt
    31381 ggatcaatgc ttggtttagt gtgttggaaa tattatctaa gtcactagtg aaacgactaa
    31441 gcatttcgcc atcattgcga ctatcgaaga aacggattga tagtttttcc atcttgcgga
    31501 aaagtcctat acgcattctg ttcgtcgatt taccagctac ccctgtcata atgatacttt
    31561 ggataaaagt ggcagcagcg aggagtacgt agcagagaat cagcatccaa atgatatgga
    31621 tgaagtcact cttgtcatca acacccgttt gcattaaatt aacaacgtaa tctccaagtt
    31681 cttgaacggc gttaccaata tattgtggtg cttttacttg aaggtatgtc gcaaaaacta
    31741 cagcaattaa aatgacaaaa agttgaggtt tatacccccg cagatagtgc cagaaaaagc
    31801 gactaatttg tttaaactct ttcattatgc ggttacctcc ttgccttttt gagtgtcgta
    31861 aatttcacgg taagtttcat tttcttttag aagttcttta tgggaaccga cgccaacgag
    31921 tttaccttta tctaacacga gaattttatc tgcttgaata acagaagaga ttttttgtgc
    31981 aatgatgaaa gtcgttgtgt cgtctagctc tttattcagc gcttctttca ctaatttctc
    32041 ggattttgca tcaagcgcgc ttgtgctgtc atcgaggatt aggactttcg gggaaccgat
    32101 aacgccacgt gtaatcgaaa ggcgttgttt ttgtccaccg gagaagttgt ttccacgttc
    32161 ggaaacagga gcttcataaa gttttgcttg tttgtcgata aactctttcg cttgtgctat
    32221 tttacttgcg tgttccattt cttctgcagt tgcgtctttt ttaccatgac gtaaattgtc
    32281 tgcaattgtt ccggaaaaaa gaatcgcgcg ttggagcacg aaggaaacag tgctgcgaag
    32341 cgtttttttg ttgatatctt ttaggttcgt tccgccgata ataacttcac cttccgttgg
    32401 gtcgtaaagt cgggggatta gttgggcaag agtggattta ccagaacctg ttgcaccaac
    32461 aataccgacc atctcaccaa cacttgcttt gaatgaaata tcttccagag caggcgtatc
    32521 gtcaccgtcg tatttgaaac taacgttacg gaattcaact gtaccttcta aatcttgttc
    32581 tggcgcgctt tcattgtaag taatatctgg ttctgtttcc agaacttcgg taatacgctt
    32641 caaagaaata agcgcacgag aagccatcat catcagcata ccaccaataa taattgccat
    32701 cataatttgc attaagtagt tcatgaatga tgcgatagct ccgataactt caggattatc
    32761 tgcagccata tcgcctacaa agaaaataga aacaacaatt gctaagttag aaacgagcat
    32821 aaatgcagga atcattacag agaaaagcgt tccaacgatg attgtgtggc gagttaattt
    32881 gtcactgaca gttgtaaagc gactgatttc attatcttct tgcacgaaag atttaactac
    32941 gcgcatgcca gcaaggtttt cttttgcaat agaattcact cggtcaatta acttctgaat
    33001 aatggcaaaa tgtttaccca tagacccgaa tgtgaataca acaatcagaa caacaagaac
    33061 aacgagtaca ataattaccc accataattc aggtaaagta aacatcgcta aaataaaagc
    33121 cccgatgaac ataatcggaa ttctcgtaag cgattgtagt gaaagcatca ctaagttttg
    33181 aacttgggta atgtcgtttg tttgtcgaac aactagatta cctgtcgaaa gtttttcgat
    33241 gttgctgaat gaaaatgttt ggattttacg gaaactagat tcacgaatat ctgcaccgac
    33301 gccttgagcg actttggctg aaagtattgt gtttaggatc ccggcgataa ggccgactgc
    33361 ggcaataccg attaaaagtg cgccgatgga tgagatttca tccatatcat ctttcatgat
    33421 ggcgtctagg acttgctgaa gtaactttgg ttgccatagt tgtgagataa ccatgactac
    33481 tacaaacagt gtagatagtg tcgcttgtag cttgtatttt tttagatggt gaaacaatac
    33541 tttcatgatt ttcctccctt ggaaaacgga aataaaaacg tgcgaacaca tattctaata
    33601 tagattgtga aaatttgcaa gtaatttttt cacaaattat aaatgtggcg aaaatatg
//
LOCUS       DASDYO010000013        31647 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.013, whole genome shotgun sequence.
ACCESSION   DASDYO010000013 DASDYO010000000
VERSION     DASDYO010000013.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 31647)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31647)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31647
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.013"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            65..991
                     /locus_tag="U0290_000562"
     CDS             65..991
                     /locus_tag="U0290_000562"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464910.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM2300613.1"
                     /translation="MSYVQINESFMEELALKKVKQERRKRLKWFVYKFLMITFGAILM
                     GVGLELFLVNNRILDGGVVGISIIISQLTPLPLGVLTFVLNIPFFIIGYRKIGKVFAL
                     FTLYGIAVMSIVTLVLHDMDPVTDDLLLATVFGGMTLGLGVGLVIRNGGALDGTEIIS
                     IIINGRTPFSTGQIIMFINIVIFIVAGLVFNWDRAMYSLITYFLAYKVIDIVIQGVDE
                     SKSAFIISRYYEEIGAEIMEQLGKGVTYLDATGGYSGDVRKVVFVIVSRFEEVKVKAI
                     LDEIDPDAFLAVGGSMSEVRGGKLMNTKTPHL"
     gene            1142..3415
                     /locus_tag="U0290_000563"
     CDS             1142..3415
                     /locus_tag="U0290_000563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA translocase FtsK"
                     /protein_id="HEM2300614.1"
                     /translation="MATQKKKTSGRKKSSTRSKKKQSASFRLEITGVILIAIGVIGLL
                     QLGFVGRGFFALAEMFVGLLSYVLLAGSVILGGYMVIRRKMPHLFSKRLVGIYLIVLG
                     FLTYIHMYFIIHNLGANASVISSTWKLVLENLFRPNQVGFVGGGMIGAVITSVTYFLL
                     DRLGTNLIAVLLIIYGFSLVSGISIRQFFSKIAEFVRYLFAKGKVATEKGKEVKAKRD
                     KKKAEKIVEVEPDEVLDVVDPAQEEKAPPIISNFSSKVEQEKAPVEEKTTKQEQDLEM
                     FQQESFENEIYQLPPVDILAPAKVTDQSKEYDQIKVNAKKLEDTFESFGVKAKITQVH
                     LGPAVTKYEVQPSVGVKVSKIVSLSDDIALALAAKDIRIEAPIPGKSAIGIEVANQNV
                     AMVSLREVLENNPKNNPDEKLQIALGRDISGEAMMASLDKMPHLLVAGATGSGKSVCI
                     NGIITSILLRAKPHEVKMMMIDPKMVELNVYNGIPHLLAPVVTNPKKAAQALQKVVAE
                     MERRYDLFSHTGTRNMQGYNDYVKKHNELNEEKQPELPFIVVIVDELADLMMVASNDV
                     EDAITRLAQMARAAGIHLIIATQRPSVDVITGVIKANIPSRIAFAVSSSIDSRTILDM
                     GGAEKLLGRGDMLLLPVGSSKPTRIQGAFLSDAEVEDVVNYVISQQKAQYSEEMIPDD
                     IPEVEGEVTDELYHEAVELVVEMQTASVSMLQRKFRIGYNRAARLIDEMEQRGVVGPH
                     EGSKPRRVNVEINPEHE"
     gene            complement(3449..4288)
                     /locus_tag="U0290_000564"
     CDS             complement(3449..4288)
                     /locus_tag="U0290_000564"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEM2300615.1"
                     /translation="MAKIGFIGFGSMASLIATKIIETEVATPEELILYSNSKNEHFNQ
                     FYNKYPTAKLADNEAEIFTKADHSFVCKLPLAVLPLMKDCAAVLTPDRHVISIAAGVS
                     TSDIIEITPGLQVSKLIPSLTTAVNVGTTLIAHADTVNQANTSWLETTFEHFGHVMTI
                     REENMDIASDLTSSSPGIIAAIFEQFVEAALRRSSLSDAEVFQMINFALAGTSKLLVE
                     EDYTFSGLIERVATKGGITAEGIELSEEQLPQFFDELLDRTQTKYASSKKEIQAQKQD
                     LLL"
     gene            4641..5714
                     /locus_tag="U0290_000565"
     CDS             4641..5714
                     /locus_tag="U0290_000565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BMP family protein"
                     /protein_id="HEM2300616.1"
                     /translation="MKKRTFALALSMIIASGVILGACGSSSDDKKSSDDKSSKDFTVA
                     MVTDTGGVDDRSFNQSAWEGLQKFGKANDMEKGTDGYNYLQSASEADYKTNLNTAVRS
                     DYDLIYGIGYKLKDAIEEVSKQKPKNQFAIVDDTIDDRDNVVSIGFKDNDGSYLVGVV
                     AGLTTKTNKVGFVGGVKGTVIDRFEAGFTAGVKAVNPNAQIDVQYANDFAKADKGQQI
                     ASSMYSSGVDVIFHAAGGTGNGVFAEAKNLKKKDPSRAVWVIGVDRDQWDEGKVTAND
                     GKDYNVTLTSEIKRVDIAVEDLATRAKAGDFPGGTKIEYGLDKDAVGLSEHQDNISKD
                     VLAKVEEYKQKIVDGDIKVPEKP"
     gene            6146..7687
                     /locus_tag="U0290_000566"
     CDS             6146..7687
                     /locus_tag="U0290_000566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300617.1"
                     /translation="MDFVIEMLGIRKEFSGFVANDNITLQLKQGEIHALLGENGAGKS
                     TLMNVLFGLYEPDGGEIRVRGTKENINSPNKANELGIGMVHQHFMLVDKFTVAENIIL
                     GKEPSKLGVIEKKKAIEEIKEISDRYGLRVDPNAVVRDISIGMQQRVEILKTLYRGAD
                     ILIFDEPTAVLTPQEIKELIQIMRSLIKEGKSIILITHKLKEIMDVCDRVTVIRRGKG
                     MGTVNVPETTPQDLANLMVGREVVFTTEKIDAKPGKDVLEVKDLVVKESRGVESVRGL
                     NLTVRAGEIVGIAGVDGNGQSELISAIAGLSKVTSGSILLNGEHIENKKPRKITEAGL
                     GHIPEDRHKHGLVLEMSLGENIALQTYYKKPISSKGFLNHKAMYDFARELIEEYDVRA
                     SSEYVAAKSLSGGNQQKAIIAREIHRNPDFLIAAQPTRGLDVGAIEFIHRRLIEQRDN
                     GKAVLLMSFELDEIMNVSDRIAVIYEGKIVAIVDPKETTEQELGLMMAGSSKQEAEMG
                     EKEHV"
     gene            7680..8732
                     /locus_tag="U0290_000567"
     CDS             7680..8732
                     /locus_tag="U0290_000567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2300618.1"
                     /translation="MSKRLQALVIPVTAVILGLICGAIIMLIFGYDPIAGYSALIQGV
                     IGENFYIGETIRQATPYILVGLSVAVAFKAGLFNIGAEGQMLMGWLGSIIIAVNFDGL
                     TKWIHLPLAIITGMVFGALWAFIPGILKATLRVNEVIVTIMLNYTALYIFNYVVQNLL
                     TDGLDKTQEIHASASLQSELLQSLTDYSSLHWGILIALGFALIIWLMLNKTTFGYEIE
                     AVGFNENASQYAGMSVKKTIIFSMVIAGALAGLGGVMEGLGTYGTAYVLTSSPGIGFD
                     GIAVALLGGSSPIGIVFSAILFGALKVGALNMPAVAGVPNELVNVIIALIIFFVASSY
                     IIRWAMAKFKKGAKAE"
     gene            8729..9679
                     /locus_tag="U0290_000568"
     CDS             8729..9679
                     /locus_tag="U0290_000568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2300619.1"
                     /translation="MTAILATIISSTLLMAGPLIFTALGGVYSERGGVVNIGLEGMMV
                     MGAFSAIVFNLTFQDTFGNLTPWISLIAAMVVGGLFSLVHAVATINFRADHVISGVAI
                     NFLATGLSLFLVKVIYDKGQTDQIKYYFGKPDIPVLSDIPVIGDIFFKNIPVMSYVAI
                     LFAIASWFIIYKTRFGLRLRSVGEHPLAADTMGIKVRWMRYQGVIISGILGGLGGAVY
                     AQSFTLDFGHATISGQGYMALAAMIFGKWNPLGAMGAAIFFGFAQCLAITGGSLPFFK
                     DIPDVYLQIAPYVLTILALVGFIGKSEAPKADGVNYIKGK"
     gene            9796..11088
                     /locus_tag="U0290_000569"
     CDS             9796..11088
                     /locus_tag="U0290_000569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEM2300620.1"
                     /translation="MTDKIFQEKVGPVALTIVPTQKYKSNKIVFKFRAPLERETVTKR
                     ALLSILLETNSEKYPTQTAFRKQLANLYGANFYTTTAKKGNEHVLTVIFDMIDGQYVS
                     DGIHILEDAFAFIEQALFHPNVTNGAFNDETLAREKENLKSSLEGIYDDKIRFASKRL
                     VEEMFRDDEFRFGSAGVLEDIDAITAKDLYEYYLQFIAEDAIEIFICGDVTKEEVLPL
                     IEKMAFAPRAERKGVFYTKEAPNVVRTIHEQQAINQGKLVLGYQTETLFGDDDFVALQ
                     LANGLLGGFANSKIFINVREKASLAYYASSRIDSFKGYMIISAGIDEVNYEQALKIIE
                     EQVVAMKQGNFTEDELNQTKEMLINQLLETNDQAQGLIELVYNNVLRKANLDLENWIA
                     KIKQATKEEVVAVINKIKPDTIYFLSKGGEELHGKNHI"
     gene            11069..12355
                     /locus_tag="U0290_000570"
     CDS             11069..12355
                     /locus_tag="U0290_000570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="insulinase family protein"
                     /protein_id="HEM2300621.1"
                     /translation="MEKITFEQVKEAVFHEKMANGLQVYLLPKQGFSKTYAVFTTNYG
                     AIDNNFVPIGETEFTKVPDGIAHFLEHKMFEKEDGDVFFKFGEKGAFTNAFTSFTKTA
                     YLFSSTSRVEENLETLIDFVQEPYFTEETVEKEKGIIGQEIRMYDDDPDFRAYFGVIE
                     NMYHNHPVKIDIAGTVESIAEINKDLLYLCYNTFYHPSNMVLFVVGNLEPEQMMDLIR
                     ANQAKKEFAEAAPIKRHFPEEPKTVAVKERKIHFPVQIAKNLVGIKEDIGSLEGQAAL
                     KQEIIGDVALEMLFGTTSDTYLKLYNEGIIDDTFGYDYTLQDSFSFVLVGGDAKDPDK
                     QTEKIKEAMKEAAKNGLNESDLALVKRKRIGQFLRSLNSPEFIANQFSQYVMKSASLF
                     DILPLLEEVTLEEVNAFVKNLDQEERTTSFQLLPEQ"
     gene            12447..13178
                     /locus_tag="U0290_000571"
     CDS             12447..13178
                     /locus_tag="U0290_000571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2300622.1"
                     /translation="MDKEIKYAFVTGASGEIGQAICLSLAKAGWNLYLHYYQNKQAVE
                     KLLPQLLAEDVDVILIQADFDDLTSLTEMEKQVFQLDAFIHAAGHAHYGLFQDTTDIN
                     ITELWNVHMYMPMRLIRTFMPKLMKSSQGRIIFISSIWGEVGASMEVAYSTVKGAQIA
                     FCRALSQEVGLSGITVNAVTPGVVETKMMDQFSDEEKEILRQEIPLNRFAQPEEIAEI
                     VAFLTSKKASYITGEVLRLNGGWLM"
     gene            13229..14158
                     /locus_tag="U0290_000572"
     CDS             13229..14158
                     /locus_tag="U0290_000572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2300623.1"
                     /translation="MTELGDKLKQARREKGLSLDDLQQVTKIQKRYLVAIEEGNYAVM
                     PGKFYARAFIKQYAEAVGLDSATLFDEFESEVPETPQQEVVNNEPTRVQSKRNPMPAQ
                     SVGNQANTRNRFFDILPKILIALFIVFILFIVWFFLLNKQDNSTEKVKTDTNNPTVKV
                     EDSTKSKDTSKDTEKKDTTTNKDKSTETKDKKEDTTKEVEVTKGGTSGNATTYTVKNT
                     DKMTLSLSATGDSWIGVSDANGSTIQNETLSTQNPSAEIDLGDNKTVSIVIGNSPVTT
                     VKINGKQLELAPDLVKQVLTINLEASDTSSDAE"
     gene            14249..14827
                     /gene="pgsA"
                     /locus_tag="U0290_000573"
     CDS             14249..14827
                     /gene="pgsA"
                     /locus_tag="U0290_000573"
                     /EC_number="2.7.8.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-diacylglycerol--glycerol-3-phosphate
                     3-phosphatidyltransferase"
                     /protein_id="HEM2300624.1"
                     /translation="MNLPNKLTVIRIFMIPIFVILCVVPFDWGSVTWLDSTIPVTSLV
                     ATIIFIVAALTDWFDGHLARKYNLITNFGKFADPMADKLLVAAAFIILVEMHIAPSWV
                     VILIISRELAVTGLRLLLVEGGEVLAAGQLGKIKTFTQMIAIPLMLLNNFPFAWTGIR
                     VDLVFLYVCAFFAVWSGIDYFYKNRGVFKGSM"
     gene            14895..16139
                     /locus_tag="U0290_000574"
     CDS             14895..16139
                     /locus_tag="U0290_000574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464922.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence/damage-inducible protein A"
                     /protein_id="HEM2300625.1"
                     /translation="MASAEIIAVGTELLLGQIVNSNAAFISQELAADGIYVYHHTVVG
                     DNPTRLKEVIEIAENRSDILIFTGGLGPTEDDITKQILAAHLQKQLVEDEYHMNKINE
                     YFTSRNRTMTENNKLQAVIIEDSIVLNNDFGFAAGMYLRENNHTYVLLPGPPSEMKPM
                     FTSYANPLLLSESGDQNILESKIMRFFGIGESQLAADLNDLIVTQVNPTIATYAGDNE
                     VVVRITATAKTKEEASRLVKETEEEILRREGTFLYGYGEVSLSELVTAMLLEKELTIS
                     AAESFTAGLFQAEIARFPGISKIFKGGMVTYSEETKQSILQVSPQVIKEKGVVSAECA
                     KEMAENVSRLCKTDIGISFTGVAGPDSLEGHPAGTIWIGLSVKGYETEAFQFVYGRDR
                     NHNRRRAVKQGFQLIKQFLDAN"
     gene            16412..17458
                     /gene="recA"
                     /locus_tag="U0290_000575"
     CDS             16412..17458
                     /gene="recA"
                     /locus_tag="U0290_000575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecA"
                     /protein_id="HEM2300626.1"
                     /translation="MNDRQAALDQALKQIEKQFGKGSIMKLGEHSDQNISTISSGSLA
                     LDIALGVGGYPRGRIIEVYGPESSGKTTVALHAIAEVQAQGGTAAFIDAEHALDPAYA
                     KNLGVNIDELLLSQPDTGEQALEIAEALVRSGAVDMLVIDSVAALVPRAEIEGEMGDA
                     HVGLQARLMSQALRKLSGVINKSKTIAIFINQIREKVGVMFGNPEITPGGRALKFYST
                     VRLEVRRAEQLKQGTDVMGNKTKIKVVKNKVAPPFRIAEVDIMYGEGISREGELVDMA
                     AEVDVINKSGSWYSYKEERIGQGRENAKQYLKEHTDIRDEISKRVREEYEIDGSNKEP
                     LDEGEETLSLLDDE"
     gene            17759..19321
                     /gene="rny"
                     /locus_tag="U0290_000576"
     CDS             17759..19321
                     /gene="rny"
                     /locus_tag="U0290_000576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Y"
                     /protein_id="HEM2300627.1"
                     /translation="MTIAITIISSLLFLIVGLVVGSLIFKSSTEKKLAAARGTAELIV
                     EDAKKEAETTKKEALLEAKEENHRLRTEIENELRGRRTETQKAENRLLQREENLDRKD
                     TSLSKREATLERKEESISKRQQQIEEKESKLAEMIQAEQTELERISALSKEEAKSIIL
                     NQVEEELTHDTAIMVKESENRAKEESDKKAKNILSLAIQRCAADHVAETTVSVVTLPN
                     DEMKGRIIGREGRNIRTLETLTGIDLIIDDTPEAVILSGFDPIRREIARIALEKLVQD
                     GRIHPARIEEMVDKARKEVDEHIREVGEQATFEVGIHSIHPDLIKILGRLRYRTSYGQ
                     NVLNHSLEVSKLAGILAGELGEDVTLAKRAGLLHDIGKAIDHEIEGSHVEIGVELATK
                     YKENDVVINSIASHHGDTEATSVIAVLVAAADALSAARPGARSETLENYIRRLEKLEE
                     ISESYDGVEKSYAIQAGREVRIIVEPDTIDDLSSYRLARDIRKRIEEELDYPGHIKVT
                     VIRETRAVEYAK"
     gene            19436..19933
                     /locus_tag="U0290_000577"
     CDS             19436..19933
                     /locus_tag="U0290_000577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEM2300628.1"
                     /translation="MSEWEILPMIEEHYPGVAAVHQEGIETGNATFQEKTLSIEAFDE
                     KYLNTCRLVVLMNGKVIGWAALLPFSSMHAYRGVAELSIYIAKSARGKGIGKALMHEI
                     IQTSEQNGFWTLQSLIFPENKASIALHHTYGFQTLCVHEKLGEMNGVFRDVALLERRS
                     NRNGE"
     gene            19939..20742
                     /locus_tag="U0290_000578"
     CDS             19939..20742
                     /locus_tag="U0290_000578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR00282 family metallophosphoesterase"
                     /protein_id="HEM2300629.1"
                     /translation="MKILFIGDVVGSIGRDAITEYLPQLKKKYKPTITVINGENAASG
                     RGITEKIYKDFLELGANAVTLGNHTWDNRDIFEFIDDAKYLVRPANFPDDTTPGTGMV
                     FVKSNQHEIAVINMQGRTFLADLDDPFRKMDTLIEEAKKRTNIIFVDFHAETTSEKEA
                     MGWYLDGRVTAVVGTHTHVQTSDNRILPEGTAYLTDTGMTGPYDAILGMEKEAVIRRF
                     KTALPTRFEVPKTGRAVLSGCLITLDENTGKAQKIDRILINEDHPFSFD"
     gene            20759..21121
                     /locus_tag="U0290_000579"
     CDS             20759..21121
                     /locus_tag="U0290_000579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RicAFT regulatory complex protein RicA family
                     protein"
                     /protein_id="HEM2300630.1"
                     /translation="MTVSKDEIMKKATELRDALQQTEEVSFYRLAEERINANSKVAAK
                     VSKIKLLQKEAVNLEHYQKLEAMKQTENQIDNVRADIDSLPIVTEFRRAQEDANDLLQ
                     SITTEITTKVTTELEKEN"
     gene            21231..23813
                     /gene="mutS"
                     /locus_tag="U0290_000580"
     CDS             21231..23813
                     /gene="mutS"
                     /locus_tag="U0290_000580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair protein MutS"
                     /protein_id="HEM2300631.1"
                     /translation="MTEYTPMIKQYLEIKDKYQDAFLFFRLGDFYEMFFEDALNASQI
                     LEITLTGREGGTKEKIPMCGVPYHSASGYIDTLIEKGYKVAICEQVEDPKTTKGMVKR
                     EVVQLISPGTVMDERGLKAKENNYIASLYCYEGKEYGFAYSDLSTGELKSTVIEASED
                     RLINELTTLSTRELIVSSSEKEVLSDVMKEQLGLTFSVHEEDTIPVENEKLVTRHMSL
                     SEKRAIGKLLHYLKETQKRDLGHLQQAVHYETSNYMKMDYYSKRNLELAESIRGKGRQ
                     GTLLWLLDNTQTAMGGRMLKQWIDRPLIDRKKIIDRQNDVSELMAHFFERLELVENLK
                     NVYDLERLAGRVAYGNVNARDLIQLRNSLYQIPRIRATLLSMSSESLTELANQLDPCE
                     ELTEKLEEAIMDSAPISIREGGIIKDGYNSQLDTYRDASRNGKTWIAELERKERELTG
                     IKTMKVGFNRVFGYYIEVTRANTHLLPEGRYERKQTLTNAERYITPELKEKEKLILDA
                     EEKSMELEYQLFSEVREMVKDYIERLQKLAKSVSEIDCLQSFADISEKNHFIRPTLSE
                     DGSLHVKQGRHPVVEKVMGAQSYVANDCDLDENREILLITGPNMSGKSTYMRQVALTA
                     ICAQVGCFVPAEEAILPIFDQIFTRIGAADDLIAGQSTFMVEMLEARNAIVHATKDSL
                     ILFDEIGRGTATYDGMALAQAIIEYIHENVHAKTLFSTHYHELTDLEKELSGLQNIHV
                     SAVEENGKVVFLHKIKEGPADKSYGIHVAELAELPKSLIERASRILEQLENDDKKIII
                     ASVKQPEEVHEEVQLSMFPVEPEKKVSSKETKLLKEIASMNIMQMTPMDAMNKLYELQ
                     SKIH"
     gene            23833..25644
                     /gene="mutL"
                     /locus_tag="U0290_000581"
     CDS             23833..25644
                     /gene="mutL"
                     /locus_tag="U0290_000581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA mismatch repair endonuclease MutL"
                     /protein_id="HEM2300632.1"
                     /translation="MAKHIVELTDALSNKIAAGEVVERPASVVKELVENAIDAGSTVI
                     DILVEEAGLNKITIIDNGSGIEEEDVATAFLRHATSKIKNEADLFRVHTLGFRGEALP
                     SIASVSHLEMETSTGEAKGTTISLEGGKIIEQKSGHARKGTQIEVSQLFFNTPARLKY
                     LKSLPTELGNITDILNRLALAHPDISFRFSHNGKPLLQTNGNGDLRQVIAAIYGVSIA
                     KKSVPVKAESLDFKISGYAVLPEVNRSNRNYISTIINGRFIKNFALVKAIQEGYHTLL
                     PIGRFPIIVLQIEMDPIIVDVNVHPAKLEVRLSKEKELGQLISQMIKETFHKLQLIPD
                     GEISKKQKEDQKSEQIQMSFEENKPVKETPTLFSKPTIPEYVPSDEDAPREDDFILET
                     MPSYEPESQAEQEEHTKERIPKMYPIGQMHATYIFAQNENGLYIIDQHAAQERIKYEF
                     YREKIGEVSRELQELLVPIVLEFPADEYVRLEEQKAKLEEVGVFLENFGQNSFIIRAH
                     PTWFPKDQEEEMLREIIDEALSAPSISIHKLREDTAIMMSCKKSIKANHYLTTQDMEA
                     LLDTLREASDPFTCPHGRPVIIQYSTYELEKMFKRVM"
     gene            25661..26209
                     /locus_tag="U0290_000582"
     CDS             25661..26209
                     /locus_tag="U0290_000582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464930.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate responsive antiterminator"
                     /protein_id="HEM2300633.1"
                     /translation="MELPFSNQSIIPAAHNQKDMEKILELDLTYMVMLETHVAQLKAL
                     VKYAQAGGKKVLLHADLVNGLKNDDYAIDFLCTEICPDGIISTRGNAIMKAKQHKMLA
                     IQRLFMIDSSAYNKGVALIQKVQPDCIELLPGIIPEQVQKMTQKLHIPVIAGGLIETS
                     EQVNQVIASGAIAVTTSNKHLW"
     gene            26635..28866
                     /gene="pflB"
                     /locus_tag="U0290_000583"
     CDS             26635..28866
                     /gene="pflB"
                     /locus_tag="U0290_000583"
                     /EC_number="2.3.1.54"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate C-acetyltransferase"
                     /protein_id="HEM2300634.1"
                     /translation="MTEQWYEFAGGNWQQEVDVRDFILKNYRLYDGDDTFLVGPTEAT
                     TKLWDQVMDLTKKERENGGVLDMDTKIVSTITSHDPGYLNKDLEKVVGVQTDVPFKRA
                     LQPFGGIRMAEVAAESYGFKVDEEISHIFSEYRKTHNQGVFDAYTAEMRAARKSGVIT
                     GLPDAYGRGRIIGDYRRVALYGVDFLIKQKKQDLNNTGLRTMSDDVIRQREELNEQIR
                     ALGELKVLGEKHGFDLGRPAKTAQEAFQWLYLGYLAAIKEQNGAAMSLGRTSTFLDIY
                     VERDLRNGLITEEEAQEIVDHFIMKLRLVKFARTPDYNELFSGDPTWVTESIGGITEE
                     GVPLVTKNSFRFLHTLDNLGPAPEPNLTVLWSTHLPSGFKKFCAKMSIKTSAIQYEND
                     DVMRPKWGDDYAIACCVSAMRVGKQMQFFGARANLAKTLLYAINGGIDEKSKAQVGPA
                     YRPVEGDVLDYKEVMEKYDAMMEWIAELYLNTLNVIHYMHDKYAYERIEMALHDTEVL
                     RTMATGIAGLSVAADSLSAIKYATVRPIRDEDGIVVDYEIEGDYPKYGNNDDRVDEIA
                     VELLKTFMTKVRKHKTYRDAVHTTSVLTITSNVVYGKKTGNTPDGRRAGEPFAPGANP
                     MHGRDTKGALASLSSVAKLPYEYGQDGISNTFSIVPKALGREDESQINNLVAMLDGYS
                     TKMGHHLNINVFNRDTLLDAMDHPEEYPQLTIRVSGYAVNFIKLTREQQLDVIHRTMH
                     ESM"
     gene            28943..29689
                     /gene="pflA"
                     /locus_tag="U0290_000584"
     CDS             28943..29689
                     /gene="pflA"
                     /locus_tag="U0290_000584"
                     /EC_number="1.97.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate formate lyase-activating protein"
                     /protein_id="HEM2300635.1"
                     /translation="MTEVLGRVHSVETMGTVDGPGIRFIVFMQGCLLRCQFCHNPDTW
                     KIGTGTERSAQDVFDEAIKYKEFWDASGGGVTVSGGEPLLQVDFLIEFFTLCKAAGVH
                     TTIDSCGGCFTRDPEFIEKLDRLMEVTDLILLDIKQINPEKHLKLTTKSNAPIIDFAH
                     YLRDKEQPIWIRHVLIPTKTDDPEDLTKLHEFIQTLPNVKQVDVLPYHTMGVYKWKEM
                     GIRYPLEGIEAPEEEVVALANKILETSSYK"
     gene            complement(29723..30253)
                     /locus_tag="U0290_000585"
     CDS             complement(29723..30253)
                     /locus_tag="U0290_000585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2300636.1"
                     /translation="MIPNVLEYTLLQMIAREASSGYELANRLRIMQNTHHSQIYPSLS
                     KLEKAGFLVVHKHSQDKKPDKKVYTITQTGLDSLLEWSETPLKIPVTRDEFTTKVQLD
                     WLNNARTKGLIQERESYLKEQLGLIEETLDHFAKLFDLKTKQDKLKNMSYQVYARRLD
                     LIQTELKWCEEMYKIL"
     gene            30420..31613
                     /gene="mdrL"
                     /locus_tag="U0290_000586"
     CDS             30420..31613
                     /gene="mdrL"
                     /locus_tag="U0290_000586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter MdrL"
                     /protein_id="HEM2300637.1"
                     /translation="MMTDKEMNTGKWITAAASLLAFMGIGVVDPLLPSIAESIGASHS
                     QVEMLFTAYIFTMAIMMIPIGIVAGKLGDKKLIVIGLFIVTIFALLCGLSDTIGALSI
                     FRAGWGFGNSMFMATAMTMLIALSETPGHAIGIYEASMGLGMAFGPLLGGILGNISWR
                     YPFFATACLIFIAFLLILFKVKEPKKVAPAPTEKNEVAIKQMLHLFKYRPFLQIAFSG
                     MFYYYCFFTILAYSPLILGLSAIQIGFVFFAWGLCLALGSAKISHALEFRFNSKQILK
                     GSLLACAVILALLGFIDNIAVDIGLIVISGLILGINNALFTTTVMEHSPYARSVTSGA
                     YNFVRWLGAAFAPLCSGLLSEALGMKMPFIVASVICLAGMGLLFIKLKPSHFTLQQST
                     SIESE"
BASE COUNT        10585 a         5326 c         6571 g         9165 t
ORIGIN      
        1 ttttgttgat gaaagcaaat cctgttttca ttgcctaaaa taaagaatga agtaaggatt
       61 gggcgtgagc tatgtgcaaa taaatgaatc gtttatggaa gaactagctt taaaaaaagt
      121 aaaacaagaa cgcaggaaaa ggttgaagtg gtttgtttat aagtttttaa tgattacctt
      181 tggcgcaatt ttgatggggg ttgggctgga acttttcctt gtaaacaacc gaattttaga
      241 tggtggagtc gttggtattt cgattattat ttcgcaacta acgccgctgc cactaggggt
      301 tttaactttt gtacttaata ttccgttttt catcataggt taccgaaaaa tcggaaaagt
      361 atttgcgctg tttacattgt acggaattgc agtcatgtcg attgtaacgc tcgttttaca
      421 cgatatggat ccagtgacag atgatttact acttgcgact gtttttggcg gaatgacgct
      481 tggtcttggg gtgggtcttg ttattcgtaa cggaggggcg cttgatggaa cagaaatcat
      541 ttcaatcatt attaacggtc ggacgccatt ttcaacagga caaattatta tgtttattaa
      601 tattgttatt tttatcgttg ctggacttgt gttcaactgg gatcgagcga tgtattcctt
      661 aattacgtat ttcctagcgt ataaagtaat tgatattgtt attcaaggtg tagatgaatc
      721 gaaaagtgct tttattatca gccgctatta cgaggaaatt ggagcagaaa ttatggagca
      781 acttggaaaa ggtgttacat acttagatgc aactggcggg tattccggtg atgtaagaaa
      841 agtagttttc gttatcgtct caagatttga agaagtaaaa gtgaaagcca ttctggatga
      901 aatagatcca gatgccttct tagctgtcgg aggaagtatg tcggaagtcc gcggcggaaa
      961 gctgatgaac acgaaaacac cgcacctata acaaaacaga aaccatatat ctcctacttg
     1021 ggatatatgg ttttttgacg aaaggaaaca tttgtttgta taatagggct atagtatgag
     1081 cgacagaacg gatagatgtg ctataataaa acaagcaaaa aaggaatggg tgggacttga
     1141 aatggcgaca caaaagaaaa aaacgagcgg acgtaaaaaa tcgtcaacac gctcaaaaaa
     1201 gaaacaatca gcctcttttc gtttagaaat aacaggggtt attttaatag caataggagt
     1261 tatcggactt ttacaattag gctttgtcgg tcgcggtttt tttgctctgg ctgaaatgtt
     1321 tgttggtctt ttaagctatg tattacttgc gggtagcgtg atacttggtg ggtacatggt
     1381 gattagaaga aaaatgcctc acttatttag caaaagacta gtcggtattt atcttattgt
     1441 tttaggcttt ttgacatata tacatatgta tttcattatc cacaacttag gagcaaatgc
     1501 ctccgttatt tctagtactt ggaaattagt attagaaaat ttatttagac caaatcaagt
     1561 tggttttgtt ggtgggggaa tgattggggc agtaattacc tccgttacgt atttcttatt
     1621 agatagatta ggaacgaatt tgatagctgt tctacttatt atctatggtt tttcccttgt
     1681 atcgggtatt tccatccggc aatttttctc caaaattgcc gaatttgttc gttacttatt
     1741 tgcaaaaggc aaagttgcga ccgaaaaagg caaagaagtg aaagcgaaac gtgataaaaa
     1801 gaaagcagag aaaatagttg aggttgagcc tgatgaagta ctagatgtag tagaccccgc
     1861 gcaagaagaa aaagcgccgc caatcatctc taactttagc tccaaagtag aacaagaaaa
     1921 agcaccagtc gaagaaaaaa caaccaaaca agagcaagat ttagaaatgt ttcagcaaga
     1981 atcgttcgaa aatgagattt atcaattgcc ccccgttgat attttagcac cggctaaagt
     2041 aacggatcaa agtaaagaat atgaccaaat taaagtaaac gcaaaaaaat tagaagatac
     2101 ctttgaaagc ttcggagtga aagcaaaaat cacccaagtt catcttggcc ctgcagtgac
     2161 aaaatatgaa gtacaaccat ctgtcggtgt taaagtgagc aagattgttt cactcagtga
     2221 tgatatagca cttgctctag cagcaaaaga tattcgaatt gaagcgccaa ttccggggaa
     2281 atctgctatt ggaatcgaag tagcgaacca aaatgtagcc atggtttctt tacgtgaagt
     2341 gttagaaaac aaccctaaaa acaatccaga cgagaagctt caaatagcac ttggtcgtga
     2401 tatttctgga gaagcaatga tggcaagtct cgataagatg cctcatttac tcgtcgcagg
     2461 agcaactggt agcgggaaat ctgtgtgtat taatggtatt attacaagca ttttactccg
     2521 tgccaaacca catgaagtca aaatgatgat gattgatcca aaaatggttg agctaaatgt
     2581 ctataatggc attccacact tgctcgcacc agttgttacc aatcctaaaa aagcagccca
     2641 agcattgcaa aaagtcgttg cggaaatgga acggcgctat gatttatttt cgcatacagg
     2701 tactcgtaat atgcaaggct acaatgatta tgtaaaaaaa cataatgagc tgaacgaaga
     2761 aaaacaacct gaattgcctt ttattgttgt aattgtagat gagttagctg acttgatgat
     2821 ggtagcttcc aatgacgtag aagatgcgat tactcgcctt gctcaaatgg cacgtgctgc
     2881 gggaatacat ttaattatcg caacacagcg tccatcagta gatgttataa ccggcgtaat
     2941 taaagcgaat atcccgtctc gaattgcttt tgccgtttca agttccattg attcaagaac
     3001 gattcttgat atgggcggag cagagaagtt acttggacga ggcgatatgc tgttacttcc
     3061 agttggctct agtaaaccta cccgaattca aggcgctttt ttatcggatg cagaagtaga
     3121 agatgtagtt aattacgtta tttcgcaaca aaaagcacaa tatagcgaag aaatgattcc
     3181 tgatgatatt ccagaagtcg aaggagaagt aacggatgaa ttgtatcacg aagcagtgga
     3241 gcttgttgta gaaatgcaga cagcttccgt ttcgatgtta caaagaaaat tccgtattgg
     3301 ctataatcgt gcagctaggt tgattgatga aatggaacaa agaggtgtag ttggacctca
     3361 cgaaggaagt aaaccaagaa gagtaaatgt ggaaattaat ccagagcatg aataaaaaaa
     3421 ggttgcgatt tgtagtcgca accctttttt ataaaagtaa atcttgcttt tgtgcttgaa
     3481 tttctttttt actagaagca tattttgttt gagttcggtc aaggagttcg tcaaaaaatt
     3541 ggggtaactg ctcctcactg agttcaatgc cttcagcagt gatcccgccc tttgtagcaa
     3601 cgcgttcaat taagccacta aacgtgtaat cttcttctac taataattta gaagtcccag
     3661 ctaaagcaaa attaatcatt tgaaatactt ccgcatctga taatgaagat cttctaagag
     3721 cagcttctac aaattgctcg aaaatagcag caattattcc aggagaagag ctagttaaat
     3781 cgctagcgat atccatattt tcctctcgga tagtcattac atgtccaaaa tgctcaaatg
     3841 tcgtttctaa ccaagaagtg ttagcttgat tcactgtgtc agcgtgcgca atcaaagtag
     3901 ttccaacatt aacagcagtt gtgagagaag ggattaattt acttacctgt aaacccggag
     3961 tgatttcaat aatatctgaa gtactcacac cagctgcaat agaaatcaca tgacgatcag
     4021 gtgtcaatac cgcagcacaa tctttcataa gtggtaaaac tgcgagaggt aacttacaaa
     4081 cgaagctatg atctgctttt gtgaaaattt cggcttcgtt atcagctagc ttagcagttg
     4141 gatatttatt ataaaattgg ttgaaatgtt cgttttttga attggaataa aggatgagtt
     4201 cttcgggagt tgcaacctca gtttctatta ttttagtcgc aattaacgat gccatacttc
     4261 caaaaccaat aaaacctatt tttgccattt ccatcccgcc tttcattatt cattttatta
     4321 tgaagggaat aaaagaggat tgcaactaaa cttgattgtt tactttttca cgttaatgcg
     4381 cttgtgccta aggattgaca aaaaaacgaa tgattccgac agaattaaat tttctgaatt
     4441 catttgcatt aaaaatttat gaagttggtt atttatttat tttattttcc atgttatatt
     4501 aagaacagtt agagaagacg ttaaatgttt ttgtgcgttt tccgaaaaag ggaccataca
     4561 taatttttta atacgcgcct gaatgtttgt tttgacagaa agctctgact aacattatat
     4621 ctctcgggag gggttttaag gtgaaaaagc gtacatttgc tttagcacta tcaatgatta
     4681 ttgcttctgg cgttatccta ggtgcttgtg gttcgagtag cgacgataaa aaaagtagcg
     4741 atgataagag cagtaaagat tttacagtag caatggttac agatactggt ggcgttgatg
     4801 accgttcgtt taaccaatca gcatgggaag gcttacaaaa atttggtaaa gctaacgaca
     4861 tggaaaaagg tacagatggt tacaactact tgcaatcagc ttctgaagca gactacaaaa
     4921 caaacttaaa cactgctgtt cgtagcgatt atgatttaat ttatggaatt ggttacaaac
     4981 tgaaagatgc aattgaagaa gtttctaaac aaaaacctaa aaatcaattc gctattgttg
     5041 atgacacaat tgatgaccgt gataatgtag taagtattgg atttaaagat aacgatggtt
     5101 cttatctagt tggtgtagta gctggcttaa caacaaaaac aaataaagtt ggatttgttg
     5161 gtggagtaaa aggaactgtt atcgaccgtt ttgaagctgg tttcactgct ggtgtaaaag
     5221 ctgttaatcc taacgcacaa attgatgtac aatatgcaaa cgatttcgct aaagcagaca
     5281 aaggacaaca aatcgcttct tccatgtatt caagtggagt tgacgtaatt ttccatgctg
     5341 ctggtggtac tggtaacggt gtctttgcag aagctaaaaa cctgaagaaa aaagatccta
     5401 gccgtgctgt ttgggtaatc ggtgttgacc gtgaccaatg ggacgaagga aaagttacag
     5461 caaacgatgg caaagattac aatgtaactc ttacatctga aatcaaacgt gttgatatcg
     5521 ctgtagaaga ccttgcaact cgtgctaaag ctggagattt cccaggcgga actaaaattg
     5581 aatacggtct tgataaagat gctgtagggc tttctgaaca tcaagataat atttctaaag
     5641 acgttcttgc taaagtagaa gagtacaaac aaaaaatcgt tgatggggac attaaagttc
     5701 cagaaaaacc ttgattttat agttataaaa aatgagtaat atgaacgaag taaaaccttt
     5761 tatgaaagtc ggtatcaaac gtaccggctt tcataaaaaa ataatttgta agcgttttaa
     5821 tttgataggt aaaccctttt actaaaagaa aataatcggt atattggaat ttatgattgc
     5881 aatgaatgcc atttagaaat aaaataagga gatggctttt ttaatagctt aaaaatgcaa
     5941 agtaaacttt cgtacataga tggtattata aatcgcattt tacaacatac caaagtattt
     6001 aagctgaaaa gtcattgaac aacaaacgga taaaaaactc ggaaccttct tcgggaggaa
     6061 gtacggggag aggcggcgtc cttcgagaga atcgcgcgtg tggctgtttt tccagtttga
     6121 accagacgac aaggggagtg aagaagtgga ctttgttatt gaaatgttag gaatcaggaa
     6181 ggaattctct ggatttgtag caaatgataa cattacctta cagttaaagc agggagaaat
     6241 tcatgctttg ttaggtgaga atggcgcagg taaatctacg ctaatgaatg tcttgtttgg
     6301 tttatatgaa ccagatggtg gcgaaattcg tgttcgtggt acgaaagaaa atatcaatag
     6361 cccgaacaaa gcaaatgagc ttggaatcgg aatggtccat caacatttca tgttagtgga
     6421 taaattcacg gttgcagaaa acatcatcct tggtaaagag ccaagcaaac tcggtgttat
     6481 cgaaaagaaa aaagcgattg aagaaattaa agaaatttct gatcgttacg gcttacgcgt
     6541 tgatccaaat gcagttgtac gagatatttc aatcggtatg caacagcgtg tggaaattct
     6601 aaaaacgctt taccgtggtg cagatatctt gatttttgat gaaccaacag ctgttttgac
     6661 accccaagaa atcaaagaat taatccaaat tatgcgttcc cttattaaag aaggcaaatc
     6721 catcatttta atcacacata aactaaaaga aatcatggat gtttgtgacc gtgtaactgt
     6781 tattcgccgt ggtaaaggta tgggtactgt taatgttccg gaaacaacac cacaagattt
     6841 ggctaattta atggttggtc gtgaagtggt ctttacaaca gagaaaatag atgccaaacc
     6901 tggcaaagat gttttagaag taaaagattt agttgtgaaa gaaagccgcg gagttgaaag
     6961 tgttcgtgga cttaatttga ctgtcagagc tggcgaaatc gtcggaatag ctggagtcga
     7021 tggtaatggt cagagtgaac ttatttcagc gattgcaggt ctttctaaag taactagtgg
     7081 tagtattctt cttaatggcg agcatatcga aaacaaaaaa cctcgtaaaa ttacggaagc
     7141 tggtttagga catattccag aagaccgtca taaacatggt ttagtactcg aaatgtctct
     7201 aggagaaaat attgctttac aaacatatta taaaaaacct atttctagca aaggcttctt
     7261 aaatcataaa gcaatgtacg actttgcgcg tgagttaatt gaagaatacg atgttcgtgc
     7321 aagtagcgaa tacgtagcag caaaatcgct ttctggtggt aaccaacaaa aagcaattat
     7381 tgcaagggag atacaccgta atccagattt cttaattgcg gctcagccaa cacgtggact
     7441 agatgttgga gcaattgaat tcattcatag acgcttgatt gaacaacgag ataatggaaa
     7501 agctgtttta cttatgtcgt tcgaattaga tgaaatcatg aatgtaagtg accgtattgc
     7561 ggttatatac gaagggaaaa tcgttgctat tgttgatccg aaagaaacaa cggagcaaga
     7621 acttggtctg atgatggctg gttcatccaa acaggaagcg gaaatggggg agaaagagca
     7681 tgtctaaacg actacaagca ttagttatcc cagttacagc cgttatcctt ggacttatct
     7741 gcggtgcgat tatcatgctt atttttggat atgacccaat tgctggttat tcggctctga
     7801 ttcaaggtgt tatcggagaa aatttctata ttggtgaaac aatccgccaa gctacaccgt
     7861 acattttagt tggtctatct gttgcagttg catttaaagc cggacttttc aatattggtg
     7921 cggaaggtca aatgctgatg ggatggttag gttccattat catcgctgta aactttgacg
     7981 gtttaactaa atggattcat ttaccacttg cgattattac tggtatggtt tttggtgcac
     8041 tttgggcatt catcccaggt atattaaaag caactttacg tgtgaatgaa gttatcgtaa
     8101 caatcatgct taattacacg gcactttata ttttcaacta tgtcgtacaa aatttactta
     8161 cagatggttt ggacaaaacg caagaaattc atgcgtccgc ttccttacaa tctgaattat
     8221 tacaatcact tacagattat tcgtctctac attgggggat tttaatagcc ctaggttttg
     8281 cacttattat ttggttaatg ttaaacaaaa ctacttttgg ttacgaaatc gaagcagttg
     8341 gatttaacga aaatgcatcg caatatgccg gtatgagtgt aaagaaaaca attatctttt
     8401 ccatggttat tgccggagcg cttgctggtc ttggtggtgt aatggaaggt cttggaacat
     8461 acggaacggc ttatgtatta acttcttctc cagggattgg ttttgacggt attgccgttg
     8521 cattactcgg aggaagttct ccaattggga ttgtcttctc tgccatcttg ttcggcgctc
     8581 taaaagtagg agcactaaac atgccagcag ttgcaggcgt tccaaacgaa ttggtcaatg
     8641 taattatcgc tctgattatc ttctttgtgg catccagcta cattatccgc tgggcgatgg
     8701 caaaatttaa gaagggggcg aaagcagaat gacagccatt ttagcgacaa ttatttctag
     8761 tacactgctt atggcaggcc cactaatttt tactgctctc gggggcgttt attcagaacg
     8821 aggcggtgtg gttaatattg gactagaagg tatgatggtt atgggagcat tctctgctat
     8881 cgtctttaac cttactttcc aagacacttt cggcaattta actccttgga tttcacttat
     8941 tgcggcgatg gtcgttgggg gattattctc tcttgtacat gctgttgcaa ctattaactt
     9001 ccgcgctgac cacgtaatca gtggtgtagc gattaacttt ttagcaaccg gtctatcttt
     9061 attccttgta aaagtaattt atgataaagg ccaaacagat caaattaagt actactttgg
     9121 taaaccggat attcctgttt taagtgatat tccagttatt ggtgatattt tcttcaaaaa
     9181 cattccggta atgagttatg tggcgattct atttgcaatc gcatcttggt ttattattta
     9241 taaaacgcgt tttggtcttc gtcttcgttc tgtaggggaa catcctcttg cagcagatac
     9301 gatgggaatc aaagttcgct ggatgagata ccaaggggtt atcatttctg gtatccttgg
     9361 cggtctaggt ggcgcggttt acgcccaatc ctttacactt gatttcggac acgcaactat
     9421 ttccggtcaa ggttatatgg cccttgcagc gatgattttt ggtaaatgga acccacttgg
     9481 agcaatgggg gcagctattt tcttcggatt tgcgcaatgt ttggcaatta ccggcggatc
     9541 gctaccattc ttcaaagaca ttccagacgt ttacttacaa attgcgcctt atgtattaac
     9601 tatcttagcg cttgttggct ttatcggtaa atccgaagca ccaaaagcag atggtgtgaa
     9661 ctacattaaa ggtaaataat acgagtaaac agcctagatt aaattctagg ctgtttttta
     9721 tgctagaaaa ttgtgcgtgg caacaactta agatacaata ggaaagtgag atcattgctt
     9781 gaaaggagca ttataatgac agacaaaata tttcaagaaa aagttggtcc ggttgcacta
     9841 acaattgttc caacccaaaa atataaatcc aataaaattg ttttcaaatt tcgcgctcca
     9901 ttagaaagag aaacagtaac taaacgggct ttactttcaa tattattaga aacaaatagt
     9961 gaaaaatacc caactcaaac agctttcaga aagcaattag cgaatcttta cggtgctaat
    10021 ttttatacaa caacagctaa aaaaggtaat gaacacgtat taactgttat tttcgatatg
    10081 attgatgggc aatatgtatc ggacggaatt catattttgg aagatgcttt tgcttttata
    10141 gaacaagcat tattccatcc aaatgtgaca aacggcgctt tcaatgatga aacacttgct
    10201 cgcgaaaaag agaacttgaa aagtagttta gaaggtattt acgatgacaa aattcgtttt
    10261 gcttctaaac gactagtaga agaaatgttc cgcgatgatg agtttcgttt tggctcagct
    10321 ggcgttttag aagacattga tgctatcaca gcgaaagatt tatatgaata ctacttacaa
    10381 tttattgcag aagatgctat cgaaatattt atttgtggag atgtaacaaa agaagaagta
    10441 ttgcctctta tcgaaaaaat ggcttttgcg ccacgtgctg aacgaaaagg tgttttttat
    10501 acaaaagaag ctccaaatgt agtgcgcact attcatgagc aacaagcgat taatcaaggg
    10561 aaacttgtac ttggttatca aacagaaacc ttatttggag atgatgattt cgttgcactt
    10621 caacttgcaa atgggcttct tggcggattt gctaattcga aaatctttat caacgttcgc
    10681 gaaaaagcga gtctggctta ttatgcttca agccgaattg attctttcaa aggttatatg
    10741 attatttcag ctggaattga tgaagtaaat tacgaacaag ccttaaaaat tattgaagaa
    10801 caagtagtag caatgaaaca aggcaatttt acagaagatg aattaaacca aacaaaagaa
    10861 atgcttatta atcaattgct tgaaacaaat gatcaagcgc aagggttaat cgaacttgta
    10921 tataacaatg ttctgcgtaa agcaaactta gacttagaaa attggattgc gaaaatcaaa
    10981 caagcaacca aagaagaagt agttgctgtt atcaataaaa ttaaaccaga taccatttat
    11041 ttcttaagta agggaggaga agaacttcat ggaaaaaatc acatttgagc aagtaaaaga
    11101 agcagtcttt catgaaaaaa tggcaaatgg cttacaagtg tatcttcttc caaaacaagg
    11161 ttttagtaag acttatgctg tattcacaac aaattacggt gcaattgata ataacttcgt
    11221 cccaattggt gaaacagaat tcacgaaagt accagatggt attgcccatt tcttagaaca
    11281 taaaatgttt gaaaaagaag acggcgatgt attcttcaaa tttggcgaaa aaggcgcgtt
    11341 tacgaatgca tttacctctt tcacaaaaac agcttatctt ttctcgagta cttctcgagt
    11401 ggaagaaaac ttggaaacgc tgattgactt tgtacaagag ccgtatttca cagaagaaac
    11461 tgttgaaaaa gagaaaggta ttatcggcca agaaatcaga atgtatgatg atgatcctga
    11521 ttttcgcgct tattttggcg taatcgaaaa tatgtatcat aatcatccag taaaaatcga
    11581 tattgctgga accgttgaat cgattgccga aattaacaaa gatttactgt atctttgcta
    11641 taacacattc tatcacccta gcaacatggt cctttttgtt gtagggaatt tagaaccaga
    11701 acaaatgatg gacctgattc gcgccaatca agcgaaaaaa gaattcgctg aagctgcacc
    11761 gatcaaacgt catttccctg aagaaccaaa aacagttgca gtgaaagagc gtaaaattca
    11821 tttccctgtt caaattgcta agaaccttgt agggattaaa gaagatattg gctctttaga
    11881 aggccaagct gctttaaaac aagaaattat tggagatgta gccttggaaa tgctctttgg
    11941 cacaacctct gacacttact tgaagttata caacgaagga atcattgacg acacatttgg
    12001 ctatgattac accttacaag atagcttctc gttcgtatta gttggtggag atgccaaaga
    12061 tccagataaa caaaccgaaa aaatcaaaga agcaatgaaa gaagctgcca aaaacggctt
    12121 aaatgaatct gatttagcat tagtaaaacg caaacgaatt ggtcaatttt tgcgttcgct
    12181 gaattctccg gagtttattg cgaaccaatt tagccaatac gttatgaaat cagcttcttt
    12241 attcgatatt ttacctttat tggaggaagt taccctagaa gaagtaaatg catttgttaa
    12301 aaatttggat caagaagagc gaacaacaag tttccaatta cttccagaac aataaacaaa
    12361 ttatgtcttt ttttagtaga aaaaatagca taaattgctg agtcatgcta tcataaaaga
    12421 aatagactgg aaagggttgc ctttttttgg ataaagagat aaaatatgct tttgtaacag
    12481 gggctagcgg ggaaataggt caagcaattt gtttgtcact tgcgaaagct ggttggaact
    12541 tgtatcttca ctattatcaa aataaacaag cagtggaaaa attactgcca caattactag
    12601 cagaagatgt agatgttata ctgattcaag ctgattttga tgatttaaca agtttaacag
    12661 agatggagaa gcaagttttt cagttagatg cctttattca tgcagcaggg cacgcccatt
    12721 atggtttatt ccaggatact acagatataa atattactga attatggaat gtgcatatgt
    12781 atatgccaat gcgattaatt cgcactttta tgcccaaatt aatgaaaagt agccaaggaa
    12841 gaattatttt cattagttct atatggggag aagttggtgc atcaatggaa gtagcgtatt
    12901 caactgtaaa aggtgcgcaa atagcctttt gccgtgcgct aagtcaagag gtgggacttt
    12961 ctggaataac agttaatgca gttacaccag gggttgtaga aacaaaaatg atggatcagt
    13021 tttcggacga ggagaaagaa attcttcgtc aagaaatccc tttaaatcgt tttgcccaac
    13081 cagaagaaat tgcagaaatt gtagcatttt tgacaagtaa aaaagcaagc tatatcactg
    13141 gagaagtttt gcgcttaaat ggcggttggc ttatgtaatt ttagtaaaaa aatggaaatt
    13201 tgaaattagt aatggtaggt gtttaatttt gacagaactc ggtgataaac tgaaacaagc
    13261 tagacgtgaa aaaggactca gtttagacga cttgcaacaa gtaacgaaaa ttcaaaaacg
    13321 ttatttggta gcgattgaag aaggaaatta tgctgtaatg cctggcaaat tttatgcaag
    13381 ggcatttatt aaacaatacg cagaagcagt tgggctagat agcgcaacac ttttcgacga
    13441 gtttgaaagc gaagttccgg aaacaccgca acaagaagta gtaaataatg agccaacacg
    13501 ggtacaaagt aaaagaaatc cgatgcctgc acaatctgta ggtaatcaag cgaatactcg
    13561 taatcgtttt tttgatatct taccaaaaat ccttattgct ttatttattg tgtttattct
    13621 tttcattgtt tggtttttct tgcttaataa acaagacaat tccacggaaa aagtgaaaac
    13681 agatacaaat aatcctacag taaaagtaga agattcgaca aaaagcaagg atacaagtaa
    13741 agacactgag aaaaaagata cgacaacaaa caaagataaa tctacagaaa caaaggataa
    13801 aaaagaagat acaaccaaag aagttgaagt gactaaagga gggacgtctg gtaatgccac
    13861 tacgtacaca gtgaaaaata cggacaaaat gactctgtca cttagcgcca ctggtgattc
    13921 ttggataggc gtttccgatg cgaatggtag tacaatccaa aacgaaacac tatcaaccca
    13981 aaatccttct gcagaaattg atttaggtga taacaagacg gtttctatcg ttatcggaaa
    14041 ttctcctgtt acaactgtaa aaatcaatgg taaacagcta gaacttgcac ctgatcttgt
    14101 taaacaagta ttaacaatta atttagaagc aagtgatact agctcagatg ctgaataatt
    14161 tgttttatat ggcgaaatct actcattaga tttcgccaac attttttata attacatact
    14221 tttcaaatgt aaaaaaggag agaaaaagat gaatttacct aataaattga cggttatccg
    14281 aatttttatg ataccaattt ttgtcattct ttgtgtagtg ccattcgact ggggaagcgt
    14341 tacttggctt gattccacta ttccggtaac tagtttagta gcaactatta ttttcattgt
    14401 agcggctctt acagactggt ttgatggaca tttagctcgc aagtataatt tgattactaa
    14461 cttcggtaaa tttgctgatc cgatggctga taaactactt gtagcagctg catttattat
    14521 tcttgtagaa atgcatatcg ctccatcttg ggtagttatt cttattatta gtcgtgaact
    14581 agctgttact ggtcttcgct tacttttagt tgaaggcgga gaagtacttg cagctggtca
    14641 acttggtaaa attaaaacat tcacacaaat gattgctatt ccgcttatgt tattaaataa
    14701 ttttccattt gcttggacag gtattcgtgt ggatttagtg ttcttgtatg tatgtgcatt
    14761 ctttgcagta tggtcaggta tcgattattt ctacaaaaat cgtggtgttt tcaaagggtc
    14821 tatgtaataa atgaaaaaag cataccattg tgtgcttttt tctatacaaa aaatcgaatt
    14881 ggagatgggg caagatggca agtgcagaaa tcattgcagt aggaacagaa ctattactag
    14941 ggcaaattgt taattctaat gctgcgttta tttcacaaga attagctgct gacggaatat
    15001 atgtatatca tcatacggta gttggagata acccaacacg tttaaaagaa gtaatcgaaa
    15061 tcgctgaaaa ccgaagtgac attttaatct ttaccggcgg acttggaccg actgaggatg
    15121 atattacaaa acaaatcttg gctgctcatc tacaaaagca attagtggaa gatgaatacc
    15181 atatgaataa aattaatgag tatttcactt ctaggaatag gactatgacc gaaaataata
    15241 aattacaagc ggttattatt gaagattcca tcgtattaaa taatgatttt ggctttgcgg
    15301 ctggaatgta cttaagagaa aacaatcata cttacgtttt gctaccaggt ccaccatctg
    15361 aaatgaaacc aatgtttaca agctatgcta acccattact tttaagcgaa agtggcgatc
    15421 aaaacatttt agaatccaaa attatgcgct tttttggaat tggagagtca caattagctg
    15481 ctgatttaaa tgatttgatt gtcacgcaag tcaacccgac gattgcgaca tatgctggtg
    15541 ataatgaagt tgtggtccgt atcacagcga cagctaaaac aaaagaagaa gcaagcagac
    15601 ttgtgaagga aaccgaggaa gaaatattgc gccgagaagg taccttttta tatggatatg
    15661 gagaggtgtc attgtctgaa ttagttacgg cgatgttact tgaaaaagaa cttaccatct
    15721 ctgccgcaga aagtttcact gctggtttgt tccaagcaga aattgcccgc tttcctggca
    15781 tttcgaaaat tttcaaaggt ggtatggtga catacagtga agaaacaaaa caatctatat
    15841 tacaagtatc tccccaagta ataaaagaaa aaggcgttgt tagtgcggaa tgtgcgaagg
    15901 aaatggctga aaatgtaagc cgcctttgta agacggatat tggaatcagt tttacaggtg
    15961 ttgcaggtcc agatagttta gaaggtcatc ctgctggcac tatttggatt ggactaagcg
    16021 ttaaaggtta tgaaacagag gcttttcagt ttgtctatgg aagagatcga aaccataatc
    16081 gccgccgtgc agtaaaacaa ggatttcagt taattaaaca atttttagac gcaaattagt
    16141 ctttttttct agaagaaaag gaaaaaaatc tgcagaaaaa acggaaatga gcaataaaaa
    16201 agtgttagac gaaagctgaa aatcccgtta taatgaggaa gaaagcaacc ggtgcttaca
    16261 caaaataaaa aatacgaata aatgttcgct ttttgcttgc ttctcgctct aaaatgcgtt
    16321 atagtaattt taggaaaaca ttctgactgt tttttgagag agaagaagta gaaaaacagc
    16381 tattaggata tttattgaag gaggcaacaa tgtgaatgat cgtcaagcgg cattagacca
    16441 agctttaaaa caaattgaaa aacaattcgg taaaggttcc attatgaaat taggggaaca
    16501 ttcagaccaa aatatatcta ctatttctag tggctcatta gcattagata ttgctttagg
    16561 agtcggcgga tatccacgtg gacgtattat tgaagtatac gggccagaga gttccggtaa
    16621 aacaactgtt gcacttcatg ctattgcgga agtacaagca caaggcggaa cagctgcatt
    16681 tatcgatgca gaacacgcac tagatccagc ttatgctaaa aacctaggtg taaatattga
    16741 tgaattatta ctatctcaac ctgatacagg agagcaagca ttagaaattg cagaagcatt
    16801 agttagaagt ggtgctgtag atatgctagt aattgactcc gttgcagcac ttgtaccacg
    16861 tgctgaaatc gaaggggaga tgggtgatgc acacgttggg ctacaagcac gtttaatgtc
    16921 ccaagcattg cgtaaacttt ccggtgttat taataaatca aaaaccattg ctattttcat
    16981 taaccaaatt cgtgaaaaag ttggtgttat gtttggtaac ccagagatta cacctggtgg
    17041 tcgtgcgctt aaattctatt cgactgtacg tttagaagta agacgtgcag aacaacttaa
    17101 gcaaggtaca gatgtaatgg gtaacaaaac aaaaattaaa gttgtaaaaa acaaagtagc
    17161 tcctccattc cgtattgctg aagtggatat catgtacggt gaaggtattt cacgtgaagg
    17221 cgagcttgtt gatatggccg ctgaagtgga tgtaatcaat aagagtggtt catggtattc
    17281 ttacaaagaa gaacgtatcg gccaaggtcg tgaaaacgca aaacaatatc taaaagaaca
    17341 tacagatatt cgtgatgaga tttcaaaacg tgttcgtgaa gagtacgaaa tcgacggaag
    17401 caataaagaa cctttagatg aaggcgaaga aacattaagt ttactagatg atgaataaat
    17461 aatactaaat acgtgatagg aatttacttc ctgtcacgta ttttttacta tttaaaaaaa
    17521 actaaggaaa ataaccgtac atttcattcc ttttcttgac attgtatgct ttgacctata
    17581 aaattaagtt gtatatttta tattgctggg agacaagggg gaagtttttt cctttgaaaa
    17641 tcggcttcaa ctgaatgggg agattagcac tcggttgttg atgaaaaata cgcatgtgcc
    17701 agaattctgg ccaccgacat aacaataacg aaaattgaat agcaaaggag gtgtaaggat
    17761 gacaatcgca atcacgatca tctccagttt gcttttctta atcgtcggtc tagttgttgg
    17821 ttctctaatt tttaaatcta gtacagagaa aaaactggct gctgcaaggg ggactgcgga
    17881 attaattgta gaggatgcga agaaagaagc agaaactaca aaaaaagaag cattgcttga
    17941 agcgaaggaa gagaatcata ggttacgtac tgaaatcgaa aatgaacttc gtgggcgaag
    18001 aacagagaca cagaaagcag aaaatcgctt attgcaaagg gaggaaaacc tcgaccgtaa
    18061 agatacttct ttaagtaaac gagaagctac acttgaaaga aaagaggaga gtatcagtaa
    18121 acgtcaacaa caaattgaag agaaagaaag caaactagct gagatgattc aagcggagca
    18181 gacagaactc gaaagaattt ctgcgctcag caaagaggaa gcgaaatcta tcatccttaa
    18241 ccaggtagaa gaggaattaa cacatgatac agcaatcatg gtcaaagaat cagaaaaccg
    18301 ggccaaggaa gagtcggata aaaaagcaaa gaatattctc tcactagcta tccagcgttg
    18361 tgcagctgat catgtggcag aaacaacggt atctgttgtt accttaccaa atgatgagat
    18421 gaaaggtcgg attatcggac gtgaaggccg taatatccgc acgcttgaga cgttaacggg
    18481 gattgatttg ataattgatg atacaccgga agcagtaatt ctttccggat ttgatccaat
    18541 tcgacgtgaa atcgctagaa tcgccttaga aaaacttgtt caagatggaa gaatccatcc
    18601 agctcgaatt gaagaaatgg tggacaaagc ccgtaaagag gtggacgaac acattcgcga
    18661 agtcggggaa caagcaacat ttgaagttgg aattcattcc atccatcctg atttgataaa
    18721 aattcttggc cgcttgcgtt accgtactag ttacggacaa aacgttctta accactcact
    18781 cgaagtttca aaacttgcag gaattcttgc aggagagctt ggcgaagacg ttacgcttgc
    18841 taaacgggcc ggactacttc atgacatcgg gaaagcaatt gaccatgaaa ttgaaggcag
    18901 tcatgttgaa atcggcgtgg aacttgctac caaatacaaa gaaaatgatg tggtaatcaa
    18961 tagtattgct tcccatcacg gagatacaga agctacttct gttatcgcag tattggtcgc
    19021 agcggcagat gcactttctg ctgcaagacc gggagctcgt agtgaaacgc ttgaaaatta
    19081 catccgtcgt ttagaaaaat tagaagaaat ttctgagtct tacgatggtg tagaaaaatc
    19141 ttatgctatc caagcaggac gtgaagtacg tatcatcgtt gaaccagata caattgatga
    19201 tctttcttct taccgccttg ctcgcgacat aagaaaacga attgaagagg aattagatta
    19261 tcctggtcac attaaagtga ctgtcattcg tgaaacaaga gcagttgaat acgctaaata
    19321 ataattaaaa gatacatcgc aaatttattt tgcggtgtat ctttttttaa tcggttgcct
    19381 aggtcgagta agaacggtat aattaatgga taaacgaaaa agggaggcgg agtttttgag
    19441 tgagtgggaa attttgccta tgatagaaga gcactatccg ggagtagctg cagtccatca
    19501 agagggcatt gaaacaggaa acgctacttt tcaagagaag acactatcta tagaagcgtt
    19561 tgatgaaaag tacttaaaca cttgtcgatt ggttgtcctt atgaacggca aagtgattgg
    19621 ctgggcagcg ctgttaccat tttctagcat gcatgcttat cgaggagtag ctgaattaag
    19681 tatttatata gcaaaaagtg cccgtggaaa aggcattgga aaagcactta tgcatgaaat
    19741 tatccagaca agcgagcaga atggtttttg gacattgcaa tctttgattt ttccagaaaa
    19801 taaagctagc attgcgcttc atcatacata tggattccaa actttatgcg tccacgaaaa
    19861 attaggcgaa atgaatggcg tttttcggga tgttgcacta ttagaacgta gaagtaatag
    19921 aaacggagaa taaacaaaat gaaaatacta tttatcggtg atgttgtcgg ttctatcggc
    19981 cgcgatgcca taacagaata tttaccacaa ttaaagaaaa aatataaacc tactatcacg
    20041 gtgattaacg gtgaaaatgc agcgagcggg cgtgggatta cagagaaaat ttataaagat
    20101 tttctggagc ttggtgctaa tgctgtaaca cttgggaacc atacatggga taatcgtgat
    20161 atttttgaat ttatcgatga cgctaagtat ttagtgcgcc cagcaaactt tccagatgat
    20221 actacacctg gtacgggaat ggtttttgtg aaaagcaatc agcatgaaat tgccgttatc
    20281 aacatgcaag gtcggacttt tctagcagat ttagacgatc cattccgcaa aatggacact
    20341 ttgatagaag aagcaaagaa acgcactaat attatttttg tggattttca tgcagaaact
    20401 actagtgaaa aagaagcaat gggttggtat ttagatggtc gtgttacggc tgttgttggc
    20461 acgcatactc atgtgcaaac ttcggataac cgcattcttc cagaaggaac agcctatctg
    20521 acggatactg gtatgactgg tccatatgat gctatcctcg gaatggaaaa ggaagctgtt
    20581 atccgtcgat ttaaaacagc tttaccaact aggttcgaag ttcctaaaac tggtcgagca
    20641 gtcttgtcgg gctgtttaat cacacttgac gaaaatactg gaaaagcaca aaaaattgac
    20701 cgaattctca tcaatgaaga ccacccattt tcctttgatt aagaatggag atgaaattgt
    20761 gacagtttca aaagacgaaa tcatgaaaaa agctaccgaa cttcgtgatg cgcttcaaca
    20821 aacggaagaa gtatcgtttt accgtcttgc cgaggaaaga atcaatgcga actccaaagt
    20881 agcagcgaag gtttctaaaa taaaattact tcaaaaagaa gcagtaaatt tagagcatta
    20941 tcaaaaactt gaagcgatga aacaaaccga aaaccaaatt gataacgttc gcgcagatat
    21001 tgattcgctt ccgattgtaa cagaattcag acgcgctcaa gaagacgcca acgatctttt
    21061 acaatcgatt acaacagaaa tcactacaaa agtaactaca gagcttgaaa aagaaaatta
    21121 accacttaaa actgccaaaa catcggcagt tttttccttt tgcggtcgca gggaaatgaa
    21181 actttatgct ataatgagag gatgaaaaag aagtaaggga tgatgagata atgacagaat
    21241 atacaccaat gattaagcag tacttggaaa tcaaagacaa atatcaagat gctttcttat
    21301 ttttccgttt aggagatttt tatgaaatgt tttttgagga tgcactgaac gcttctcaaa
    21361 ttttagaaat tacattaact ggtcgtgaag gtgggacaaa agagaaaatc ccaatgtgcg
    21421 gggttccata ccattcagcg agcggctata ttgatacatt aattgaaaaa ggctataaag
    21481 ttgcgatatg tgagcaagtc gaggatccta aaacaaccaa aggcatggta aagcgagaag
    21541 tagtgcagtt aatttcacca ggaaccgtta tggacgaacg cggcttaaaa gcaaaagaaa
    21601 ataactatat cgcctccctt tattgctatg aaggcaaaga gtacggcttt gcttattctg
    21661 atttatcaac aggtgaatta aaatcaaccg taattgaagc tagcgaagat cgtttgatta
    21721 atgaactaac gacactttca acaagagaat tgattgtttc ttcctcggaa aaagaagtgc
    21781 tttcagatgt catgaaggag caactaggtt taactttttc tgtacacgaa gaagatacga
    21841 ttcctgtcga aaacgagaaa ttagtaaccc gccacatgtc attatccgaa aaacgtgcca
    21901 ttggtaagtt actccattat ttaaaagaaa cgcaaaagcg ggatttaggg catttacaac
    21961 aagctgtcca ttacgaaacg agcaattata tgaagatgga ctactattcc aaacgtaatt
    22021 tagaattagc agagtcgatt cgtggtaaag gtcgtcaagg tacgttactt tggcttctag
    22081 ataataccca aactgctatg ggcggaagaa tgctcaaaca atggattgat cgtccgttaa
    22141 tagatcgaaa aaaaatcatt gatcgacaaa atgatgttag cgaattaatg gcacactttt
    22201 tcgaacgcct agagttagta gaaaacttga aaaacgtcta cgatttagaa cgccttgctg
    22261 gtcgagttgc atacggcaat gtgaatgcac gagacttaat tcaattgcgt aattcgttat
    22321 atcagatccc tcgtattcgc gcgacactgt tgtcaatgag tagcgagagt ctcaccgaac
    22381 ttgccaacca attagatcca tgtgaagaac taaccgaaaa attagaagaa gcaatcatgg
    22441 attctgcacc gatttccatt cgggaaggcg ggattattaa agatggttat aatagccagt
    22501 tagatacgta ccgcgatgca agccgcaatg gaaaaacgtg gattgcagaa ttagaacgta
    22561 aagaacgtga actaacgggt attaaaacga tgaaggtagg atttaatcga gtattcggct
    22621 attatattga agttacacgt gcaaacacgc atctgctccc agaaggccgc tatgagcgca
    22681 aacagacact aacaaatgcc gaacgttata tcacgcctga actaaaagaa aaagaaaaac
    22741 tcattttaga tgcagaagaa aaaagcatgg aattagagta ccaattattt tctgaagtac
    22801 gagaaatggt aaaagactac atagaacgtc tgcaaaaatt agccaaatct gttagtgaaa
    22861 tcgattgcct gcaaagtttt gcggatatta gcgagaaaaa ccatttcatt cgtccgacat
    22921 taagcgaaga cggttccctg cacgtaaaac aaggtcgtca tcccgttgta gaaaaagtaa
    22981 tgggtgccca gagctatgta gcaaatgact gtgatttaga tgaaaatcgg gaaattttac
    23041 ttataactgg tcctaatatg tcaggtaaaa gcacttatat gcgccaagta gccttaacag
    23101 caatctgcgc gcaagttggt tgttttgttc ctgcagaaga agcgatatta ccaatttttg
    23161 accaaatttt cacgagaatt ggcgcagcag atgatctaat tgccggtcaa agtacattta
    23221 tggtagaaat gttagaagct agaaatgcca ttgttcacgc aacgaaagat agtttaattt
    23281 tatttgatga aattggtcgt ggaacagcta cttacgacgg aatggcgctt gctcaagcaa
    23341 tcattgaata tatccatgaa aatgtccatg ctaaaacact tttctccacc cattatcatg
    23401 aattaactga tttggagaaa gaactgagtg ggttacaaaa tattcacgtt agtgctgtag
    23461 aagaaaatgg caaagtagtt ttccttcata aaattaaaga aggcccagca gacaaaagtt
    23521 atggtattca tgtcgctgag ctagcagaat taccaaaatc acttattgaa cgagcgagcc
    23581 gtattttaga acaactggaa aatgacgata agaaaatcat tatcgctagc gtgaagcagc
    23641 cagaagaagt tcacgaagaa gtgcaactgt cgatgttccc agtggagcca gaaaagaaag
    23701 tatcttctaa agaaacaaaa ctactaaaag aaattgcctc catgaacatt atgcagatga
    23761 caccaatgga cgcgatgaat aaattatacg aacttcaaag taaaatccat taaaaagaaa
    23821 ggcgggtttt aaatggctaa acatattgtc gaattaaccg atgctctatc caataaaatt
    23881 gctgccggag aagtagtaga acgccctgct tcagtcgtta aagaattagt agaaaatgca
    23941 attgatgcag ggagcaccgt catagatatt ttagtggaag aagcgggatt aaataaaatt
    24001 accattattg ataacggtag tggcattgaa gaagaagatg tcgcaacagc ttttttacgt
    24061 cacgccacaa gcaaaatcaa aaacgaagca gatttattcc gtgtgcatac actaggattc
    24121 cgcggtgagg cacttccaag tattgcctct gtgtcccatt tagagatgga aacttccact
    24181 ggcgaagcaa aaggaacgac catttcttta gaaggcggga aaataatcga acaaaaaagc
    24241 ggacatgcta gaaaaggaac acaaatcgaa gtatcccagt tgttctttaa tacgccagca
    24301 cgcctaaaat atttgaaaag tttaccaacc gagcttggta acataaccga tattctaaat
    24361 cgcttagctt tggcgcatcc agatatcagt ttccgctttt cacacaacgg gaaaccttta
    24421 ttacaaacca atgggaatgg ggatttacgc caagtaattg cagcaattta cggtgtttca
    24481 attgcgaaaa aatcagtacc agttaaagca gagtcacttg attttaaaat ttctggatat
    24541 gctgtattac cagaagtgaa tcgctctaac cgtaattata tttcgaccat cattaacggt
    24601 cgttttatta aaaatttcgc attagtaaaa gctattcaag aaggatatca cacgctctta
    24661 ccaattggac gtttcccgat tatcgttctc caaatcgaga tggacccaat tattgtagat
    24721 gtaaacgttc atcctgctaa attagaagtc cgcttaagta aagaaaaaga attaggacaa
    24781 ctaattagtc aaatgattaa agagactttc cacaaattgc aactaattcc agatggagag
    24841 atttctaaaa aacaaaaaga agaccaaaaa tcggaacaaa tccaaatgtc ttttgaagaa
    24901 aataaacccg taaaagaaac accaactctt ttttcaaaac caactatccc ggaatatgtc
    24961 ccttcagatg aggatgctcc acgagaagat gattttattt tggaaacaat gccgtcctat
    25021 gaaccagaat ctcaagcgga gcaagaagag catacgaaag aacgtattcc taaaatgtat
    25081 ccaattggtc aaatgcatgc aacttatatt tttgcgcaaa atgaaaatgg cttatatatc
    25141 attgatcaac atgcagcaca ggaacggatt aaatacgaat tttatcgtga gaaaattgga
    25201 gaagttagtc gcgagttgca agaattactt gttcctattg tgcttgaatt tccagcggat
    25261 gagtatgttc gtttagaaga acaaaaagct aaattagaag aggtcggcgt tttcctagag
    25321 aacttcgggc aaaatagttt tatcattcgt gcgcatccaa cttggttccc gaaagaccaa
    25381 gaagaggaga tgcttcggga aattattgat gaagcgttat ccgctccaag cataagtatt
    25441 cataaattaa gggaagacac agctattatg atgagttgta aaaaatcaat taaagcaaat
    25501 cactatttaa caacgcaaga catggaagca ttactcgata cactgagaga agcaagcgat
    25561 ccattcactt gtcctcatgg acgtccggtg attatccaat actcaacata tgaactagaa
    25621 aaaatgttta aacgtgtgat gtaaaagagg aggaaataat ttggagttac cattttccaa
    25681 tcaatcaatc atcccagctg cacataatca aaaagatatg gaaaaaattt tagagcttga
    25741 tttgacatat atggtgatgc tggaaacaca tgtggctcaa ttaaaagcat tagtcaaata
    25801 cgcacaagcc ggcgggaaaa aagttttatt acatgccgat ttagtcaatg gactgaaaaa
    25861 tgacgactac gcaatagact ttttatgtac agaaatttgt cctgatggta ttatttcgac
    25921 tagaggaaat gccattatga aagctaaaca gcacaaaatg ctagccatac aacgtctttt
    25981 catgattgat tcaagcgcct ataacaaagg tgtagcattg atacaaaaag tccaacctga
    26041 ttgtattgaa cttttaccag gtattattcc tgagcaagta caaaagatga ctcaaaagct
    26101 tcatatccct gtaattgcag gaggattaat tgaaactagt gaacaagtca atcaagtaat
    26161 agctagcggg gccatcgcag ttacaacatc caataaacat ttatggtaaa taaacagcta
    26221 agtcgtgtag caataacgac ttagctgttc ttatgaaaaa caatgaaaac gctatattta
    26281 cccgtggaac attgctagac aacgttttaa gcggtttcta actgttctat ataaaatagc
    26341 cacctttaaa ctgtaccata acaggtaagg ggagttggag tggtacagca aaaattaata
    26401 attaaaataa aaacaaaatt agaatcataa taaattaggg aaatggctat ttaaaggtaa
    26461 ttttaagctt tttaagttta aaagacacaa aaaagtcata aaaaagtttg aaaaatattg
    26521 cacaaaactg tagcattttc cagagaatat gttatgataa cagtgtagat tatttataaa
    26581 ttagtttgct caaaaaagca cgctcgagaa tgaacaataa atggaggtta tatgatgact
    26641 gaacaatggt atgaattcgc aggtggtaac tggcaacaag aagtagatgt acgtgacttt
    26701 atcttaaaaa actatcgctt atatgacggt gacgacacat tcttagttgg cccaaccgaa
    26761 gcaactacaa aactttggga tcaagtaatg gacttaacta aaaaagaacg tgaaaacggt
    26821 ggcgtactgg atatggatac caaaatcgtt tcaaccatca cttcacatga cccaggttac
    26881 ttaaataaag atttagaaaa agttgtcggt gttcaaactg acgtaccttt caaacgcgct
    26941 ttacaaccat tcggcggaat ccgtatggca gaagttgcag ctgaatctta tggttttaaa
    27001 gtagacgaag aaattagtca tattttttct gaataccgta aaacgcataa ccaaggtgta
    27061 tttgatgctt atactgctga aatgcgcgca gctcgtaaat caggcgtaat tactggtctt
    27121 ccagatgctt atggccgtgg ccgtattatc ggtgactacc gtcgtgtagc actttacgga
    27181 gtagacttct taattaaaca aaagaaacaa gatttaaaca atacaggttt acgtacaatg
    27241 agcgatgacg ttatccgtca acgtgaagaa cttaacgaac aaattcgtgc tcttggcgaa
    27301 ttaaaagtac taggcgaaaa acatggtttc gatcttggtc gcccagctaa aactgcacaa
    27361 gaagctttcc aatggttata ccttggttac ttagcagcaa ttaaagaaca aaatggtgct
    27421 gctatgagct taggacgtac atctacattc cttgatattt atgtagaacg tgatcttcgt
    27481 aacggcttaa ttactgaaga agaagcgcaa gaaatcgttg accacttcat catgaaatta
    27541 cgccttgtaa aatttgctcg tacaccagat tacaatgaat tattctctgg agatccaaca
    27601 tgggttactg aatccatcgg tggtattaca gaagaaggcg ttccacttgt aacgaaaaac
    27661 tcattccgtt tcttacacac tttagataac ttaggacctg ctccagaacc aaacttaact
    27721 gtactttggt ccactcattt accatcagga ttcaagaaat tctgtgctaa aatgtctatc
    27781 aaaacatctg ctattcaata cgaaaatgac gatgttatgc gccctaaatg gggagatgac
    27841 tatgcaatcg catgttgtgt atctgcaatg cgcgttggta aacaaatgca attctttggt
    27901 gctcgtgcca accttgctaa aacacttctt tacgcaatca atggtggtat cgatgaaaaa
    27961 tctaaagcac aagttggacc tgcttatcgt ccagttgaag gcgacgtatt agactacaaa
    28021 gaagtaatgg aaaaatatga tgcaatgatg gaatggattg cagaacttta ccttaataca
    28081 ttaaatgtta ttcactatat gcatgataaa tacgcttacg aacgtatcga aatggcttta
    28141 catgatacag aagtattacg tactatggca actggtatcg ctggactttc tgttgcagct
    28201 gactccttat ctgctattaa atatgctact gttcgtccaa ttcgtgacga agatggcatc
    28261 gtggttgatt atgaaatcga aggcgactat cctaaatacg gaaataatga tgaccgtgta
    28321 gacgaaattg ctgtagaact tctaaaaaca ttcatgacta aagttagaaa acataaaact
    28381 taccgtgatg cagttcacac aacttctgtt cttacaatca cttctaacgt ggtttatggt
    28441 aagaaaactg gtaacactcc agacggacgt cgtgcaggag aaccatttgc accaggtgcg
    28501 aacccaatgc atggccgtga tacaaaaggt gctttagctt ctctatcttc tgttgctaaa
    28561 cttccttacg aatatggtca agatggtatt tctaacacat tctctatcgt accaaaagct
    28621 ttaggtcgcg aagacgaatc tcaaatcaat aacttagttg caatgctaga tggttattct
    28681 acaaaaatgg gacatcactt aaacatcaac gtattcaatc gtgatacatt acttgatgcg
    28741 atggatcatc cagaagagta tccgcaatta actatccgtg tatctggata tgcagttaac
    28801 ttcatcaaat taacacgtga acaacaatta gatgttattc accgtacaat gcacgaatcc
    28861 atgtaataat taggcgagaa cgctttggca aggattgctc accgtagcaa tccttgttat
    28921 ttaggaaagg aagaggagaa ttatgacaga ggttttagga agagttcatt cagtagaaac
    28981 aatgggaaca gtagacggtc caggtatccg ctttattgtt tttatgcagg ggtgtttact
    29041 tcgttgccaa ttttgtcata atcccgatac ttggaaaatt ggtactggca cagaacgttc
    29101 tgcccaagat gtatttgacg aagcaattaa gtataaagag ttttgggatg catcaggtgg
    29161 cggcgtgaca gttagtggcg gtgaaccgtt gcttcaagta gatttcctaa tcgagttttt
    29221 cacgctatgt aaagcagcag gagtgcacac aactattgat tcttgtggtg gttgtttcac
    29281 acgtgatccg gagtttattg agaaattgga tcgtttgatg gaagtaacgg atttaatttt
    29341 actggatatt aagcaaatca acccagaaaa gcatttaaaa ctgacaacga aatctaatgc
    29401 accaataatc gattttgctc attatttacg tgacaaagag caaccaattt ggattagaca
    29461 tgtactaatt ccaaccaaga cagatgatcc agaagattta acaaagctcc acgaattcat
    29521 tcaaactctt ccaaacgtaa aacaagtgga tgtgcttcca taccatacaa tgggtgttta
    29581 caaatggaaa gaaatgggca ttcgttatcc gttagaagga atcgaggcgc cagaagaaga
    29641 agtggtagca cttgccaata aaatcttaga aactagtagt tataaatagt aaaaaccggc
    29701 gaacttagta ttcgccggtt ttttatagta ttttatacat ttcctcacac cattttaatt
    29761 cggtttgaat caaatctaat cgtcttgcat agacttgata agacatgttt tttagcttgt
    29821 cttgtttggt ttttaggtca aataatttag cgaaatgatc cagtgtttct tcaattaaac
    29881 ctaattgctc ttttaaatag ctttctcttt cttgaataag ccctttggtt ctggcattgt
    29941 ttagccagtc aagctgtact tttgttgtaa attcatctcg tgtgacaggg attttaagtg
    30001 gtgtttcaga ccattcaagc agggagtcta agccggtttg tgtgatagta tagacttttt
    30061 tatcaggctt tttatcttgg gaatgcttat ggacaactaa aaaacctgct ttttctaact
    30121 tagataaaga aggataaatt tggctatgat gtgtattttg cataattcga agcctgtttg
    30181 cgagttcata accactagat gcttcacgag caatcatttg taataacgta tattctaaga
    30241 catttggtat catacaatag cacctctaaa tttctattta atcttattgt aagcgataaa
    30301 cactaataag taaaatggtt atatatgtaa taaattatat atgtaaatat tgacattagt
    30361 atttatcaag cgtaatataa taattgagtt ttatttagaa agggaagtgt agttgtatta
    30421 tgatgacaga caaggaaatg aatacgggga aatggataac agcagcagct agtttgcttg
    30481 cgtttatggg aataggggtt gttgatccac ttttaccttc tattgcagaa agtattgggg
    30541 catctcactc gcaagtagaa atgttattca ccgcttatat ttttactatg gcgattatga
    30601 tgattccgat tggtattgtt gccggaaagc ttggagataa aaagttaatc gttatcggac
    30661 tatttattgt tactattttt gcattattat gtggtttatc tgatacaatt ggtgctttat
    30721 ctatttttcg ggctggttgg ggttttggta actctatgtt catggctact gcgatgacaa
    30781 tgcttattgc tttatcagag acaccaggac atgcaattgg gatttacgaa gcttccatgg
    30841 gccttgggat ggcatttgga ccactactag gaggtattct aggtaatatt tcttggcgct
    30901 atccattttt tgcgacagct tgtctaattt ttatcgcatt tttacttatt ttatttaaag
    30961 taaaagaacc gaagaaagtc gcaccagcac ctacagagaa aaatgaggtt gctatcaagc
    31021 aaatgctcca tttattcaaa tatcgaccat ttttacaaat cgcttttagt ggaatgtttt
    31081 attattattg tttctttaca attttagctt attcgccact tattcttgga ttatcagcaa
    31141 ttcaaattgg ttttgtattt tttgcttggg gattatgttt ggcgttgggt tcggcaaaaa
    31201 tttcacatgc gttggagttt cgttttaata gcaaacaaat cttaaaagga tctttactgg
    31261 catgtgctgt tatcttagca ttacttggat ttattgataa tatagctgta gatataggtt
    31321 tgattgttat ttctggcttg attttaggaa tcaataacgc actatttaca accactgtta
    31381 tggaacattc accgtatgca agaagtgtga ctagtggagc atataatttt gtgcgttggt
    31441 taggcgctgc gtttgcgcca ctttgttctg ggttactcag cgaagcgctt ggtatgaaaa
    31501 tgccatttat cgtagcgagc gtcatttgtt tggcaggcat gggattacta tttattaaac
    31561 taaaaccatc acattttacc ttacaacaat ctacttctat agaaagtgaa taaaataata
    31621 aagagactga gtaatccggc tcagtct
//
LOCUS       DASDYO010000014        31534 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.014, whole genome shotgun sequence.
ACCESSION   DASDYO010000014 DASDYO010000000
VERSION     DASDYO010000014.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 31534)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 31534)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..31534
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.014"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            350..1249
                     /locus_tag="U0290_000587"
     CDS             350..1249
                     /locus_tag="U0290_000587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-binding protein"
                     /protein_id="HEM2300638.1"
                     /translation="MKLKKVAMGITVVMASSLLLVGCGSSDDSSKDKKSTDTKQTETK
                     KTAKTDGTMTDGTYKLEEKNFDDKGWKGFMSIEVKDGKITKANYDYKNKDGKLKSEDA
                     DYEKAMKDKVGTGPQEYLKQLSDSLVKNQSAASVEVVSGATHSSDAFINYANQLIQAA
                     QKADTTTISINNLAKMEDGTYKLEEQNYAHGYRVVFSMDVKDGKITKSDYNYVDKDGK
                     LKSDDADYEKNMKAKSGTGPKEYIPALNKSLVEKQDVAAVDTVSGATNSSNQFKIYAA
                     QLQNAAQNGNTDTIKVYNLVEAE"
     gene            1413..2495
                     /locus_tag="U0290_000588"
     CDS             1413..2495
                     /locus_tag="U0290_000588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD:protein FMN transferase"
                     /protein_id="HEM2300639.1"
                     /translation="MKKWKIIISVIILALVVSACGNSSKETKSEPSDSKKLMDQPYSK
                     TDFLMGTVVTLKIYDKGKEDVLDKGFDRIKDLAAKITTSDSEKTSEVDKINEQAGKKP
                     VKVSKDVYYLIQEGLKYSENSGGSFDITIGPLTSLWHIGFSDARKPSQAEIDAVLPLI
                     NYKDVKMNDKDQTVYLEKEGMELDLGAIAKGFITDETLKVFKENKVTTSIIDLGGNIY
                     VQGNNPNGNKWNVGIQDPFSPRGSVIGKLPESNMSIVTSGIYERYLEVDGKTYHHILD
                     PKTGYPFDNDIAGVSIVSKKSIDGDGLSTATFSKGVKGGMDYIEQFEGVDAIFISKEK
                     KVYETSGLKGQFELTDKDFQMDTLKK"
     gene            2577..3536
                     /gene="menA"
                     /locus_tag="U0290_000589"
     CDS             2577..3536
                     /gene="menA"
                     /locus_tag="U0290_000589"
                     /EC_number="2.5.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,4-dihydroxy-2-naphthoate
                     polyprenyltransferase"
                     /protein_id="HEM2300640.1"
                     /translation="MSIPSFLKLVEIQTKIASVFPFMLGTLFVVYQYDMFKPVNTLIF
                     FGSMLIFDLTTTAINNYMDYRKATDNHDYDYRTTSNVIGQEQIPVRTVIITIFLMFFI
                     ATGLGVWLVFRTDLLVLLIGFVCFCIGILYTFGPVPLSRMPLGEIFSGVTMGFGIFFL
                     AVYVNAYDAGIANLLWQGETVTIQFNLIEIIRIGVVSLPCIFTIANIMLANNLCDLDE
                     DIRNHRYTLPYYIGRKMGVLLFNALYYASFLAVVVSVAINFLHPIMLLSLITIYPVYR
                     NLVKFNKEQVKSKTFVIGIRNFVLINATLTILMAVSVVLQQLA"
     gene            3557..4357
                     /locus_tag="U0290_000590"
     CDS             3557..4357
                     /locus_tag="U0290_000590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466157.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HEM2300641.1"
                     /translation="MIEKLILGRFVPGESLIHGLDARTKLLAGFYYIGILFLANNWWT
                     YALMVLFTLMVIQMTGIKLKVFIKGVKPLIWLILFTVVMQILFASGGTIYFDWGPFTI
                     SSFGLLNGVFVFLRFVLIIMMSTVITLTTTPMNLTDAIAYILRPFAVLKVPVNDIALM
                     ISVALRFIPTLMGETDKIMKAQRARGVDFGEGNLFEQMKVVVPIFIPLFVSSFNRAEE
                     LADAMEARGYQGGEGRTRFRILHWHFGDLIAACVMILLTAGLVILRTS"
     gene            4719..5027
                     /gene="rpsJ"
                     /locus_tag="U0290_000591"
     CDS             4719..5027
                     /gene="rpsJ"
                     /locus_tag="U0290_000591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_001118669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S10"
                     /protein_id="HEM2300642.1"
                     /translation="MAKQKIRIRLKAYDHRILDQSAEKIVETAKRSGASVSGPIPLPT
                     EKSIYTVLRAVHKYKDSREQFEMRTHKRLIDIVNPTPQTVDSLMRLDLPSGVDIEIKL
                     "
     gene            5062..5691
                     /gene="rplC"
                     /locus_tag="U0290_000592"
     CDS             5062..5691
                     /gene="rplC"
                     /locus_tag="U0290_000592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L3"
                     /protein_id="HEM2300643.1"
                     /translation="MTKGILGRKVGMTQVFTENGELIPVTVIEAAQNVVLQKKTVETD
                     GYEAVQIGFEDKRAILSNKPEQGHVAKANTTPKRFIREFRDVNLDEYEIGAEVKVDVF
                     AEGDIIDATGVSKGKGFQGVIKRHGQSRGPMAHGSRYHRRPGSMGPVAPNRVFKNKLL
                     PGRMGGEQITIQNLEIVKVDVEKNVLLVKGNVPGAKKALVQIKTATKAK"
     gene            5717..6340
                     /gene="rplD"
                     /locus_tag="U0290_000593"
     CDS             5717..6340
                     /gene="rplD"
                     /locus_tag="U0290_000593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L4"
                     /protein_id="HEM2300644.1"
                     /translation="MPKLSLLKQDGTNAGEITLNDTVFGIEPNEKVVVDVILSQRASL
                     RQGTHKVKNRSEVRGGGRKPWRQKGTGRARQGSIRSPQWRGGGVVFGPTPRSYAYKLP
                     KKVRRLAIKSILSSKVNEEKLVVLEGLTFDAPKTKEFAAFLKNISVDTKALIVVAGES
                     ENVELSARNLQGITVIPAESISVLEVAKHDKLIITKAAVEKVEEVLA"
     gene            6340..6624
                     /gene="rplW"
                     /locus_tag="U0290_000594"
     CDS             6340..6624
                     /gene="rplW"
                     /locus_tag="U0290_000594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466153.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L23"
                     /protein_id="HEM2300645.1"
                     /translation="MDARDIIKRPVVTEESTSILDDKKYTFEVDTRATKTQVKYAVEE
                     IFDVKVAKVNVMNYKGKLKRMGRYAGYTNKRRKAIVTVTADSKEIQFFEV"
     gene            6665..7498
                     /gene="rplB"
                     /locus_tag="U0290_000595"
     CDS             6665..7498
                     /gene="rplB"
                     /locus_tag="U0290_000595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L2"
                     /protein_id="HEM2300646.1"
                     /translation="MAIKKYKPTTNGRRHMTSSDFAEITTSTPEKSLLRPLKKKAGRN
                     NQGKLTVRHHGGGHKRQYRVIDFKRNKDGIPGRVATIEYDPNRSANIALINYADGEKR
                     YIIAAKGLEVGQTIYSGAEADIKVGNALELKDIPVGTVIHNIEMKPGKGGQLVRSAGT
                     SAQVLGKEGKYVLIRLNSGEVRMILATCRATIGQVGNEQHELINIGKAGRSRWMGKRP
                     TVRGSVMNPNDHPHGGGEGKAPIGRKSPMSPWGKPTLGYKTRKKNNNSDKFIVRRRKK
                     K"
     gene            7586..7864
                     /gene="rpsS"
                     /locus_tag="U0290_000596"
     CDS             7586..7864
                     /gene="rpsS"
                     /locus_tag="U0290_000596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_000533765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S19"
                     /protein_id="HEM2300647.1"
                     /translation="MGRSLKKGPFVDDHLMKKVEAAAESEKKQVIKTWSRRSTIFPTF
                     VGQTIAVYDGRKHVPVYVQEDMVGHKLGEFAPTRTYRGHAGDDKKTKR"
     gene            7885..8241
                     /gene="rplV"
                     /locus_tag="U0290_000597"
     CDS             7885..8241
                     /gene="rplV"
                     /locus_tag="U0290_000597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466150.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L22"
                     /protein_id="HEM2300648.1"
                     /translation="MASEVTSAKAVAKTVRIAPRKARIVIDLIRGKQVGEAIAILKYT
                     PRSASPIIEKVLKSAIANAEHNYDLDINNLVVEEAFVDEGPTLKRFRPRAQGRASAIN
                     KRTSHITVVVSEVKEG"
     gene            8245..8901
                     /gene="rpsC"
                     /locus_tag="U0290_000598"
     CDS             8245..8901
                     /gene="rpsC"
                     /locus_tag="U0290_000598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S3"
                     /protein_id="HEM2300649.1"
                     /translation="MGQKVHPIGMRIGVIRDWDSKWYAEKDYADFLHEDLRIRDYVAK
                     RLSDASVSRVEIERAANRVNITIHTAKPGMVIGKGGSEVEALRKNLNELTQKRVHINI
                     VEIKRADLDAKLVAENIARQLEGRVSFRRAQKQAIQRTMRAGAKGIKTQVSGRLGGAD
                     IARAEHYSEGTVPLHTLRADIDYAWEEADTTYGKLGVKVWIYRGEVLPTKKNNVEGGK
                     "
     gene            8904..9338
                     /gene="rplP"
                     /locus_tag="U0290_000599"
     CDS             8904..9338
                     /gene="rplP"
                     /locus_tag="U0290_000599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L16"
                     /protein_id="HEM2300650.1"
                     /translation="MLVPKRVKYRREFRGNMRGRAKGGTEVAFGEYGLQAVEASWITN
                     RQIEAARIAMTRYMKRGGKVWIKIFPHKSYTSKPIGVRMGKGKGAPEGWVSPVKRGKI
                     MFEIAGVPEDVAREALRLAAHKLPVKTKIVKREEIGGEANES"
     gene            9328..9519
                     /gene="rpmC"
                     /locus_tag="U0290_000600"
     CDS             9328..9519
                     /gene="rpmC"
                     /locus_tag="U0290_000600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L29"
                     /protein_id="HEM2300651.1"
                     /translation="MKANDIRDLSTTEIQDQEKALKEELFNLRFQLATGQLENTARIR
                     EVRKAIARMKTIVRERELA"
     gene            9547..9810
                     /gene="rpsQ"
                     /locus_tag="U0290_000601"
     CDS             9547..9810
                     /gene="rpsQ"
                     /locus_tag="U0290_000601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011064531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S17"
                     /protein_id="HEM2300652.1"
                     /translation="MADRNQRKVYTGRVVSDKMDKTITVVVETYKKHGLYGKRVKYSK
                     KFKAHDENNIAKTGDVVRISETRPLSATKHFRLLEVVEEAVII"
     gene            9890..10258
                     /gene="rplN"
                     /locus_tag="U0290_000602"
     CDS             9890..10258
                     /gene="rplN"
                     /locus_tag="U0290_000602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012727667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L14"
                     /protein_id="HEM2300653.1"
                     /translation="MIQQESRMKVADNSGAREVLTIKVLGGSGRKTANIGDVVVCTVK
                     QATPGGVVKKGEVVKAVIVRTKSGARRQDGSYIKFDENACVIIRDDKSPRGTRIFGPV
                     ARELRENNFMKIVSLAPEVL"
     gene            10296..10607
                     /gene="rplX"
                     /locus_tag="U0290_000603"
     CDS             10296..10607
                     /gene="rplX"
                     /locus_tag="U0290_000603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L24"
                     /protein_id="HEM2300654.1"
                     /translation="MHVKKGDKVKVITGKDKGKSGKVLAAFPKKDRVLIEGINMVKKH
                     TKPSNINPQGGILNVEAPIHVSNVMLIDPKTGEPTRVGYEVKGDKKVRVAKKSGEVID
                     K"
     gene            10634..11173
                     /gene="rplE"
                     /locus_tag="U0290_000604"
     CDS             10634..11173
                     /gene="rplE"
                     /locus_tag="U0290_000604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L5"
                     /protein_id="HEM2300655.1"
                     /translation="MNRLKDQYLKEIVPALMSKFNYDSVMEVPKIDKIVINTGVGDAT
                     ANAKVLDSAVEELALITGQKPVITKAKNSIAGFRLREGMPIGAKVTLRGERMYDFLDK
                     LVTVSLPRVRDFRGVSKKAFDGRGNYTLGVREQLIFPEIDYDQVSKVRGMDVVIVTTA
                     KSDEESHELLTQLGMPFQK"
     gene            11205..11390
                     /locus_tag="U0290_000605"
     CDS             11205..11390
                     /locus_tag="U0290_000605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011245027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type Z 30S ribosomal protein S14"
                     /protein_id="HEM2300656.1"
                     /translation="MAKKSMIAKQKRTPKYAVQAYTRCERCGRPHSVIRKFKLCRICF
                     RELAYKGQIPGVKKASW"
     gene            11421..11819
                     /gene="rpsH"
                     /locus_tag="U0290_000606"
     CDS             11421..11819
                     /gene="rpsH"
                     /locus_tag="U0290_000606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003241998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S8"
                     /protein_id="HEM2300657.1"
                     /translation="MVMTDPIADFLTRIRNANMVKHDKLELPASKIKKEIAEILKREG
                     FIRDVEYIEDDNAGTIRVFLKYGATGERVITGLKRISKPGLRVYAKSTEVPKVLNGLG
                     IAIVSTSQGVLTDKEARAKQVGGEVLAYVW"
     gene            11850..12386
                     /gene="rplF"
                     /locus_tag="U0290_000607"
     CDS             11850..12386
                     /gene="rplF"
                     /locus_tag="U0290_000607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L6"
                     /protein_id="HEM2300658.1"
                     /translation="MSRIGKKTIVIPAGVTVTLNGSTATVKGPKGELVKEFNPEITIN
                     IEGNEINVSRPTDNKNHRALHGTTRAILNNMVVGVSEGYEKKLELIGVGYRAQKQGDK
                     LVLNVGYSHPVEFVAPKGVDIEVPANTQVIVKGYNKEHVGELAANIRAVRPPEPYKGK
                     GIRYEGEHVRRKEGKTGK"
     gene            12426..12785
                     /gene="rplR"
                     /locus_tag="U0290_000608"
     CDS             12426..12785
                     /gene="rplR"
                     /locus_tag="U0290_000608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L18"
                     /protein_id="HEM2300659.1"
                     /translation="MITKIDKNKVRKKRHARVRSKISGTESRPRLNVFRSNKNIYAQI
                     IDDVNGVTLASASNLDKDFGSAESKVDAASKVGELVAKRASEKGITSVTFDRGGYLYH
                     GRVKALAEAARENGLEF"
     gene            12807..13310
                     /gene="rpsE"
                     /locus_tag="U0290_000609"
     CDS             12807..13310
                     /gene="rpsE"
                     /locus_tag="U0290_000609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S5"
                     /protein_id="HEM2300660.1"
                     /translation="MPEQIDGNKLDLEERVVTINRVAKVVKGGRRFRFTALVVVGDKN
                     GHVGFGTGKAQEVPDAIRKAVEDAKKNMVLVPTVDTTIPHTVVGHFGGGEILLKPASA
                     GSGVTAGGPVRAVLELAGVADVSSKSLGSNTPINMVRATIDGIKQLKNAEDVAKLRGK
                     TVEELLG"
     gene            13327..13506
                     /gene="rpmD"
                     /locus_tag="U0290_000610"
     CDS             13327..13506
                     /gene="rpmD"
                     /locus_tag="U0290_000610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L30"
                     /protein_id="HEM2300661.1"
                     /translation="MAKLEITLKRSLIGRPQPQRKTVQALGLGKTNSVVVKEDNPAIR
                     GMITKVSHLVDVKEV"
     gene            13562..14002
                     /gene="rplO"
                     /locus_tag="U0290_000611"
     CDS             13562..14002
                     /gene="rplO"
                     /locus_tag="U0290_000611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L15"
                     /protein_id="HEM2300662.1"
                     /translation="MKLHELKPSEGSRKERNRVGRGTGSGNGKTSGRGHKGQKARSGG
                     GVRLGFEGGQLPLFRRIPKRGFTNINRKEFAIVNLDVLNRFEDGTEVTPELLVETGII
                     RNEKSGIKILSNGNIEKKLTVKANKFSAAAKEAIEAAGGKTEVI"
     gene            14002..15297
                     /gene="secY"
                     /locus_tag="U0290_000612"
     CDS             14002..15297
                     /gene="secY"
                     /locus_tag="U0290_000612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecY"
                     /protein_id="HEM2300663.1"
                     /translation="MFQTLVNFFKVADIRKKILFTLAMLVIFRIGTFVPVPGVNAAAL
                     QSSMDGGILGFLNTFNGGALKNFSIFAMGVMPYITSSIIVQLLQMDVVPKLTEWSKQG
                     EMGRKKLNQLTRYMTIGLGLVEAFGMAYGFNRMSSAGLVIEPSIGRYAIIAIVLTTGT
                     MFLMWLGEQITVKGVGNGVSIIIFAGIVARIPDGVRQLYVSQIENAGDQLFLHVLTLV
                     GVGIAILAIVVAVIFFQQALRKIPIQYSKRVAGAKQSGAQATHLPLKLNSAGVIPVIF
                     ASAFIITPQTILTFFDQSNDVVKVLKDVFDYTKPIGMILYVALIVAFTYFYAFIQVNP
                     EKVADNLKKQGGYIPSKRPGRETQAYLTSVLYRLTFVGAIFLSAVAILPTIGTTVFSL
                     PQSLAVGGTSLLIVIGVALDTTKQLEGQLVKRNYRGFIK"
     gene            15357..16004
                     /locus_tag="U0290_000613"
     CDS             15357..16004
                     /locus_tag="U0290_000613"
                     /EC_number="2.7.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466134.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylate kinase"
                     /protein_id="HEM2300664.1"
                     /translation="MKLVLMGLPGAGKGTQAEQIVEKYNIPHISTGDMFRAAMKNNTE
                     LGKKAKSFMDNGDLVPDEVTNGIVRERLAEDDAKNGFLLDGFPRTVEQAEELENILND
                     LGTELDAVINIEVDKDVLMKRLTGRWICRTCGKTYHEIYNPPKVPGKCDLDGGELYQR
                     DDDKKETVEKRLNVNMKQTKPLLDFYSEKGKLHNINGEQDIKDVFVDVEKILASF"
     gene            16391..16609
                     /gene="infA"
                     /locus_tag="U0290_000614"
     CDS             16391..16609
                     /gene="infA"
                     /locus_tag="U0290_000614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-1"
                     /protein_id="HEM2300665.1"
                     /translation="MAKEDVIEVEGVVQETLPNAMFNVELENGHKVLATVSGKIRMHY
                     IRILPGDKVTVELSPYDLTRGRITYRFK"
     gene            16713..16826
                     /gene="rpmJ"
                     /locus_tag="U0290_000615"
     CDS             16713..16826
                     /gene="rpmJ"
                     /locus_tag="U0290_000615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003720928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L36"
                     /protein_id="HEM2300666.1"
                     /translation="MKVRPSVKPMCEKCKVIRRKGKVMVICENPKHKQKQG"
     gene            16845..17210
                     /gene="rpsM"
                     /locus_tag="U0290_000616"
     CDS             16845..17210
                     /gene="rpsM"
                     /locus_tag="U0290_000616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012748902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S13"
                     /protein_id="HEM2300667.1"
                     /translation="MARIAGVDVPREKRIVISLTYIYGIGKQTAKEVLAEAGVSEDTR
                     TRDLTEEELGKIREILDRIKVEGDLRREVNLNIKRLIEIGSYRGMRHRRGLPVRGQNT
                     KNNARTRKGPSKTVAGKKK"
     gene            17233..17622
                     /gene="rpsK"
                     /locus_tag="U0290_000617"
     CDS             17233..17622
                     /gene="rpsK"
                     /locus_tag="U0290_000617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S11"
                     /protein_id="HEM2300668.1"
                     /translation="MARKTNTRKRRVKKNIESGIAHIRSTFNNTIVMITDTHGNALAW
                     SSAGSLGFKGSRKSTPFAAQMAAESAAKSAQEHGLKTLEVTVKGPGSGREAAIRALQA
                     AGLEVTAIKDVTPVPHNGCRPPKRRRV"
     gene            17732..18676
                     /locus_tag="U0290_000618"
     CDS             17732..18676
                     /locus_tag="U0290_000618"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003178382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit alpha"
                     /protein_id="HEM2300669.1"
                     /translation="MIEIEKPKIETIEISDDAKYGKFVVEPLERGYGTTLGNSLRRIL
                     LSSLPGAAVTSIQIDGALHEFSVIEGVVEDVTTMILNIKKLALKIYSDEEKTLEIDMQ
                     GPGVVTAADINYDSDVEILNPDLHIATLSDNAKFHVRLNATRGRGYTPADQNKRENMP
                     IGVLPVDSIFSPVIRVNYQVENTRVGQSTNYDKLTFDVLTDGSISPEEAVSLGAKILS
                     EHLSIFVNLTDEAQKAEIMIEKEESHKEKVLEMTIEELDLSVRSYNCLKRAGINTVQE
                     LADKSEDDMMKVRNLGRKSLEEVKVKLADLGLSLRNEN"
     gene            18693..19100
                     /gene="rplQ"
                     /locus_tag="U0290_000619"
     CDS             18693..19100
                     /gene="rplQ"
                     /locus_tag="U0290_000619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L17"
                     /protein_id="HEM2300670.1"
                     /translation="MGYRKLGRTSSQRKALLRDLATDLIVFERIETTEARAKEIRKVV
                     EKLITSGKKGDLHARRQAAAFIRHEVVEVVQVDAKGKDGSTVKKNRPVYALQKLFDDV
                     APRYAERQGGYTRILKKGPRRGDGAPMVIIELV"
     gene            19315..20409
                     /locus_tag="U0290_000620"
     CDS             19315..20409
                     /locus_tag="U0290_000620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix DNA-binding domain-containing
                     protein"
                     /protein_id="HEM2300671.1"
                     /translation="MRSLTNAEIAHNRLLNSGLLQSKFSSAEDATRALFGIQSQYQQF
                     GEISLFNRVPNLTKENLQMAYDDKGIIKIWGQRMTVHMYTPDDWFYVHDVYANKNNWL
                     RKHADSLGRDLDEILVQMEELLLREDKVSKESFAALLGNEAKELMTWGGVFIQGSLDG
                     KLFCVPESPKTKFYSHRNQIDSEREDAWITNKRSKTGLETMIDRYFSAFGPATIQDFK
                     HWSGLRNSDYIETLEKLLENYICYIGEDGKNYYSKAKTQENVEMGSPLLLGKFDPLFV
                     SYAKKNWLASEKETSLIWRTAGQIEAVLIINAQFFGTWRYKISGDKIVFQFYLSKKLT
                     KKGQKLVEKEAIKLAEFLLKNYQGSIFEQI"
     gene            complement(20441..21331)
                     /locus_tag="U0290_000621"
     CDS             complement(20441..21331)
                     /locus_tag="U0290_000621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466126.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetamidase/formamidase family protein"
                     /protein_id="HEM2300672.1"
                     /translation="MKNFVTSERAVFKMDKSAEPAITVKDGSVVKIKTKDYFNGQIQN
                     KQLQYGDLDWKQFSPTTGPIYIEEARSGDLLAVTIEKIELLGTEVFLLNGPNVGITDD
                     LLTSNYTRCYKVRENRIMYSDEIHIPITKTIGLLRTEGLLTSKSPANNDGLLDSSEIT
                     EGATIFLPVEKQGASLYIGNVRATAGFGKTTTTSAEAPAEITLRLQILKNRTAPTPTI
                     IHDNHLICLASDLTIEKAAKKAMQNMITLLTESDKMTTEDAMFLLSLQAEFQVCNMGK
                     ANITTSIKLPLDYFPEMPFL"
     gene            complement(21452..22114)
                     /locus_tag="U0290_000622"
     CDS             complement(21452..22114)
                     /locus_tag="U0290_000622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MgtC/SapB family protein"
                     /protein_id="HEM2300673.1"
                     /translation="MLADFILRLVVAGLLGAIIGLDREIRAKEAGFRTHFLVSLGSAL
                     IMIVSQYGFSEIATMQNVSFDPSRVAAQVVSGIGFIGAGTIIIQKKFVRGLTTAAGLW
                     ATAGIGLAIGAGMYWVGIAATLLTLIGLEFLSIVFKSFAFHTTAIIYSTDKQENLVKV
                     TDKIQQNKQQIVSYSSEKELIGESLFIRVNIVVKTKNKNDEYELFHFIQTLPNVTVEK
                     ME"
     gene            22245..23084
                     /locus_tag="U0290_000623"
     CDS             22245..23084
                     /locus_tag="U0290_000623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HEM2300674.1"
                     /translation="MAESFVRLEHVFYKYEDTEKYAVKDVSISAQKGEWVALVGHNGS
                     GKSTIAKLLNGLLFPEDGLIKIGHFVLSEKNIWDIRRQVGMVFQNPDNQFVGATVQDD
                     VAFGLENHGVPHDTMVERVESALNEVGMQSYALHEPARLSGGQKQRVAIAGVLALQPD
                     VIILDEATSMLDPRGRAEVMETIRIMREQEDITVISITHDLDEVLFADRVIVMNNGEV
                     HSEGTPQEIFEQADAMREIGLGVPFIIELQEKLVAGGFETGSTVLSEGALLDQLWKLN
                     SNN"
     gene            23060..23926
                     /locus_tag="U0290_000624"
     CDS             23060..23926
                     /locus_tag="U0290_000624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor ABC transporter
                     ATP-binding protein"
                     /protein_id="HEM2300675.1"
                     /translation="MEIKLEQLGYCYQKNSPFEKRALLDVNVSFDSGSYSAIIGHTGS
                     GKSTLLQHLNALLMPTEGKITVGDREIVAGVKQKKLRDLRKKVGIVFQFPEAQLFEET
                     VEKDICFGPMNFGVSEEDAKLRAKKVIYEVGLTEEILSRSPFELSGGQMRRVAIAGVL
                     AMDPEVLVLDEPTAGLDPHGREEIMEMFYNLHKEKGLTTVLVTHSMEDAARYAEKIVL
                     MKAGTVLQIGTPREVFAKPDELVDLGLSVPDVVRFQGLFERKFDVKLTKTCLTIDELT
                     TEMAPYLAKGGA"
     gene            23929..24726
                     /locus_tag="U0290_000625"
     CDS             23929..24726
                     /locus_tag="U0290_000625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupling factor transporter transmembrane
                     protein EcfT"
                     /protein_id="HEM2300676.1"
                     /translation="MMDKMILGRYIPGNSWLHRIDPRAKITAVMAFIAIVFLANNWLT
                     YALMFAYVLYLVLTSKVPFLFFIKGLQPIFWLILITLLLQVFFTKGGTVLVDLGLLQI
                     TTLGLTNGAMMFCRFVLIIFMTTLLTLTTSPIELTDGLEKILAPFRLVHLPVHELALM
                     LSISLRFIPTLMDETEKILKAQKARGVEFTSGKWSDRIKAIIPLLVPLFISAFKRAED
                     LAIAMEARGYRGGKGRTRFRLLRWRFADTLLLISLVVLSGLLFWLRS"
     gene            24732..25478
                     /gene="truA"
                     /locus_tag="U0290_000626"
     CDS             24732..25478
                     /gene="truA"
                     /locus_tag="U0290_000626"
                     /EC_number="5.4.99.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(38-40) synthase TruA"
                     /protein_id="HEM2300677.1"
                     /translation="MTRYKAIISYDGSGFYGYQVQPNTRTVQAEIEKALTKMHKGKTV
                     RITASGRTDTGVHAKGQVIHFDSELDITAEKFQKALQVMTPFDISFLTVEEVPDDFHA
                     RFGTVGKEYRYVVKRTKIFDPFSRNFALHYPYELDISKMKLASKRLIGEHDFTSFCSA
                     RTERDSKVRTLYSIDFYEEDDETLVIAFQGNGFLYNMVRILTGTLLDAGQGRISPDDI
                     SEALLARDRQKLISKTAPPQGLYLWRVDYE"
     gene            25673..26110
                     /gene="rplM"
                     /locus_tag="U0290_000627"
     CDS             25673..26110
                     /gene="rplM"
                     /locus_tag="U0290_000627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L13"
                     /protein_id="HEM2300678.1"
                     /translation="MRTTYMAKPGEVERKWYVIDATGVSLGRLSSEVASILRGKNKPQ
                     FTPHIDTGDFVIIINAGKIGLTGKKATDKIYYRHSQYPGGLKSRTAGEMRTNNPEKLL
                     ELSIKGMLPKNSLGRQLFKKLHVYGGAEHEHAAQQPEVYELRG"
     gene            26132..26524
                     /gene="rpsI"
                     /locus_tag="U0290_000628"
     CDS             26132..26524
                     /gene="rpsI"
                     /locus_tag="U0290_000628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002009728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S9"
                     /protein_id="HEM2300679.1"
                     /translation="MAQVQYYGTGRRKSSVARVRLVPGDGKIVINNRDWEDYIPFAAL
                     REVIKQPLVATETLGNYDVLVNVHGGGYTGQAGAIRHGVARALLQVAPEYRPALKSAG
                     LLTRDPRMKERKKYGLKGARRAPQFSKR"
     gene            complement(26593..27633)
                     /locus_tag="U0290_000629"
     CDS             complement(26593..27633)
                     /locus_tag="U0290_000629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002406008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM2300680.1"
                     /translation="MASIVKRGKSYRAQVSLYKHGQHKKISQTFSTKKEENLWALEME
                     LAKGEGKELAHRTTTFADFFENWIYLVKVNDVKETTFQNYVRTLGIIRNLFQDIQLKD
                     LNDIVVQKKVDEYAKTHSRKTTHEVLLKIKTSLRDAYARGYIANDFARLVKTRGEKPP
                     KRNKALSITDFRKLRNYVLQHPEDEFNLLVLLALETGMQRGELLAIRPESLYEYGIKV
                     RHSISPTSDDTSLKTLNAKRDVSINKEVYELIRKIPVKEDGYIFSFGGFKQSEQLAEL
                     LKKLDIKKTTFHGLRDTHASFLFAQDIDIAYVSKRLGHINIQTTQNYYLELMPEKKHQ
                     QDADALNLLSAL"
     gene            complement(27953..28150)
                     /locus_tag="U0290_000630"
     CDS             complement(27953..28150)
                     /locus_tag="U0290_000630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300681.1"
                     /translation="MNKPQVRSNINHIIKMADSVLKDENTINKRTSDSDYQKHIYTPE
                     AILANIKDSAESALKALNEYE"
     gene            complement(28158..28664)
                     /locus_tag="U0290_000631"
     CDS             complement(28158..28664)
                     /locus_tag="U0290_000631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEM2300682.1"
                     /translation="MTHLRHEAEKLDDWVRYEAEYKGRYAHQLTDAIENCKSDEELKN
                     IIVSSILDRYGFYYTKESKKGKINRPTIETKKMLDLLNNNDFKFDSPSPRNNMLNQTI
                     NYIQKNSGLFPLLWKVDGIWGDGTYKELLEWLGDQYYNSFEPNDDHISWLNKYKALYQ
                     LEGKPWEG"
     gene            complement(28661..28828)
                     /locus_tag="U0290_000632"
     CDS             complement(28661..28828)
                     /locus_tag="U0290_000632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation factor domain-containing
                     protein"
                     /protein_id="HEM2300683.1"
                     /translation="MINDEKKFKKNQSKIRDVSSNFNAQTIYIGKRGENIDAMLRIYD
                     KKAEQLGSSKR"
     gene            complement(28821..29293)
                     /locus_tag="U0290_000633"
                     /pseudo
     CDS             complement(28821..29293)
                     /locus_tag="U0290_000633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_002305065.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            complement(29554..30456)
                     /locus_tag="U0290_000634"
     CDS             complement(29554..30456)
                     /locus_tag="U0290_000634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300684.1"
                     /translation="MRVTQSKLNGFYVFGSTLMLIVIWILLAYQNESMNQVFKAVGIN
                     FRIELQKVNNIFFVAVTMIIFPTILFWSLRNKIWEGKRALKRYFLILNLRKEMIDANY
                     RDERHVTERVVQMPTIKVEFDNKEMTSGKLIVRDSLEFHDRLAKATFTPSLKGFKVED
                     FYLSDDGDWWIYNFYSVNSQIQAVFDSLEEYLNWSNETTNKFQLRIDNRLSFDLKHTL
                     LVGATRSGKTYGLIGLLLQMINKLIHYELFFADPKNDQLRKIGNWINGKNTAYTTENI
                     IDLIDSYNNGEKDPVSLWKRTQLQ"
     gene            complement(30531..30908)
                     /locus_tag="U0290_000635"
     CDS             complement(30531..30908)
                     /locus_tag="U0290_000635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300685.1"
                     /translation="MARLPNQYLFVKTVVDAERLFDEKTKSYVVVELRDAYEYADGKI
                     TDNVIGKNVTLMCTRDEEDYGVTKAGKKIPNLKFKQFDIKILNGAFEVPKGTRVKMDL
                     GKLEKAVGYKTTLVNKYRLYLKI"
     gene            31159..>31534
                     /locus_tag="U0290_000636"
     CDS             31159..>31534
                     /locus_tag="U0290_000636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300686.1"
                     /translation="MHWIDLKFGYRFDEKKDNLISESTWRKYLDDFFNYKNNKEGTLT
                     KYTDMLRGGNRNREYHIDFIKEIIEFKKDDLIEHLNSNKKTIKNPSLEYFAEEMNLKF
                     DTQDKFIKGTFIKRGRVIKTQYK"
BASE COUNT        10127 a         5580 c         6506 g         9321 t
ORIGIN      
        1 cctactaatg tctagatagt aaagaacaat tctaatctaa atttgaaaaa taggactttg
       61 tgcaaatgtt acataattaa gcaggctaaa agtccttgtt taacatagga tgttagacat
      121 ttttgtttgc tattttgcta gaaaaggttg gctttaactg ttatatatat accaatagtc
      181 attattttga aaattagatg aattatgtct ttagaattac agtagacaaa accgggcgct
      241 gatggtatca tttgtattgt aaaagtgata tcgctttcgc agactatcgg tttgtgttca
      301 cgaaatcaca aacaaagtta atcaataaaa caaaaggtgg gagcaaaaca tgaaattgaa
      361 aaaagtagca atgggtatta ccgtggtaat ggcttcaagt ttattactag taggttgcgg
      421 tagcagtgac gacagcagca aagacaaaaa gagcacagac acaaaacaaa cagaaacaaa
      481 gaaaacagct aaaactgatg gtactatgac tgatggtact tacaaattag aagaaaagaa
      541 tttcgacgac aaaggctgga aaggtttcat gtcaatcgaa gttaaagatg gtaaaattac
      601 aaaagctaac tacgattaca aaaacaaaga tggcaaatta aaatctgaag atgcagacta
      661 cgaaaaagca atgaaagata aagtaggaac tggtcctcaa gaatacttga aacaattaag
      721 cgattcttta gttaaaaatc aatctgcagc atctgtagaa gtagtttcag gagcaactca
      781 ttcttctgac gctttcatca actatgctaa ccaattaatc caagcagctc aaaaagctga
      841 tacaactaca atttccatca acaacttagc taaaatggaa gatggaactt ataaacttga
      901 agaacaaaat tacgcacatg gttaccgtgt agtattcagc atggatgtta aagatggcaa
      961 aatcactaaa tctgactaca actatgttga caaagacggc aaacttaaat cagacgatgc
     1021 tgactacgag aaaaacatga aagctaaatc tggtactggt ccaaaagaat acatcccagc
     1081 acttaacaaa tctcttgttg aaaaacaaga cgttgctgca gtagacactg tttctggtgc
     1141 tactaactct tctaaccaat tcaaaatcta cgcagctcaa cttcaaaatg ctgcacaaaa
     1201 tggtaacact gacacaatta aagtgtacaa cctagtagaa gctgaataat tagcgaaatt
     1261 tatgtacaaa acggctggtc ctaatttcta gggctagccg atttttttat cgaaaaacag
     1321 aggaattaag cctttttact gtagatttat tccttttttt acgctatagt tattcaagta
     1381 aagatcacgg atttagaaag gtgaaaaagc taatgaagaa atggaaaata ataatttcag
     1441 ttatcatatt ggcgcttgtt gtatcagcgt gtggaaattc tagtaaagaa acaaagagtg
     1501 aaccaagtga ttcaaaaaaa ctaatggatc aaccatactc caaaacagac tttctaatgg
     1561 gcacagtagt aacgcttaaa atttatgata aaggcaaaga agacgtgctt gataaaggct
     1621 tcgatcgaat caaagatcta gctgccaaga ttaccacaag tgattcggaa aaaacgtctg
     1681 aagtggataa aatcaacgaa caagccggca aaaaaccagt gaaagtatct aaagatgtat
     1741 actacttaat tcaagaaggg cttaaatact ccgagaactc tggtggtagc ttcgatatta
     1801 ctattgggcc gttaacatct ctatggcaca tcggtttttc tgatgcgcgc aaaccttctc
     1861 aagcagaaat tgacgcggtg ttaccattaa ttaattacaa agacgttaaa atgaatgata
     1921 aagaccaaac agtatacttg gaaaaagaag gtatggaact agatttaggg gcaattgcta
     1981 aaggcttcat tactgacgag actttaaagg tattcaaaga aaataaagta acaacctcta
     2041 tcatagattt aggtggaaac atttatgttc aaggcaacaa cccgaatggc aacaaatgga
     2101 atgtcggaat tcaagatccg ttttctccgc gtggaagtgt tattgggaaa cttcctgaat
     2161 ctaatatgtc tatcgtaact tctggtattt atgaacgtta ccttgaagtg gatggtaaaa
     2221 catatcatca catcttagac ccgaaaacag gatatccgtt tgacaatgat atcgctggag
     2281 tttcgattgt atctaaaaaa tcaattgatg gcgacggtct atccaccgct actttctcca
     2341 aaggggttaa aggtggcatg gactacattg aacaatttga aggtgtagat gctattttca
     2401 tcagtaaaga gaaaaaagta tacgaaactt ctggcttaaa aggtcaattc gaattaacgg
     2461 ataaagactt ccagatggac acgctaaaaa aataaactat tattatagaa gaaagtgagc
     2521 agaattcgct ctggattctg ctcacaataa actagaaaag gggctaaaaa ggggatatgt
     2581 caataccatc gtttctgaag ttggttgaaa tccaaacgaa gatagctagt gtttttccgt
     2641 ttatgttagg aacgctattt gttgtgtatc aatatgatat gttcaaacct gttaatacgt
     2701 tgatattttt cggatctatg ctcatattcg acttgactac aacagcgatt aataactata
     2761 tggattaccg caaagcaaca gacaatcatg attacgatta tcgaactacc agcaatgtaa
     2821 ttgggcaaga gcaaattccg gtgcgaacag ttattataac tattttcttg atgttcttca
     2881 ttgctacagg attaggtgtt tggttagttt ttcgaacaga tcttttagtg ctcttaattg
     2941 gatttgtctg cttttgtata ggcatcttat atacattcgg tcctgtaccg ctttctcgta
     3001 tgccgttagg tgaaattttt tcaggcgtaa cgatggggtt tgggattttc ttcttagctg
     3061 tatatgtaaa tgcatacgac gcgggaatag cgaatttact ttggcaagga gaaacggtga
     3121 caatccagtt caatctaata gaaattattc ggataggtgt ggtatcctta ccttgtattt
     3181 tcacaatagc taatatcatg ctcgcgaata atctctgtga tttagatgaa gatattcgga
     3241 atcatcgtta cacacttccg tattatatag gaagaaaaat gggagtctta ttatttaatg
     3301 ctttatatta tgcttcattt ttagctgtgg ttgtttcggt agctataaac ttcttacatc
     3361 caatcatgtt actatcacta ataacaatct atccagtgta tcgtaatcta gttaaattca
     3421 ataaagaaca agtaaaatca aaaacatttg ttattggtat tcgtaatttc gtattaatta
     3481 atgcgacatt gacaatttta atggcggtga gcgtggtact tcaacaactg gcgtaaagaa
     3541 aagggggctt ctttgaatga ttgaaaaact aatattaggt cgttttgtcc caggggagtc
     3601 cttaattcat ggtctggatg cgcgaacgaa acttttagca ggcttttatt atatcggcat
     3661 tttattttta gcgaataact ggtggacata cgccttaatg gttttgttca cactcatggt
     3721 cattcaaatg acaggtatca agttaaaagt gtttataaaa ggtgtaaaac cacttatttg
     3781 gctaatttta tttacagtag taatgcaaat actatttgcg agtggcggaa cgatttattt
     3841 tgattggggt ccatttacaa tctcttcatt tgggcttttg aacggggtat ttgtgttttt
     3901 gcgctttgtc ttaattatca tgatgtcgac cgttatcacg ctcacaacga cgcctatgaa
     3961 cctgacagac gcaattgctt acatccttcg tccgtttgct gtactcaaag tgccggtgaa
     4021 tgacattgca ttaatgattt cggtggcact tcgctttatt ccaaccctta tgggagaaac
     4081 agataaaatt atgaaagcgc agcgagctcg cggagtggat tttggtgaag gtaatctttt
     4141 cgaacaaatg aaagttgttg tcccgatttt tattccgtta tttgttagtt cgtttaaccg
     4201 agcggaagaa ttagcggatg caatggaagc gagagggtat caaggaggcg aagggcgcac
     4261 gagattccga atattgcatt ggcattttgg agatttgatt gcggcatgtg taatgatact
     4321 tttaaccgcg ggactcgtaa tactaagaac atcttaaaaa cattcgatat taacggatgt
     4381 ttttttcttt tggataaaat gagcagaatg gctctgtcag acagtttgaa gataaaccaa
     4441 aaccgagaat cttctatata atagttccta tgaaaataac ttaaaacttt tttcaaaaag
     4501 cggttgatta ctatccctaa cccgtgtata atagataaag tgcaaatgga caggcattgg
     4561 tctgcccttt tgacaacgag caccccggta ttgccgggaa tgcccatgtg atgaagtgaa
     4621 aggttgctga cacacccggc cgctttgcca tggcggatgt tcaggtaatt ttcacggaga
     4681 atgtctactt taaaagtagg cgaaaaggag ggaaagtaat ggcaaaacaa aaaattcgta
     4741 ttcgtttaaa agcttatgat caccgtattt tggatcaatc agcagaaaag attgtagaaa
     4801 cagcgaaacg ctcaggtgct tctgtatctg gtccgatccc acttccaaca gagaagtcaa
     4861 tctacacagt cttgcgtgcg gtccacaaat ataaagactc tcgtgagcaa ttcgaaatgc
     4921 gtacacacaa acgtttaatc gacatcgtta atccaacacc acaaacagtt gatagcttga
     4981 tgcgtttaga cttgccaagc ggtgtggaca tcgaaatcaa actataataa gaatatatta
     5041 aattaacagg aggtgtgact catgaccaaa ggaatcttag gtagaaaagt agggatgaca
     5101 caagttttca ctgaaaacgg cgaacttatt ccagtaacag taatcgaagc agcacaaaac
     5161 gtggtacttc aaaagaaaac tgttgaaact gacggctatg aagctgtaca aatcggtttc
     5221 gaagataaga gagcaatttt gtcaaacaaa cccgaacaag gtcatgtagc aaaagccaat
     5281 actactccta agcgcttcat tcgcgaattc cgcgatgtaa acttagacga gtatgagatt
     5341 ggtgcagaag taaaagtaga cgtattcgca gaaggtgaca tcatcgacgc gacaggcgta
     5401 tcgaaaggta aaggattcca aggtgttatt aaacgccacg gacaatcacg cggccctatg
     5461 gcccacggtt cccgttacca tcgtcgccca ggttcaatgg gtccagtagc acctaaccgt
     5521 gttttcaaaa ataaactact tccaggtcgt atgggtggag aacaaatcac tatccaaaac
     5581 ctagaaatcg ttaaagtaga cgttgaaaag aacgttcttt tagtaaaagg taacgttcca
     5641 ggcgctaaaa aagcattagt tcaaattaaa actgctacta aagcaaaata attcatttgg
     5701 aaaggaggac taacgaatgc caaaattaag cttacttaaa caagatggaa caaacgctgg
     5761 cgaaattact ttaaacgaca ctgttttcgg tatcgaacca aatgaaaaag ttgttgttga
     5821 tgtgattttg agccaacgtg catccctacg tcaagggact cacaaagtaa aaaatcgttc
     5881 agaagtacgt ggtggcggac gtaaaccatg gcgtcaaaaa ggtacaggtc gtgcccgtca
     5941 aggttcaatc cgttccccgc aatggcgtgg cggtggtgtc gtattcggcc caacacctcg
     6001 ttcatatgca tacaaattac ctaagaaagt tcgtcgttta gcgattaaat caattctttc
     6061 ttctaaagta aatgaagaaa aattagttgt acttgaaggt ttgactttcg atgcacctaa
     6121 aacaaaagaa tttgcggctt ttcttaaaaa tatctctgta gatactaagg cactaatcgt
     6181 agttgccggt gaaagtgaaa atgtagaatt atctgcacgc aacttacaag gcattacagt
     6241 tattccagct gaaagtatct cagtactaga agttgctaaa catgataaat taattatcac
     6301 taaagcagct gtcgaaaaag tagaggaggt gctcgcataa tggatgcacg cgacatcatt
     6361 aagcgcccag ttgtaactga agaatctaca agtattctcg acgataagaa atatacattt
     6421 gaagtagata ctcgcgcaac taaaacgcaa gtaaaatacg cagttgaaga aattttcgac
     6481 gtaaaagttg ctaaagtaaa cgtaatgaat tacaaaggca aacttaaacg tatgggccgt
     6541 tatgcaggtt acactaacaa acgccgtaaa gcgattgtta ctgttacagc tgacagcaaa
     6601 gaaattcaat tctttgaagt ataattcgac taactttaaa taaatctaac gaggagggga
     6661 aacaatggcg atcaaaaagt ataaacctac cactaacggg cgccggcaca tgactagttc
     6721 tgatttcgct gagattacta caagtactcc agaaaaatct ttactacgtc ctcttaaaaa
     6781 gaaagccgga cgcaataacc aaggtaagtt aactgttcgt catcacggcg gtggccataa
     6841 acgccaatac cgcgtgattg atttcaaacg taacaaagat ggtattcctg gacgcgttgc
     6901 aacgatcgag tacgatccaa accgttctgc taatattgct ctaatcaact atgctgatgg
     6961 agaaaaacgc tacatcatcg cagcaaaagg ccttgaagta ggtcaaacaa tttattcagg
     7021 agcagaagct gatatcaaag tcggtaatgc actagaatta aaagatattc cagtgggtac
     7081 tgttatccac aatatcgaaa tgaaacctgg taaaggtgga caattagtac gttctgctgg
     7141 aacaagtgct caagtgcttg gtaaagaagg taaatacgta ttaatccgct taaactctgg
     7201 tgaagttcgc atgattcttg ctacttgccg tgctacaatc ggtcaagttg gtaacgaaca
     7261 acacgaactt atcaacatcg gtaaagcagg tcgttcacgt tggatgggta aacgcccaac
     7321 tgttcgtgga tctgtaatga acccgaacga tcacccacac ggtggtggtg aaggtaaagc
     7381 tccaatcggc cgtaaatcgc caatgtctcc atggggtaaa ccaactcttg gatacaaaac
     7441 acgtaagaaa aacaacaact ccgataaatt tatcgtacgt cgtcgtaaga aaaaataatc
     7501 ggatcaatag attgaataaa attggtagca ggatagcgag gacatgcgtt ctcagcttcc
     7561 tgactatgcg aagggaggtt ccgtcatggg tcgtagtttg aaaaaaggac cttttgttga
     7621 tgaccacttg atgaagaaag tggaagcagc agcagaaagc gaaaagaaac aagtaattaa
     7681 aacttggtct cgtcgctcca cgattttccc aacttttgtt ggacaaacaa tcgcagtata
     7741 tgatggacgt aaacacgttc ctgtttatgt tcaagaagat atggtaggac acaaactggg
     7801 cgaattcgca ccaactcgta cgtaccgcgg tcatgcgggc gacgataaaa aaactaaacg
     7861 ctaatttgag aggaggatat cctaatggca agtgaagtta caagcgcaaa agccgttgcc
     7921 aaaacggttc gtattgctcc tcgcaaagct agaatcgtca ttgatttaat tcgaggcaag
     7981 caagttggcg aagcaattgc aatcttgaag tatactccaa gatcagcttc cccaattatt
     8041 gaaaaagtat taaaatctgc tattgctaac gcagagcata actatgattt agacattaac
     8101 aaccttgtag tagaggaagc atttgttgac gaaggtccaa cacttaaacg tttccgtcca
     8161 cgtgcacaag gtcgtgcaag tgcaatcaac aaacgtacta gccacatcac agttgtggta
     8221 tctgaagtga aggagggata attcgtgggt caaaaagtac atccaatagg tatgcgtatc
     8281 ggtgtcatcc gtgattggga ctccaaatgg tacgcggaaa aagattatgc ggacttctta
     8341 catgaagatt tacgcatccg tgattacgtt gcaaaacgtc tatctgacgc ttctgtttct
     8401 cgtgtagaaa tcgaacgtgc agctaaccgt gtgaatatca ctattcatac tgcaaaacct
     8461 ggtatggtta tcggtaaagg tggttctgaa gttgaagcat tacgcaaaaa cttgaacgaa
     8521 cttactcaaa aacgtgttca tatcaatatc gtagaaatca aacgtgctga cctagacgca
     8581 aaattggttg ctgaaaatat cgctcgtcaa ttggaaggtc gtgtatcttt ccgtcgtgcg
     8641 caaaaacaag ctatccaacg tactatgcgt gctggagcaa aaggtatcaa aactcaagta
     8701 tctggtcgtc ttggcggagc ggatatcgct cgtgctgaac actatagcga aggaacagta
     8761 cctcttcata cattgcgtgc cgacatcgac tacgcatggg aagaagctga cacaacttat
     8821 ggtaaactag gcgttaaagt ctggatctac cgcggtgaag tccttcctac gaagaaaaac
     8881 aatgtggaag gaggaaaata ataatgttag ttcctaaacg tgtaaaatac cgtcgtgaat
     8941 tccgcggaaa catgcgtgga cgcgcgaaag gcggaactga agttgcattt ggtgaatacg
     9001 gtcttcaagc agttgaagct tcttggatta caaaccgtca aatcgaagca gctcgtatcg
     9061 caatgactcg ttacatgaaa cgtggcggta aagtttggat taaaattttc cctcataaat
     9121 cttacacttc taaaccaatc ggggttcgga tgggtaaagg taaaggtgct ccggaaggtt
     9181 gggtaagccc agtcaaacgt ggcaaaatta tgtttgaaat cgcaggtgtt cctgaagatg
     9241 tagcgcgtga agcattacgt ctagcagcac acaaactgcc ggtcaaaact aagatcgtta
     9301 aacgtgaaga aattggtggt gaagcaaatg aaagctaatg atatccgtga tttatccact
     9361 accgaaatcc aagatcaaga aaaagctttg aaagaagagc tcttcaacct gcgctttcaa
     9421 ttagctactg gtcaattaga aaacaccgca cgtattcgtg aggttcgtaa agcaattgcc
     9481 cgtatgaaaa caatcgttcg agaaagagaa cttgcttaaa aaagaatcgt aaggaggttt
     9541 taatacatgg ctgaccgtaa ccaacgtaaa gtttatactg gtcgtgttgt atccgacaaa
     9601 atggataaaa caattaccgt ggttgttgaa acgtacaaga aacatggttt gtacggtaaa
     9661 cgcgtgaagt attctaaaaa attcaaagcg catgatgaaa ataacattgc aaaaactggc
     9721 gatgtagttc gtatttccga aactcgtcca ttgtctgcaa ctaaacattt ccgtttacta
     9781 gaagttgtag aagaagcagt aattatctaa atcaaaagtt aaaaatagat tgtgaaaagt
     9841 tgccgagtgc aatttttccg acccgttatt ctggaaggag ggtgtcctaa tgattcaaca
     9901 agaaagtcgt atgaaagtgg ctgataactc tggtgctcgt gaagtgttaa ctattaaagt
     9961 actaggtgga tcaggacgca aaactgctaa cattggcgat gttgtcgtgt gtaccgttaa
    10021 acaagcaaca ccaggcggcg ttgtcaaaaa aggtgaagtt gttaaagcag taatcgttcg
    10081 tactaagagt ggagcacgtc gtcaagacgg ttcttacatc aagtttgatg aaaatgcatg
    10141 tgtcattatc cgtgacgata aaagtcctcg tggaacacgt atttttggac ctgttgctcg
    10201 cgaacttcgt gaaaacaact ttatgaagat cgtttcttta gctccagaag ttctttaaaa
    10261 aataagttcc aagaaatcaa ggaggtgcta taccaatgca tgtcaaaaaa ggtgataaag
    10321 taaaagttat tactggtaaa gataaaggca aatccggcaa agtgctcgca gcatttccga
    10381 aaaaggaccg cgtacttatc gaaggaatca atatggttaa aaaacataca aaaccttcca
    10441 acatcaaccc gcaaggcgga atcttgaatg ttgaagcacc aatccacgtt tcaaacgtaa
    10501 tgctaattga ccctaaaaca ggcgaaccta ctcgtgtagg atacgaagtt aaaggcgata
    10561 aaaaagtacg cgtagcaaaa aaatccggtg aagtaataga taaataatag tcgtaggaag
    10621 gagggaatat tacatgaatc gccttaaaga tcaatatctt aaggaaattg ttcctgcttt
    10681 aatgagcaaa ttcaattatg actccgtaat ggaggttcca aaaatagata aaatcgtaat
    10741 caacactggt gttggtgacg ctacagcaaa tgcgaaagtt ttagacagtg cagttgagga
    10801 gttagctctt atcactggtc aaaaacctgt aatcacaaaa gcaaaaaatt ctatcgctgg
    10861 tttccgtctt cgtgaaggaa tgccaatcgg tgctaaagta actttgcgtg gtgaacgcat
    10921 gtatgatttc ttagataaat tagttactgt ttcacttcca cgtgttcgtg atttccgtgg
    10981 cgtatcgaaa aaagctttcg atggtcgtgg taactatacg ttgggtgtta gagagcaact
    11041 tattttccct gaaattgatt acgatcaagt atcaaaagta cgcggtatgg acgtagtaat
    11101 cgttacaact gccaaaagtg atgaagaatc tcatgagtta ctaactcaac tagggatgcc
    11161 atttcaaaag taatcaaaac taattttagt agggaggcga aaacgtggct aagaaatcca
    11221 tgatcgcgaa gcaaaaacgt acaccaaaat acgctgttca agcatatact cgttgtgaac
    11281 gttgtggtcg tccacattcc gttattcgca aatttaaatt atgccgtatt tgtttccgtg
    11341 aacttgccta taaaggtcaa attcccggcg tgaaaaaagc aagctggtaa gaaagagttt
    11401 aaggaaggag ggtattatac atggtgatga cagatccaat tgcagatttt ctaactcgca
    11461 ttcgtaatgc aaacatggtt aaacatgata aattagaact gcctgcatcc aaaatcaaaa
    11521 aagaaattgc tgaaatattg aagcgtgaag gttttatccg tgacgttgaa tatattgaag
    11581 atgacaatgc tggaacaatc cgtgttttct taaaatatgg agcgactggc gaacgtgtaa
    11641 tcactggttt gaaacgtatt agtaagccag gtttacgtgt atatgcaaaa tcaactgagg
    11701 tgcctaaagt acttaacggt ctaggtatcg caatcgtgtc tacttcccaa ggcgttttaa
    11761 ccgacaaaga agcccgtgct aaacaagtcg gcggagaagt actagcatac gtttggtaag
    11821 aaaaagtaaa ccataaggag gtgcaataaa tgtcccgtat aggtaaaaaa actattgtga
    11881 ttcctgcagg tgtaacagtt acacttaatg gatcaacagc aacagttaaa ggtcctaaag
    11941 gtgaacttgt aaaagagttc aacccagaaa ttactattaa tattgaaggc aacgaaatta
    12001 acgtttctcg cccgactgat aataaaaacc accgtgcact tcatggtaca actcgtgcta
    12061 ttcttaataa catggttgtc ggagtttccg agggttatga aaagaaatta gaacttatcg
    12121 gtgttggtta ccgtgcgcaa aaacaaggcg acaagcttgt tcttaacgta gggtactctc
    12181 atccagtaga gtttgttgct cctaaaggcg tagatattga agttcctgca aacacacaag
    12241 tgattgttaa aggatacaac aaagaacacg ttggcgagtt agctgcaaac attcgtgccg
    12301 tacgtccacc agagccatat aaaggtaaag gtattcgtta cgaaggcgaa catgtacgcc
    12361 gtaaagaagg taaaactggt aaataatgcc gcttaattag gcaaatgaga gaagaggtga
    12421 gtcgtgtgat taccaaaatc gacaaaaata aagtacgtaa aaaaagacat gctcgtgttc
    12481 gttctaagat ttctggaact gaaagtcgtc cacgtttaaa cgtattccgt tcaaacaaaa
    12541 acatttatgc tcaaattatt gatgatgtaa atggtgtgac acttgcaagt gcgtctaatt
    12601 tagataaaga tttcggttct gctgaatcca aagttgatgc agcaagcaaa gttggcgaac
    12661 tagttgctaa acgtgcttcc gaaaaaggta ttacttctgt cacttttgac cgtggaggat
    12721 acttatatca tggccgcgtg aaagctcttg ctgaagcagc tcgcgaaaat ggactagaat
    12781 tttaataaga aggagggaca tattacatgc ctgagcaaat tgatggaaac aaattagatt
    12841 tagaagaacg cgttgttaca atcaaccgtg ttgctaaagt agttaaaggt ggacgtcgtt
    12901 tccgtttcac agcacttgtt gttgttggag acaaaaatgg tcatgttggt ttcggtactg
    12961 gtaaagcgca agaagttcca gatgctatcc gtaaagctgt tgaggatgct aaaaagaaca
    13021 tggtgcttgt accaactgta gacacaacta ttccacacac tgtagtcgga cattttggtg
    13081 gcggggaaat tcttcttaaa ccagctagtg ccggttctgg tgtaactgct ggtggtcccg
    13141 ttcgtgcggt cctagaactt gccggtgttg ctgatgtatc ttccaaatcg cttggatcta
    13201 atacaccaat taacatggta cgtgctacaa tcgacggaat taaacaactg aaaaacgctg
    13261 aagatgttgc gaaacttcgt ggcaaaacag tagaagaatt gttaggataa ggagggaatt
    13321 atcattatgg cgaagttaga aattactcta aaacgtagct taatcggacg ccctcaacca
    13381 caacgcaaaa ctgttcaagc attaggtctt ggtaaaacaa attctgtagt ggttaaagaa
    13441 gataatcctg caattcgtgg gatgatcact aaagtaagtc atttagtgga cgtcaaagaa
    13501 gtttaagctt aaaattatta tgcaatggat agaatttgtt aaataggagg aggtgcttga
    13561 catgaaacta catgaactta agccttcaga aggttctcgt aaagaacgta atcgtgttgg
    13621 tcgtggaaca ggctctggta acggcaaaac ttcaggacgc ggtcataaag gacaaaaagc
    13681 tcgttctggt ggtggcgtac gtttaggctt tgaaggtgga caacttccac ttttccgtcg
    13741 tattccaaaa cgtggattca caaatatcaa ccgtaaagaa tttgctatcg tgaacttaga
    13801 tgttttaaac cgctttgaag atggtacaga agtaacacca gaacttttag ttgaaactgg
    13861 aattattcgt aatgaaaaat ccggaatcaa gattttatct aatggaaata tcgagaaaaa
    13921 acttactgtg aaagcgaaca aattctctgc agctgcgaaa gaagcaattg aagcggctgg
    13981 cggaaaaact gaggtgatct aatgtttcaa acgttagtta acttcttcaa agtagcagac
    14041 atccgtaaaa aaatactatt tacattagca atgctagtta ttttccgtat tggtacattc
    14101 gtgccagtac cgggagttaa cgcagcagct ttacaatcta gtatggatgg cggtattttg
    14161 gggttcttaa atacatttaa tggtggggct ttaaaaaact tctcaatttt tgccatgggt
    14221 gtaatgcctt acattacatc ttccattatt gttcagttac ttcaaatgga cgttgttcct
    14281 aaattgactg agtggtcgaa gcaaggggaa atgggtcgta aaaaactcaa tcaacttact
    14341 agatacatga caattggact tggtttagtg gaagctttcg gtatggcata tggatttaac
    14401 cgcatgtctt cagctggctt agtaattgaa ccttccattg gtagatatgc aattatcgct
    14461 attgtattga ctactggtac aatgttctta atgtggctag gtgaacaaat cactgttaaa
    14521 ggcgttggta atggtgtttc catcattatc tttgcaggta tcgttgctcg tattcctgat
    14581 ggagttcgtc aattatatgt ttcgcaaatt gaaaacgctg gtgatcaact tttcctacat
    14641 gttctgacat tagttggtgt agggattgca attttagcta ttgttgtagc tgtaatcttc
    14701 ttccaacaag cactacgcaa aattccaatt caatactcta aacgtgtagc aggagcaaaa
    14761 caatcgggcg cgcaagcaac gcacttgccg ttaaaactta actctgccgg agttatccct
    14821 gttatctttg caagtgcatt tattattaca ccacaaacta tccttacttt ctttgatcaa
    14881 agtaacgatg ttgtaaaagt attgaaagat gtgtttgatt acacaaaacc aattggtatg
    14941 attttatatg ttgcactaat tgttgctttc acttatttct atgctttcat tcaagtgaac
    15001 cctgagaaag ttgcagacaa cttgaaaaag caaggtgggt atattcctag taaacgtcct
    15061 ggtcgggaaa cacaagctta tcttacatcg gtactttacc gtctaacatt tgttggtgca
    15121 attttccttt cagcggttgc tatacttcca actatcggta ctactgtgtt tagtttaccg
    15181 cagtcacttg ccgttggtgg tacaagccta ctaattgtta tcggggtagc attagatact
    15241 acgaaacaac tcgaaggaca acttgtaaaa aggaactatc ggggatttat caaataacac
    15301 gcagttcttg ttaggtcttc ctagcaggag ctagcgcgta ataaggggcg aaacagttga
    15361 aattagtatt aatgggactg cccggcgccg gaaaaggcac acaagcggaa cagattgttg
    15421 agaaatacaa cattcctcat atttccactg gagatatgtt ccgagcagct atgaaaaata
    15481 atacggaatt aggaaagaaa gctaaatcct ttatggataa tggcgacctt gttcctgatg
    15541 aagtaacaaa tggtatcgtt cgtgaacgtt tggccgaaga tgatgctaag aatggtttct
    15601 tgcttgatgg ttttccgcgc actgtggaac aagcagaaga gctagaaaat attctaaatg
    15661 atttagggac agaacttgat gctgtcatta acattgaagt tgataaagat gttttaatga
    15721 aacgtcttac aggtcgttgg atttgtcgga cttgcggtaa gacttaccat gaaatttaca
    15781 acccaccgaa agttcctggg aaatgtgatt tagatggcgg agaactttac caacgcgatg
    15841 acgacaagaa agaaacggtt gaaaaacgac taaatgtaaa tatgaaacag accaagccgc
    15901 ttctagattt ttattctgaa aagggtaaac ttcataacat aaacggcgag caagacatta
    15961 aagacgtttt tgtagatgtg gaaaaaattc ttgcttcttt ttgaggagtg agctgtgctg
    16021 aatcactgtc aaaatcaatg cgtgcaaatt agtttagttt gtagtataat ggataattgg
    16081 cagtggaatt aaaggcatct aagcaaatca tgatgaacga gagaaccgtt tgaagatcat
    16141 ccgaatgacg tatatgttct accttgatct gttcagccgc aatacttttg cgagtgacag
    16201 ttcttctggt ttttacggat ttcactttta caggttgtct gaaaagctgg cgaaatgtgt
    16261 tgccttttaa tgaagtgcat ccatttttgc atgttttacg tttttttcat gtaagagaaa
    16321 tagttacact gaaaggatta ggcctgcatc aggaacaaat ccaagaatac aagaaggagg
    16381 tagcaaacat atggcaaagg aagatgttat tgaagtagaa ggcgtagtac aagaaactct
    16441 accaaacgcg atgttcaacg ttgaactcga aaatggtcat aaagtactgg caactgtttc
    16501 tggtaaaatc cgtatgcatt acattcgtat tttacctgga gataaagtga cagtagagct
    16561 ttctccatac gacctgacac gcggaagaat tacttatcgt tttaaataat ttgcactccg
    16621 aaattgaatt tatataccgg tctggtttat ccagcttaga aattatcggt ttatagagac
    16681 attttctcta ataaacaagg aggtatatct atatgaaagt aagaccatca gtgaaaccta
    16741 tgtgcgaaaa atgtaaagtt attcgtcgta aaggtaaagt aatggtaatt tgtgaaaatc
    16801 caaaacataa acaaaaacaa ggataagagg aggtgcttaa gtaaatggca cgtattgcag
    16861 gtgtggacgt tccacgtgaa aaacgtattg ttatttccct gacttacatt tatggtatcg
    16921 gtaaacaaac agctaaagaa gttcttgctg aagctggcgt ttctgaagat actcgtactc
    16981 gtgatttaac tgaagaagag ctaggtaaaa tccgtgaaat cttagaccgt attaaagttg
    17041 aaggtgacct tcgtcgtgaa gtaaacttaa acattaaacg tctaatcgaa atcggttctt
    17101 accgtggcat gcgtcaccgt cgtggacttc cagttcgcgg acaaaataca aaaaataatg
    17161 cccgtactcg taaaggcccg tccaaaacag tagcaggcaa aaagaaataa tagtaaagga
    17221 ggtagttagt gaatggctcg taaaacaaat actcgtaaac gccgtgtgaa aaagaatatc
    17281 gaatctggta ttgcacacat ccgttctaca tttaataata cgatcgtaat gattactgac
    17341 acacatggta atgctttagc ttggtcaagt gcaggttccc taggatttaa aggttctcgt
    17401 aaatctactc ctttcgcagc gcaaatggca gctgaaagtg cagcaaaatc agcacaagaa
    17461 catggtttaa aaacattaga agtaactgtt aaaggtcctg gttcaggtcg tgaagcggct
    17521 atccgtgcac tacaagcagc tggtcttgaa gtaacagcta ttaaagatgt aactccagtt
    17581 ccacataacg gatgtcgtcc tccaaaacgt cgtcgcgtat aagtggtcgt tttcttttgc
    17641 caatagtaga tttttactgt cttaactatc aaggcagaga gtttgacata aagactgata
    17701 ttctagacgt tttgaaggag ggtaaatttg aatgatcgaa attgaaaagc caaaaatcga
    17761 gacgattgag atcagcgatg atgccaagta tggaaagttt gttgtagagc cacttgagcg
    17821 tggatatggt acaactttgg gtaactcctt acgtcgtatt ctattatctt ctcttccagg
    17881 tgcagcagta acctctatcc aaattgatgg agctttacat gagttttctg taattgaagg
    17941 tgtagtagaa gatgtaacaa ccatgatttt aaatattaaa aaacttgcac taaaaatcta
    18001 ttctgatgaa gaaaaaacat tagaaatcga tatgcaaggt cctggtgtag taactgcagc
    18061 tgacattaat tatgacagcg acgttgagat tttaaatccc gacttacaca ttgctacatt
    18121 aagtgataat gctaaatttc atgtgcgttt aaatgcgact cgtggtcgtg gttacacacc
    18181 tgctgatcaa aataaacgcg aaaatatgcc aattggtgta cttccagtcg attcaatctt
    18241 ttcaccggtt atccgtgtga actatcaagt ggaaaataca cgtgttggac aatcaactaa
    18301 ttatgataag cttacgtttg atgtgttaac tgacggaagt atcagcccag aagaagcagt
    18361 ttcacttgga gctaaaattc tttctgagca cttaagtatc ttcgttaact taacagatga
    18421 agcacaaaaa gctgaaatta tgattgaaaa agaagaaagc cataaagaga aagtgcttga
    18481 aatgactatt gaagaattag acttgtctgt tcgttcatat aattgtttga aacgcgctgg
    18541 aatcaataca gtacaggaac ttgctgacaa atccgaagac gatatgatga aagtccgtaa
    18601 cttgggccgt aaatcgcttg aggaagttaa agtaaaactg gctgaccttg gcttatctct
    18661 aagaaacgaa aactgataaa ggaggcaatt ccatgggtta cagaaaatta ggtcgtacaa
    18721 gctcacaacg taaagcgtta ctacgtgatc ttgcaacgga tttaatcgta tttgaacgta
    18781 ttgaaacaac agaagctcgc gctaaagaga ttcgtaaagt tgttgaaaaa ctaatcactt
    18841 ctgggaaaaa aggagacttg cacgctcgtc gtcaagcagc tgctttcatc cgtcatgaag
    18901 ttgtagaagt agtacaagta gatgctaaag gtaaagatgg ttcaactgtg aagaaaaacc
    18961 gtcctgtata cgctctacaa aaactatttg atgatgttgc tccacgttac gcggaacgtc
    19021 aaggtggtta cactcgtatc ttgaaaaaag gtccacgtcg cggtgacggc gcaccaatgg
    19081 ttattattga attagtttaa taataaaacg tttaaagcaa gtggagtgtc atgatatgga
    19141 gacttcgtgt ttccttgtct agctctgtgt ttcctagtct acttaatcgt aggctaggag
    19201 gcaggctttt tttgtttgac ctgttatcta tgtatagcag gtcttttttt cttgccttta
    19261 tactggaaac catctatagt aaattccaaa gataaacagt gggagggacg gagaatgcgt
    19321 tcgttaacta acgcggaaat agctcacaat agattactta attctggact actacaatct
    19381 aaattttcca gcgcagagga tgcaactcgt gcgttatttg gtattcagtc gcagtatcaa
    19441 caatttggag agattagttt atttaatcgt gtacctaatt taaccaaaga aaacctgcaa
    19501 atggcttacg acgataaagg gataatcaaa atctgggggc aaagaatgac tgtccatatg
    19561 tatacgccgg atgattggtt ttatgttcat gatgtttatg cgaacaaaaa caattggtta
    19621 agaaagcacg cagactctct aggacgtgat ttggatgaga ttttagtaca aatggaagaa
    19681 ttactcctgc gcgaagataa agtgtctaaa gagtcctttg cggctttact aggtaatgaa
    19741 gcaaaagagc tgatgacatg gggcggggtt tttattcaag ggtcactcga tggcaagttg
    19801 ttttgtgtgc cagaaagtcc taaaacaaaa ttttatagtc atagaaacca aattgattca
    19861 gaaagagaag atgcttggat aactaacaag cgcagcaaga caggtcttga aacaatgatt
    19921 gatcgttatt ttagtgcatt tgggccagcg actatacaag atttcaagca ttggagtggt
    19981 ttgcgaaata gtgattatat agaaacgtta gaaaagttac ttgaaaacta tatatgctat
    20041 atcggtgaag atggcaagaa ctattatagc aaagcaaaaa cgcaggaaaa tgtggagatg
    20101 gggtcgccgc ttctattagg gaagtttgat ccgcttttcg taagttacgc gaaaaagaat
    20161 tggcttgcga gcgaaaaaga aacgagtcta atctggcgca ccgctgggca aattgaagct
    20221 gtcttaataa taaatgctca gttttttgga acgtggagat ataaaatatc gggggataaa
    20281 atagtttttc aattctatct tagtaaaaaa ctaactaaaa aaggacaaaa attagtagaa
    20341 aaagaagcga taaaactagc tgaattcctc cttaaaaact accaaggcag catttttgaa
    20401 caaatttaaa agaacccccg tcagaacggg ggttcttttc ttataaaaat ggcatttctg
    20461 gaaaataatc caaaggtaat ttgatactgg tagtgatatt tgctttaccc atgttgcata
    20521 cttgaaactc agcctgcagt gatagaagga acatcgcatc ttcagttgtc attttatctg
    20581 attcagtaag taaagttatc atattttgca tcgctttttt tgccgctttc tcaatagtga
    20641 gatctgatgc taagcaaatt aaatggttgt catgaatgat tgtgggtgtg ggagctgttc
    20701 gatttttaag gatttgaagt cgtaaagtga tttctgctgg cgcctctgca ctcgtggtag
    20761 tagttttccc gaagccagct gtagctcgaa cattgccgat gtaaagcgat gcaccctgtt
    20821 tttcaactgg taaaaagatc gttgcacctt ctgtaatctc ggatgagtcg agtaggccgt
    20881 cgttgttagc tggtgatttg gaggtaagta agccttctgt tcgtagcaat ccgatagttt
    20941 tagttatcgg aatatgaatt tcatctgaat acataattcg attctctctg actttgtagc
    21001 aacgagtata gttgcttgtt aataaatcat ctgttatacc aacatttggt ccgtttagta
    21061 aaaatacctc cgtccctagg agttcaattt tttcaatcgt taccgctaat aaatctccac
    21121 ttctagcttc ttcgatatag attggtccag tagttggtga aaattgtttc caatctaggt
    21181 ccccgtattg aagctgtttg ttttgaattt ggccattgaa gtagtctttt gtttttatct
    21241 ttactacaga gccatctttc actgtaattg caggttccgc cgatttatcc atcttaaaaa
    21301 ccgcgcgttc tgaagttaca aagtttttca tctcttccct tctctctata ttctattagt
    21361 agtgacgggt gaattatagc aaaatgagaa gtaggaagta aatggatatt ctgtgaacaa
    21421 aaccgagttg caaacagtag aaagcaattc tttattccat tttttcaacg gttacattgg
    21481 gaagagtttg tataaagtga aatagttcgt attcatcgtt cttattcttt gtttttacaa
    21541 caatattcac gcgaataaaa agactttctc cgataagttc tttttcactt gagtacgaaa
    21601 cgatttgttg tttgttttgt tggatcttgt ccgtgacctt cactagattt tcttgtttgt
    21661 cggttgaata gataattgca gttgtatgaa aggcaaatga tttgaaaacg atactcaaga
    21721 attctaatcc gattaaggta agtaaagtag cggcaattcc aacccagtac atacctgcac
    21781 caatagcaag gccaatgcca gctgtggccc aaagtccggc tgctgttgtt agaccgcgaa
    21841 caaatttctt ttgaataata atcgtacccg cgccaataaa gccaatcccg cttaccactt
    21901 gagcagcgac acgacttggg tcaaacgata cattttgcat ggtggcaatt tcggaaaaac
    21961 catattgaga aacaatcata attaatgcgc taccgagcga aacaagaaaa tgtgtccgga
    22021 atccagcttc tttcgctctg atttctcggt caagtccaat aattgctcca aggagacccg
    22081 caacaacaag ccgtaaaata aaatctgcta acatagttat cacatcctta acgttaatat
    22141 attccctttg gcattaaacc aaaacaatca aaaaggaaat tttgcgccgg atggatgttt
    22201 atactataat aaacaatgaa tggtcaaaaa gtgaggtgtt aagcgtggca gaaagttttg
    22261 tgagattaga gcacgttttt tataaatatg aggatacgga aaaatatgca gtgaaagatg
    22321 tatctatttc tgctcaaaaa ggggaatggg ttgcacttgt tggtcataat ggttcaggta
    22381 aatctaccat tgcgaaatta ctcaacggat tgctttttcc agaagatggt ttaatcaaaa
    22441 tcggacactt tgttttgtct gaaaaaaata tatgggacat tagacgacaa gtaggaatgg
    22501 tttttcaaaa tccagataac caatttgttg gagctacagt gcaagacgat gtcgcgtttg
    22561 gacttgagaa tcacggggtt ccgcacgata caatggtgga acgcgtcgag tcagctttga
    22621 atgaggttgg gatgcaaagt tatgcactac atgaaccagc tagactttct ggtgggcaaa
    22681 aacaacgggt agcaattgct ggcgttttgg cgctgcaacc agatgtcatt attttggacg
    22741 aagcgacttc tatgcttgat ccaagagggc gcgccgaagt aatggaaact attcggatta
    22801 tgcgtgaaca agaagacatt accgttattt cgattacaca tgatttggat gaagttcttt
    22861 ttgcggatcg agtaattgtt atgaataacg gagaagtcca cagtgaaggc acaccgcaag
    22921 aaattttcga gcaagcagat gcaatgcgcg aaattggctt aggtgttcca tttattattg
    22981 aattacaaga aaaattagtt gcaggtggct ttgaaactgg aagcaccgtg ctatcggaag
    23041 gagcattact agatcaatta tggaaattaa actcgaacaa ctaggttatt gttatcaaaa
    23101 aaatagccct tttgaaaagc gagcattact tgatgtgaat gtttcttttg attctggtag
    23161 ctattctgca attattggtc atactggctc agggaaatca actttgctac aacacttaaa
    23221 cgctctttta atgccaacag aaggtaaaat cacagttggt gatcgagaaa tcgttgctgg
    23281 cgtaaagcaa aagaaactac gtgatttacg taagaaagtc gggattgtgt tccaatttcc
    23341 agaagcacaa ctttttgaag aaacggtcga aaaggatatt tgttttggac cgatgaactt
    23401 tggagtttcc gaggaagatg caaaactacg cgctaaaaaa gtgatttatg aagtgggact
    23461 gaccgaggaa attttgtcac gttcgccgtt tgaactttct ggtgggcaaa tgcgccgggt
    23521 tgcgattgca ggtgttttgg cgatggaccc agaagtactt gtgctagatg agccaacagc
    23581 gggactagat cctcatggcc gcgaggaaat catggaaatg ttctacaatc ttcataaaga
    23641 aaaagggctt acgacagtac ttgtaacaca cagtatggaa gatgctgctc gttatgcgga
    23701 aaagattgtc ttgatgaaag ctgggacggt tcttcaaatc ggtacgccac gtgaagtttt
    23761 cgcgaagcca gacgaactgg ttgatcttgg gttatctgta ccggatgtgg tgagattcca
    23821 aggacttttt gagcgcaaat ttgatgtgaa attaacaaaa acttgtttaa ccattgatga
    23881 attaacgacc gaaatggcgc cttatttagc gaagggcggg gcataattat gatggataaa
    23941 atgattctcg gacgttatat tccgggaaac tcttggttgc atcgaattga cccacgtgcg
    24001 aaaatcactg ctgttatggc gtttatcgcg attgtctttt tagcgaacaa ttggctgacc
    24061 tatgcgctta tgtttgcgta tgttttgtat ttagtcctaa cttcgaaagt gccattttta
    24121 ttttttatta aagggttaca accgattttc tggcttattt taattacgct attacttcaa
    24181 gtctttttta caaaaggcgg gacagtttta gtcgatttag gacttttaca aataacgaca
    24241 ctcggactga caaatggagc gatgatgttt tgtcgctttg ttctcattat ttttatgaca
    24301 acacttttaa cattaacgac aagcccgatt gaactaacag acggactgga gaaaatttta
    24361 gcgccgtttc gtttagtaca tttaccagta catgaacttg ctttgatgct gagtatttct
    24421 ttacgattta ttccaacatt gatggatgaa acggagaaaa tattaaaagc gcaaaaagct
    24481 cgtggcgttg aatttacgag tggaaaatgg agtgatcgga ttaaagcgat tattccgttg
    24541 cttgtgccac tttttattag tgcgtttaaa cgtgcggaag atttagcgat tgcaatggaa
    24601 gcacgcggtt atcgtggtgg taaagggaga acgagattcc gtttactacg ctggcgattt
    24661 gcagatacgt tgctactgat ttcgttagta gtgttaagtg gattattatt ttggttgcgg
    24721 agttgaaata aatgacgaga tataaagcga taatttctta tgatggtagc gggttttatg
    24781 gctatcaggt gcagccgaat acacggacgg tccaagcgga aattgaaaaa gcactgacaa
    24841 aaatgcataa aggcaagact gtgcggatta cagcatcagg aagaacagat actggtgttc
    24901 atgcgaaagg tcaggttatt catttcgatt cggaacttga tatcactgcc gaaaaatttc
    24961 aaaaagcttt gcaagtcatg actccgttcg atattagctt tttaacagtg gaagaagtac
    25021 cagacgattt ccacgctaga tttggcacag ttggaaaaga atatcgttat gtggtaaagc
    25081 ggacgaaaat ttttgatcct tttagtcgga attttgcgct acattatcca tatgaactgg
    25141 acatttcaaa aatgaagttg gcgagtaaac gcctgattgg cgagcatgat tttactagct
    25201 tctgttcggc gagaacggag cgcgattcta aagtccgaac actttatagt attgattttt
    25261 atgaagagga cgacgagacg ttagtgattg cttttcaagg gaatggcttt ttgtataata
    25321 tggtgcgaat tttgacggga actttgctcg atgcagggca aggtcgaatc tctccggatg
    25381 atattagtga ggctttatta gcacgtgacc ggcaaaaatt aattagtaaa actgcgccgc
    25441 cacaagggtt atatttatgg cgagtggact atgaataaaa attggatgtt tttttgcaga
    25501 acgcattgac tttttgctcc aaaaactgta ttatggacta tggtattgtt tgccccacaa
    25561 taagccccgg aaggttgttg tgtttaaaca ataaaaatat agaatagcat ttcgggaatt
    25621 aggaacagtt ttcgggagct aatttgtttc aatttattta ggagggtaat tcatgcgtac
    25681 aacttatatg gcgaaacccg gcgaagtaga acgtaaatgg tacgttatcg acgctactgg
    25741 tgtttcttta ggacgtttat ccagtgaagt tgcttcaatt cttcgcggaa aaaacaaacc
    25801 acaatttact ccacatatcg acactggaga ctttgtaatc atcatcaacg ctggtaagat
    25861 tggtcttact ggtaaaaaag ctactgacaa aatttactac cgtcactctc aatatccagg
    25921 cggtttgaaa tctcgtactg caggcgaaat gcgtacaaac aatcctgaga aattattaga
    25981 actatctatc aaaggtatgc ttccaaaaaa ttctcttgga cgtcaattat tcaaaaaatt
    26041 acacgtatat ggtggagctg agcacgaaca cgcagctcaa caaccagaag tatacgaatt
    26101 acgcggttaa ttaataaagg aggaatacta agtggctcaa gtacaatatt acggaactgg
    26161 tcgtcgtaaa agctctgtag ctcgcgtacg tttagtacca ggcgacggca aaatcgttat
    26221 taacaataga gactgggaag attacatccc attcgcagct cttcgtgaag ttatcaaaca
    26281 acctttagta gctacagaaa ctttaggtaa ctatgatgta ctagtaaacg ttcacggtgg
    26341 tggttacact ggtcaagccg gtgctatccg tcatggtgta gctcgtgcac tattacaagt
    26401 ggctcctgag taccgcccag cacttaaatc tgctggccta cttactcgtg acccacgtat
    26461 gaaagaacgt aaaaaatacg gacttaaagg cgcgcgtcgt gcacctcagt tctcaaaacg
    26521 ttaatagaaa cattgatata tcaatgttta cagagctttt ttggttcaag ttggttcaaa
    26581 tcaacttgaa ccttataaag cacttaacag atttaaagca tcggcatctt gctggtgctt
    26641 tttttctggc attaattcca gataataatt ctgtgtggtt tgaatattaa tgtgacctaa
    26701 tcgctttgat acataagcaa tatctatatc ttgagcaaat aaaaacgatg catgagtgtc
    26761 tcttaaaccg tgaaacgttg tcttcttaat atctaatttc ttcaataact ccgctaattg
    26821 ttccgactgt ttaaaaccgc caaagctgaa aatataacca tcctctttaa caggaatttt
    26881 acgaatgagt tcatatactt ctttgttaat agaaacatca cgttttgcat ttagtgtctt
    26941 taacgaagtg tcatcagaag taggactgat tgaatgccta acttttattc cgtattcata
    27001 aagactctct gggcgtattg ctagtagttc cccacgttgc atacctgttt ctaatgcaag
    27061 taatacaagt aagttaaatt cgtcttctgg atgctgtaaa acgtagttac gaagctttct
    27121 aaaatcggtg atagataatg ctttattacg tttaggtggc ttttcccctc gggttttcac
    27181 taatcgtgca aaatcatttg caatatatcc acgagcatat gcatcacgta aagatgtttt
    27241 tattttaaga agaacctcat gtgttgtttt tcgagaatgt gtcttggcat actcatcaac
    27301 cttcttttga acaacaatat catttaaatc ttttaattgg atgtcttgaa ataaatttcg
    27361 aataatgcct aaggtacgaa cgtaattttg aaatgttgtt tctttaacat catttacttt
    27421 tacaagataa atccaattct cgaagaagtc cgcaaatgtt gtcgttctgt gagcaagttc
    27481 tttaccttct cctttcgcta attccatttc taacgcccaa agattttcct ctttctttgt
    27541 cgaaaaggtc tgagaaatct ttttatgttg accgtgctta tataatgaaa cttgtgccct
    27601 gtatgatttt cctcttttaa ctatactagc catactatca atccctttca taaataaagt
    27661 tgatagatgc tagttgaata caactatatt gtatttctaa accagcatct tatcaactgt
    27721 tgatatttta aacggaatgt ttttcgataa agtgtactag agatttcatt gtgtatcgtt
    27781 cgtgcctacc aatcatgaaa cgttccagct cttcatgctg tcggatatat ttatcaaaag
    27841 acttagggtc tatacctaaa aaaatctgac gcttgttcac gagttaaaag gtaaggatag
    27901 tcatttgtgt ttttatcgat gctcataaag caccatctcc atttcattat ttttattcat
    27961 attcgtttaa tgctttcaat gcactttcag cactatcttt aatatttgct aagatagctt
    28021 cgggtgtata gatatgtttt tgataatctg aatcactagt ccttttgtta attgtatttt
    28081 catcctttag aacagagtca gccattttaa taatgtggtt tatgtttgat cttacttgtg
    28141 gcttattcat tgtcatatca tccttcccaa ggcttaccct ctaattggta aagtgccttg
    28201 tacttattta accaagatat atggtcatca ttgggttcaa aactattgta gtactggtca
    28261 cccaaccact ccagtaactc tttataagtt ccatctcccc agattccatc tactttccaa
    28321 agcaaaggaa ataaaccact gtttttttgg atataattta ttgtttgatt taacatgttg
    28381 tttcttggtg agggagaatc gaatttaaaa tcattattat ttaacagatc tagcattttt
    28441 ttagtttcta tagtcggacg gtttattttc ccttttttac tttcttttgt atagtaaaat
    28501 ccgtaccgat ctaaaataga actaacaata atgtttttca attcttcatc tgacttacaa
    28561 ttctcgattg cgtcagttag ttggtgtgca tagcgccctt tgtattcggc ttcgtaacgt
    28621 acccagtcat ctagtttttc tgcttcatgt cttaagtgcg tcatcgttta ctacttccta
    28681 actgctcggc ttttttgtca taaattctaa gcatagcatc gatattttcg ccacgtttac
    28741 cgatatagat cgtttgtgca ttaaaattgc tactaacatc cctaatcttg gattgattct
    28801 ttttaaattt cttctcatca ttaatcatgg ttgtatctca cctcagttct tccagcctct
    28861 aaagagcgat atatctttgc gatatctacc ccttcatttt taaaatcaat gaccatatcg
    28921 atacgactaa gtctatatga ataatctttt gaatggatta actgaaaaaa tgtgtgtaga
    28981 tgaatcggtt tgttaaaata ttcttcatat cttttgcggt attcactcca cgcataagcc
    29041 gaaaagtata ttgaaacacc catgtttaca taaaacggat gataggcgat gcgaaaatag
    29101 aagggagcat ctaaaaacgt ataacctttt gtataatttt ttagaattcc accatctact
    29161 tcttctacca gcccgaataa taactctaat ccagactttc tgctttccac ttttcccaat
    29221 catcaaagtc aaatgccaga gatcttggct gaagtattaa tgtgaattga tcaatatcgg
    29281 ctgtcacagt cataactttt gtcatccttt ctaaaaacat tgcgtaatgt tttatagcgt
    29341 ttaatataga gataaatgct gttaaaccaa ctattctggc ttaataaatg agcttttttc
    29401 actgttttgg aactccgctt attaggaaac agcggagttc tgaaacttgg agctgtacgg
    29461 gctatgccct tatgccagcc ctgtcggcaa aagccgacag ggacgctacg ctctggcagt
    29521 tagtagcttc agaacttaga actagaagct ttactattgg agctgcgtgc gcttccatag
    29581 agaaacaggg tctttttcgc cgttattgta actatcaatc aaatctataa tattttcggt
    29641 tgtgtaagct gtgttcttgc cattgatcca gtttccaatt ttccttaatt ggtcattctt
    29701 cgggtctgca aaaaacaatt cgtaatgaat caatttattt atcatttgga gcaataatcc
    29761 aatcaatcca taagtttttc cgcttctagt agcaccaaca agaagtgtgt gttttaaatc
    29821 gaatgataga cggttatcga ttctcaattg aaatttgttt gttgtttcat ttgaccaatt
    29881 taagtattct tccaatgaat cgaagactgc ttgaatttgt gaatttactg aatagaaatt
    29941 ataaatccac caatcaccat catccgatag atagaaatct tccactttaa aaccttttag
    30001 tgaaggagta aatgttgctt ttgcaagacg gtcatgaaat tccaatgaat ctcgtacaat
    30061 taattttcca gaagtcattt ctttattatc aaattctact ttgatagttg gcatttgtac
    30121 tacacgttcg gtcacatgtc tttcatctcg ataatttgcg tctatcattt ctttccttaa
    30181 atttaagatc agaaaataac gcttcagtgc tcttttgcct tcccagattt tatttcttaa
    30241 agaccagaac aagattgtag gaaatattat cattgtcaca gcaacaaaaa atatattatt
    30301 tactttttga agttctattc taaaatttat gcccacagcc ttaaacactt ggttcattga
    30361 ctcgttttga tatgcaagca atatccagat aactattaac atcaatgtag aaccaaaaac
    30421 gtagaaccca tttaatttac tttgtgtgac tctcaattca catagctcct ttttaggaga
    30481 aggacaacgt caatttcttt gacgttgcct aaatctctac ttaataacat ctaaatcttt
    30541 aaatacaatc gatacttgtt caccaaagtc gttttgtaac caacagcctt ttctagtttc
    30601 cctaaatcca ttttgactct tgtgcctttt ggtacttcaa aagccccatt caaaatttta
    30661 atatcgaatt gcttgaattt gagattgggt atttttttgc cagcttttgt tactccataa
    30721 tcctcttcgt ctctggtaca cataagtgtt acattctttc cgatcacatt gtcagttatc
    30781 ttgccgtcag cgtattcgta cgcatccctt agttcaacca caacataact ttttgttttc
    30841 tcgtcgaaca atctttcggc atccaccact gttttcacaa ataaatactg atttggcaat
    30901 ctagccatct ttacatcaac cctttctaac ctgcgcagat tatcgttatt gttacgcgta
    30961 attttattat aatatgaagt agatagtatg ttaatggtgg aagaataagg ttattaaaga
    31021 ccggtttatc gttatatctt ttttggttat gttataataa attacaggag gggagaaaaa
    31081 tatgagtaca tatgatgaaa tagatgaaaa aattcaaaaa agatacaaac tgaaggattt
    31141 ttaccaagga gagaattaat gcattggata gatctgaagt ttggttacag atttgatgaa
    31201 aaaaaagata atttgatttc ggaatctaca tggagaaagt atttagatga tttctttaat
    31261 tacaagaaca ataaagaagg aactttaacc aaatatacag atatgcttag gggcgggaat
    31321 agaaataggg aatatcatat cgattttata aaggaaatta ttgaattcaa aaaagacgat
    31381 ttaatagaac atcttaatag taataaaaaa acaataaaga atcctagtct ggaatatttc
    31441 gccgaagaaa tgaacttaaa atttgatacc caagataaat ttataaaggg aacctttatt
    31501 aaacgcggaa gagtaatcaa gactcaatat aaat
//
LOCUS       DASDYO010000015        30845 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.015, whole genome shotgun sequence.
ACCESSION   DASDYO010000015 DASDYO010000000
VERSION     DASDYO010000015.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 30845)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30845)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30845
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.015"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            122..646
                     /locus_tag="U0290_000637"
     CDS             122..646
                     /locus_tag="U0290_000637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2179 domain-containing protein"
                     /protein_id="HEM2300687.1"
                     /translation="MDNGIFIVATIFIVNILYVTIYTVRLLLTMKGYRYLAALSSVFE
                     MIIYVVALSLVLDNLNNIANVLAYAIGFGVGIIVGMKIEERIALGYITVNVITKEYNL
                     DLPNQIRDLGYGVTSWLASGRDGERMMLEILTQRKNERKLYKHIIEIDNGAFIVSSEP
                     KQIHGGFWVKQVRK"
     gene            852..1340
                     /gene="purE"
                     /locus_tag="U0290_000638"
     CDS             852..1340
                     /gene="purE"
                     /locus_tag="U0290_000638"
                     /EC_number="4.1.1.21"
                     /EC_number="5.4.99.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide mutase"
                     /protein_id="HEM2300688.1"
                     /translation="MPAVIGVIMGSTSDWDTMKKACDVLDELEIAYEKKVVSAHRTPD
                     LMFQYAEQARERGLKIIIAGAGGAAHLPGMIAAKTTLPVIGVPIKSKALNGMDSLLSI
                     VQMPGGVPVATVAIGESGAVNAGLLAAQILSITDDAITNRLQKRRATLEETVLESSDY
                     LG"
     gene            1333..2457
                     /gene="purK"
                     /locus_tag="U0290_000639"
     CDS             1333..2457
                     /gene="purK"
                     /locus_tag="U0290_000639"
                     /EC_number="6.3.4.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-(carboxyamino)imidazole ribonucleotide
                     synthase"
                     /protein_id="HEM2300689.1"
                     /translation="MDKKFLLTNSTIGIIGGGQLGRMLALAAKAMGYRIIVLDPTADC
                     PAAQVSDEQIIADYDDKVALRELSEKADVVTYEFENIDYDALKMTQNLVSVPQGSELL
                     SITQDRILEKAYLESANINIAPYAVIVEQDEIENEIKSIGYPAVLKTAQGGYDGKGQV
                     VIHDARDIETAARLLRYGSCVLEAWIPFEKEISVVVARNLEGQIETFPVAENVHVNNI
                     LHTTTAPADVADDVHEEAEEIARKLADVLQLCGVLAVEMFVTKSGAIYVNELAPRPHN
                     SGHFTIEACSISQFTQHIRAIVGLPLVKPELLKPALMINILGQHVDAVNKQMVNYPHW
                     FVHYYGKKEAKINRKMGHVTVLADEPKAVIQDLEETQIWK"
     gene            2476..3768
                     /gene="purB"
                     /locus_tag="U0290_000640"
     CDS             2476..3768
                     /gene="purB"
                     /locus_tag="U0290_000640"
                     /EC_number="4.3.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate lyase"
                     /protein_id="HEM2300690.1"
                     /translation="MLERYTRKEMGNIWTEQNRYQAWLEVEILACEAWAELGDIPKED
                     VAKIRANAKFDVDRIHEIELETRHDVVAFTRSVSESLGAERKWVHYGLTSTDVVDTAN
                     SYLLKQANEILRKDLENFIAIIGEKAKEHKYTVTMGRTHGVHAEPTTFGLKLALWYEE
                     MKRNLERFNFAADGVEFGKISGAVGTYANIDPFVEAYVCEKLGTTPAPISTQTLQRDR
                     HAEYLATLALIATSVEKFAVEVRALQKSEVREVEEFFAKGQKGSSAMPHKRNPIGSEN
                     VTGLARVIRGHMVTAYENVPLWHERDISHSSAERIILPDSTILLDYILNRFGNIVKNL
                     TVFPENMKRNMDRTLGLIYSQRVLLALIDKGLAREAAYDVVQPRAMEAWEKQVPFREL
                     VEQDATIIENLSAEEIADCFDYNYHLKNVDLIFDRLGL"
     gene            3849..4562
                     /locus_tag="U0290_000641"
     CDS             3849..4562
                     /locus_tag="U0290_000641"
                     /EC_number="6.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylaminoimidazolesuccinocarboxamide
                     synthase"
                     /protein_id="HEM2300691.1"
                     /translation="MTNELVYEGKAKRLFKTEEAGVLRVAYKDDATALNGVRKESFAG
                     KGELNNQITSLIFSHLAGAGIESHFIRAISETEQLVKEVSIIPLEVVVRNVMAGSLAK
                     RLGKEEGELIPNAIVEFYYKDDALDDPFINDDHVLYLELATTSEMDIIRQAARSINKV
                     LQELFNQMNITLIDFKLEFGRDATGNILLADEISPDTCRLWDKETNQKLDKDVFRRNI
                     GNLTDVYTEVLNRLKQVQN"
     gene            4574..4819
                     /gene="purS"
                     /locus_tag="U0290_000642"
     CDS             4574..4819
                     /gene="purS"
                     /locus_tag="U0290_000642"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurS"
                     /protein_id="HEM2300692.1"
                     /translation="MYNVKVYVTLKKSVLDPQGVAVKDAAKSMGYEEVEDVRIGKFME
                     LKVVKSDRDIHEVLNEMCDKLLTNPVMEDYRYEIEEA"
     gene            4823..5506
                     /gene="purQ"
                     /locus_tag="U0290_000643"
     CDS             4823..5506
                     /gene="purQ"
                     /locus_tag="U0290_000643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurQ"
                     /protein_id="HEM2300693.1"
                     /translation="MKFAVIQFPGSNCDLDMLHAIRDSLGEEAEYVWHAETSLAGFDA
                     VLLPGGFSYGDYLRTGAIAKFSSIMPEVLRFAEMGKPVLGVCNGFQILTEIGLLPGAL
                     IRNNNLHFICKTVPLRVANASTMFTGLYKEGEIIQVPVAHGEGNYYCDDETLLKLKDN
                     NQIVFTYDSVNPNGSRADIAGIVNERGNVLGMMPHPERAVEEIIGGTDGLRLFESVVK
                     AWKEEQVNA"
     gene            5499..7718
                     /gene="purL"
                     /locus_tag="U0290_000644"
     CDS             5499..7718
                     /gene="purL"
                     /locus_tag="U0290_000644"
                     /EC_number="6.3.5.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine synthase
                     subunit PurL"
                     /protein_id="HEM2300694.1"
                     /translation="MPNMEPTTKEIKEQKIYQEMGLTDSEYELVCSILGREPNYTETG
                     LFSVMWSEHCSYKNSKPVLRKFPTEGKQVLQGPGEGAGIVDIGDGLGVAFKVESHNHP
                     SYVEPYQGAATGVGGIIRDVFSMGARPIAMLNSLRFGELDTPHAKYLVSEVVAGIAGY
                     GNSIGIPTVGGEIQFDPCYTKNPLVNAMCVGLIEAKDIQKGQAKGIGNPVMYVGAKTG
                     RDGIHGATFASVEFSEEGEQQRSAVQVGDPFMEKLLLEACLDVIRDHSDILVGIQDMG
                     AAGLVSSSSEMASKAGAGLELIMDDVPQRELNMTPYEMLLSESQERMLLCVKKGHVEE
                     IQALFERYGLEAVVIGQVTDDKMYKIIHHGEVVANVPVDALAEDAPVYHKPSKEPARY
                     QAFQEEESFVPVMEDVVGVWKELLAQPTIASKRHIYEQYDYQVRTDTAVVPGSDAAIV
                     RVRGTEKAIAMTTDCNSRYLYLDPEVGGAIAVAEAARNIVCSGGKPLAITDGLNFGNP
                     EKPEIFWEIEKAADGISAACLELDTPVISGNVSLYNETDGTGIYPTPVIGMVGLVEDL
                     AHITTQDFKNSGDVIFLIGETKAEYSGSELQKLQQGKISGRAPELDLTTEKKYQQLLL
                     TAIQEGLVASSHDLAEGGFGVALAEATFKAGLGADVEVPFELNQLFSESQSRFLVSVK
                     PENEAAFAQLMELEKVYRLGVVTEDDTIRVKHKENQVTAKTTELRSIWEGAIPCLLK"
     gene            7703..9130
                     /gene="purF"
                     /locus_tag="U0290_000645"
     CDS             7703..9130
                     /gene="purF"
                     /locus_tag="U0290_000645"
                     /EC_number="2.4.2.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidophosphoribosyltransferase"
                     /protein_id="HEM2300695.1"
                     /translation="MLAEVKGLNEECGIFGIWDHPNAAEITYYGLHSLQHRGQEGAGI
                     VSTDGETLKGHRNLGLLADVFKHGELDDLKGKAAIGHVRYATAGQKNLGNVQPFLFHF
                     HSSSLALAHNGNLVNAKSLRRELEEEGAIFQTSSDTEVLAHLIKRSHTGDFVEDLKVA
                     LNKVKGGFAYMLLTEDTMYAALDPNGFRPLSIGRIGDSYVVASETCAFETVGAEFVRD
                     VEPGELIIINDDGLRIEKFTENVTHSICSMEYIYFARPDSNIAGINVHSARKRSGKRL
                     AKEAFIDADVVTGVPDSSISAAIGYAEEAGLPYELGLIKNRYVARTFIQPSQELREQG
                     VRMKLSAVRGVVEGKRVVMIDDSIVRGTTSKRIVQLLREAGAAEVHVRIASPPLAYPC
                     FYGIDIQTRNELIASNYSVDEICRIIGADSLEYLSEEGLVDSIGRPYPNEPYGGLCMA
                     YFNGDYPTPLYDYEAEYLASLEAEK"
     gene            9149..10198
                     /locus_tag="U0290_000646"
     CDS             9149..10198
                     /locus_tag="U0290_000646"
                     /EC_number="6.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylformylglycinamidine cyclo-ligase"
                     /protein_id="HEM2300696.1"
                     /translation="MAENAYSKAGVDVEAGYQVVERIKKHVARTERLGAMGALGSFGG
                     MFDLSSLHLKEPVLVSGTDGVGTKLLLAIEADKHDTIGIDCVAMCVNDILAQGAEPLF
                     FLDYIATGKTDPVKMEQIVKGVADGCEQAGAALIGGETAEMPDMYGAEDYDLAGFTVG
                     AVEKQKLITEGAVKEGDTLIGIPSSGIHSNGYSLVRKIFFKDNELTLDAEISELDVPL
                     VEELLKPTRIYVKPVLEVLKEVDVHGITHVTGGGFVENLPRMLTNDLAVKVELGSWPV
                     LPIFDVMKKYGQLSELEMYEIFNMGIGMVLAVAKADVERTLEVLVQNGEAAYVIGEVT
                     TRENDAVIFTGGTKG"
     gene            10195..10761
                     /gene="purN"
                     /locus_tag="U0290_000647"
     CDS             10195..10761
                     /gene="purN"
                     /locus_tag="U0290_000647"
                     /EC_number="2.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylglycinamide formyltransferase"
                     /protein_id="HEM2300697.1"
                     /translation="MNIAIFASGNGSNFQALVDDAFIKPHVKLLVCDKPNAYVLERAN
                     THQIPVFLFEAKNYPDKEAFETEILLELRGLEIDLLVLAGYMRLIGPTLLAEFPEQIV
                     NLHPSLLPEFKGKDAIGQAIQANVSETGVTAHFVDAGMDTGPIIDQVKVPIEHAETVD
                     TLAGKIHQVEHIFYPKVIRGLIQNGGND"
     gene            10767..12296
                     /gene="purH"
                     /locus_tag="U0290_000648"
     CDS             10767..12296
                     /gene="purH"
                     /locus_tag="U0290_000648"
                     /EC_number="2.1.2.3"
                     /EC_number="3.5.4.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional
                     phosphoribosylaminoimidazolecarboxamide
                     formyltransferase/IMP cyclohydrolase"
                     /protein_id="HEM2300698.1"
                     /translation="MKRALISVSDKNGIVPFAEKLVELGVEIISTGGTKAAFEQAGVP
                     VTGIEEVTEFPEMLDGRVKTLHPAIHGGLLARRDTAEHMEAIAAHDIKPIDLVVVNLY
                     PFQETIQKSGVTLEEAIENIDIGGPSMLRSAAKNYAAVTVVVDTADYDTVLTELEEHG
                     ATTFETRQRLAAKVFRHTAAYDALIAEYLTNITGETFPEKVTLTYNRKQVLRYGENPH
                     QDAAFYTEPGTVENSISSAKQLHGKELSYNNIRDADAALKIASEFTEPVAVAVKHMNP
                     CGVGVGENIEEAYLKAYEADETSIFGGIVALNKEVDAKTAEHMSKIFLEIIIAPSFSE
                     EAFAILAKKKNIRLLTVPFAGSVKGFEKTSVNGGLLIQASDSVIEDTASYEVVTEKQP
                     TEAEMKALIAQWKIVKHVKSNAIVVGSDKQTLGIGAGQMNRIGSALIALKQAGEKAKG
                     AVLASDAFFPMDDTVEAAAKAGITAIIQPGGSIKDKESIEMANKYGISMVLTHVRHFK
                     H"
     gene            12321..13583
                     /gene="purD"
                     /locus_tag="U0290_000649"
     CDS             12321..13583
                     /gene="purD"
                     /locus_tag="U0290_000649"
                     /EC_number="6.3.4.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosylamine--glycine ligase"
                     /protein_id="HEM2300699.1"
                     /translation="MNLLVVGSGGREHAISKKLLESNNVENVYCAPGNDGMRLDNIQL
                     VAISETDKAGLIDFAKKAEIAFVIVGPEVPLLEGVVDALEEAGIKAFGPKANAALIEG
                     SKDFAKQFMEKYAIPTAASKTFTDYAEAKAYLDERGVPIVIKADGLAAGKGVTVALEM
                     EEAVLALKDMMLEEKFGDASLKVVIEDFLAGEEFSLMAFVNGEEVYPMAIAQDHKRAY
                     EGDKGPNTGGMGAYSPVPHISETVVDEAVEKILLPAAKGMVKEGRYFRGILYAGLILT
                     AEGPKVIEFNARFGDPETQVVLPRLESDFAALIDALLHNEKPDVRFKKSGITLGVVLA
                     SAGYPEHYEKGNKLTGLNDVAEDVAIYHAGTKQDENDDFISDGGRVLLLAKEAETMTD
                     ARTLLYPEMQKLDNPNFFYRIDIGTKAE"
     gene            13722..14018
                     /locus_tag="U0290_000650"
     CDS             13722..14018
                     /locus_tag="U0290_000650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465288.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM2300700.1"
                     /translation="MQIEKLRGQGLDEFFQGILTLENLEECYAFFDDVCTVNEIQSMA
                     QRFQVAKMLHDGKTYNVIESETGASTATISRVKRSLHYGNDMYDVVFSRMTKPE"
     gene            14035..14289
                     /locus_tag="U0290_000651"
     CDS             14035..14289
                     /locus_tag="U0290_000651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300701.1"
                     /translation="MKKFNSKTYQIVIISILALAVIYFVINMIATGTGLDFSLLWHWV
                     FIICFIFTTLANVREKRAIGTAIGLSGILICVTSIVLMAI"
     gene            complement(14332..15687)
                     /locus_tag="U0290_000652"
     CDS             complement(14332..15687)
                     /locus_tag="U0290_000652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sodium-dependent transporter"
                     /protein_id="HEM2300702.1"
                     /translation="MQENREEWGSKVGFILASAGSAIGIGAIWKLPYVAATAGGGAFF
                     LLFLVLTLLVVMPLLIAEFVIGRGSGGDAVQAYKTLAPGTKWNLLGKLGVVGASILFS
                     FYSVVGGWIITYLIKTLAGGIAGENQASLLHDFQVTTANPWISVGATILFILLNVIVI
                     SRGVVSGIEKMSKFMMPALFILFIVLIIRSLTLPGAMEGVAFFLRPDFSHFTAQTVLI
                     TLGQAFFSLSVGISVMVTYSSYLNRSTSLPQSAISVSLMNVFVSLLAGLAIFPAAFSF
                     NITPDAGPGLLFVILPSIFNQMPFGMLFFIIFLILFLFAALTSSFSMLEATVAPLMNA
                     GVNRKKASLWMGLVIVLMAIPSALSFGVWSDVQIFGLSIFDAADYLVSNIVLPVGALF
                     IAIFVGYRLPRELLLKEFTTSSHFGKKVFILWLFLIKYIAPIAIIFVFLSATGLIDFL
                     F"
     gene            15894..16571
                     /locus_tag="U0290_000653"
     CDS             15894..16571
                     /locus_tag="U0290_000653"
                     /EC_number="2.5.1.n9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465285.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heptaprenylglyceryl phosphate synthase"
                     /protein_id="HEM2300703.1"
                     /translation="MKHLFKLDPAKNLPMNDLTKLVHSGTNGFIIGGTDNVQIEAVQK
                     LYELLGETDLPIFLEISNESMILPEADHFLIPVVLNTENSKWTHGLHQELIKEMGAFI
                     PWKRVTAEGYVILNKDAKVAHLTEAKTDLTDEDIVAYARLAENIFHLPIFYVEYSGMY
                     GDPEVVRKASAALSNTKFWYGGGIRSKEQAAEMVKYADTIIVGNIIYEDLEKALETAT
                     IFRKKTV"
     gene            16636..18831
                     /gene="pcrA"
                     /locus_tag="U0290_000654"
     CDS             16636..18831
                     /gene="pcrA"
                     /locus_tag="U0290_000654"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA helicase PcrA"
                     /protein_id="HEM2300704.1"
                     /translation="MNAKELVDGLNPEQRRAVESTEGPLLIMAGAGSGKTRVLTHRIA
                     YLVRERGVNPYNILAITFTNKAAREMKSRIGNLMGGEAESIWISTFHSMCVRILRRDI
                     DRIGYERNFTILDGSDQLSVIKGILKEKNVDPKKFEPRGILASISNAKNELITASEYI
                     KEASGFYDKMVGEVYEKYEKKLKKNQALDFDDLIMVTIQLFERVPDVLEYYQRKFQYI
                     HVDEYQDTNHAQYLLVKQLASRFKNLCVVGDSDQSIYGWRGADISNIMSFEKDYPNAK
                     TILLEENYRSTKRILEAANRVIENNGNRKPKNLWTSNAEGKKIFYHKALTEKEEAAYV
                     VMKIQEEVNNSNRPLSDFAILYRTNAQSRVMEEYFMKSNMAYTMVGGTKFYDRKEIKD
                     ILAYLRLISNNEDDISLTRIVNVPKRGVGPGTLDKLNNVATTYDLSLFEVLNRIELAG
                     ISPKISKDLVAFHDLIRGFTQMQDFLSVTELVEEILEKTGYRAMLKNERTIEAQTRLE
                     NIDEFLSVTQNFEKENDDKTLIAFLTDLALVADVDKLEEDNEEQNGAVTLMTLHSAKG
                     LEFPVVFLVGMEEGIFPHSRAIYEEDEMEEERRLAYVGITRAEEELFLTSAYSRMLYG
                     RPSSNQESRFIGEIPRDLLELGNENKLKADKPYAKPRMPQKTTTAYKSSGAETLGWTV
                     GDKASHKKWGVGTVVSVKGEGSGMELDIAFPSPTGVKRLLAEFAPIEKV"
     gene            18857..20872
                     /gene="ligA"
                     /locus_tag="U0290_000655"
     CDS             18857..20872
                     /gene="ligA"
                     /locus_tag="U0290_000655"
                     /EC_number="6.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent DNA ligase LigA"
                     /protein_id="HEM2300705.1"
                     /translation="MADKKRYEELINILDQYSYDYYVIDNPTVEDAEYDQKMQELLKI
                     EEAHPEWVTPESPSKRVGGEVLEGFKKVAHDTPMLSLANAFNQEDLADFDRRIRDKVG
                     DDIAYMCELKIDGLAVSLQYENGKYKQGATRGDGTIGEDITANLRTIRSIPMKLQKDY
                     SIEVRGEAFMPKRSFQKLNEIREEEGQMLFANPRNAAAGSLRQLDTKIAASRNLDIFL
                     YAVADFGEMGVETHSAGLDMLETLGLKVNKERRLCNSLEEVYAYIEEWTEKRAGLAYD
                     IDGIVLKLNNLEQQRQMGNTVKSPRWSIAYKFPAEEVPTKLLDIELNVGRTGVITPTA
                     VLEPVRVAGTTVSRASLHNEDLITEKDIRIGDTVLIKKAGDIIPEVIKSITEKRSGSE
                     EPFHMPKNCPACDSELVRLEEEVALRCINPKCPAQIKEGLIHFVSRNAMNIDGLGEKV
                     IIQLFSQHLIKDVADLFFLSKEKLLELERMGEKSVTNLLASIQASKQNSLEKLLFGLG
                     IRHVGAKAAKSLAIHFDTMDNLKVADKETLTSINDIGEKMADSIVTYFANEEVHDLLE
                     ELKRAGVNMTYTGPKLEDMSEEELVFAGKTVVLTGKLEKLTRNDAKALIESLGGNVSG
                     SVSKKTDVVVAGSDAGSKLAKAEELAIPIWSEEDLIEYLPDEGGLNE"
     gene            20869..21984
                     /locus_tag="U0290_000656"
     CDS             20869..21984
                     /locus_tag="U0290_000656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CamS family sex pheromone protein"
                     /protein_id="HEM2300706.1"
                     /translation="MKKIIIAALGLTLVLSGCAPKLDSNDKVVQKDDSKAETGIMTKN
                     QISSNYYKTVLPYKASKSRGLVVSNIYSRYDINELESGLMRVSQNKYSPDNYLFQEGQ
                     YLDKETLEKWLDRKSDKNPNGLNPASNGNGENRNPIYLAHILEQDYLKQTDKDTVALG
                     GISIALAMNSVDYYQKEKYGDTYEQPISNSELLAQGKEMSTTVLNRIRQTKGLENVPV
                     TIAIYKQGARDAVAPGNYIAYATANGDSLSNWKDIDEKNYVLPSTESAKDHKTDNDNF
                     LNFKKAIEDYYPNFTGVVGRGRYEDGQLAELNIDIPLQFYGEAEIIGFTQYVTDLVGQ
                     HIPKTADLQVNISTSDGPAALITRKANEDAATAHIYD"
     gene            22109..22402
                     /gene="gatC"
                     /locus_tag="U0290_000657"
     CDS             22109..22402
                     /gene="gatC"
                     /locus_tag="U0290_000657"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatC"
                     /protein_id="HEM2300707.1"
                     /translation="MSNISKETVEKVANLAKLEVSETEATAFAGQLGKIIELVEQLNT
                     LDTTNVEPTSHAIDVSNVLREDVATKGLDRKEVLKNAPDEQDGMFKVPTIMEQ"
     gene            22426..23877
                     /gene="gatA"
                     /locus_tag="U0290_000658"
     CDS             22426..23877
                     /gene="gatA"
                     /locus_tag="U0290_000658"
                     /EC_number="6.3.5.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatA"
                     /protein_id="HEM2300708.1"
                     /translation="MGLFDFSVKELHDKLVKKEISPFDLVSESFNRIESVEDKVGSFI
                     TLNKEAAFGVAEELGDAGIDPNNMLSGLPIGIKDNIVTKNLRTTAASKILENFDPIYD
                     ATVVSKLKNAQTINIGKLNMDEFAMGSSTETSYFHKTHNPWDLSRVPGGSSGGSASAV
                     AAGEVLFSLGSDTGGSIRQPAAFCGVVGMKPTYGRVSRFGLIAFASSLDQIGPITKNV
                     EDNAYLLEAISGLDANDSTSINQPVERFSNSLTGDIKGLRIGVPKEYLGEGVDPGVKQ
                     AVLDALKTLEKLGATWDEVSLPHSEYGVASYYILASSEASSNLSRFDGVRYGYRSPNA
                     TTLEELYTKTRSEGFGDEVKRRIMLGTYALSSGYYDAYYKKAQQARTLIKQDFVNVFE
                     NYDVIIGPSSPTTAFKIDGMINDPITMYSNDILTVPINLAGVPAISVPCGFSDGLPVG
                     LQIIGNYFEESLLYKVAHAFEQETTFHKEKPNL"
     gene            23889..25319
                     /gene="gatB"
                     /locus_tag="U0290_000659"
     CDS             23889..25319
                     /gene="gatB"
                     /locus_tag="U0290_000659"
                     /EC_number="6.3.5.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp-tRNA(Asn)/Glu-tRNA(Gln) amidotransferase
                     subunit GatB"
                     /protein_id="HEM2300709.1"
                     /translation="MNFETVIGLEVHVELKTNSKIFSSAPAHFGAEPNTNTTVVDLGM
                     PGVLPVLNKRAVEFGMKAAMAINCEIAKHTKFDRKNYFYPDNPKAYQISQFDKPIGEH
                     GWIEIEVGGKKKKIGITRLHLEEDAGKNTHTSHGYSLVDINRQGTPLIEIVSEPDIRS
                     AEEAYAYLEKLKSIIQYTGVSDVKMEEGSMRCDANISIRPIGQEEFGVKTELKNLNSF
                     NNVRKGIEYEEKRQAEVLKSGGIIDQETRRFEEATGKTSLMRIKEGSDDYRYFPEPDL
                     VDLFIDDAWKERIRAEIPELPDKRQIRYINDLGLPAYDAMVLTLTKEMSDFFEATLAA
                     GADAKQASNWLMGEVSAYLNAEQKELHETGLTPENLAGMIKLIEAGTISSKIAKKVFR
                     ELAQNGGDAEQVVKDKGLVQISDEGALRTIISEILDNNEQSIVDFKNGKDRAVGFLVG
                     QVMKATKGQANPPMVNKLLLEEMNKR"
     gene            25465..26397
                     /locus_tag="U0290_000660"
     CDS             25465..26397
                     /locus_tag="U0290_000660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465278.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase"
                     /protein_id="HEM2300710.1"
                     /translation="MQKHARVIYNPTSGREIIKKNLADVLSILEQAGYVTSAHATTAE
                     PDDAKHAAEEAVRDRFDLVVAAGGDGTINEVINGIAEKEYRPKVGIIPTGTTNDFARA
                     LHVPRDVIKATKIIAAGQSVAMDIGKANETYFINIGGGGRLTELTYDVPSRLKTMLGQ
                     LAYYLKGIEMLPSLKATKVKVEYDQGVFEGEVMFFLLGLTNSIGGFEKIAPDAKLDDG
                     KFSLIIVKKVNLAEFIRLVTLALRGDHIKEPNVIYVKSEKVIVNSEDKMLINLDGELG
                     GETPMEFRNLRQHIEFFASVDDIPATDLFIKENS"
     gene            26545..27300
                     /locus_tag="U0290_000661"
     CDS             26545..27300
                     /locus_tag="U0290_000661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465277.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300711.1"
                     /translation="MTSGHQFKRFTMIIIVLIIAIAAAVFFFWQVDAEEQAPKVSKTE
                     LIESNKVWINNQMQIPIQDNIILSIPAANTNTTIATNGDLILETTNEEILNELASSDN
                     RYKGIKAYRLRIEAKKVSEYITNTKYRYPTTTIQKKFANYEITSGERSVQTEKTPVKI
                     EDTTNNNIKVSLKTSYSSDDAEVAAGIFNSQIPEETTITDNTKALTTNKNVTIYPKTF
                     IYDFTLQKNTMLVFKEQEEAVIKEPIGIEYIIK"
     gene            27324..28685
                     /gene="rlmD"
                     /locus_tag="U0290_000662"
     CDS             27324..28685
                     /gene="rlmD"
                     /locus_tag="U0290_000662"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEM2300712.1"
                     /translation="MEASLLKKNQSIELTIEDLTHDGSGVGKIDGYPLFIPNTLPGEK
                     VTAKIIKLNKNYGFARMETIESVSADRVEPPCAVYSKCGGCSLQHLSYEGQLAFKRNQ
                     VEETMKRIGKLNVDVPETLGMENPWRYRNKSQVPVGFVNGKLTAGFYQKRSHAIIDMS
                     TCLIHNEQGDFAVQKTREILAKYGTEPYDEQTGKGDIRHIMTRFAHTTGQLMIVLVTT
                     KERMPFKEEIVRELVEQLELTSIVQNINPHKTNVIFGDRTKTLWGKDIIEDTIHGIRF
                     AISARSFYQVNPIQTEVLYQQAIDAAELTGEETVIDAYCGIGSISLCLAKKAKHVYGV
                     EIVDQAIQDARANAELNELANTTFETGKAEEVIPAWYKAGIVADVLVVDPPRKGCDEK
                     LLETILAMKPKKVVYVSCNPGTLARDMKILTDGGYVAKKVQPVDMFPMTTHIEAVTVL
                     HLN"
     gene            29020..29574
                     /locus_tag="U0290_000663"
     CDS             29020..29574
                     /locus_tag="U0290_000663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465275.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate metabolism regulator"
                     /protein_id="HEM2300713.1"
                     /translation="MAITMYIDQPGASLNYETTHPHFKEHFKASFYLDGQDSYGPFGY
                     KDGLEVLRRLEEYFSDKSDQGLNLSSFPKYMMETVKKANYVPAKDDGVERLKQLLAEF
                     GSDVRASDRITVSAALAQIKITGYILPALRDAALESLHREIELNKIENIDAGYADSMF
                     YDLLTFTKDYTSVLPDMWCRHCTE"
     gene            complement(29605..30078)
                     /locus_tag="U0290_000664"
     CDS             complement(29605..30078)
                     /locus_tag="U0290_000664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009926778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate kinase"
                     /protein_id="HEM2300714.1"
                     /translation="MGAGKTTVGNILANLADLPYIDIDEVITSEQGMSVSDIFAKYGE
                     KEFRRLEHEKLKELATTKAVIATGGGIVLNPENREVLKNTYPVIYLETDPEVFMNRLK
                     GDTTRPLVQQKTAEEIRAIFEPRIAHYQDSADFIVNTDNRNQEEVARAILTMLDK"
     gene            30302..30811
                     /locus_tag="U0290_000665"
     CDS             30302..30811
                     /locus_tag="U0290_000665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465273.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300715.1"
                     /translation="MIENELEHAKKMEKIEFGVNRRLIFSSCLLWMAVGLLLYVVFSH
                     IKGVNGIEEMILLVFIGLCVLRPLFRLINIAPTVELTERGVAYRGDFKSWNEIKKTEL
                     KKPAMMLFSQGRLKIMTSINGREEVAWDIVAADVSISLEELEKLIQSMRSTYTNDETI
                     GMEIFVEKK"
BASE COUNT        10243 a         5131 c         6794 g         8677 t
ORIGIN      
        1 aaaagtccta attatttagg gctttttttg ttgaagtgtt tcttttgtca gctatcttaa
       61 tggatgttat attagtaaaa gactcagtgg aatgtagttt ttaggtggag gggttatttt
      121 agtggataac ggtatattta tagtggctac tatttttatt gtaaatattt tgtatgtgac
      181 gatttatacg gtgaggttac ttttaacgat gaaaggttat cgttacttag ctgcactttc
      241 aagtgtgttt gaaatgatta tctatgtagt tgctcttagt ttggttttgg ataacttaaa
      301 taatattgcc aatgttttag catatgctat tggatttggt gtaggaatta ttgttggtat
      361 gaaaattgaa gagcgaattg ctttaggcta tattacagtg aatgttatta ccaaagaata
      421 taacttagac ttaccaaatc aaattcgaga tctaggttat ggggttacta gttggcttgc
      481 gagtggacgt gatggtgaac ggatgatgct tgaaattttg actcaaagaa agaatgagcg
      541 gaaattatat aaacacatta ttgaaattga taatggggca tttattgttt cctctgagcc
      601 aaaacaaatt cacggtggtt tttgggttaa acaagttcgg aaatgaagag gagcttacct
      661 ttgatggtag cttctttttt tatttattta gtgaaattag atacataatg ctagtaaaaa
      721 gagcaaatac gacctaaaca cgaacgttaa taaaatgtaa caattaaatg ttcgattttt
      781 cgttgacatt tatcgtgcct attgttagaa tgaaggagtc gaaaagagat tattaaggag
      841 ttgatcacgt aatgcctgct gtaattggtg tcattatggg gagtacctca gattgggata
      901 caatgaaaaa agcatgtgat gtattagatg aattagaaat agcttatgag aaaaaagtgg
      961 tttctgctca tcgtacacca gatttaatgt ttcaatatgc agaacaagcg cgggaacgtg
     1021 gtttgaaaat tattattgcc ggtgctgggg gcgcggcgca tttgccaggt atgattgcgg
     1081 caaagacgac tttgcctgtt attggtgtgc caattaaatc aaaagcgttg aatggaatgg
     1141 attcgttact ttctattgta cagatgcctg gaggtgttcc ggtagcgaca gttgctattg
     1201 gagaaagtgg tgctgtaaat gctggccttc tagcggcgca aattttatcc ataacggacg
     1261 atgcaattac taacagatta caaaaaagac gtgctacact agaagaaaca gttctagaaa
     1321 gtagtgatta tcttggataa aaaattttta ctgacaaata gtactattgg tattattggt
     1381 ggcggacaac ttggacgtat gcttgctctt gcggcgaaag cgatggggta tcgtattatt
     1441 gttcttgatc ctaccgctga ttgcccagct gctcaagtaa gtgatgaaca aattattgct
     1501 gactatgatg ataaagtagc attacgcgaa ctttccgaaa aagcagatgt agttacatat
     1561 gaatttgaaa atatcgacta tgatgctttg aaaatgacgc aaaacttagt atctgtcccg
     1621 caaggatcgg aattgctttc gattacacag gataggattt tggaaaaagc ttatctggaa
     1681 tcagctaata ttaacattgc gccgtatgcg gttatagtgg aacaagatga aattgaaaat
     1741 gaaattaaaa gtattggata tcctgctgtt ttaaaaacgg cacaaggtgg atacgacggg
     1801 aaagggcaag tggttattca tgatgcaagg gatattgaaa cagcagcgag attgttgcga
     1861 tacggctctt gtgtactaga agcttggatt ccttttgaaa aagagatttc tgtggttgtc
     1921 gctcgtaatt tagaagggca aatagaaact tttccagttg cagaaaatgt acatgtaaat
     1981 aatattttgc atacaactac ggctcctgca gatgtggcgg atgacgtgca tgaggaagcg
     2041 gaagaaattg cgagaaagtt agcagatgta cttcaattat gtggtgtttt agcagtagaa
     2101 atgtttgtga caaaatcagg ggctatttat gtaaatgaac ttgctccaag acctcataat
     2161 tctgggcatt ttacaattga agcttgttct atttctcagt ttacgcagca tattcgagcg
     2221 attgttggat tgccacttgt aaaaccagaa ctcttaaaac cagccttaat gattaatatt
     2281 ttagggcaac atgtcgatgc agtgaataaa caaatggtga attatccaca ttggtttgta
     2341 cattattatg gaaaaaaaga agcgaaaatc aatcgcaaaa tgggtcatgt tactgtgctt
     2401 gctgatgaac caaaagcggt tatacaagat ttagaagaaa cgcaaatttg gaagtaactg
     2461 gaggaattta aaaggatgtt agaacgttat actcgtaaag aaatgggcaa catttggaca
     2521 gaacaaaatc gttatcaggc ttggctagaa gtggagattt tggcttgtga agcatgggca
     2581 gagcttggtg atattccgaa agaagatgtt gcgaagatcc gtgctaatgc aaagtttgat
     2641 gtggatcgga ttcatgagat tgaactagaa acgagacatg atgttgtggc atttactcgt
     2701 tcagtttctg agtcgcttgg tgcggaacgt aaatgggttc attatggctt aacttcaaca
     2761 gacgtagtgg atacagcgaa ttcttattta cttaaacaag cgaatgagat tttgcgtaag
     2821 gatttggaaa atttcattgc gattattggc gaaaaagcaa aagaacataa atataccgta
     2881 acaatgggac gtacacatgg tgttcacgcg gaacctacta cttttggctt gaagcttgct
     2941 ctatggtacg aggaaatgaa acgtaaccta gaacgtttta attttgcagc tgatggtgtg
     3001 gaattcggga aaatctctgg tgcggtcggg acgtatgcga atattgatcc ttttgtggag
     3061 gcttacgtat gtgaaaaatt aggaacaact cctgcgccga tttctacaca aacgttgcaa
     3121 cgcgatcgcc atgcagaata tttggcaaca cttgcattaa ttgcaacttc tgtagaaaaa
     3181 tttgcggtag aagtacgtgc actgcaaaaa agtgaagtgc gtgaagtgga agaattcttt
     3241 gcaaaaggac aaaaaggttc atctgcaatg ccgcataaac gtaatccaat tggttcggaa
     3301 aatgtaactg gattagcgcg cgttattcgc ggtcatatgg ttactgctta tgaaaatgtg
     3361 ccactttggc atgaacgtga tatttctcat agctcagcgg aacgaattat tctgccagat
     3421 tccactattt tacttgatta tattttgaat cgttttggaa atatcgtgaa aaacttgacg
     3481 gtgttcccag aaaatatgaa acgcaatatg gacagaacac tgggacttat ttattcacag
     3541 cgtgtattac tggcacttat tgataaaggt ttagctcgtg aggcggcgta tgatgtcgta
     3601 caaccaagag caatggaagc ttgggaaaaa caagtacctt tccgtgaatt agtagaacaa
     3661 gatgcaacca ttattgaaaa cctatctgcg gaagaaattg cagattgctt tgattacaac
     3721 tatcacctga agaatgtcga cttaattttt gatcgtttag gattataatt acgggcagaa
     3781 tacaacctaa cctctttgat atttattttt tcaaagaggt taagtaattt ataaggagat
     3841 aaattatcgt gactaatgaa ctggtttatg aaggaaaggc aaaacgactt tttaaaacag
     3901 aagaagcagg tgtcttgcgt gttgcctata aggatgatgc gacagcgcta aacggggtgc
     3961 gaaaggaatc ttttgctggg aagggtgagc ttaataacca aattacatcg cttatttttt
     4021 ctcatttagc aggagcggga atagagagtc attttattcg agcgatttcg gaaacggagc
     4081 aattggtgaa agaagtatca attattccac ttgaagtggt tgttcgcaat gtgatggctg
     4141 ggagtcttgc gaaacggctt ggaaaagaag aaggcgagct aattccaaat gcgatagtag
     4201 aattttacta taaagatgat gcgttagatg acccgtttat taatgatgac catgtgcttt
     4261 atttagagct tgcgacaacg agtgagatgg atataattcg ccaggctgct cgttcgatta
     4321 ataaggtgtt acaagaatta ttcaatcaaa tgaatattac gctaattgat tttaaattag
     4381 aatttggtcg ggatgcgact gggaatattt tactagcaga tgagatttcg cctgatacat
     4441 gtagactttg ggacaaggaa acaaatcaaa agctcgataa ggatgtcttt cgtcggaata
     4501 ttggcaattt aacagatgtg tatacagaag tattgaatag attaaagcaa gttcaaaact
     4561 aggaggccac aaaatgtata atgtcaaagt ttatgtcact ttaaagaaaa gcgtattaga
     4621 tccacaaggt gttgcagtaa aagatgcagc gaaaagcatg ggttatgagg aagtagaaga
     4681 tgttcgtatt ggtaaattta tggaactaaa agttgtgaaa tcagatcgag atattcatga
     4741 agtattgaat gaaatgtgcg acaaactgct aacaaatccg gtgatggaag attaccgata
     4801 tgaaatagag gaggcttaaa cgatgaaatt tgctgtcatt cagttcccag gttctaattg
     4861 tgatcttgat atgctacatg cgattcgcga ttctcttggc gaggaggcgg aatatgtatg
     4921 gcatgcggaa acaagtcttg caggctttga cgcggtttta cttccaggtg gattttctta
     4981 cggagattac ttgcgaactg gtgcgattgc gaaattttca agtattatgc cagaagtttt
     5041 acgctttgct gaaatgggaa aaccagtgct tggtgtgtgt aacggattcc aaattttaac
     5101 tgaaattggt ttactgccag gtgctttaat tagaaacaat aatttgcatt ttatttgtaa
     5161 gacggtgccg cttcgtgtgg cgaatgcaag tacgatgttt accgggcttt ataaagaagg
     5221 cgaaattatc caagttccag ttgctcacgg ggaaggtaat tattactgtg acgatgaaac
     5281 acttttaaaa ttaaaagata ataaccaaat tgtgtttaca tatgatagcg tgaatccgaa
     5341 tggtagccgt gcggatattg cggggatcgt aaatgagcgc ggtaatgtgc ttggaatgat
     5401 gccacaccca gaacgcgcgg tagaagaaat tattggcggt acagatggtt taagactttt
     5461 cgagtccgtt gtaaaagctt ggaaggagga acaagtaaat gcctaacatg gagccaacga
     5521 caaaagaaat taaagaacaa aagatttatc aagaaatggg cttaactgat agtgaatatg
     5581 agcttgtttg ttcgattctt ggacgcgagc ctaattatac agaaactggg cttttctctg
     5641 ttatgtggtc ggaacattgt agctataaaa attctaaacc agtacttcgg aaatttccta
     5701 cagaaggcaa acaagtatta caaggacctg gtgaaggcgc tgggattgtc gatattggcg
     5761 atggtttagg tgttgctttt aaagtggaga gtcataatca tccatcctac gtggagccgt
     5821 atcaaggggc tgcgactggg gtcggcggga ttatccgtga tgtgttctcg atgggagcta
     5881 gaccgattgc aatgcttaac tcgcttcgtt ttggtgagtt agatacaccc catgcgaaat
     5941 acttagttag tgaagtcgtt gcgggaatcg caggatacgg taactccatt gggattccaa
     6001 cggttggtgg cgaaatccaa tttgatcctt gttatacaaa aaatccgcta gttaatgcaa
     6061 tgtgtgttgg tttaatcgag gcgaaagata ttcaaaaagg gcaagcaaaa ggaattggta
     6121 atccggtgat gtatgttggc gctaaaactg gtcgtgacgg gattcatggt gctacttttg
     6181 cttctgtaga gtttagtgaa gaaggcgaac aacaacgctc tgctgtacag gttggcgatc
     6241 cttttatgga gaaattgttg cttgaagcat gtttagatgt gattcgtgat cattcagata
     6301 ttttagtggg aattcaagat atgggggctg caggtctcgt tagttcaagt tctgaaatgg
     6361 cctcaaaagc gggcgctggg ctagaattaa ttatggatga tgtgccgcaa cgagaactaa
     6421 atatgacgcc ttatgaaatg ttgctttctg aatcgcaaga acggatgctt ctatgtgtga
     6481 aaaaagggca tgtggaagaa atccaagcgt tatttgaacg ttatggttta gaggctgttg
     6541 tgattggtca agtaacagat gataaaatgt acaaaattat tcatcatggt gaagtagttg
     6601 cgaacgttcc tgtagatgcg cttgcagaag atgcgccagt ttatcataaa ccttccaaag
     6661 agccagctcg ttatcaagct ttccaagaag aggaatcgtt tgtgccagtt atggaagatg
     6721 tggtcggtgt ttggaaggaa ctgcttgctc agccaacgat tgctagtaag cgccatattt
     6781 atgagcaata tgattatcaa gttcggacgg atacagctgt tgtacctggt tcagatgcgg
     6841 cgattgttcg tgtgcgtggg accgagaagg caattgccat gacaactgat tgtaactcac
     6901 gctatttgta tcttgatcca gaagtaggcg gagcgatagc ggttgcggaa gcggcgcgca
     6961 atatcgtttg ttctggcggg aaaccactag cgattacaga tggactgaac tttggaaatc
     7021 ctgaaaaacc agaaattttt tgggaaattg aaaaagcggc tgatggtatt agtgcggctt
     7081 gtttagaact tgatacgcct gttatctctg gtaatgtatc gctttataat gaaacagatg
     7141 gtaccggaat ttatccaacg ccagtcattg gaatggttgg tttagtagaa gatttggcac
     7201 atattacgac acaagatttt aaaaatagtg gcgatgtgat tttcttaatt ggtgaaacaa
     7261 aagctgaata tagtggttcg gaattgcaaa aattgcaaca agggaaaatt agcggacgtg
     7321 cgccggaatt agatttaacg acagagaaaa aataccaaca attacttcta acggcgattc
     7381 aggaaggtct agttgcttct agtcacgatt tggcagaagg tggatttggt gttgcccttg
     7441 cggaagcgac ttttaaagca gggcttggtg cggatgtaga agtaccgttt gagttgaatc
     7501 aactattcag tgaatcgcaa tcacgtttct tagtatcggt aaaaccggaa aacgaagcag
     7561 cttttgcgca attaatggaa ctggaaaaag tataccgcct tggtgtagta accgaggatg
     7621 atacgattcg tgtgaaacat aaggaaaatc aagttacagc gaaaacaacg gaattacgat
     7681 ccatttggga aggggctatt ccatgcttgc tgaagtaaaa ggacttaacg aagaatgtgg
     7741 tatttttggt atttgggatc atcctaatgc agcggaaatc acctattatg ggttgcatag
     7801 tttacaacat cgcggtcaag aaggtgccgg aattgtttcg acagacggtg aaacactaaa
     7861 aggtcaccga aatctcggcc ttttagcaga cgtatttaaa catggtgaac tagacgattt
     7921 aaaaggtaaa gcagccattg gccacgttcg atatgcgaca gctggtcaaa aaaacttagg
     7981 gaacgtacaa ccatttttat ttcactttca tagttcttct ttagcacttg cgcataatgg
     8041 aaatttggtt aatgcgaaaa gtttacgccg tgaactagaa gaagaaggcg ctatttttca
     8101 aacgagttcg gatacagaag tgttagcgca tttaattaaa cgtagccata caggtgattt
     8161 tgtggaagat ttaaaagtgg ctttgaacaa ggttaagggt ggctttgcgt acatgcttct
     8221 gacggaagac acgatgtatg cggcgcttga cccgaatggt tttagaccgc tttcgatagg
     8281 tcgcattggt gattcttacg tagttgcttc ggaaacatgt gcctttgaaa cggttggcgc
     8341 tgagtttgtc cgcgatgtgg agccaggtga actaattatt attaatgatg acgggcttcg
     8401 aattgaaaaa ttcacggaaa atgtgacgca ttcgatttgc agtatggaat acatttattt
     8461 tgcgcgacct gactctaata ttgctggaat taatgtccac tcggcaagaa aacgttctgg
     8521 gaaaagatta gcaaaagagg cttttattga tgcagatgtg gttacaggtg taccagattc
     8581 cagtatttct gcagcgattg gttatgcgga ggaagctggt cttccttacg aacttggtct
     8641 catcaaaaat agatatgtgg caagaacttt tatccagcca tcacaagaac ttagggaaca
     8701 aggcgttaga atgaaacttt ctgccgtgcg cggggttgtg gaaggaaaac gcgttgtcat
     8761 gattgatgat tcgattgttc gcgggacgac aagtaaacgc attgtccagc ttttacgtga
     8821 agcaggagcg gcggaagttc atgtaagaat cgcttctcca ccacttgctt atccttgttt
     8881 ttatggaatt gatatccaaa cgcgaaatga attaatcgct tctaattatt ctgttgatga
     8941 aatttgtcgg attattgggg ctgattcttt agagtatttg agtgaagaag gtttagtaga
     9001 ttccattggc agaccttatc cgaacgaacc ttacggggga ctttgtatgg cttatttcaa
     9061 cggcgattac ccaacccctt tatatgatta tgaagcggaa tatttagcga gcttagaagc
     9121 agaaaaataa tgaggagtga caaatcgaat ggcagaaaat gcatatagta aagcaggcgt
     9181 ggacgtagaa gctggctatc aagttgtaga acgtatcaaa aaacatgtgg ctagaacaga
     9241 gcgattaggc gcgatggggg cacttggttc atttggtgga atgtttgact taagtagttt
     9301 gcatttaaaa gaacctgtcc ttgtttctgg tacggatggt gttgggacaa aattactttt
     9361 ggcaattgaa gcagataagc atgataccat cgggattgac tgcgtggcaa tgtgtgtgaa
     9421 tgacatttta gctcaaggcg ccgagccatt atttttctta gattatatcg ctactggaaa
     9481 aacagatcca gtgaaaatgg aacaaattgt taaaggcgtg gctgacggct gtgaacaagc
     9541 tggtgcggct ttaattggcg gcgaaactgc tgaaatgcct gatatgtacg gcgcggaaga
     9601 ttatgattta gctggtttta ctgttggggc tgtagagaaa cagaagctaa ttacagaagg
     9661 cgcagtcaaa gaaggagata cactcattgg tattccatca agcggaattc atagtaatgg
     9721 ttactccctt gtgcgtaaaa ttttctttaa agataacgaa ttgacactcg atgcggaaat
     9781 cagtgaacta gatgtaccgc ttgtggaaga gctacttaaa ccgacacgga tttatgtgaa
     9841 gccagtttta gaagtattga aagaggtaga tgtgcacgga attacgcatg tgacgggtgg
     9901 cggatttgta gagaatttac cgcggatgtt aacaaatgat ttagctgtca aagtggagct
     9961 aggttcatgg ccggtgttgc cgatttttga cgttatgaag aaatacggcc aattgagcga
    10021 acttgaaatg tatgaaattt tcaatatggg cattggtatg gtgttggcag ttgcgaaagc
    10081 ggatgtggaa agaacattag aagtactcgt tcaaaacggg gaagcggctt atgttattgg
    10141 agaagttacg acacgtgaaa atgatgcggt tattttcaca ggaggcacaa aaggatgaat
    10201 atagccattt ttgcttcggg taacggttcg aattttcaag ctttagtgga tgatgcgttt
    10261 attaagcctc atgtgaaact actggtatgt gataaaccaa atgcttatgt tttagaacgc
    10321 gcaaacacac atcagattcc ggtgttcctt tttgaagcga aaaattatcc ggataaagaa
    10381 gcttttgaga cagaaatttt actagaactt cgcgggttgg aaattgattt gttagtgcta
    10441 gcaggatata tgcgtttgat tgggccgact ttattagcag aatttcccga gcaaattgtc
    10501 aacctgcacc catcgttgtt acctgaattc aaaggaaaag atgcaattgg tcaagcaatt
    10561 caagcgaatg tttcagaaac tggtgtcacc gcgcactttg tggatgcggg aatggatact
    10621 ggaccaatta ttgatcaagt gaaagtaccg attgaacatg cggaaactgt agatacttta
    10681 gctggaaaaa ttcatcaagt agaacatatt ttttatccaa aagtgattcg aggattaatt
    10741 caaaatggag ggaacgatta attatcatga aaagagcgct tattagtgtg tcagataaaa
    10801 acggcatcgt gccatttgca gaaaaattag tagaacttgg agtagaaatt atttcgacag
    10861 gtggaacaaa agcggcattt gaacaagctg gcgtaccggt aacaggaata gaagaagtaa
    10921 ctgaatttcc agaaatgctt gatggtcgcg ttaaaacact tcatccagca attcatggtg
    10981 ggttactggc aagacgcgat acagctgaac atatggaagc tattgcggca cacgatatca
    11041 agccaattga tttagtcgtt gtaaatttat atcctttcca agaaacgatt caaaaatctg
    11101 gtgttacttt agaagaagcg attgaaaata ttgatattgg cggaccttcg atgttacgct
    11161 cagctgcgaa aaattatgca gcggtaactg ttgtagttga tacagcggat tacgatacgg
    11221 tacttacaga actagaagaa cacggcgcaa ctacttttga aacgcgccaa cgtctagctg
    11281 cgaaagtttt tcggcacaca gcggcctatg atgctttaat tgcagaatac ttaacgaaca
    11341 tcactggaga aactttccca gaaaaagtaa cattaactta caatcgaaaa caagttttgc
    11401 gttatggtga aaatcctcac caagatgccg ctttttatac agaacctggc acggtagaaa
    11461 attcaattag ttccgcgaaa cagttgcacg gtaaagagtt atcttacaac aatattcggg
    11521 atgcagatgc agcacttaaa attgcaagtg aatttacaga gccggtcgcg gttgcagtaa
    11581 aacatatgaa tccatgcggc gttggtgttg gagaaaatat tgaagaagct tatttgaaag
    11641 cttatgaagc ggatgaaacg tctatttttg gagggattgt tgccttaaat aaagaagtgg
    11701 atgcgaaaac agccgaacat atgagcaaaa ttttcttaga aattattatt gcgccaagtt
    11761 tctctgaaga agcgtttgcc attttagcga aaaagaaaaa tattcgcttg ttaactgttc
    11821 cgtttgccgg ttccgtaaaa ggtttcgaga aaacatctgt aaatggtgga cttcttattc
    11881 aagcgagcga ttctgttata gaagatacag cgagttatga agtagtaacg gaaaaacaac
    11941 ctacagaagc ggaaatgaaa gcattaattg ctcagtggaa aattgtgaaa catgtaaaat
    12001 ccaatgcgat agtagtagga tctgataaac aaacacttgg aattggtgca ggacaaatga
    12061 atcgaatcgg ttccgcgtta attgcactta agcaagctgg cgagaaagca aaaggtgctg
    12121 tacttgcctc ggatgccttt tttccaatgg atgatacggt cgaagctgcg gcaaaagcgg
    12181 gaatcacagc gattattcag cctggtggat ccattaaaga caaggaatcc attgagatgg
    12241 caaacaaata tggtatttcc atggttctaa ctcatgtacg acacttcaaa cattaatcct
    12301 caaaaaggac gtgtaaataa atgaacttat tagtagttgg tagcggtggt agagaacatg
    12361 ctattagtaa aaaattatta gaatccaaca atgtcgaaaa tgtatactgt gctccgggaa
    12421 acgacggaat gcgtttagac aacatccaac tcgtagctat ttctgaaacg gataaagctg
    12481 gtttaattga ttttgctaaa aaagcagaaa ttgcttttgt tattgttggg cctgaagtgc
    12541 ctcttttaga aggcgttgtc gatgctctcg aagaagctgg aattaaagca ttcggtccaa
    12601 aagcaaatgc agcattaatt gaaggcagca aagattttgc gaaacaattt atggagaaat
    12661 atgctattcc aaccgcagca tcaaaaacct tcaccgatta tgcggaagcg aaagcatact
    12721 tggatgagcg cggtgtgcca atcgtcatta aagcagatgg actcgctgct ggaaaaggag
    12781 tcactgtagc gttagaaatg gaagaagcag ttcttgcatt aaaagatatg atgctagaag
    12841 aaaaattcgg tgacgcatct ctcaaggtcg ttatcgagga ctttttagcg ggagaagagt
    12901 tttcattgat ggcgtttgta aatggggaag aagtttatcc aatggctatc gcgcaagatc
    12961 ataaacgcgc ttatgaaggc gataaaggac caaatactgg cggaatggga gcttattctc
    13021 cggtaccaca tatttctgaa acagtagtag acgaagctgt cgaaaaaatt cttcttccag
    13081 ctgcaaaagg aatggtaaaa gaaggtcgtt atttccgcgg aattctctat gctgggctta
    13141 tcttaaccgc agaaggccca aaagtaattg agtttaacgc acgctttggt gatccggaaa
    13201 cacaagttgt tttgcctcgt ttagagagtg attttgcagc actgatagac gctttactcc
    13261 ataacgaaaa accagatgtg cgctttaaaa aatcagggat tacgctagga gttgtcctag
    13321 caagcgccgg ttatccagag cattatgaaa aaggaaacaa attaactggt ctaaatgatg
    13381 ttgcagaaga tgtagcgatt tatcatgcag gtacaaaaca agatgaaaat gacgatttta
    13441 tttctgatgg tggacgcgtc ttgctactag caaaagaagc agaaacgatg actgatgcac
    13501 gcacattact ttatccagaa atgcaaaaac tagataaccc gaatttcttt tatcgaattg
    13561 atattggcac aaaagcagaa taattgaaaa gtactatctc aaggataaat tcctagatag
    13621 tacttttttt gttcattaag tgaagagaaa cgtttgtgtt ttacgcgttg gtacgttaaa
    13681 atatgaaagt aggatatatg agattatttg gaggtaaaga tatgcaaata gagaagttgc
    13741 gtggacaagg attggatgaa ttcttccaag ggattttaac gctcgagaat ttagaagaat
    13801 gttatgcttt ttttgatgat gtttgtacag tgaatgaaat acagtccatg gctcaacgtt
    13861 tccaagtagc aaaaatgctt catgatggaa aaacatataa tgtgattgaa tctgaaactg
    13921 gggcaagtac agcaactatt tcacgtgtaa aacgttcact tcattatggt aatgatatgt
    13981 atgatgtagt attttcaaga atgacgaagc cagaataaga ttgtagggat tatattgaaa
    14041 aagtttaata gtaaaaccta tcagattgtc atcatctcta ttcttgcgct tgcagttatt
    14101 tattttgtga ttaatatgat tgccactggc acggggcttg atttttcttt actgtggcac
    14161 tgggtcttta ttatttgttt tattttcacg acacttgcta atgttagaga aaaacgagca
    14221 attggtacgg cgattggcct tagtggaatc ttgatttgtg taacaagcat tgtccttatg
    14281 gcaatataag aaaagcaatc tcgctaaaaa cttagcggat tgcttttttt gttaaaacag
    14341 aaaatcgatt aaaccagttg cggagaggaa gacgaaaata atcgcgattg gtgcaatata
    14401 tttaataaga aagagccaaa gaataaacac tttttttcca aaatggctgc ttgtggtaaa
    14461 ttcttttaaa agtaattcac gaggtaatcg gtaaccaacg aaaattgcga taaataaagc
    14521 accaactggc aagacaatat tcgacacaag ataatcggca gcatcaaaaa tacttagtcc
    14581 gaaaatctga acatcgctcc aaacgccaaa actaagcgca cttggaatag ccatcaagac
    14641 aatcacgagc cccatccaaa gacttgcttt tttacgatta acacccgcat tcatcagtgg
    14701 cgcaaccgtt gcttcaagca tcgagaaact agaggttaat gcggcgaata agaataaaat
    14761 caagaaaata ataaagaaca acatcccaaa gggcatttga ttgaaaatcg aaggtaaaat
    14821 aacgaatagc aatccaggtc ccgcatctgg tgtaatatta aacgaaaatg ctgccgggaa
    14881 aatggccaat cccgcaagaa gcgacacaaa cacattcata agcgaaaccg aaatggcaga
    14941 ctgcggtaaa ctagtcgacc gatttaaata agaactatag gtcaccatta ctgaaatccc
    15001 cacactgagt gagaagaagg cctgaccaag cgttataaga accgtttgcg ctgtgaaatg
    15061 actaaaatct ggacgtaaga aaaatgcgac accttccatc gcaccaggta gtgttaagga
    15121 cctgataatt aaaacaataa ataaaataaa tagagctggc atcataaact tactcatttt
    15181 ttcaattcca ctaacaactc cgcggctaat aacaatgaca tttagtaaaa taaagagaat
    15241 cgttgcgcca actgatatcc acgggttagc tgtcgtcact tggaaatcat gcagcagact
    15301 tgcttgattt tcgccagcaa tcccgccagc aagtgtttta attaagtaag tgataatcca
    15361 accaccaact acgctataaa acgaaaataa aatacttgcg cctacaacgc ctaattttcc
    15421 aagtaaattc cactttgttc cgggcgcgag tgttttataa gcttgaacag catctccgcc
    15481 agagcctcgt ccaatcacaa attctgcaat taaaagtggc atcacaacga gtaaagttaa
    15541 aactaaaaac aataagaaaa atgcgccacc tcctgcagtt gcagccacat aaggcagttt
    15601 ccaaatcgca ccaattccta ttgcggaccc agcggatgct aatataaacc cgacttttga
    15661 gccccattct tctctgtttt cttgcataat atccccattt ccttttttct atgtaaatac
    15721 tcagaagtct taataaaatc aaattttcct catcatacca taaaataaaa gctatcccaa
    15781 cagcaactgg taaaaaaagc ttaaaaaaag ttaaaatttt tggtcgtaag ggtgcgatga
    15841 aatgtaacta atgctataat aagatatccc attatagaga cttggaggag caaatgaagc
    15901 atttattcaa gttagaccca gcaaagaatt taccaatgaa tgatctaacg aagctcgtcc
    15961 attctggaac caatggattt attattggtg ggacggataa tgtacaaatc gaagcagtcc
    16021 aaaagctcta cgaattatta ggtgaaacgg acttgccgat tttccttgaa ataagcaacg
    16081 aatccatgat tttacctgaa gcagaccatt ttttaattcc agtagtgttg aatacagaaa
    16141 atagtaaatg gacacacggt ttacaccagg agttaatcaa agaaatggga gcatttattc
    16201 cttggaaacg agtcacagca gaaggctacg ttattttaaa taaagatgca aaagtggctc
    16261 atttaacaga agcgaagacc gatttaacgg acgaagacat cgttgcctat gcgcggttag
    16321 cagagaatat atttcatctg cccatttttt atgtcgaata tagcggcatg tacggagatc
    16381 cagaggttgt aagaaaagca agcgccgcat taagtaatac aaaattttgg tatgggggcg
    16441 gaatacgttc aaaagaacaa gctgctgaaa tggtaaaata tgcggatacg attattgttg
    16501 gcaatattat ttatgaagat ttagaaaaag cactagaaac cgcaactatt tttaggaaga
    16561 aaacggtttg attataaagt gtagtatgat aaaataagaa caaatgtttg tatggtggtg
    16621 tataggagaa tgcaattgaa tgcaaaagaa ttagtggacg gattgaatcc ggaacaacga
    16681 agagcagtag aaagtacaga aggaccttta ttaattatgg ctggtgccgg aagtgggaaa
    16741 acacgagttt tgacccatcg gatagcttat ttagtgagag aacgtggtgt aaatccttat
    16801 aatattttag cgattacgtt tacgaacaaa gcggctcgcg agatgaagtc acggattggc
    16861 aatttaatgg gcggagaagc agaatctatt tggatatcta cttttcactc gatgtgcgta
    16921 cgaattttac gtcgcgatat tgaccggatt ggctatgaac gtaattttac tattttagat
    16981 ggcagtgacc aattatcggt tattaaaggc attttgaaag aaaagaatgt cgaccctaag
    17041 aagtttgagc cacgggggat tttggcttct attagcaatg ccaaaaatga actgataact
    17101 gcaagcgaat atattaaaga agcaagtggt ttctatgaca aaatggtcgg cgaagtctac
    17161 gaaaaatacg agaagaaact taagaaaaat caagcactcg attttgatga tttaattatg
    17221 gtcaccattc aattatttga acgtgtgccc gatgttttag aatattatca acgtaaattt
    17281 cagtatattc acgtggatga gtaccaagat accaaccacg cgcagtattt actcgtgaaa
    17341 cagcttgctt ctcgtttcaa aaacttatgc gtcgtaggtg actcggatca atctatttat
    17401 ggttggcgcg gggcggacat tagtaacatc atgtccttcg aaaaagatta ccccaatgcg
    17461 aaaaccattt tgctagaaga aaattaccgt tcgacaaaac gtattttaga agcggcaaac
    17521 cgtgttatcg aaaataatgg taatcgtaaa ccgaaaaatc tttggacaag taacgcagaa
    17581 gggaaaaaga ttttttatca taaagcatta acggaaaaag aagaagcagc ctatgtagtt
    17641 atgaaaattc aagaagaagt aaataactcg aatcgaccac tttctgactt tgcgattctt
    17701 tatagaacta acgcccagtc ccgtgtcatg gaagaatatt tcatgaagtc gaatatggcg
    17761 tacacgatgg tcggcggcac gaagttctat gacagaaaag aaattaaaga cattttggcg
    17821 tatttacgtc ttattagtaa taatgaagat gatattagtt tgacacgtat cgttaacgtt
    17881 ccaaaacgcg gcgttggacc aggtacttta gataaactaa ataatgtggc gaccacgtat
    17941 gatttgagct tgtttgaagt ccttaaccgc atcgaactag cgggaatttc gcctaaaata
    18001 agcaaagact tagttgcgtt tcatgatttg attcgcggct tcacgcaaat gcaagatttc
    18061 ttatccgtaa ccgaactcgt agaagaaatc cttgaaaaaa caggctaccg cgcaatgcta
    18121 aaaaatgaac gaaccattga agcgcaaaca cgtttagaaa atatcgacga gtttttatct
    18181 gtaacacaaa actttgaaaa ggaaaatgac gataaaacgt taattgcctt tttaactgat
    18241 ttagcactcg ttgctgacgt cgataagtta gaagaagaca atgaagaaca aaacggggct
    18301 gtcacactga tgacacttca ctctgccaaa gggctagaat tcccagttgt ctttttggtt
    18361 gggatggaag aagggatttt cccacattct agagccattt atgaggaaga tgaaatggaa
    18421 gaagagcgtc gacttgctta cgttggtatt actcgagcgg aagaagaact tttcctaacg
    18481 agcgcttact cacggatgct ttatggtcgt ccgtcctcta atcaggaatc tcgttttatt
    18541 ggagaaatac ctcgagactt acttgagtta ggtaatgaaa acaaattaaa agcagacaaa
    18601 ccatatgcca aaccgcgtat gccacaaaaa acaactactg cgtataaatc ctctggagca
    18661 gaaacgcttg gttggacagt cggcgataaa gccagtcata aaaaatgggg cgtaggaaca
    18721 gtcgtcagtg tcaaagggga aggtagcgga atggaactag atattgcatt cccaagccca
    18781 actggcgtca aacgattgct cgcagaattt gcgccaattg aaaaagtata aatttggaaa
    18841 aagcaggtga agaatgatgg ctgataaaaa aaggtatgag gaactaatca acatacttga
    18901 tcagtacagc tatgattatt atgtaattga taatccaaca gtagaagatg ccgaatacga
    18961 tcagaagatg caagaattac ttaaaataga agaagcgcat cccgagtggg ttacacctga
    19021 gtctccgtca aaacgagttg gcggggaagt tttagaaggt tttaaaaaag tagcacatga
    19081 cacgccgatg ttaagtcttg ccaacgcttt taaccaagaa gacttggcag actttgaccg
    19141 ccgaattcgc gacaaagtgg gcgatgatat tgcttatatg tgcgaactta aaattgacgg
    19201 actagcagta tcccttcaat acgaaaatgg taaatacaaa caaggtgcta ctcgtggtga
    19261 tggaaccatt ggggaagaca ttactgctaa cttgcgtacg attcgctcca tcccaatgaa
    19321 acttcaaaag gactattcca ttgaagttcg cggtgaagct ttcatgccaa aacgctcctt
    19381 ccaaaaacta aatgaaattc gcgaagaaga aggccagatg ttatttgcca atccacgaaa
    19441 tgctgcggct ggctcgcttc gacaattgga cacaaaaatc gcagcgtcga gaaatctcga
    19501 tatcttcctt tatgcagtag cagattttgg tgaaatgggc gttgaaactc atagcgcagg
    19561 cttagatatg cttgaaacac ttggtcttaa agtcaataaa gaacgccgac tttgcaacag
    19621 tttagaagaa gtttatgcgt acattgaaga atggacagaa aaacgcgccg gattagcata
    19681 cgatattgac ggcattgttt taaaattaaa caacttagag caacaacgcc aaatgggaaa
    19741 caccgttaaa tcgcctcgtt ggtcgattgc ttataaattc ccagccgaag aagtaccaac
    19801 taagttactc gatatcgaat taaatgttgg tagaactggt gtgataactc ccaccgccgt
    19861 gttagaacca gtgcgagtgg cagggacaac cgttagccgc gcttcgcttc ataatgaaga
    19921 cctaattaca gagaaagata tccgcattgg cgacaccgtt ttaatcaaaa aagctggcga
    19981 tatcattcca gaagtcatta aaagcatcac cgaaaaacgt agcggaagtg aagaaccttt
    20041 ccatatgcca aaaaattgtc cagcgtgcga tagtgaattg gttcggttag aagaagaagt
    20101 ggcgttaaga tgtattaatc ctaaatgccc agctcaaata aaagaaggac ttatccactt
    20161 tgtctccaga aatgcgatga acattgatgg cctcggcgaa aaagtaatta tccagctatt
    20221 ttcacagcat ttaattaaag atgtagcaga tttgtttttc ctttcgaagg agaaactgtt
    20281 agaattagaa agaatgggtg agaaatcggt aactaattta ctggcatcca tccaagcaag
    20341 taaacaaaac tcgcttgaaa aattactttt cggcttaggc attcgccatg ttggtgcaaa
    20401 agccgccaaa tcacttgcca ttcatttcga tacaatggat aatttgaaag tagcagacaa
    20461 agaaacactg acaagtatta acgacattgg tgaaaaaatg gcagacagta ttgtcactta
    20521 tttcgcgaat gaagaagtac atgatttatt agaagaacta aaaagggctg gcgtcaatat
    20581 gacctataca gggccaaaac tagaagatat gtccgaggaa gaacttgttt tcgcaggtaa
    20641 aaccgttgtc ttaactggga aactagaaaa gttaacgcgg aatgatgcaa aagcattaat
    20701 cgaatccctc ggaggaaatg tttctggaag cgtcagtaag aaaacggatg ttgttgtagc
    20761 tggcagtgat gctggttcta aattagccaa agcggaagaa ctagccattc ctatttggtc
    20821 agaagaagac ttaatagagt acttaccaga cgaaggtgga ttaaacgaat gaaaaaaatc
    20881 ataatagcag cgctcggctt aacgcttgtg ctctctggct gtgccccaaa acttgactca
    20941 aatgataaag tggtacaaaa agatgattca aaagcagaga cgggcatcat gacaaaaaat
    21001 caaatctcat ccaattatta caaaaccgta ctaccataca aagcaagcaa atcccgtgga
    21061 cttgtcgtat cgaatattta ttcacgatat gatattaacg aattagaatc tggtttaatg
    21121 cgtgtttcgc aaaataaata ctccccagat aattatcttt tccaagaagg gcaatatttg
    21181 gataaagaaa cgttagaaaa atggttagat agaaaaagcg ataaaaatcc gaatggttta
    21241 aacccagcca gtaatggtaa cggtgagaat cgtaatccaa tctatctagc acatatttta
    21301 gaacaagatt atttaaaaca aacggacaaa gatacggttg ctcttggtgg gatttctatt
    21361 gcccttgcga tgaattcggt cgattattac caaaaagaaa aatacggaga cacctatgaa
    21421 caaccaatta gtaatagtga attattagca caagggaaag aaatgtctac cactgtgtta
    21481 aatcgaattc gccaaacaaa aggtttagaa aatgttcctg taacgattgc catttacaaa
    21541 caaggagctc gtgatgcggt agctccagga aattacattg cttatgcaac tgcaaatggg
    21601 gacagtcttt ctaattggaa agatatagat gaaaaaaatt atgttttacc atcaactgaa
    21661 tctgctaaag atcacaaaac agataatgac aatttcttga atttcaaaaa agcaattgaa
    21721 gactattatc caaactttac aggtgtcgtt ggtcgtggta gatatgaaga cggtcaacta
    21781 gcagaattaa acattgatat tccgttacaa ttttatggtg aagcagagat tatcggcttt
    21841 acacagtatg tgacggattt agtcggacaa catattccga agacagctga tttgcaagtc
    21901 aatatttcta catctgatgg tccagctgca ttgattacaa gaaaagcaaa tgaagatgca
    21961 gcaactgctc acatttacga ttaataaaaa acaatgcgaa ttgttctttc ctgttgtata
    22021 attatgcagg agaggacagt tcttcccatt tttaacaggc gggaagcact accgcgtagt
    22081 aagtaccact aaaaaggagg atggcatttt gtcaaatata tcaaaagaaa cagtagaaaa
    22141 agtagcaaat cttgccaaac tagaagtatc agaaacagaa gcaacagcct tcgctggtca
    22201 gcttggtaaa attattgagc tagtagagca attaaataca ttagatacaa cgaatgtaga
    22261 acctaccagc catgcaatcg acgtatcaaa cgtattacgt gaagatgtgg caacaaaagg
    22321 gttggatcgc aaagaagtac taaaaaatgc gcctgatgaa caagatggca tgttcaaagt
    22381 accgacaatt atggaacaat aaataggcta aggagggaaa atattttggg tttatttgat
    22441 ttttcagtaa aagaactaca tgataaatta gttaaaaaag agatttcacc attcgattta
    22501 gtatcagaat ctttcaaccg aattgaatct gtagaggaca aagttggttc ttttattact
    22561 ttaaataaag aggcagcatt tggtgtagca gaagaacttg gagatgcggg catagatcca
    22621 aacaacatgc tttctggtct tccaattggg attaaagata atatcgtgac aaaaaactta
    22681 cgtacaacag cagcaagtaa aattttagaa aacttcgatc caatttatga tgcgaccgtc
    22741 gtttctaaat taaaaaatgc gcaaacaatt aatatcggaa aattaaacat ggatgaattt
    22801 gcgatgggat cttcgacaga aacatcgtat ttccacaaaa cacataaccc atgggattta
    22861 tcaagagttc ctggtggttc ttcaggtggt agtgcatccg cagttgcagc aggcgaagtt
    22921 ttattctcgc ttggtagtga cactggtgga tcgattcgcc aaccagcagc tttttgtggg
    22981 gtagtcggaa tgaaacctac atatggccgt gtatctcgtt ttggtttaat tgcctttgcg
    23041 tcttctttag accaaatcgg cccaattaca aaaaatgtag aagacaacgc ttatttatta
    23101 gaagctattt ctggtttaga tgcgaatgat tctacatcga ttaaccaacc agttgaacgc
    23161 ttctcaaata gcttaacagg agacattaaa ggcttacgca tcggtgttcc aaaagaatat
    23221 cttggcgaag gcgttgatcc tggcgtaaaa caagctgtat tagatgcgct taaaacactc
    23281 gaaaaactgg gcgctacttg ggatgaagtt tctttacctc attctgaata cggtgtagca
    23341 agttattaca ttttagcatc tagtgaagct tcttctaatc tatctcgttt tgacggcgtt
    23401 cgttacggat accgttctcc aaacgcaact actttagaag aactttatac aaaaactcgt
    23461 tctgaaggct ttggcgatga agtaaaacgt cgtattatgc ttggaacata tgcgttaagc
    23521 tctggttatt acgatgctta ctacaaaaaa gcgcaacaag cgcgtacgtt aattaagcaa
    23581 gactttgtta atgtatttga aaactatgat gttattatcg gacctagttc cccgacaaca
    23641 gcatttaaaa ttgacggaat gattaatgat ccaattacaa tgtattccaa tgatattttg
    23701 actgttccaa ttaacttagc aggcgtacca gctatttctg ttccttgtgg attctcggat
    23761 ggtttaccag ttggcttgca aattatcggt aactactttg aagaatcctt actttacaaa
    23821 gtagcgcatg cttttgaaca agaaacaaca ttccataaag aaaaaccaaa cttataggag
    23881 gcgtagcaat gaattttgaa acagttattg gacttgaggt tcacgtagag ttaaaaacca
    23941 attcaaaaat attttcttct gcgccagctc attttggagc agaaccaaat acaaatacaa
    24001 ccgtggtaga cttaggtatg ccaggtgttt taccagtttt aaataaacgt gcagtggaat
    24061 ttggtatgaa agcggctatg gcgattaact gtgaaattgc taaacataca aaattcgacc
    24121 gtaaaaacta tttttatcca gataatccga aagcatacca aatttctcaa ttcgataaac
    24181 caattggcga acatggctgg attgaaatcg aagttggcgg taaaaagaaa aaaattggca
    24241 tcactcgtct tcatttagaa gaagatgctg ggaaaaatac ccatacttct catggttatt
    24301 cgttagtgga tattaaccgt caaggaacac cacttatcga aatcgtttca gaaccagaca
    24361 ttcgttctgc agaagaagct tatgcctact tagaaaaatt aaaatctatc attcaataca
    24421 ctggcgtatc cgatgtgaaa atggaagaag gttcaatgcg ctgtgacgcc aatatttcta
    24481 tccgaccaat cggccaagaa gaatttggcg taaaaacaga acttaaaaac ctaaactcct
    24541 tcaacaacgt acgtaaaggt atcgaatatg aagaaaaacg ccaagctgaa gtgcttaagt
    24601 ctggcgggat tatcgatcaa gaaactcgtc gttttgaaga agcaactgga aaaacctctt
    24661 tgatgcgaat taaagaagga tccgacgatt atcgttattt cccagaacca gatttagtag
    24721 atttatttat tgatgacgct tggaaagaac gtattcgtgc agaaattcct gaacttccag
    24781 acaaacgtca aattcgttac attaacgatc ttggtttgcc agcatatgat gcaatggttc
    24841 tcacgcttac aaaagaaatg tctgactttt ttgaagcaac tcttgcagct ggagcagatg
    24901 cgaaacaagc atcaaactgg ctaatgggcg aagtttctgc ctacttaaac gcagaacaaa
    24961 aagaacttca tgaaacagga ctaactcctg aaaatcttgc tggcatgatt aaattaatcg
    25021 aagctggtac tatttcttct aaaatcgcta aaaaagtttt ccgcgaatta gcgcaaaatg
    25081 gtggcgatgc agagcaagta gtaaaagaca aaggacttgt ccaaatttcc gatgaaggag
    25141 ctttacgcac tatcattagc gaaattctag ataacaatga gcaatctatt gtcgacttca
    25201 aaaatggtaa ggatcgtgcg gttggattct tagttggcca agtaatgaaa gcaaccaaag
    25261 ggcaagcaaa cccaccaatg gttaataaat tattactaga agaaatgaac aaacgttaaa
    25321 caatgtagca gtgaggtatt ttgcctcgct gcttttatat ttattaggaa tttatagtta
    25381 aatttgctat aatattacta tcatgtgtca aaacgcgctt ttcttttgaa caacgctgtt
    25441 tgagtgaagg agaggacgaa cataatgcaa aaacacgctc gagttattta taatcccaca
    25501 tctggaagag aaatcatcaa gaaaaatctt gcagatgtcc tttcgatatt agagcaagca
    25561 ggctatgtaa catctgcgca cgcaacaact gcagaaccag atgatgccaa acatgctgcg
    25621 gaagaagctg taagagatcg attcgattta gttgtagcag ctggcggaga tggaaccatt
    25681 aatgaagtta ttaacggtat tgctgaaaaa gaatatcgcc ccaaagtagg gattatacca
    25741 accgggacaa ccaatgattt tgcaagagcc ttacatgtgc ctagagacgt gattaaagca
    25801 acgaagatta tagcagctgg tcaaagtgta gcaatggata taggtaaagc aaatgaaaca
    25861 tattttatta atataggtgg cggaggtcgt ttaacagaac tcacttacga tgttcctagc
    25921 cgtctaaaaa caatgctcgg tcaacttgct tattatttaa aaggtatcga aatgttacca
    25981 tccttaaaag caaccaaagt aaaagtagaa tatgatcaag gcgtatttga aggggaagtg
    26041 atgtttttcc tattaggatt aactaattcc attggtggct ttgaaaaaat cgccccagat
    26101 gccaagttag acgacggtaa attttcactt attatcgtga aaaaagtaaa tttagccgaa
    26161 tttatccgtt tagtcacact ggcgcttcga ggagatcata ttaaagaacc taatgttatt
    26221 tatgtaaaat ccgaaaaagt gattgttaac tcagaagata agatgttaat taaccttgac
    26281 ggggagcttg gtggggaaac gccaatggaa ttccgcaatt taagacaaca tatcgaattt
    26341 ttcgcaagtg tagatgacat ccccgcaact gatttattca taaaagaaaa tagctaaaaa
    26401 ctgcccagtt tggtagtttt tttctttagc ctaaacgtcc taattgcaac atagtaaaaa
    26461 ggatgtaatt attgttagaa atttgtctta tttgagcaaa acaagtataa taggtattct
    26521 gacaagaaat gaggtgaatg cgatatgaca agtggacatc aatttaaaag gttcacgatg
    26581 ataataatcg ttcttatcat tgctatcgca gcggctgttt ttttcttttg gcaagtggat
    26641 gcagaagaac aggctccaaa agtaagtaaa acagagctaa ttgaaagtaa taaagtatgg
    26701 ataaacaacc aaatgcaaat tccaatacaa gataatatta ttttatctat ccctgcagca
    26761 aatacaaaca caacgatagc aacaaatggg gatttgattt tagagacaac taatgaagaa
    26821 attttaaatg aattagcttc ttccgataat cgttataaag gtatcaaagc atatcgactt
    26881 cgtattgaag cgaagaaagt ttctgagtat attactaata caaaatatcg ttacccaaca
    26941 acaactatcc agaaaaaatt cgcaaactat gaaattacaa gtggtgaacg ttctgtacaa
    27001 acagaaaaaa cacctgtaaa aatagaagac acaacaaaca ataatattaa agtatctcta
    27061 aagacaagtt attcaagtga tgatgctgaa gtcgcagctg gtatttttaa tagccagatt
    27121 ccagaagaaa cgactattac agataacaca aaagcgttga ctacgaataa aaatgtcact
    27181 atctatccaa aaacatttat ttatgatttt acgttacaga aaaataccat gcttgttttt
    27241 aaagagcaag aagaagcagt aattaaagag ccaatcggca tcgaatatat tattaagtaa
    27301 agcaaagaga ggggcaaggg actttggaag catccctttt aaaaaagaac caatccattg
    27361 aacttactat tgaagattta acgcatgacg gcagtggggt tggcaaaatt gacggatacc
    27421 cacttttcat tccaaatacg ttacctggcg aaaaagtgac agctaaaata ataaagctca
    27481 ataaaaatta cggctttgct cggatggaga ctattgaatc ggttagtgca gaccgcgtag
    27541 aacctccatg tgcggtttat tccaaatgtg gcggttgtag cttgcaacac ttaagctacg
    27601 agggtcagct tgcgtttaag cgaaatcaag tggaagaaac gatgaagcga attgggaaac
    27661 ttaatgtaga tgttccagaa acgttaggca tggaaaaccc gtggcgctac cggaataaat
    27721 cacaagtacc agtaggattt gttaatggta agttaacagc aggtttttac caaaaaagaa
    27781 gccatgccat tatcgatatg tccacttgtt taattcacaa tgagcaaggc gattttgctg
    27841 ttcaaaaaac acgtgaaatc ctagctaaat acggaacaga accgtatgat gaacaaacag
    27901 gaaaaggcga tatccgccat attatgacaa gatttgcgca tacaactgga cagttaatga
    27961 ttgtccttgt aacaacaaaa gaacgtatgc catttaaaga agaaatcgta cgggaattgg
    28021 tcgaacaact tgaactaact tctatcgttc aaaatattaa cccacataaa acaaatgtga
    28081 tttttggaga tcgtacgaaa acactttggg gaaaagatat cattgaggat acgattcatg
    28141 gtattcgatt tgcaatttcg gctcgttcat tttatcaagt aaacccaatc caaacagaag
    28201 ttttgtatca acaagcaatc gatgcggctg agttaacagg agaagaaaca gtgattgacg
    28261 cctattgcgg cattggttct atttctcttt gtctcgcgaa aaaagccaag catgtctacg
    28321 gggtagaaat tgtggatcaa gcgatacaag atgctcgtgc aaatgcagaa ctcaatgaat
    28381 tagcgaatac tacttttgag acagggaaag cagaagaggt tattccggcg tggtacaaag
    28441 ctggaattgt agcagacgtc ttagttgtcg atccaccacg aaaagggtgc gatgaaaaat
    28501 tactggaaac aattttagca atgaaaccaa aaaaagtagt atatgtttct tgtaatccag
    28561 ggacattggc ccgtgatatg aaaatcttaa cggatggcgg ctatgtagcg aaaaaagttc
    28621 agcctgtaga tatgtttcca atgacaacac atatagaagc tgtgactgtt ctacatttaa
    28681 attaagtata caaaaaccgc cataatggga taaatggcgg tttttgcttt tcgagtgtgt
    28741 ggttgactaa taaattaaca gacgagatta ataaaaacca agtccagttt tatttaacca
    28801 cgaaataaat aaatggtcaa aagagcaaaa attaactttt atgagaatag aaccaattta
    28861 attaactaat tttatcttat atagttaatt aaaacacaat aaaagcgaaa atcatcctta
    28921 aaattgtcat gaaattgtca cctttttttc ttctttcaaa aaggtagata gtctggtaag
    28981 atgaatgtat gagatttcac atgaatggag gaaatgagaa tggcaattac tatgtatatc
    29041 gaccagcctg gtgcctcgtt aaattatgag acaacacatc cacatttcaa ggaacatttt
    29101 aaagcgagtt tttatttgga tggtcaggat agctatggtc catttgggta taaagatgga
    29161 cttgaagtac ttcgacgttt agaagaatat tttagtgata aaagtgatca aggactcaat
    29221 ttatcgtctt ttccaaaata catgatggaa acagtgaaaa aagcaaacta tgttccagcg
    29281 aaagacgatg gtgtagaacg attgaaacaa cttttggctg agtttggcag tgacgtacgt
    29341 gcatctgata gaattactgt ctcagcagct ttagctcaaa tcaaaatcac gggctatatt
    29401 ttacctgctc ttcgtgatgc ggcgctggaa tcacttcatc gcgaaataga attgaacaaa
    29461 atagaaaata ttgatgcagg ttatgcggac agtatgtttt atgacttatt aacctttaca
    29521 aaagactata catctgtgtt accagatatg tggtgcagac attgtacaga ataaaaaaac
    29581 aacgctaaaa ttagcgttgt ttttttactt atctaacatg gttaaaatag ctcgagcaac
    29641 ttcttcttga ttacgattat ccgtattaac gataaagtct gcagaatctt gatagtgagc
    29701 aattctaggt tcaaaaatag cgcgaatttc ttcggctgtt ttttgttgta caagcggacg
    29761 tgtagtgtcg ccttttaagc gattcataaa tacttcggga tccgtttcta aataaataac
    29821 cggatatgta ttttttaaaa cttctctatt ttcaggattg agaacaatgc caccgcctgt
    29881 tgctataacg gctttggttg ttgctaattc ttttaatttt tcatgttcta gacggcggaa
    29941 ttctttttca ccatatttag caaaaatgtc cgatacactc attccttgtt cgcttgtaat
    30001 tacttcgtca atatcgatgt acggtaagtc agctaagttt gcgagtatat ttccaaccgt
    30061 tgtttttcca gctcccatga agcctattaa gataacttga tcgatgatgt tctcctcctt
    30121 tattggatta ttacatttta ctacttaaaa gcattaaaga aattatatca caaatgccaa
    30181 aaaggtcaac tgaaagtagg ctgatttctt taaaataaaa agctacatga atgccttctt
    30241 cccattgtag tatattttta gtacaataga aataatagag ctgtaaaact ggaggaaaat
    30301 aatgatagaa aatgagctag aacatgcaaa gaaaatggag aaaatcgaat ttggggtcaa
    30361 tcgacgtttg attttttcaa gttgtttact ttggatggct gttggattat tactttatgt
    30421 tgtttttagt catatcaaag gtgtaaatgg catagaggaa atgattttac tcgtatttat
    30481 cggcctttgt gtgttacgtc cattgtttcg gttaattaat atcgctccca ccgtagaatt
    30541 aacagaacgt ggagttgctt atcgtggtga ttttaaatca tggaatgaaa ttaaaaaaac
    30601 agaactgaaa aaaccagcaa tgatgctttt ttcgcaaggt agattaaaaa ttatgacatc
    30661 gataaatggg cgggaagaag tggcatggga catagttgct gcggatgttt ctattagttt
    30721 ggaggaacta gaaaaactca ttcagtcgat gcgttccact tatacaaatg atgaaactat
    30781 cggtatggaa atctttgtgg aaaagaaata ataaggaaaa tcatttatct gtttttttga
    30841 cggat
//
LOCUS       DASDYO010000016        30338 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.016, whole genome shotgun sequence.
ACCESSION   DASDYO010000016 DASDYO010000000
VERSION     DASDYO010000016.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 30338)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30338)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30338
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.016"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            109..1995
                     /gene="oatA"
                     /locus_tag="U0290_000666"
     CDS             109..1995
                     /gene="oatA"
                     /locus_tag="U0290_000666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan O-acetyltransferase OatA"
                     /protein_id="HEM2300716.1"
                     /translation="MKRTTRYSRKYVPSIDGLRALAVIAVIAYHLNFSWAKGGFIGVD
                     IFFVLSGYLITNILLTQWEKNQSLQLKQFWIRRFRRLIPAVYVMIVVVVIYAVFFHPE
                     ILKNLRGDAIASFFYVSNWWFIFHNVSYFDSFGLPSPLKNLWSLAIEEQFYLIWPAFL
                     LVFLKWVKNPKLLLKIVIGLGLLSAVWMTILYVPGTDPSRVYYGTDTRAFDLLAGCAL
                     AFVWPFNRLSPVVPRKSKSVLNIAGTISILCFILFTAFVSEYQPFLYRGGLLFVAILG
                     VIMIATISHPASYLSKIFSFKPLRWIGTRSYGIYLWHYPIITLTTPVLEITQPNIWRA
                     ILQVAATFIIAELSFRFIETPIRKNGFINYFKGFKDKNYFIWKNKPVGKWLSIAGVVA
                     VLAIFTLGMSNVLSVNTNAEKQQTSVKTTTSTPDEKKDDKKDKEDKATKEKEDSKETD
                     ANKANGQNQTQVPDNKNKTAATPKTMITQTVAIGDSVMLDIEPYLKEAVPNITIDGLV
                     GRQLRDAITTATGYKKFNSENSSVILELGTNGPFTEEQLNDLLDQFDKATIYLVNTRV
                     PRGWQSDVNKSIANASSRPNVTVVDWYSRSSGQSQYFAPDGVHLTKSGAQAYVAMLTS
                     VMNK"
     gene            complement(2028..3848)
                     /gene="inlK"
                     /locus_tag="U0290_000667"
     CDS             complement(2028..3848)
                     /gene="inlK"
                     /locus_tag="U0290_000667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 internalin InlK"
                     /protein_id="HEM2300717.1"
                     /translation="MSVKSNIVKIGVCFAVLAVPVSQTTFPVFAAEQTGLKASQDNVY
                     IPDSTFKAYLNGLLGQSSTANITEAQMNSLTYITLANINVTDLTGIEYAHNIKDLTIN
                     NIHATNYNPISGLSNLERLRIMGKDVTSDKIPNLSGLTSLTLLDISHSAHDDSILTKI
                     NTLPKVNSIDLSYNGAITDIMPLKTLPELKSLNIQFDGVHDYRGIEDFPKLNQLYAFS
                     QTIGGKKLINSDIKGSALTYNAEKQTLYVPFSLMTERTVNYDGYVPDFVKSTAGSDTY
                     FAMNEKQVNGNRLTITSDGLTVSDVSKADFDNLEKMEYNAKIDLSSQTYNIPDQFKNG
                     GAYNISVPIYDHYFTVDHSVNISADSGKTYIENQPVTEAEFLADIHAKTDDGSTVTSD
                     FADKVDFKTPGTYTVTLQSENNSGLKAAPVQVNVTIKEKTAITADEKITYKVDTSKTE
                     AEFLADIKAKTNDGTAITSDFATVVDLSKPGKYVVTLNAENDLQKALPVQVTVIVEKE
                     TPIPDPTPNPTPDPTPNPTPTPDPTPDPSPTPNPVIKPNVNKPEVPSHKIPSLTVNEK
                     KAKAETSKEALPKTGDSLPVAGATVGFLLISLSWFVSRKK"
     gene            complement(4476..4943)
                     /locus_tag="U0290_000668"
     CDS             complement(4476..4943)
                     /locus_tag="U0290_000668"
                     /EC_number="4.4.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-ribosylhomocysteine lyase"
                     /protein_id="HEM2300718.1"
                     /translation="MAEKMNVESFNLDHTKVKAPFVRLAGTKVGVHGDEIYKYDVRFK
                     QPNKEHMEMPALHSLEHLMAELARNHTDKLVDISPMGCQTGFYVSFINHSDYDDALEI
                     IATTLTDVLAATEVPACNEVQCGWAASHSLEGAKALAAEFLDKRDEWKNVFGE"
     gene            complement(5027..7486)
                     /gene="parC"
                     /locus_tag="U0290_000669"
     CDS             complement(5027..7486)
                     /gene="parC"
                     /locus_tag="U0290_000669"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit A"
                     /protein_id="HEM2300719.1"
                     /translation="MSNPEQHIQDLALEEVMGDRFGRYSKYIIQERALPDVRDGLKPV
                     QRRILFAMNVEGNTAEKGFRKSAKTVGNVIGNYHPHGDSSVYEAMVRMSQDWKVRNML
                     IEMHGNNGSVDGDPPAAMRYTEARLSPISAELLRDIEKETVDFIPNFDDTSSEPTVLP
                     ARFPNLLVNGSTGISAGYATDIPPHNLTEIIEAVIKRLDNPLSTTDDIMKIVKGPDFP
                     TGGIIQGIDGIRKAYQTGKGRVVVRSKTEIEDIRGGRKQITIHEIPYEVNKANLVKRM
                     DELRIEKKIEGISEVRDETDRTGLRIAVELKKDANAEGVLNYLFKNTDLQVSYNFNMV
                     AINKKRPELMGIIPMLDAYIEHQKEIITKRSEYDIRKARARQHILEGLIKALSILDEV
                     IKLIRGSKDKRDAKLNLQTKYDFSEKQAEAIVSLQLYRLTNTDIHELQSEAKSLAEQI
                     SVLEKILGDEAELIAVLKEELAEIKKKYKTARRTEVQAEITEIKIDTEVLVANEDVIV
                     SVTKEGYVKRTSQRSYAASNGAELAMKEADHAIFIQKMNSLDSLLLFTSKGNFIYRPV
                     HELPDIRWKNLGDHVSHLASDLSAGEEIRSAIAIQAFTEEKRFLFVTKNGMTKQSAIT
                     NYKPQRYSKSMMAIKLKGDDELLNVHLIDGTEDIFLATKNGYGLRYSITEIPESGART
                     AGVKAINLKQDDIVIGGIVLMPNEQKHILLATQRGSLKQMKASEFEPISRAKRGLLML
                     RELKSNPHRFIGITLADNNDHLFIETNTDQIVEIDVANLRITDRYSNGSFVLDETMEG
                     EPTSIWLAIPEIKDTSDAKDE"
     gene            complement(7483..9450)
                     /gene="parE"
                     /locus_tag="U0290_000670"
     CDS             complement(7483..9450)
                     /gene="parE"
                     /locus_tag="U0290_000670"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase IV subunit B"
                     /protein_id="HEM2300720.1"
                     /translation="MNRNEYNDDSIQVLEGLEAVRKRPAMYIGSTDVRGLHHLVYEIV
                     DNSVDETLAGFGKKIVVTLHVDGSVSVSDEGRGMPVGMHKTGKSTVEVILTVLHAGGK
                     FGQEGGYKTSGGLHGVGSSVVNALSEWLVVTINRDGATYQQKFKDGGKPDGTLKKIGK
                     SKATGTTIRFKPDPAIFPTTSFNYETLSERLRESAFLLKGMLIELIDERVGMAEAFHF
                     EEGVKNFVEYINEGKDVLHPVASFEGENATIEVEMAFQFNDGYSENILSFVNNVRTRG
                     AGSHESGMKAAMTRIFNDYARRVNLLKEKDKNLEGSDIREGLSAVLSIRVPEKILQFE
                     GQTKEKLGTQEARQAVDAVVAEHLAYFLAENPETSSLLVKKAVKAREAREAARKAREE
                     TRNGKKKKRSETLLSGKLTPAQSRNPNKNELYLVEGDSAGGSAKQGRDRRFQAILPLR
                     GKVINTEKAKLQDILKNEEISTIIHTVGAGVGTEFDVEDCNYDKVVIMTDADTDGAHI
                     QVLLLTFFYRYMRPLVEAGKVFIALPPLYKVSRGSGKKEVIEYAWTDEELDSAIQKIG
                     KGYMIQRYKGLGEMNADQLWETTMNPDTRTLIRVRVDDSARAERRVATLMGDKVEPRR
                     QWIEKHVEFSMEDSQNILENENMMVEEAKDI"
     gene            complement(9631..10038)
                     /locus_tag="U0290_000671"
     CDS             complement(9631..10038)
                     /locus_tag="U0290_000671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-binding protein"
                     /protein_id="HEM2300721.1"
                     /translation="MQNPTKEEIQQILKKAKVIAVIGLSDKPDRTSYRVSQIMQQAGY
                     KIIPVNPNADEILGEKAVKRLTDIKEHVDIVNVFRRSEFLPEIAEAFDQIDADVFWAQ
                     LGIANQEAFDFLTEKGYPTVMDYCIKVAYQEMD"
     gene            10196..10792
                     /gene="plsY"
                     /locus_tag="U0290_000672"
     CDS             10196..10792
                     /gene="plsY"
                     /locus_tag="U0290_000672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate 1-O-acyltransferase PlsY"
                     /protein_id="HEM2300722.1"
                     /translation="MTINLILLSLLAYVIGSIPSGLWIGKIFYKKDIRDFGSGNLGAT
                     NSFRVLGIKAGSIVTVMDILKGTVATLLPFFFQLNVDHHFWLLTGAFAIIGHSFPLFA
                     GFRGGKAVATSAGVILAYAPLLFVAALVVFLVTLKLSKYVSLSSMIGALAALIISLFM
                     GDWILIILVACIALFVIWRHRANITRIRNGEEPKIKWM"
     gene            complement(10834..11706)
                     /locus_tag="U0290_000673"
     CDS             complement(10834..11706)
                     /locus_tag="U0290_000673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldose 1-epimerase family protein"
                     /protein_id="HEM2300723.1"
                     /translation="MIKLENEVLLVEMKTAGAELTRIFHKDTGLEYLWNADSKFWGRH
                     SPVLFPTVGRLVEDTYLVDGKPYHLGQHGFARDRDFQVIEQTEKSVRFELDADEDSLA
                     VYPYKFKLSIIYTIEKNTVAVSYEVENTDNKRIYFSIGAHPAFNLPLTDGTTFEDYYL
                     DFGTEENLETLCLEGPYRSGEIKKVVDKPAQYLPLSYDLFKNDALIFEALKQKEMTIK
                     SDKTPHFVKVSFPEFPFVGVWTAKPGTPFLCIEPWYGIADGAGESVELRDKAGIEHLE
                     PEAVFASEYEITVG"
     gene            complement(11709..12020)
                     /locus_tag="U0290_000674"
     CDS             complement(11709..12020)
                     /locus_tag="U0290_000674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300724.1"
                     /translation="MAFGVKRDEMELWKEKAARGEIAIITHYWLDDRFPESKTVTKVA
                     CVDLKKLQQWGKQYGLAPDWIDNRRKNFPHYDLFGEMQLVVLKKEKAFEQIERFHLEE
                     K"
     gene            complement(12043..12462)
                     /locus_tag="U0290_000675"
     CDS             complement(12043..12462)
                     /locus_tag="U0290_000675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEM2300725.1"
                     /translation="MEIAETTIEVRYAETDQMGVVYHNNYLVWMEIGRTRLIEKLGFR
                     YFDMEEAGYLSPVLDVHIHYVKPLRYGQKAVVKTWIKGYDGLRVTYGYEICYEDTNEV
                     AITGETQHVCVTKEDFRPVSLRRTFPNWHEAYLKALE"
     gene            complement(12566..13345)
                     /gene="codY"
                     /locus_tag="U0290_000676"
     CDS             complement(12566..13345)
                     /gene="codY"
                     /locus_tag="U0290_000676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP-sensing pleiotropic transcriptional
                     regulator CodY"
                     /protein_id="HEM2300726.1"
                     /translation="MTLLEKTRKINAMLQNAAGKTVNFKEMADTLTDVIEANTYIVSR
                     KGKLLGYSEALPIENDRMKQMLTERQFPEEYTQSLFNVGETSSNLEVSSQYTAFPIEN
                     SELFTKGLTTIVPIVGGGERLGTLILSRLESNFTDDDLLLAEYGGTVVGMEILHEKAE
                     EIEEEARSRAVVQMAISSLSYSELEAIEHIFDELNGKEGLLVASKIADRVGITRSVIV
                     NALRKLESAGVIDSRSLGMKGTFIRVLNDKFLVELEKLKNN"
     gene            complement(13366..14775)
                     /gene="hslU"
                     /locus_tag="U0290_000677"
     CDS             complement(13366..14775)
                     /gene="hslU"
                     /locus_tag="U0290_000677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATPase subunit HslU"
                     /protein_id="HEM2300727.1"
                     /translation="MTNITLMNQLTPKQIVEKLDQYIIGQTGAKKSVAVALRNRYRRQ
                     LMDESIRDEIIPKNILMIGPTGVGKTEIARRIAKIVRAPFSKVEATKFTEVGYVGRDV
                     ESMVRDLVEVSVRLVKEEKMQLVRVKAEKNAEKRLIKLLAPSQKKKQTTSQNPLEALF
                     GGMNQPDESPEEEVDQELKNKRSQIEWRLQNGELDDEIVTVEVKEQQNPMLDMMRGAG
                     MDQMNGMQDALSGMFPAKKKKRKVTVREAKKILFEDEASKLIDADELAAEGIHRAEQM
                     GMIFIDEIDKIASKEGGGNAQVSREGVQRDILPIVEGSQISTKYGTVNTEYILFIAAG
                     AFHMSKPSDLIPELQGRFPIRIELDKLTQEDFYKILTEPDNALIKQYKALLKTEGIDL
                     IFTKEAVERIAEIAFQVNQDSDNIGARRLHTILEKLLEDLLFEAPEINMESIKVTENY
                     VNEKLAPIMQNKDLTQFIL"
     gene            complement(14789..15328)
                     /gene="hslV"
                     /locus_tag="U0290_000678"
     CDS             complement(14789..15328)
                     /gene="hslV"
                     /locus_tag="U0290_000678"
                     /EC_number="3.4.25.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease subunit HslV"
                     /protein_id="HEM2300728.1"
                     /translation="MELHATTIFAVQHDGKAAMAGDGQVTLGESVVMKHTAKKVRRLF
                     HDKVIAGFAGSVADAFTLFEKFEAKLNEYNGNLERASVELAQQWRSDSVLRKLEAMLI
                     VMDKDTLLLVSGTGEVIEPDDGILAIGSGGNYALAAGRALKRHNGGQMEAKDIARHAL
                     EIASEICVFTNDHITVEEL"
     gene            complement(15349..16251)
                     /gene="xerC"
                     /locus_tag="U0290_000679"
     CDS             complement(15349..16251)
                     /gene="xerC"
                     /locus_tag="U0290_000679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine recombinase XerC"
                     /protein_id="HEM2300729.1"
                     /translation="MIQEGKLEQQFFDYLHSERNYSVNTSTAYENDLLDFRRFLNEQS
                     ITTYQQVTFLDVRIYLTELKQKSFSRTTVARKISSLRSFYTFLLRENVINENPFTYVS
                     HAKNQLRLPKFFYSEEMEALFQVVYEDNETLTLRDRVLLEVLYGTGIRVSECAGILLP
                     DLDTSYQAILIRGKGNKERYVPFGVYAEDAITDYLPERANLMSRYKKSHDALLVNHYG
                     DPLTTRGIRYCLSKIISKASLTRKIHPHMLRHTFATDLLNNGADMRTVQELLGHASLS
                     STQIYTHVTKEHLKSTYMKHHPRA"
     gene            complement(16534..17838)
                     /gene="trmFO"
                     /locus_tag="U0290_000680"
     CDS             complement(16534..17838)
                     /gene="trmFO"
                     /locus_tag="U0290_000680"
                     /EC_number="2.1.1.74"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464801.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FADH(2)-oxidizing
                     methylenetetrahydrofolate--tRNA-(uracil(54)-C(5))-
                     methyltransferase TrmFO"
                     /protein_id="HEM2300730.1"
                     /translation="MEKSVNVIGAGLAGSEAAWQLVKRGVKVDLYEMRPVKQTPAHHT
                     DKFAELVCTNSLRANGLTNAVGVIKEEMRILDSIIIEAADKASVPAGGALAVDRHEFS
                     GYITDKVKNHPLVTVHTEEVTTIPEGPTIIATGPLTSPALADEIKQLTGEEYLYFYDA
                     AAPIIEKDSIDMDKVYLKSRYDKGEAAYLNCPMSEEEFNAFYEALVTAETAALKEFEK
                     EVFFEGCMPIEVMAKRGIKTMLFGPLKPVGLEDPKTGKRPYAVLQLRQDDAAGTLYNM
                     VGFQTHLKWGEQKRVFGMIPGLENAEIVRYGVMHRNTFINSPTVLEPTYQLKTRNDLF
                     FAGQMTGVEGYVESAASGLAAGINAANFVEEKELVVFPAETAIGSLAHYITSASKKSF
                     QPMNVNFGLFPELETKIRAKQERNEKLAERALNAIKRVAEQL"
     gene            complement(17901..19979)
                     /gene="topA"
                     /locus_tag="U0290_000681"
     CDS             complement(17901..19979)
                     /gene="topA"
                     /locus_tag="U0290_000681"
                     /EC_number="5.6.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I DNA topoisomerase"
                     /protein_id="HEM2300731.1"
                     /translation="MADYLVIVESPAKAKTIEKYLGKKFKVKASMGHVRDLPKSQMGV
                     DTEHDYEPRYITIRGKGPVLKELKQAAKKAKKVYLAADPDREGEAIAWHLANSLELDQ
                     SDKLRVVFNEITKEAVKESFKTPRKIDMDLVNAQQARRILDRLVGYNISPILWKKVKK
                     GLSAGRVQSIALRIIIDREKEINNFKPEEYWTIDGNFLKGKKKFQANFYGVNGKKKKL
                     STADDVKEVMSAIKGKSFDVTDVTKKERLRNPAAPFTTSSLQQEAARKLNYRTRKTMM
                     LAQQLYEGITLGKQGTVGLITYMRTDSTRIADSAILEASNYIKETYGPEFSRNHKRSD
                     KNAKGAQDAHEAIRPTSAMRSPQEVKEFLTRDQLRLYRLIWERFIASQMTPAVLDTMR
                     VDLDNNGVNFRANGSKIKFHGFMKVYVESNDDNTEEKENILPDLKKGDKVQSESLEQR
                     QHFTQPPPRYTEARLVKTLEEIGIGRPSTYSPTLDTIQRRNYVSLTNKRFIPTELGEI
                     VNEMIEEYFPEILDVKFTANMESELDEVEHGEVEWVKVIDEFYKRFEPNVIKADAEME
                     KIEIKDEPAGIDCDLCGAPMVYKMGKYGKFLACSRFPDCRNTKAIVKEIGVTCPKCEK
                     GHVIERKSKKKRIFYGCDRYPDCDYVSWDKPVERACPKCEKRALVEKKLKKGVQVQCT
                     NCDYKESTQQ"
     gene            complement(20252..21112)
                     /gene="dprA"
                     /locus_tag="U0290_000682"
     CDS             complement(20252..21112)
                     /gene="dprA"
                     /locus_tag="U0290_000682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-protecting protein DprA"
                     /protein_id="HEM2300732.1"
                     /translation="MDFKQRHTWLKIASCKSISAKKRASIWQKLTEFDQYEMTTQTFA
                     ESFFPVDKLAQILMELETAEACFFDDVTLIWILDDAYPALLREIYEAPPILFCKGNID
                     LLQQQAIAIVGTRQMSEYGRKACMKIASELAENKLTIVSGMAIGIDSTAHRATLNKQG
                     TTIAVLGSGVNKVYPKKNELLAKEIVKEGLLLSEYLPDEEAKRWHFPERNRIISGLAI
                     GTVIIEAAERSGSLITADIALEQNRQVFAVPGNIFIDTWQGTNYLIQEGAKLVMNSNN
                     IIEEFIQIKP"
     gene            complement(21246..22031)
                     /locus_tag="U0290_000683"
     CDS             complement(21246..22031)
                     /locus_tag="U0290_000683"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HII"
                     /protein_id="HEM2300733.1"
                     /translation="MSDSISVIREKLNQVTSEHDPFFRKCMQDERKGVEKLLETTRRK
                     WEKEAQLRNKLEEMKQYETDLFQQGYKYIAGVDEVGRGPLAGPVVAAAVILPADFSVV
                     GINDSKQLSEAKRDALFETIKKEAIAIGVGIIEHDVIDQVNIYEATKLAMREALDQLT
                     PEPDFVLIDAMPLRYTEAELSLIKGDTKSISIAAASIIAKVTRDRLMQMYDEKYPGYD
                     FANNMGYGTKKHLLGLDTIGICPIHRISFAPVKEAKLHFDSLK"
     gene            complement(22028..22891)
                     /gene="ylqF"
                     /locus_tag="U0290_000684"
     CDS             complement(22028..22891)
                     /gene="ylqF"
                     /locus_tag="U0290_000684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YlqF"
                     /protein_id="HEM2300734.1"
                     /translation="MTIQWFPGHMAKARREVTEKLKLVDVIFELVDARIPLSSSNPML
                     EEIIHQKRRVIILNKADTADEKTTKEWIDYFAEKGLPAVAVNAQEGKGLFKIEQAAEK
                     LMAEKFDRLRSKGMKPRAIRAMILGIPNVGKSTLINRLAKKNIARTGNKPGVTKAQQW
                     IKVGKTLELLDTPGILWPKFEDQEIGYKLALTGAIKDDLLQMEEIAGYGLRFLEKHYP
                     DRLQNWLKVETVSEDPIETLAFIAEKRGLLDRYNDPDYSRAAETVVREIRQQKLGRMS
                     FDFPNWEDEVE"
     gene            complement(22901..23443)
                     /gene="sipZ"
                     /locus_tag="U0290_000685"
     CDS             complement(22901..23443)
                     /gene="sipZ"
                     /locus_tag="U0290_000685"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I signal peptidase SipZ"
                     /protein_id="HEM2300735.1"
                     /translation="MKEKNLKRLWSWIWAAVLAVLIAVIIRFYLFVPILVDGISMMPT
                     LHSDDRVIINRFGNVDRFDVIVFRESDGKEYIKRVIGLPGDTVEYKEDQLYINGKKYN
                     EPYLDTYKEKLKDGYLTDDYSSKDQLDGGKIPKDTYFVLGDNRRASKDSRIIGPIPFS
                     KVLGTTPICYWPIEDAKLID"
     gene            complement(23545..24114)
                     /gene="sipY"
                     /locus_tag="U0290_000686"
     CDS             complement(23545..24114)
                     /gene="sipY"
                     /locus_tag="U0290_000686"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I signal peptidase SipY"
                     /protein_id="HEM2300736.1"
                     /translation="MTDQYDKKPKKKSGAHQLLSWVLVIVAALAIALVIRNFVVAPVK
                     VEGTSMVPTYQDGDRIFIEKISKPDRFDIIVFDEPPMIGSGEHFIKRVIGLPGDKIAF
                     KNGELYLNGKRKVENYLPEGTLTLWNPDPTQKPYIADYTLEDMTGESTVPKGKLFVLG
                     DNRGGSSDSRVFGFIDDSMVNGTVIQFGK"
     gene            complement(24149..24715)
                     /gene="sipX"
                     /locus_tag="U0290_000687"
     CDS             complement(24149..24715)
                     /gene="sipX"
                     /locus_tag="U0290_000687"
                     /EC_number="3.4.21.89"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I signal peptidase SipX"
                     /protein_id="HEM2300737.1"
                     /translation="MKSENKFFSGAFGWIKIILIALILAFGIRYFLISPVTVNGKSMD
                     PTLHDGEHLFINKVSDPKRFDIIVFPAPDEENAEYIKRVIGLPGDKVEYKEDQLYING
                     KKYDEPYLDSEKEALKNGYLTTDAEGDPNFTMADIPNSDGSLTVPKGELFVLGDNRQV
                     SKDSRYIGFISQDTVLGKVISFGKSLER"
     gene            complement(24834..26093)
                     /gene="clpX"
                     /locus_tag="U0290_000688"
     CDS             complement(24834..26093)
                     /gene="clpX"
                     /locus_tag="U0290_000688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent protease ATP-binding subunit ClpX"
                     /protein_id="HEM2300738.1"
                     /translation="MFKFNDEKGQLKCSFCGKTQDQVRKLVAGPGVYICDECIELCNE
                     IIEEELGISEFVDFGEVPKPQEIRHILSDYVIGQERAKKALAVAVYNHYKRINSNETK
                     EDEVELSKSNICLIGPTGSGKTLLAQTLARILNVPFAIADATSLTEAGYVGEDVENIL
                     LKLIQSADYDVEKAEKGIIYIDEIDKVARKSENPSITRDVSGEGVQQALLKILEGTVA
                     SVPPQGGRKHPHQELIQIDTGNILFIVGGAFDGIEQIVKNRMGEKVIGFGTDNAKLKD
                     DETYLSRVVPEDLLKFGLIPEFIGRLPVIATLEQLDEAALVSILTEPKNALVKQYKRM
                     LELDDVELEFEPTALIEIAKEAIERKTGARGLRSIIEQIMLEVMFEIPSRDDITKCII
                     TEKAARGEEEPQLQLEDGSIIPIKTSA"
     gene            complement(26278..27561)
                     /locus_tag="U0290_000689"
     CDS             complement(26278..27561)
                     /locus_tag="U0290_000689"
                     /EC_number="5.2.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trigger factor"
                     /protein_id="HEM2300739.1"
                     /translation="MSVKWEKQEGNVGKLTFEIEQEKVKEGLDRAFVKVRKTLNVPGF
                     RKGKVPRQIFNQRFGEEALFQDALDILLPEVYSAAIDEAGIDPVDTPQVNIESMEKGE
                     TWVLTAEVTVKPEVKLGDYKGLEVEKRETELTTEELEAELKQLQERQAELVVKEDAPA
                     ENGDTVILDFEGFKDGVAFEGGQAENHSLELGSGQFIPGFEEKLVGLKAGDEADIELT
                     FPEEYHAEDLAGQPVVFKVKLHEIKTKEVPALDDELAKDIDEEVETLDELKEKISKRL
                     QEAKEESVAQAKQEEVIAKAVENAEVDIPHAMVHHEADHLMNHFAQDLQAQGLTPELY
                     YQFTGQTEEAMHAQMEKDAEKRVKMNLVLEAIAEAENIEPTEEAIDEEISTLAEKYGM
                     EKDAVRAALGDMSELKSDLKIRKAIDVLLDSAVEK"
     gene            complement(27676..28614)
                     /locus_tag="U0290_000690"
     CDS             complement(27676..28614)
                     /locus_tag="U0290_000690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464791.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300740.1"
                     /translation="MSGSGAFFPMSVKKFLEKGITSLSEEEKMSTLHYLENAYHQEPC
                     NEEIVHRLIQFYNQTDKTKKAQEIGQNFLTMNGYDKEILGELSVTFMKEDNMDTYFTL
                     VRHYMEEEKKEATEEIADNVIPFPKQFVPRRDIREFASWHTTEQLEFLQEARFLEIDS
                     FLPAFKAFLADDSFSPFVQSMIFELMQEKEINEDITVQKIDKHGIFNPSLVPMLADNK
                     FAEAIFAGLAEMLEHSNPSLLEQVIGIIQQHLFMLYPFELEPQEVDVWINAYYKWANA
                     MYGNYCVISDDVNHLAVEEAISIIEELEIRQQNYFI"
     gene            complement(28876..29541)
                     /locus_tag="U0290_000691"
     CDS             complement(28876..29541)
                     /locus_tag="U0290_000691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300741.1"
                     /translation="MKKRITMILGLVCLSTLTACSNSENVKEKTSEEPATAQNGAETI
                     KAHNGVVSYHGKYLKLAENMDTLEKDAPIIIKATKKSEKTTVTKETKENVFPTDFYTM
                     SDVQINSIEKDTTGKLSESMTIKVLEYSVENVLVEGKEYDLTIDGYKNMEKGEEYTLF
                     LEKNPDGENYILSNAVISKFPVEELPEEELFLDGGQTTEETDSIEEIYQEVYQEVLEE
                     FGE"
     gene            complement(29557..30090)
                     /locus_tag="U0290_000692"
     CDS             complement(29557..30090)
                     /locus_tag="U0290_000692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="matrixin family metalloprotease"
                     /protein_id="HEM2300742.1"
                     /translation="MRKKTLAVFLVFTVLVALLAPTNASAYTKLGYVMTKASAKNFKI
                     YINGSAKGFKNIIISGAKAWNPSPYLNTVSIGNDVKPNFTVSSSGTNKGSVLAVCNTT
                     YYKSNKLISKNEITLYKGFRSLSTNHKIETIVHEFGHGFGLGHVKTKNAIMLDKGFIN
                     KTKPQTDDFNGIKALYK"
     gene            complement(30214..>30338)
                     /locus_tag="U0290_000693"
     CDS             complement(30214..>30338)
                     /locus_tag="U0290_000693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
                     /protein_id="HEM2300743.1"
                     /translation="VFVKYTSGYSNIEKGTVRLSHKNAVILSEILMCDLKFFYE"
BASE COUNT         8369 a         6251 c         4967 g        10751 t
ORIGIN      
        1 cttgatttat gtgtggtatt atagtatgga gctaaaaaca gatctcttta ctatctctgt
       61 ctaggtttac acacacatat ttacttatca caaataggag atgttatttt gaaaaggact
      121 actcgctaca gtagaaaata tgttccgagt attgatggac ttcgagcact cgcagttatt
      181 gctgtaatcg cctaccactt gaattttagc tgggctaaag gtggattcat cggcgtagac
      241 atatttttcg tcttatctgg ttacttaatt acaaatattt tattaacaca atgggaaaaa
      301 aatcaatcac ttcaattaaa gcaattttgg attagacgtt ttcggcgact cattcctgct
      361 gtttatgtaa tgattgtagt cgttgtcatc tatgccgtct tcttccatcc agaaatttta
      421 aaaaacttac gcggcgatgc aattgcttct ttcttttatg taagtaactg gtggtttatt
      481 ttccacaatg tttcttattt tgattcattt ggacttccat caccacttaa aaacttatgg
      541 tcactagcca ttgaagaaca attttattta atatggcccg cttttttact ggtatttctc
      601 aaatgggtaa aaaatccaaa actattatta aaaatcgtca ttggccttgg ccttctctcc
      661 gcagtttgga tgacgatttt gtacgttcct gggacagatc caagtcgtgt ttattacggt
      721 acggatacga gagcatttga tttgctagca ggttgtgcac ttgcatttgt ctggcctttc
      781 aatcgcctta gtcctgtagt tccaaggaaa agtaagtcag ttctcaatat tgcaggaaca
      841 atcagtattt tatgttttat tctattcaca gcttttgtaa gtgaatatca acctttctta
      901 tatcgcggtg gcttgttatt cgttgcaatt ctcggcgtta tcatgattgc aactatctca
      961 catcccgcct cttatctaag caagattttc agttttaaac cacttagatg gattggaaca
     1021 aggtcttacg gtatttactt atggcattat ccaattataa cgttgacaac acctgtacta
     1081 gaaattactc aacctaatat atggcgagct atcctacaag ttgccgctac ttttattatt
     1141 gctgagttat cgttccgctt tattgaaact cccattcgaa aaaatggttt tatcaattat
     1201 tttaaaggct tcaaagataa aaactatttc atttggaaaa ataaacctgt tggtaaatgg
     1261 ttgagtatcg ctggtgttgt tgctgtttta gcaatattta cacttggtat gtcaaacgtt
     1321 ctttccgtca ataccaatgc agaaaaacaa caaacgtctg ttaaaacaac cacctctaca
     1381 ccagacgaga agaaagatga taaaaaagac aaagaagata aagctactaa agaaaaagaa
     1441 gactccaaag aaacggacgc aaataaagct aacggacaaa accaaacaca agtgccagac
     1501 aacaaaaata aaacagccgc cacgccaaaa acaatgatta cacaaacagt ggcgattggt
     1561 gattcagtca tgcttgatat tgaaccatac ttgaaagaag ccgttcctaa tatcacaatt
     1621 gatggtctag ttggacgtca attaagagat gctattacaa ccgctactgg ctataagaaa
     1681 ttcaacagcg aaaatagctc cgttattctt gaacttggta caaatggtcc cttcacagaa
     1741 gagcaattaa atgatttatt agatcaattt gacaaagcaa cgatttattt agttaatacg
     1801 cgggttcctc gtggttggca gtctgatgta aataaaagta ttgccaatgc ttcatcacga
     1861 cctaatgtaa ctgttgttga ttggtattca agatctagtg gtcaatctca gtactttgct
     1921 ccagatggtg ttcatttaac taaatctggt gctcaagctt atgtcgccat gttaactagc
     1981 gtcatgaata aataactatc cgcccttaat tgggcggata gttattttta ttttttccta
     2041 gaaacaaacc agcttaagct aattagtaaa aatcctactg ttgcacctgc tacaggcaag
     2101 gaatcccctg ttttaggtaa agcctctttg cttgtttctg ctttagcttt tttctcattt
     2161 acagttaaag atggaatttt gtgacttggc acttctggtt tattgacgtt tggtttgata
     2221 accggattag gtgttgggct tgggtccggt gttggatctg gtgttggtgt tggatttggc
     2281 gtcggatctg gtgttggatt tggcgttggg tctggtattg gtgtttcttt ttcaacaata
     2341 accgtcactt gcactggcaa agctttttgt aaatcatttt ctgcgtttag tgtaacgaca
     2401 tattttcctg gtttggaaag atcaacaaca gtcgcaaaat cacttgtaat cgctgttcca
     2461 tcatttgttt tcgctttgat atctgctaaa aattctgctt ctgttttaga tgtatccacc
     2521 ttataagtga ttttttcatc tgccgtaatc gctgtcttct ctttaattgt tacgtttact
     2581 tgaactgggg ctgcctttaa tccagaatta ttctcagatt gtaaagtaac tgtgtacgtt
     2641 ccaggagtct tgaaatctac tttatcagcg aaatcacttg taacagttga tccgtcatct
     2701 gtttttgcat gaatatctgc taaaaattct gcttctgtca ctggttgatt ttctatatat
     2761 gtttttccac tgtcagctga gatgtttaca gaatggtcga cagtgaagta atgatcatag
     2821 ataggtacag atatattgta cgccccacca tttttaaact gatcaggaat attataagtt
     2881 tgagaactca aatcgatttt cgcgttgtac tccatttttt caagattatc aaaatctgct
     2941 ttacttacat cacttactgt taagccatca ctcgtaattg ttaggcgatt gccatttact
     3001 tgtttctcat tcattgcaaa gtaagtgtcg ctgcctgcag ttgattttac gaaatctggt
     3061 acatagccat cataattaac tgttcgttcc gtcatcaagc tgaatgggac gtataatgtt
     3121 tgcttttctg cattataagt taatgcacta cctttaatat cggagttaat tagtttttta
     3181 ccccctatag tttgggaaaa tgcatacagt tgattcaatt tagggaaatc ttctatacct
     3241 cgataatcat gtactccgtc aaattgaata tttaagctct taagttctgg caatgtttta
     3301 agtggcatga tatccgttat tgcaccatta taactaaggt caatactatt tactttagga
     3361 agtgtgttta ttttagttaa aatagaatca tcatgtgcac tgtgcgaaat atccagtaga
     3421 gttaaactcg tcagcccact taaatttgga attttatcgg atgtaacatc ttttcccata
     3481 attcttaatc gttcaagatt actcaacccg cttattggat tatagtttgt tgcatgaata
     3541 ttatttatgg ttaaatcttt tatattatgg gcatattcaa tacctgtcaa atcagtaaca
     3601 tttatattcg ctaaagtaat atatgttaat gaattcattt gtgcttcagt aatattcgct
     3661 gtactcgatt gtcctaataa tccatttaag tacgctttaa atgttgaatc tggaatgtac
     3721 acattatcct gacttgcttt taatccagtt tgctctgcag caaataccgg gaatgttgtt
     3781 tgcgatacgg ggacagcgag tactgcaaag cataccccaa tttttacgat atttgatttt
     3841 actgacataa gttattacca tctccactct gttatattcg cctagtaaat tttaagaggt
     3901 atccttaaaa gaaactttat gatgtaatta tagtctcctc agcatatgag accaatagac
     3961 aaaatgtgta caaaaatggt tgaaaaagca aaatttagta tctttttagg atttttctat
     4021 tcacatctcc tgattttatg cggtttttat ttggcattta aactagtaaa aaaaagggct
     4081 atttttgtcg aatttttgtc gaaatgaaat cataatattt ttataagcta ttttatagat
     4141 aaaaaactat ccactcgaga attttgagta gatagttttt tatttatttt tacgaataat
     4201 tataataact atgaatccta ccactgcgat agttgttggt actaattttt ctgtttgcgt
     4261 tgatttgact atactagttt tcaaaacaga gatggctgta tctccagaac attagaatca
     4321 gatagactga tctgggcaaa tcacaaaaaa tacaagtgat tgcatggcaa gtctccgtta
     4381 gtattccata cgacatttaa attcgttatt aattttgata aaaatatgtt atttataaaa
     4441 agcatctacc gatattccga tagatgcttt catttttatt caccaaatac atttttccat
     4501 tcgtctcgtt tgtctaaaaa ttctgctgca agcgcttttg caccttctaa actatggctt
     4561 gctgcccaac cgcattggac ttcattgcat gcaggaactt ctgtcgcagc taaaacatcc
     4621 gttagtgttg tggcgatgat ttctagtgca tcatcatagt cgctatgatt aatgaaggaa
     4681 acataaaagc cagtttggca tcccattgga ctaatgtcta ctaatttgtc agtatgattt
     4741 cttgcaagtt ctgccatcaa atgttctaaa gagtgtagcg ctggcatttc catatgttct
     4801 ttattgggtt gtttgaagcg aacatcatat ttgtatattt catctccatg gacgcccact
     4861 ttcgttcccg ccagtctcac aaaaggtgct tttactttcg tatggtccaa attaaaactt
     4921 tctacattca ttttttctgc catgcgtatc cctcctctta ttctttgtta ttatatcaaa
     4981 aaaaaagaat ccttgcatat ttctatacaa gaactctttt tcttccttat tcatcttttg
     5041 catctgaggt atcttttatt tcgggtattg ctagccaaat agaagttggt tcgccttcca
     5101 ttgtttcatc gagtacgaag gatccgttag aatagcgatc cgttattcgt agattggcaa
     5161 cgtctatttc aacaatttgg tctgtgtttg tttcgataaa taggtggtcg ttattatcag
     5221 caagagttat accaatgaag cgatgtggat tgcttttcag ttcgcgtaac atcaataagc
     5281 cacgtttcgc tcttgagatt ggttcaaatt cgcttgcttt catttgtttg agtgagccac
     5341 gttgtgtggc aagaagaata tgtttttgtt cgttcggcat aaggactata ccgccaataa
     5401 ctatatcatc ttgttttaag ttaatcgctt ttacacccgc tgttcttgca cctgattctg
     5461 gaatttcagt aatagaataa cgaaggccgt aaccattttt tgttgctaag aaaatatctt
     5521 ctgtgccatc aatcaaatga acatttaaca gctcatcgtc accttttaat ttaattgcca
     5581 tcatggattt agaatagcgt tgtggtttgt aattcgtaat agctgattgc ttggtcatgc
     5641 cgtttttagt aacgaataaa aagcgttttt cttccgtaaa ggcttgaatt gcaatagcag
     5701 aacggatttc ttcacctgcc gataaatcac tggccaagtg acttacgtga tctccgaggt
     5761 ttttccagcg aatatctggc aactcatgta ctggtcgata aatgaaattc cctttgctcg
     5821 tgaataacag gagcgaatca agtgaattca ttttttggat aaagatggca tggtctgctt
     5881 ctttcatggc tagttccgca ccgtttgatg ctgcataaga acgttggctc gtacgtttca
     5941 catagccttc ttttgtcaca gaaacaatca catcttcatt cgcaacaagt acttctgtat
     6001 cgattttgat ttctgtaatt tctgcttgca cttctgtacg gcgagcagtt ttatattttt
     6061 tcttaatttc cgctagctct tcttttaaca cagcgataag ctctgcttca tcacctagga
     6121 ttttttcaag aacactaatt tgttctgcta aggattttgc ttcactttga agttcatgta
     6181 tatctgtatt tgttaaacga taaagttgta aagatacaat tgcttctgct tgtttttcgc
     6241 tgaaatcata ttttgtttga agatttagtt ttgcatcgcg tttgtctttt gaaccacgaa
     6301 ttaatttaat gacttcatct aaaatagaca aagctttaat taaaccttct aaaatatgtt
     6361 ggcgagcgcg cgctttacga atatcgtatt cagagcgctt cgtaataatt tctttttggt
     6421 gttcaatata agcgtcaagc attgggataa tgcccattag ctccggacgt tttttattaa
     6481 tagcaaccat gttaaaatta tagcttactt gtaaatctgt atttttaaac aggtagttca
     6541 aaacaccttc agcattggca tcttttttta gttcaacagc aatacgaagt cctgtgcggt
     6601 cggtttcatc acgtacttct gaaatacctt caattttttt ctcaattcga agttcatcca
     6661 tgcgtttaac taaattagct ttatttactt catatggaat ttcatgaatt gtaatttgtt
     6721 ttctaccgcc acgaatatct tcaatttctg ttttagaacg aacgacaacg cgtccttttc
     6781 cagtttgata agcttttcga ataccatcaa tcccttgaat aatcccacct gttgggaaat
     6841 ctggaccttt gacaattttc ataatatcat ccgttgtgga aagtgggtta tctaatcgtt
     6901 taataacagc ttcgatgatc tctgttaaat tatgcggcgg aatatctgtt gcataaccag
     6961 cggagatacc ggtagaacca ttcactaaaa ggtttggaaa acgtgctggt aaaacagttg
     7021 gctcactaga tgtgtcatca aagttaggaa taaagtcaac tgtttccttt tcaatatcgc
     7081 gtaaaagttc tgctgatata ggagaaaggc gagcttctgt ataacgcatt gctgcaggcg
     7141 gatccccgtc gacactaccg ttattaccat gcatttcaat cagcatatta cgtactttcc
     7201 agtcttgact catccgtacc attgcttcgt aaactgaaga gtcaccatgt ggatggtagt
     7261 taccaataac gtttccgacc gttttagcag atttacggaa acctttctca gcagtatttc
     7321 cttcgacatt catcgcgaat aaaatacgac gttgtacagg tttcagtccg tcacgaacat
     7381 ctggaagcgc acgttcttga ataatatatt tactatatct accaaaacgg tcgcccataa
     7441 cttcttctag cgctaagtct tggatatgtt gttctggatt actcaaatgt ctttcgcctc
     7501 ctcaaccatc atgttttcat tttctaaaat attttggcta tcttccatag aaaactcgac
     7561 atgcttttca atccattgtc gtcttggttc tactttgtcg cccatcagtg tggccacgcg
     7621 gcgttcagcg cgtgcagaat catctacccg tacacgaatt aacgtgcgcg tatcaggatt
     7681 catcgttgtt tcccaaagtt ggtcagcatt catctcacca agacctttgt atcgttgaat
     7741 catgtagcct ttaccaattt tttggatggc agagtctaat tcttcatctg tccaagcata
     7801 ttcgattact tcttttttac cagaaccacg gcttactttg taaagtggtg gtaaggcaat
     7861 aaatacttta cctgcttcca ctagtgggcg catataacga tagaaaaagg ttaatagtaa
     7921 tacttgaatg tgtgcgccat cggtatcggc atcggtcatg ataactactt tgtcatagtt
     7981 acaatcttct acatcgaact ccgtaccaac tcccgcacca actgtatgga taatcgtact
     8041 aatttcttca tttttcaaga tatcttgtag tttggctttt tctgtattga ttacttttcc
     8101 tcgaagtggc aaaattgctt ggaaacgacg gtcacgacct tgtttagctg atccccccgc
     8161 cgagtcacct tcgactaggt aaagttcatt tttattagga tttcgcgatt gtgccggtgt
     8221 taattttcca gaaagaagtg tttcggaacg tttctttttc ttgccgttac gtgtttcttc
     8281 gcgcgctttt ctggcagctt ctcttgcttc gcgggcttta acagcctttt taactagaag
     8341 agagcttgtt tctgggtttt cggcaaggaa gtaagctaaa tgttctgcta caactgcatc
     8401 aaccgcctga cgagcttcct gcgtccctag tttttctttc gtttgacctt cgaattgaag
     8461 gattttttct ggaacacgga tagaaagtac agctgataaa ccttcacgaa tatcgctacc
     8521 ttcaaggttt ttatcttttt cttttaaaag attcacacga cgagcataat cattgaaaat
     8581 ccgcgtcatt gccgctttca ttccagattc atgcgagcct gctccgcgag ttcgaacgtt
     8641 attaacgaaa ctcaagatat tttcagaata accatcattg aattggaacg ccatttctac
     8701 ttcaatggtc gcattttccc cttcaaagct agctacagga tgaagcacat ctttaccttc
     8761 attaatatat tcaacaaagt ttttcacacc ttcttcaaag tggaaagcct ctgccatgcc
     8821 aactcgttca tcaattaatt caattaacat cccttttaaa agaaatgctg attctcttag
     8881 acgttctgat aaggtttcat agttaaatga agtcgttgga aaaattgctg gatctggctt
     8941 aaagcgaatc gttgtcccag tagcttttga ttttccgatt tttttcagtg ttccatctgg
     9001 ctttccgccg tctttaaatt tttgttggta ggttgcgccg tcacgattaa ttgtaactac
     9061 taaccattca gagagcgcat ttacaacgga tgaaccaaca ccgtgaagcc caccacttgt
     9121 tttatatccg ccttcttggc cgaacttacc accggcgtga agaacagtta aaataacttc
     9181 taccgtagac ttacctgttt tgtgcatccc aacaggcatc ccacgacctt catcgctaac
     9241 actaacactg ccatccacgt gaagtgtcac aacaattttc ttaccaaaac ctgcaagggt
     9301 ctcatcgacc gagttgtcca ctatttcata tactaaatgg tgcagcccgc gtacatctgt
     9361 tgaaccgata tacatcgctg ggcgtttccg gaccgcttcc agtccttcaa gcacctgaat
     9421 agaatcatca ttatactcat tccgattcat atttcaaaac tcccttcatt ccgtcaatct
     9481 acaactttca cgttgttatt cgcttaaaac cactttatca gaatagcatt aactagctga
     9541 ttaataaagt gatagtttag tgacaaattc cttttcataa aaaaacaggc tctgctataa
     9601 gaacctgctt ccttcaaaaa tggtgtttaa ttaatccatt tcttgataag caaccttaat
     9661 gcaataatcc atgacagtag gatatccttt ttctgtcaaa aaatcaaatg cttcctgatt
     9721 agctatgcca agctgtgccc aaaatacatc tgcatctatt tggtcaaaag cctccgctat
     9781 ttcaggtaaa aactctgagc gacgaaagac attcacaata tccacatgtt ccttgatatc
     9841 cgttaaacgc ttgacggctt tttcgccaag aatttcgtct gcattagggt tcactggtat
     9901 aattttgtac ccagcttgct gcattatttg actcactcgg taacttgtgc ggtctggttt
     9961 atcactcaaa ccaatgactg cgattacttt tgccttcttt aagatttgct ggatttcttc
    10021 ttttgttgga ttttgcatta gtctaatcgc cccctactat tctttctaat cataagctat
    10081 ttttgcggtt ttttcaactt ttcatcgtga tttgtcctaa caatttagcc aatcttcttc
    10141 attttgtgct ataattcttt atggaaaaca tcatttcttc ttgaggggtt taaaaatgac
    10201 aattaattta attctgcttt ctttattagc ctatgtgatt ggttcgatac cgtctggttt
    10261 atggattggc aaaatttttt acaaaaagga tattcgcgat ttcggtagtg gtaatttagg
    10321 cgcgacgaat tcattccggg ttctcggaat caaagccggt agtatcgtga cagtgatgga
    10381 cattttaaaa gggactgtcg caacgttgct tccatttttc tttcaattga atgtagacca
    10441 tcatttttgg ttgctaactg gagcatttgc tattattggg catagtttcc cgcttttcgc
    10501 aggatttaga ggcggaaaag cagttgctac ttcggcaggt gtcatccttg cctatgcacc
    10561 attactcttt gtagccgcac ttgtagtctt cttagttaca cttaaactta gcaaatatgt
    10621 atcgctcagc tcgatgattg gagcacttgc agcgttaatt atttctcttt tcatgggaga
    10681 ctggatttta attattcttg ttgcttgtat cgcactcttt gtcatctggc gtcaccgagc
    10741 aaatatcact cggattcgta acggcgaaga acccaaaata aaatggatgt aataaaaccc
    10801 agaagatgca tttcgctctt ctgggttttc gttttaacct actgtaattt catattcgga
    10861 agcaaagaca gcttctggct ctaaatgctc tattcccgct ttatctcgca gttcaacaga
    10921 ttctccagca ccatctgcaa ttccgtacca cggttcaata cataagaaag gggtccccgg
    10981 ttttgccgtc caaacaccta caaatgggaa ttctgggaaa gatactttta caaaatgagg
    11041 tgttttatct gatttgatgg tcatttcttt ttgttttagt gcttcaaaaa taagtgcatc
    11101 gtttttaaat aaatcatagc tcagtggtaa gtattgtgct ggtttatcga caaccttctt
    11161 aatttcgcca ctgcggtatg gcccttctaa acaaagtgtt tctaaattct cttctgttcc
    11221 gaaatccaaa taataatctt caaatgtcgt cccgtctgtt aatggtaaat taaaagctgg
    11281 gtgcgcacca atagagaaat aaattcgctt gttatccgta ttttcaactt cgtaggaaac
    11341 agctaccgta tttttttcta ttgtataaat aatcgatagt ttaaatttgt agggataaac
    11401 tgctaatgaa tcttcgtctg catccaactc aaaacgtacc gatttttctg tttgctcgat
    11461 tacttgaaaa tcacggtcac gggcaaaccc gtgttgccct aagtggtacg gctttccatc
    11521 gactaagtaa gtatcttcta caagccttcc aactgttgga aatagaacag gtgaatgacg
    11581 cccccaaaac ttgctatcag cattccataa atactcaagt ccggtatctt tatggaagat
    11641 tcgcgttaat tctgctccag ctgttttcat ttctacaagc aatacttcat tttccagttt
    11701 aatcattgtt atttctcctc caaatgaaac cgctcgattt gttcaaaggc tttttctttt
    11761 ttcagtacaa cgagttgcat ctcgccaaac aaatcataat gcggaaagtt ttttcgacgg
    11821 ttatcaatcc aatctggggc taaaccatat tgtttccccc attgttgtag ttttttcaaa
    11881 tctacacatg caactttggt tacagttttt gattcaggaa aacgatcatc tagccaataa
    11941 tgggtgataa ttgcaatctc tccacgggct gctttttctt tccataactc catttcatca
    12001 cgttttacac caaaagccat tttttatcac taccagtctt atttattcta aagcttttag
    12061 ataggcttca tgccaattcg gaaatgttct tcttaacgat acagggcgga aatcttcttt
    12121 cgttacacat acatgctgtg tttctcctgt aatggctact tcattcgtat cttcatagca
    12181 aatttcataa ccataagtaa cacgaagtcc atcataccct tttatccatg tttttacaac
    12241 tgccttctgt ccgtaacgca gtggttttac gtaatgaata tgcacatcta ataccggaga
    12301 aagataacca gcctcttcca tatcaaaata acgaaaacct aatttttcaa ttaatcttgt
    12361 tcggccgatt tccatccata caaggtaatt gttatgataa acaacgccca tttgatcggt
    12421 ttctgcatag cgtacttcaa tggttgtttc agcgatttcc attctaaatt cctccagtca
    12481 cacaagttct actttcttat tttaccaaag caaaccaaaa aaagctctcc ccgaatattt
    12541 tcagagaaag cttttctact tttttttagt tgtttttcaa tttttctagt tctacaagga
    12601 atttatcatt aagtacacgg ataaatgtac ctttcattcc tagtgagcga gaatcaataa
    12661 cgcctgcact ttctaattta cgaagtgcat ttacgattac agaacgtgta atgccgacac
    12721 ggtccgcgat tttagaggca acaagaagac cttctttacc attcaactca tcgaaaatat
    12781 gctcaatagc ttctaactca ctgtaagaaa gagagctaat cgccatttgc acaacggcac
    12841 ggctacgagc ttcttcttca atttcttctg ctttttcatg caagatttcc attccaacaa
    12901 ctgttccacc atattccgct aaaagtaaat catcatcagt gaaattgctt tctaagcgag
    12961 ataggataag tgttccaaga cgctcaccac cacctacgat aggtacgata gttgttaaac
    13021 cttttgtgaa taattcactg ttttcgattg gaaaagcagt atattggctt gatacttcta
    13081 agttagaaga agtttcgcct acattgaaaa ggctttgcgt atattcttct ggaaattggc
    13141 gttctgttag catttgtttc atacgatcat tttcgattgg aagtgcttca gaatagccaa
    13201 gtaatttacc tttacggctt acgatatatg tgtttgcttc aatgacatct gtaagtgtat
    13261 ctgccatttc tttgaagttt actgtttttc ctgcagcatt ttgtaacata gcattaattt
    13321 ttcttgtttt ttctaataaa gtcattatta gatcctccta gtattttata aaataaattg
    13381 tgttaaatct ttattctgca taattggtgc aagtttttca ttaacatagt tttctgttac
    13441 tttaatagat tccatattga tttctggtgc ttcaaatagt aaatcttcta gtaatttttc
    13501 taaaatggta tgaagtcttc ttgctccgat attatctgaa tcttgattaa cttggaatgc
    13561 aatctcggca attctttcta cggcttcttt ggtgaaaatc aagtcaattc cttctgtttt
    13621 cagtaaagct ttgtattgtt taattagtgc attgtctggt tctgttaaga ttttgtagaa
    13681 atcttcttga gttaatttat ccagctcaat tctaattggg aaccggcctt gaagctctgg
    13741 aattaaatcg cttggtttag acatatggaa agcccctgct gcgataaata aaatgtactc
    13801 cgtgttgact gtaccatatt tagtagaaat ttgcgacccc tccacgattg gaagaatgtc
    13861 tctttggacg ccttcccgcg aaacttgtgc atttccgccg ccttctttac tagcaatttt
    13921 atcaatttca tcgataaaaa tcatacccat ttgttccgca cgatgaatgc cctctgctgc
    13981 aagttcatct gcatcaatta attttgatgc ttcatcttca aaaagaattt tcttcgcttc
    14041 acgtacggtt actttgcgtt ttttcttttt cgctgggaac atgcccgaaa gcgcatcctg
    14101 cataccattc atttggtcca ttccagcgcc gcgcatcata tcaagcattg gattttgctg
    14161 ttcttttact tctactgtta ctatttcatc atcaagctcg ccgttttgta gacgccattc
    14221 aatttggcta cgtttattct ttaattcttg atctacttct tcctcaggag attcatctgg
    14281 ttgattcatg ccgccgaaaa gcgcttctaa cggattttgc gatgttgttt gttttttctt
    14341 ttggcttggc gctaaaagtt taatcagacg tttctctgca tttttttctg ctttaacacg
    14401 aactaattgc attttttctt cttttactaa acgaacagat acctccacta agtcacgaac
    14461 cattgattct acatcgcgac cgacatagcc aacttccgtg aatttagtag cctctacttt
    14521 ggaaaaagga gcacgaacaa ttttggcaat tcgacgtgct atttctgttt taccaacacc
    14581 tgttggtcca atcatcagaa tgtttttcgg aataatttca tcacggattg attcatccat
    14641 tagttgtcta cggtaacgat ttcttagtgc tactgcaact gatttcttcg ctccggtttg
    14701 tccaataata tattgatcca gtttttcaac aatttgcttt ggtgtcaact ggttcattaa
    14761 cgttatattt gtcaaattaa ccactccttc aaagctcttc tactgtaata tgatcatttg
    14821 taaacacaca aatttcagaa gcgatttcta gcgcatgacg agcgatatcc tttgcttcca
    14881 tttgaccacc attatgtctt ttaagtgctc gcccagcggc tagcgcataa ttacctccag
    14941 aaccgatagc taaaatacca tcgtctggtt caataacttc tcctgtccct gaaactaaaa
    15001 gtagtgtatc tttgtccatc acgattagca tagcttctaa ttttcttaaa acactgtcac
    15061 tgcgccattg ttgagcaagt tcgactgatg ctctttctaa gttaccatta tattcattca
    15121 atttcgcttc aaatttttca aataaagtaa aagcatctgc gactgaacct gcaaatccag
    15181 caattacttt atcatgaaaa agacggcgaa cttttttggc ggtatgtttc attacgaccg
    15241 attcaccaag cgtcacttga ccgtctccag ccatcgctgc ttttccgtca tgttgaaccg
    15301 caaatatcgt tgtagcgtgc aattccattt ctttaacctc ctccaaattt aagccctagg
    15361 atgatgtttc atataagtag actttaaatg ctcttttgtc acgtgcgtat agatctgggt
    15421 ggatgataag ctagcgtgcc caagtaactc ttgtaccgtc cgcatatccg ccccgttatt
    15481 aagtaagtct gttgcaaatg tgtggcgtaa catatgcgga tgaattttcc gagttaatga
    15541 agctttacta attattttcg acaagcaata cctaatgccc ctggtcgtca aaggatcacc
    15601 gtaatgattc acaagtaaag catcatgtga ctttttatag cgagacataa gattggcacg
    15661 ttctggcaaa taatctgtaa tcgcatcttc tgcatacacc ccgaatggca catatcgttc
    15721 tttattccct tttccgcgta tgaggatggc ttgataagat gtatctaagt caggcaacag
    15781 tattccagca cattcactca cccgaattcc cgtaccatat aacacctcta aaagcactct
    15841 atctcgcaat gtaagcgttt cattatcttc atagaccact tgaaacaaag cttccatttc
    15901 ttctgaatag aaaaatttgg gaagccttaa ctgatttttc gcatgtgata cgtaagtaaa
    15961 cggattttcg ttaataacat tctctcttaa aagaaaagtg taaaaactcc gtaaacttga
    16021 aatttttcta gctacggttg tacgagaaaa agatttttgc tttaattccg tcaaataaat
    16081 acgcacatct agaaaagtaa cttgctgata tgtggtaata gattgttcat ttaaaaagcg
    16141 gcgaaaatca agtaaatcat tttcataagc tgtactagtg ttcactgaat aattacgttc
    16201 tgagtgaaga tagtcaaaga actgttgctc taacttcccc tcttgtatca tacgtataca
    16261 cctctcaaac actatcatgt taacatatca atatccacgt tgcaataatt ttatacattt
    16321 ttcgcaactt tttgaattaa tctgcattta caatcaattt aaataaaaca cttaactttt
    16381 gtgaaaaaac caacatttat taacaaaatc tgtctagacc atttatcgga aagaaaaact
    16441 gtctttccac cactatcaac tctcttgaaa taccaaagta gccatcgtga tgaaaagaac
    16501 agcaaagaat agtcctcaat tattatagtg tttttatagt tgttctgcaa ccctttttat
    16561 tgcatttagc gctctttcag ctaatttttc attacgttct tgttttgcac gaatttttgt
    16621 ttcaagctct gggaagagtc caaaattaac attcattggt tggaacgatt ttttactagc
    16681 actcgtaatg taatgggcta gactaccaat cgccgtttct gccgggaaaa ccactagttc
    16741 tttttcctct acaaaattgg ccgcattaat ccccgccgca agtccactag ccgcggattc
    16801 aacatatccc tctacacctg tcatttgtcc agcaaagaac aaatcattgc gtgttttcag
    16861 ttggtaagtt ggttcaagca cagttggcga gttaataaat gtgttacgat gcattacacc
    16921 ataacgtacg atttcagcat tttcaagtcc tggaatcatt ccgaaaacac gtttttgctc
    16981 accccattta aggtgcgttt ggaaacctac catgttgtaa agtgttcccg ctgcgtcatc
    17041 ttgtctaagt tgcaacacag cataaggtct tttcccagtt tttggatctt ccaaaccaac
    17101 gggctttaat ggaccaaata acatcgtttt aattccgcgt tttgccatta cttcgattgg
    17161 catacatcct tcgaaaaaca cttctttttc aaattctttt aaagcagccg tttctgccgt
    17221 tactaatgct tcataaaaag cattgaattc ttcttctgac atcgggcagt ttaagtaagc
    17281 agcttctcct ttatcatagc gggatttcaa ataaacttta tccatatcaa tgctatcttt
    17341 ttcaattatt ggtgctgctg catcataaaa gtaaagatac tcttcccctg ttaattgttt
    17401 aatttcatca gcaagcgcag gacttgtaag tggaccggtc gcaataattg ttggaccttc
    17461 tggaatagta gttacttctt ccgtatgcac tgttacgagt ggatgatttt tcaccttgtc
    17521 tgtaatataa ccagaaaatt catgtcgatc aaccgcaagt gcccctccag ctggtacaga
    17581 tgctttgtca gcggcttcaa tgataataga atcaagtatc cgcatttctt ctttaataac
    17641 tcctacagca ttcgttagac cgttagctcg caaggaattc gtacatacta gctctgcaaa
    17701 tttatctgta tgatgtgccg gagtttgttt taccggtctc atttcgtata aatccacctt
    17761 taccccacgt tttactaact gccatgctgc ttcacttcct gctaaacctg ctccaattac
    17821 attaacactc ttttccattt gtccgcctcc tcgcgcaaca atggcaacac aagaacgatc
    17881 caagtgttgc cattttccga ttattgttgg gttgattctt tgtaatcaca atttgtacat
    17941 tgtacttgta cacctttttt caatttcttc tcgactaatg ctcgtttctc acatttcgga
    18001 caagcccgtt cgaccggttt atcccatgat acatagtcac aatctggata acgatcacaa
    18061 ccgtaaaaaa tacgcttttt cttacttttt ctttctatta catgtccttt ctcacatttc
    18121 ggacacgtaa cgccgatttc tttcacgatt gctttcgtat tacgacaatc aggaaatctg
    18181 ctacaagcta ggaacttacc gtatttaccc attttgtaaa ccattggagc tccacaaaga
    18241 tcacagtcaa ttccggctgg ttcatcttta atctcgattt tttccatttc tgcatctgct
    18301 tttataacat ttggttcaaa tcgtttataa aattcatcaa tgactttcac ccattcgact
    18361 tctccgtgct ctacttcatc gagctcactt tccatgttgg cagtgaattt gacatctaaa
    18421 atttctggga aatattcttc aatcatttca ttaacgattt cacctaattc agttggaata
    18481 aagcgtttat tcgttaaaga aacataattt ctgcgctgaa ttgtgtcgag tgtcggcgaa
    18541 taagttgatg gtcgaccaat accaatttct tcgagcgttt ttactaatct agcttctgtg
    18601 taacgtggag gtggctgtgt gaaatgttgc cgttgttcga gtgattcgga ctgtacctta
    18661 tctccttttt tcaaatctgg taagatattt tctttttctt ccgtattatc atcgttactt
    18721 tctacataga ctttcatgaa gccgtgaaat ttaattttag atccatttgc tctgaagttc
    18781 acgccattgt tgtctaagtc aacgcgcatt gtatcaagaa ctgctggcgt catttggctc
    18841 gcgataaatc tttcccaaat caaacgatat aagcgaagtt ggtcccgtgt taaaaattct
    18901 tttacttctt gaggacttct cattgcactt gtaggtctga ttgcttcatg ggcatcttga
    18961 gcacctttag catttttatc tgaacgttta tgattacgag aaaattcggg tccataggtt
    19021 tctttaatgt aattgcttgc ttctagtata gcggaatcgg caatacgagt ggagtctgta
    19081 cgcatatacg taattaagcc gactgtccct tgtttaccaa gtgtaattcc ttcatacaat
    19141 tgttgggcaa gcatcattgt ttttcttgta cgataattta gttttcgagc tgcttcttgt
    19201 tgcaaacttg aagtagtgaa tggtgcagct ggatttctaa gtctttcttt tttcgttaca
    19261 tctgttacgt caaatgattt tccttttatt gcagacatta cttcttttac atcatctgca
    19321 gtggaaagct ttttcttttt accatttaca ccataaaaat tggcttggaa ttttttcttc
    19381 cctttaagga agttaccgtc aattgtccag tattcttcag gtttgaaatt attgatttct
    19441 ttttctctat caataatgat tcgaagtgcg atagactgaa cacgccccgc actcaaacct
    19501 ttcttcactt ttttccatag aataggactg atattatatc caactaaacg gtccaaaatt
    19561 ctgcgtgctt gttgcgcatt gactaaatcc atgtcaattt tacgtggtgt tttgaaagat
    19621 tcttttactg cttccttcgt tatttcgtta aatactacac gtagtttgtc tgattgatct
    19681 aactctaggc tattggctaa gtgccatgca attgcttctc cttcgcggtc tggatcggct
    19741 gcgagataga cttttttcgc ttttttggct gcttgtttta attcttttaa aacagggcct
    19801 tttccgcgaa tcgtaatata acgaggttcg tagtcatgct ctgtgtctac acccatttga
    19861 ctcttaggta agtcacgaac atgtcccatt gaggctttca ctttaaattt cttacctaaa
    19921 tacttttcaa ttgtttttgc ttttgcaggt gactctacaa tcactaaata atctgccata
    19981 tctattatat tcctccctga tttgggtcaa tacacgggct ttactcgttg tcttaatcct
    20041 attacagtct tagcctcgcg ttcaataagt tttcaatgct gattgttcac ataattcagt
    20101 agtaaatatt agcccttcct actgggtttg tcaatggctt ttatgaaaaa gtccattttt
    20161 tgatgtttta tatcagcttt ctttagcaaa cttatctcaa aaaatcagga aatgcaagtc
    20221 aaatcactta aaaaagataa tttcagtata tttatggctt aatttgaata aattcttcta
    20281 ttatattgtt cgaattcata actaacttgg caccttcttg aattaaatag ttcgtcccct
    20341 gccatgtatc aataaaaata tttcctggaa cagcaaaaac ttgtctgttt tgttctaaag
    20401 ctatatcagc agtaatcaac gaaccgcttc tttcggcagc ttctattatt actgttccta
    20461 tagccaagcc gctaataatt cgatttcttt ctggaaaatg ccatcttttc gcttcttcat
    20521 cgggtaaata ctcacttaat aacaaacctt ctttgacaat ttctttcgct agaagttcat
    20581 ttttctttgg ataaactttg ttgacacctg aacctagtac tgcaatcgtt gtaccttgtt
    20641 tatttaaagt ggctctatgg gctgtagagt cgattccgat agccatcccg ctaactatag
    20701 tcagcttatt ctcagcaagt tcactagcaa ttttcataca agctttccta ccatattcac
    20761 tcatctgcct tgtaccaacg atggcaattg cttgttgttg taataaatca atatttcctt
    20821 tacaaaataa aattggcggc gcttcataaa tttctcttaa aagcgctgga taggcatcat
    20881 ctaaaatcca tattaaggta acatcatcaa aaaagcacgc ttctgctgtc tctagctcca
    20941 ttagaatctg tgcgagttta tccacaggaa agaaagattc tgcaaatgtt tgtgttgtca
    21001 tttcatactg gtcgaattct gttaattttt gccaaatgct ggctcttttt ttagcagaaa
    21061 tagacttaca agaagcaatt ttgagccatg tatgtcgttg tttaaaatcc atctgttgca
    21121 cctccctaat agttactccc agtgtacaaa cattgggctt ttttgtaaaa tgaccaaaac
    21181 ctataaaacg gcataaaaaa acgtattttc catgttgaaa atacgttttt ctctatatga
    21241 tttagttatt ttaaactatc aaaatgcaac tttgcttctt ttacaggcgc aaaacttata
    21301 cgatggatag gacatatacc aattgtatct aaaccaagta aatgtttttt tgtgccgtag
    21361 cccatattgt ttgcaaaatc atacccggga tacttttcat cgtacatctg cattaatcta
    21421 tctcttgtta cctttgcgat gatagacgct gcagcaatcg aaatgctttt tgtatcccct
    21481 ttgataagag atagttctgc ctcggtatat cttagtggca ttgcatctat tagaacaaaa
    21541 tcaggttctg gtgttaattg atctaacgct tcacgcatag caagtttcgt tgcctcataa
    21601 atatttactt gatcaattac atcatgttct ataatcccta ctccgatagc aattgcttct
    21661 ttttttatcg tttcaaacaa agcatcacgt tttgcttcac tcaattgttt agaatcattt
    21721 attccgacaa cagaaaaatc agctggtaaa atgacggctg ctgctacaac tggtcctgcg
    21781 agaggcccac gtcccacttc atccactcca gcgatatact tgtatccttg ttggaataaa
    21841 tctgtttcat attgtttcat ttcttcaagc ttgttccgta attgcgcttc tttttcccat
    21901 tttctccttg tagtttccag aagtttttct acacctttac gctcatcttg catgcatttc
    21961 cgaaaaaagg gatcatgttc tgatgtgact tggtttagtt tttctcggat aacggatatg
    22021 gaatcgctca ttcgacttca tcttcccaat ttgggaaatc aaacgacatt ctccctaact
    22081 tttgctgacg aatttctcga actaccgttt cggctgcgcg agaataatct ggatcattgt
    22141 atcgatctag aagccctctt ttttcagcaa taaaagcaag tgtttcgata ggatcttcag
    22201 agactgtctc tactttcagc cagttttgaa gtctgtcggg ataatgtttt tctaaaaagc
    22261 gcaaaccgta accagcgatt tcttccattt gtagtaaatc atctttaatt gcaccagtaa
    22321 gagctaattt gtagccaatt tcttgatctt caaatttagg ccaaagaatc cctggtgtat
    22381 ccagaagttc taatgttttt cccactttaa tccattgctg tgctttagtt acaccaggtt
    22441 tattacctgt ccgtgcaata ttttttttcg ctagtcgatt gattaatgtt gatttaccaa
    22501 cattcggaat acctaaaatc atcgcacgaa ttgctcttgg cttcatacct ttacttctta
    22561 aacggtcgaa tttttcagcc attaattttt cggcggcttg ttctattttg aatagtcctt
    22621 taccttcttg agcattcaca gcaactgctg gcaagccttt ctcagcaaag tagtcaatcc
    22681 attcttttgt tgttttttca tcggcagtat ctgctttatt taaaataatc actcgtcttt
    22741 tttggtggat aatttcttct agcatgggat tagaggaaga gagcgggata cgcgcatcta
    22801 ccaattcaaa aatcacatct actagtttta atttttctgt tacctcacgg cgagctttgg
    22861 ccatatgacc tggaaaccac tgaattgtca ttatatactc ctaatctata agtttggcat
    22921 cttcaatcgg ccagtaacaa atcggtgttg ttcctaacac cttgctaaat ggaattggcc
    22981 caattatccg actgtctttg cttgctcttc gattgtcacc taaaacaaaa taagtatctt
    23041 ttggaatttt gccaccatct agttgatctt tcgaactgta atcatctgtt aaatagccat
    23101 cttttaactt ttctttgtaa gtatccaaat atggttcatt atacttttta ccattgatgt
    23161 aaagttggtc ttctttgtat tctactgtat cacccggcaa accgatcact cgcttgatgt
    23221 attcttttcc atctgattct cggaaaacaa tcacatcgaa acgatctaca tttccgaagc
    23281 gatttataat tacacggtca tcgctatgaa gtgtaggcat cattgatatc ccatcgacga
    23341 gaatagggac aaataaataa aaacggatta taacagctat taacactgct agaacagccg
    23401 cccaaatcca tgaccataac cgttttaaat tcttctcctt caaaaaatcg caccgcccta
    23461 ttttatacta acagtcttat tataaacgaa aaaacgctca tttaatagag aaatccgcga
    23521 aaaagtatct tcacggactt cacattattt tccaaattgt atcactgtac cgtttaccat
    23581 ggaatcatca ataaatccga aaacgcgact atctgaactc ccgccgcgat tatctccaag
    23641 tacaaatagt ttccctttcg gaacagtact ttcgcctgtc atatcctcca gcgtataatc
    23701 cgctatgtat ggtttttgcg ttggatctgg attccaaagg gttaatgttc cttctggcaa
    23761 gtaattttct acttttcgtt ttccatttaa atataattca ccgtttttaa atgctatttt
    23821 atctcccggc aaaccaatca ctcgcttgat gaaatgctct cctgaaccaa tcattggagg
    23881 ttcatcaaac acaataatgt cgaaacgatc aggcttggaa attttttcaa tgaaaattct
    23941 atcgccatct tgatatgttg gaaccataga tgttccttct acttttactg gtgcaactac
    24001 aaagttacga atcacaagtg caattgcaag cgctgcaacg ataactagca cccagcttaa
    24061 taattggtgc gccccgcttt ttttcttggg ctttttgtca tattgatctg tcatctatgt
    24121 ctcctcctag acttcctgta gggtcacatt aacgttctaa ggattttcca aatgaaatta
    24181 cttttccaag cacggtatcc tgtgatataa agccaatgta gcgactatct ttacttactt
    24241 gacgattatc tcctaaaaca aaaagttctc ctttagggac agtgagagag ccgtcagagt
    24301 ttggaatgtc tgccatcgta aaattaggat cgccttctgc atcagtggtt aaataaccgt
    24361 tttttagagc ttctttttct gaatctaaat aaggttcatc atattttttt ccattaatat
    24421 aaagttgatc ttctttgtac tccactttat ctcctggaag gccaatgacg cgtttaatgt
    24481 actctgcatt ttcctcatca ggcgcaggaa atacaataat gtcaaaacgc ttcggatctg
    24541 ataccttgtt aataaataaa tgttccccat catgaagtgt tgggtccatt gatttcccat
    24601 taacagtaac tggagaaatt aaaaaatagc gaataccaaa agcaagtata agcgcgatga
    24661 gaattatttt tatccatcca aatgccccag aaaaaaattt gttttcactt ttcatgtctt
    24721 tttatcctct ccaattaata ttaataaagt atagcacgaa acaagtcaga tattacagta
    24781 aaacaagctg gtttgataga aaaaatgcgc gccaattacg acgcgcattc taatcatgca
    24841 gatgttttaa ttggaataat agaaccatct tctaattgca gttgcggttc ttcttcacca
    24901 cgagctgctt tttcagtaat tatacacttc gtaatgtcat cacgagaagg aatttcgaac
    24961 atcacttcaa gcataatctg ttcgataatc gaacgaagac cacgcgctcc ggttttgcgt
    25021 tcaatcgctt ctttcgcaat ttcaattaga gcagttggtt cgaattcaag ttctacatca
    25081 tcaagctcta acatacgttt gtattgtttt actaaagcat tcttcggttc tgtcaaaatg
    25141 gaaacaagcg cagcttcatc taattgttca agcgttgcta taaccggtaa acggccgata
    25201 aattcaggaa ttaaaccgaa tttcagtaaa tcttctggaa caacgcgaga taaataagtt
    25261 tcatcatctt ttagtttcgc attatctgtg ccaaagccaa tgactttttc acccattcga
    25321 tttttaacga tttgttcgat tccatcaaaa gctccaccaa cgataaatag aatatttcct
    25381 gtatcaattt gaattaactc ttgatgagga tgttttctac cgccttgagg aggaacgctt
    25441 gcgacagtac cttccaaaat tttcagtagc gcttgttgta cgccttcacc ggaaacgtct
    25501 ctagtaatag atgggttttc ggatttgcga gcaactttgt caatttcgtc aatatagata
    25561 ataccttttt cggctttttc cacatcgtaa tctgctgatt gaatcagttt aagaagaata
    25621 ttttctacat cttccccaac gtaaccagct tctgtaagtg aagtcgcatc tgcaatagca
    25681 aatggaacat tgagaattcg cgctaatgtt tgagcaagaa gtgttttacc actaccagtt
    25741 ggaccaatta gacaaatgtt acttttcgaa agttctactt catcttcttt cgtttcattg
    25801 gaattaatac gtttgtagtg attgtaaact gctacagcaa gtgctttttt agcacgttct
    25861 tgaccaataa catagtcact taatatatga cggatttctt gaggttttgg tacttcacca
    25921 aaatcaacaa attcagaaat acctagctct tcttcaataa tttcattaca aagctcgata
    25981 cattcatcac aaatataaac acctggaccg gccactaatt tacgtacttg atcttgagtc
    26041 tttccgcaaa aggagcattt aagttggcct ttttcgtcgt taaatttaaa caaaatattt
    26101 caccccttcg cataggtatg ttgcttatag gcgatttttt catctcctat gtgtgttaat
    26161 aatatcattt gtttattaga aatgccaatc atctgtattc atatttctac attcagaagg
    26221 acacgagtat aactcatgcc ccccattttt taatgaaatt attaaatcag tcgtagctta
    26281 tttttccact gcactatcta ataaaacgtc gatagctttg cggattttaa gatcagattt
    26341 aagttcgctc atatcgccaa gtgcagcacg aactgcgtct ttttccatac catatttttc
    26401 agctaatgta gaaatttctt cgtcaatagc ttcttccgtt ggctcaatgt tttcagcttc
    26461 cgcaattgct tcaagcacta agttcatttt cacgcgtttt tcagcgtctt tttccatttg
    26521 tgcgtgcata gcttcttctg tttggccagt gaattggtaa tataattcag gagttagacc
    26581 ttgtgcttgt aaatcttgtg caaagtgatt cattaaatga tcagcttcat ggtgaaccat
    26641 tgcgtgtgga atgtccactt ctgcattttc aacagctttc gcaataactt cttcttgttt
    26701 agcttgagca acagattctt cttttgcttc ttgtaaacgt ttagagattt tttcttttaa
    26761 ttcatctaaa gtttctactt cttcgtcgat gtcttttgca agctcatcgt caagagctgg
    26821 aacttctttt gttttgattt cgtgtaattt cactttgaaa actacaggtt gtccagctaa
    26881 atcttccgca tgatattctt ccgggaaagt tagctcgata tccgcttcgt cgccagcttt
    26941 taagccaact aatttttctt caaaaccagg aatgaattgt ccgcttccaa gttctagaga
    27001 atgattttca gcttgtccac cttcgaaagc tacgccgtct ttaaatcctt caaaatcaag
    27061 gataacagtg tcaccgtttt cagctggtgc atcttcttta acaactaatt cagcttgacg
    27121 ctcttgtaat tgttttaatt ccgcttctaa ttcttctgtt gtaagttctg tttcacgttt
    27181 ttctacttca agacctttgt aatctccaag tttcacttca ggttttacag taacttctgc
    27241 tgttaaaacc caagtttcgc ctttttccat agactcaatg tttacttgag gagtatccac
    27301 tggatcaata ccagcttcgt caattgctgc agaatatact tctggaagca agatatcaag
    27361 cgcatcttgg aaaagagctt cttcaccaaa acgttgattg aaaatttgac gtggaacttt
    27421 ccctttacgg aagccaggca cattaagagt tttacgcact tttacgaaag ctctatctaa
    27481 accttctttt actttttctt gttcaatttc aaaagtaagt tttccaacat taccttcttg
    27541 tttttcccat tttactgaca tggtataatt ccctccatca tctatttagt tcaatttaat
    27601 tactctcatg acaagtttca gccatactca ctaataataa cacagatatc cctgacttga
    27661 aaacaagaaa tatcattata taaaataatt ttgctgccta atttctaact cttcaataat
    27721 ggaaatagct tcttctactg ctaagtgatt cacatcatcc gaaataacac aataattacc
    27781 gtacattgca ttcgcccatt tatagtatgc gtttatccaa acatctactt cttgaggctc
    27841 taattcaaat ggataaagca taaatagatg ttgctgaata ataccaatca cttgctctaa
    27901 aagacttgga ttactatgtt cgagcatctc agcgagtcca gcaaaaatag cttccgcaaa
    27961 tttgttatca gcaagcattg gcacaagact tggattaaaa ataccgtgct tatctatttt
    28021 ttgaactgta atatcttcat ttatttcttt ttcttgcatt aattcgaaaa tcatcgactg
    28081 aacaaacggg gaaaaactat catccgctag aaaagcttta aaagctggca aaaatgaatc
    28141 tatttctaag aaacgagctt cttgtaaaaa ctccaattgt tccgtcgtat gccaagacgc
    28201 aaattcacga atgtctcttc ttgggacaaa ctgtttggga aaaggaataa cattgtcagc
    28261 tatttcttcc gttgcttctt ttttttcttc ttccatataa tgcctaacta atgtgaagta
    28321 cgtatccata ttatcttctt tcataaatgt tacagatagc tctccaagaa tttccttatc
    28381 atagccattc atcgtcaaaa agttttgtcc aatttcttgc gctttcttcg ttttatctgt
    28441 ctgattataa aattgaatta atctatgtac aatttcctcg ttgcaaggct cttgatgata
    28501 cgcattctcc aaataatgta gcgtactcat tttttcttct tcggacaacg aggtaatccc
    28561 tttttccaga aattttttaa cactcattgg aaaaaaagca ccacttccac tcatcgtttt
    28621 atctcctttt agttgaaaaa gctttattta tactaactgg atttaccctt attgttaaaa
    28681 atctaaccat ttctagcaaa aatgttgatt tggtttgatt cattctactt gtatagtctg
    28741 gttctgtcaa gaggctttta tggtgtttta tcacgaaaaa ctgtctagat taaacttcat
    28801 tttttatcaa atttttattt caaaaaaatt agacctcgat ttttacaccg aggtcttacg
    28861 ggcgtttaaa cttttttatt caccgaattc ttccaaaact tcttgataga cctcctgata
    28921 aatttcttca atgctatctg tttcttccgt tgtttgccct ccatctaaga acaattcttc
    28981 ttcaggtaat tcttccactg ggaatttact tataactgca tttgatagta tataattttc
    29041 accatctgga tttttttcta agaaaagtgt atattcttct cccttttcca tatttttata
    29101 accatcaata gttaaatcat attctttccc ttctaccaaa acattttcta cgctatactc
    29161 caacacttta atagtcatac tctcgctcaa ttttcctgtt gtatctttct cgatagaatt
    29221 tatttgcaca tcgctcatcg tataaaaatc ggttggaaat acattttctt ttgtttcttt
    29281 tgttacagtt gttttttcag attttttggt tgctttaatg ataattgggg catctttttc
    29341 aagggtatcc atattttcag caagtttgag gtattttccg tgataagaga ccaccccatt
    29401 gtgcgccttt attgtttctg ctccgttttg agctgttgct ggttcttctg atgttttttc
    29461 tttcacattt tcactattag aacaagcagt taatgtacta agacatacta aacctagaat
    29521 cattgttatt cttttcttca ttgtcattcc tcctttttac ttatataaag ctttgatgcc
    29581 attaaaatcg tctgtttgag gttttgtttt atttataaat cctttgtcta acataattgc
    29641 atttttagtt ttcacgtgcc ctaagccaaa gccatgacca aactcatgca caatagtttc
    29701 tattttatga ttcgttgaaa gtgaacgaaa gcctttatac aaagtgatct cattcttgga
    29761 gattaattta tttgatttgt agtaagtggt gttgcagacc gccaaaacac tccccttatt
    29821 tgtacccgaa ctactaaccg taaagttagg cttgacatca tttcctatgc taaccgtatt
    29881 taagtaagga gaaggattcc aagctttcgc accgcttata ataatatttt taaacccttt
    29941 cgccgaaccg ttaatataaa ttttaaaatt ttttgcacta gcctttgtca tcacatatcc
    30001 aagttttgta tatgcgcttg cattagttgg cgctaataac gcaactaaca ccgtaaaaac
    30061 aagaaacact gctaacgttt ttttcctcat gatgtttact ccttcgctca aattccacac
    30121 attttgtgtg cgtttatttt aaattaaatc catacataat ttgttaaaaa gatattcttt
    30181 tcatcttaca tctttccccc gtgtctagtc tagttattca taaaagaatt tcaaatcgca
    30241 cattaaaatt tcactaagaa taacagcatt tttgtgtgat agtctaacag ttcctttttc
    30301 aatgttactg tatcctgatg tgtactttac aaaaacac
//
LOCUS       DASDYO010000017        30270 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.017, whole genome shotgun sequence.
ACCESSION   DASDYO010000017 DASDYO010000000
VERSION     DASDYO010000017.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 30270)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 30270)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..30270
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.017"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..1590)
                     /locus_tag="U0290_000694"
     CDS             complement(<1..1590)
                     /locus_tag="U0290_000694"
                     /EC_number="6.3.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CTP synthase"
                     /protein_id="HEM2300744.1"
                     /translation="MTKYIFVTGGVVSSIGKGITAASLGRLLKNRGLSVTIQKFDPYI
                     NVDPGTMSPYQHGEVYVTDDGAETDLDLGHYERFIDINLNKYSNVTTGKVYSEVIKKE
                     RRGDYLGGTVQVIPHITNELKDRVFRAARMTNSDIIITEIGGTVGDIESLPFLEAIRQ
                     IKSDVGAENVLYIHTTLIPYIKAAGEMKTKPTQHSVKELRSLGIQPNIIVVRTEQPVS
                     QEMKDKIALFCDIKASEVIESRDEETLYNVPLSLQKQKMDDIVLEHLQLEAPQAEMTD
                     WKNLVHRVKNLSKKVRIGLVGKYVSLQDAYLSVAEALRHAGYDHDAEIEIDWIDSEKV
                     TKENVAEIMKDVDGILVPGGFGDRAIEGKIAAIEYARVNKVPYFGICLGMQLATVEFA
                     RNVLGLEGAHSAEIEPETKHNIIDLLPEQKNIENMGGTLRLGLYPARIKQGTKAEAAY
                     GTTLVEERHRHRYEFNNEYREQMEEAGMIVSATSPDGRLVEVVELADHPWFVACQYHP
                     EFISRPNRPQSLFKDFVGAALN"
     gene            complement(1955..2491)
                     /locus_tag="U0290_000695"
     CDS             complement(1955..2491)
                     /locus_tag="U0290_000695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit delta"
                     /protein_id="HEM2300745.1"
                     /translation="MDLKNLTQEERSELSLIDVAHFILEQRKETILFPELVKEIQAFL
                     GLKDAEIRERLVQFYTDMNIDGNFISLGNNTWGLRAWYPMDAIDEEVQTQTTPKKKRK
                     SDDDDDEDEEILDDDVDYDDEEIVEELGEEEISLADVLLDEDEDDDDHLPDGIEGDLA
                     TVEDDYTDGDYTEDPEDK"
     gene            complement(2857..4527)
                     /locus_tag="U0290_000696"
     CDS             complement(2857..4527)
                     /locus_tag="U0290_000696"
                     /EC_number="6.1.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine--tRNA ligase"
                     /protein_id="HEM2300746.1"
                     /translation="MNVMQENQIKLIEHIKQGVVQAVGLEEAEVPEILLEVPKDKKHG
                     DYSTNIAMQLARVAKKAPRQIAESIVPELKKDNKLIKEVEIAGPGFINFYLDNAYLTD
                     LVPVILTEDKKYGESDFGKGEKFQIEFVSANPTGDLHLGHARGAAIGDSLANIMKMAG
                     FDVSREYYINDAGNQINNLVLSAEARYFEALGLDSEFPEDGYRGADIISLGKDLAAKY
                     GDKYVHTSEEERRSVFRVDALAFETGKLRADLEEFRVSFDEWFSETSLYEENKVLPAL
                     ERLRENGYIYEQDGATWLRTTDFEDDKDRVLIKSDGSYTYFLPDIAYHLNKLERGFDV
                     LIDIWGADHHGYIPRMRAAIEALGYSPNQLEVEIIQLVHLFEDGVQVKMSKRTGKSVT
                     MRDLIEEVGLDATRYFFAMRSSDTHMNFDMSLAKSTSNDNPVYYVQYAHARISSILRS
                     GKEQGLEVTKDADMSLLQTEAEYDLLKVLGEFADVVAEAATKRAPHRIVRYLNDLASS
                     FHRFYNSNKVLDMDNLEVTKARLALIKTAQITLRNGLTLLGVSAPEKM"
     gene            complement(4524..4973)
                     /locus_tag="U0290_000697"
     CDS             complement(4524..4973)
                     /locus_tag="U0290_000697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1934 domain-containing protein"
                     /protein_id="HEM2300747.1"
                     /translation="MTANQMERKKVTIHITNVIRQMDAEEKSDMSVSGVFYRDKGNRY
                     LHYEEKQLAGTIRTVLKIADNELLLMRSGAVNMRMHFFRDNRRSTASVDSGAGKLQLE
                     SELVSMEELYENKPDVLSEVAFQYDLLSHGEYIGSYTVLMKIEEDAE"
     gene            complement(5051..5704)
                     /locus_tag="U0290_000698"
     CDS             complement(5051..5704)
                     /locus_tag="U0290_000698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-2 protease family protein"
                     /protein_id="HEM2300748.1"
                     /translation="MPSFLAYPLEMIPYVLVTLLIAFTIHEWAHALVALAFGDDTAKN
                     EGRLSLNPVVHIDLFGLLMILIAGFGWAKPTPVNRFKLKKRRLGSILVSLAGPVSNLL
                     LAMVGVGLYALFLNYSFFTYGSVAETFLMIFVQLNLVLFVFNLIPLPPLDGYQILVEF
                     LPMSTRSKLEPLERYAMLIFLVVALTPISEFTIQPIFNTVIPFVLNVILTIFGLTSF"
     gene            5739..5963
                     /locus_tag="U0290_000699"
     CDS             5739..5963
                     /locus_tag="U0290_000699"
                     /EC_number="5.3.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-oxalocrotonate tautomerase"
                     /protein_id="HEM2300749.1"
                     /translation="MCYNEKNVDRGEKMPFVTIQFLEGRTDDQKKALVSEVTEVVAKN
                     LKAPKENIHVILEEMKKTDYGVGGVRKSDI"
     gene            complement(5998..7320)
                     /locus_tag="U0290_000700"
     CDS             complement(5998..7320)
                     /locus_tag="U0290_000700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM2300750.1"
                     /translation="MSYLTEKLREEKVFKDPVHGYVHVSDKIIWDLIATKEFQRLRRI
                     HQLGTTSLTFHGAEHSRFNHSLGVYEIVRQIIDVTFANEPQLDPEERMVALCAALLHD
                     LGHGPFSHAFEKVFGTDHESYTQEIIIGDTEVNKILMRAGEEFPLKVAAIIKKNYPNQ
                     TLVKLISSQIDADRMDYLLRDAYYTGVSYGKFDLERILRVLRPSPDGNGVIVKYSGMH
                     AVEDYIMSRYQMYQQVYFHPVSRSGEVLLWKILERAKKLYCAGYEFQATPIQVLPFFL
                     NEVSLKDYIVLDDIVLMYYFSIWQEEEDPILSDLCSRFLNRRLLRYINYDPKEDAELY
                     AELKGLLEKADIDPSYYLVIDSSSDLPYDYYLPGVGSGKDPIKLLMGNGELRELSTES
                     PVVEAIGRERRTDIKLYYPLDFIESGHVEEAITERMIALIHAHSLKEK"
     gene            complement(7335..8171)
                     /locus_tag="U0290_000701"
     CDS             complement(7335..8171)
                     /locus_tag="U0290_000701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoyl-[GcvH]:protein N-lipoyltransferase"
                     /protein_id="HEM2300751.1"
                     /translation="MNIEDTLLKQDVWRFIDNTTINPAFDAIQSFATDDTLCRSVGAR
                     MAPSTVRGWVHEKTVSLGIQDSKLPDIDKGIAFLQEQGYRVVVRNSGGLAVVLDSGVL
                     NLSMVLPDAERGIAIERGYETMFTLIKDMFVDCNEVIEAKEIEDSYCPGSYDLSIQGK
                     KFAGISQRRMAKGVAVQIYLAIDGDQTTRSELIRDFYTISGKAKQTKYTFPDVNPNVM
                     GSLSDLMKNDISLNGTLVRLFNSLRHYAGELVSGTLTSEELDLFPAYYERLIARNDKV
                     LT"
     gene            complement(8489..8689)
                     /locus_tag="U0290_000702"
     CDS             complement(8489..8689)
                     /locus_tag="U0290_000702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300752.1"
                     /translation="MNSFWKIFFTVILGFIALNIVLDIVGITLHFLFPVLILGGIGYL
                     LYRMWGNSPKRSSRDNEDRYNW"
     gene            complement(8712..9035)
                     /locus_tag="U0290_000703"
     CDS             complement(8712..9035)
                     /locus_tag="U0290_000703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HEM2300753.1"
                     /translation="MKKGLFGLLAAIFVLTMVVIEFSAPIGSAANTYYVTIKNDGKEV
                     TKSKFKGYSFRESCLDNQGNSHKVNFMSTTQLKKNKQYKIVVQDNELLVQAKEINSVP
                     LASSK"
     gene            complement(9189..10850)
                     /locus_tag="U0290_000704"
     CDS             complement(9189..10850)
                     /locus_tag="U0290_000704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2300754.1"
                     /translation="MHKTARKMVVALSLLCLLALTACQSGNKGENEKVTSDKKSKVVN
                     IMETSGIPNASPTLADNSVSFRVINQIFEGLYRLDKNGKPALALAASEPEEKDGGKTL
                     IFKIREDANWSNGDPVTAHDFEYAWKKVVDPKTAAAYGPQMEEIVKNATQILKGEMSP
                     DELGIKALDDKTLQIELENPVPIFKELLTTGTFFPQNQAFVEKQGDRYGTKSDTLISN
                     GPYKLENWNGTNMTWDYVKNPTYWDKKNVPTKKIHVTVVKDTNAALNLYNTNKLDRVE
                     LDGEFVKQYKDDKNFHKEATGRSVYMKMNQGKDGVKTDLANLNLRRGLAMAIDKTGMV
                     NTLLANGSKALNGDVPGDIMFDPETKEDFRKQNGDLLKFDQQEATNAWKQGLKEIGKT
                     ELTLTLTSGDTSLQRKQTEFIQNQLEENLPGLTIKLKNVTNQASFQADVTQDFELLLG
                     GWGGDYQDPLTYLNLFLTNSPGNHTGFSDAKYDELVLGAKGKLSADPEKRWQALLEAE
                     QILLKDNAVLIPLYQGGRAYLQKSNLKNYTTYPIGSENYKWIEKN"
     gene            complement(10985..11599)
                     /locus_tag="U0290_000705"
     CDS             complement(10985..11599)
                     /locus_tag="U0290_000705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SdpI family protein"
                     /protein_id="HEM2300755.1"
                     /translation="MRKVGIFPSMIILFTVGISAVLYPLLPSEVAVHFGTDFSPDMFM
                     QKWLGLILIPFLMIMFTGTEYYGKEKVNQESLLEFEYCFRLLLVLLTIIQMSIIVYAL
                     GYDIPTGRFSLVTAGAFMFVVAAYIQYSKKLFKFLTMIGFKKIDAWSRNLLRKITTVT
                     LNIAGTICFILALFMRNDPSYLMLAMLMTMCVIVVGSGVYLNKK"
     gene            complement(11623..12255)
                     /locus_tag="U0290_000706"
     CDS             complement(11623..12255)
                     /locus_tag="U0290_000706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinamidase"
                     /protein_id="HEM2300756.1"
                     /translation="MKIAAFDIDAQKGFTPLCPDELPVSGGDKIVPELNFMASLASLR
                     IGSKDAHPQNAVWVVDSKDEMLAELEYPNADRTWVRHCEPGTKGFELLDGLPVVTDYD
                     YFIWKGMEPDIHPYGACYHDIVEQLSTGVLEYLREQKVDLVLVGGLAFDFCVKTTVIQ
                     LSRAGFSVLVYLPATRALSEQGFDETKEQLANTEKVQLIETREELVAYCQ"
     gene            complement(12256..12780)
                     /locus_tag="U0290_000707"
     CDS             complement(12256..12780)
                     /locus_tag="U0290_000707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrofolate reductase"
                     /protein_id="HEM2300757.1"
                     /translation="MSEKQVALYIAVSLDGYIADENGSVEWLESIDSEGDAGYEAFFD
                     NVDTVVMGRTTYQQIFSLTDTFPYSKKDVYVFSNTKAGTKDEYADFVAGTVDTWLNNI
                     DGEKIWLVGGAKLVQQFLKEKAIDRFVITIAPIILGKGIPLFEEDREHALELEEVTRF
                     GQFAQLTYKNLEEN"
     gene            complement(12783..13781)
                     /locus_tag="U0290_000708"
     CDS             complement(12783..13781)
                     /locus_tag="U0290_000708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase family
                     protein"
                     /protein_id="HEM2300758.1"
                     /translation="MKAVGLTRASTDFVDIEIDKPVPENHDLLVRIKAISINPVDTKQ
                     REATKLSGDEVRILGWDAVGEVVDTGSEVALFQTGQDVYFAGDVTRQGAYAEYTLIDE
                     RLVGLKPHNLNVEEAAAMPLTTITAWEALFDRLTITENDKGKSILIINGAGGVGSIAT
                     QLAAHAGLEVIATASRPETVEWTKSHGANYVINHRENIPEQLEELGFEQGVDFILCLH
                     NTSAHWDEMQEAIRPQGKICSIVELAEPVKMTLLKDKSATFSYEFMFTRSKYDTTDKI
                     RQHEILTEAAHMLDAGELTTTLNQVLSPVNAATIEEAHKIISSGKMIGKLVVKGFE"
     gene            complement(13878..14150)
                     /locus_tag="U0290_000709"
     CDS             complement(13878..14150)
                     /locus_tag="U0290_000709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300759.1"
                     /translation="MEEQVDLGHFLKKTFIALVAVTLVFIGVLAMFTIIGVIIAIPLL
                     KKASKMLLSKKEASDHTHSHGGKLKIKCPACHAKMKFKDSELLDEK"
     gene            complement(14199..15110)
                     /locus_tag="U0290_000710"
     CDS             complement(14199..15110)
                     /locus_tag="U0290_000710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM2300760.1"
                     /translation="MAHNHDHAHGHNHNHAHNANKKSLFISFILIATFMVVEVIGGIM
                     TNSLALLSDAGHMLSDAVALGLSLAAFKFGEKAASSDKTYGYKRFEILAAFLNGLTLV
                     GISVFIFYEAIGRFFDPPQVIGAGMMTISVIGLLINILVAWILMKGDTSENLNMRSAF
                     LHVLGDLLGSVGAIIAALLIIFLGWNIADPIASVIVAALILVSGWRVLKDAIHILMEG
                     KPANVDTEEIKTFFQQQDGVKEVHDLHVWAITSDFNALTAHLTVCEDADRDKILADIE
                     HYLQENFSLEHSTIQLEGNHAHHHHCN"
     gene            complement(15488..16315)
                     /locus_tag="U0290_000711"
     CDS             complement(15488..16315)
                     /locus_tag="U0290_000711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2300761.1"
                     /translation="MANVAIDTVITDMDGTLLVKKGDQIHPLNKEVLMEWQKNGKKLF
                     LATGRLDLAILPFIHELNIKTPVISCNGGLVRDFTTGEILYKSNIELDLIHTVLETLE
                     PLDVNYHIYTTERILGPTNTGKIAFFNELNKTLPENEQVPITLTTDPFSVLREGEFPL
                     KVLVIESDLEKRAEIKAALEGLPLSVLASASNLIDIMNEGIDKAKGLTYLAENGYINL
                     DSTIAFGDNENDVGMIELAEIGVAMENGIPLALEKADKIAKHHDIGGLGLFMQEEIL"
     gene            16430..17305
                     /locus_tag="U0290_000712"
     CDS             16430..17305
                     /locus_tag="U0290_000712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2300762.1"
                     /translation="MKKYFITIMILLFGALFLSACQKDDEVENSSPPKVDLKNEIPII
                     LIHGSGGDTHSLDEMADHLMNEYKSSNEAMSMSINSKGKITYQGKLTKDAKRPIIKFG
                     FDQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYFAEDYSNDNAVPT
                     LRKLVAIGSPFNDLDPDDNGEDLAFNKLPSNTPQLDYFIDKETKISTDLEVLSIAGAL
                     SEDNLTDGIVPTNSSLASRLFMPNNAKVYMEDLQVGESAIHQTLHETSESIEKTHWFL
                     EKSSPEKKEIKLISK"
     gene            17316..17609
                     /locus_tag="U0290_000713"
     CDS             17316..17609
                     /locus_tag="U0290_000713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM2300763.1"
                     /translation="MLHIQAKVQVKPDLVAEFLVEVNLVIQGSLSETENHGYELVHSV
                     ENANIFYILEKWTDEAAIQFHNGTEHYKRFKKNVPAFLAMPIEVDLLAPVERR"
     gene            complement(17525..17764)
                     /locus_tag="U0290_000714"
     CDS             complement(17525..17764)
                     /locus_tag="U0290_000714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300764.1"
                     /translation="MDGEQTIESLEVEEIVYEQIIRTKEGYTNTGKFIFTKTKMMLVA
                     KKFLLKKYYRRSTGASKSTSIGIAKKAGTFFLKRL"
     gene            complement(17833..18501)
                     /locus_tag="U0290_000715"
     CDS             complement(17833..18501)
                     /locus_tag="U0290_000715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300765.1"
                     /translation="MTLMMKNISKNYQDGEQVIEVLKNVSLEVAQGEFVAIVGPSGAG
                     KSTFLSIAGALLSPTEGEIAIGGKVLNDLTSKELTKVRLDKVGFIFQGANLIPYLNVR
                     DQLLVIAELSGEKGRGAKEKADELLKELGLTARENNYPESLSGGEKQRVAIARALMND
                     PDIILADEPTASLDANRGHKVVQMIANEVKRKNKAAIMVTHDERVLDLVDRVIRIEDG
                     YLKD"
     gene            complement(18501..19589)
                     /locus_tag="U0290_000716"
     CDS             complement(18501..19589)
                     /locus_tag="U0290_000716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2300766.1"
                     /translation="MFLALRELKHAKLRYILIGLIMVLIAWLVLFVTGLANGLANDNG
                     AAISSNKATYYVLQKDSDNRLTRSNLTASETDSVAKQVKKSESTNLGVQMGTITPPNK
                     DKKTDITYFGIDKTGFMKPAITEGTEPEKTKEVVADISLKESGYKLGSKLKDSATGEE
                     FTITAFTKNNTFSHSPVIFVGWDAWKLVHQTNQAAEGEYNAVALDVSESTAKNLSLGS
                     MELSSSKEVLQGIPGYSEEQGSLLMMIAFLFVIAAFVLAAFFYVITIQKINQFGILKA
                     VGARTAYLGRSIVTQVVFLSVVSLLIGNGLTFGLAAILPASMPFTLSPVLAIGCSALF
                     LVVAVIGSMLSLYRVAKVDALEAIGRAN"
     gene            complement(19668..21047)
                     /locus_tag="U0290_000717"
     CDS             complement(19668..21047)
                     /locus_tag="U0290_000717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM2300767.1"
                     /translation="MKSLYSRIVVTMLVVIISSSLLGFFFANIYYQIKLKPFNDEKTA
                     KIAEEVQQFYESNATISLNEYLENVGELGYELYLTDGAEKSTYYGGAFRKKDLPDKTI
                     KQVLDGETYHGIDSFDTGIFITGFFDNDVRNTIGVPVQADGKQLALFIRQDPEKQFGE
                     LRIFFAMILIFTSIISILLVLISGRYIVKPVVKLTNATKKIRKGNYDVAFEVRRKDEI
                     GQLADSFTKMASELKKSEASRQEFVANVSHELQSPLTSMQGFARLLGSGTLTEKEQAE
                     YLTVLSEETTRLSSLTKQLLTLASLDQESELRKKEPVHLDEQWRQLIQMTEWSWREKE
                     LTINLDLADVNYTGDAELLYQVWSNLLTNAIKFTPQGGNIKVHLYEKATYVFVEVQDS
                     GVGIGKEDMAKIFDRFYKANESRTREEGSSGLGLSICQKIITLHHGEITVQSSPEKGT
                     TFKVKLPKN"
     gene            complement(21044..21721)
                     /locus_tag="U0290_000718"
     CDS             complement(21044..21721)
                     /locus_tag="U0290_000718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2300768.1"
                     /translation="MKQILVVDDDRHILKLVGHYLRAEGFRVLEASDGVEAEKIVETE
                     QVHLAVIDVMMPNMDGFELCKKMRTSYPDIPVIMLTAKDALADKSRGFEVGTDDYVTK
                     PFEPEELIFRIRALLRRSNQASEVKINIGNITIDQKSYGIKIGNQERMIPVKEFELLY
                     QLASYPGRIFTREELIERIWQRDYDGSDRTVDVHIKRLRDHFDEEKDGIRIVTVRGVG
                     YKLEETT"
     gene            complement(21768..22553)
                     /gene="fdhD"
                     /locus_tag="U0290_000719"
     CDS             complement(21768..22553)
                     /gene="fdhD"
                     /locus_tag="U0290_000719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase accessory
                     sulfurtransferase FdhD"
                     /protein_id="HEM2300769.1"
                     /translation="MDIVSHQKIRRFEAGTFQEIESSVATEYPLTIYVNDQELVTIVC
                     TPEYLEDLVVGFLTSEGIVRGPQDIDSVDIIEATGHAKVSANFVNKFNAKYRGKRYIT
                     SCCGKSRENFYFQSDASLVNVKQNGSLQLTTDMIFRLMENFEQNSATFHQTGGVHNAA
                     LCSSAEIIYSRMDIGRHNALDKIYGRALQDGTSTEDKAIIFSGRISSEILVKTAKLGC
                     GIILSRSAPTELAINMAEELNITTVGFIRGDRLNVYSGFERIT"
     gene            complement(22615..23091)
                     /locus_tag="U0290_000720"
     CDS             complement(22615..23091)
                     /locus_tag="U0290_000720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1641 domain-containing protein"
                     /protein_id="HEM2300770.1"
                     /translation="MAEPISTIRDTKKTPEELEHERLEQMKADIAEQDSGFVEIVETV
                     KLLQESGALEALNSAIKARGDITKTFLNEWRKEPMTNAINNMMISSKLLTDTKPEQTE
                     EMIANLKNAAKKAEESAKKDEIMGMLAMMKALKDPDINRALRYGVTFLKEVGQTLK"
     gene            complement(23091..26078)
                     /gene="fdhF"
                     /locus_tag="U0290_000721"
     CDS             complement(23091..26078)
                     /gene="fdhF"
                     /locus_tag="U0290_000721"
                     /EC_number="1.17.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate dehydrogenase subunit alpha"
                     /protein_id="HEM2300771.1"
                     /translation="MGAKVSVQINGVARDVVEGTRILDYLNAEGIQHPHICYSEQIGP
                     IQSCDTCMCEVDGELVRACSTNLTDGMEIKTNSELAKDAQLEAMDRILENHLLYCTVC
                     DNNNGNCKVHNTTELLGVEKQERPYREKGYLNDFSHPFYRYDPDQCILCGRCVEACQQ
                     VQVNETLSIDWERSQPRVIWDDDRPANLSSCVSCGLCATVCPCNALMEKSMLGQAGFM
                     TGLDEDMLEPMIDMVKKVEPNYQTVFAVSEMEAAMRETRTKKTKTVCTFCGVGCTFEV
                     WTKDRKILKVEPTGEGPVNKFATCVKGKFGWDFVNSEKRITTPLIREGNEFVPASWED
                     AIHLVATKLREIQAKYGNDSIGFISSSKTTNEENYLMQKLARQVFETNNIDNCSRYCQ
                     APASDGLTRTVGIGADSGTVEDIETAGLVIIVGASPADGHPVLASRIKRAQKTRGQKL
                     IVSDLRKHEMAERSDLFMHPKQGTDFVWLTAVAKYMIDQGWHDEAFMENRISNVADYL
                     SFLEPFTLEYAEKETGLSVETLKKVAQMVYEADGTAVCWGMGVTQNIAGSHTSSAIAN
                     LLLVTGNFGRHGAGAYPLRGHNNVQGACDMGSLPNVLPGIQPLGNDEVRARFEEAYGV
                     SISPEPGLKNNEMLDAIEAGTLHSMYVIGEEMAWVDSNSNHVQEILASLDFFVVQDVF
                     LSKTAQFADVVFPAAPSLEKEGTFTNTERRVQRLYEVLEPLGDSKPDWWIIQEVAKAC
                     GKTDWNYDHPSEIMDEIASLAPFFAGVRYDRMQGFNSLVWPVSADGKDMPLLYEERFN
                     FPDGKAQFSTLPYIAPITFPEEYNLTLNNGRLLEQFHEGNLTDKSKGLDYKLPEVFVE
                     VSHELAKERDLESGSLVRLSSPYGRIKLRAVVTERMKGNEVYVPMHSVSSETAVNLLT
                     SSAGDVRTKTPAYKQTKVNLTVLEKTGKNPLPDHNPRNRKRFPQNGAEVARKWSREDY
                     QPISKVNCACGGNCGCGGKRRNH"
     misc_binding    26258..26506
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            26576..27418
                     /locus_tag="U0290_000722"
     CDS             26576..27418
                     /locus_tag="U0290_000722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S-adenosyl-l-methionine hydroxide
                     adenosyltransferase family protein"
                     /protein_id="HEM2300772.1"
                     /translation="MTKQLLVLQSDFGISDGAVSAMYGVINSVSLDLQIYDLTHQIPQ
                     FNIWEASYRLLQTVTYWPEDTIFVSIVDPGVGSKRRSVAVLTEDGHYIITPDNGTLTH
                     IAHYGTIKEVRLIDEEKNRLPKSGASHTFHGRDIFAYTAARLAAGVINFEDIGPSATP
                     DSIVSLSLSDSYLEGEQAFGTIDIIDRPFGNLWTNIRRTDFLQLGANYGDSIEVLIKH
                     HDRVVYKNFVTYSRSFADLRIGEALIYVNSLDNLGLGINQGSFVDAYSVGTGTSWKVT
                     LKKV"
     gene            complement(27468..28949)
                     /locus_tag="U0290_000723"
     CDS             complement(27468..28949)
                     /locus_tag="U0290_000723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HEM2300773.1"
                     /translation="MNSTAVERPVDVNGKSYSRSLLVVTMIIGAFVAILNQTLLATAL
                     PMIMDDLHITAATGQWLTTAFLLTNGIMIPITALLIEKISSKTLFITAMTVFTIGTII
                     ASVAGSFPVLLTGRIVQAAGAGIMMPLLQTIFLLIFPREKRGAAMGLMGLVIAFAPAI
                     GPTLSGWIVDSYDWRVLFLILIPIAVIDIILAFFGMKKVVKLTDTKIDFLSIVMSSIG
                     FGSLLYGFSSAGNDGWGDATVITMLIVGVVVIALFVWRQLVIDNPMLELHVFKYPVFS
                     LSVILGSIVTMAMIGAEIVLPLYIQTIRGESALQSGLLLLPGAIIMGIMSPITGIIFD
                     KIGAKWLTITGVTILTIGTIPFMFLTMDTPLWYIVVFYAVRFFGISMAMMPVSTAGMN
                     ALPNHLINHGSAVNNTIRQIAGSIGTAVLITVLTNVTKDNMPGKALMATDPASFAQKA
                     QDASLDGMRAAFMVAAIFAAIGMILSLFLKTKKQEPIVKEYTK"
     gene            complement(29050..29937)
                     /locus_tag="U0290_000724"
     CDS             complement(29050..29937)
                     /locus_tag="U0290_000724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2300774.1"
                     /translation="MKEKKQRIIKSAKEVFQKQGYLKTSVQDMVDAAGISKGTFYNYF
                     TSKEELAIVIFKQEYSVLHQRLEYTMGLDGTKKDNFTECLKIIIHFYTENGEILNITF
                     SQTMIDDDFNAFLQNVRLKNMEWVKNQLLEVYGKETEPYINDITMLLSGMAAMYVFAS
                     GSKNVDSGLIERAIPYVVRRLDALVKDILESGEIVFTEADTENLVPDQTMIRKKRLAK
                     LRGALEELNVGIENADIDDSDKWQYKESMNALVGEINNNEAPRDFMVQGTLLYLKQHV
                     PASLTKEVNKLEACVNGLL"
     gene            complement(30090..30162)
                     /locus_tag="U0290_000725"
     tRNA            complement(30090..30162)
                     /locus_tag="U0290_000725"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30127..30129),aa:Thr,seq:ggt)
     gene            complement(30187..30262)
                     /locus_tag="U0290_000726"
     tRNA            complement(30187..30262)
                     /locus_tag="U0290_000726"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(30227..30229),aa:Asn,seq:gtt)
BASE COUNT         8829 a         6702 c         5172 g         9567 t
ORIGIN      
        1 attaagtgca gcgccaacaa aatctttaaa caagctttgc ggacgatttg gacgagaaat
       61 gaattctggg tgatattgac aagcgacaaa ccaaggatga tcagctaatt caactacttc
      121 aactaaacga ccatctggac ttgttgcaga aacaatcata ccagcttctt ccatctgctc
      181 tctatattcg ttattaaact cataacgatg acggtgacgc tcttcaacaa gagttgtacc
      241 ataagcggcc tcggctttag taccttgctt aatacgcgct ggataaagtc ctaaacgaag
      301 tgttccgccc atgttttcga tgttcttttg ttctggtaat aaatcaatga tgttatgttt
      361 tgtttctggt tcgatttctg cagaatgagc tccttcaaga ccaagaacat tacgggcaaa
      421 ttcaacagtt gctagttgca ttcctaaaca aataccaaaa taaggcactt tgtttacgcg
      481 tgcatattca atagcagcaa ttttaccttc aatggcacgg tcgccgaaac caccaggaac
      541 taagatacca tcaacgtctt tcatgatttc agcaacattt tcttttgtta ctttttcgga
      601 atcaatccag tcaatttcga tttctgcatc atgatcatat cctgcatgac gaagtgcttc
      661 tgctacagaa aggtaagcat cttgcaagga aacatattta ccaactaggc caatacgaac
      721 ttttttggaa agatttttca cacgatgtac taagtttttc caatccgtca tttccgcttg
      781 tggtgcttct aattgtaagt gctcaaggac gatatcatcc attttttgtt tttgtagaga
      841 aagtggtacg ttataaagtg tttcttcatc gcgagattca ataacctcgg aagctttaat
      901 atcacagaat agcgcaatct tatctttcat ttcttgtgaa actggctgct ctgtgcgaac
      961 aacgataatg tttggttgaa ttcctaagct acgaagctct tttacactat gttgtgttgg
     1021 tttagttttc atttcgccag ctgctttgat gtaaggaatt aaagttgtgt ggatataaag
     1081 tacgttttct gcaccaacat cacttttaat ttggcgaatt gcttctaaga atggtaaaga
     1141 ttcgatatcc ccaactgttc caccaatttc agtgatgata atatctgaat tggtcatgcg
     1201 cgctgcacgg aaaacacggt cttttaattc gtttgtaatg tgtggaataa cttgcactgt
     1261 tccacctaag taatccccgc gacgttcttt tttaataact tccgagtaaa ctttaccagt
     1321 tgtcacgttg ctgtatttat ttaagttaat atcgataaaa cgttcgtaat ggccaaggtc
     1381 taggtccgtt tccgcgccgt catctgtcac ataaacttcc ccgtgttggt atggactcat
     1441 tgttcctgga tctacgttga tgtatggatc aaatttttga atggttacac taagtccacg
     1501 atttttcagc aaacgtccga gtgatgctgc tgtgattcct tttccgattg acgaaactac
     1561 gccacctgta acgaaaatat actttgtcat gttaaaaaaa tctactcctt cctgaaatga
     1621 aaaacttgca gggtctgacg attttcctgc tggggtggga aattgccaga taaaacaata
     1681 ttgtgattat ctctctagca cacaaatcac aatttcaagt attttgtaaa ccaaaataaa
     1741 aaacactccg cctactttta aaagtaaggg agcgctgatt ctcataaata tccgtcccta
     1801 taaaagggag cccaaataaa atactactaa tgatggcgat agaagtcaag tctttatttt
     1861 atgaaaccgc catcaatcca ttaagtaggc taaaaaaaat cagacagaca cttttccaca
     1921 aaaatggacg catctatctg attaaaatta gttattattt atcttctggg tcttctgtat
     1981 aatccccgtc cgtataatca tcttctacag ttgctaagtc gccttcgatt ccgtctggca
     2041 agtgatcatc gtcatcttcg tcttcatcaa gtaagacatc tgcaagagaa atttcttctt
     2101 caccaagctc ttccacgatt tcttcatcat cgtagtccac gtcatcatcc aagatttctt
     2161 catcttcatc gtcatcatcg tctgatttac gttttttctt cggtgttgtt tgtgtttgaa
     2221 cttcttcatc aatcgcatcc attggatacc atgcacgaag tccccacgtg ttgtttccta
     2281 gtgaaataaa gtttccatca atattcatat ctgtataaaa ttgaacaaga cgctccctta
     2341 tttctgcatc tttcaaacct aggaacgctt gaatctcttt cactaattca gggaaaagaa
     2401 tagtttcttt ccgctgttcc aaaataaaat gtgcaacatc aattaaagat agttcactac
     2461 gttcttcttg cgttaagttc tttaaatcca aaactggcac gccctttcta tcgtaattcc
     2521 aatttattta gctgttattt tttcgttcag cccaacttca ctattttaca tgttatttct
     2581 ggcaagtaca acctaaattt tcttaattac atcaattctt cttgactatt tgatatccga
     2641 tgtaaaagaa aaggatggcc attaaaagaa ttgggattga tccaagttga aagtcgtaga
     2701 gaatatagat tgcgacgcac agaaacacga aaagcagcgc caaaattatt aatcgcttca
     2761 tcatatgctc tccccgtttt ttcaattacc tatgtttcta ttaactttag tacattttgg
     2821 ttatgacgtc aacgagtaac ctataaattt aggatatcac attttttctg gtgctgatac
     2881 acctaaaagc gtcaaaccat ttctaagggt aatttgcgca gtcttaataa gtgctagtct
     2941 tgcttttgtt acttctaaat tatccatatc aagtacttta ttgctattgt agaaacggtg
     3001 gaaggaagac gctaaatcat ttaagtagcg aacgatacgg tgtggcgctc tttttgtagc
     3061 agcttccgca acaacatccg cgaactcacc taacactttt aataaatcat attctgcttc
     3121 tgtttgcagt aagctcatgt ctgcgtcttt tgttacctct agaccttgtt ctttaccaga
     3181 acgtaaaatg ctagaaattc tggcgtgcgc atattgtaca taataaactg gattatcatt
     3241 agatgtagat ttcgctaagc tcatatcaaa gttcatatgt gtatctgaac tacgcattgc
     3301 aaagaaatat cttgttgcat ccagtccaac ttcttcaatt aagtcacgca ttgtaactga
     3361 tttaccagta cgtttactca ttttaacttg aacaccgtct tcaaataagt gaactagctg
     3421 aatgatttct acttctaatt gatttggtga gtagccaagc gcttcaattg cagcacgcat
     3481 acgaggaata tagccgtggt gatcagctcc ccaaatatca attaacacat caaagccacg
     3541 ctctaatttg tttaagtggt acgcgatatc tggtaagaaa tacgtataac taccatctga
     3601 tttgattaaa acacggtctt tgtcatcttc aaaatcagtc gttcttaacc atgtcgcgcc
     3661 atcttgctca taaatatagc cattttcgcg taaacgttct aacgctggta atactttatt
     3721 ttcttcgtat aaagaagttt ctgagaacca ctcatcaaag gaaacgcgga attcttctaa
     3781 gtcagcgcgt aattttcctg tttcaaacgc taatgcatct acacggaaaa cggaacggcg
     3841 ctcttcttcg cttgtgtgca catatttatc gccgtattta gcagctaaat ctttcccaag
     3901 cgaaataata tccgcaccac ggtagccatc ctctgggaat tcagaatcta aacctagtgc
     3961 ttcaaagtaa cgcgcttctg ctgaaagaac taaattatta atttgatttc cagcatcatt
     4021 aatgtagtat tctcttgaaa catcaaatcc ggccattttc ataatatttg ctaacgagtc
     4081 gccaattgct gcgccacgag catgtcctaa atgcaagtca ccagttgggt tcgcggaaac
     4141 aaattcaatt tggaattttt ctcctttacc aaaatcagac tctccgtatt ttttatcttc
     4201 ggttaaaatc acaggaacta aatcagttaa ataagcatta tctaggtaga agttgataaa
     4261 acccggccca gcgatttcta cttctttaat taatttgttg tcttttttta gttctggaac
     4321 gatactttcg gcaatttggc gaggggcttt cttagctact ctagcaagtt gcatcgctat
     4381 attagtcgaa taatctccat gctttttatc ttttggtact tctagtaaaa tttctggtac
     4441 ttccgcttct tctaaaccaa ccgcttgaac aactccttgt ttgatatgtt caattaattt
     4501 gatttggttc tcttgcatga cattcattct gcgtcctcct ctattttcat taaaacagta
     4561 tatgagccaa tgtattcgcc gtggcttagc aaatcatatt gaaatgcgac ttcactcagt
     4621 acatcaggct tattttcata tagttcttcc attgatacta gttctgattc taattgtaat
     4681 ttccctgctc cggaatcaac agacgcagta cttctcctat tatctcggaa aaagtgcatt
     4741 ctcatattta cggcaccact tctcattaaa agtagttcgt tgtcagcaat ttttagaacc
     4801 gtacgaattg ttccagctaa ttgtttttcc tcataatgca gataacgatt gcctttatcg
     4861 cggtaaaaaa cacccgaaac agacatatcg gatttctctt ctgcatccat ctgacggatg
     4921 acattggtga tatgaatagt tacttttttt cgttccattt ggttggcagt catatcgctt
     4981 atttacccct ttccggtcag aagaatagac gcattatatt atagtgaaaa ataacatgaa
     5041 aagcaacagg ttaaaatgat gtcagaccaa atattgtcaa aatcacattt aaaacaaatg
     5101 gaataacggt attaaaaatt ggttgaatcg taaattctga aataggtgtt aatgcaacta
     5161 ctaagaaaat aagcatcgca tagcgttcaa gtggttccag cttagacctg gttgacattg
     5221 gcagaaactc cactagtatt tgatacccat caagcggcgg tagcggaatc aagttaaaca
     5281 caaacaagac tagatttaat tgcacaaaaa tcattaaaaa agtttccgca acggagccat
     5341 atgtaaagaa ggaataattt agaaataaag catataaccc cacaccaacc atcgcaagta
     5401 gtaaattact tactggtcct gcaagcgaaa caagtatact tccaaggcgg cgttttttta
     5461 atttaaatcg atttaccggg gtcggcttag cccaaccaaa gcctgcaatt aatatcatta
     5521 gcaaaccgaa taaatcaata tgtacaacgg ggtttaaaga gagtctcccc tcatttttag
     5581 ctgtatcatc tccaaatgcg agagcaacca aggcgtgtgc ccattcatga atagtaaaag
     5641 caattaataa tgtaactaaa acatacggta tcatttcgag tggatacgcg agaaaactag
     5701 gcataggagc ctcctttatc ttttattgag caatttttat atgctataat gaaaaaaacg
     5761 ttgatcgagg tgagaaaatg ccatttgtta ccattcaatt tttagaaggt cgtacggacg
     5821 atcaaaagaa agctttagtt agcgaagtga cggaagttgt tgccaaaaat ctaaaagcac
     5881 caaaagaaaa cattcatgtg attttagaag aaatgaaaaa aacggattac ggtgttggcg
     5941 gcgtaaggaa atctgatatt taagtgtgta agaagcaagg catttcgcct tgctttttta
     6001 tttttccttt aacgaatgcg catggatgag ggcgatcatt ctctcggtga ttgcttcttc
     6061 cacgtgtcca ctttcgataa aatcgagcgg ataatataat ttaatatcgg tccggcgctc
     6121 tcgaccaatc gcctcaacaa ccggagactc ggtcgataac tcacgcaatt ccccatttcc
     6181 catcaatagt ttaattgggt ctttgccact tcccactcca ggaagatagt aatcataagg
     6241 taaatcgctg gaagaatcaa ttactaaata ataagacgga tcaatatcgg ccttttcaag
     6301 aagtcctttt agttctgcgt aaagttctgc atcttctttc ggatcgtagt taatgtatcg
     6361 tagcaatctt ctattcaaaa agcgactaca taaatcactc aaaatcggat cttcttcctc
     6421 ttgccaaata gaaaaatagt acatcaacac aatatcatca agcacaatat aatcttttaa
     6481 actcacttca tttaaaaaga atggtagcac ttgaataggg gtagcttgaa attcatatcc
     6541 agcacaatat aactttttgg cacgctcaag gattttccat aatagcactt caccgctacg
     6601 actaactgga tgaaaataca cttgttgata catttgataa cgactcataa tataatcttc
     6661 taccgcatgc atgccagaat attttacaat aacaccattg ccatctgggc ttgggcgtag
     6721 aactcgcaaa atccgctcta aatcaaactt tccatagctc actccagtat aataggcatc
     6781 tcgcagcaaa taatccattc ggtcagcatc aatctgactc gaaatcaact tcaccaatgt
     6841 ttgattcgga taatttttct taataatagc agcaacttta agcggaaatt cttctcctgc
     6901 tctcatcaat attttattaa cttccgtatc tccaataatt atctcttgcg tgtatgattc
     6961 atggtccgtt ccaaatactt tttcaaaagc gtgagaaaat ggtccgtgac ctaaatcatg
     7021 caaaagcgct gcacacaatg ccaccatgcg ctcctctgga tccagttgtg gttcattcgc
     7081 aaatgtgaca tcgattattt gccgaacaat ttcgtaaacg cctaacgaat gattaaaacg
     7141 gctatgttcc gccccatgaa aagtaagtga agttgtcccc aattgatgga tacgccgcaa
     7201 acgctgaaac tcttttgtag caatcaaatc ccaaattatc ttatcagaaa catgtacata
     7261 tccatgaacc gggtctttga atactttctc ttcccttagt ttctctgtta aataactcat
     7321 acaacctcct cctctcaagt aagcacttta tcatttcggg caattaaacg ttcataatag
     7381 gctgggaaaa gatctaactc ttcagacgta agcgtaccag atacaagctc acctgcgtaa
     7441 tgccgcaaac tgttgaaaag gcgtactaac gttccattta aacttatatc atttttcatt
     7501 aagtccgaaa gcgaacccat aacattcgga ttcacatctg gaaaagtata ttttgtttgc
     7561 tttgcttttc cgctaatcgt atagaaatcg cggatcagtt ctgagcgagt agtttgatcc
     7621 ccatcaatag ctaaataaat ttggaccgct accccttttg ccattctacg ctgagaaata
     7681 ccagcgaatt ttttcccttg aatactaagg tcgtaactac caggacaata agagtcttct
     7741 atttcttttg cttcaattac ctcattacaa tctacgaaca tgtctttgat aagcgtaaac
     7801 atcgtttcat aaccacgctc aatcgcaatt ccgcgttctg catctgggag caccatagac
     7861 aaattaagta cccctgaatc aaggacaact gctaaaccac cggaatttct aactacaaca
     7921 cggtagcctt gttcttgtaa aaaggcaatt cctttatcta tatcaggcaa cttagaatct
     7981 tgaattccaa gggaaactgt tttttcatgc acccagccgc gaacagtaga tggcgccatt
     8041 cttgctccga ccgagcgaca tagcgtatca tctgtcgcaa atgattgaat ggcatcgaaa
     8101 gccggattaa tcgttgtatt atcaataaat cgccacacat cttgttttag taaggtgtct
     8161 tctatattca tctctatgtc ctccatgatt ttctttttgt tattatagca taccgacagc
     8221 aaaattagat gcaaatggct taaaatagcc atttaatcat gaataacaat ttttgagcgg
     8281 ttatttgact tttttacgct taatgttgaa aactatggct gtaatgattg atataacaac
     8341 tgatttgaga attatatctt ttttcatttt catcgcctca tttcctcctc ttattataac
     8401 aaacttacca tacaaaaaaa cctaacttct gtaaaagaaa ttaggttcaa tatatctaaa
     8461 agcctaggga gcttttttag caaatgtatt accagttgta gcggtcttca ttgtcgcggc
     8521 tcgagcgttt tggagaatta ccccacatac gataaagcag atatccaata ccacctagta
     8581 taagtactgg gaataagaag tgaagcgtga ttccaacgat atcaagtacg atattaagtg
     8641 cgataaatcc taaaataact gtaaaaaata ttttccaaaa actattcatg attttttcct
     8701 cttttctaat tttatttact acttgcaagt ggaacactgt ttatttcctt ggcttggacg
     8761 agtaattcat tgtcttgaac gacgattttg tactgtttat tctttttaag ttgtgttgtt
     8821 gacatgaagt taactttgtg actgtttcct tgattatcta aacacgattc ccggaatgag
     8881 taccctttaa attttgactt ggtaacttct tttccatcgt ttttgattgt aacgtaatat
     8941 gtatttgctg ccgatccaat tggtgctgaa aattcaatta caaccattgt taatacaaaa
     9001 attgcagcca gtaaaccgaa aagtcccttt ttcattgttt ttaccgtcct tttttgttga
     9061 taggtttatt atagaggaga tcaaaaaaag gaacgaacgg ctctaggctg aaaattggta
     9121 catcctaagt cttattttct ttcgggtata aaaatagagc ctagtttggt taactagact
     9181 cttttaaatt aatttttttc aatccatttg tagttttctg aaccgattgg atacgtggtg
     9241 tagtttttca ggttgctttt ttgcaagtac gcgcggccac cttggtatag cgggataagc
     9301 acggcgttat ctttaagtaa aatttgttct gcttctagta gtgcttgcca tcttttttct
     9361 gggtctgccg aaagtttacc cttggctcct aggactaatt catcgtattt agcatccgag
     9421 aagcctgtgt ggttccccgg gctgtttgtt aagaataggt tgaggtatgt gagcggatct
     9481 tgataatcgc caccccatcc acctagtaac agttcaaaat cttgtgtcac atctgcttgg
     9541 aaactcgctt ggtttgtgac attttttaat ttgattgtta gtccaggcag attttcttct
     9601 aattgatttt ggataaattc tgtttgtttg cgttgcaagg acgtgtcgcc acttgttaac
     9661 gtaagtgtta attcggtttt cccgatttct ttcaagcctt gcttccatgc gtttgtagct
     9721 tcttgttggt caaacttgag taagtcgccg ttttgtttac ggaaatcctc ttttgtctct
     9781 gggtcaaaca tgatatcacc gggaacatcc ccgtttaatg ctttagatcc atttgcaagt
     9841 agtgtattga ccatgccagt cttatcgata gccatcgcta aaccgcgacg taagtttaag
     9901 ttagctaaat ccgttttcac gccatctttg ccttggttca ttttcatata aacagagcgt
     9961 ccagttgctt ctttatggaa gtttttatca tctttgtatt gtttaacaaa ttcaccatca
    10021 agctctacgc ggtccaattt atttgtattg tataagttta aagccgcatt agtatctttt
    10081 acaacagtta catggatttt tttagttgga acgttctttt tatcccagta agtaggattt
    10141 ttaacgtaat cccatgtcat atttgttcca ttccaatttt ctaatttata cgggccgttg
    10201 gaaatcaatg tgtcgctttt agtcccataa cggtcacctt gtttttctac aaacgcttgg
    10261 ttttgtggga agaacgtgcc cgtcgttagg agttctttga atattggcac cgggttttct
    10321 agttcgattt gtagtgtttt gtcgtctaac gctttgattc caagttcatc cggtgacatt
    10381 tcacctttta aaatttgggt agcatttttg acgatttcct ccatttgcgg tccgtatgca
    10441 gcggctgttt ttggatccac cacttttttc caagcgtatt caaaatcatg cgccgtcact
    10501 gggtcgccat tggaccaatt agcatcttcg cgaattttaa aaataagtgt tttcccgcca
    10561 tctttttctt caggttcact ggcagctaga gcgagtgccg gtttcccgtt tttatctaat
    10621 cgatataatc cttcaaaaat ttgattgatt actcggaaac ttacgctatt gtctgcgagt
    10681 gttggacttg cattcggaat tccactcgtt tccatgatgt taaccacttt ggatttcttg
    10741 tcggatgtta ctttttcatt ttccccttta ttgccagact gacatgctgt aagtgctagt
    10801 aaacataata aactgagtgc cactaccatt tttctggctg ttttatgcaa tatttctcct
    10861 cctcttttgt aagcgctttt tgattacgca aaaaaatgac ggacttcctg ccaaattcgc
    10921 gcagaacttc cgccaccatt ataaaccgaa actgtatcaa ttgtaaataa aaactgttat
    10981 atttttattt cttattaagg taaactcctg acccaacaac aataacacac atcgtcatca
    11041 acattgctag cattaagtaa ctgggatcat tgcgcataaa caaagcaaga ataaaacaga
    11101 ttgtaccagc tatattaagt gtaacagttg tgatttttct aagtaggttt cttgaccatg
    11161 catcgatctt tttaaaacca atcatcgtta aaaatttaaa gagttttttc gagtattgaa
    11221 tgtaggccgc aacaacgaac atgaatgctc ctgctgtgac tagagaaaat ctaccagtcg
    11281 ggatatcgta acctagcgcg tatacaataa tactcatttg aatgattgtt aacagcacta
    11341 acaacagtct aaaacaatat tcaaattcca acaaactctc ttgattcact ttttcttttc
    11401 cgtaatattc cgttcccgta aacataatca ttaaaaaagg aatcagaatt aagccaagcc
    11461 acttttgcat aaacatatct ggggagaagt ccgtaccgaa atgcaccgcc acttcagaag
    11521 gtagtagcgg atataacaca gcagaaattc ctactgtgaa aagaattatc atactaggaa
    11581 atataccaac tttcctcatt cccctcacct cttccaatat aattactggc aataggcgac
    11641 aagttcctcc cttgtttcga taagttgcac tttctcggta tttgctaatt gctctttcgt
    11701 ttcatcaaaa ccttgttcag atagtgcacg tgtcgctggt aaataaacta atacagaaaa
    11761 gcctgcccta cttaactgta taaccgtagt tttcacacaa aaatcaaaag ctaaacctcc
    11821 aacaagaact aaatcgactt tttgttcccg taaatattct agaacacctg ttgaaagctg
    11881 ttcaacaata tcgtggtaac aagcgccgta cggatgaata tccggctcca tacctttcca
    11941 aataaagtaa tcataatcag tcacaactgg taaaccatct aataattcaa aaccttttgt
    12001 acctggttca cagtgcctta cccaagtacg gtctgcattt ggatattcga gttcagccag
    12061 catttcgtct ttggaatcca ctacccatac ggcattttgc ggatgggcgt ccttactacc
    12121 aattcgaaga gaagcaagac ttgccataaa attaagttct ggcacaattt tgtctccgcc
    12181 cgaaaccggt aattcatcgg gacaaagcgg cgtaaaacct ttttgtgcat caatatcaaa
    12241 agcagcaatt ttcatttaat tttcctccaa gtttttatac gttagttggg caaactggcc
    12301 gaaacgagtt acttcttcta gctctagcgc gtgctctcta tcttcttcaa agagtggaat
    12361 tccttttcct aaaataatgg gcgcaatcgt tatcacaaac cgatctatcg ccttctcttt
    12421 taaaaattgt tgcactaatt ttgcgccacc tacaagccag attttttcac catcaatgtt
    12481 attcagccat gtatcaacag tcccagctac aaagtcagca tactcatctt ttgtcccagc
    12541 tttcgtgttg gaaaaaacgt agacatcttt tttactgtaa gggaacgtgt cagtaagcga
    12601 gaaaatttgt tgatacgtcg tccggcccat tacaactgta tctacgttgt caaagaaagc
    12661 ttcataaccc gcatcccctt cactatcaat agattctaac cattcgacac ttccgttttc
    12721 atctgcaata taaccgtcca aactaaccgc gatatatagc gcaacttgtt tttcactcat
    12781 tattactcaa atcctttcac tactaatttt ccaatcattt ttccggatga gataattttg
    12841 tgagcttctt ctattgtcgc cgcgttcacg ggtgataaaa cttgatttaa tgtcgttgtt
    12901 aattcgcccg catctagcat atgagctgct tctgttaaaa tttcatgctg tctgatttta
    12961 tctgttgtat catatttcga acgagtaaac atgaattcat agctgaaagt agcactcttg
    13021 tcttttaaaa gagtcatttt cactggctct gcaagttcta caatagagca aattttccct
    13081 tgtgggcgaa tcgcttcttg catctcatcc cagtgagcac tcgtgttatg caaacataaa
    13141 ataaaatcaa ctccctgctc aaatccaagt tcttccagtt gttctgggat gttttctcgg
    13201 tggttgataa catagttcgc gccgtggctc ttagtccatt ctactgtttc tgggcgtgag
    13261 gccgtggcga tgacttcaag accagcatgt gcagctagtt gggtcgcaat agaaccaaca
    13321 ccaccagcgc cattaataat taaaattgat ttacctttat cattttcagt aatagttaaa
    13381 cgatcaaaca atgcttccca agctgtaata gttgtcagtg gcatcgcagc agcttcctct
    13441 acgttcaagt tatgtggttt caaaccaact aaccgctcat caattaaagt gtattctgcg
    13501 tacgctcctt gccttgtgac gtcacctgcg aaataaacgt cttgcccggt ttgaaataat
    13561 gcaacttcac tcccagtatc tactacttct ccaaccgcat cccaacctaa aatccgtact
    13621 tcatctccag atagcttcgt tgcttcacgt tgtttagtat ctaccggatt gatggaaatc
    13681 gctttaattc taactagtaa atcatggttt tctggtactg gcttgtcgat ttctatatcc
    13741 acaaaatccg ttgacgctct cgttaatcct acagctttca tttgacaaca cctctcgttt
    13801 ccttttcccg aatttcttaa aataatgcac atttagataa aaaagccttc tcaaactcac
    13861 tgagaaggct ttaaaactta tttttcgtcg agcaattcgc tatctttgaa tttcattttt
    13921 gcatggcagg ccgggcattt gattttcaac ttgccaccgt gtgaatgagt atggtcgcta
    13981 gcttcttttt tggaaagaag cattttgcta gcttttttta gtagcggtat agcgataatt
    14041 acaccgatga ttgtgaacat tgctagaacc ccgataaaca ctaaggttac ggcaactaaa
    14101 gcgataaaag tttttttcaa aaaatgtcct aaatcaactt gttcttccat ctaaaccaac
    14161 tcctctaatt gatactttaa tcatatcatg aagcggcatt aattgcagtg atgatggtga
    14221 gcgtgatttc cttcaagttg aatcgtacta tgttctaatg agaaattttc ttgcaaataa
    14281 tgctcaatat ctgccaaaat cttatctcgg tcggcatctt cgcatacggt caaatgagct
    14341 gtaagagcat tgaaatccga agtaatcgcc catacatgta aatcatgcac ttctttgaca
    14401 ccgtcttgct gttggaaaaa cgttttgatt tcttctgtat ccacattcgc tggttttcct
    14461 tccatcaaaa tatgaatcgc atctttcagt acacgccaac cactaactaa gataagtgcc
    14521 gcaacaataa cactcgcaat cgggtcagcg atattccagc caaggaaaat aatgagtaac
    14581 gcggcaataa tcgcaccaac agagccaagc aaatctccaa gcacatgcaa gaacgcacta
    14641 cgcatattca aattttcgct agtgtcacct ttcattaaaa tccaagcgac caaaatatta
    14701 ataagcaatc cgataacaga aatagtcatc attccagctc caattacttg tggcggatca
    14761 aagaagcgac caatcgcttc atagaatata aaaacagaaa tcccaacgag cgttaatcca
    14821 ttaagaaatg cagctaaaat ttcaaatctt ttatagccat atgttttatc ggagcttgct
    14881 gctttttcgc caaatttaaa tgcagctaaa cttaaaccta gcgccacggc gtcagagagc
    14941 atgtgccccg catcagaaag tagcgccaaa ctattggtca taattccacc aataacttcg
    15001 actaccataa atgtagcaat tagaataaaa ctgataaata atgatttttt gttggcatta
    15061 tgcgcatgat tatgattgtg tccatgagca tgatcgtggt tatgtgccat atgattactt
    15121 cccctctgta agtagctaat ttccttatat gcatatgtta gcatatatac attttaagtg
    15181 caaccattct tataaaaaaa cttccatttt tagattcata taaaatgaaa ctaacggaag
    15241 taattctacg agtacaagag tcatgtatcc agcaaatata aaaaagtcca ccaaaatgaa
    15301 attagcaggt aaatctacta aagaaattat acgagcgtta aacatcaaaa aactaacaca
    15361 acaaaaatta ggctaccaat ctcccattaa tttcaggaaa caagcagcct aatttaagtg
    15421 atttttattc cattctcatt tttttatgtc agtacattag tgaaataata tctaatagtt
    15481 ctttttctta taaaatttct tcttgcataa ataaccctag cccgccgata tcatgatgct
    15541 ttgcgatttt atctgctttt tctaaagcta gcggaatgcc attctccatt gctacaccaa
    15601 tttcggctaa ttcaatcata ccgacatcat tttcattatc cccaaaagca attgttgaat
    15661 caagattaat gtaaccattt tccgcaagat aagtgagacc ttttgcctta tcaattcctt
    15721 cattcataat atcaattaaa ttcgaggcag acgcaagaac agaaagtggc aagccttcta
    15781 aagctgcttt gatttctgct cgtttttcta aatctgattc aattacgagt acttttagtg
    15841 ggaattcacc ttcccgaagc acgctgaatg gatccgtagt taaagtaatt ggaacttgtt
    15901 cattttccgg taaagtttta tttaattcat tgaaaaaggc gattttgcct gtattggttg
    15961 gtccgagaat tcgctccgtt gtataaatat gataattaac gtccagcggt tcaagcgttt
    16021 ctaataccgt atgtatcaaa tccagttcaa tattactttt atataaaatc tctccagtag
    16081 taaaatcgcg tactaatccg ccattacaag aaatgactgg cgttttgata ttgagctcgt
    16141 ggataaatgg taaaattgct aaatccagtc gccccgttgc aaggaaaagt ttttttccgt
    16201 ttttttgcca ttccattaaa acttctttgt tgaggggatg aatttgatca ccttttttta
    16261 ctagtaatgt tccgtccata tctgtaataa ctgtatcaat cgctacattt gccaatagtt
    16321 ttcgcaccct tctaaatttc cgttattatg tacctcgatt atagacgagt ttcgcatgat
    16381 tgtcacgccg atatttggta tactaaatgg gaatggagga cgataattag tgaagaaata
    16441 ttttataaca atcatgattt tactttttgg cgcgttattt ctcagtgctt gtcaaaaaga
    16501 tgacgaggtt gaaaattctt ctcctcctaa agtagactta aaaaacgaaa tacccattat
    16561 tttaattcat gggagcggtg gcgatacaca ttctttagat gaaatggcag atcacttaat
    16621 gaatgaatac aaaagttcta atgaagcaat gtcaatgtca attaactcaa aaggaaaaat
    16681 cacataccaa ggcaagctaa caaaagatgc caaacgtccc attatcaaat ttggcttcga
    16741 ccaaaaccaa gcaactccag atgattggtc taaatggtta aaaatcgcaa tggaagattt
    16801 gaagtcacgt tacggtttca cacaaatgga cggagttggt cattctaacg gcggcttggc
    16861 tttaacttat tttgcagaag actactctaa tgacaacgct gtccctactc tgcgcaaatt
    16921 agttgctatt ggctctcctt ttaatgattt ggacccagac gataatggcg aagatttagc
    16981 ttttaataaa ttaccatcca acacccctca actagattat tttattgaca aggagactaa
    17041 aattagtact gacctagaag tactatccat tgctggagct cttagtgaag ataatttaac
    17101 cgatggtatt gtcccaacga atagttcact cgcttccaga cttttcatgc ctaataacgc
    17161 aaaagtctat atggaagatt tacaagttgg tgaaagtgct attcaccaaa cattgcatga
    17221 aacatctgaa agtatcgaaa agacacattg gttcttagag aaatcgagcc ccgaaaaaaa
    17281 agaaattaaa ttaatttcta aataggagga ataatatgct acatatacaa gcaaaagtcc
    17341 aagttaaacc tgatttagta gcggaattct tggtggaagt gaatttagta atccaaggct
    17401 cgctttcaga aaccgaaaat catggctacg aattggttca ctctgtagaa aacgcaaata
    17461 ttttctatat tctagaaaag tggactgatg aagcagcaat tcagtttcat aacgggacag
    17521 agcattataa acgtttcaaa aaaaatgtcc ccgctttttt agcaatgccg attgaggtgg
    17581 atttacttgc gccagttgag cgacgatagt atttttttaa caagaatttt tttgcaacta
    17641 acatcatttt cgtcttagta aagataaact tacctgtatt agtatagcct tcttttgtgc
    17701 ggattatttg ttcatacact atctcctcta cttcaagtga ttctattgtt tgctcgccgt
    17761 ccacattaaa tgggttccca ctttagaaaa taagcaaaaa ggattggctc gcatacgcga
    17821 gccaatcctt ttttaatcct tcaaatagcc atcttcaatc cgaattacgc ggtcaactaa
    17881 gtctaaaact cgttcatcat gcgtaaccat gatggcagct ttattttttc gttttacttc
    17941 attcgcaatc atttggacta ctttgtgacc acggttcgca tctaagcttg cggttggttc
    18001 gtccgctaaa ataatatcgg ggtcgttcat cagtgctcta gcaatagcga cacgttgttt
    18061 ttcaccaccc gataaacttt ccgggtaatt gttttcgcga gcagttaaac ctaattcttt
    18121 aagtaattca tctgcttttt ctttcgcacc ccgccctttt tcaccagata gttccgcaat
    18181 tacgagtaac tgatcacgga catttaagta cgggattagg ttcgcacctt ggaaaatgaa
    18241 tcctactttg tcgagccgca cttttgttaa ttctttgctt gtaaggtcat ttaacacttt
    18301 tccacctata gcaatttctc cttctgttgg ggataataag gcgcctgcga tagataaaaa
    18361 tgtacttttc ccggcgcctg aaggtccaac gattgcaacg aattctcctt gcgccacttc
    18421 taaagataca tttttcaata cttcgatgac ttgctcgcca tcctgataat ttttagaaat
    18481 atttttcatc attaaagtca ttagtttgcc ctcccaattg cttctaacgc gtctactttt
    18541 gctacacgat agagtgataa catcgatcca atgactgcta caacaaggaa taaggcagaa
    18601 cagccgattg caagtaccgg gctaagtgta aatggcatgc tcgccggtaa aattgctgca
    18661 agaccgaatg ttaagccatt accaattaac aaactgacaa ctgataggaa aacaacttgg
    18721 gtaacgatac ttcggcctaa ataggctgtt cgtgcgccaa ctgcttttaa aatcccaaat
    18781 tggttgattt tttgaatcgt aatgacgtaa aagaaagcag ctagaacaaa tgcggcgatg
    18841 acgaacaaaa aggcaatcat catcagtagc gatccttgtt cttctgagta gccagggata
    18901 ccttgaagca cttctttact agacgaaagt tccatggagc cgagtgatag gtttttagct
    18961 gtgctttcag aaacatctag cgctacggcg ttatattctc cttctgctgc ttggttcgtt
    19021 tgatgcacta atttccaagc atcccagccg acgaatataa ccggcgaatg gctaaatgtg
    19081 ttatttttgg tgaaggcggt aatcgtgaac tcttctcctg ttgcgctatc tttgagtttg
    19141 ctgcctaatt tataaccaga ctcttttaaa gaaatatcgg ctactacttc ttttgttttc
    19201 tctggctctg ttccttctgt gatggccggt ttcatgaagc ctgttttatc tataccgaaa
    19261 taagtaatgt ctgttttttt atctttgttg ggtggtgtga tcgtgcccat ttgcacgccc
    19321 aggttggtgc tttctgattt tttcacttgc ttcgctacgc tgtctgtttc ggacgcggtt
    19381 aaattggacc tcgttaagcg attatccgag tctttttgta aaacataata agttgcttta
    19441 ttggatgaaa tggctgcccc attgtcgttt gcaagtccat tcgcaagtcc cgttacaaac
    19501 aaaacaagcc atgcgattaa caccataatt aatccaatta gaatatagcg taattttgcg
    19561 tgttttaatt ctcttaatgc caaaaacatt ccgttcaact ccttctaaga tcttatcctt
    19621 agtttaaaga agttttgtaa acggaatgtg aatcggattt tacaaattta gttttttggt
    19681 agtttgactt tgaatgtcgt gcctttttcg gggctacttt gcacggttat ttcgccgtga
    19741 tggagcgtga taattttctg gcaaatggat aatccgaggc cactcgagcc ttcttctcgg
    19801 gttcggcttt cgttagcttt ataaaaacgg tcaaaaatct tggccatatc ctccttacct
    19861 atgccgacac cgctatcttg aacttctaca aaaacatacg tcgctttttc ataaaggtgg
    19921 actttgatat tcccgccctg tggtgtgaac ttaatcgcat tagttaacaa attggaccac
    19981 acttgataaa gtaattcagc atcacccgta tagtttacat ctgctaagtc taaatttatt
    20041 gttagttctt tttcgcgcca actccactcg gtcatttgga ttaattgacg ccactgctcg
    20101 tctaagtgaa ctggctcttt ttttcgcaac tctgattctt ggtcaagtga agcgagtgtg
    20161 agtagttgtt tggttaagga agatagacgt gttgtctcct ctgataacac ggttaaatat
    20221 tcggcttgtt ctttttcggt tagtgttcca gaacctaaaa gtctcgcaaa gccttgcatg
    20281 gatgtgagcg gagattgtag ttcatgagaa acattggcga caaattcttg acgggaagct
    20341 tcagattttt tgagttcact agccattttc gtaaacgagt ctgccaactg cccaatttca
    20401 tccttacgcc gaacttcaaa ggctacatca taattgcctt tacgtatttt tttcgtcgca
    20461 ttcgtcaact tcacgacagg tttgacaata tatctgccac taataagaac caacagaata
    20521 ctgatgatgg atgtgaaaat aagtatcatc gcgaaaaata ttcgaagttc cccaaattgt
    20581 ttttccgggt cttggcgtat gaatagcgct agttgtttac catcagcttg gaccgggaca
    20641 ccaatggtat ttcgcacatc attatcaaaa aagcctgtga tgaaaatgcc tgtatcaaac
    20701 gaatcaattc catgatatgt ctctccgtcc agtacttgct tgattgtctt atccggtaaa
    20761 tcttttttcc gaaaagcgcc accataataa gtggattttt ccgcgccatc tgtcaaatat
    20821 aattcgtatc ccagttcgcc cacattttcc aagtactcgt ttaaagaaat cgtagcattt
    20881 gactcataaa attgttggac ttcctccgct attttggcag ttttttcgtc attaaaaggt
    20941 tttaatttta tttggtaata aatgtttgca aagaaaaagc cgagcaaact actggaaata
    21001 atgacgacaa gcatcgtgac aactattcga ctatataacg atttcatgtt gtctcctcca
    21061 atttataacc aacgccgcgc accgtaacaa ttcgaatacc atccttttct tcatcaaaat
    21121 ggtcccgcaa tcgtttaata tgtacatcca ctgtacggtc actaccatca taatcacgtt
    21181 gccaaatccg ctcaattaat tcttctcgag taaaaatccg gccaggatag cttgctagct
    21241 gatataaaag ctcaaattct ttcacgggaa tcattcgttc ttggttgcca atttttatac
    21301 catagctttt ttgatcgata gtaatatttc cgatattaat tttgacttcg ctcgcttgat
    21361 tagaacgccg tagcaacgca cgaattcgaa agattagctc ttctggttca aagggttttg
    21421 tgacataatc atctgttccc acttcaaaac cgcgtgattt atccgccagc gcatctttgg
    21481 ctgtcaacat aataacaggg atatcaggat aacttgtgcg catttttttg caaagttcaa
    21541 aaccatccat gttgggcatc atcacatcaa ttacagctaa atgaacttgc tctgtttcaa
    21601 ctattttttc tgcttctacc ccatcgcttg cctcaagtac acggaagcct tctgcacgca
    21661 aatagtggcc cacaagttta agtatatgcc gatcatcatc tactactaat atttgtttca
    21721 ttttcaccgc tcaccttact gtcctatttt actgcatcat atcaaactta cgtgattcgt
    21781 tcaaatccag aatagacatt taacctatca ccacgaataa agccaacggt tgtaatattt
    21841 aattcttcgg ccatattaat cgccagttcg gttggggcag aacgagacaa aataattccg
    21901 caacctagtt ttgctgtttt aacgaggatt tccgaagaaa tgcgcccact aaaaataatt
    21961 gccttatctt cagtggatgt tccgtcttgc aaggcacggc catatatttt atctaaggca
    22021 ttatggcgac ctatgtccat cctgctgtat ataatttccg ctgaactaca tagagccgca
    22081 ttatgcacac ccccagtttg atggaatgta gcagaatttt gttcaaaatt ttccattaag
    22141 cggaaaatca tgtcggttgt tagttgtaga cttccatttt gcttcacatt gacgagtgag
    22201 gcgtctgatt ggaagtagaa gttttcccga gacttgccgc aacacgaggt aatgtagcgc
    22261 ttgccgcgat acttggcatt gaatttgttc acaaaattag cgctaacctt ggcgtgtcca
    22321 gtcgcttcga tgatatccac ggaatcgatg tcttgaggac cccgaacgat gccttccgat
    22381 gtcagaaagc ccacaactaa atcttccaga tattctggcg tgcagacgat ggtcacgagt
    22441 tcttggtcgt taacgtagat agttagcgga tactcggtcg caacacttga ttcaatttct
    22501 tgaaaagtgc ccgcttcaaa acgacggatt ttttggtgcg aaacaatatc catcaaaaac
    22561 cactcctctc taaactgaaa cagcgacaca tcttagtctc gctgtttcgt ctacttattt
    22621 taatgtttgc ccaacttctt ttaaaaaggt cacaccatac cggagtgcgc ggttgatatc
    22681 ggggtctttc agcgccttca tcatcgctaa catgcccatg atttcgtctt ttttcgcgct
    22741 ttcttctgct tttttcgcag catttttcaa attagctatc atttcctcgg tttgctctgg
    22801 ttttgtatca gtcaatagct tacttgaaat catcatgtta ttaatcgcat tcgtcatcgg
    22861 ttccttacgc cattcattca gaaacgtttt cgtaatatcc ccgcgcgctt taatcgcact
    22921 attcaaagct tcaagtgccc ccgattcctg tagtaacttt accgtttcta ctatctctac
    22981 aaaaccagaa tcttgttcag caatatccgc tttcatttgt tctaaacgtt catgttccaa
    23041 ttcttccggg gtcttttttg tatcacgaat cgttgaaatt ggttctgcca tcagtgattc
    23101 ctccttttcc caccacaccc gcagttacca ccacaagcgc agttcacttt agaaatcggt
    23161 tgataatctt ctctcgacca tttgcgcgct acctcagccc cattttgcgg gaatctttta
    23221 cgattacgtg gattgtggtc tggaagtggg tttttccctg ttttttcaag tacagtgagg
    23281 ttcacttttg tttgtttata tgccggtgtt ttcgtccgaa catctcccgc gcttgaagtc
    23341 agtaagttga ccgcggtttc gctactcaca gaatgcattg gcacatagac ctcattccct
    23401 ttcatccgct cagtcacaac ggcacgaagc ttgatgcggc cataaggcga acttagacga
    23461 acgagcgaac cactttctaa atcgcgttct ttggctaatt catgtgatac ctctacaaac
    23521 acttccggta atttataatc caaccctttc gacttatctg tcaaattccc ctcatggaac
    23581 tgctccaata aacgcccatt attcagcgtt aaattatatt cttctgggaa agtaatcggt
    23641 gcaatatacg gtaacgtcga aaattgcgct ttgccgtccg gaaaattaaa tcgttcttca
    23701 taaagtaacg gcatatcctt cccatccgcg ctcactggcc atacaaggct gttaaatcct
    23761 tgcatccggt cataacgaac ccctgcaaaa aatggtgcta aactagcaat ttcgtccata
    23821 atctcgctcg gatgatcata attccagtcc gttttgccac acgctttcgc aacttcttga
    23881 ataatccacc agtctggctt cgaatctcca agcggctcta acacctcata aagtcgttga
    23941 acacggcgct ctgtattggt aaatgttcct tctttttcaa gagaaggagc tgctgggaaa
    24001 acaacatctg caaattgtgc tgtttttgat aagaacacat cttgaacaac aaagaaatca
    24061 aggctcgcaa ggatttcttg cacatgattt gagttagagt ccacccaggc catttcctca
    24121 ccaataacat acatagaatg aagtgttccc gcctcaatag catcaagcat ttcattgttt
    24181 ttcagccctg gttctggtga aattgatacc ccataagctt cttcaaaacg agcacgaacc
    24241 tcatcatttc caagcggttg aattccagga agaacgttag gtagtgaccc catatcgcaa
    24301 gcaccttgca cattattatg ccctctaagc ggataagcgc ccgcaccgtg tcttccgaag
    24361 ttcccagtta caagaagtag gttagcgata gcagacgatg tatgtgatcc agcaatattt
    24421 tgcgtaactc ccattcccca acaaaccgct gtcccgtctg cttcataaac catctgcgcc
    24481 acttttttca atgtttctac tgatagtcct gtttcttttt ccgcatattc caatgtaaat
    24541 ggttctaaaa atgatagata atctgctaca ttgctaatcc tattttccat aaaggcttca
    24601 tcgtgccatc cttgatcaat catatatttc gcaaccgctg ttaaccaaac aaaatcggtt
    24661 ccttgttttg gatgcatgaa taaatcagaa cgctctgcca tttcgtgttt tcgtaaatca
    24721 gaaacaatca gcttttgacc gcgtgtcttc tgagctcgct tgattctgct agcaaggact
    24781 ggatgaccat cggctggtga tgcgccaaca ataatgacaa gtccggccgt ttcaatatct
    24841 tccactgtcc ccgaatccgc gccaatccca actgtccgag tcagcccatc cgaagcaggc
    24901 gcctgacaat aacgtgaaca attatcaata ttattcgttt caaaaacctg ccgcgccaat
    24961 ttttgcatca aatagttctc ttcattggtt gttttagaag aactaataaa tccaatagaa
    25021 tcatttccat atttagcctg aatttctcgc agtttggtcg caactagatg aatcgcatct
    25081 tcccagctcg ccggcacaaa ttcattaccc tcgcgaatga gcggcgtcgt aatccgtttc
    25141 tcactattga caaaatccca accaaatttc cctttcacac acgtagcaaa tttgttcaca
    25201 ggaccttctc cggttggctc gactttcaaa attttgcgat ccttcgtcca cacctcaaac
    25261 gtacaaccaa ccccgcagaa agtacaaact gtcttcgttt tcttcgtccg cgtttcccgc
    25321 atcgctgctt ccatttccga cacagcaaag acggtttgat aattcggctc gacttttttc
    25381 accatatcaa tcatcggttc tagcatatct tcgtctaagc cagtcataaa gccagcttgg
    25441 ccaagcattg atttttccat caacgcgtta caaggacaca ccgtcgcaca cagcccacaa
    25501 gaaacacagg acgataaatt cgctggacga tcatcatccc aaataaccct tggctgacta
    25561 cgttcccaat caatcgaaag tgtttcattc acttgtactt gctgacacgc ctccacacag
    25621 cgcccacaaa gaatacattg atccggatca taacgataaa acggatgcga aaaatcattc
    25681 aaatagcctt tttcgcggta aggacgttct tgtttttcca caccaagcag ttccgtcgta
    25741 ttatgtactt tgcaattacc gttattgtta tcacaaaccg tacaatacaa taaatgattt
    25801 tccaaaatcc tgtccatcgc ttctaattgc gcatctttcg ctaattcaga attagtttta
    25861 atttccatcc cgtctgtcag attcgtgctg cacgcccgca caagttcccc atcaacctcg
    25921 cacatacacg tatcacaaga ttgaattggt ccaatttgct cactataaca aatatgcgga
    25981 tgctgtattc cttctgcatt taaatagtcc agtattcgcg ttccttccac cacatcccgc
    26041 gccacgccat taatttgcac cgatactttt gcgcccatca cattacctcc tatatagaga
    26101 aagcgtttac aatttccgct tatattataa cagttcttac ttaaaaatca cagtaatacg
    26161 gcaattgata atcgttctca aacactgcta ctatgcgatt tctctcacaa ggctaacgaa
    26221 ttcattgaca cttatccaac ttttctgtat tctttattac aaagctacga cgagaaaagt
    26281 acgacgtccg ttttttccaa aagagagttc ccactgctga aaaggaacaa aaaacaacgt
    26341 ccgaaaatgg cctctgagtt ttgtcgctga aaataagtaa gcaacaacgg gtttggtgtc
    26401 cgttatcaag caccctaagt attttatgta aatgcttatt tgaggttttc agtgcaagct
    26461 ggaaataaat taaggtggta ccgcgtgaaa ttttctcgcc cttattccaa gatatttttt
    26521 tggataaggg cgagttttat tttaccctaa attgctcgaa atggaggatt tcaaaatgac
    26581 aaaacaacta cttgttttac aatctgattt tggtattagt gatggtgcag ttagcgccat
    26641 gtacggcgtg attaatagcg ttagcctaga tttgcaaata tacgatttaa cgcatcaaat
    26701 tcctcaattt aatatttggg aagcatcgta tcgtttactc caaacggtta cttattggcc
    26761 cgaagatacc atttttgttt cgattgttga tcctggagtt ggttcgaagc gtcgaagtgt
    26821 cgccgtttta acagaagatg gtcattatat tattacacca gacaacggaa ccttaaccca
    26881 tatcgcgcat tacggaacaa ttaaagaagt tcgactgata gatgaagaaa aaaatcgcct
    26941 accaaaatca ggtgcatccc atacatttca cggtcgagat attttcgctt ataccgcggc
    27001 taggctcgca gccggggtga ttaattttga agatatcggt ccatcagcta ccccagactc
    27061 cattgtttct ctaagtctaa gtgactccta cttagaaggc gagcaagctt ttggcacaat
    27121 tgatattatt gaccgtccat tcggtaatct ttggacaaat attcgccgaa ctgatttctt
    27181 gcagctaggt gctaactatg gcgattccat cgaagtcctc atcaaacacc acgaccgagt
    27241 agtttataag aatttcgtta cttatagccg ctcatttgcc gacttacgga ttggcgaagc
    27301 gctcatctac gtcaattcac tcgacaacct cggactaggt atcaatcaag ggtccttcgt
    27361 agacgcttat tcagtcggca ccggcaccag ctggaaagtc acccttaaaa aagtataaaa
    27421 aacagggtca aacatccaaa ttggaagttt gaccctgttt cattttttta tttcgtatat
    27481 tctttgacga ttggctcttg ttttttggtt ttcaggaata aacttaagat catcccaata
    27541 gccgcaaaaa tcgctgcaac cataaacgcc gcacgcattc cgtccaaact agcatcttgc
    27601 gctttttgag caaaactagc aggatccgtt gccataagcg ctttacctgg catattatct
    27661 ttcgttacat tcgttagcac tgtaataagt accgccgtcc caatcgaacc agcaatttgt
    27721 cgaatcgtat tatttaccgc cgaaccgtgg ttaatcaaat ggttaggaag tgcattcata
    27781 cccgctgtcg aaactggcat catcgccatt gaaatcccga agaacctcac agcataaaat
    27841 acaacaatat accaaagcgg cgtatccatc gttaagaaca taaatggaat tgtaccgata
    27901 gtcaaaatgg taaccccggt aatcgtcaac catttcgccc caattttatc gaaaataata
    27961 cccgtaattg gactcattat ccccataata atcgcacccg gaagtaataa cagacctgat
    28021 tgaagcgccg actccccgcg aattgtttga atatataaag gcaatacaat ttccgcacca
    28081 atcattgcca tcgttacaat cgaaccaaga ataacagaca atgaaaatac tggatattta
    28141 aacacatgta gttcaagcat tggattatca ataactagtt ggcgccaaac aaataatgca
    28201 ataacaacga caccaacaat caacatcgtg ataaccgttg catctcccca accatcatta
    28261 cctgctgaac taaatccata aaggagtgaa ccaaaaccaa ttgaagacat tacaatggaa
    28321 agaaaatcga tttttgtatc agttaatttt actacttttt tcattccaaa gaacgctaga
    28381 attatatcga taaccgcgat tggaattaaa ataaggaata atacgcgcca atcatacgaa
    28441 tccacaatcc aaccagacaa agttggccca attgctggag caaacgcaat aacaagtccc
    28501 atcagcccca tcgctgcccc acgtttttca cgagggaaaa tcagcaagaa gattgtttga
    28561 agcaacggca tcataatccc cgcaccagct gcttgaacga tacgaccagt aagtagtacc
    28621 gggaaagaac ccgccactga cgcaataatg gtaccaattg taaatactgt catcgctgta
    28681 ataaataaag tttttgaact aattttttca attaaaagtg ccgtaatcgg aatcataatc
    28741 ccatttgtta gcaagaaagc cgtcgtcaac cattgccctg ttgctgctgt aatatgcaaa
    28801 tcatccataa tcatcggcag tgccgtcgct agtaacgtct gattcaagat cgccacaaac
    28861 gccccaataa tcattgtaac tactaataaa cttctactat aagatttccc gttaacatca
    28921 acgggccgtt ctactgctgt actattcaaa attaataccc cttcccatgt ggaaatttcc
    28981 agatgaataa tagaagtata ataaaaaaag accaacaagt caacaaaaag tgactggtca
    29041 gtctaattat tataaaagcc cgttcacaca agcttctaat ttatttacct ctttggtcaa
    29101 acttgctggt acatgttgtt taagatacaa caatgttcct tgaaccatga aatctctagg
    29161 cgcctcatta ttgttaatct ccccaacaag cgcgttcatg gattccttat actgccattt
    29221 atccgagtca tcaatatccg cattttcaat cccgacattt aactcctcca gcgcgccccg
    29281 cagtttagct agtcttttct ttctaatcat agtttgatcc ggcaccagat tttctgtgtc
    29341 cgcttccgta aacacaatct ctccgctctc caaaatatcc ttcacaagtg catcaagcct
    29401 tctcaccaca taaggaatag cccgctcaat caatcctgaa tcaacattct tgctaccact
    29461 agcaaagaca tacattgccg ccatcccgct aagcaacatc gtaatatcat ttatataagg
    29521 ctccgtttcc ttcccataaa cctctaacaa ctgattttta acccattcca tattcttaag
    29581 tcgcacattc tgcaagaacg cattaaaatc atcatcaatc atcgtctgag aaaacgtaat
    29641 attcaagatc tccccatttt ccgtataaaa atgaataata attttcaagc actccgtaaa
    29701 attatccttc ttcgtcccat ctagccccat cgtatactcc aaacgctgat gcaatacaga
    29761 atactcctgc ttaaaaatca caattgccag ttcctctttc gaagtaaaat aattataaaa
    29821 agtcccttta gaaatcccag ctgcatcaac catatcttgt acagacgtct tcaaataccc
    29881 ttgtttttga aacacctctt tagccgactt aataatccgc tgcttcttct ccttcaaaaa
    29941 aacaccccac ccgttctgtt attataccca tagtataatc gatttatact acctattcaa
    30001 gatatccata ataaatatca ttattctttt aaacaataaa aaaagcctcg catactagcg
    30061 aaacatacaa attatccata tattatttaa gccacttgtc ggatttgaac cgacgacccc
    30121 ttccttacca tggaagtgct ctaccaactg agctaaagcg gcagcaaagc ctttcaaata
    30181 aaaaaatggc tccacaggca ggactcgaac ctgcgaccga tcggttaaca gccgattgct
    30241 ctaccaactg agctactgtg gaataataaa
//
LOCUS       DASDYO010000018        29679 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.018, whole genome shotgun sequence.
ACCESSION   DASDYO010000018 DASDYO010000000
VERSION     DASDYO010000018.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 29679)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 29679)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..29679
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.018"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(243..1139)
                     /gene="lipA"
                     /locus_tag="U0290_000727"
     CDS             complement(243..1139)
                     /gene="lipA"
                     /locus_tag="U0290_000727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine/lipid phosphatase LipA"
                     /protein_id="HEM2300775.1"
                     /translation="MKHWVKVTGAGVLSATLLLGGCGAQSEEKAEANVKTEQTVKPGS
                     QIKLEGAVNVRDLGGYKTTDGLTIKPHKLIRSAELANLSDSDKKKLVNTYDLSHIVDF
                     RTSSEVAAKPDPKLTDVDYTHDSVMKDNGASTSTQDLTASLAKMDNPETFLINANKSF
                     ITDETSIQAYKDFFDILLANQDGSVLWHCTAGKDRAGFGTALVLSALGVDKNTVINDY
                     MLSNKYRALENKKAIEAVAAKTDNKKVIDGMTAVMEVRESYINAAFDEIDAKYGSMDN
                     FLKEKLGLTDAKKEQLKKAYLY"
     gene            complement(1282..2634)
                     /gene="ffh"
                     /locus_tag="U0290_000728"
     CDS             complement(1282..2634)
                     /gene="ffh"
                     /locus_tag="U0290_000728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle protein"
                     /protein_id="HEM2300776.1"
                     /translation="MAFEGLAGRLQETMNKIRGKGKVNEADVKEMMREVRLALLEADV
                     NFKVVKQFIKTVSERAVGADVMKSLTPGQQVIKIVQEELTSLMGGEESKIGTADRPPT
                     VIMMVGLQGAGKTTTSGKLANLLRKKYNRKPLLVAADIYRPAAIKQLETLGKQLDMPV
                     FSLGDQVSPVEIAKQAIAKAKEEHLDYVIIDTAGRLHIDETLMDELKQVKEIATPTEI
                     LLVVDSMTGQDAVNVAQSFNEQLEITGVVLTKLDGDTRGGAALSIRSVTGKPIKFIAT
                     GEKMEALETFHPDRMASRILGMGDVLSLIEKAQTDVDTEKMKAMEQKMKDNSMTLDDF
                     LEQLQQVKQMGPLDELLKMMPEANKMKGLDNMNVDDKQLGHIEAIIKSMTKNEKDNPD
                     IINASRRKRIARGSGRPVQEINRLLKQFGEMKKMMKQMTGGGKGKKGKNPFGNFKMPF
                     "
     gene            complement(2647..2979)
                     /locus_tag="U0290_000729"
     CDS             complement(2647..2979)
                     /locus_tag="U0290_000729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465327.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative DNA-binding protein"
                     /protein_id="HEM2300777.1"
                     /translation="MFEKTNRMNLLFDFYQELLTTKQKAYVSFYYLDDYSLGEIAEEF
                     EVSRQAIYDNIKRTEESLEKYEEKLGMLKKYQQREKLFSQLEAQLTKKNFLDEQVKDT
                     LEQLKNID"
     gene            complement(3092..4078)
                     /gene="ftsY"
                     /locus_tag="U0290_000730"
     CDS             complement(3092..4078)
                     /gene="ftsY"
                     /locus_tag="U0290_000730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal recognition particle-docking protein
                     FtsY"
                     /protein_id="HEM2300778.1"
                     /translation="MTFFKKLKDKITQQTDSVSGKFKDGLSKTRGNFSGKINEMVARY
                     RKVDEDFFEELEEILIGADVGFETVMELVDTLRREVQLRNISDPKDVQEVIVEKLVEI
                     YQGDEKEDEALHIEEDGLTVILFVGVNGVGKTTSIGKMAHRFKQEGKKVMLAAGDTFR
                     AGAIDQLEVWGERTGVDVIKQAEGSDPAAVMFDAVQAAKARKADVLLCDTAGRLQNKV
                     NLMNELEKVKRVITREIPNAPHEVLLVLDATTGQNAFVQAKQFKETTDVTGIILTKLD
                     GTAKGGIVIAIRNELDIPVKFVGLGEQMDDLQAFDANEYVYGLFADMVDNEK"
     gene            complement(4093..7653)
                     /gene="smc"
                     /locus_tag="U0290_000731"
     CDS             complement(4093..7653)
                     /gene="smc"
                     /locus_tag="U0290_000731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465329.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosome segregation protein SMC"
                     /protein_id="HEM2300779.1"
                     /translation="MLLKRLEMNGFKSFADKVAIDFVPGMTAVVGPNGSGKSNITEAI
                     RWVLGEQSAKSLRGGRMGDVIFAGSDTRKPINFAEVSLILENEDHFLPLDYSEVAVTR
                     RIYRNGDSEFLINKENCRLKDIVDLFMDSGLGRESFSIISQGKIDEILNSKPEERRSI
                     FEEAAGVLKYKHRKKQAENKLFETEENLNRVQDILYELEGQLEPLEMQASIAKDYLFQ
                     QEELEKYEVTLLASEISSLTEKLAEVRKEFGENQTVLIKLREELHAEEAVISREKHAL
                     NETDIALDNLQERLLVETEKLEQLEGERNLQLERKKHSSENEQVYAETLAAITEKITA
                     LEEQKEVLSSSKLEKETALEIAVKAKKELEVTLAKYDDLSEEAIENRKSDYIDLRHTQ
                     TTINNDLGYIERQIGQITSRIDKLDLENSHHIDDRKDMLAQIETTKTHLTKIQSELTE
                     QMEIYREVQQTLAKQEAVFGTQERALYKHYETVQQMKSRKETLEELADDYAGFFQGVR
                     EVLKAKKEIPGILGALVELVEIPAKYQQAMETALGASAQNVVVEDDRVAREAISFLKK
                     TKSGRATFLPLSTIQPRELPAATKNALSNQPAFIALASEVISFDEKVSPVILNALGTT
                     ILAKDLKGANTLARLVNFRYRIVTLEGDVVNAGGSMTGGATKGGKSSILTRKHELGQL
                     AEKITELNEATREMESAVQLAKDSMAKKREELEETRGIGENLRLQEKELLGKLDRETE
                     NLERFNKQLQLYDIEKADGSEELNKLLERKETLLHEQVEIAKQIEATDEEIKAMTSSS
                     KALESKRAADLESLSSLKAQIAAKREQLQSATEAVERVTTTLHENYEQKEAAEQKLAS
                     LKTNLTSVHTSEESARKSIEELRKDKAETSEKLAQTRQTRAELQEKLELLEAELTQKN
                     NQISFYVEQKNNAEISIGRLEVDINNRIDRLQEAYLLTPEQAEEKILPEVNTEQARSK
                     VRLLKRSIDELGIVNIGAIEEFERIQERFDFLNRQQADLLAAKETLFKVMDEMDEEMK
                     IRFSESFEAIKTEFAIVFPELFGGGSAELVLLDPENLLTTGIDIVVQPPGKKLQNLSL
                     RSGGERALTAIALLFAIIRVRPVPFCILDEVEAALDEANVTRFSRYLKQFESGTQFIV
                     ITHRKGTMEEADVLYGVTMQESGVSKLVSVRLEETAELIK"
     gene            complement(7676..8365)
                     /locus_tag="U0290_000732"
     CDS             complement(7676..8365)
                     /locus_tag="U0290_000732"
                     /EC_number="3.1.26.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease III"
                     /protein_id="HEM2300780.1"
                     /translation="MNQWEELQESVGFDFKDVELLKQAFTHSSYVNEHRRENVKDNER
                     LEFLGDAVLELTVSNYLFNKYPDMAEGHMTKMRAAIVCEPSLVEFAEAVHFSKYVRLG
                     KGEEKAGGRTRPALLADVFESFIGALYLDNGIDKVVTFLERVIFPKIDAGAYLQTVDY
                     KTQLQEIVQRDRDVLIEYDILGETGPAHNKAFDAQVIVNGQVLGKGSGRTKKQAEQSA
                     AQFAINQLTHR"
     gene            complement(8560..8793)
                     /locus_tag="U0290_000733"
     CDS             complement(8560..8793)
                     /locus_tag="U0290_000733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465331.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl carrier protein"
                     /protein_id="HEM2300781.1"
                     /translation="MAEVLEKVTKIIVDRLGVEESKVTLEASFKEDLGADSLDVVELV
                     MELEDEFGVEISDGDAENINTVGDAVKYIEANA"
     gene            complement(8900..9643)
                     /gene="fabG"
                     /locus_tag="U0290_000734"
     CDS             complement(8900..9643)
                     /gene="fabG"
                     /locus_tag="U0290_000734"
                     /EC_number="1.1.1.100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465332.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-[acyl-carrier-protein] reductase"
                     /protein_id="HEM2300782.1"
                     /translation="MTLQGKVAVVTGGSRGIGRDIAIKLAKEGANIFFNYNGSPEAAE
                     ETAKLVAEHGVEVEAMKANVAIAEDVDAFFKQAIERFGRVDILVNNAGITRDNLLMRM
                     KEDEWDDVININLKGTFLCTKAVSRTMMKQRAGKIINMASVVGLIGNAGQANYVASKA
                     GVIGLTKTTARELAPRGINVNAVAPGFITTDMTDKLDEKTKEAMLAQIPLGAYGTTED
                     IANAVLFLASDASKYITGQTLSVDGGMVM"
     gene            complement(9647..10588)
                     /gene="fabD"
                     /locus_tag="U0290_000735"
     CDS             complement(9647..10588)
                     /gene="fabD"
                     /locus_tag="U0290_000735"
                     /EC_number="2.3.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACP S-malonyltransferase"
                     /protein_id="HEM2300783.1"
                     /translation="MTKIAFVFPGQGAQKIGMGQDVAAEYPEAKKIYDDADERLGFSI
                     TEIITEGPIELLTKSENAQPALVSTSVAILRALETYGVKADYVAGHSLGEYSALVAGG
                     FLEASDAIYLVRKRGELMEAAVPNGAGAMAAVLGVDRETLKTITEEVTKEGDAVQLAN
                     LNCPGQIVISGTTAGVEKAGGKAKESGAKRVLPLAVSGPFHSSLMEPAALAFRDVLAE
                     VKISDGQIPVVNNVDAKETTDKSEISDKLIKQIYSPVLWEDIVEELIKNGVDTFVEIG
                     SGKVLVGLIKKINRDVTVLSAGDAESVKSVAATLKGE"
     gene            complement(10581..11594)
                     /gene="plsX"
                     /locus_tag="U0290_000736"
     CDS             complement(10581..11594)
                     /gene="plsX"
                     /locus_tag="U0290_000736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acyltransferase PlsX"
                     /protein_id="HEM2300784.1"
                     /translation="MKIAVDAMGGDHAPKEIVLGVMKAVAQYKDVEILLFGDETKINE
                     YLTDKTRVKIIHTDEKIESDDEPVRAVKRKKKASMVLAAQAVKDGEADACISAGNTGA
                     LMSTGLFVIGRIKGIDRPALAPTLPTVTGKGFVMLDLGANAEAKPEHLLQFGLMGSVY
                     AEKVRKIDRPRVALLNIGTEETKGNDLTKKSFELMKNQDAYEFIGNIEARDLLMDVAD
                     VVVTDGFTGNMVLKSIEGTGAAFLSMLKMSLLNGFKNKVAASFLKKDLMALKAKMDYS
                     EYGGACLFGVQAPVVKAHGSSNANGIFTTIRQVREMVEKQVVETIKAEVDKVKVGGTE
                     SND"
     gene            complement(11615..12184)
                     /gene="fapR"
                     /locus_tag="U0290_000737"
     CDS             complement(11615..12184)
                     /gene="fapR"
                     /locus_tag="U0290_000737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription factor FapR"
                     /protein_id="HEM2300785.1"
                     /translation="MKKYSKKDRQMKLQVAIEENPFITDEQLAEKFGVSVQTIRLDRV
                     ALSIPELRERIKHVASVNYADAVKSLPIDEVIGEIIDIQLSKSAISIFDVRSEHVFKR
                     NKIARGHHLFAQANSLATAVIPNEIALTTQATVRFVRSVNEGERIIAKAKVRPATDNR
                     AITIVDVKSYVGDEIVLKGKFEMYHATQK"
     gene            complement(12366..14414)
                     /gene="recG"
                     /locus_tag="U0290_000738"
     CDS             complement(12366..14414)
                     /gene="recG"
                     /locus_tag="U0290_000738"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase RecG"
                     /protein_id="HEM2300786.1"
                     /translation="MSELKRIPTTEIKGIGEETAKTLKELGLSTVHDLLWNFPYRYED
                     YRLRDLSEVAHEERITIQGEVLTEATVAFYGRKKSKLSFRVSTEGQVIKIDFFNQPYL
                     KSKISVGETVTISGKWDKSRAQVTASKIKIGAVESEEELEGVYRLKGTLRNKTMQKYT
                     RLAFDSYSQDIEEVIPSNLLEKYQLMDRLEAVRILHFPKNNEELKQARRRMVYEEFLL
                     FQLKMQFFRKIEREKSGGISINYDVEDLRHYIDSLPFPLTKAQKRVVNEICGDMLSHF
                     HMNRLLQGDVGSGKTVVASIAMYAAAKSGFQSALMVPTEILAEQHANSLVELLQPFDI
                     TVGLLTSSVKGKQRRELLAMLENGSIDVLIGTHALIQDEVIYHRLGLVITDEQHRFGV
                     AQRRVLREKGEYPDVLFMTATPIPRTLAITAFGEMDVSIIDELPAGRKEIETYWVKHQ
                     MLDRVIGFMEKEIDKGHQVYIICPLIGESEKLDVQNAIDVFNILQNKWGTKYIPGLMH
                     GKLLPADKEQIMRDFNNKKIDCLVSTTVVEVGVNVPNATMMVIYDADRFGLAQLHQLR
                     GRVGRGADQSYCILIADPKTEVGKERMMIMSETNDGFVVSERDLELRGPGDFFGRKQS
                     GVPEFKVADMVHDYRVLEIARQDAVHMIFEEDMLENKNYEKLVALLEEEGVFTEQKLD
                     "
     gene            complement(14407..15297)
                     /gene="sdaAA"
                     /locus_tag="U0290_000739"
     CDS             complement(14407..15297)
                     /gene="sdaAA"
                     /locus_tag="U0290_000739"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent,
                     subunit alpha"
                     /protein_id="HEM2300787.1"
                     /translation="MFRTVAELVDIAERENLTIAEIMIKREMNISGLPREEITAAMER
                     NLDIMEEAIREGETGVTSTTGLTGGDAVLMQDYIKKGNFLSGEVLLDSVAKAIATNEV
                     NASMGVICATPTAGSAGVVPGVLFSLKDRLEMSREDMVNFLFTAGAFGYVVANNAFIS
                     GAAGGCQAEIGSASAMASAAIVAAAGGTPEQSAHAMAMTMKNMLGLVCDPVAGLVEVP
                     CVKRNALGSSQAIISADMALAGIKSRIPCDEVIEAMHRVGLQMPSSLRETAEGGLAAT
                     PTGRAIQRKIFGLSPEDKRE"
     gene            complement(15433..16095)
                     /gene="sdaAB"
                     /locus_tag="U0290_000740"
     CDS             complement(15433..16095)
                     /gene="sdaAB"
                     /locus_tag="U0290_000740"
                     /EC_number="4.3.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-serine ammonia-lyase, iron-sulfur-dependent
                     subunit beta"
                     /protein_id="HEM2300788.1"
                     /translation="MKFNSVFDIIGPVMIGPSSSHTAGASRIGAIARAVFNEQPSQVD
                     IHLYGSFAKTYKGHGTDVALIGGLLGFEPDDPRMKESPKLAEEWGMRIQFIEEVEEPP
                     HPNTVKLVLKHGMQQMTLIGASIGGGKVEIIRLNEFELEFTGTAPAILILHQDKFGAI
                     AAVSSVIADHKINIGQMKVSRKVKGDEALMVIEVDQQVEQALISKIAELPGIYQVASV
                     MI"
     gene            complement(16135..17793)
                     /locus_tag="U0290_000741"
     CDS             complement(16135..17793)
                     /locus_tag="U0290_000741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DAK2 domain-containing protein"
                     /protein_id="HEM2300789.1"
                     /translation="MSIYQLDSEKFAAMIALGAENLAKNADFVDSLNVFPVPDGDTGT
                     NMNLSMTSGAEEVAKNDKETISAVGANLAKGLLMGARGNSGVILSQLFRGFSKAIENK
                     ETLNAEEFAGAFVKGVETAYKAVMKPVEGTILTVAREAAKAGVAAASEHQDIELVMEA
                     ILKQGKVALEKTPDLLPVLKEVGVVDSGGQGLIIIYEGFYGALTGKMAEAPDYMASMG
                     ELINAEHHRHVQDFMSTEDIHFGYCTEIIVKINENKPGQKPFDEEQFRQDLSKLGDSL
                     LVAADDEVVKVHVHVEHPGEVLNYGQQYGSLLKMKVENMREQHTEIVGDDKVPAKEKA
                     AYGIVTVSAGEGLKKLFESMGVSVVLSGGQTMNPSTEDIVKAIESANAEQVFVLPNNK
                     NIQMAAEQAAQILGDDKVQIIPTKTIPQGLTAVLSFQADQDFLANAEAMKAAIEDVAS
                     GQVTTAVRDTTVEGVEIKKDSFIGMVEGKIKVSCATLEEAAYETLEKLLDDDSEIITI
                     IVGEDADTSKAETLADKVTEAFPDVEVEIHEGDQPVYPYIFAVE"
     gene            complement(17808..18173)
                     /locus_tag="U0290_000742"
     CDS             complement(17808..18173)
                     /locus_tag="U0290_000742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Asp23/Gls24 family envelope stress response
                     protein"
                     /protein_id="HEM2300790.1"
                     /translation="MAIEIDTKLGKIDITSDVIATIAGGAAEENFGIVGMASRHQIRD
                     GLTDILRRENYTKGVIVRQEEEGIHIDMYIIVSFGTKISEVAHNVQERVKYTLEKTLG
                     ITVESVNIYVQGVRVIKES"
     gene            18472..18660
                     /locus_tag="U0290_000743"
     CDS             18472..18660
                     /locus_tag="U0290_000743"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465341.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L28"
                     /protein_id="HEM2300791.1"
                     /translation="MAKECVITGRKSRSGNKRSHAMNSSKRTWKANLQKVRILVNGKP
                     KKVWVSARALKSGKVERV"
     gene            complement(18757..19401)
                     /locus_tag="U0290_000744"
     CDS             complement(18757..19401)
                     /locus_tag="U0290_000744"
                     /EC_number="2.7.6.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine diphosphokinase"
                     /protein_id="HEM2300792.1"
                     /translation="MKIINIMVGGPASEIPDLAQYTSAEISWIGVDRGAKRLLDYGIV
                     PTVAMGDFDSLSKEELAHLKTKVADVHEFPAEKDETDTEIGLSWAMEQNPDKIRIFGA
                     TGGRLDHLLANLMMLTKPKFLSAVPVVEMIDRHNYIKMYMPGSYTIEKLPDKKYVAFT
                     TMKDVTGLTLKGFAYPLENATYPVGSALSSNEFVGQMGEFSFKSGMILLTQSND"
     gene            complement(19465..20121)
                     /locus_tag="U0290_000745"
     CDS             complement(19465..20121)
                     /locus_tag="U0290_000745"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM2300793.1"
                     /translation="MGKIAPSILSADFANLARDIKEVENCGADYIHIDVMDGHFVPNI
                     TFGPAVVQAIRPETKLPLDVHLMIENPDTYIPEFAKAGADYITVHVEACTHLHRTLQL
                     IRSYGVKAGAVLNPATPIDVLQHVLNELDMVLFMTVNPGFGGQKFIPEVLEKISAFKK
                     IVDEKGLDIEIEVDGGVDHETAKLCRDAGANVFVAGSYIYGNKNRQTPIDKLRAIVGE
                     "
     gene            complement(20124..20999)
                     /gene="rsgA"
                     /locus_tag="U0290_000746"
     CDS             complement(20124..20999)
                     /gene="rsgA"
                     /locus_tag="U0290_000746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEM2300794.1"
                     /translation="MLEGQIIKALSGFYYVFSEGKVYQCRARGNFRKRNISPLVGDDV
                     EFQIENKTDGYILDVMSRENALVRPPVANIDIAILVFSAVEPDFSTNLADRFLVAIEK
                     EDIKPVICISKMDLASESEKEQIAVYKDIYEAIGYDVFVTNDEPDKEAIKDYISGKTA
                     VIAGQSGVGKSTLLNSLNSDLTLKTAEISNALGRGKHTTRHVELMPIGDGFVADTPGF
                     SSIEWDDLQPETLQFCFPEMEDRRSGCKFRGCMHDNEPNCAVKTAVEANEIAEFRYKH
                     YIQILQELKNRKPRY"
     gene            complement(21018..22985)
                     /gene="pknB"
                     /locus_tag="U0290_000747"
     CDS             complement(21018..22985)
                     /gene="pknB"
                     /locus_tag="U0290_000747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stk1 family PASTA domain-containing Ser/Thr
                     kinase"
                     /protein_id="HEM2300795.1"
                     /translation="MMIGKRLSDRYKILHAIGGGGMANVYLAHDIILDRDVAVKILRI
                     DLADESNLIRRFQREAQSATSLVHPNIVSVYDVGEENDLHYIVMEHVDGMDLKQYIHE
                     NHPISYDKAVDIMLQIVSAVAIAHQHHIIHRDLKPQNILIDHDGVVKITDFGIAMALS
                     ETSITQTNSLLGSVHYLSPEQARGGMATQKSDIYSLGIVLYELLTGKVPFDGESAVSI
                     AIKHLQADIPSARAQNPEIPQSLENIIIKATAKDPFLRYQNAEEMEKDLQTCLNQDRL
                     NEPKYIFPTDDGDTKAIPIIATKDTMQNLDKTIVPEGKVAAAEVAPEENKGKKKKKMS
                     KKKKIALIVSSVIIIFIIGILLLWLLGKSPDEVAVPDVSGKTEDQAVALLQKEGFVIG
                     KTAEKNSDEVAEGKVINTDPEAGEMKEKGTKINLFVSIGSKKITMDDYTGRSYTDTKA
                     LLEEQGFNNISSEEAYSSEVEKGLIISQTPTQGTDVVAKSTDVKFVVSKGAEPISLKD
                     LRGYTKTAVEDYASPLGLKVSSKEENSNTVEKGQVISQSPSAGTAMNPGDTIEIVISA
                     GPKEKQVKEVTKTFNIPYTPSDEENPQPQKIQIYIQDKDHSMTSAYREMSITQNTSVE
                     ITFQIEEGSSAGYKIISDDKVIDEGTVPYPN"
     gene            complement(22982..23740)
                     /locus_tag="U0290_000748"
     CDS             complement(22982..23740)
                     /locus_tag="U0290_000748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Stp1/IreP family PP2C-type Ser/Thr phosphatase"
                     /protein_id="HEM2300796.1"
                     /translation="MHAEFRTDRGRIRHHNEDNGGVFENKDNQPIVIVADGMGGHRAG
                     DVASEMAVRLLSDAWKETTALLTAEEIETWLQKTIQEVNKEIVLYSESEMDLNGMGTT
                     LVAAIMAQSQVVIANVGDSRGYLLQNHVLRQLTEDHSLVHELLRTGEISKEDAMNHPR
                     KNILLRALGVEGKVEVDTFVVPFQTSDTLLLCSDGLTNMVPETEMEEILKSKRTLSEK
                     ADVFITKANSYGGEDNITVLLVERDLTQKGRDAS"
     gene            complement(23763..25097)
                     /gene="rsmB"
                     /locus_tag="U0290_000749"
     CDS             complement(23763..25097)
                     /gene="rsmB"
                     /locus_tag="U0290_000749"
                     /EC_number="2.1.1.176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(967)-C(5))-methyltransferase
                     RsmB"
                     /protein_id="HEM2300797.1"
                     /translation="MKKQKTVRAIALELIIKIENNQSYSHLLINDALKKQKLNPLDKG
                     LLTELVYGTTQRKITLDYYLAPFLNKEPDNWVKNLLRMSVYQLTFLDKVPEHAILNEA
                     GDIAKDLGHQGVTKFVNGVLRNVIRKGVPSIDAIKDPVQKIAVETSLPEWLAKRWADQ
                     YGIEKLREIGLAFLVAPHQSIRVNQTEIPTEQLIKELNDQGITVTRNEFIEEALLVEK
                     GSVAETKAYKDGKCSIQDESSMLAAYALQLEDNLTVLDACAAPGGKTTHIAEKMHGTG
                     MVHALDIHEKKTKLIDQAAKRLQLLNIRTAHLDARTASTMFEPETFDRILVDAPCSGF
                     GVLRRKPDIKYAKTEKDIHKLAEIQLAILDDVSQLVKENGILVYSTCTIDKEENETVL
                     RAFLEKHPEFTLEPVVLPEKLAQIKKDDFIQLLPTDIGSDGFFVSSLRKVKS"
     gene            complement(25098..26048)
                     /locus_tag="U0290_000750"
     CDS             complement(25098..26048)
                     /locus_tag="U0290_000750"
                     /EC_number="2.1.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionyl-tRNA formyltransferase"
                     /protein_id="HEM2300798.1"
                     /translation="MTKIIFMGTPEFSVPVLAQLASTYDVVAVVTQPDRPVGRKRVLT
                     PPPVKKAALELAIPVYQPEKLRTSSELEELIALEADLLVTAAYGQILPNSLLESPKHG
                     AINVHASLLPEYRGGAPVHYALLDGKTETGVTIMYMVEKLDAGDMISQRKIPITDEDN
                     TGTMFDKLSKLGAELLMDTLPDFLAGKITAIPQDPEKVTFARNISREQEKIDWTKPGR
                     TIFNQIRGLSPWPVAYTTLEEKPFKIWEATYEETYEETKEDGEPGAILADKTTLKIVA
                     GDGTLIVPTVIQPAGKPKMDVHSFMTGAGRNLSKSTRFGE"
     gene            complement(26062..28455)
                     /gene="priA"
                     /locus_tag="U0290_000751"
     CDS             complement(26062..28455)
                     /gene="priA"
                     /locus_tag="U0290_000751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein N'"
                     /protein_id="HEM2300799.1"
                     /translation="MINIAKVIVDVPAMQVDRPFDYYIPEDLEELIRPGMRVSVPFGN
                     RKIQGFVIALGETEENPKLKGIDGVMDLAPVLNEELMELGDWLAEDTLSFRVSAYQAM
                     LPAALRAKYEKYFLRLDEENEELEQLFEGYETLDWKVAEARGLLKQIGKWVREGSVEV
                     VYQVKNKITSKKIRVVNCLKSPHQLAEIIEDMPKNAKAQSRVLAFFQAFEGNEITAAE
                     LKKQAETTDATIKKLVDLGILSIQEKIVSRDPYENHQFEKSESLQLLPDQQTACEKIT
                     AATDQETFLIHGVTGSGKTEIYLQTIEAKLKEGKEAIVLVPEISLTPQMVERFKSRFG
                     SEVAVLHSALSSGEKYDEWRKIERKEARVVVGARSAVFAPFENLGIIIIDEEHEASYK
                     QEDNPRYHARDVAIWRATKYQCPVVLGSATPSLESFARAKKGVYTLIELPSRVNDRAM
                     PEVSVVDMREELRKENRTEFSTELLEKIKERIAKKEQTVLMLNRRGYSSFVMCRDCGY
                     VVECPNCDISLTYHQSSNQMKCHYCGHEERVPQKCPSCEGEHIRYFGTGTQKVEESLT
                     KLIPEARVIRMDVDTTRTKGAHEKLLKSFRNHEADILLGTQMIAKGLDFPDITLVGVL
                     NADTMLHLPDFRASERTFQLLTQVSGRAGRHERTGEVIVQSYNPEHYSIEFAKKHDFI
                     GFYNHEMQLRKMGSYPPFYYLTMINVSDENEMKAIRTIQEMAQFLRGKLGPDAVILGP
                     VPSTITRIKNKYRYQCIIKYKIEPNLKKELKTLITHYQKDQQKGLTITIDVQPYVLM"
     gene            complement(28460..29659)
                     /gene="coaBC"
                     /locus_tag="U0290_000752"
     CDS             complement(28460..29659)
                     /gene="coaBC"
                     /locus_tag="U0290_000752"
                     /EC_number="4.1.1.36"
                     /EC_number="6.3.2.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional phosphopantothenoylcysteine
                     decarboxylase/phosphopantothenate--cysteine ligase CoaBC"
                     /protein_id="HEM2300800.1"
                     /translation="MQGKNILLAVSGGIAVYKAVALTSKLTQAGANVKVMMTEHAQEF
                     VPPLSFQVLSKNDVYTDTFDEKKSSVVAHIDLADWADLVIVAPATANVIGKMANGIAD
                     DMVTTTILATEAPVWVAPAMNVHMIQHPAVIRNINRLYADGVRFIEPEEGYLACGYVG
                     RGRLEEPEKIVLRIAEFFQEDKDLLRDKNVLVTAGATREKLDPVRYFTNHSTGKMGFS
                     IAESAARHGAKVTLVTTSKALPVPPGVEAIYVESAEEMYQAVDEHKVSQDIFVMTAAV
                     ADYTPAKVSDQKIKKQPGDFAIEMKRTKDILLEIGQHKTADQVVIGFAAETENLEANA
                     RKKLTSKNADMIVANNISVAGAGFSGDTNIVTFYRKDGSSKALPILDKKEVAEHIIKE
                     TANFLRK"
BASE COUNT         7575 a         6411 c         5354 g        10339 t
ORIGIN      
        1 taaaaagtac tagaaccaaa aaatacttca attcgattct tttagtctaa aagttataca
       61 aatatacgta tttatagcct gtatttaaac tttagcactg ttcctaatag ggtattaaga
      121 cctatagcag ttaacattac acgaattgtc tttcaattgt atacaaatct ttttaaaatg
      181 gttcttcact tcagattcta tttgtacgca aaaaaaaagc cctttttcaa gggcttactt
      241 ttttaataaa gataggcttt ttttagttgt tcttttttag catcggttag tccgagtttt
      301 tcttttaaaa agttgtccat cgaaccatat tttgcatcaa tttcatcaaa ggctgcattg
      361 atataagatt cacgaacttc cattacggct gtcattccat caatcacttt tttattatct
      421 gtttttgctg caacggcttc aattgctttt ttattttcga gggcacgata tttattggaa
      481 agcatataat cgttaatgac tgtgttttta tccactccta atgctgacag aacgagggcg
      541 gttccaaatc cagcacgatc ttttccagct gtacagtgcc aaagaacaga tccatcttgg
      601 tttgctaata gtatatcaaa aaaatcttta taggcttgta tcgaagtttc atctgtaata
      661 aagctcttat tggcattaat gagaaatgtt tctggattat ccattttggc taggctggca
      721 gttaaatctt gtgtgcttgt agatgcacca ttatctttca tcacagaatc gtgcgtatag
      781 tcaacatctg tgagttttgg gtctggtttg gctgcgactt ctgaacttgt tcggaaatca
      841 actatatgag acaaatcgta tgtatttacg agtttctttt tatccgaatc acttaagtta
      901 gcgagttcgg cacttctaat gagtttatgt ggcttgatag ttagtccatc cgttgttttg
      961 tatccgccta agtcccggac atttacagca ccttctaatt taatttggct tcctggtttg
     1021 actgtttgct cggttttaac gtttgcctcc gctttttctt ctgactgcgc tccgcatcct
     1081 cctaatagta aagtcgcgct tagcacccct gcccctgtta cttttaccca atgtttcatt
     1141 ctttctcctc cttttgtaag cttcttgtac attatagcaa cgcaatttgt tggttgaatg
     1201 aagggtttgt aaagaaatga ttttagggat gttaaggtat gaaaaaaagc caaaacccgg
     1261 aatgggtttt gacttttaga attaaaatgg cattttgaaa ttgccgaatg gatttttgcc
     1321 ttttttgcct ttgccgccac cagtcatttg cttcatcatt tttttcattt caccaaattg
     1381 ttttaggaga cggttaattt cttgaaccgg acgtccgcta ccacgtgcaa tccgttttct
     1441 tctacttgca ttgatgatat ctggattgtc tttttcattt ttggtcattg acttgataat
     1501 tgcttcaata tgacctagtt gtttatcatc gacgttcatg ttgtcgaggc ctttcatttt
     1561 gtttgcctct ggcatcattt taagtagttc atctagtggt cccatttgtt ttacttgttg
     1621 taactgttct aagaagtcat ctagcgtcat gctgttgtct ttcatttttt gttccatagc
     1681 tttcattttt tctgtatcta catcggtttg cgctttttca atcagggaaa gcacatcgcc
     1741 catgccgaga attctggaag ccatacgatc tggatggaaa gtttctagag cttccatttt
     1801 ttcaccagtc gcgataaatt taattggttt gccagtgacg gaacgaatcg aaagcgctgc
     1861 accaccacgt gtatcaccgt ctaatttggt tagcacgaca cctgtaattt ctaattgttc
     1921 gttgaagctt tgcgccacgt tgacagcatc ttgcccagtc atggaatcga caacaagcag
     1981 gatttcggtt ggcgttgcaa tttctttcac ttgttttaac tcatccatta gcgtttcgtc
     2041 aatatgaaga cgacccgctg tatcgataat aacataatct aaatgttctt cttttgcttt
     2101 agcaatagct tgtttggcga tttctaccgg gcttacttgg tctcctagag aaaataccgg
     2161 catatctaat tgcttgccaa gtgtttctaa ttgtttgatt gcggcaggtc ggtaaatatc
     2221 tgctgcgaca agtaatggtt tgcggttata ttttttgcgt aataaattag caagtttgcc
     2281 ggaagtcgtt gttttaccag ccccttgtaa acctaccatc ataatcacgg ttggtgggcg
     2341 gtccgctgtt ccgattttgc tttcttctcc gcccattaag cttgttagtt cttcttgaac
     2401 gattttgata acttgttggc cgggtgttag gcttttcata acgtccgcgc cgacagcacg
     2461 ttcgcttact gttttaataa attgtttaac gactttaaag ttaacatcgg cttcaagtag
     2521 agcaagacga acttcacgca tcatttcttt tacgtcagct tcgtttactt tccctttgcc
     2581 gcgaattttg ttcattgttt cttggagtct tccagctagt ccttcaaatg ccatgattct
     2641 ggcctcctaa tcgatatttt taagctgttc gagcgtatct ttcacttgct cgtccagaaa
     2701 attcttcttg gttaattgtg cttctaattg actaaaaagt ttttctcgtt gttggtattt
     2761 ttttagcatc cctagttttt cttcgtattt ttctaggctt tcttcggttc ttttaatatt
     2821 atcataaatg gcttgtctac tcacttcaaa ttcttcagca atttcgccta gcgagtaatc
     2881 atctagataa taaaaagaaa cataggcttt ttgttttgtt gttagtaatt cctggtaaaa
     2941 atcaaataat aaattcatac ggtttgtctt ctcaaacaag gcatttcacc tctctccttt
     3001 taaaggatac ggggaaatcg cgggaatgtc aaggaaggtt aaacaaaaga gaaaaaagcc
     3061 agaatgacga gaatcattcg gctttctctg attatttttc gttatcaacc atatcagcaa
     3121 ataagccata cacatattca tttgcatcaa aggcttgtag gtcgtccatt tgttccccaa
     3181 gaccgacgaa tttcactgga atatctagtt cattgcgaat ggcgataaca ataccaccct
     3241 tggcagttcc gtccagtttt gtgaggataa tgcctgttac gtcggttgtt tctttaaatt
     3301 gttttgcttg aacgaaagca ttttggccag ttgtagcatc aagtactagt aaaacttcgt
     3361 gcggcgcatt aggaatttca cgcgtaatga cacgttttac tttttctaat tcgttcatta
     3421 gattgacttt gttttgtaaa cggccagctg tatcgcaaag taaaacgtcc gctttgcgtg
     3481 cttttgctgc ttgaacggca tcaaacatca ccgctgcagg gtcgcttccc tcggcttgtt
     3541 taataacatc gacgccggta cgctcgcccc agacttctaa ttgatcaatg gcaccagcac
     3601 ggaatgtatc gccagcagct aacatcactt ttttaccttc ttgtttaaag cgatgagcca
     3661 tttttccgat ggaggttgtt ttaccaaccc cattcacacc aacaaacaag ataacggtta
     3721 gcccgtcttc ttcgatatga agtgcttcgt cttctttttc gtctccttgg taaatctcga
     3781 ctaatttttc gactatcact tcttgtacgt cttttggatc actgatgttt ctaagttgaa
     3841 cttcacggcg tagcgtatcg actagttcca tgacagtttc aaaaccaacg tctgctccga
     3901 taaggatttc ttctagttct tcaaagaaat cttcgtcgac tttacgatag cgagcaacca
     3961 tttcgttaat ttttccggaa aagttgccgc gtgttttgga taagccatct ttaaattttc
     4021 cagaaacaga atcagtttgc tgagttattt tatcttttaa ttttttaaaa aaggtcattt
     4081 tgtttactcc ttttatttaa tgagttcagc tgtttcttct aaacgaactg atactagttt
     4141 ggagacgccg gactcttgca tggtgacgcc gtataatacg tcggcttctt ccattgttcc
     4201 tttacggtgt gtgatgacga tgaactgcgt gccggactcg aattgcttta agtaacggct
     4261 gaatcgtgta acattggctt catctaaagc cgcctctact tcatccaaaa tacagaatgg
     4321 tactgggcga acgcgaatga tagcaaataa taatgcaatc gccgttagcg cacgttctcc
     4381 gccagaacga agcgataggt tttgtaattt tttcccaggt ggttgaacga cgatatcaat
     4441 cccggttgtt aggagatttt ctggatcaag gagcaccagt tccgcgctac ctccaccaaa
     4501 tagctcaggg aaaacaatcg caaattcggt tttaattgct tcaaaacttt cactaaaacg
     4561 aattttcatt tcttcgtcca tttcgtccat gactttaaaa agggtttctt ttgcggcaag
     4621 taagtccgct tgttgcctgt ttaggaagtc aaaacgttct tggatacgct caaattcttc
     4681 gatggcacca atattgacga tacctagttc atcaatagaa cgttttaata agcgaacttt
     4741 cgaacgagct tgttcggtat ttacttctgg caagattttt tcttcggctt gctctggtgt
     4801 tagtaagtaa gcttcttgca aacgatcaat tcggttatta atatctactt ctaaacgacc
     4861 gatgcttatt tctgcattat ttttttgctc cacgtaaaaa ctgatttgat tatttttttg
     4921 tgttaattcg gcttctaata gttctaattt ttcttgtagt tcagcacgag tttgtcttgt
     4981 ttgcgcaagt ttttcgcttg tttcagcctt atctttgcgc agttcttcaa tggattttct
     5041 agctgattct tcgcttgtat gaacgctagt taagttggtt tttaaggaag ctagtttttg
     5101 ttcagccgct tctttttgtt cgtaattttc atgtagcgtt gtcgttactc gctcgacggc
     5161 ttctgtagca gattgaagtt gctctcgttt agcggcgatt tgcgctttta aggatgacag
     5221 actttctaaa tctgctgcac gtttgctttc tagtgctttg cttgaacttg tcatcgcttt
     5281 gatttcttca tcggttgctt cgatttgttt tgcgatttcg acttgttcat gtagtaaagt
     5341 ttcttttcgc tccagtagtt tgtttaattc ttcgctaccg tctgcttttt caatatcgta
     5401 tagttgtagt tgtttattga agcgctctag attctcagtt tctcggtcta gttttccaag
     5461 taattctttt tcttgtaaac gtaaattttc accgattcct cgtgtttctt cgagttcttc
     5521 acgttttttc gccatgctat ctttagctag ttgaaccgca gattccattt cacgagtggc
     5581 ttcgtttaac tcggtaattt tctctgctaa ttggcctaac tcatgttttc tcgttaaaat
     5641 agacgatttt ccgcctttgg ttgctccacc agtcatcgaa ccaccggcat tcacgacgtc
     5701 accttctagt gtcacaatgc gatacctaaa gttgactaag cgagcgagcg tattcgcccc
     5761 ttttaaatct ttcgccaaaa tcgttgtccc tagagcattc aaaataaccg gagaaacttt
     5821 ttcatcaaaa gaaatgactt cacttgcaag tgcgataaaa gcaggttggt tgcttaaagc
     5881 gtttttcgtt gcagctggaa gttcgcgagg ttgaatagtc gaaagtggta agaaagttgc
     5941 gcggccactt ttcgttttct tcaagaaact gatggcttca cgagcaacgc ggtcatcttc
     6001 tacgacaacg ttctgcgcac ttgccccaag cgctgtttcc atggcttgtt ggtacttcgc
     6061 gggtatttct acgagttcta ctaacgcacc taaaatccct ggaatttctt ttttcgcttt
     6121 taagacttcc cggacacctt ggaaaaagcc agcataatca tccgccaact cctctaatgt
     6181 ttccttccgc gatttcattt gttgcactgt ttcataatgt ttataaagcg cacgttcttg
     6241 cgttccaaaa acagcttctt gtttcgctaa agtttgctgt acttcacggt aaatttccat
     6301 ttgttccgta agctcacttt ggatttttgt taaatgtgtt ttggttgttt ctatttgagc
     6361 gagcatatct tttctatcat cgatatgatg gctattttct aaatctaact tgtcaattcg
     6421 actcgtgatc tgaccgattt ggcgctcaat ataacctaaa tcattattaa ttgtcgtttg
     6481 cgtgtggcgc agatcaatat aatcactttt gcggttttcg attgcttctt cggataaatc
     6541 atcgtatttg gcaagtgtta cttctagctc ttttttcgct ttgaccgcaa tttcaagtgc
     6601 tgtttctttt tcgagttttg agctacttag aacttctttt tgctcttcca aggcagtaat
     6661 tttttccgta attgccgcca gtgtttctgc gtaaacttgt tcattttcgc tactgtgctt
     6721 tttacgttct aattggagat ttcgctctcc ttctagttgt tccagttttt ccgtttcaac
     6781 taaaagacgt tcttgtaaat tatcaagcgc aatatctgtt tcattcagtg catgtttttc
     6841 gcgtgaaata accgcttctt cggcatgtaa ttcttcgcgt agcttaatta aaaccgtttg
     6901 attttcacca aattctttac gaacttcggc tagtttttct gttaaggaac tgatttcgct
     6961 cgcgagtaaa gtcacttcgt atttttctag ttcttcttgt tggaataaat aatctttcgc
     7021 aatagaagct tgcatttcaa gcggctccaa ttgtccttct aattcgtata aaatatcttg
     7081 tactcggttt aaattttctt cggtttcaaa taatttattt tctgcttgtt ttttacggtg
     7141 tttatatttt aatacgccgg ctgcttcttc aaaaatcgag cgacgttctt ctggtttgct
     7201 gttcagaatt tcatcgattt tcccttgcga aataatcgaa aaagactctc ttccaagtcc
     7261 agagtccata aataaatcga caatatcttt cagtcgacaa ttttctttat taattaaaaa
     7321 ctcgctatca ccattacggt aaatacgtct agtaacagct acttcgctat aatcaagtgg
     7381 taaaaaatgg tcttcatttt cgaggataag tgacacttcc gcaaaattaa ttggtttccg
     7441 tgtatcactt ccagcaaaaa taacatcacc cattcggcca ccacggagcg atttagcgga
     7501 ctgctcacca agtacccagc ggattgcttc tgtaatatta cttttcccgc tgccatttgg
     7561 ccctacaact gcagtcatgc cgggcacgaa atctatcgca actttgtcag caaaggattt
     7621 aaagccattc atttctaatc gttttaataa catgtccgga cacctccatt tttgtttatc
     7681 tgtgtgttag ttggtttata gcaaattgtg ccgcactttg ttctgcttgt ttttttgttc
     7741 tgccgctgcc ttttccgagt acttgtccgt taacaattac ttgggcatcg aatgctttat
     7801 tgtgcgctgg tcctgtttcg ccaaggatat catattcgat caagacatca cggtcccgtt
     7861 gaacaatttc ttgcagttgc gttttataat ccactgtttg tagatatgcc cctgcatcaa
     7921 tttttggaaa aataacacgt tctaaaaatg tcacaacttt gtcaatccca ttatctaaat
     7981 aaagcgcgcc gataaaagat tcaaatacat ccgccagaag tgccggacga gttcttccac
     8041 cggctttttc ttccccttta ccaagtcgta cgtatttaga aaaatgtact gcttctgcaa
     8101 actcgactaa agaaggctca caaacaattg ctgcgcgcat ttttgtcatg tgtccttctg
     8161 ccatatctgg atatttgtta aatagataat tcgatacagt gagttcaagg actgcatcac
     8221 caagaaattc taagcgttca ttatctttca cattttcccg gcggtgttcg ttcacatatg
     8281 aggaatgtgt gaatgcttgt tttaataatt caacatcttt aaaatcgaat ccaacgcttt
     8341 cttgtaactc ttcccattga ttcatttcac ttgctcctct ctttaataag caagttcatt
     8401 ttctaaacag ccactagcaa aaagctgctt agaaaatgaa ccaacaaaat ctcgtgacct
     8461 tgaaaaagag gccacctgcg ctacttgtct cgcgtgcgga agttaccaca gcaaagataa
     8521 gtaacacggg caccctcatt tatccggtca cataaagttt tatgcgttcg cctctatgta
     8581 cttcactgca tcaccaactg tgttaatgtt ttcagcgtcg ccatcagaga tttcaactcc
     8641 gaactcgtct tcaagttcca ttactaattc aacaacatct agagaatctg cacctagatc
     8701 ttctttgaag gaagcttcta aagttacttt ggattcctcg acacctaaac ggtcgacgat
     8761 gatttttgta actttttcta atacttctgc catttttcac ttcacctccc tccaagtatt
     8821 atataggatt atttctccta cgtaaacaaa aatatttaaa gtaatgcgag ccaattaaat
     8881 tcgcattcat taaccaattt tacatcacca ttccgccatc aacagatagt gtttgaccag
     8941 taatatactt cgaagcatcg ctcgctagga aaagaactgc atttgcaata tcttccgttg
     9001 ttccataagc accaagcgga atttgcgcta acattgcttc ttttgttttt tcatctaatt
     9061 tgtcggtcat atctgttgta atgaaaccag gagcaacagc atttacgtta ataccacggg
     9121 gcgcaagttc tcgagcagtt gtttttgtta aaccgataac gcccgcttta cttgctacgt
     9181 aatttgcttg acctgcatta ccaatcaaac caacaacaga tgccatgttg ataattttac
     9241 ctgcgcgttg tttcatcatt gtacggctta ctgcttttgt acaaaggaaa gttcccttta
     9301 ggttgatatt aattacgtca tcccattcgt cttctttcat acgcattaat aagttatcac
     9361 gtgtaattcc cgcattattc acaagaatgt ccacacgacc aaagcgttcg attgcttgtt
     9421 tgaaaaaggc atctacatct tcagcaatgg ctacgtttgc tttcattgct tctacttcaa
     9481 caccatgttc agcaacgagt tttgctgttt cttctgcagc ttctgggcta ccattgtaat
     9541 tgaagaaaat atttgcgcct tctttggcta atttaatggc aatgtcacgt ccaattccgc
     9601 gtgatccacc tgttactact gctacttttc cttgtaaagt cattaattat tctcctttca
     9661 atgtcgctgc aacgcttttc actgattcag cgtcacctgc tgacagtaca gttacatcac
     9721 gattaatttt tttaattaag cctactaaga cttttccaga accaatttcg acaaacgtat
     9781 ctacgccgtt tttaattaat tcttcgacga tatcttccca taatactgga gaatagattt
     9841 gcttgattag tttatcgcta atttcggatt tatccgtagt ttctttagcg tccacgttat
     9901 taaccactgg aatctgacca tcagaaattt taacctctgc taaaacatca cggaaagcaa
     9961 gtgcggctgg ttccattaag ctagagtgga aaggtccgct aacagcaagt ggtaatacgc
    10021 gttttgcgcc actttctttt gcttttccgc ctgctttttc aacgccagct gttgttccag
    10081 aaataacgat ttgtcctggg cagttaaggt tagcaagttg tactgcatcg ccttctttag
    10141 ttacttcttc ggtgattgtt tttaatgttt cccggtctac accaagaact gcagccattg
    10201 cgccagcacc atttggtaca gctgcttcca ttaattcacc gcgcttacgt acaaggtaaa
    10261 tcgcatcact tgcttctaaa aatccgccag caacaagcgc actatattca ccaaggctat
    10321 gtcccgctac gtaatcagct ttcacaccat atgtttctaa agcgcgtaaa atagcaacac
    10381 ttgtggaaac taaagctggt tgtgcgtttt cggatttcgt taataattca attggacctt
    10441 ctgtaataat ttctgtgatt gaaaacccga gtctttcgtc agcatcatca tagatttttt
    10501 ttgcttcagg atattctgct gctacatctt gtcccatgcc aattttttgt gctccttgac
    10561 cgggaaatac aaatgcaatt ttagtcatta gattctgttc ctcctacttt tactttgtct
    10621 acttctgctt taattgtttc gaccacttgt ttttcaacca tttcacgtac ttgacggatt
    10681 gtggtgaaaa taccattcgc attggatgaa ccgtgggctt ttacaactgg agcttgaaca
    10741 ccgaacaaac aagcaccgcc atattcgcta taatccattt ttgcttttaa agccattaaa
    10801 tcttttttca agaagcttgc tgcgacttta tttttaaagc cattaagcaa actcattttt
    10861 agcatactta ggaaagcggc gcctgttcct tcgatggact taagtaccat attaccagta
    10921 aatccgtcgg ttacaacaac atctgctaca tccattaata aatcacgcgc ttcgatgttg
    10981 ccgataaatt cgtaagcgtc ttgatttttc ataagttcga atgatttttt tgttaaatca
    11041 tttccttttg tttcttctgt tccaatgttt aaaagcgcta cgcgaggacg atcaatttta
    11101 cgcacttttt ctgcgtaaac cgagcccatt aaaccaaatt gtaataaatg ttctggtttt
    11161 gcttccgcat ttgctcctaa atcaagcata acaaagcctt ttcctgtcac ggttggtagt
    11221 gtaggtgcta gtgctggacg gtcgattcct ttgatacgac caataacaaa caatccagta
    11281 gacattaaag cccctgtgtt tccagctgaa atacaagcat ctgcttctcc gtcttttacc
    11341 gcttgggcag caagtaccat agaagctttt ttcttccgtt ttacagcgcg aactggttcg
    11401 tcatcacttt caattttttc atcggtatgt ataattttta cgcgggtttt atcagttaaa
    11461 tattcattta tttttgtttc gtctccaaaa agaagaattt caacatcttt atattgggcc
    11521 acagctttca tcacacctaa aacaatttct tttggtgcat gatctccacc catcgcatct
    11581 acagcaattt tcattatacg tcagtccttt attttcattt ttgcgttgcg tgatacattt
    11641 caaatttgcc tttaagtaca atttcatctc caacatagct tttcacgtct acgattgtaa
    11701 tagctctgtt gtctgttgcc ggacgtactt ttgcttttgc gatgatgcgt tctccttcgt
    11761 ttacagaacg aacaaagcga acggttgctt gtgttgttag agctatttca tttgggatga
    11821 cggcggttgc taaggaatta gcttgggcaa acaaatgatg cccacgagcg attttatttc
    11881 gtttaaaaac atgctcacta cgcacatcaa aaatcgaaat agcgctcttg ctaagttgaa
    11941 tatcaataat ttcaccaatc acttcatcga tgggaaggct ttttactgca tcggcataat
    12001 tgacactcgc aacatgtttg attcgctctc tgagttcggg gatggaaagt gctactctat
    12061 ctagacgaat agtttgcaca ctgaccccaa atttttctgc aagctgctca tctgttatga
    12121 aaggattttc ttcaatcgca acttgaagtt tcatttgacg atccttttta gaatattttt
    12181 tcatgcacgt atcctcatct ctttttttgt gaaaggtatt aataccagct actaaacagt
    12241 aggtaaaaaa aggaagttac ctctgtagga taacattcag aacttccttt gtatttattg
    12301 gtactttaat atgttattaa aaatcaagcc aagttgcaag tttttttaaa gattgttaca
    12361 taggcttaat ctagtttttg ctccgtgaag acgccttctt cctccagaag tgctactaat
    12421 ttttcgtagt ttttgttctc taacatatct tcttcaaaga tcatgtgaac ggcatcttgg
    12481 cgggcgatct ccagtacccg gtaatcgtga accatatctg ctactttgaa ttctggaaca
    12541 ccactttgtt ttctgccgaa gaaatctcct gggccacgaa gttctaggtc gcgttcgctg
    12601 acaacgaagc catcgtttgt ttctgacata atcatcatac gttctttgcc gacttcggtt
    12661 tttgggtcag caattaaaat acagtaagac tgatctgctc cgcgcccaac tcggccccga
    12721 agttgatgca actgagctaa accaaaacgg tcggcatcgt aaatgaccat catggtagcg
    12781 tttggcacgt ttacaccaac ttccactact gtggtcgaaa caaggcaatc aattttttta
    12841 ttattaaagt cgcgcataat ttgctcttta tctgctggta atagtttacc gtgcattaga
    12901 cctggaatat atttagtgcc ccatttattt tgtagaatgt tgaaaacgtc tatcgcattt
    12961 tgcacatcta gtttttcaga ttctccaatt agcggacaaa tgatgtagac ttggtggcct
    13021 ttgtcgattt ctttttccat aaaaccgata acgcgatcaa gcatttgatg ttttacccag
    13081 taagtttcaa tttcttttcg accagctggg agttcatcga taatcgatac atccatttcg
    13141 ccaaacgctg taatggcaag cgttctagga attggggttg cggtcataaa taaaacatcc
    13201 ggatattccc ctttttcacg aagaacacga cgctgcgcta cgccaaatcg atgttgctcg
    13261 tcagtaataa ctaaacctag gcgatgataa attacttcgt cttgaattaa tgcatgcgtt
    13321 ccgattaaaa catcaatgga gccattttca agcattgcta gtaattctct gcgctgtttg
    13381 cctttcacac tactcgttag taagccaact gtaatatcaa aaggttgcaa cagctctact
    13441 aaggaattcg catgttgctc ggctaaaatt tcggttggca ccatgagtgc gctttggaag
    13501 ccacttttgg cagctgcata catggcaata gatgctacaa ctgttttacc cgatcccacg
    13561 tctccttgta gcaaacgatt catatgaaag tgtgataaca tatcaccgca aatttcattg
    13621 actactcgtt tttgtgcttt tgttagtgga aatggcaagg aatcaatgta atggcgcaaa
    13681 tcttctacat cgtaattaat cgaaattcca cctgatttct cgcgttcaat tttacggaaa
    13741 aactgcattt tcaattggaa taacaagaat tcttcgtaga ccattcggcg cctagcttgt
    13801 ttcaattcct cattattttt aggaaaatgc agaatgcgca ctgcttctag gcgatccatt
    13861 aattgatact tttctaataa attgcttgga ataacttctt ctatatcttg actataacta
    13921 tcaaaagcaa gtctcgtata tttttgcatt gttttattgc gtagcgttcc ttttagacgg
    13981 taaacgcctt ctagttcttc ttcactttcg acagcgccta tttttatttt gctggctgta
    14041 acttgggcgc ggctcttatc ccatttgcca gagattgtca ctgtttcgcc aacacttatt
    14101 ttacttttta aatagggttg gttgaaaaaa tcgattttga tgacttgccc ttcagttgag
    14161 acgcggaaag agagcttgga ttttttgcga ccgtagaaag caacggttgc ctctgttagg
    14221 acttcgcctt gaatggtaat ccgttcttca tgcgccactt ctgataaatc ccgcaaccga
    14281 taatcctcat agcgatacgg gaagttccaa agcaaatcat gcacggtgga taaacctaac
    14341 tcttttaacg ttttcgctgt ttcttcgcca attcctttga tttcagttgt cgggattcgt
    14401 ttaagttcac tcacgcttat cttctggcga cagtccaaaa atcttccgct gaattgcacg
    14461 tccagtcggt gtagccgcca atcctccttc tgccgtttct cttaaagagc ttggcatttg
    14521 taagcctacg cggtgcattg cttcaattac ttcatcacat ggaatgcggc tcttaatacc
    14581 tgcgagcgcc atatctgctg aaataattgc ttgcgaggaa ccaagggcat tacgtttaac
    14641 acatggaact tctacaagcc ctgctacagg atcacacaca agtccaagca tatttttcat
    14701 tgtcatagcc atcgcgtgtg ctgattgttc tggcgtccca ccggctgctg ctacaatcgc
    14761 cgctgaagcc atcgcacttg ctgagccaat ttctgcctga cagccaccag ccgctccact
    14821 tataaaagca ttattcgcaa caacataccc aaaggcacct gctgtgaata aaaagttcac
    14881 catatcctca cgcgacattt ctagacgatc ttttaaggaa aaaagtacgc ccggtacaac
    14941 ccccgcgctt cctgccgttg gtgttgcgca aataacgccc atcgaagcat taacttcatt
    15001 cgtcgcgatt gcttttgcta cagaatcaag taacacttcg cctgataaga agtttccttt
    15061 tttgatatag tcttgcatta ggacggcatc tccgcctgtt aagccagttg tagaagtaac
    15121 tcccgtctca ccttcacgaa tagcttcttc cataatatct aaattccgtt ccatcgcagc
    15181 tgttatttct tcccgcggta aaccagaaat attcatttca cgcttgatca taatttcagc
    15241 aatagttaag ttctcgcgtt cagcgatatc tactaattct gctacagttc taaacattgt
    15301 ccacactcac tttctttacc ctttaccaac atacctgatt tacaactcaa aataaagcca
    15361 aatgcacgtt ttgtttacgc acatttggct ttacacaaat cgagcgaaag ccaccgattt
    15421 actagaaaac tactaaatca tgacacttgc tacttgataa atccctggta attcagcaat
    15481 tttgctaatt aaagcttgtt caacttgttg gtctacttca atgaccatta acgcttcatc
    15541 gccttttact ttacgggaca ctttcatttg tccgatattg attttatggt cggcaatcac
    15601 ggaagatact gcagcaatcg cgccaaattt gtcttgatgt aaaataagga tagctggagc
    15661 agttccagta aattctagtt caaattcgtt taagcgaata atctctactt ttccgccacc
    15721 aatggatgca ccaattaatg tcatttgttg cataccatgt tttaatacta gctttaccgt
    15781 atttggatga ggtggctctt ctacttcttc gataaactga atgcgcatgc cccactcttc
    15841 agcaagcttc ggagattctt tcatgcgcgg atcatctggc tcaaagccga gcaatccgcc
    15901 aatcaaagct acatcagtac catgaccttt ataggttttg gcaaaagaac catataaatg
    15961 aatatctact tgggatggtt gttcattaaa aacagctcgt gcaatggcac caatacgact
    16021 agcgccggca gtatgagaac ttgacggacc aatcattaca ggaccaataa tatcaaatac
    16081 gctattaaat ttcactaaaa tcatcctttc ttctattcat ttacagaggc gtctttattc
    16141 tacagcaaaa atatacggat aaactggttg gtcgccttcg tgaatttcta cttcgacatc
    16201 agggaatgct tctgttactt tatcagcaag cgtttctgct tttgaagtat ctgcatcttc
    16261 accaacaatg atagtaatga tttcgctatc atcatcaagt agtttttcca gtgtttcgta
    16321 agcggcttct tctaatgttg cacaactaac tttgattttg ccttcaacca taccgatgaa
    16381 gctgtctttt ttgatttcga caccttctac tgttgtatca cgtacagctg tcgttacttg
    16441 gccacttgct acgtcttcaa ttgctgcttt cattgcttct gcattagcta ggaaatcttg
    16501 atctgcttgg aatgaaagaa cggcagtaag tccttgtgga attgtttttg tagggatgat
    16561 ttgaacttta tcatctccta gaatttgtgc cgcttgttcc gcagccattt ggatattttt
    16621 attatttgga agaacaaaaa cttgttctgc atttgctgat tcaattgctt ttacgatatc
    16681 ttctgtactt ggattcattg tttgaccacc tgaaagaaca acagacactc ccatgctctc
    16741 aaatagtttc ttcaatcctt ctccagctga aacagtaaca ataccataag ccgctttttc
    16801 ttttgctggc actttgtcat caccaacaat ctcagtatgc tgttcgcgca tattttccac
    16861 tttcatttta agtagactac cgtattgctg accgtagttt agtacttcac caggatgttc
    16921 cacatggaca tgtactttta ctacttcatc gtccgcagct actagtagag aatcccccag
    16981 tttacttaaa tcttgacgga actgttcttc gtcaaaaggt ttttgaccgg gtttgttttc
    17041 gttgattttc acgataattt cggtacagta accaaaatga atatcttccg ttgacataaa
    17101 gtcttgcaca tgacgatgat gttcggcatt aattagctca cccatagatg ccatatagtc
    17161 aggagcttca gccattttgc cagttagtgc gccataaaat ccttcataaa taatgataag
    17221 accttgtcca ccactatcga caacaccaac ttcttttaaa actggaagta aatctggtgt
    17281 tttttctaat gcgactttcc cttgttttaa aattgcttcc attactaatt cgatatcttg
    17341 atgttcactt gctgctgcaa ctccggcttt tgcggcttca cgagctacgg ttaggatggt
    17401 tccttcgact ggcttcatga cagctttgta ggcagtttcc acgcctttaa cgaaagcacc
    17461 agcaaattct tccgcgttta acgtttcttt attttcaatc gctttagaaa atcctcggaa
    17521 aagttgggat aaaataacac cagagttccc tcgggcaccc attagtaagc ctttagccaa
    17581 gtttgctcca acggcactaa ttgtttcttt gtcatttttc gcaacttctt ctgctccact
    17641 tgtcatcgat agattcatat tcgttcccgt gtcaccatct ggaaccggga agacattcaa
    17701 tgaatctaca aaatcagcat tttttgctaa attctctgct ccaagcgcta tcattgctgc
    17761 aaatttctct gagtctaact gatatatact cacttacata atcctcctta agattccttg
    17821 attactcgga caccttgaac ataaatattc actgattcca ctgtaatacc gagtgttttt
    17881 tctagtgtgt atttgacgcg ttcttgaaca ttatgcgcaa cttcggaaat ttttgttcca
    17941 aagctaacaa tgatatacat gtcaatatga ataccttctt cttcttgtct aactataaca
    18001 cctttagtat aattttctct tcttaaaata tctgtcaaac catcacgaat ttggtgtcta
    18061 cttgccattc caacgatgcc aaaattttct tcggcagctc caccagcgat tgttgcaata
    18121 acatcactag taatgtcaat tttgcctagc tttgtgtcga tttcaattgc cattctatat
    18181 tcctccctac ggattatatt ctcgttcgat tattttttag tattgatttt tatttaatta
    18241 taaagtcgtc cctacctatt ttactataat cagggtcctt tggaaagcat atcctccatt
    18301 tgcctgatta aagctacttt tatgctgtca agtaaaaatt ctttgcacta ttttcgcata
    18361 tcctcttgca aagtatactt gtttatgata aattattcta gtgtatgaaa aacaaatgga
    18421 taggttattt taaataaatt atccgaagag ctctgtaagg aggggtaaac tatggctaaa
    18481 gaatgtgtta ttacaggccg caaatcacgt tccggtaaca aacgttccca cgcaatgaac
    18541 tccagcaaac gtacttggaa agctaacttg caaaaagtac ggattctggt taacggcaaa
    18601 cctaaaaaag tttgggtatc tgctcgtgcg cttaaatctg gtaaagtgga acgcgtttaa
    18661 ttgaaggaga aatcaagtgc agcgacaatt atgtcggtgc attttttctt tgccttaaaa
    18721 taaaaaaata caggccgagt gcacctgtat ttctagttaa tcattacttt gtgttaataa
    18781 aatcattcca cttttaaagg aaaattcccc catttgtccc acaaactcat tacttgatag
    18841 agctgaacct actgggtaag tggcattttc gagcgggtag gcgaatcctt ttagtgtcag
    18901 tcctgtcacg tctttcatcg ttgtaaatgc gacatatttc ttatcaggta gtttttcaat
    18961 agtgtagcta cctggcatat acattttgat gtagttatga cggtcaatca tttctacaac
    19021 tggcacagcg cttaaaaatt tcggcttggt caacatcatt agattcgcaa gtagatggtc
    19081 taagcggcct cctgttgcac caaaaatgcg tatcttatct ggattttgct ccatcgccca
    19141 acttaatcca atttccgtat ctgtttcatc tttttctgca ggaaattcgt gtacatctgc
    19201 tactttggtt ttcaaatgag ccagttcttc tttagagagt gaatcaaaat ctcccatcgc
    19261 aacggtcggt acaattccat agtctaacaa acgttttgct ccgcggtcca cgccaatcca
    19321 actaatctct gcgctcgtat attgtgctaa atcaggaatt tcggacgcag gtccaccaac
    19381 catgatatta attattttca tacttgagtc cccttcttcc ctaacaaata agactggaac
    19441 agaggtccca gccctactat tagtttactc gcctacaatg gcacgtaatt tatcaattgg
    19501 tgtttgacga tttttatttc cataaatgta actaccagct acaaagacat ttgcgccagc
    19561 atcacggcat aattttgctg tttcatgatc cacgccgcca tctacttcaa tttcgatatc
    19621 taagcctttt tcatccacta ttttcttgaa agcactaatt ttttctagta cttctggaat
    19681 gaatttttgt ccgccaaaac caggatttac tgtcataaat agaaccatat ccagttcatt
    19741 taaaacgtgt tgtaaaacat cgattggtgt ggctggatta agcactgcgc cagctttcac
    19801 accgtaagaa cggattaatt gtaatgtgcg atgaagatgc gtacaagctt cgacatgcac
    19861 cgtaatgtag tctgctcccg cttttgcaaa ttctggaatg tatgtatccg ggttttcaat
    19921 cattaaatga acatcaagtg gtagttttgt ttctgggcga atggcttgaa caacagcagg
    19981 accaaatgta atatttggaa cgaaatgtcc gtccataacg tcaatatgaa tgtagtctgc
    20041 accgcaattt tctacttctt taatatctct tgcaagattt gcaaagtctg cacttaaaat
    20101 cgaaggagct atttttccca ttcttaatac ctcggctttc tgttttttaa ttcttgtaaa
    20161 atttggatat agtgtttgta gcgaaattct gctatttcat ttgcttcaac agctgttttt
    20221 acagcgcaat tcggctcatt gtcatgcatg caacctcgga atttacagcc actacgacga
    20281 tcttccattt ccggaaaaca aaattgtaat gtttcaggtt gcaagtcatc ccattcgatt
    20341 gaactaaagc caggcgtatc agcgacaaat ccatcgccaa tcggcattag ttcgacgtgt
    20401 ctcgttgtat gttttccgcg accgagtgcg ttcgaaattt ctgctgtttt taaagttaaa
    20461 tcactattta agctatttag gagagtcgac tttcctacac cagattgccc agcgataact
    20521 gcagttttcc cactaatata gtctttaatg gcttctttat ccggttcatc attggtaaca
    20581 aaaacatcat aaccaatcgc ttcgtaaatg tctttgtaaa cagcaatctg ttctttttca
    20641 gattctgatg ccaagtccat tttactaatg caaataactg gcttgatatc ttccttctca
    20701 atagctacta aaaaacgatc cgcaagattc gtggaaaaat ccggctctac tgccgaaaac
    20761 accaaaattg caatatcaat gtttgccacg ggaggccgca caagggcatt ctcccgggac
    20821 attacatcta aaatgtaacc atctgtttta ttttctattt gaaattctac atcatcgcct
    20881 acaagtggag aaatatttcg ttttctaaaa ttccctctcg ctcgacattg atatactttt
    20941 ccttccgaaa atacatagta aaatccgctc aacgctttga taatttgtcc ttccagcaca
    21001 tttcctccgt tctattttta atttggataa gggactgtac cttcatcgat tactttatca
    21061 tcactgataa ttttgtagcc tgcgctagaa ccttcttcaa tttggaaagt tatttctacc
    21121 gaggtatttt gtgtaatgct catttctcgg taagcgctag tcatgctatg gtctttatct
    21181 tgaatgtaga tttgaatttt ctgtggttgt gggttttctt catcacttgg tgtatatggg
    21241 atgttaaatg ttttagttac ttctttgact tgtttttctt ttggtcctgc agaaatgaca
    21301 atctcgattg tatcaccagg attcattgca gttccagctg atggggactg cgaaataact
    21361 tgtccttttt caactgtatt tgaattttct tccttacttg aaactttgag tccaagtggt
    21421 gaggcataat cttctacagc tgttttggta tagccgcgta aatctttaag cgaaattggt
    21481 tctgcacctt tacttacgac aaatttcaca tcggtagatt tagcgactac gtccgttcct
    21541 tgagtcggtg tttggcttat aattaagcct ttttcaactt cagaactata tgcttcctcc
    21601 gaagaaatat tattaaaccc ttgttcttca agtaacgctt ttgtatctgt gtagcttctt
    21661 cctgtatagt cgtccatagt tattttttta gaaccaatgc ttacgaataa attgattttt
    21721 gttccttttt ctttcatttc tccagcttct gggtcggtat taattacttt cccttccgct
    21781 acttcatcac tatttttttc tgccgtttta cctatgacaa agccttcttt ttggagtagc
    21841 gctactgctt ggtcttccgt tttaccagaa acatccggca cagcgacttc atcagggctc
    21901 ttgcctaaaa gccacagtag taaaatacca atgataaaaa tgataatgac agaagaaaca
    21961 atgagagcaa ttttcttttt cttactcatt tttttctttt tcttaccttt gttctcttcg
    22021 ggagcaactt cagccgctgc tacttttcct tctgggacaa tcgttttgtc aaggttttgc
    22081 atcgtgtctt tcgttgcgat gattggaatt gcttttgtat caccatcatc tgttgggaaa
    22141 atatatttag gctcatttaa acggtcttga tttaaacaag tttgcaagtc tttttccatt
    22201 tcttccgcgt tttgataacg taaaaatgga tcttttgccg ttgctttaat gataatattt
    22261 tctaagcttt gaggaatttc tggattttgc gctcttgctg atggaatatc cgcttgcaaa
    22321 tgcttaatag caatagaaac tgcagactca ccgtcgaaag gaacttttcc agttaatagt
    22381 tcatatagca cgattcctag tgaatagatg tctgattttt gagtagccat tccaccacgt
    22441 gcttgttctg gtgataagta atgcaccgaa cctaacaaag aatttgtttg tgtgatggat
    22501 gtttctgaaa gtgccatcgc aatcccaaaa tcagtaattt tcactacgcc atcatgatcg
    22561 attaaaatat tctgtggttt taaatcacga tgaataatgt gatgttgatg ggcaattgcc
    22621 accgcagaaa cgatttgaag cataatatct acagctttat cgtaactgat tgggtgattt
    22681 tcgtgaatat actgttttaa atccattcca tccacatgtt ccattacaat ataatgtaaa
    22741 tcattttctt caccaacatc gtaaacacta acaatattag ggtgaacaag gctcgttgct
    22801 gattgagctt cccgttgaaa ccgacgaata aggttgcttt catcagctaa atcgattcgt
    22861 aaaattttta ctgcaacatc tctatcaaga ataatatcat gcgccaaata cacattggcc
    22921 attccgccgc cgcctattgc atgtaaaatt ttatatcgat cacttaatcg cttaccaatc
    22981 atcatgaagc atccctccct ttctgcgtca gatctcgttc gactaacagc acagttatat
    23041 tatcttctcc cccataagaa ttagcttttg taataaatac atctgctttt tcagaaagag
    23101 ttcttttact ttttaaaatt tcttccattt ctgtttctgg aaccatattc gttaaaccat
    23161 cggaacaaag tagtaacgta tcgctcgttt gaaaagggac aacaaatgtg tccacttcta
    23221 cttttccttc tacaccaagt gcgcgtaaaa gaatattttt ccgcggatga ttcatggcat
    23281 cttctttgct gatttcgcct gttcgaagga gttcatgtac tagtgaatga tcttcggtta
    23341 gttgacgtaa gacatgattt tgaagtaaat aacctctgct atctcctacg ttggcaataa
    23401 cgacttgtga ctgcgccata attgctgcaa caagtgttgt tcccatacca tttaaatcca
    23461 tttcactttc cgaataaaga acaatttctt tattgacttc ttgaattgtt ttttgtagcc
    23521 aagtttcaat ttcttctgcg gtcaaaagtg cggtcgtttc tttccatgca tcgcttagta
    23581 gacgcacagc catttcgctt gccacgtctc ctgcccggtg accacccatg ccgtctgcaa
    23641 caatgacaat cggctggtta tctttatttt caaaaacccc gccgttgtct tcattatgat
    23701 gtcttattct gcctctatct gttctaaatt ctgcatgcat tttaaaagca cctcactatt
    23761 tttcaggact ttacttttct aaggctagaa acgaagaaac catcgcttcc aatatctgtt
    23821 ggtaaaagtt gaataaaatc gtccttcttg atttgcgcca atttttcagg gagtactaca
    23881 ggttctagtg tgaattctgg atgtttttct aagaaagcgc gaagaaccgt ttcattttct
    23941 tccttgtcaa tggtacaagt actataaact aatataccat tttcttttac taattggcta
    24001 acatcatcta aaatcgctaa ttgaatttct gctaatttgt ggatatcttt ttctgttttc
    24061 gcatatttga tgtctggttt tctgcgaaga acgccaaagc cggagcacgg agcatccact
    24121 aaaatacggt caaatgtttc tggttcaaac atggtacttg cggttcttgc gtctaaatgc
    24181 gccgtacgaa tattaagtag ttgcaatcgt ttggcggctt gatcaattag cttggttttc
    24241 ttttcgtgga tatcgagtgc atgaaccatt cccgtgccgt gcattttttc cgcgatatgg
    24301 gttgttttcc cgcctggtgc cgcacaagca tctaataccg tcaaattgtc ttctagttga
    24361 agcgcatagg ctgcgagcat tgagctttcg tcttgaatgc tacatttacc gtctttgtat
    24421 gcttttgttt ctgctacaga tcctttttca acaagtaacg cttcctcgat aaattcatta
    24481 cgtgtcacgg tgattccttg gtcatttagt tctttgatta attgttcagt aggaatttct
    24541 gtttggttga cgcggatact ttggtgtggc gcgacaagga atgctaaacc gatttcacgc
    24601 agtttttcga taccatattg atctgcccac ctttttgcta accattctgg cagacttgtt
    24661 tcaacagcga ttttttgcac agggtctttg atggcatcaa tacttggtac gccttttcga
    24721 ataacattac gcaatacgcc gttgacgaac ttagttacac cttggtgtcc taaatctttc
    24781 gcgatgtcac cagcttcatt taaaatcgcg tgctcaggaa ctttatctaa aaaggttaat
    24841 tgataaacgg acattcttag taagtttttc acccaattgt cgggttcttt attgagaaac
    24901 ggtgctaaat agtaatcaag tgtaattttg cgctgtgttg taccatatac taattcagtc
    24961 aaaagccctt tatcaagcgg atttaacttt tgttttttta atgcgtcatt aattaataag
    25021 tggctgtatg attgattatt ttcgatttta atgatgagtt ctaatgcaat cgcacgaact
    25081 gttttttgtt ttttcattta ttcaccaaac cttgtcgact tgcttaaatt tctgccagct
    25141 ccggtcatga atgagtgaac atccatcttc ggttttcctg ctggttggat tactgttggt
    25201 acgatgagcg tgccgtcgcc tgctacgatt ttaagcgttg ttttatctgc taaaatggca
    25261 cccggttcgc cgtcctcttt tgtttcttca tatgtttctt cataagttgc ttcccagatt
    25321 ttaaatggtt tttcttccag tgttgtataa gccactggcc aaggagacaa tcctcgaatt
    25381 tgattaaaga tagtacgtcc tggttttgtc cagtcgattt tttcttgttc tctagaaata
    25441 ttacgtgcaa aggttacctt ttcagggtct tgtgggattg ccgttatttt tccagctaaa
    25501 aagtcgggta atgtgtccat taataattct gcgcctaatt tgcttaattt atcaaacatg
    25561 gtgccagtat tatcttcatc tgtgatggga attttacgct ggctaatcat atccccagca
    25621 tccaatttct ctaccatata cataatcgta acgcctgtct ccgttttccc gtcaagcagt
    25681 gcgtagtgta caggagcacc tccgcgatac tctggtaaaa gagatgcatg cacattaatc
    25741 gcaccatgct ttggtgattc aagcaaacta tttggtaaaa tttgtccgta agctgctgtt
    25801 acaagtaggt cggcttctag agcaattagt tcttctaatt cgctagatgt ccgtaatttt
    25861 tctggttgat aaactggaat agctagttct aaagcagctt tttttactgg cggtggtgtc
    25921 aaaactcgtt tgcgtccaac tgggcgatct ggctgtgtca caactgcaac tacatcatat
    25981 gtgctggcta attgcgctaa aaccggaaca gaaaattccg gtgttcccat aaaaataatt
    26041 ttagtcattg gtttgctcct tttacattag tacgtaaggc tgtacgtcaa tagttattgt
    26101 taaacctttt tgttggtctt tttgataatg ggtaattagt gtttttagtt ctttttttaa
    26161 gtttggttcg attttatatt taataatgca ctggtagcga tatttgtttt taattctcgt
    26221 gatggtgcta ggaacagggc caagaatcac ggcatctgga ccgagctttc ctcgtaaaaa
    26281 ctgagccatt tcttgaatgg ttcgaatcgc tttcatttca ttttcatcgc tgacattaat
    26341 catggttaag taataaaatg gcgggtagga acccattttt cgtagctgca tttcgtggtt
    26401 ataaaaaccg atgaaatcat gttttttggc gaattcaata ctgtaatgtt ctgggttata
    26461 gctttgaacg atgacttctc ctgtccgctc atgtcgacct gctcgtccac ttacttgagt
    26521 gagaagttgg aaagttcgtt ccgaagcgcg aaagtctggt aaatgaagca ttgtgtcagc
    26581 atttaatacg ccaactaacg taatatctgg aaaatctagt cctttggcaa tcatttgtgt
    26641 tccaagtaaa atatcggctt cgtgattgcg gaagcttttg agtaattttt catgagcacc
    26701 ttttgttcta gtggtatcca cgtccatccg gatgacgcgc gcttctggaa ttaatttggt
    26761 caaactttct tctacttttt gtgtaccggt gccaaaataa cgaatatgct cgccctcaca
    26821 gctcggacat ttttgcggaa cacgttcttc atgtccgcag taatggcatt tcatttgatt
    26881 gctcgattga tgataggtga gcgaaatatc gcagttcgga cattccacaa cataaccaca
    26941 atcacggcac atcacaaaag aagaataacc tcggcgattt agcattaaaa ctgtttgttc
    27001 ttttttggca attcgctctt tgattttttc tagtaattca gtcgaaaatt cggtgcggtt
    27061 ttctttgcgt aattcttcgc gcatgtcgac aacgctcact tctggcatcg cccgatcatt
    27121 gacccggcta ggaagttcga ttaacgtata cacacctttt ttcgctctag caaaagattc
    27181 aagggacggc gtggcgcttc cgagaactac tggacattga tattttgttg cgcgccaaat
    27241 ggctacatct cttgcatgat aacgcggatt atcttcttgt ttgtaactcg cttcgtgctc
    27301 ttcgtcgata ataataatgc cgagattttc aaacggtgca aatacggcgg aacgagcccc
    27361 aacgacaacg cgcgcttctt tgcgttcgat tttgcgccat tcgtcgtatt tttctccgga
    27421 agatagcgca ctatgtagta ccgcgacctc gcttccaaag cggcttttaa atcgctctac
    27481 catttgtggg gtaagggaaa tttctggtac taaaacgatg gcttctttac cctcttttaa
    27541 ttttgcttcg atggtttgta aatagatttc ggttttccca cttccagtaa ccccgtgtat
    27601 taggaatgtt tcttgatcag ttgctgcggt gattttctcg cacgcagttt gttgatctgg
    27661 taataactga agcgattcac ttttttcaaa ttggtggttt tcatagggat cacgcgaaac
    27721 aattttttct tgaatagaaa gtatccctaa gtcgactaat ttttttattg tggcatccgt
    27781 tgtttccgcc tgttttttta actcggctgc cgtaatttcg ttgccttcaa aagcttggaa
    27841 aaatgcgagt acacgtgact gtgctttggc gtttttcggc atatcttcta ttatttcagc
    27901 tagttggtgt ggtgatttga gacagttaac aacgcgaatt tttttactcg tgattttatt
    27961 tttgacttgg tagactactt ccacactacc ttctctgacc catttgccaa tttgtttgag
    28021 caaaccgcgg gcttctgcca ctttccagtc tagtgtttcg tagccttcaa atagctgctc
    28081 taattcttcg ttttcctcat ctaagcgcaa aaaatatttt tcgtattttg ctcgtagcgc
    28141 ggctggtaac atggcttggt aagcagacac ccggaaactc agcgtatctt ctgctaacca
    28201 atcgcctagt tccatcaatt cttcatttaa aacgggggct aaatccatca ccccgtcaat
    28261 gccttttaat tttgggtttt cttctgtttc tccaagagca atgacaaatc cttgtatttt
    28321 acgatttcca aatgggacac ttactcgcat acctggacga ataagttctt ctaaatcttc
    28381 tggaatatag tagtcaaatg gacgatccac ttgcatggct ggaacgtcca caattacttt
    28441 cgcaatatta atcattcgtt cacttcctta aaaagttagc agtttctttg atgatatgtt
    28501 cagcaacttc ttttttatct agtatcggta acgctttgct agaaccatct ttccggtaaa
    28561 atgtcacgat atttgtatca ccagaaaagc ctgctcctgc cacactaata ttgttagcga
    28621 caatcatatc ggcatttttg gatgttaatt ttttacgtgc gtttgcttct agattttctg
    28681 tttcagcggc aaagccaatc acgacttggt ctgcagtttt gtgttgacca atttcgagta
    28741 aaatatcttt ggttcgtttc atttcaatgg caaaatcgcc cggctgtttt ttaatttttt
    28801 ggtctgatac ttttgctggc gtgtaatcgg caactgctgc ggtcatcacg aagatatctt
    28861 gtgacacttt atgttcatcc acagcttgat acatttcttc tgccgattcg acatagattg
    28921 cttctacacc aggtggtacg ggaagtgctt tgcttgtcgt aacgagcgtc acttttgcac
    28981 catgacgagc tgcggattct gcaatactaa agcccatttt gcccgtggaa tggttggtga
    29041 aatagcgtac aggatctaat ttttcgcgag ttgcgccggc tgtaactagc acgtttttgt
    29101 cgcgcaataa atctttatct tcttgaaaaa attcagcaat acgaagaacg attttttctg
    29161 gttcttcaag acgaccgcga ccaacgtagc cacaagctaa gtaaccttct tctggctcga
    29221 taaaacgaac accgtctgcg tataatcgat taatattccg aataactgct gggtgctgaa
    29281 tcatgtggac attcattgct ggcgctaccc aaactggtgc ctctgttgca agaatggttg
    29341 tcgttaccat atcatcagcg attccatttg ccattttgcc aatcacattc gcggtagctg
    29401 gtgcgacaat tactaaatcg gcccaatcag ctaaatcgat atgtgcgaca acacttgatt
    29461 ttttttcgtc aaatgtatct gtgtatacat catttttaga taatacttga aacgaaagcg
    29521 gtggaacaaa ttcctgagca tgttctgtca tcatcacttt gacgtttgct cctgcttgcg
    29581 ttaatttact tgtaagtgcg actgctttat aaacagcaat gccaccggac actgcgagta
    29641 agatattttt tccttgcatt gaaaagtcac ctcattttt
//
LOCUS       DASDYO010000019        28687 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.019, whole genome shotgun sequence.
ACCESSION   DASDYO010000019 DASDYO010000000
VERSION     DASDYO010000019.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 28687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 28687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..28687
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.019"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            141..581
                     /locus_tag="U0290_000753"
     CDS             141..581
                     /locus_tag="U0290_000753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaiI/YqxD family protein"
                     /protein_id="HEM2300801.1"
                     /translation="MPKILVDADACPVKAEIKQVAEHFQLDVIFVASFNHYSVNTNGE
                     NWIFVDTGKESADMRMMNLAKKGDIIVTQDIGLASILLAKGTFVFSNRGELYREEEMS
                     LMLDIRYRHAKDRQQGKYSKGPKAMSDQDRSLFKDRLTTFLQNK"
     gene            601..2481
                     /locus_tag="U0290_000754"
     CDS             601..2481
                     /locus_tag="U0290_000754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEM2300802.1"
                     /translation="MARIPEEVIDQVRNQADIVDIIGNYVQLKKQGRNYSGLCPFHGE
                     KTPSFSVSPEKQMFHCFGCGKGGNVFSFLMEHDGLNFVESVKKVADMSHLDVAIKLPE
                     ERDTSNLPKETSETAKMVEMHQLTAKLYHYILMETEEGTAALTYLKERGMSEQMMTTF
                     QIGFAPNHHATITAFLEKRGMDLQLAGRAGLLSERDDGQMVDRFRNRIMFPITNDRGQ
                     IIAFSGRLFDRDDGPKYLNSPETPVFNKRRILFHFSEARQAIRKQEEITLMEGFMDVI
                     SAEEAGVQNAVASMGTSLTEEHADLIKRLTNRAIICYDGDRAGIEAAYKAGTLLVERN
                     RLDVFVLQLPAGKDPDDFIRASGPEKFKEVYKQQRMTWTAFKIHYLRRERNLQNETDQ
                     IGYIDDCLREIAKLDQAVERELYLKQLADEFELTIETLKQQLQQSLKNSQKSRQMASY
                     NEPPIDDSFMGMMPQEETEMLFSFEQPTQKLSAHTTSEQQLMKAMMESRDNFLLIKQL
                     LGDTTFYHDNYKALYTYLIGYFAEGNDADPTKFMDSVPDATMKGLISSLEMVISPDEQ
                     GKTQFEDYIRSLKRFKLEQKKKELEQELATLNRENDKDNEIRVMLEIVQLNRQLNSGQ
                     LD"
     gene            2576..3700
                     /gene="rpoD"
                     /locus_tag="U0290_000755"
     CDS             2576..3700
                     /gene="rpoD"
                     /locus_tag="U0290_000755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor RpoD"
                     /protein_id="HEM2300803.1"
                     /translation="MSDKTKNTKPVAELSVEQVKEALIEEGKKKGILTYAKIAARLAP
                     FTLDSDQMDEYLEHVGEAGIEVSDDADDEDPDETELVKEETESFDLTDMSVPPGVKIN
                     DPVRMYLKEIGRVDLLTADEEIALAKRIEAGDIEAKGRLAEANLRLVVSIAKRYVGRG
                     MLFLDLIQEGNMGLMKAVEKFDFNKGFKFSTYATWWIRQAITRAIADQARTIRIPVHM
                     VETINKLIRVQRSLLQDLGRDPSPEEIGEEMDLPTEKVREILKIAQEPVSLETPIGEE
                     DDSHLGDFIEDQDATSPSDHAAYELLKEQLEDVLDTLTDREENVLRLRFGLDDGRTRT
                     LEEVGRVFGVTRERIRQIEAKALRKLRHPSRSKQLKDFLE"
     gene            3768..4472
                     /locus_tag="U0290_000756"
     CDS             3768..4472
                     /locus_tag="U0290_000756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenine-N(1))-methyltransferase"
                     /protein_id="HEM2300804.1"
                     /translation="MNEEQLSKRLEKVASYITKNERIADIGSDHAYLPCFAVKNQTAS
                     FAIAGEVVDGPFQSAQKQVRSSGLTEQIDVRKGNGLAVIEKKDAIDTIVIAGMGGTLI
                     RTILEEGAAKLAGVTKLILQPNIAAWQLREWSEQNNWLITSEAILREDNKVYEIMVLA
                     PSEKPVTWTKQEIFFGPCLLKEQSAIFKSKWRHEANTWQNIIQTISNNQPVSTENQAK
                     IRELEHKIALVEDVLK"
     gene            4469..5590
                     /locus_tag="U0290_000757"
     CDS             4469..5590
                     /locus_tag="U0290_000757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nif3-like dinuclear metal center hexameric
                     protein"
                     /protein_id="HEM2300805.1"
                     /translation="MKVANGYEYTAIMEKIAPKKLAMEGDPIGLQVGDLSRKVRKIMF
                     TLDVLEEVVDEAIEKKVDLIIAHHPFLYRPTQHIDTTTKQGKMIKKLIKHDITVFAAH
                     TNLDIAQGGVNDILADLLHLQETTMIEETYSEPYCKIAVYVPENELESIRLALVNNGA
                     GQIGTEYTECTFHTTGIGSFKPGANANPTIGEKEALTSVPEVKIEAIFPQYLTHTITK
                     AVKIAHPYEEPAIDVYTLEMQTYKEGLGRVGMLPKKLGMVSFIDKLKTAFAIDNVRFI
                     GDLKTTVHKVAIIGGDGNKFIHQAKATGADVFITGDVYYHTGHDLLAINLPTIDAGHN
                     IEKVMKGYLKNKMEEQAKILDYEAEFIVSEVNTDPFQFC"
     gene            complement(5636..6631)
                     /locus_tag="U0290_000758"
     CDS             complement(5636..6631)
                     /locus_tag="U0290_000758"
                     /EC_number="1.17.7.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-3-methylbut-2-enyl diphosphate
                     reductase"
                     /protein_id="HEM2300806.1"
                     /translation="MEIIKISPRGYCYGVIDAMVIAKNASLDPNLPRPIHILGMIVHN
                     KHVTDAFESIGIYTVDGANREEILDKITTGTVIFTAHGVSPSVKAKAAAKGLTTIDAS
                     CPDVLHTYNLILEKQAAGYEIIYIGKKGHPEPEGAYGTAPDVVHLVETKADIDALSLL
                     SDNIFVTNQTTMSKWDVADLMDYIKEKFPKAIQHQEICMATQVRQEAVAVQAKGADLT
                     IVVGDPRSNNTARLAQVSIEKAGTKAYRIADITELDIEWIKDAKKVAVTAGASTPTQL
                     VREVLLFLEQFDAADKTTWKRAHNKDFERILPKMKNKYMAEKRRQRLAHLKNGGS"
     gene            6777..8084
                     /gene="cshB"
                     /locus_tag="U0290_000759"
     CDS             6777..8084
                     /gene="cshB"
                     /locus_tag="U0290_000759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD-box ATP-dependent RNA helicase CshB"
                     /protein_id="HEM2300807.1"
                     /translation="MTKKSRFDQFGFQPFIGLAIDKLGFYEPTEVQQKLIPGILKGES
                     IIGQSQTGTGKTHTFILPIINNVNPEKEAVQAVITAPSRELATQIYNEIRKVTKYSEK
                     EIAVQLVIGGTDKQRAIDKLKKQPQIIVGTPGRINDLIREQALFVHTAKTLVIDEADM
                     TLDMGFLNDVDHIAGKMPANLQMLVFSATIPQKLKPFLSKYMENPRYEHIQPKVAASK
                     TVEHRIMATRSRNKLDLLKNVLVGSQPYLAIVFTNTKTTADEVANGLIERGLKVAKIH
                     GDVNPRERKRTMKQIENLDYQYVVATDLAARGIDIQGISHVVNYELPDDLDFYIHRTG
                     RTGRAGHSGIALTLFEPADEDRLNQLEKMGIEFKHVDWKNKEFVTLEDRNRRAKREAK
                     RETADPREIGMRKKAKQKGKPNYKKKINYKMNEIKRRERRKKR"
     gene            8100..8993
                     /locus_tag="U0290_000760"
     CDS             8100..8993
                     /locus_tag="U0290_000760"
                     /EC_number="3.1.21.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribonuclease IV"
                     /protein_id="HEM2300808.1"
                     /translation="MLRLGSHVSMSGKKMLLGASEEAASYGSNTFMIYTGAPQNTRRK
                     PIEELNIEAGLEHMKAHDMADIVVHAPYIINIGNSVKPETFELGVNFLQSEIERTRAL
                     GAKQIVLHPGAHVGEGADKGIKQIIQGLNEALIHDQDVQIALETMAGKGSECGRTFEE
                     IAQIIDGVTHNELLSVTFDTCHTHDAGYDIVNDFDGVLNEFDKIIGVDRLKVLHINDS
                     KNERGAHKDRHANIGFGHIGFDALHYIVHHPQLADVPKILETPYVGEDKASKKAPYKW
                     EIAMLRNGEFDPDLLNKIQNS"
     gene            9010..9936
                     /locus_tag="U0290_000761"
     CDS             9010..9936
                     /locus_tag="U0290_000761"
                     /EC_number="3.6.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="manganese-dependent inorganic pyrophosphatase"
                     /protein_id="HEM2300809.1"
                     /translation="MTKTLVFGHKNPDTDTICSAISYAELKKAQGADIEAVRLGELNS
                     ETAFVLDYFQVTAPRLVQTVANEVSEVALVDHNERQQSVDDIDDVTVTAVVDHHRIAN
                     FETSDPLYYRAEPVGCTTTILLKMFRENEVEVSKTVAGLMLSAIISDTLLFQSPTCTQ
                     EDKVAAQKLAQIADVDIQSYGMEMLKAGADVSKKTVAELLLDAKEFNMNDNKVEIAQI
                     NVVDVNDVLSRRAEVEALMTQNIVDKGLDLYLFVITNILTNDSVGIAIGSKTAVVEEA
                     YGVKFVENQAPLKGVVSRKKQVVPILTDTFAK"
     gene            10081..10854
                     /gene="zurA"
                     /locus_tag="U0290_000762"
     CDS             10081..10854
                     /gene="zurA"
                     /locus_tag="U0290_000762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter ATP-binding protein ZurA"
                     /protein_id="HEM2300810.1"
                     /translation="MNKIIEVNNVSYHYDKEHALENIHFQVAKGSFTGLIGPNGSGKS
                     TMLKLILGVLKKQQGSISLFGEKQADFKDWVKIGFVSQKSNAFNSAFPATVKEVVASG
                     LTKKKGLFKTLNNKDKEDIDYALKRVEMTDYLHRNIGELSGGQQQRVFIARALVSRPE
                     LLILDEPTVGVDVENVKAFYELLAELNRTEEMTLLLVTHDLMAVNTYVNHVISINKRI
                     IFDGSAHEYQHYLADRELEILAEQRRREDACLDCDASPV"
     gene            10829..11707
                     /gene="zurM"
                     /locus_tag="U0290_000763"
     CDS             10829..11707
                     /gene="zurM"
                     /locus_tag="U0290_000763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter permease ZurM"
                     /protein_id="HEM2300811.1"
                     /translation="MIATLLQYDFIRNTFIVGLVIGIVAPLLGSFIVVRKLSLMADAL
                     SHVTLGGIAVSLFLSKTYLPLAALNPLYLGFGFSVVGSLLMEKLRNVYKHFEELAIPI
                     IMSAGMGFSVIFISLANGFNTDLFSYLFGSVSAVSRTDMITIVVTAIIVFIVILSLYK
                     ELFLLSFDEEYAKVSGLKAKVFDVIFMVLVALVIASSMRIVGILLVSSLMTLPVAAAI
                     RIAKGFKQTILLSILFGEIAVIGGLFTAYYLNLAPGGAIVIISVLLLIVTILYQKIRQ
                     KILISKRGEENGTYSN"
     gene            11688..12113
                     /gene="zurR"
                     /locus_tag="U0290_000764"
     CDS             11688..12113
                     /gene="zurR"
                     /locus_tag="U0290_000764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator ZurR"
                     /protein_id="HEM2300812.1"
                     /translation="MGLTATEALMKMKEKGYKHTDKREFLINLLARKNKYLTAKDVLE
                     NMKDDFPGISFDTIYRNLSLFVELGIFEETDLSGERNFRLACTHEHHHHHFICMKCGK
                     TKEIMMCPMDFLTEALPGYQIDGHKFEVYGECPECLQAS"
     gene            12248..13132
                     /locus_tag="U0290_000765"
     CDS             12248..13132
                     /locus_tag="U0290_000765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEM2300813.1"
                     /translation="MTKLKKVMISVIAATLLLLAGCGSSAVVKTDAGSVTQDELYEAM
                     KTTYGNEVVQQLTFKKILEDKYTVTEKEVNAEYKKYEEQYGDSFESTLSSNNLTKTSF
                     KENLEYNLLVQKATEANMNVSESKLKTYYKTWEPDITVRHILVDDEATAKEIQTKLKN
                     GEKFTDLAKEYSTDTATSTNGGLLDPFGPGEMDETFEKAAYALENKDDVSGIVKSTYG
                     YHLIQLVKKTEKGTYAKEKANVKAAYIESQLTTENMIAALKKELKAANIDIKDSDLKD
                     AFADYTSTSSTSSTTTSN"
     gene            complement(13214..13540)
                     /locus_tag="U0290_000766"
     CDS             complement(13214..13540)
                     /locus_tag="U0290_000766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlD domain-containing protein"
                     /protein_id="HEM2300814.1"
                     /translation="MALSSYTLFVIVGCGLVTFIPRVLPFIFVRKLQLPDVVIRYLSY
                     VPLCILTALFVQSLLITRENGFPGINIENLLASLPTILTAILTKNLMWIVIIGIISMA
                     MIRLFA"
     gene            complement(13531..14238)
                     /locus_tag="U0290_000767"
     CDS             complement(13531..14238)
                     /locus_tag="U0290_000767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AzlC family ABC transporter permease"
                     /protein_id="HEM2300815.1"
                     /translation="MEKENELSFYDGVRACLPTVLGYAGIGIAAGVVGKASHLSLLEV
                     TLLAIIVYAGAAQFIISGLLLLQSPISAIIFTTFLINSRHFLMSMAEAPHFKKYSLWN
                     NIGIGALLTDETFGVSMNQIGNKKPVSAKWMHGINVTAYLAWIVACIVGAFIGNWLPN
                     PEQFGLDFALSAMFIGLLYLQVVSDKSKKISTSLFVMILVAVFLILFMRVMTPELAIL
                     TATLLGCLMGVIIERWR"
     gene            complement(14274..15380)
                     /gene="ispG"
                     /locus_tag="U0290_000768"
                     /gene_synonym="gcpE"
     CDS             complement(14274..15380)
                     /gene="ispG"
                     /locus_tag="U0290_000768"
                     /gene_synonym="gcpE"
                     /EC_number="1.17.7.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin-dependent
                     (E)-4-hydroxy-3-methylbut-2-enyl-diphosphate synthase"
                     /protein_id="HEM2300816.1"
                     /translation="MNERIFREKTRPVQVGNLTIGGSEELTIQSMTTTKTHDVEATVA
                     EIHRLEEVGCQIVRVACPDERAANALSAIKKRIHIPLVADIHFDYRLALKAIDAGVDK
                     IRINPGNIGRRDRVEKVVNASKAKNIPIRIGVNAGSLEKKIIQKYGYPTAEGMVESAL
                     AHIKILEDLDFYDIIVSLKASDVNLAIEAYDKASRAFNYPLHLGITESGTQFAGGIKS
                     AAGLGAILSLGIGNTLRVSLSADPVEEIKVAREVLKSFGLSSNAAMLISCPTCGRIEI
                     DLIRIANEVENYIATIKAPIKVAVLGCAVNGPGEAREADIGIAGSNGEGLLFRHGKII
                     RKVPEAIMVEELKKEIDILAEEYFEKKTDLESLR"
     gene            complement(15492..16292)
                     /locus_tag="U0290_000769"
     CDS             complement(15492..16292)
                     /locus_tag="U0290_000769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1189 domain-containing protein"
                     /protein_id="HEM2300817.1"
                     /translation="MNIFKRFWKSLYSPADIASFRNDKIRKSIVYIIVLSFVTFLPLA
                     YFTNITTKNALKVGEETITNEIPDFKVTDGKLVLTDKNAKNIPISIDQDELHIYFDAS
                     GTLDKDDVDNKIASYDSAVAFLSDSIYITAAGVSQSVSYDTAGISDKSDLVHLYNSIE
                     SLAKYFIPIALLVLFIFTLGSVFFRVALYALFGFILSGFGRTGIAFRQNWMIASYSIT
                     LAAVFTMIMEALQIIVPFGMEINMVVSMIFVFLAIRSIPPSDPTILEK"
     gene            16594..17202
                     /locus_tag="U0290_000770"
     CDS             16594..17202
                     /locus_tag="U0290_000770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEM2300818.1"
                     /translation="MTYELPKLPYTYDALEPNFDKETMEIHYTKHHNTYVTKLNEAVA
                     GHPELASKSVEELVANLDSVPEDIRGAVRNHGGGHANHTLFWSILSPNGGGAPTGNLK
                     AAIESEFGTFDEFKEKFNAAAAARFGSGWAWLVVNDGKLEIVSTANQDSPLSDGKTPV
                     LGLDVWEHAYYLKFQNRRPEYIDTFWNVINWDEANKRFDAAK"
     gene            17332..19497
                     /locus_tag="U0290_000771"
     CDS             17332..19497
                     /locus_tag="U0290_000771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein 2"
                     /protein_id="HEM2300819.1"
                     /translation="MKLNFRKKKKDSTKKKRAIIPLRLNILFFIIFILFSVLILRLGI
                     VQIVQGDTYKRQLEETDNVTVSKNVPRGSIYDRNYNLLVGNSAVKSITYTRSQQTQTA
                     ETLHVAQTLEKLITVEPEKLTDRDLKDYWILTHQTESLNRLSAKEQALDSSKAYKIQV
                     DKVTKEDIASLTSEDLKVATIYKKMTTGYAMTESVVKNKDVTDEEIARVSENMDSLPG
                     VDTTTDWNRYYTYDETLRSILGSVSTAKEGLPKDKAEYYLSQGYSRNDRVGKSYLEAQ
                     YESVLAGSKSQSESVLDSKGNIIETVNKYEGSKGKDLVLSVDVEFQKAVEEILKKNIK
                     QGKQYAGSDLFDRAFVVAMDPYSGEVLALAGQKLNDKGEFEDYSLGTFTTAYAMGSAV
                     KGSTILGGIMDGAITNKTVFTDQPIVLKGTKPKSSWFNRTGAGNRPLDPVGALEISSN
                     SYMYQVAMKMGGANYVPNGPLRAPLSTFDDMRYYYNQFGLGVKTGIDLPGEQTGYKGD
                     DQTIGKILDFAIGQYDSYTPLQMAQYVSTIANGGSRIAPSMVKEIRNPSTNGDSVGTL
                     ATANEPKVLNKIGVSESDIKTVQQGFYEVTHGSTGTARTVFTSSDYDVAGKTGTADAF
                     YDGPKEGNKMASVWNTTFVGYAPVEKPEIAISVVVPWIYRPYGTDQKTNMKISKEVFD
                     KYFELKKERSESKKDTSKVEQPINNKEAAAKAQSEQTEN"
     gene            19695..20738
                     /locus_tag="U0290_000772"
     CDS             19695..20738
                     /locus_tag="U0290_000772"
                     /EC_number="1.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate-semialdehyde dehydrogenase"
                     /protein_id="HEM2300820.1"
                     /translation="MTKSYHVAVVGATGAVGTQMIELLEEAATFKIKQVSFLSSIRSA
                     GKKLSFRGEEVTIQEATPESFEGVDIALFSAGGSVSKALAKEAVKRGAIVIDNTSAYR
                     MDPTVPLVVPEVNEKALFSHKGIIANPNCSTIQMVAALEPIREAFGLNRIIVSTYQAV
                     SGSGVSAIQELKDGSRAVLDNKEFTPQIMPVKGDKKHYPIAFNALPQIDVFTENDYTY
                     EEMKMINETKKIMEDNTIKVSATCVRIPVVSGHSESVYIEVDKEGITAKEIQNELKNA
                     PGIVLEDDPANQVYPQAVQAAGKKEVFVGRIRADIDDPKGFHMWIVSDNLLKGAAWNS
                     IQIAESLVKLAII"
     gene            20750..21961
                     /gene="dapG"
                     /locus_tag="U0290_000773"
     CDS             20750..21961
                     /gene="dapG"
                     /locus_tag="U0290_000773"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEM2300821.1"
                     /translation="MKIIVQKFGGTSVQNEKSRLMAFNHIKQVLKEGYKVVVVVSAIG
                     RYGDPYATDTLLELIGAKNTKLTAREQDTLLSVGETISASVFTNMLKEANIKAEAFSG
                     GQAGIITSDDHLNAKITEVDTARLKDALTNLDVAVVAGFQGITANGDISTLGRGGSDT
                     SAAALGVSLQADYIDIFTDVDGMMTADPRIVEHARSLPRVSYNEVSNMAYQGAKVIHP
                     RAVEIAMTAKIPMRIRSTYLESTGTLVTSLTNDSDHFDVKERIVTGVAHVTNLTQISV
                     QTDTVKAQQLAFEILADAGISLDFINISTNSVIFTVPEEKSHVVKQLLEDADLQTTVR
                     QACAKVSIVGAGITGVPGVTAKIVGALSEKNIPILQSADSHTTIWVLVKEEDLISAVN
                     ALHDVFCLEIK"
     gene            21976..22857
                     /gene="dapA"
                     /locus_tag="U0290_000774"
     CDS             21976..22857
                     /gene="dapA"
                     /locus_tag="U0290_000774"
                     /EC_number="4.3.3.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-hydroxy-tetrahydrodipicolinate synthase"
                     /protein_id="HEM2300822.1"
                     /translation="MDLGKVITAMVTPIHPEKDKVCKKRIHHLVNHLIKNGSDGLVIA
                     GTTGESPTLSHDEKIKLFRQVIETNDGRAKLIAGTGSNNTAETIAFTKEVAELGGIDA
                     VLIVAPYYNKPNQDGLYAHFAAVSEASDLPVVIYNIPGRSVVNIEPETIIRLAKLPNI
                     VGVKESSGNLDNISKIIAETSDDFQVYSGDDSLTLPILAVGGNGVISVASHVVGNEMQ
                     EMIQAFERGEVQKAAQIHRELLPLMNGLFSVPNPAPTKYLLNQQGISVGPVRLPLVDL
                     NAEQGTKLQAILEGLSK"
     gene            22877..24544
                     /locus_tag="U0290_000775"
     CDS             22877..24544
                     /locus_tag="U0290_000775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEM2300823.1"
                     /translation="MTIKKAKNIKIIPLGGVDESGKNLYVVEIDEDIFILDAGLMFPE
                     NELLGIDIVIPDFKYLEENKDRVKAVFLTHGHEDAIGALPYLLQKIKAPVYGTELTIA
                     LAKSALKEHRKLRFKNFHVVNEETTLSFSKIDVSFFRTTHTIPDSVGIVLETSEGSIV
                     YTGDFKFDQSAKDGYASDLSHIAEFGEKGVLALLSDSSEAEHPGTTSSDSLIEEEIRH
                     AFRMADGRIIVACVASNLIRLQQVLDASVATKRKVAIVGKELERVFEIAGSLGKIVIE
                     EDLIVPLKELKKYSDDEITIIETGNLGEPIQSLQLMTKGNHPQFNIKPGDTVYITTTP
                     SPSLETMMAKTMDMLYKAGAKVLTMSNNLFISGHASQEDLKLMINLLKPRYFVPVHGE
                     YRMLISHAKLAHEVGMAKSEVFIVGKGEILEYKNDKMTAGNRVYSGNTLIDGLGVGDV
                     GNIVLRDRKLLSEDGIFIVVVTLNRKSKTITSGPEIISRGFIYVRESEHLIEESSKVV
                     TKIVEKNLQETGFEWAKLKQDIRDQLNRYLFEQTKRRPMILPIIMEV"
     gene            24633..25973
                     /locus_tag="U0290_000776"
     CDS             24633..25973
                     /locus_tag="U0290_000776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2300824.1"
                     /translation="MAKFTYDVVIIGSGASGTTVAFEAQAAGLKVAIVEERSWGGTCV
                     LRGCDPKKVLVGAREARNLSTRLRGKGIKQAATISWTDLMAFKETFVENVPESRLENF
                     QEAGIETFFGAASFQDSHSLQVGDDLIQANKIVIATGATPSTLKVEGQEYIQTSDDFL
                     SLEKLPDSVVFIGGGYISFEFASIALATGREVHIIHHNSEPLKKFDPDFVAALVSNMK
                     EEGIHFHFDTDITKVENKGEKLHIHGKDGFSLQTDLIIGATGRKPNIAHLSLENANID
                     YTKKGIIVNEKLQTTNNPHIYACGDVAATKGAPLTPVVSMEAAFVAKNVIGGDEKMIY
                     PAIPSVVFTSPKLASIGISAEEAKAHPEKYQIKNHDTTNWYTYKRTNEQIALAKIIED
                     RESGQIKGAHFLSEEADYMINYVAILMKANLTLADLQSVIFAYPSPASDLTALN"
     gene            26026..26676
                     /locus_tag="U0290_000777"
     CDS             26026..26676
                     /locus_tag="U0290_000777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300825.1"
                     /translation="MEIWIIAGICAFLIFIAGIVILFFPARRKIGAILTSAGMLLMVG
                     SIIGIIVSFSHYQQVQNDVFNYSSKGTSQATPEETKTYKVNFEDSADNIKKKITTVTV
                     EKKETYSTSASKPVDGSITIALEITNNAVKTLETYPNQGQLEANKLDLNGGDAVLSNF
                     DTTEIKPGETAKGKIVFPVDNLDKVSDISWISYSFLSYLKDSSTPITTETGKIELK"
     gene            complement(26715..28316)
                     /locus_tag="U0290_000778"
     CDS             complement(26715..28316)
                     /locus_tag="U0290_000778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2300826.1"
                     /translation="MLTVNNVGLRYGDKKLFEDVSIKFLPGNCYGLIGANGAGKSTFL
                     KVLSGELDSQSGNVHIGSGERLAVLRQDHFQYDNELVLNTVIMGHERLYKIMDEKNAI
                     YMKEDFSDEDGIRAAELEGEFAELDGWEAESDAAVLLNGLGIPTDLHGKLMKDLTGGE
                     KVKVLLAQALFGKPDILLLDEPTNHLDIRAIHWLEEFLINFDNTVIVVSHDRHFLNKV
                     CTHIADLDFSKIKLYVGNYDFWYESSQLAQTMMGDRNKKKEEKMKELQDFIARFSANA
                     SKSKQATSRKKMLEKITLEDIQPSSRRYPFIQFKPDREVGNDLLTVTNLSKTIDGVKI
                     LDNLSFSINRNDKVALVGDDEVAKTVLFQILAGEMEPDEGSYKWGITTSQSYFPKDNS
                     EFFEENDMSLVEWLRQFSPEDDSEAFLRGFLGRMLFSGDEVLKKVRVLSGGEKVRCML
                     SKMMLSGSNVLLLDEPTNHLDLESITALNNGLEAFKGAMIFASHDHQLLQTIATRIIN
                     LSKDQFYNKEISYDEYLKEVMNVAE"
     gene            28456..>28687
                     /locus_tag="U0290_000779"
     CDS             28456..>28687
                     /locus_tag="U0290_000779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEM2300827.1"
                     /translation="MNYEQILQEKVALCLTLQAAKETFPFDKKTHALTVGGKIFALIH
                     MYHGDLYVSVKCQPERIDLLRDEYLSIKPGYHL"
BASE COUNT         9796 a         5192 c         5482 g         8217 t
ORIGIN      
        1 actgcttgta aaaattagtt acttcccgta taatctaaat tcgcgtgtga aaaagccaaa
       61 tctacgaata atattaaaaa aacgggttaa aaactcgttt tttaacttgc cttcatagat
      121 tttaagagag gatggaatat gtgccaaaaa ttttagttga tgccgatgct tgcccggtaa
      181 aagcagaaat aaaacaagtc gccgaacatt ttcagttaga cgttattttt gtggcttctt
      241 ttaaccatta ctctgtaaat acaaacggag aaaattggat ttttgtggat actggaaaag
      301 aatcagcgga tatgcgaatg atgaatttag ccaaaaaagg cgatattatc gtaacacaag
      361 atattggcct agctagtatt ctacttgcaa agggtacatt tgtcttttct aatcgcggcg
      421 aactttaccg agaagaagaa atgtcattaa tgttagatat tcgctataga catgccaagg
      481 acaggcaaca aggtaaatat agcaaaggtc caaaagcaat gagcgatcaa gatcgttctc
      541 ttttcaaaga ccgattgacg acatttttgc aaaataagta aataggagtt gactgtcaaa
      601 atggcgcgga ttcctgaaga agtaattgat caagtccgga atcaagcgga tatagtcgat
      661 attatcggta attatgttca gttaaaaaaa caaggacgta attattctgg cttatgtcct
      721 ttccacggtg aaaaaacgcc atccttttct gtctcaccag aaaaacagat gttccattgt
      781 tttggttgtg gtaagggagg gaatgttttt tcttttctaa tggagcatga cggactcaat
      841 tttgttgaat cggtaaaaaa agtggcagac atgagtcatt tagatgtggc tatcaagctc
      901 cctgaagaac gagatacaag taatttgcca aaagaaactt ctgaaacagc aaaaatggtg
      961 gaaatgcacc agcttactgc caaactttac cattatattt taatggaaac tgaagaaggt
     1021 acagcagcat taacttattt aaaagagcgt ggtatgtctg aacagatgat gaccactttc
     1081 caaattggtt ttgcccctaa tcaccatgca acaattactg cttttctaga aaaacgtggc
     1141 atggatttac aattagctgg cagggctgga cttttgtccg aacgtgatga tgggcaaatg
     1201 gtggatcgtt ttcgtaatcg gattatgttt ccaattacga atgatcgtgg acaaattatt
     1261 gccttttctg gccgcttatt tgatcgtgat gatggtccta agtatttaaa tagccctgaa
     1321 acacctgttt tcaataaaag acgaatattg tttcattttt cagaagcaag acaagctatt
     1381 agaaaacaag aagaaattac gctcatggaa ggatttatgg atgttatttc cgcagaagaa
     1441 gcaggtgttc aaaatgcggt agcttcgatg gggacaagct taacggaaga acatgcagat
     1501 ttaattaaac ggcttactaa ccgggcgatt atttgttatg acggtgacag agccggaatt
     1561 gaagcagcct ataaggcggg cacacttcta gttgaacgga atcgtttaga tgtttttgtt
     1621 ttgcaacttc cagctggaaa agatcccgat gactttattc gagcaagtgg tccagaaaaa
     1681 ttcaaagaag tttataagca acaacgaatg acttggacag cttttaaaat tcattattta
     1741 cgtagagaac gtaatttaca gaatgagaca gatcaaattg gttatattga tgattgttta
     1801 cgcgaaattg cgaaactaga tcaagccgtc gaacgcgaat tatacttaaa acaactagca
     1861 gatgaatttg aattaacgat agaaacatta aaacaacaac tacagcaatc actaaaaaat
     1921 agtcagaaat cacgacaaat ggctagttat aatgaaccac caatagatga ttcttttatg
     1981 ggaatgatgc ctcaagaaga aacagaaatg ctattttctt tcgagcaacc aacccaaaaa
     2041 ctatctgccc atacaacctc agagcaacaa ctcatgaaag caatgatgga gagccgagat
     2101 aattttcttt taattaagca acttcttggt gacactacgt tttatcatga taattacaaa
     2161 gcgctttata cctatctaat tggttatttt gcagaaggta atgatgcaga tccaacgaaa
     2221 tttatggata gtgttcctga tgctacaatg aaaggactta tcagtagcct cgaaatggtt
     2281 attagtcccg acgaacaagg gaaaacccag tttgaagact atattagaag tctaaagcgg
     2341 tttaaattag aacaaaagaa aaaagaactt gagcaagagc tagcgacttt aaatcgtgaa
     2401 aatgacaaag ataacgaaat tcgtgtcatg ctcgaaatcg tccaactcaa ccgtcagtta
     2461 aacagcggcc aattggatta ataacgtttt aaaaccgcta aatgatggta ttattaccta
     2521 agagaagcct tttaataagg ttagcggcat tttggaagga ggaatacagg cagttatgag
     2581 tgataaaaca aaaaacacaa aaccagttgc tgaactaagt gttgagcaag taaaagaagc
     2641 cctgatagaa gaaggtaaga aaaaggggat tttaacttat gcaaaaatcg ctgccagatt
     2701 agctccattc actttggatt ccgatcaaat ggatgagtat ttagaacatg ttggtgaagc
     2761 aggaattgaa gtttctgacg atgcagatga tgaggatccg gatgaaacag aacttgtaaa
     2821 agaagaaacc gaatcctttg atttaacaga tatgagtgta ccaccaggcg taaaaattaa
     2881 tgaccctgtt cgcatgtatc tgaaagaaat tggtcgagta gacttactta cagcggatga
     2941 agaaattgcc ttagcaaaac gtatcgaagc tggcgacatt gaagccaaag gacgtcttgc
     3001 agaagccaac ctgcgccttg ttgtaagtat tgcaaaacgt tatgttggtc gcggtatgtt
     3061 attccttgat ttaattcaag aaggtaacat gggactaatg aaagccgttg agaaattcga
     3121 cttcaataaa ggatttaaat tcagtaccta tgcaacgtgg tggattcgtc aagcgataac
     3181 ccgtgcgatt gcggaccaag ctagaacaat ccgtattccg gtgcatatgg ttgaaacaat
     3241 caacaaacta atccgtgtac aacgctcctt attacaagat ttaggccgcg atccttcacc
     3301 agaagaaatt ggtgaagaaa tggacttacc aactgaaaaa gttcgggaaa tccttaaaat
     3361 cgcacaagag ccagtttccc ttgaaacacc aattggtgaa gaagacgatt cacatctagg
     3421 cgattttatc gaagaccaag atgcaacttc accatccgat cacgcagcat acgaattact
     3481 aaaagaacaa ttagaagatg tgcttgatac attaactgac cgtgaagaaa atgtacttcg
     3541 cttacgtttt ggtctagatg atggtcgtac gcgcacttta gaagaagttg gtcgtgtatt
     3601 tggtgtaact cgtgaacgga ttcgtcaaat tgaagccaaa gctttacgta aattacgtca
     3661 tccgagccgt agcaaacaac taaaagactt cctggaataa agcacaaccg ggcaggagga
     3721 caaaccgttc tcctgccttt ttaatgaaaa tgaaagtagg gaaccaaatg aacgaagagc
     3781 aattatcgaa gcgactcgaa aaagtggctt cttacataac aaaaaatgaa cgaatcgcag
     3841 acatcggaag cgatcatgct tatttacctt gttttgcagt taaaaatcaa acggcttcgt
     3901 tcgctattgc tggcgaagta gttgatggac cttttcaatc tgcacaaaaa caagttcgtt
     3961 cttctggctt aacagaacaa attgacgtta gaaaagggaa cggtttagct gttatcgaaa
     4021 aaaaggatgc gattgataca attgtgattg caggcatggg tggcacgttg atacgtacta
     4081 ttttagagga aggtgcagca aaattagccg gtgtaaccaa actaatttta caacctaata
     4141 ttgcagcctg gcaattaaga gagtggtccg aacaaaacaa ttggcttatt acttctgaag
     4201 caattttacg cgaagataat aaagtttatg aaatcatggt gttagctccg tctgaaaaac
     4261 cagttacttg gactaagcaa gaaatatttt tcggaccatg cttattaaaa gaacaaagcg
     4321 ccattttcaa aagcaagtgg cgccatgaag caaatacatg gcaaaatatt attcagacta
     4381 tttctaacaa ccaaccagtt tcaacagaaa accaagcgaa aattcgtgaa ttagaacata
     4441 aaatcgcatt agtagaggat gtgctaaaat gaaagtcgca aatggctatg aatacacagc
     4501 aataatggaa aaaatcgcac ccaaaaaact tgcaatggaa ggcgatccta ttggtttgca
     4561 agtaggagat ttatcgagaa aagtaagaaa aatcatgttt accttagatg tattggaaga
     4621 agttgttgat gaagctattg agaaaaaagt tgatttaatt attgctcacc atccgtttct
     4681 atatcggcca acgcaacata tcgatacgac aactaaacaa ggaaaaatga ttaaaaaatt
     4741 aatcaaacat gatattactg tatttgccgc acacacaaac ctagatattg ctcaaggtgg
     4801 tgtaaacgat attttagcag atttactcca tttacaagaa acaacgatga ttgaggaaac
     4861 ctattcagaa ccatattgca aaattgctgt ttatgttcca gagaatgaat tagaaagcat
     4921 tcgtttagct cttgtaaata atggtgccgg acaaataggg acagaatata cagaatgcac
     4981 attccacacg accgggattg gttctttcaa accaggagca aacgctaacc caactatcgg
     5041 cgaaaaagaa gcactgactt ctgttcctga agttaaaata gaagctatat tcccacagta
     5101 tttaacccat actatcacta aagcagttaa aattgctcat ccatatgaag aacctgcgat
     5161 tgatgtatat acgcttgaaa tgcagactta taaagaagga ttaggtcgcg ttggaatgct
     5221 tccaaaaaaa ctcggcatgg tttcatttat tgataaatta aaaactgctt tcgctattga
     5281 taatgtccgt tttattgggg atttaaaaac aacagtccat aaagtagcaa tcattggtgg
     5341 cgatggaaat aaatttatcc atcaagcaaa agccactggt gcagatgttt ttattaccgg
     5401 tgatgtttat tatcacacgg gacatgattt attagctatt aatcttccaa ctattgatgc
     5461 tggccataat atcgaaaaag tgatgaaagg ctatcttaaa aataaaatgg aagaacaagc
     5521 aaaaattttg gattatgaag cagaatttat tgtatcagaa gtaaatacag atccattcca
     5581 attttgttga taaaaaaacc gagtaactcc cttaaataaa ggagttgctc ggtttttagc
     5641 ttccgccatt ttttaagtga gctagccgtt gacgtctttt ttcagccatg tacttattct
     5701 tcattttggg aagaatacgc tcaaagtcct tattatgcgc acgtttccaa gtagttttat
     5761 ctgccgcatc aaactgctcc aaaaacaata gcacttcacg aacaagttgt gttggcgtac
     5821 ttgctccggc tgtaactgct actttttttg cgtctttgat ccactctata tctaattccg
     5881 taatatcggc aattcggtac gcctttgtgc cagctttctc tatcgaaact tgggctaaac
     5941 gagcagtatt attacttcta ggatcgccga caacaatagt tagatcagca cctttggctt
     6001 gtactgcaac agcttcttgc cgcacttgag tggccataca tatttcttga tgttgaatag
     6061 ctttcgggaa tttttctttt atataatcca ttaaatcagc gacatcccat ttgctcatcg
     6121 ttgtttggtt cgtcacaaaa atgttatcgg aaagtaatga aagagcatca atgtctgctt
     6181 ttgtttctac taggtgaaca acatcaggcg ctgttccgta tgcgccttct ggttcaggat
     6241 gtcctttttt tcctatataa ataatttcat agccagccgc ttgtttttct aaaattaaat
     6301 tataggtatg aagtacatct gggcaggatg cgtcgattgt cgttaagcct tttgctgctg
     6361 ccttcgcttt gacagaagga gagacaccat gtgcggtaaa tataaccgtt ccagtggtta
     6421 ttttatctaa aatttcttct cgattagcgc catctactgt ataaatacca atggattcaa
     6481 atgcatcagt aacatgttta ttatgaacaa tcatacctaa aatatgaatt ggtcgaggca
     6541 agttcggatc aagtgatgca tttttagcaa tcaccatcgc atcgatgact ccgtagcaat
     6601 aaccacgagg agatattttg ataatttcca ttcgaaaaca tcctcatttc tgttttagat
     6661 tctttattta gtataataga cttagcctgt tttgacaaag ttgtcttaac acgcgcacga
     6721 atgtccaatt atgtgctata atggctacta ggtatagaac ggagtggaaa tattttatga
     6781 cgaagaaatc aaggtttgac caatttggct ttcaaccttt tattggactt gcaatagata
     6841 aattaggatt ctatgagcca acagaagtac aacagaagct aattccaggc attttaaaag
     6901 gggaaagtat cattggccaa tctcaaacag gtacagggaa aacccatact tttattttgc
     6961 caattattaa caatgtgaat cctgaaaaag aggcagtaca agcagttatt acggcaccaa
     7021 gtcgtgagct tgctactcaa atttataatg aaattcgcaa agtaaccaaa tacagtgaaa
     7081 aagaaatcgc tgtacaactt gttattggtg gcacagacaa acaacgtgcg attgataaac
     7141 tgaaaaagca accacaaatc attgtcggaa cgcctggtcg tatcaatgac ttaattcgtg
     7201 agcaagcgtt atttgttcat acagcgaaaa cgctcgttat tgacgaagca gatatgacac
     7261 ttgatatggg cttcttaaac gatgtcgacc atattgctgg aaaaatgccg gctaatttac
     7321 aaatgcttgt tttttccgct acaattccgc aaaaattaaa accattttta agcaaatata
     7381 tggaaaatcc acgttatgag catattcagc caaaagtggc tgcttcaaaa acagtggaac
     7441 atcgcattat ggccactcgt agccgtaata aacttgattt acttaaaaat gttttagttg
     7501 gttcacagcc ttatttagcg attgttttta caaatacaaa aacaacagct gatgaagtag
     7561 caaacggttt aatcgaacgt gggctaaaag tagcgaaaat ccatggtgat gtaaaccctc
     7621 gtgaacgtaa acggacgatg aaacaaatcg aaaacttaga ttatcaatat gttgttgcga
     7681 cagatttagc tgctcgtggt attgatattc aaggaattag tcatgtcgtg aactatgagt
     7741 tgcccgatga cttagatttc tacattcacc gtactggtcg tactggtcgt gccggacatt
     7801 ctggtattgc acttacatta tttgaaccag ctgatgaaga ccgcttaaac caattagaaa
     7861 aaatgggaat cgaatttaag cacgttgact ggaaaaataa agaatttgtt acacttgaag
     7921 accgcaaccg ccgtgccaaa cgtgaagcga aacgcgaaac agctgaccct cgtgaaatcg
     7981 gtatgcgtaa aaaagcaaaa caaaaaggta aaccaaacta taaaaagaaa attaactaca
     8041 aaatgaacga aatcaaacgt cgtgaaagac ggaaaaaacg ataagtgagg aatgaattta
     8101 tgctaagatt aggttctcat gtatcaatga gtggtaagaa aatgcttctt ggcgcaagtg
     8161 aagaggcagc ttcttatggc tcaaatacgt ttatgattta tactggcgct ccgcaaaaca
     8221 cgcgtagaaa gccaattgaa gaattgaata ttgaagccgg cttagaacac atgaaagcac
     8281 atgatatggc tgacatcgtc gttcacgcgc cgtatatcat caatattggc aattcagtga
     8341 agccagaaac ctttgaacta ggtgttaatt tcttgcaatc tgaaattgaa cgtacgcgtg
     8401 cgcttggtgc caagcaaatc gtacttcatc ctggcgctca tgttggtgaa ggggcagaca
     8461 aagggattaa acaaattatc caaggtctta acgaagcatt aatacatgat caagatgtac
     8521 aaattgcttt agaaacaatg gctggaaaag gttctgaatg cggacgtact tttgaagaaa
     8581 ttgctcaaat tattgatggc gtaacgcata atgaattatt atccgttact ttcgatactt
     8641 gtcacacaca tgatgctggt tacgatattg taaatgattt tgacggggtg ttaaatgaat
     8701 tcgataaaat tatcggtgtt gatcgcttaa aagtgttaca tatcaatgat agcaagaacg
     8761 aacgtggtgc acataaagac cgacacgcta acattggttt cggtcacatt ggctttgacg
     8821 cacttcatta tattgtgcat catccgcaat tagcggacgt cccgaaaatc cttgaaacac
     8881 cttatgttgg tgaagataag gcatcgaaaa aagcaccata taaatgggaa atcgcgatgt
     8941 taagaaatgg cgaatttgac ccagatttat taaataaaat ccaaaatagt taaaaaggag
     9001 acgaaaataa tgacaaaaac acttgtattc ggtcataaaa atccagatac agatacgatt
     9061 tgttctgcca ttagttacgc agaattaaaa aaagcacaag gagcagatat tgaagcggtt
     9121 cgtttaggag agcttaatag tgaaacagct tttgttcttg attatttcca agtaacagct
     9181 ccacgcctag ttcaaacagt tgcaaatgaa gtttctgaag ttgcacttgt tgatcataat
     9241 gaacgccaac aaagcgtaga cgatattgac gatgtaacag ttacagctgt agttgaccat
     9301 caccgtatcg caaacttcga aacatctgac ccactttatt accgtgctga accagttgga
     9361 tgtacaacaa caattcttct aaaaatgttc cgcgaaaatg aagtagaagt aagtaaaaca
     9421 gttgcaggtc taatgctttc cgcaattatt tcagacacac ttctttttca atcgccaacg
     9481 tgcacgcaag aagacaaagt agctgctcaa aaattggcgc agattgcaga tgttgatatt
     9541 caatcgtatg gcatggaaat gctaaaagca ggagcagatg ttagcaaaaa aacagtagct
     9601 gaactcctac ttgatgcgaa agaatttaac atgaacgata acaaagtaga aattgctcaa
     9661 atcaatgtag tggacgtaaa cgatgtgctt agccgtcgcg cagaagtgga agcacttatg
     9721 acgcaaaata ttgtggataa agggcttgat ttatatctat tcgtcatcac taatatcctt
     9781 actaatgact ctgttggaat cgctattggt tcaaaaacag cagtcgtaga agaagcatac
     9841 ggtgttaaat ttgttgaaaa ccaagcacca cttaaaggcg ttgtatctcg taaaaaacaa
     9901 gttgttccaa ttttaacgga cacatttgct aaataattat attaacctgg aaaagctaag
     9961 caacttttcc aggttttctt gtctaatttt ttaattcgaa gtaattacga tttacatttt
    10021 ctctattatt ttatatacta gtaaaagcgg ctagcaaatg ctgtcaaagg agaaacatga
    10081 atgaacaaaa tcatagaagt aaataatgta agctatcatt atgataaaga acatgcctta
    10141 gaaaacattc attttcaagt tgcaaaaggc agttttactg gtttaattgg ccctaatggt
    10201 tcaggtaaat caactatgtt aaagctaatt cttggtgtac tcaaaaaaca acaaggaagc
    10261 atctccttat ttggagaaaa acaagcagat ttcaaagact gggtcaaaat cggcttcgtt
    10321 tctcaaaaat cgaacgcctt taactccgca ttcccagcca ctgtgaaaga agttgtcgca
    10381 agcggattaa caaagaaaaa aggcttattt aaaacattaa acaataaaga taaagaagac
    10441 atcgattacg ctttaaagcg agtagaaatg acagattatc tgcatcgcaa catcggggag
    10501 ctctctggtg gccaacagca acgcgttttt attgcacgtg cgctagttag cagaccagaa
    10561 cttttaattc tagatgagcc aaccgttgga gtggatgtcg aaaatgtcaa agctttttat
    10621 gaacttttgg ccgaattaaa ccggacagaa gaaatgacac ttttactcgt gacacatgat
    10681 ttgatggcag tgaatacgta tgtcaatcat gttattagca ttaataagcg tattattttt
    10741 gacggttccg cacatgaata tcaacattat ttggctgacc gcgaacttga aatattagca
    10801 gaacagcgta gaagggagga tgcttgcctt gattgcgacg cttctccagt atgattttat
    10861 tcgtaataca tttattgtag gacttgtgat cggtattgta gctccattac ttggaagttt
    10921 tatcgttgtt agaaaacttt ctttaatggc agatgcactg agtcatgtga cgcttggtgg
    10981 gattgcagta agtttatttt taagtaaaac ttatttacca ttagctgccc ttaatccgtt
    11041 atatcttggc tttggttttt ccgttgtagg atctttatta atggaaaaac ttcgcaacgt
    11101 ctataagcat tttgaggaac tagcaattcc aattattatg tcggctggta tgggtttctc
    11161 tgttattttt atttccttag caaatggctt taatacagat ttgtttagtt atttatttgg
    11221 gagtgttagt gctgttagcc gcacggatat gattacaatt gtcgttactg cgattattgt
    11281 atttatcgtt attttatctt tatataaaga actatttctg ttatcatttg atgaagaata
    11341 tgccaaagtt tcaggtctaa aagccaaagt attcgatgtt atatttatgg tattagtcgc
    11401 tcttgtaata gcgtcttcta tgcgaatcgt tggtatttta cttgtttcgt ctttaatgac
    11461 attgcctgtt gcagcagcta ttcgtattgc taaaggattt aaacaaacca ttttattatc
    11521 gattttattt ggtgaaattg ccgttatcgg tggtctgttt accgcttatt acttgaattt
    11581 agcgccgggt ggagccatcg ttattatatc cgtgctactt ttaatcgtca ccattttata
    11641 tcaaaaaata cgtcaaaaaa tcttaatttc aaaacgaggt gaggaaaatg ggacttacag
    11701 caactgaagc actcatgaaa atgaaggaaa aaggctataa acacacagat aaacgtgaat
    11761 ttctaattaa cttactagcg aggaaaaata aatatttgac ggcaaaagat gtcttagaaa
    11821 atatgaaaga tgatttcccg ggaataagtt ttgatactat ttaccgcaat ctctctttat
    11881 ttgtagaatt aggtattttt gaagaaacag atctttctgg tgaacgcaat ttccgtttag
    11941 cttgtacaca cgagcatcac catcatcatt ttatttgcat gaaatgtggg aaaacaaaag
    12001 aaattatgat gtgcccaatg gattttttaa ccgaagcttt acccggttac caaattgacg
    12061 gtcataaatt cgaggtttac ggcgaatgtc cagaatgttt acaagcctct taatagcaaa
    12121 aggtccgaat tccgggcctt ttttatttta tgcgtaatgt tcacagttat ttcatatttg
    12181 tttcttattc tggacacttt ttatcgctaa agtaagaagt agccgaaaga cgaaggagag
    12241 gaacagtttg acaaaattaa aaaaagtgat gatttccgta atagcagcta cattactact
    12301 actcgctggt tgtggaagca gtgctgttgt taaaacagat gcaggaagtg tcacacaaga
    12361 tgagctttac gaagcgatga aaacgactta tggaaatgag gtcgtgcaac aacttacttt
    12421 caaaaaaatc ttagaagata aatacaccgt aacagaaaaa gaagtaaatg cagaatacaa
    12481 gaaatacgaa gaacaatacg gtgactcatt tgaatcaacg ttatcctcta ataatttaac
    12541 aaaaacttct ttcaaagaaa atttagagta taatttactt gttcaaaaag caacagaagc
    12601 aaacatgaat gtaagtgaaa gcaagctaaa aacctactac aaaacttggg aaccagatat
    12661 tactgtgcgc catattttag tagacgatga agctacagcg aaagaaattc aaacgaaatt
    12721 aaaaaatggt gaaaaattca ctgatttagc taaagaatat tctacagata cagcaactag
    12781 tacaaatggt gggcttttag atccatttgg tcccggtgaa atggacgaaa catttgaaaa
    12841 agcagcctat gcattagaaa ataaagatga tgtaagtggc attgtgaaat ctacctacgg
    12901 atatcacttg atccaattag tgaagaaaac agaaaaaggc acttacgcta aagaaaaagc
    12961 aaacgtaaaa gccgcatata ttgaatctca attaaccaca gaaaatatga tagctgcact
    13021 caaaaaagag ttaaaagctg ctaatattga tattaaagat agtgatttaa aagatgcatt
    13081 tgcagattac acaagtacat cttcaacaag ttccacaaca acatctaact aatattactt
    13141 cggatccacc tatacaaaaa gccctttact ggttttgatt cccgtcaaaa acacactcca
    13201 gtaaagggct tttctatgca aataaacgaa tcattgccat ggaaataatt ccaataatca
    13261 caatccacat taaattttta gtcaaaatag ctgttagaat ggtaggaagt gatgcaagta
    13321 aattctctat attaattcct ggaaaaccat tttcccttgt aattaataaa ctttgaacga
    13381 acagcgcagt gaggatacaa agggggacat acgataaata acgaatcact acatctggaa
    13441 gctgtaattt acgcacaaat ataaacggca agacacgcgg tataaacgtc acaagtccac
    13501 atccaacaat gacaaataaa gtataggaac ttaacgccat ctctctataa tcactcccat
    13561 caaacatccg agtaaggttg cagttaaaat agctagttct ggcgtcatca cacgcataaa
    13621 gagaattaaa aatacagcga ctagtatcat gacgaacaaa ctcgtactta tttttttgct
    13681 tttatcactc actacttgta aatatagcaa accgataaac attgcagaca acgcaaagtc
    13741 taaaccaaat tgttctggat ttgggagcca gttgccaata aatgccccaa cgatacaagc
    13801 gacaatccat gccaagtagg cagttacatt tattccgtgc atccatttag cactaacagg
    13861 ttttttatta ccaatctgat tcatcgaaac cccaaacgtt tcatccgtca gaagggcacc
    13921 aatcccaata ttattccaca aagaatactt cttaaaatga ggagcttccg ccatactcat
    13981 taaaaaatgc cttgaattaa ttaaaaaagt agtaaaaatg attgctgata tcggactttg
    14041 tagtaataac aaaccagaaa taataaattg cgccgcacct gcataaacga taatcgcaag
    14101 tagcgtcact tctaaaaggc ttaaatggga tgcttttcct actactcctg cagcgatacc
    14161 aatcccagca taaccaagga cggtaggaag gcaggctcta acaccatcat aaaaactaag
    14221 ctcattttct ttttccaaca aaaatccccc ttgaaacaaa aaccccaata cgattatcta
    14281 aggctttcca aatctgtttt cttttcaaaa tattcttctg ccaaaatatc aatttctttc
    14341 ttaagttctt ctaccataat ggcttctggt acttttcgga tgattttacc atgtctaaaa
    14401 agaaggcctt ctccatttga accagcaatt ccgatatctg cttcgcgagc ttctccggga
    14461 ccgttgaccg cacagccaag cacggctact ttaatcggag ctttaatcgt tgctatgtaa
    14521 ttttccactt cattagcgat acgaatcaaa tcaatctcta ttcgaccgca agtagggcag
    14581 gagataagca tggcggcatt cgaggaaagg ccaaacgatt ttaaaacctc ccgggccact
    14641 tttatctctt ccacaggatc agcactcaaa gatacccgta atgtatttcc aatgcccaaa
    14701 ctgagtatcg ctcctaaacc agcagcactt tttattcctc cagcaaactg cgtaccagat
    14761 tctgtaattc caagatgtag aggataatta aatgcgcgac tagctttatc ataagcttca
    14821 attgctaaat tcacatcaga agctttcaaa gaaacaatga tatcataaaa atctaaatct
    14881 tcgagaattt taatatgggc aagtgcactt tctaccattc cttcagcagt agggtaaccg
    14941 tatttttgaa taattttctt ttctaaacta ccagcattaa ccccaatacg gattggaata
    15001 ttttttgctt tagaagcatt aaccactttt tccacccgat cacggcgacc gatgttacca
    15061 ggattaatcc ggattttgtc aacacctgca tcaatagctt taagtgctag tcggtaatca
    15121 aaatgaatat ctgccacaag aggaatatga atccttttct tgatggcact aagagcattg
    15181 gctgcacgct catcaggaca agcaactcgc acaatctgac aacccacctc ttctaatcgg
    15241 tgaatttccg ctactgttgc ttcgacatca tgtgtctttg tagtagtcat gctttggata
    15301 gttaattcct cactaccacc aatagttaaa ttacctactt ggactggccg agttttttcg
    15361 cgaaagattc tttcattcaa agagaccgct cctttagact agcttttatt ttttatcata
    15421 ccattttcat gaaacaaaat cacgtgaatg atgccacaaa aaagccacct acgtgagcaa
    15481 gtggctatca tttatttctc taaaattgta gggtcgcttg gaggaattga acgaatcgca
    15541 aggaaaacaa aaatcatact cacgaccata ttaatttcca ttccaaaagg aacaataatt
    15601 tgtaaagcct ccataatcat agtgaaaact gctgccaggg taatactgta agaagcaatc
    15661 atccaatttt ggcggaaggc gataccagtt cggccaaatc cagaaaggat aaatccgaaa
    15721 agtgcataca gtgctactcg gaagaagacc gagcctaacg taaagataaa gagcactagt
    15781 aaagcaattg gaataaagta tttagctaaa gactcaatcg aattatataa atgaactaaa
    15841 tctgacttat cactaattcc tgctgtgtca taactaacag attgcgaaac accagctgca
    15901 gtaatataaa tactatctga aagaaaagct accgcgctat cataagaagc gattttgtta
    15961 tctacatcat ccttatccag tgttccagaa gcatcaaaat aaatatgtag ttcatcttga
    16021 tcaatcgaga taggtatatt ctttgcattt ttatctgtta acactaattt gccatcagtc
    16081 actttaaaat cggggatttc attggtgata gtttcttcgc caactttaag tgcatttttt
    16141 gttgtaatgt ttgtaaaata tgctaatgga aggaatgtta caaatgataa aacaataatg
    16201 tacacgatac ttttcctaat tttatcattt cgaaacgatg ctatatccgc aggggagtat
    16261 aaactcttcc agaagcgttt aaaaatattc attctttttt caacacctcg cctaatggtt
    16321 taacttttga gtttcaggga aaaagataca tgtatgtgca aaagaacgta ctttttccac
    16381 ctaaacttaa tcatagctcg aaatggttgc aaaatcaatg ttgaaacatc actgagcaga
    16441 aaaattgcaa gcatttcagg agcatggtag gctaaatggt gtaagaagaa actgttttta
    16501 aggttgatag tagttctatt gaaatgggac atgaaacttt tgccttatac gtcatttctt
    16561 ttcacgtaaa aacaatacaa ggaggaattt ttaatgactt acgaattacc taaattacct
    16621 tatacttatg atgctttgga gccgaatttt gataaagaaa ctatggaaat tcactataca
    16681 aagcaccaca atacttatgt gacaaaacta aatgaagcgg ttgctggtca tcctgaactt
    16741 gcaagcaaat ctgtggaaga attagtagct aacttagata gcgttcctga agatattcgc
    16801 ggcgctgtcc gtaaccacgg tggcggtcat gctaaccata cattattctg gtctattctt
    16861 agcccaaatg gtggcggcgc tccaactggt aatttaaaag cagcaatcga aagcgaattc
    16921 ggtacttttg acgaatttaa agaaaaattc aatgcagctg ctgcagcacg ttttggttct
    16981 ggctgggctt ggctagtagt taatgatggc aaattagaaa tcgtttctac agctaaccaa
    17041 gattctccac taagcgatgg caaaacacct gttcttggct tagatgtttg ggaacatgct
    17101 tactacctta aattccaaaa tcgtcgtcct gaatatatcg acacattttg gaatgttatt
    17161 aactgggatg aagctaacaa acgttttgac gcagctaaat aataatcaca agactcactt
    17221 cggtgggtct ttttttattt ctaatgaatt tctaatgaac ttacagtgga aaaatcatgt
    17281 tatttcagct acaataggga aaggtattat tgaaaagtga ggtaactatg cgtgaaacta
    17341 aattttagaa aaaagaaaaa agattccact aagaagaaac gcgccatcat tccactacgt
    17401 ttaaatattc tattctttat tatttttata ttattctccg tgttaatttt acgtcttggt
    17461 attgttcaaa ttgtgcaagg ggatacgtac aaacgtcaat tagaagaaac agataacgta
    17521 acagtttcca aaaacgtacc acgtggtagc atttatgacc gaaattacaa tttgctggtt
    17581 ggtaattcag cggttaaatc tattacttac acacgtagtc aacaaacaca gactgcagaa
    17641 actctacatg tagcccaaac attagaaaag ctaattactg tcgagcctga aaagttaact
    17701 gaccgtgatt tgaaagatta ctggatttta acgcatcaaa ccgaatcgct aaaccgctta
    17761 tcagcgaaag aacaagcgct tgattcatct aaagcctaca aaatccaagt tgacaaagtg
    17821 acaaaagaag atatcgctag cttgaccagt gaagacttaa aagtagcaac catctataag
    17881 aaaatgacaa ctggatatgc tatgactgaa tctgttgtga aaaataaaga tgtaacagac
    17941 gaagaaatcg cacgtgtcag tgaaaatatg gacagtttac ctggtgtaga tactactaca
    18001 gactggaatc gttattacac atatgatgaa actttacgct caattttagg ttctgtttcc
    18061 acagctaaag aaggtctacc aaaagacaaa gcggaatact acttatctca aggatatagt
    18121 cgtaatgatc gcgttggtaa aagctatcta gaagctcaat atgaaagtgt gctcgctgga
    18181 tcaaaatctc aatcagaaag cgtacttgat tctaaaggta atattattga aactgtcaac
    18241 aaatacgaag gctccaaagg gaaagattta gttctttctg ttgatgttga atttcaaaaa
    18301 gcagtagaag aaattctcaa aaaaaacatc aaacaaggta aacaatatgc tggttcagat
    18361 ttatttgacc gcgcattcgt tgttgccatg gatccatatt ccggagaagt ccttgcacta
    18421 gcaggacaga aactaaatga caagggtgag tttgaagatt attcccttgg tacatttaca
    18481 actgcctacg caatgggctc tgctgtcaaa ggttctacta tccttggtgg tattatggac
    18541 ggcgctatta caaacaaaac tgttttcact gaccaaccaa ttgtactaaa aggaacaaaa
    18601 ccaaagagct catggtttaa cagaaccgga gctggtaata gaccacttga tcctgtagga
    18661 gctttagaaa tttcttctaa ctcctatatg taccaagttg caatgaaaat gggtggcgca
    18721 aactatgtac caaacggacc tcttagagca ccacttagca cctttgacga tatgcgttac
    18781 tactacaacc aattcggtct aggtgtaaaa actggcatcg accttccagg tgaacaaact
    18841 ggttataaag gggacgacca aacaatcggt aaaattctcg atttcgctat cggacaatat
    18901 gactcctaca caccacttca aatggctcaa tatgtttcta ctattgccaa tgggggctca
    18961 agaatcgctc ctagtatggt aaaagaaatt agaaatccaa gtactaatgg tgactctgtt
    19021 ggaacacttg caacagctaa tgaaccaaaa gtattaaata aaatcggtgt ttctgaaagt
    19081 gatatcaaaa cagtacaaca aggcttctat gaagtaacac atggttcaac aggtaccgca
    19141 agaactgttt tcacttcaag tgattacgat gtcgctggta aaacaggcac cgcagatgcg
    19201 ttctatgatg gaccaaaaga aggtaacaaa atggccagtg tttggaatac aacattcgtc
    19261 ggttatgcgc cagtggaaaa accggaaata gcaatttccg ttgttgttcc ttggatttat
    19321 cgtccatatg gtacggacca aaaaacaaat atgaaaatct ccaaagaagt attcgacaaa
    19381 tacttcgaac ttaaaaaaga acgctctgaa tcgaaaaaag atacttcaaa agtagaacaa
    19441 ccaattaaca acaaagaagc tgctgcgaaa gcacaatcag aacaaaccga aaattaatca
    19501 aaaaccactt tcatttattt ggaagtggtt tttttatttc aaactaacaa acaatttaaa
    19561 aaaatagttg ctaatgcgta gaaaaaactg cgaaaaggct ttgtttatgg tatgataaag
    19621 taagtgtaaa attaaccaga tttctgtttt taggcaggaa tacgaggatt aaattgaagg
    19681 aggaattgta aactatgaca aaaagctatc atgtcgcagt tgtaggtgca actggtgcag
    19741 ttggtaccca aatgattgaa ttactagaag aggcggcgac ttttaagata aagcaagttt
    19801 cattcttgtc ttctattcgt tctgctggaa aaaaactatc cttccgtggt gaagaagtaa
    19861 ctattcaaga agccacacct gaaagttttg aaggcgtaga tatcgcttta tttagcgctg
    19921 gtggttctgt atcgaaagca cttgcgaaag aagcagttaa acgtggagct atcgttattg
    19981 ataacacgag tgcatatcgt atggatccaa cagttccttt agtcgttcca gaagtgaatg
    20041 aaaaagcact tttctcacat aagggtatta ttgctaatcc taactgttcc actattcaga
    20101 tggtagcagc cctcgaaccg attcgagaag cattcggctt aaatcgtatt attgtttcca
    20161 cttatcaagc tgtttctggc tctggtgtaa gcgcgattca agaattaaaa gatggtagca
    20221 gagcagtttt agataacaaa gaattcactc cacaaatcat gcccgttaaa ggggacaaaa
    20281 aacattatcc aattgctttt aatgcattgc cacaaattga cgttttcaca gagaatgact
    20341 atacatacga agaaatgaaa atgatcaatg aaacaaaaaa aatcatggaa gacaacacaa
    20401 taaaagtttc tgctacgtgc gttcgtatcc cagtagttag cggacactct gaaagtgttt
    20461 atatcgaagt ggataaagaa ggcataactg ctaaagaaat ccaaaatgaa ctaaaaaacg
    20521 cacctggtat tgtcctagaa gatgacccag caaatcaagt ttacccacaa gctgttcaag
    20581 ctgcaggtaa gaaagaagtc ttcgttggtc gtattcgtgc tgacattgac gatcctaaag
    20641 gttttcatat gtggattgtt tctgacaact tactaaaagg tgccgcatgg aattcgattc
    20701 aaatagctga aagtttagtt aaactagcga ttatttagag gtgtaagtaa tgaaaattat
    20761 tgtccaaaaa tttggcggaa catccgtaca aaatgaaaaa tcacgtttga tggcattcaa
    20821 tcatatcaaa caagtactaa aagaaggata taaagttgtt gttgtcgttt cagccattgg
    20881 tagatacgga gatccttatg cgacagacac actattagaa cttattggtg ctaaaaatac
    20941 aaagctaaca gcaagagaac aagatacttt actctcggta ggcgaaacta tttcagcatc
    21001 tgtatttacc aatatgttaa aagaagcaaa tattaaagca gaggcgtttt ctggtggtca
    21061 agcaggcatc attacatcag acgaccattt aaatgcaaaa atcacagaag tggatacagc
    21121 tcgtttgaaa gatgcattaa cgaaccttga tgtagctgta gttgctggct tccaaggtat
    21181 tactgcaaat ggggatattt ccacattagg acgcggagga agtgatacat ccgcagcggc
    21241 tctaggagtt tcgttacaag cagactatat tgatatcttt acagatgtag atggaatgat
    21301 gacagccgat ccacgtattg tagaacacgc acgttcactt ccacgagtaa gttacaacga
    21361 agtaagcaat atggcgtatc aaggtgcaaa agtgatccat ccacgtgcag ttgagatagc
    21421 gatgactgca aaaataccaa tgcgaatccg ttctacttat ttggaaagca ctggaacact
    21481 tgttacttca ttaaccaatg attcagatca ttttgacgtg aaagaacgaa tagtaaccgg
    21541 cgtagctcat gtaaccaatt taacacaaat atccgtacaa acagatacgg taaaagcgca
    21601 acaactcgct tttgaaatat tagcagatgc aggaatcagc cttgatttca ttaacatctc
    21661 taccaactct gtcattttta cggtgccaga agaaaaatct catgtagtaa aacaactatt
    21721 agaagatgca gacttacaaa caactgtacg acaagcttgt gcgaaagttt ctattgttgg
    21781 cgccggaatc acaggcgttc ccggtgttac tgcaaaaatc gttggcgcat tatctgaaaa
    21841 aaatatccct attttacaat cagcggatag tcatactact atttgggtat tagtaaaaga
    21901 agaggactta atttcagcag tcaatgccct tcatgacgta ttttgtttgg aaattaagta
    21961 aggaggaaat gaaagatgga tttagggaaa gtaattacag caatggtgac accaattcac
    22021 ccagagaaag ataaagtatg caaaaaaaga attcatcatc tcgtgaatca cttaatcaaa
    22081 aatggctcag acggtttagt aatcgctgga acaactggcg aatctccaac tttatcccat
    22141 gatgaaaaaa taaaattatt ccgccaagta attgaaacaa atgacggacg tgcaaaatta
    22201 attgctggaa caggctccaa taacacagct gaaacaattg cttttacaaa agaagttgct
    22261 gaactcggtg gaattgacgc tgttttaatc gttgcaccgt attacaataa accaaatcaa
    22321 gatgggttat acgcgcactt tgctgcggtt tctgaagctt ctgatttacc tgtagttatc
    22381 tataatattc cgggtcgtag tgttgttaat atcgagccag aaacaattat ccgcctagca
    22441 aaattaccta atattgttgg tgtaaaagaa tctagcggta acttggataa tataagtaaa
    22501 atcattgctg aaacctcaga cgatttccaa gtatacagtg gggatgatag cttaacttta
    22561 ccaatccttg cagttggtgg aaacggcgtt atttctgttg ctagccatgt tgtaggaaat
    22621 gaaatgcaag aaatgattca agcatttgag cgtggagaag ttcaaaaagc tgctcaaatc
    22681 caccgagaat tattgccact catgaacggt ttattctctg taccaaaccc agcaccgaca
    22741 aaatatttac tcaatcaaca aggcattagc gttgggcctg taagactacc acttgtagat
    22801 ttgaatgctg aacaaggaac gaaattacaa gctatattag aaggactttc taaatagttc
    22861 aaaggaggtc tacgctttga caataaaaaa agcgaaaaac ataaaaatca ttccactcgg
    22921 cggtgtcgat gaaagtggca aaaatttata tgtagtagaa atagacgaag atatctttat
    22981 attagatgcg ggcttaatgt tcccagaaaa tgaattacta ggaattgata ttgttattcc
    23041 agatttcaaa tatttagaag aaaataaaga tcgtgtaaaa gctgttttcc taacacacgg
    23101 tcacgaagat gcaattggag cattgccata cttgcttcaa aaaatcaaag caccagttta
    23161 tggtacagaa ttaacgatag cactggcaaa atcagcactt aaagaacacc gtaaactacg
    23221 cttcaagaat ttccatgtcg ttaacgaaga aacaacttta tccttttcaa aaattgatgt
    23281 ttcctttttc cgtacaacgc acactattcc tgattctgtt gggattgttc ttgaaacaag
    23341 cgaaggatct attgtttata caggggattt caaattcgat caatcagcga aggacggcta
    23401 tgcttctgat ttaagccaca ttgcagaatt tggcgaaaaa ggggtactag ctttactttc
    23461 agatagttca gaggctgagc accctggaac aacgtctagc gatagtttaa ttgaagaaga
    23521 aattagacat gcgttccgaa tggcagacgg cagaattatc gtcgcttgtg tagcttctaa
    23581 tttaattcgc ttacaacaag tactcgatgc atccgttgca accaaacgta aagtcgctat
    23641 tgttggtaaa gaattagagc gcgttttcga aattgctggc agtttaggta aaatcgtcat
    23701 tgaagaagac ttaattgttc cgttaaaaga acttaaaaaa tatagcgatg acgaaattac
    23761 tattattgaa acaggtaatc taggagaacc aattcaatca ttacaattaa tgactaaagg
    23821 aaatcatcca caattcaaca tcaaacctgg tgatactgtt tacattacga cgacgccatc
    23881 accatctctt gaaacaatga tggctaaaac aatggatatg ctctataaag caggtgcgaa
    23941 agtgctaact atgagcaata atctattcat ctctggtcat gcaagtcaag aagacttaaa
    24001 attaatgatt aacttattaa aaccaagata ttttgttcca gttcacggag aatatcgcat
    24061 gttaatcagt cacgctaaat tagctcatga agttggtatg gcaaaatcag aagtatttat
    24121 cgtaggtaaa ggtgaaattt tagaatataa aaatgataaa atgacagctg gtaatcgcgt
    24181 atactctggt aatactttaa ttgatggttt aggtgttggt gatgttggta acatcgtgct
    24241 acgcgaccgt aaattgctct cagaagacgg gattttcatt gttgtagtaa cacttaatcg
    24301 taaatcaaaa accattactt caggaccaga aatcatttca cgtggcttta tttatgtgag
    24361 agaatcagaa catttgattg aagaatcttc caaagttgtt acaaaaattg ttgaaaaaaa
    24421 tcttcaagaa accggctttg aatgggcgaa attaaaacaa gacattcgtg accaattaaa
    24481 tcgctactta tttgaacaaa caaaacgacg tccaatgatt ttaccaatta ttatggaagt
    24541 ctagaatgaa ctgctgcaca ttcgtgtgtg gcagtttttt tcgtttgaaa gtgaaatcag
    24601 acgggaaaac aagctaggaa ggagtgattt aaatggcaaa atttacatat gatgtagtaa
    24661 taatcggaag tggcgcaagt ggtacaacag tagcatttga agcacaggca gctggattaa
    24721 aagtagcaat tgtagaggag cggagttggg gtggaacgtg tgtcctcaga ggatgcgacc
    24781 ctaaaaaagt tctcgtcgga gcaagagaag caagaaatct ttctaccaga cttcgcggca
    24841 aaggtattaa gcaagcagcg acaattagct ggacagattt aatggcattt aaagaaactt
    24901 ttgttgagaa tgtgccagaa agtcgtttgg aaaactttca agaagccggg attgaaacat
    24961 tctttggtgc agctagtttc caagattccc attccttaca agtcggcgat gatttaatac
    25021 aagctaataa aattgtcatc gcaacaggag caacaccaag cacgttaaaa gtagaagggc
    25081 aagaatacat tcaaaccagt gatgattttt tatcacttga aaaactccct gattctgtcg
    25141 tgtttattgg tggtggctat atttcatttg aatttgcctc catagcactc gcaacaggga
    25201 gagaagtgca tattatccac cataatagtg aacctttaaa aaaatttgat cctgatttcg
    25261 tggctgcatt agtgtccaat atgaaagaag aaggtatcca tttccatttt gacacagata
    25321 ttacgaaggt tgaaaataag ggggaaaaac tgcatattca tggcaaagat ggattttcat
    25381 tacagacaga tttaattatt ggggcaactg gtagaaaacc aaatatcgcg catttatcat
    25441 tggaaaatgc caacattgac tacactaaaa aaggcattat cgttaatgaa aaacttcaaa
    25501 ccactaataa ccctcatatc tacgcatgtg gcgatgtcgc ggcaacaaaa ggagcacctt
    25561 taacacccgt tgtcagcatg gaagcagcat ttgttgctaa aaatgtcatt ggcggcgacg
    25621 aaaaaatgat ttatccagca ataccaagcg tcgtttttac gagccccaaa ctggcaagca
    25681 ttggtataag cgcagaagaa gcaaaagcgc atccagaaaa atatcaaatt aaaaatcacg
    25741 acacaacaaa ttggtatact tataaacgaa ccaatgaaca aattgcgctc gcaaaaatca
    25801 ttgaagatag agagtcgggg caaatcaaag gcgctcattt tcttagtgaa gaagcagatt
    25861 atatgataaa ttacgttgcc atcttaatga aagctaatct aactttggct gatttacaat
    25921 ctgttatatt tgcctatcca tctccagcaa gtgacttaac tgctttgaac tagaggctaa
    25981 atatgttata gtgagggaga aattcgcata aaaggagcaa ataagatgga aatttggatc
    26041 attgccggaa tatgtgcttt cttaattttt atcgcaggta tcgtaatttt atttttccca
    26101 gccagacgga agattggagc tattttaact agtgcaggga tgttattaat ggttggctcc
    26161 attattggta tcattgttag tttttcacat tatcagcaag tacaaaatga tgtgtttaat
    26221 tattcttcta aaggaacaag tcaagctacc ccagaagaaa cgaagacgta taaagttaac
    26281 tttgaagatt ccgcagataa tattaagaaa aaaatcacta ctgtgacggt cgaaaaaaaa
    26341 gaaacttatt caacatccgc aagtaagcca gtagacggta gtattactat cgctttagaa
    26401 attaccaaca atgcagttaa aactctcgaa acctatccaa accaaggaca actagaggca
    26461 aacaagttag atttaaatgg aggagacgct gttttatcta attttgatac aactgaaatt
    26521 aagcctggcg aaactgccaa aggaaaaatc gtttttcccg tagataattt agacaaagtt
    26581 tctgatattt catggatttc ttatagtttt ctaagctatc tgaaagattc atccacacca
    26641 atcacgacag aaactggcaa aatcgaacta aaataaaaac aatatcccga aaatgggata
    26701 ttgttttttt gtcattattc tgctacgttc attacttctt ttagatactc atcataagaa
    26761 atttctttat tgtaaaattg gtcttttgat aagttaatga tgcgcgttgc gattgtttgt
    26821 aataactgat gatcatgaga agcaaaaatc attgcgcctt taaatgcttc caagccgtta
    26881 ttcaatgctg taatggattc taagtccaag tggttagtag gttcgtctag taaaagaacg
    26941 ttagaacctg aaagcatcat tttggataac atacaacgaa ctttttctcc accagataag
    27001 acgcgtactt ttttaagtac ttcatcgcca ctgaatagca tacgaccaag gaagccgcgt
    27061 aagaatgctt cactgtcatc ttctggagag aattgacgta accattctac aagactcatg
    27121 tcgttttctt caaagaactc tgagttatct ttcgggaaat agctttggct tgttgtaatt
    27181 ccccatttat aactaccctc atcaggttcc atttcaccag caaggatttg gaaaagaact
    27241 gttttagcaa cctcatcatc gccaactaaa gcaactttgt catttcgatt aatcgagaaa
    27301 gaaagattat caagaatctt cacaccatcg attgttttag acaagtttgt tactgttaga
    27361 aggtcatttc caacttcacg gtctggtttg aactgaatga aagggtaacg acgactagaa
    27421 ggttgaatat cttccagcgt gattttttcg agcatttttt tacgacttgt tgcttgtttt
    27481 gatttcgatg cgttcgcact gaaacgagca ataaagtctt gtaattcttt cattttttct
    27541 tcttttttct tgttacgatc gcccatcatt gtttgagcta attggcttga ttcataccag
    27601 aaatcatagt ttccgacata taatttaatt ttgctgaaat caagatccgc aatgtgcgta
    27661 cacactttat ttaagaagtg acggtcatgg gatactacga taacagtatt atcaaagttg
    27721 attaaaaatt cttctaacca gtgaatcgca cggatgtcaa ggtggttggt aggctcatcc
    27781 agaagtaaga tatctggttt accgaataaa gcttgtgcaa gaagcacttt cactttttct
    27841 ccaccagtta aatctttcat tagttttccg tgtaagtcag tagggatacc taggccgttt
    27901 aataaaacag cagcgtcaga ttctgcttcc caaccatcta attcagcaaa ttcgccttct
    27961 agttctgcag cgcggatacc atcttcatca ctgaaatctt ctttcatata aatggcattt
    28021 ttttcgtcca taattttgta tagacgttca tgtcccatga ttactgtgtt aagaactagt
    28081 tcattatcat actgaaaatg atcttggcga aggacagcta gacgctcacc tgaaccaata
    28141 tgcacattac cactttgtga atcaagctcg ccagaaagca cttttaggaa cgttgattta
    28201 ccagcaccat ttgctccaat aagaccataa cagttacctg gtaaaaattt aatcgaaaca
    28261 tcttcaaata gctttttatc gccgtagcgt aagccaacat tatttacagt taacattttc
    28321 ttcctccaat actaagttac ttcttcttga aatcagaaaa agcacaatta ctactatttt
    28381 aacatggtta gtgtagcaaa gaaagcatac acacataaat aaatgttata atatcaaaat
    28441 aaggaggaga gccggatgaa ttacgaacaa attttacaag aaaaagtcgc gctttgtctg
    28501 actttgcaag ctgccaaaga aacatttccg tttgataaaa aaacgcacgc tttaacagtt
    28561 ggtgggaaga tatttgcgct catacatatg tatcacgggg atttatatgt tagcgttaaa
    28621 tgtcagcctg aaagaattga tttgttgcgt gatgaatatt tgagcataaa accaggttac
    28681 catttaa
//
LOCUS       DASDYO010000020        27658 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.020, whole genome shotgun sequence.
ACCESSION   DASDYO010000020 DASDYO010000000
VERSION     DASDYO010000020.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 27658)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27658)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27658
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.020"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..295)
                     /locus_tag="U0290_000780"
     CDS             complement(<1..295)
                     /locus_tag="U0290_000780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose phosphorylase"
                     /protein_id="HEM2300828.1"
                     /translation="MQIKNKAMLITYSDSLGKNMEELSKVMETYFEDAVGGIHLLPFF
                     PSTGDRGFAPSDYTTVDSDLGSWEIIEKLGEKYYLMFDFMINHISRESLFFQDF"
     gene            complement(296..1993)
                     /locus_tag="U0290_000781"
     CDS             complement(296..1993)
                     /locus_tag="U0290_000781"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003770147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HEM2300829.1"
                     /translation="MEITETKEWWKESVVYQIYPRSFQDSNGDGIGDIRGIIERLPYL
                     KDLGINVIWLCPVYKSPMDDGGYDISDYYEIDPMFGTMSDMDELIEKAEKLGIKILMD
                     LVVNHTSDEHEWFEKAIADPKSKYRDYYIFREGVNGNPPNNWRSYFGGSAWEAVPGEE
                     NMFYLHAFSKKQPDLNWENIVVRNECIQMINWWLEKGLGGFRIDAILNLKKRIEYGTF
                     PADGEDGLVFIGHWILNQPGIEEWLKEIDERTFKKHNAFTVAEADVPEERLSEFIGEN
                     GHFRMVFDFSYTDIDTPETGEWFKNSEWTVKELKEKIITNELVTQRNGWGAKYLENHD
                     QPRSINKYLPQEYQDDRSKKMLGTLFMMLHGTPFIYQGQEIGMSNTRMESIDDYNDIA
                     THDQYHRAILSGMSPEEALEGMYRRSRDNSRTPMQWNNQKNAGFSDSDEIWLKANPNY
                     LDINVEQEQIDDNSVLNFYKKLIHLRSDSSKYKEVAVYGELLPVESSDEVIAYKRKTD
                     DAELLIIVNFSDSENQLCIEGTYEQVLANVALPEMVENVLEIPAYTGAVFSRVLEVD"
     gene            complement(2008..2838)
                     /locus_tag="U0290_000782"
     CDS             complement(2008..2838)
                     /locus_tag="U0290_000782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2300830.1"
                     /translation="MKRATVWPNLLLIVLGCIWIFPIIWIVLTAFRAESGQFVSYIFP
                     KEYTLDHFAYLFENHENFPFMLWVKNTMIVAVCSCLLSTFITVSMAYVLSRLRFRFKK
                     TMLKTALVLNMFPAFMSMIAVYYILKAFGLTQSLTALVLIYSSTAALTFYIAKGFFDT
                     IPKSLDESAMMDGATKLSIFTKITLPMSKPIIVYTALMAFMLPWMDFIFAKVIMGDNV
                     PKYTVSIGLYSMLNQTTANTMYTTFAAGCILIAVPITILFIYLQKYYVEGITSGAVKG
                     "
     gene            complement(2840..4177)
                     /locus_tag="U0290_000783"
     CDS             complement(2840..4177)
                     /locus_tag="U0290_000783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2300831.1"
                     /translation="MMVKKNYFNIFKNGSVSTRLSYVIMGAGNLAHKQIAKGLLFLFS
                     ELAFLFFLVFYGITLIQGMATLGTVNQSWNFDKSLGIMVRTPGDNSMLMLIYGIMTVV
                     ICVLFLFLYLANIRSACQVEGFQRENKKIPTFKEDLKSLLDNKFHVTLLTIPMIGVVV
                     FTIMPLVYMISLAFTNYDHEHLPPRNLFGWVGFVNFKNVLNGDISSTFFPVLGWTLIW
                     ALLATATCFFFGVLLALLINHKGVKFKKFWRTIFVITMAVPPFVSLLVMQNLLHAAGP
                     LNTMLLNWGIIAEPIPFLTDALLAKVSVIFVNMWIGIPVTMLIATGILMNLPKDQLEA
                     ARMDGGNSFHLFRYITFPQILTVMLPSLIQQFIGNINNFNVIYLLTGGGPSNSNFYGA
                     GDTDLLVTWLYKLTVEAADYNLASVIGIVTFILSAAFSLFAYTRTNSYKEGSN"
     gene            complement(4195..5421)
                     /locus_tag="U0290_000784"
     CDS             complement(4195..5421)
                     /locus_tag="U0290_000784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM2300832.1"
                     /translation="MKKLLLSISIIVGLSLLASCGVEKEYKPDIKVNEKNVSLKVWVD
                     LNQGDFYRKVVDDFKKEHPDKNYDITVIESESGRAQEYVQKDPEAAADVFITPNDRLG
                     QLVESGAVYQLTKYTDDIKKNNTPTSIQAATYQDKMYGFPVTAEAMFMYYDKRVFSED
                     DIKTFSGITSKGKLGINLAEAGADYRETPWFIANGTYLYGENGEDPYGTTFNTPEGVQ
                     VLNWIGELKNNPNVVAVNADEISALRSGKINAVFSGVWNKDAIREVLGENMGVAVYPK
                     ADFGSGQVDMMAFQGSGIYCVNAFTKSPLDAMELADYITNADVQEKAFKELGKIPSNL
                     EARTSSTVEKDDVAKAVIDMTSGKHSVLMPKIPEMNVFWQHMNPLLVDTYKGKIKKED
                     YPEALDKLVKDITPAK"
     gene            complement(5559..6554)
                     /locus_tag="U0290_000785"
     CDS             complement(5559..6554)
                     /locus_tag="U0290_000785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724186.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2300833.1"
                     /translation="MNKVTKIGDVAEKTGYSITTISRAINGNPNVSDKTKKKIFAAMK
                     ELNYYPNNIAQQFRGQGTKMIGVVISFITNPFFAYLVDAIERYLSHRGYQVVMLQTLE
                     NPAKELQFIEMLQKKQLDGLIMANLENDTEEIKSLVESGKIVLCNRYLGNENLTIINI
                     DETKAAYQATNYLIKCGYKRLAYCTGGIKNKNDYRFKGFMQAVTENGLSFDESLYFEK
                     LLTIKDGEELLVNILEEKSTLPDAIFSNGDTVAAGILYAAKKYGIAVPEELGIIGFDN
                     QPIAEVLNPALTTIEQPIKELGEYSAQVLLANLQGTSVPVAPDLETKLIIRETTK"
     gene            complement(6699..7877)
                     /locus_tag="U0290_000786"
     CDS             complement(6699..7877)
                     /locus_tag="U0290_000786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-splicing ligase RtcB"
                     /protein_id="HEM2300834.1"
                     /translation="MLTLKGKYNEAKVFTDNVDDNTIGQIITLCNQPFAKGSKIRIMP
                     DTHGGKGCVIGTTMTIQDKIVPNLVGVDIGCGLYVVKLKPGKLKMDFDKLDKVIRERV
                     PSGSKTHDKPVDEFDLEGIVAPIHRGWVARSIGTLGGGNHFIEVNQGSDGIYLVIHSG
                     SRVLGKEIAEYHQEVAYKRLDILRKELKLDATAAKKRGNLEMANNLNGEREQVKLDYD
                     LSYVTGSDLNNYLNDMEIAQKFAARNRYVMAETILKAMKWDKIVVSAFDCVHNYIDID
                     NHMLRKGATSAQLGEQIIVPLNMRDGSILATGKGNADWNYSAPHGAGRMLSRSKAKAQ
                     ISLESYQAAMKDVWTTSVSKKTIDEAPKAYKSAKQLLVDVEDTMEIQEIIKPLYNFKA
                     "
     gene            complement(8225..8830)
                     /locus_tag="U0290_000787"
     CDS             complement(8225..8830)
                     /locus_tag="U0290_000787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2300835.1"
                     /translation="MTNNHYYTNDETIKHNRKTWQVMLKGFNMSFTSDNGVFSKNTVD
                     FGSRLLIESFELETKIGKILDVGCGYGPMGLTVAKAFPDSQIEMVDVNLRALELAKEN
                     AEINKITNTHIYESSVYDSVTANDYQAIISNPPIRAGKRIVHAILEGAYDHLQETGEL
                     WIVIQKKQGGPSAEKKMEEVFGNVETVAKDKGYFIFKSVKN"
     gene            complement(8973..9335)
                     /gene="rplL"
                     /locus_tag="U0290_000788"
     CDS             complement(8973..9335)
                     /gene="rplL"
                     /locus_tag="U0290_000788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L7/L12"
                     /protein_id="HEM2300836.1"
                     /translation="MALNIEEIIASVKEASVLELNDLVKAIEEEFGVTAAAPVAVAAA
                     GGAAAEQTEFTVELASAGDSKIKVIKVVREITGLGLKEAKELVDNAPKALKEGVAKEE
                     AEEIKAKLEEVGANVEVK"
     gene            complement(9414..9914)
                     /locus_tag="U0290_000789"
     CDS             complement(9414..9914)
                     /locus_tag="U0290_000789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L10"
                     /protein_id="HEM2300837.1"
                     /translation="MSKVLEAKQSAVEEIKTKLSASASTVIVDYRGLNVGEITELRKQ
                     LRDAGIEFKVYKNSLTRRAVEANGYEGLEGALTGPNAIAFSNEDVVAPAKILNDFAKD
                     HEALEIKAGVIEGKVASLEEIKALATLPSREGLLSMLCNVLQAPVRGLAIATKAVADQ
                     KEGQEA"
     misc_feature    complement(9970..10113)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00557"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L10 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00557"
     gene            complement(10162..10851)
                     /gene="rplA"
                     /locus_tag="U0290_000790"
     CDS             complement(10162..10851)
                     /gene="rplA"
                     /locus_tag="U0290_000790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L1"
                     /protein_id="HEM2300838.1"
                     /translation="MAKKGKKYQDALKQIDANKVYTAEEAVELAKKIDFAKFDATVEV
                     AFRLGVDPKKADQQIRGAVVLPNGTGKTQRVLVFAKGEKAKEAEAAGADYVGESEFVE
                     KINQGWFEFDVIVATPDMMGEVGKLGRVLGPKGLMPNPKTGTVTMDVTKAVNEIKAGK
                     VEYRVDKAGNVHAAIGKVSFDAAKLVENFRTVNDVLQKAKPAAAKGTYVKNLSVTTTF
                     GPGIKVDPASL"
     gene            complement(10891..11316)
                     /gene="rplK"
                     /locus_tag="U0290_000791"
     CDS             complement(10891..11316)
                     /gene="rplK"
                     /locus_tag="U0290_000791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11"
                     /protein_id="HEM2300839.1"
                     /translation="MAKKVIKEVKLQIPAGKANPAPPVGPALGQAGVNIMGFCKEFNA
                     RTADQAGLIIPVVITVFEDRSFTFITKTPPAAVLLKKAAKVEKGSGEPNKTKVASVTR
                     AQVQEIAETKMPDLNAANVESAMLMVEGTARSMGITIQD"
     gene            complement(11443..11913)
                     /locus_tag="U0290_000792"
     CDS             complement(11443..11913)
                     /locus_tag="U0290_000792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 63 family protein"
                     /protein_id="HEM2300840.1"
                     /translation="MDKAKQIYLEFKREADFLELDFPLFLGDGPGFGELCMDYSEQDG
                     YMLYGYERGKRNSEFKTTDFDEFKYEVFLHICWYMGMEFELRHRKEDMRHDDNILEAD
                     TRKIAFEKTLQLLKKVNPAWIDKAAQGYTAYLNLWRENKNVYFDKEAMEFKVNS"
     gene            complement(11968..12501)
                     /gene="nusG"
                     /locus_tag="U0290_000793"
     CDS             complement(11968..12501)
                     /gene="nusG"
                     /locus_tag="U0290_000793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusG"
                     /protein_id="HEM2300841.1"
                     /translation="MEKNWYVVHTYSGYENKVKANLEKRVESMGMSDKIFRVIVPEEE
                     ETEVKNGKTKTIKRKVFPGYVLVEIVMTDDSWYVVRNTPGVTGFVGSAGSGSKPTPLL
                     PEEADRILKSMGMVEKRAEADFEIGETVMVKEGPFADFSGKVDEMDNDKGKAKVMVNM
                     FGRETPVEVDFNQIEKL"
     gene            complement(12631..12810)
                     /gene="secE"
                     /locus_tag="U0290_000794"
     CDS             complement(12631..12810)
                     /gene="secE"
                     /locus_tag="U0290_000794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecE"
                     /protein_id="HEM2300842.1"
                     /translation="MSAIARFFRNVSSEMHKVTWPTRKELLTYTVTVVITVVLFALFF
                     MLIDFGIEQIIKLIV"
     gene            complement(12830..12979)
                     /gene="rpmG"
                     /locus_tag="U0290_000795"
     CDS             complement(12830..12979)
                     /gene="rpmG"
                     /locus_tag="U0290_000795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L33"
                     /protein_id="HEM2300843.1"
                     /translation="MKKKTSLACSECGSRNYTVNVSGTQKETRLEVKKFCRHCNKHIL
                     HRETK"
     gene            complement(13083..13688)
                     /locus_tag="U0290_000796"
     CDS             complement(13083..13688)
                     /locus_tag="U0290_000796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sporulation sigma factor SigH"
                     /protein_id="HEM2300844.1"
                     /translation="MDNSVNQEELAMLELARSGDTEALEYFFSKYQSVIYWKSTQYFL
                     QGAERDDLIQEAMIGLFKAIRDYDKTKEASFRSFAEMCINRQLLSAVKRASRQKNIPL
                     NNSVSLDTPIAEDDMDWTLLDVISEKAAETPEDFLIKNEDLTHVARQLEQVTSEFEKE
                     VLKQYLEGKSYQEMALFFNKKEKAIDNALQRVKKKMMKQLE"
     gene            complement(13769..14281)
                     /locus_tag="U0290_000797"
     CDS             complement(13769..14281)
                     /locus_tag="U0290_000797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NYN domain-containing protein"
                     /protein_id="HEM2300845.1"
                     /translation="MEQILLVDGYNVIGAWPELSFLKDRDLEAARDKLVEWMAEYQSY
                     TGYRVVVVFDAQFVRGVKRKSKKYQVEVVFTHEDETADEYIEQKAIEWKNVRTQIMVA
                     TSDYTEQWAIFGQGALRISSRELLFEIQEMSKQIGQKIKRIQEEMPKSNLNLDSDVIS
                     QLEKWRRGEE"
     gene            complement(14284..15039)
                     /gene="rlmB"
                     /locus_tag="U0290_000798"
     CDS             complement(14284..15039)
                     /gene="rlmB"
                     /locus_tag="U0290_000798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (guanosine(2251)-2'-O)-methyltransferase RlmB"
                     /protein_id="HEM2300846.1"
                     /translation="MEQENEQEWIGGRNPVLEVLRSDRDIHKIYVQEGSQKGVLKQVL
                     TLAKERKIQVQFVPKQKIEKVVGGAHQGVAAQVAAYQYAELDDLFAAAEAKDEMPFFI
                     ILDELEDPHNLGSIMRTADSVGAHGIIIPKRRSVGLTQTVAKASTGAMEYVPVVRVTN
                     MVRTMEELQKRGLWIFGTDAKGSSDYRTMDVDMPLAIVIGSEGFGMSRLVREKCDFLV
                     HLPMRGKVTSLNASVAASLLLYEVYRKRFPLEK"
     gene            complement(15039..15449)
                     /locus_tag="U0290_000799"
     CDS             complement(15039..15449)
                     /locus_tag="U0290_000799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mini-ribonuclease 3"
                     /protein_id="HEM2300847.1"
                     /translation="MAEVKEYKQLNGLALAYMGDAVYEKFIREYLLAAGKTKPNQLHK
                     TATKFVSAKGQAVALKAMIAEGFLTEEEDRIAKRGRNAKSYTVPKNTDPGTYSMSTSF
                     EAVLGYLYLAGELDRLQEWMEKALEIVEKGVETN"
     gene            complement(15453..16868)
                     /locus_tag="U0290_000800"
     CDS             complement(15453..16868)
                     /locus_tag="U0290_000800"
                     /EC_number="6.1.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine--tRNA ligase"
                     /protein_id="HEM2300848.1"
                     /translation="MSIQIFNTLKREKEPFKPLKDGEVKMYVCGPTVYNYIHIGNARP
                     IIVFDTVRRYFTYRGYDVKFVSNFTDVDDKLIRAANELKLTVPEVADRFIGAYFDDVD
                     QLNVAKATVNPRVTENMDEIIQLISTLIEKGYAYESAGDVYFRTKKFKDYGKLSGQEL
                     SELQHGARVEYNERKQDELDFTLWKAAKPGEIFWESPFGNGRPGWHIECSALAKKYLG
                     DTIDIHAGGQDLVFPHHEDEIAQSEAATGKTFANYWMHNAFLNIDGEKMSKSLGNFIT
                     LHDVLKDNDPNVIRFFMLSVHYRKPITLNDAILEDAKNGLERLMIAYQNIDHRIQTDD
                     GEYVEEAHEDEWLEQLTELKQAFEDDMDDDFNTANAITTFHELAKRANIYLAKETVSI
                     NVLREFLSMMRLFAEVLGLKLENTQTDSLDDSEVEALIEERLQARNERNFARADEIRD
                     ILKEKNIILEDTAQGTRFRRG"
     gene            complement(16875..17489)
                     /gene="cysE"
                     /locus_tag="U0290_000801"
     CDS             complement(16875..17489)
                     /gene="cysE"
                     /locus_tag="U0290_000801"
                     /EC_number="2.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine O-acetyltransferase"
                     /protein_id="HEM2300849.1"
                     /translation="MPTRLKEDIATIIKNDPATKSFFDAFLTNPGLHALWWHRVANFF
                     YRHKMVLFGKVLSQNARFWTNIEIHPGATIGRRLFIDHGAGIVIGETAEIGDDVTIFH
                     GVTLGGTGKDCGKRHPTVGDGALVSAGAKVLGPVEIGAGARIGAGAVVLKDVPPGATV
                     VGIPAKVVRLNGRTVGHAVPKMDELTLRIAELENIVEKLLKEKE"
     gene            complement(17889..19364)
                     /locus_tag="U0290_000802"
     CDS             complement(17889..19364)
                     /locus_tag="U0290_000802"
                     /EC_number="6.1.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate--tRNA ligase"
                     /protein_id="HEM2300850.1"
                     /translation="MSETKRVRVRYAPSPTGFLHIGNARTALFNYLFARHNDGDFIIR
                     IEDTDAKRNIADGEESQMTNLKWLGMDWDEGVDVPGKYGPYRQSERQSIYEPLIQQLL
                     DEGLAYKCYCTEEELDAEREKQKANGEMPRYSGKCRHLTKEQQAEKEAQGFKPSIRFK
                     VPANETITFNDMVKDDVSFESNGIGDFVIAKKDGIPTYNFAVAVDDHLMEISHVLRGD
                     DHISNTPKQILIYNAFGWEPPIFGHMTLIVNESRRKLSKRDGSIIQFIEQYRDLGYLP
                     EALFNFIAMLGWSPEGEEEIFSKEEFIKMFDPKRLSKSPALFDNVKLTWVNNQYVKKL
                     PLNDVVELSLPHLQKAGVVSAELDQAELDWVHKLVSLYHEQMSYGAEIVPLSEMFFAD
                     AESITFDEEETAVLAEETVPTVISAFKKELEALEVLEAAEVKAAIKRVQKETGVKGKG
                     LFMPIRIVTTGEMHGPELPLAIEVLGREKVLNRLDTWLKNN"
     gene            complement(19383..19856)
                     /locus_tag="U0290_000803"
     CDS             complement(19383..19856)
                     /locus_tag="U0290_000803"
                     /EC_number="4.6.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 2,4-cyclodiphosphate
                     synthase"
                     /protein_id="HEM2300851.1"
                     /translation="MIRIGQGYDVHKLAYDRELIVGGIKIPYEKGLLGHSDADVLLHA
                     ITDAIIGAIGAGDIGHFFPDTDMAFKDADSAELLAEIWQKVEADGFRLGNLDATIIAE
                     KPKMAPYVEQMKLRIAELLHADSAQVNVKATTTEKLGFTGREEGIASLAVVLLEK"
     gene            complement(19849..20547)
                     /gene="ispD"
                     /locus_tag="U0290_000804"
     CDS             complement(19849..20547)
                     /gene="ispD"
                     /locus_tag="U0290_000804"
                     /EC_number="2.7.7.60"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEM2300852.1"
                     /translation="MNYELVFLAAGQGKRMNAQKNKMWLELVGEPIFIHALRPFLADN
                     RCSKVIVVSQEEERKHVKELMSQLNVAESRIEIVKGGSERQYSVAAGLERCGTERVVL
                     VHDGARPFITLDIIDRLLIGVEQSKAAICAVKVKDTVKRVVKGVVQETVDRENLWQVQ
                     TPQAFELPILRKAHQLARKEQFLGTDEASLVERLPCPVAIVQGSYYNIKLTTPEDMPL
                     AKAILGELGGIAND"
     gene            complement(20567..21640)
                     /locus_tag="U0290_000805"
     CDS             complement(20567..21640)
                     /locus_tag="U0290_000805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PIN/TRAM domain-containing protein"
                     /protein_id="HEM2300853.1"
                     /translation="MLTWVIRVCFLILGGTTGVFSLPALWVKLGIGHILLINNPYTDA
                     LIGALIFYLITFWAVKYVEAALNWLEEKLAKIAIATLVYGGLGLFVGLVIAFFASNAL
                     SQTNIPLLNSVVPVILTLVLGYLGFRIGISRRNEFGNFVNNRNAKKRTPEEEKTEEKS
                     KKTYKILDTSVIIDGRIADILTTGFLDGTVVIPLFVLAELQHIADSSDTLKRTRGRRG
                     LDILNRIQKEEAIQVEMYEGDFEDTPEVDSKLVKLAKVMGGIVVTNDYNLNKVCEFQN
                     VPVLNINDLANAVKPVVLPGEKMTVLMVKDGKEHNQGVAYLDDGTMIVVEDGRKFINE
                     TIQVEVTSVLQTSAGRMIFAKPS"
     gene            complement(21773..23146)
                     /gene="radA"
                     /locus_tag="U0290_000806"
     CDS             complement(21773..23146)
                     /gene="radA"
                     /locus_tag="U0290_000806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadA"
                     /protein_id="HEM2300854.1"
                     /translation="MAKAKRTTKFVCQACGYESAKWMGKCPNCNEWNQMVEALEPSKK
                     SRSAFNHTGEPSKATPITQIASETEKRVETNMPELNRVLGGGVVPGSMVLVGGDPGIG
                     KSTLLLQVSAQLTLTNKKVLYISGEESIKQTKLRAERLQVSGDNLYVYAETNLEAVQE
                     TIDFVKPDFVVIDSIQTVYHPDVTSAAGSVSQVRECTATLMRIAKMQNIAIFIVGHVT
                     KEGAIAGPRLLEHMVDTVLYFEGERHHAYRILRAVKNRFGSTNEMGIFEMRDVGLVEV
                     ANPSEVFLEERLEGASGSTVVASMEGTRPVLVEIQALVSPTMFGNAKRMATGIDYNKV
                     SLIMAVLEKRVGLMLQNQDAYLKAAGGVKLDEPAVDLAVAVSVASSYRDKPTRSTDCF
                     IGELGLTGEIRRVARIEQRVQEAAKLGFKRIFIPKNNEGNWKIPKDVQVVGVETIGEA
                     LKKALPD"
     gene            complement(23293..25755)
                     /locus_tag="U0290_000807"
     CDS             complement(23293..25755)
                     /locus_tag="U0290_000807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp protease ATP-binding subunit"
                     /protein_id="HEM2300855.1"
                     /translation="MMFGRFTQRAQKVLALSQEEAMRLNHSNLGTEHILLGLVREGEG
                     IAAKALYELGISSEKVQQEVEGLIGHGEKAVTTIQYTPRAKKVIELSMDEARKLGHTY
                     VGTEHILLGLIREGEGVAARVLSNLGISLNKARQQVLQLLGGGDATGAGRQTNTQATP
                     TLDSLARDLTVIAREDNLDPVIGRSKEIQRVIEVLSRRTKNNPVLIGEPGVGKTAIAE
                     GLAQQIVRNEVPETLRGKRVMTLDMGTVVAGTKYRGEFEDRLKKVMDEIRQAGNVILF
                     IDELHTLIGAGGAEGAIDASNILKPPLARGELQCIGATTLDEYRKYIEKDAALERRFQ
                     PIKVDEPTVEESIQILHGLRDRYEAHHRVAITDEALEAAVRLSDRYISDRFLPDKAID
                     VIDESGSKVRLKSFTTPKNVKEMENNLSDLKKEKDAAVQGQEFEKAASLRDKEQKLKK
                     SLEETKANWQEKQGLDHSEVTEEIVAEVVASWTGIPVAKLAETETNKLLNMEKLLHER
                     VIGQDAAVKAVSLAVRRARAGLKDPKRPIGSFIFLGPTGVGKTELARALAESMFGDED
                     SMIRIDMSEYMEKFSTARLVGAPPGYVGYEEGGQLTEKVRQKPYSVVLLDEIEKAHPD
                     VFNMLLQVLDDGRLTDSKGRVVDFRNTVIIMTSNIGAQEMKQDKSMGFNVIDPLKDHK
                     AMEHRVLQDLKQAFRPEFINRIDETIVFHSLQEKELKQIVTLLTAQLTKRLAERDIHV
                     KLTEGAKSKIAKDGYDPEYGARPLKRAIQKEVEDMLSEELLRGNIKVGDYVEIGVKDG
                     KLEVRKKDAPKKKTTAKKVKTK"
     gene            complement(25784..26806)
                     /locus_tag="U0290_000808"
     CDS             complement(25784..26806)
                     /locus_tag="U0290_000808"
                     /EC_number="2.7.14.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein arginine kinase"
                     /protein_id="HEM2300856.1"
                     /translation="MNVFEPRLSSWLENAGDDDDVVLSSRIRLARNLKDEQFPVYEQK
                     EEIVDNIAEVFDDNFTLIKMNQISLLQKALLVEKHLISPYMMNKSEYGAVLLNEEENV
                     SIMLNEEDHLRIQCMTPGLRLFDALEAALQIDGYVEEKLSYAFDKEFGYLTSCVTNIG
                     TGMRASVMVHLPGLVTTKRIKSVIEAIRSLGFVVRGIYGEGSMPASNIFQVSNQVTLG
                     KTETEIVEDLTQVMEQIIMQERVARTTLKQKFHIALEDRVFRSYGLLMNCRIISMKEA
                     SDAISDIRLGVELGFFEHISRQKMNELVLFSQPAFLRREAGRDMDELEEKVIRAKVIR
                     EILGDK"
     gene            complement(26803..27321)
                     /locus_tag="U0290_000809"
     CDS             complement(26803..27321)
                     /locus_tag="U0290_000809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UvrB/UvrC motif-containing protein"
                     /protein_id="HEM2300857.1"
                     /translation="MICQRCGENKAVIALQQLNELGKVESLYLCENCATDEALSSEKD
                     LVKAMDTFSEVALDFLTLLQKEENAQKEIVCENCQLSFEEFLKTNRVGCPECYSAFEA
                     QLVPIIGRVQNGYKKHVGKVPAEVERAEGVQNEISRLQEKLAQLVENEEFEEAAVVRD
                     EIKALKAGGEDK"
     gene            complement(27334..>27658)
                     /locus_tag="U0290_000810"
     CDS             complement(27334..>27658)
                     /locus_tag="U0290_000810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="CtsR family transcriptional regulator"
                     /protein_id="HEM2300858.1"
                     /translation="TRFTMERGYIVESKRGGGGYIRIIKVKMNDKLQLLEAIISMVHD
                     KKVSQSFSEDVILRLLEEEVITKKEARLMVAALDREVLILPLPDRDILRSRILEAMLV
                     ALKYD"
BASE COUNT         7992 a         6468 c         4166 g         9032 t
ORIGIN      
        1 taaaatcttg aaagaagagt gattcgcgag aaatgtgatt aatcataaaa tcaaacatta
       61 aataatactt ttcgcctaat ttctcgatta tttcccaaga acctaggtcg ctatctactg
      121 ttgtgtaatc acttggcgca aaccctcgat ctccagtgga tggaaagaac ggcaataagt
      181 gaatcccgcc aacagcatct tcaaaataag tttccatcac cttggataat tcttccatat
      241 ttttccctaa actatcagaa taagtaatta acatagcttt atttttaatt tgcaatcagt
      301 ctacctccaa aacccttgag aagacggcac ctgtatatgc aggtatttca aggacatttt
      361 ctaccatttc tggcaacgct acattagcaa gtacctgttc ataagtacct tcaatgcata
      421 attgattttc agaatcagaa aaattcacga tgattaagag ctcagcgtca tctgttttac
      481 gtttgtaagc aataacttca tcacttgatt ctactggcag taattctcca taaacagcca
      541 cttctttata tttactagaa tcacttctta aatggattaa tttcttataa aaattcaata
      601 cggaattatc atcgatttgt tcctgctcta cgttaatatc aaggtaatta gggtttgctt
      661 tcaaccaaat ttcatctgag tcggaaaaac cagcgttctt ttgattattc cattgcatcg
      721 gtgttcttga attatcccta ctacgccgat acattccttc aagcgcttct tccggactca
      781 ttccagagag aattgcgcga tggtattgat cgtgcgtcgc aatatcgtta taatcatcta
      841 tactttccat ccgagtatta ctcataccaa tctcttgtcc ttgataaatg aacggcgtac
      901 cgtgcaacat cataaataac gtgcctagca tttttttgct acgatcatct tggtattctt
      961 gaggtaaata cttatttatc gaacgcggtt gatcatgatt ttctaagtat tttgcccccc
     1021 aaccatttcg ctgtgtcacc agttcattgg taattatttt ctcttttaat tcttttactg
     1081 tccattctga attcttgaac cattcgcctg tttcaggagt atcaatatct gtatagctaa
     1141 aatcaaacac catacggaaa tgaccatttt cacctataaa ttcagaaagt ctttcttcag
     1201 gcacatccgc ctcagccaca gtaaatgcat tatgtttttt aaatgtccgt tcgtcaatct
     1261 ccttgagcca ctcttcaatt cccggctgat ttaaaatcca atgaccgatg aaaaccaagc
     1321 catcttcccc gtccgctggg aaagtaccgt actcaattct tttcttcaaa tttaaaatgg
     1381 catcaattct aaagccacct aaaccttttt caagccacca gttaatcatt tggatacatt
     1441 cattacgcac tacaatgttt tcccagttta aatctggctg ttttttagaa aaagcatgta
     1501 ggtaaaacat gttttcctca cctggtacgg cttcccacgc agatccccca aaataagaac
     1561 gccaattatt aggcgggttt ccatttacac cctctcggaa aatataataa tctcgatatt
     1621 tactttttgg gtcagctatt gctttttcaa accattcatg ttcatcagat gtatggttta
     1681 ccaccaaatc catcaatatt tttattccta atttttctgc cttctcaatt aattcatcca
     1741 tatcactcat cgttccaaac attggatcaa tctcatagta atcagaaatg tcataaccac
     1801 catcatccat aggtgattta tagacaggac aaagccaaat cacattaata cctaaatctt
     1861 tcaaataagg aagtcgttct ataattcctc taatatctcc aataccatcc ccatttgaat
     1921 cttgaaaact acgcggatag atttggtaca ctaccgattc tttccaccat tctttcgttt
     1981 ctgttatttc cactattaat ctatctccta tcctttaaca gcaccacttg taatgccttc
     2041 aacataatat ttttgcaaat aaataaacag tattgtaatt ggtaccgcaa tcaatataca
     2101 gccagccgca aacgttgtat acattgtatt tgccgttgtt tgattcaaca tggaatataa
     2161 acctatcgac actgtatatt taggcacatt gtctcccata atcactttag caaaaataaa
     2221 atccatccaa ggcaacataa atgccattaa agctgtgtat acaataatag gcttagacat
     2281 tggtaaagtt atttttgtaa agatacttaa tttcgtcgcc ccgtccatca ttgccgattc
     2341 gtccaaagat tttggtattg tatcaaaaaa tccttttgca atataaaaag ttaatgcagc
     2401 tgtagatgaa taaattaaca caagcgccgt tagagattgc gttaatccaa atgctttcaa
     2461 aatatagtaa actgctatca tgctcataaa agcaggaaac atatttaaaa ctagcgctgt
     2521 ttttaacatc gtctttttaa atctaaagcg aagtctagat aacacataag ccatcgaaac
     2581 ggttataaaa gtgctcaata aacaggaaca caccgcaaca atcattgtat ttttaaccca
     2641 taacataaaa ggaaaatttt catgattttc aaataggtac gcaaaatgat ctagcgtata
     2701 ttctttcgga aagatatacg aaacaaattg tccactttcc gctctaaaag ctgtcaaaac
     2761 aatccagata atcgggaata tccagataca cccgagcact atcaacaata gattaggcca
     2821 tactgtagct cttttcattt cagttgctcc cttctttata agaatttgta cgtgtgtagg
     2881 caaataacga gaatgccgcg ctaagaatga atgttacaat cccaataacc gaagctaaat
     2941 tataatccgc agcttctact gttaatttat aaagccatgt cacgagcaaa tccgtatccc
     3001 cagcaccata gaagttacta ttcgaaggtc ctccaccagt caagagatag atcacattaa
     3061 agttatttat atttccaata aattgttgaa tcagacttgg caacatcacc gttaagattt
     3121 gagggaaagt tatgtatcta aataaatgaa aactgttacc tccatccatt cgcgccgctt
     3181 ccaattgatc tttcggtaga ttcattaaaa tccccgtggc gattaacata gttaccggaa
     3241 tcccaatcca catattgaca aatatgacgg atacctttgc tagcaaagca tctgtcaaaa
     3301 atggtatcgg ctcagctata attccccaat taagtaacat cgtattaagc ggtcctgctg
     3361 catgcaacaa gttctgcatt acgagaagtg acacaaacgg aggtaccgcc atagttataa
     3421 caaagatagt gcgccaaaac tttttgaatt taacaccctt atgattaata agaagtgcaa
     3481 gcaatacgcc aaaaaagaaa caagtagcag tagctaaaag cgcccaaata agtgtccatc
     3541 caagcaccgg aaagaacgta ctggaaatat caccatttag cacattttta aagttaacaa
     3601 atcctaccca tccaaataaa ttccttggcg gtaaatgttc atgatcataa ttggtaaaag
     3661 ccaaagaaat catataaaca agtggcatta tcgtaaacac cacaacccca atcatcggga
     3721 tcgtcagtaa agttacatga aatttattgt ctagcaaact ctttaagtct tccttaaatg
     3781 ttgggatttt tttattttcc cgctggaagc cctccacctg gcaagcgctt ctaatattag
     3841 caaggtacaa gaagagaaat agtacacaaa taacaactgt cataatccca tatattagca
     3901 tcagcatgga attatcgccc ggtgttcgaa ccataatacc taaactctta tcaaaattcc
     3961 acgattggtt aactgtccct aatgtcgcca taccttgaat taaggtaatg ccataaaaca
     4021 caaggaaaaa caagaaagca agttcactaa aaagaaatag aagtcccttc gcaatttgct
     4081 tatgggccaa attaccagcc cccataatta cataagataa tctcgtagaa acagaaccat
     4141 tcttaaaaat attaaaataa ttcttcttaa ccatcatata cttaacctac tttcctattt
     4201 cgctggtgta atatctttga ctaatttatc gagcgcctct ggataatctt ctttcttaat
     4261 cttgccttta taagtatcta ctaatagcgg gttcatatgt tgccaaaaaa cgttcatttc
     4321 aggtattttc ggcattaaaa cggagtgctt tccggatgtc atatcaataa ctgctttcgc
     4381 cacatcgtcc ttttctactg tagaactagt tcgtgcctct aaattgctcg gaattttccc
     4441 taactcttta aaagcttttt cctgcacatc cgcattagta atataatcag ctagttccat
     4501 cgcatctaat ggcgatttag taaatgcgtt cacacagtat atcccgcttc cttggaaagc
     4561 catcatatct acctgaccac ttccaaaatc ggccttcgga tatactgcca ctcccatatt
     4621 ttcacctaaa acttctcgta tcgcatcttt attccaaacc ccactaaaaa cggcatttat
     4681 tttaccggat ctaagcgcac taatctcatc tgcatttaca gcgacaacat taggattatt
     4741 tttcagctca ccaatccagt tcaatacttg gacgccttct ggagtgttaa aggttgtccc
     4801 ataaggatct tcgccgttct caccataaag atatgtacca tttgcaataa accaaggtgt
     4861 ttcacgataa tccgcgccag cttccgcaag atttattccg agcttccctt tagacgttat
     4921 tccagaaaaa gttttaatat catcctctga aaaaacgcgc ttatcataat acataaacat
     4981 cgcttccgcc gtcacaggga aaccatacat tttatcttga tatgtagcag cttgaatgga
     5041 ggttggtgta ttatttttct taatatcatc tgtatacttt gtcaattggt aaaccgcacc
     5101 agactctacc agttgtccta gacggtcatt cggagttata aatacatccg ccgcagcttc
     5161 tggatctttc tgaacatatt cttgtgctcg cccagattca gattcaataa ccgtaatatc
     5221 ataattttta tcaggatgtt cttttttaaa atcatctacc actttcctat aaaaatcacc
     5281 ctgatttaaa tccacccaaa cttttaaaga aacatttttc tcgtttactt ttatatctgg
     5341 cttgtattcc ttttctacac cacaactagc caacaaactt aaaccgacaa taatactgat
     5401 ggacaaaagt aacttcttca tacttgaaca ttctccttat cttcacttaa aatgacaacc
     5461 ggttgtcatt ttagcttaag cggtttcata tatcgtaaaa ataatatcaa ttatcttata
     5521 aaatgtcaac cgttttcata aaaataataa gagagaattt acttggtagt ctctcttatt
     5581 attagttttg tttcaaggtc tggcgctacc ggcacactcg ttccttgtaa attagccaat
     5641 agaacttgcg ccgaatattc accaagttct ttaattggtt gttcaatagt tgtcaacgcc
     5701 ggattcagaa cttccgctat aggttgatta tcaaaaccta tgattcctag ctcctctggc
     5761 actgctatcc cgtatttttt tgcagcatat aatatcccag cagcaaccgt atcaccattt
     5821 gaaaaaattg cgtccggcag agtagatttc tcttctaaaa tattaactag aagctcttcg
     5881 ccatctttaa tggttaataa cttctcaaaa tacaatgatt catcaaaaga aagtccattt
     5941 tctgttacag cttgcatgaa tcctttaaaa cggtaatcat ttttattttt aataccacca
     6001 gtacagtagg caaggcgttt ataaccgcac tttattaaat aattcgttgc ttgataagcc
     6061 gctttcgttt catcaatgtt aataatcgtc aaattttcat ttcccagata acgattacaa
     6121 agaacaattt tgccactttc aacgagtgat ttaatttctt ctgtatcatt ttctaagtta
     6181 gccataatca atccatctag ctgtttcttt tgtaacatct cgataaattg taattctttt
     6241 gcaggatttt ctaaagtttg caacatgaca acctgatacc ctctgtgaga tagatagcgt
     6301 tcaatcgcat caacaaggta cgcaaaaaaa ggattggtta taaaggaaat cacaacacca
     6361 atcatcttag tcccctgccc tcgaaattgt tgagcaatat tattaggata ataattcagt
     6421 tctttcatcg cagcaaaaat tttctttttt gttttatctg aaacatttgg attaccatta
     6481 attgctcgag aaatagtagt tatagaatag cccgttttct ctgctacatc tccaattttc
     6541 gtcactttat tcatatctat ctccctaaaa tttcaaattc atctatttta atttattata
     6601 tcagattaca gaaaaagtga gaacttattt ccttataacg ctactctaac aacaaaaaga
     6661 agaagcagca aatagtaata tatgctgctt cttttccatc atgctttgaa attgtataac
     6721 ggtttaatta tttcttgaat ctccatcgta tcttctacat caacaagcaa ttgtttagct
     6781 gatttatagg cttttggagc ttcatcaatt gtttttttag aaacagaagt agtccaaacg
     6841 tctttcattg ctgcctgata gctttctaaa ctgatttgcg cttttgcttt agaacgactt
     6901 agcatccttc ccgccccgtg cggcgccgag taattccaat ctgcatttcc tttacccgtt
     6961 gcaagaatgc tgccatcgcg catattaagc ggaacgataa tttgctctcc aagctgagca
     7021 gatgtcgcac cttttctaag catgtggtta tcaatatcaa tgtaattatg cacacaatca
     7081 aacgctgaaa caactatttt atcccacttc atcgctttta aaatagtttc tgccatgacg
     7141 taacgattac gcgctgcaaa tttttgtgca atttccatgt catttaaata attgtttaaa
     7201 tcagagcccg tcacatagga taagtcataa tccaatttca cttgctcacg ctcaccgttc
     7261 aagttgttgg ccatttctaa attgccgcgt tttttcgcag cagttgcgtc taatttcaat
     7321 tctttacgca atatgtctaa tcttttataa gctacttctt ggtggtattc tgcaatttct
     7381 ttaccaagca cccgacttcc actatggatt acaaggtaaa taccatcaga accttgattc
     7441 acttcaataa aatggttccc gccaccaagc gtccctatac ttctagctac ccagccgcga
     7501 tgaattggcg caactatacc ttccaaatca aattcatcta caggcttatc gtgtgttttg
     7561 cttccagatg gcacccgttc gcgaataact ttatctagct tatcaaaatc catttttaac
     7621 ttgccaggtt ttagttttac tacgtacagt ccgcaaccga tgtccactcc aaccaaattc
     7681 ggtacaattt tatcttgaat tgtcattgtc gttccaatca cacagccttt accaccgtgc
     7741 gtgtcgggca tgatccgaat cttactaccc ttcgcaaacg gttgattaca cagcgtaata
     7801 atttgcccga tggtattgtc gtccacatta tctgtaaaaa ctttcgcttc gttatatttt
     7861 ccttttaatg ttagcatttc tattcctcat tttctgttta atagagaaat gaaagtctcc
     7921 acttctcttc ctagctgtta aaattctcca gttctcctat tgtcattcga ctcacttctt
     7981 tcaaatttat ttttaggtaa aaaaaaaagt ccctcaatca agaaagattg aaggacgtaa
     8041 cttttaacgg acgctacctt gaaaagacac cggttggcta tgcaggaacg ttaaagaaat
     8101 acctattatc ttctgtcttg attggttgtt tttttctagt atatttttca ttctaagcat
     8161 atccctcagt cctttcttgg taaaatgtat ttctatatta gcacgtttcc gcacttgata
     8221 caacttaatt tttaacgctt ttgaaaataa aatagccctt atcttttgcc actgtttcaa
     8281 cgttgccgaa aacttcttcc attttctttt cagcagatgg gccgccttgt ttcttttgaa
     8341 taacaatcca aagttctccg gtttcttgca agtgatcgta agcaccttct aaaatcgcat
     8401 gaactattct tttccctgca cgaattggcg gattactaat aatcgcttgg taatcgttcg
     8461 cagttacgct atcataaacc gaactttcat agatatgcgt attcgtaatt ttattgattt
     8521 ccgcattttc tttcgcaagt tccagtgcgc gcaaattaac gtccaccatt tcaatttggc
     8581 tatcagggaa cgctttcgct accgttaacc ccatcggacc atagccacaa ccaacatcca
     8641 agatttttcc tattttcgtt tctaactcaa aagactcaat caataatctc gaaccaaaat
     8701 cgaccgtatt tttggaaaac acgccattgt cacttgtaaa actcatatta aaacctttta
     8761 acatcacttg ccatgttttt cggttgtgtt taattgtttc gtcgtttgtg tagtaatgat
     8821 tgttagtcaa gaaccgcacc ttcctttcgt atctctagct attttagcat aaaatcttac
     8881 tcggatgtag catttttggt aactcatctt aaacttgatt aattgcaata aaaaagacct
     8941 tagataacaa gtatctaagg tctttaagtt aattacttaa cttctacgtt agcgccaact
     9001 tcttcaagtt tagctttgat ttcttcagct tcttctttag caacgccttc tttaagagct
     9061 ttaggagcgt tatcaactaa ttctttagct tcttttaagc caagaccagt gatttcacga
     9121 accactttga ttactttgat tttagaatct ccagcagaag ctagttctac agtgaattca
     9181 gtttgctcag cagcagcgcc accagcagca gctacagcta caggtgctgc agcagttacg
     9241 ccaaattctt cttcgattgc ttttactaaa tcgttaagtt ctaatacaga tgcttctttt
     9301 acggaagcaa tgatttcttc aatgtttaaa gccattttga aattcctcca ataatataat
     9361 tttttcggat ttaaccgaga tttgtttgta gggtttcccc tgggtagaac agattatgct
     9421 tcttgtcctt ctttttggtc agcaacagct ttagtagcga tagcaagacc gcgaactgga
     9481 gcttgaagta cgttgcaaag catagatagc aatccttcgc gtgatggaag tgttgcaagt
     9541 gctttaattt cttcaagaga agcaacttta ccttcaataa caccggcttt gatttctagt
     9601 gcttcatgat ctttagcgaa atcgttaaga attttcgcag gcgcaactac gtcttcatta
     9661 ctgaatgcga ttgcgttagg accagttagt gctccttcta aaccttcata accgttagct
     9721 tcaacagcac ggcgagttag tgagtttttg taaactttaa actcaatacc agcatcacgc
     9781 aattgtttac gtaattcagt gatttcgcca acgtttaagc cgcggtaatc aacaattact
     9841 gtagacgcac tagctgataa ttttgtttta atttcttcta ctgcactttg tttagcttca
     9901 agaactttac tcatttttcc acctccgtcc aacaattaaa tctaattaaa cagacacaag
     9961 ttccgtttga tcagcaacaa aaaacctctg acaccgtaga catcagaggt ttttgtaaaa
    10021 tgcacgcgga cgcacacttc aaaagaaatc cctcgggtgg caaatttaag cgataaacgc
    10081 gccaactgtc tacggtaagg atatttgatt gtttcaacta gcctatctta tcaaaagaca
    10141 aggggctggt caagttaaat tttataagct agctgggtcg actttgattc caggtccgaa
    10201 agtagttgtt acggaaagat ttttcacgta agtacctttc gcagcagcag gttttgcttt
    10261 ttgtagaacg tcattcacag tacggaagtt ttctactagt ttagcagcat caaaagatac
    10321 tttaccgatt gcagcgtgga cgttaccagc tttatcaaca cggtattcta ctttaccagc
    10381 tttaatttcg ttaactgctt tagttacgtc catagttact gtaccagttt tagggtttgg
    10441 cattaaacct tttggtccaa ggacacggcc taatttacca acttcaccca tcatgtcagg
    10501 tgtagcaacg ataacgtcaa attcaaacca accttggttg attttttcaa cgaattcaga
    10561 ttcaccaacg taatcagctc cagcagcctc agcttcttta gctttttcac cttttgcgaa
    10621 tactaatacg cgttgagttt taccagtacc gtttggtaat acaacagcac cgcggatttg
    10681 ttggtccgct tttttagggt caacgccaag acggaatgct acttcaacag ttgcatcgaa
    10741 tttagcgaag tcaatttttt tagcaagttc aactgcttct tctgcagtgt aaactttgtt
    10801 tgcatcaatt tgttttaaag catcttgata ctttttgcct ttcttagcca tttcttttcc
    10861 tccttaattg tcaaattgtg aaacacacga ttagtcttgg atagtgatac ccatagaacg
    10921 tgcagtacct tcaaccatta gcattgcaga ttcaacattt gcagcgttaa ggtctggcat
    10981 ttttgtttca gcaatttcct gtacttgagc gcgagttaca gatgcaactt ttgttttgtt
    11041 tggttcaccg gatccttttt ccactttagc tgctttttta agtaatacag ctgctggtgg
    11101 agttttagtg atgaacgtaa acgaacggtc ttcaaataca gtgatcacaa caggaataat
    11161 aagaccagct tgatcggctg tgcgagcatt aaactcttta cagaatccca tgatgtttac
    11221 gccagcttga cctaatgcag gtccaactgg aggtgcagga tttgctttac ctgctggaat
    11281 ttgaagttta acttctttaa tcactttttt tgccacgaga catacctcct taagtccgtg
    11341 atgtggttga ctggggctga tatttcccct cccacgttaa aacatacgtc aaaaacgtac
    11401 ttatatatga taccatttta aatgtgtagt tgcaagatta ttttatgaat ttactttaaa
    11461 ttccattgct tctttatcga aataaacatt tttattttca cgccataaat tcaaatacgc
    11521 cgtgtaacct tgtgctgcct tatctatcca tgccggattc acttttttta gtagttgtaa
    11581 tgttttttca aaagcgattt ttctggtgtc tgcttctaaa atattatcgt cgtgccgcat
    11641 gtcttctttc cggtggcgca gttcaaactc cattcccata taccaacaaa tatgcaagaa
    11701 aacctcatat ttaaattcgt caaagtctgt tgttttaaat tcactgttac gtttgccacg
    11761 ttcataacca taaagcatgt aaccatcttg ttcactataa tccatacaaa gctcgccaaa
    11821 acctggccca tcacctaaga acaatgggaa atcgagttct aaaaaatcgg cttctcgttt
    11881 aaattccaga taaatctgct ttgctttgtc cattttgtcg cctccctaat aaaacaacct
    11941 ccacaaataa tgtagaggtt gcacatttta aagtttttcg atttggttga aatccacttc
    12001 gactggcgtt tcacgtccga acatgttaac catgactttc gctttacctt tgtcgttgtc
    12061 catttcgtcc actttaccgg aaaagtcagc gaatggtcct tctttgacca taactgtttc
    12121 accaatttca aagtcagctt ctgcacgttt ttcaaccatg cccatgcttt taagaatgcg
    12181 atctgcttct tctggaagta atggtgttgg ctttgatcca gaacctgctg aaccaacgaa
    12241 gcctgtaaca cctggagtat tacgaactac ataccaagaa tcatctgtca taacgatttc
    12301 tactagtaca taaccaggga aaactttacg tttaattgtt tttgttttac catttttcac
    12361 ttctgtttct tcttcttccg gtacgataac acggaagatt ttatctgaca tgcccattga
    12421 ctctacacgt ttttctaagt ttgctttgac tttattttca taaccggagt aagtatgaac
    12481 tacataccaa tttttttcca ttatttagtt ggcagcaatc ctattttgcc gccatcctcc
    12541 ttttagtata atccaaaata aaaaacccga aagttgtacg ggttttgtct caagtaatag
    12601 tatatcatta tctttgtaaa attcctagca ctacacgata agtttaataa tttgttcgat
    12661 accgaaatca attaacataa agaataaagc aaataaaact actgtaataa ctactgttac
    12721 tgtgtaggtt aaaagttctt ttctagttgg ccacgtaact ttgtgcattt cggatgaaac
    12781 attccgaaag aatcttgcta ttgcagacat accaaaacct ccatatcgtc tattttgttt
    12841 ctcgatgtaa tatatgttta ttgcagtgtc ggcagaattt cttcacttct aaacgcgttt
    12901 ctttctgcgt cccgctaaca ttgactgtat agtttcttga accacactca gaacaagcga
    12961 gggatgtttt cttcttcata aattatctca actccgcaat cattaaatat gccatgccaa
    13021 aaaataggca catttcatcc atataaatat aacatctggc tcttagctag tcaattgttt
    13081 tttcattcta gctgtttcat cattttcttt tttacacgtt gtaaggcatt atcgattgct
    13141 ttctcttttt tgttgaagaa aagcgccatt tcttgatagc tcttaccttc taaatattgt
    13201 tttaatactt ctttttcaaa ttcgcttgtg acttgttcta gttgacgcgc tacatgcgtt
    13261 aaatcttcgt ttttgattaa aaagtcttct ggggtttcgg ctgctttttc ggaaatcacg
    13321 tctaataaag tccagtccat atcatcctca gctattggtg tatctaatga gacagaatta
    13381 ttaagcggaa tattcttctg tctagacgcc cgcttcaccg ccgaaagaag ctgtctgtta
    13441 atacacattt ctgcaaaaga tcgaaaagaa gcttcttttg ttttatcgta atcccgaatt
    13501 gctttgaaaa ggccaatcat cgcttcttga attaaatcgt cccgctccgc accttgcaga
    13561 aaatattggg ttgatttcca gtaaataaca gactgatact tactgaaaaa atattctaac
    13621 gcttctgtat caccgcttct cgctagttca agcatcgcaa gttcttcttg gttcactgaa
    13681 ttatccacta ggctaatcgg ctcctttacg acaggatttc ttctatggtt gctccattat
    13741 acatagtcaa aaacataccg tcaatccctt actcctcgcc tcttctccac ttttcgagct
    13801 gtgaaatgac atcagaatcc agattaaggt ttgatttcgg catttcttcc tgaattcgct
    13861 tgattttctg tccgatttgt ttactcattt cttgaatttc aaaaagtaac tctcgggatg
    13921 aaattcgtag tgcaccttgt ccaaaaatag cccactgttc tgtatagtca gatgttgcta
    13981 ccataatttg cgtccgcacg tttttccatt caatcgcttt ttgttcgatg tactcatctg
    14041 ccgtttcatc ctcatgcgta aaaacgactt cgacttgata tttcttgctt ttcctcttca
    14101 cgccccggac aaactgtgca tcaaaaacga ccacaacccg atatcctgta taactttgat
    14161 attccgccat ccattcaaca agtttatctc ttgccgcttc caaatcacga tctttcaaga
    14221 aactaagttc tggccaagcc ccaatcacat tatacccgtc aacaagcaga atttgttcca
    14281 tctttatttc tccagaggga aacgtttccg ataaacttca taaagtaaca aactagctgc
    14341 aactgacgca ttaagggaag taacttttcc acgcattggt aaatgaacga ggaaatcaca
    14401 tttttcacgt actaagcggc tcatgccaaa cccttcgcta ccaataacaa tagcaagcgg
    14461 catatccaca tccatcgtcc ggtaatcgct actacctttc gcatctgtcc caaaaatcca
    14521 aagcccgcgt ttttgtagtt cttccattgt ccgtaccata ttcgtcacgc gaaccactgg
    14581 tacatattcc atcgccccag tacttgcttt ggctacagtt tgcgtcaaac ctacagagcg
    14641 acgtttcgga ataataatcc catgtgctcc aacagaatcc gctgtacgca taattgatcc
    14701 taagttgtgt ggatcttcta attcatccaa aataatgaaa aatggcattt catctttcgc
    14761 ttcagcagca gcgaataaat cgtctaactc cgcatattga taagccgcca cttgagctgc
    14821 aacaccttga tgcgctccac ctactacttt ttcaatcttt tgtttaggta caaattgaac
    14881 ttgaattttc cgttctttcg ctaatgttaa gacttgtttt aatacgcctt tttgtgaacc
    14941 ttcttgtacg tatattttat ggatatctct atcagatcgt aatacttcaa gaacaggatt
    15001 tctcccgcca atccactctt gctcattttc ttgttccatt agttggtttc cactcctttt
    15061 tctactattt caagcgcctt ttccatccat tcttgtaaac gatccaactc accagctaag
    15121 taaagataac ctagcactgc ttcaaaagat gtggacatac tgtaagttcc agggtcagta
    15181 tttttaggca ctgtatacga cttggcatta cgcccacgct ttgcaattct atcttcttct
    15241 tccgtcaaaa aaccttccgc aatcatagct tttagcgcca cagcttgccc ttttgcagaa
    15301 acgaattttg tcgccgtttt gtgtaactga ttcggttttg tctttccagc agcaagtaaa
    15361 tattcgcgaa taaatttttc ataaactgcg tcacccatgt aagcaagcgc gaggccatta
    15421 agttgtttat attctttcac ttctgccatg atttaccccc gtctaaaccg cgtgccttgc
    15481 gcagtgtctt ccaaaataat atttttttct tttaaaatgt ctcgaatttc atcagcacgt
    15541 gcaaaattac gttcgtttcg cgcttgcaga cgttcttcaa ttaacgcttc tacttcgcta
    15601 tcatccagcg aatcagtttg cgtattttct aatttcaagc ctaatacttc cgcaaacaaa
    15661 cgcatcatgc ttaagaattc gcgcagaaca ttgatagaaa cagtttcttt agccagataa
    15721 atattggcac gctttgcaag ttcgtgaaaa gtagtaattg catttgccgt attgaaatca
    15781 tcatccatat catcttcaaa agcttgtttt aattccgtta gctgttctag ccactcgtcc
    15841 tcatgcgctt cttccacata ttcaccgtca tctgtttgaa tacgatgatc aatattttgg
    15901 tatgcaatca ttaaccgttc caaaccattt ttcgcatctt ctaaaattgc atcattcagt
    15961 gtaattggct tccggtaatg tacagatagc atgaagaaac gaatcacatt tggatcattg
    16021 tcttttagca catcatgcag cgtaataaaa ttcccaagtg atttggacat tttttcccca
    16081 tcaatattta aaaaggcatt atgcatccag tagttcgcga acgttttccc agttgccgct
    16141 tcggattgag caatctcatc ctcatggtga gggaatacta aatcttgccc acccgcatga
    16201 atatcaatcg tgtcaccaag atattttttc gcaagcgccg agcattcaat atgccaaccc
    16261 gggcgcccat taccaaacgg actttcccag aaaatttcac ccggtttagc cgctttccaa
    16321 agggtgaaat caagttcatc ttgcttacgc tcattatatt caacccgagc cccgtgctgc
    16381 aattccgata attcttggcc agatagtttc ccgtaatctt tgaatttttt cgtccggaaa
    16441 tacacatcac cagccgactc atacgcatag cctttttcaa ttagcgtact gatcaattga
    16501 ataatttcat ccatattctc cgttacacgt ggattcacag tcgctttcgc cacattcagt
    16561 tgatctacat catcaaagta agccccaata aaacgatccg ccacttcggg aaccgtcaac
    16621 tttagctcat ttgccgcacg aattaattta tcatccacat ccgtaaaatt agacacgaat
    16681 ttcacatcat aaccacgata cgtaaaataa cgtcgaactg tatcgaaaac aataattggc
    16741 cgcgcattcc cgatatgaat gtagttatac acagtcggtc cgcaaacgta cattttcact
    16801 tcgccatctt tgagtggttt aaaaggctct ttctctcgtt ttaacgtatt aaaaatttgt
    16861 atcgacaatc agatctactc cttttccttc aaaagttttt ctactatatt ttctaattcc
    16921 gcaattcgta atgtcagttc atccatttta ggaaccgcat gtcctaccgt acgaccattc
    16981 aaacgaacaa ccttagcagg aatcccaaca accgttgcgc ctggaggtac atcttttaaa
    17041 acgacagctc ctgctccaat acgcgctcct gctccaattt ccaccggccc aagtactttc
    17101 gctcctgccg aaacaagcgc cccgtcaccg acagttggat ggcgtttccc gcaatctttt
    17161 ccagttccac ctagcgtaac tccgtggaat atcgttacat catccccaat ttctgctgtt
    17221 tcaccaataa caattcctgc accatgatca ataaaaagcc ttctaccaat agttgcgcct
    17281 ggatgaatct ctatattagt ccagaaacga gcgttctgcg ataatacttt tccaaacaaa
    17341 accattttat gacgataaaa aaagttcgcc acacgatgcc accaaagtgc gtgcaatccc
    17401 ggattcgtta aaaaagcatc aaaaaagctt ttcgtcgcag ggtcattctt tataattgtt
    17461 gcaatatctt cttttaagcg agttggcatt ttgttgcctc cttattcaag ttcgtacatt
    17521 ttttcattgg aacctacgcc aacaaaaaaa gcccctccga tacagagacg ctttgcgcgg
    17581 ttccactctg acttgagtac tgccaatttt agcaaatact ccaactctag gggtgggggt
    17641 aacgacccac atttcgtctg acgatactaa atttcccatc agaattcagg gaggcatttc
    17701 aggagtgttc agctaagtcg cttccagcca tggcgactct ctctataaac ttagaattcc
    17761 gtacttcttc ccatcatcac tttttccgta tatttagttc tattataaca gcaataaaat
    17821 tccttgcaac tgaaatatat caaaataaaa aagcaccccg caaatagccg agatgctttc
    17881 attcaaaatt aattattttt caaccatgta tccaaacgat taagcacttt ttcacgacca
    17941 agaacttcga ttgcaagtgg caattcagga ccatgcattt cacccgttgt cacaatacga
    18001 attggcataa ataaaccttt accttttacg cccgtttctt tttgaacccg cttgattgcc
    18061 gcttttactt ccgcagcttc tagaacttct agtgcttcta attctttttt gaatgctgaa
    18121 ataacagttg gaactgtctc ttccgcaagc actgctgtct cttcttcatc aaacgtaatt
    18181 gactctgcat ccgcaaagaa catttctgaa agtggcacaa tttccgcacc atagctcatt
    18241 tgctcatgat aaagtgacac taatttgtgc acccaatcaa gttcagcttg atctaactca
    18301 gcagatacaa cacctgcttt ttgtaaatgc ggtagcgata gttctactac atcatttagt
    18361 ggtaattttt tcacatattg gttattcacc caagtcaatt taacattatc aaataatgct
    18421 ggtgatttag ataaacgctt cggatcaaac attttaatga attcttcttt agagaaaatt
    18481 tcttcttccc cttctggaga ccaaccaagc atagcaataa agttaaacaa agcttctggt
    18541 aaatatccta aatcgcgata ttgttcgata aattgaataa tcgaaccgtc acgtttactt
    18601 aatttacgtc tgctctcatt cacaataagt gtcatatgac caaaaattgg cggctcccag
    18661 ccaaatgcat tataaatcaa aatttgctta ggcgtattcg aaatatggtc atccccacga
    18721 agaacatgag agatttccat tagatggtca tccactgcta cagcaaagtt ataagtcgga
    18781 attccatctt ttttcgcaat aacaaaatcg cctattccat ttgattcaaa agaaacatcg
    18841 tctttcacca tatcgttaaa agtgattgtt tcatttgctg gcactttgaa acgaatactt
    18901 ggtttaaaac cttgcgcttc tttctccgct tgttgttctt ttgttaaatg acgacatttc
    18961 ccgctataac gaggcatttc accgtttgct ttttgttttt cacgttcagc atccagctct
    19021 tcttccgtac aataacattt ataagccaaa ccttcatcca gaagttgttg aattaacggt
    19081 tcataaatgg attgacgttc cgattgacgg taaggtccgt attttccagg aacatccaca
    19141 ccttcatccc agtccatacc tagccatttc aaatttgtca tctgactttc ttcaccgtca
    19201 gctatgttac gtttcgcatc cgtgtcttca attcgaatga taaaatctcc atcattatgt
    19261 cttgcaaata aatagttaaa tagggcagta cgcgcattcc caatatgcaa aaatccagtt
    19321 ggacttggtg cataacgtac acgtactcgt tttgtttcac tcacaattat tcactccttc
    19381 aattattttt caagtaagac aacggctaga cttgcgatgc cttcttcccg accagtaaac
    19441 cctaatttct ctgtcgtagt cgcctttaca ttaacttggg ctgaatccgc atgtagcaac
    19501 tccgcaattc gaagcttcat ttgctccaca tatggcgcca tttttggctt ttcagcaata
    19561 atagtagcat ctagatttcc aagacgaaaa ccatccgcct ctaccttctg ccaaatttcc
    19621 gcaagtagct cagctgaatc cgcatcttta aaagccatat ctgtgtccgg aaaaaaatga
    19681 ccaatatcac cagcaccaat tgcgcctatg atagcatcag taatagcatg aagaagtaca
    19741 tccgcatcac tgtgacctag taaccctttc tcataaggaa ttttaatccc gccaacaatc
    19801 agttctcggt cataagcaag tttatgtaca tcataacctt ggccaattct aatcatttgc
    19861 tatccctcca agttccccta aaatcgcctt agcgagcggc atatcttcag gagttgtcag
    19921 cttaatatta taatagcttc cttggacaat agcaacagga caaggaagtc gctcaaccag
    19981 actagcttca tccgttccta aaaactgttc ttttcgagca agctgatgcg cttttcgtaa
    20041 aataggcagt tcaaaagctt gcggcgtttg aacttgccaa agattttcac ggtcaacagt
    20101 ttcttgaacg acacctttca ccactcgttt caccgtatct tttactttta ctgcacaaat
    20161 cgcggcttta ctttgctcta caccaattaa taatcgatca ataatatcta acgtgataaa
    20221 cggtcttgcg ccatcatgta ctaagacaac ccgctccgtc ccacaacgtt caagacctgc
    20281 tgccacacta tattggcgtt cacttccgcc cttcacaatc tcaattcggc tttcagcaac
    20341 gttaagctga ctcattaatt ctttcacatg ctttctttcc tcttcttgac tcacaacaat
    20401 cactttggaa caacgattat ctgctaaaaa aggacgcaag gcatgaatga aaattggttc
    20461 accaactaac tctagccaca ttttattttt ctgggcattc atccgttttc cttgacctgc
    20521 cgctaaaaaa accaactcat aattcatgct tatttcctcc ttttaatcag gatggtttag
    20581 caaaaatcat tcttcctgct gatgtttgaa gtacactcgt tacttccact tggattgttt
    20641 cattaataaa tttacggcca tcttctacaa caatcatcgt tccatcatct aaatatgcaa
    20701 cgccttgatt gtgttcttta ccatctttca ccatgagaac agtcattttc tcacctggca
    20761 aaacaactgg ttttacagca ttcgccaaat cattaatatt taaaaccggt acattttgga
    20821 attcacatac tttgttcaaa ttataatcat ttgtaacaac aataccgccc attactttag
    20881 caagtttcac aagtttacta tccacttctg gcgtatcttc aaaatcacct tcatacattt
    20941 ccacttgaat agcctcttct ttttggattc gatttaaaat atctaatccc cggcgccctc
    21001 ttgtacgttt aagcgtatcg gatgaatccg caatatgctg aagttcggct aacacaaata
    21061 gtggaataac caccgttcca tctaaaaatc cagtagtcaa aatgtctgca atacgaccat
    21121 caataattac actcgtatcc aaaattttat atgttttctt agatttctct tctgttttct
    21181 cttcttctgg tgttcttttc tttgcatttc tgttattgac aaaatttcca aattcgttgc
    21241 gacgactaat tccgatacgg aaccctaaat aacctagaac taatgttaaa ataactggta
    21301 ctactgaatt taaaagcgga atatttgttt gacttaatgc attgctcgcg aaaaacgcaa
    21361 tgaccaaacc tacaaataaa ccaagtcccc cataaacaag ggttgcaata gcaattttag
    21421 ctaacttttc ctctaaccaa ttaagtgcgg cttctacata tttcaccgcc cagaaagtaa
    21481 taagataaaa tataagtgca ccaatcagag catcagtata aggattatta attagcagaa
    21541 tgtgacctat tccaagtttc acccatagag caggtagtga aaagactccc gttgtcccac
    21601 ctagaattaa aaaacacact cgaattaccc atgtaagcat ttagtttcct cctttccatt
    21661 tttaatttat atatataatt gggctattac caaatataca tatagcacta ttttacacta
    21721 ttaaaagact ataccgcaaa tagtactcac ggaatcaacg aagtatttag ttttaatctg
    21781 gtaaagcttt cttcaaagct tctccaatcg tttccacccc aaccacttgc acgtctttcg
    21841 gtattttcca attaccttcg ttatttttag gaataaaaat tcgcttaaag ccaagttttg
    21901 cggcttcttg tacgcgttgt tcaattcttg caacacgacg aatctcacct gtaagtccaa
    21961 gttctccaat aaagcaatcc gtacttcttg ttggtttatc acgatagcta gatgcaacac
    22021 tgactgcaac cgccaaatcc actgcaggtt catccaattt aaccccacca gctgctttca
    22081 aataagcatc ttggttttgc aacattaaac ctactcgctt ttctaaaaca gccataatta
    22141 gcgaaacttt attatagtct attcctgtcg ccattcgctt agcattacca aacatcgtag
    22201 gcgaaacaag cgcttgtatt tccacaagga cggggcgagt tccttccata gaagctacaa
    22261 ccgttgaacc tgaagcgcct tcaagacgtt cttccaagaa cacttcggaa ggattagcaa
    22321 cttctacaag tccaacatct cgcatttcaa atatacccat ttcattagtg gaaccaaaac
    22381 ggtttttcac tgcacgcaaa atccggtaag catgatgacg ctccccttca aaataaagca
    22441 cagtatcaac catatgttca agtaggcgcg gccccgcaat agcaccttcc ttcgttacat
    22501 gtccaacaat aaagatagca atgttttgca ttttagcaat tcgcatcaat gtcgctgtac
    22561 attccctaac ttgcgaaaca ctccccgctg cacttgtaac atcgggatga taaacagtct
    22621 gaatggagtc aatgactaca aaatcaggct tcacaaaatc aatcgtttct tgaactgctt
    22681 ctaaatttgt ttctgcatac acatataaat tatctcccga aacttgcaag cgttccgccc
    22741 gcagcttcgt ttgtttgata gattcttctc ctgatatata caatactttt ttatttgtga
    22801 gcgtcagttg agctgaaact tgcagtaata aagtcgactt cccgatacca ggatccccac
    22861 cgacaagtac catagatcct ggaaccacac ctccgccaag aactctattt aactccggca
    22921 tattggtttc gacacgtttt tctgtttcac ttgctatttg agtaattgga gtcgctttcg
    22981 aaggttctcc cgtatgatta aaagctgagc gtgatttttt tgacggctcc aaagcttcta
    23041 ccatctgatt ccactcgttg caattcggac attttcccat ccattttgcc gattcatatc
    23101 cacatgcctg acacacaaat ttggttgtcc tttttgcttt agccatttct acatccctcc
    23161 atacatatgc tccattttac cacagatcat ctgttcgcgt taatcctttt catcaaattc
    23221 gtttttttga cacgaatcct gatttttcca taaaaaacct cccttcaaaa ttgattaagg
    23281 gaggcgtgtt tgttatttag tttttacctt ttttgcagtt gttttctttt ttggtgcgtc
    23341 tttttttcta acctctaact tgccatcttt tacaccaatt tccacgtaat cgcctacttt
    23401 aatgttacca cgaagtaatt cttcagaaag catatcttcc acttcttttt gaatagctcg
    23461 tttcaaagga cgggctccgt attctggatc gtatccgtct ttagcaattt tggatttcgc
    23521 accttcagtt aatttcacat gaatatcgcg ttcggctaat cgttttgtta attgagcagt
    23581 cagcaaagta acaatttgtt tcaattcttt ttcttgtagc gaatggaata caattgtttc
    23641 atcaattcgg ttgataaact ctggccggaa cgcctgtttt aaatcttgta aaacacggtg
    23701 ctccatagct ttatggtctt taagcggatc aataacatta aagcccattg atttatcttg
    23761 tttcatttct tgagccccaa tattggaagt cataatgatg accgtatttc taaaatcaac
    23821 cacccgtcct ttagaatcag tcaaacgacc atcgtcaagc acttgtagca acatattaaa
    23881 tacatccgga tgcgcttttt caatttcatc taaaagaact actgaataag gtttttgacg
    23941 aactttttct gtcagttgcc caccttcttc atagcctaca taacctggag gagccccaac
    24001 taaacgagca gtggaaaatt tctccatgta ctcagacatg tcaattcgaa tcatcgaatc
    24061 ctcatcacca aacatagact cagcaagcgc gcgagcaagt tctgttttcc caacaccagt
    24121 aggtccaagg aaaataaagg aaccaatcgg acgtttcgga tctttaagtc ccgcacgagc
    24181 tcgacgtaca gctagcgaaa cagctttcac cgcagcatct tgcccaatca cacgctcatg
    24241 taaaagtttc tccatattta aaagtttatt tgtctctgtt tccgcaagtt ttgcaactgg
    24301 aatcccagtc caacttgcaa caacttcagc aacaatctct tctgttactt cactatggtc
    24361 aagcccttgc ttttcttgcc aattcgcttt tgtttcttct aatgattttt taagtttttg
    24421 ttctttatcg cgtaatgacg ctgctttttc aaattcttgc ccttgaacag ccgcatcttt
    24481 ttcttttttc aaatcggata aattgttttc catttctttt acattttttg gcgttgtaaa
    24541 agatttcaaa cgtactttag aaccagattc atcaataaca tcaatcgctt tatccggtaa
    24601 gaaacggtct gaaatgtacc gatcagatag acgaacagca gcctcaagcg cttcatcagt
    24661 aatcgcaaca cggtgatgcg cctcataacg atcacgcaac ccatgtaaaa tttgaatgga
    24721 ttcttctaca gttggctcat ctactttaat cggttggaaa cgtctctcaa gtgcagcatc
    24781 tttttcaata tatttacggt actcatccag tgttgttgca ccaatacatt gcaactcacc
    24841 acgagctaga ggcggcttca agatattcga ggcatcaatc gcaccttccg ctccaccagc
    24901 accaattaag gtatgcaatt catcaataaa tagaataaca ttgccggctt gacgaatctc
    24961 atccattact tttttcaaac ggtcttcaaa ttcaccacga tattttgtcc ctgccacaac
    25021 agtccccata tccagtgtca ttacacgttt tccacgtaaa gtctcaggca cttcattacg
    25081 aacaatttgt tgcgctagtc cttctgcaat cgctgtttta ccaacaccag gttctccaat
    25141 aagtactggg ttattcttcg tacgacgact aagcacttca atcacacgtt ggatttcttt
    25201 agaacggcca ataaccggat ccaaattatc ttcccgagca ataactgtta aatcacgtgc
    25261 caaactatct aaagtcggtg tagcctgtgt atttgtttgt cttcctgccc cagtagcatc
    25321 cccgccgcct aagagctgta aaacttgctg acgagcttta ttcaaactaa taccaagatt
    25381 acttaaaacg cgagccgcaa ctccttcgcc ttcacgaata agccccagta agatatgttc
    25441 tgttccaaca taagtatgcc ctaatttacg agcctcatcc atggacagtt caattacttt
    25501 tttcgcacga ggtgtatatt ggatcgtcgt cacagctttt tccccatgac caattaatcc
    25561 ttccacctct tgctgcactt tttcagaact aattcccagt tcatagagag ctttcgccgc
    25621 aattccttcg ccttctctta caagccctaa taaaatatgt tctgttccta aattactatg
    25681 attcaaacgc atcgcctctt cttgtgacaa cgcgagtact ttctgagctc tttgcgtaaa
    25741 tcgtccaaac atcattgttg tttcctcctt atcgtaagcc tcatcattta tcgcccaaaa
    25801 tctcgcgaat cactttggcc cgtattactt tctcttctaa ttcatccata tctcgtcctg
    25861 cttctcttct caaaaaagct ggttgcgaga atagtaccaa ttcattcatt ttttggcgag
    25921 aaatatgctc gaaaaatcct aattctacac caagccgtat atccgatata gcatctgaag
    25981 cttctttcat agaaataatt cgacaattca tcaataaacc atatgatcta aaaactctat
    26041 cctcaagtgc aatatgaaat ttttgcttta atgtagttct agcaacacgc tcttgcatga
    26101 taatttgttc catgacttgc gttaaatctt ccacaatttc tgtttccgtt ttaccgagag
    26161 ttacttgatt tgagacctgg aaaatattac ttgcaggcat gctaccttct ccgtatatac
    26221 ctcttaccac aaaacctagg ctcctaatcg cttcaatcac acttttaatc ctttttgttg
    26281 tcacgagtcc cggtaaatgc accattacag aagcgcgcat accagtcccg atattagtca
    26341 cacaactcgt caaatatcca aactctttat caaaagcata actaagcttc tcttccacat
    26401 aaccatcaat ttgcaacgct gcctctaacg catcaaataa tctcaaaccc ggcgtcatgc
    26461 actgtatccg caaatgatct tcctcattca acataatact cacattttct tcctcattta
    26521 aaagaaccgc accatattca cttttattca tcatataagg actaattaaa tgtttttcca
    26581 ccaaaagcgc cttttgtaac aaagaaattt gattcatttt aatcaaagta aaattatcat
    26641 caaaaacttc ggcaatatta tcaacaatct cttccttctg ctcataaact ggaaactgtt
    26701 catccttcaa attcctagca agcctaatac gtgagcttaa aacaacatca tcgtcatcac
    26761 cagcattttc taaccaagaa ctcagccgcg gttcaaatac attcatttat cctcacctcc
    26821 agctttcaaa gccttgattt catcacggac aacagcagct tcctcaaact cctcattttc
    26881 aactagctgt gctagctttt cttgtaagcg actaatttca ttttgaacac cttccgcacg
    26941 ttcaacttct gcaggaacct taccaacatg ttttttatat ccattttgca ctcgaccaat
    27001 aatcggtact aactgtgcct caaaagccga ataacactcc gggcacccaa ctcgattagt
    27061 ctttaaaaac tcttcaaaac taagctggca attctcacaa acaatctctt tctgcgcatt
    27121 ttcttctttt tgcaaaagcg ttaagaagtc aagagcaacc tcactaaaag tatccatcgc
    27181 tttaaccaaa tctttttccg aagagagagc ttcgtccgta gcacaattct cacataggta
    27241 caatgactcc actttcccaa gctcatttaa ttgttgcaag gcaataactg ctttattttc
    27301 tccacatctt tgacaaatca tcgtcatcac accttaatca tatttcaaag caactaacat
    27361 cgcctctaaa atcctacttc tcaaaatatc tctatcgggt aaaggtaaaa ttaaaacttc
    27421 cctgtccaat gccgccacca ttaatcttgc ttctttcttc gttattactt cttcttcaag
    27481 caatctcaaa ataacatctt cagaaaatga ttgagagacc tttttatcat gaaccattga
    27541 aatgattgct tctaacaatt gaagtttatc attcattttc actttaataa tcctaatata
    27601 gccaccacca ccacgtttac tttcaacgat ataccctcgt tccattgtaa atctagtg
//
LOCUS       DASDYO010000021        27554 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.021, whole genome shotgun sequence.
ACCESSION   DASDYO010000021 DASDYO010000000
VERSION     DASDYO010000021.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 27554)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27554)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27554
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.021"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..569
                     /locus_tag="U0290_000811"
     CDS             <1..569
                     /locus_tag="U0290_000811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEM2300859.1"
                     /translation="RRSIYALDKNVSVEDSKIEEIIKDAVKYSPSSFNSQSSRAVILL
                     GENHDKLWNIVEDTLRAIVPAENFAATEEKVGSFRAGYGTVLFFEDTAVIEGLQENFA
                     LYADNFPVWSEQSSGIAQHSVWVALANAGIGASLQHYNPLIDDAVKAEWNIPASWNLR
                     AQMPFGNIVQEAGEKEFIDDADRFRVFK"
     gene            complement(627..947)
                     /locus_tag="U0290_000812"
     CDS             complement(627..947)
                     /locus_tag="U0290_000812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM2300860.1"
                     /translation="MAIIFAKEENLEEIISSHPKILLNFWAEWCAPCRCFWPTLEQFA
                     EMEEGNVQVVKINVDKQRALAQKFDVKGIPNSLVLVDGEIKGGIAGIVSCDELRSRFK
                     SLAK"
     gene            complement(1070..1732)
                     /gene="pgmB"
                     /locus_tag="U0290_000813"
     CDS             complement(1070..1732)
                     /gene="pgmB"
                     /locus_tag="U0290_000813"
                     /EC_number="5.4.2.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-phosphoglucomutase"
                     /protein_id="HEM2300861.1"
                     /translation="MTTALKGVVFDLDGVITDTAHYHYLAWKKTAESIGIEFDEAFNE
                     KLKGVSRIDSLLLILKKDGRENDFTEEQIEALAADKNDFYVSLLKEITPADVLPGIKE
                     LIVDLKKQNLKCAIASVSKNARTVLSALEMEQEFDYIVDAAKITKSKPDPEIFVEACR
                     GLGLETSEVVGIEDAQAGIEAINAAGIVSVGVGSGLRDADMTVKNTGLLDLRILEILH
                     SK"
     gene            complement(1729..2850)
                     /locus_tag="U0290_000814"
     CDS             complement(1729..2850)
                     /locus_tag="U0290_000814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEM2300862.1"
                     /translation="MKIVIAPDSFKESLTAHEVAEYIKEGFQEIYPDADYHLLPVSDG
                     GEGTLEILSKALGAKKMKIDVSGPFGDPVSAQVAFTDGNKKALIEMAEVCGLHLVPTT
                     RRDPLQVSTKGVGELILHAMEKGATEIIIGIGGSASNDGGIGMASALGYEFLDAENNI
                     VNPIGANLADIATIRSEKVPAELENITVNIVTDVENPLCGEAGASYVFGPQKGLAVTD
                     LATADGAMRQFYQLANPAMVTMPRAGAGGGIGAGLVTFAKANLLSGIDFVIEALQIKT
                     VCEDADLVIVGEGKMDGQTAQGKAPVGVAKVVPKETPVFAICGSVGEGLEAVYEVGIS
                     AVFPSIAKPATLENILKETPNNLRRTARNVAAVWKGRVE"
     gene            complement(2847..5024)
                     /locus_tag="U0290_000815"
     CDS             complement(2847..5024)
                     /locus_tag="U0290_000815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEM2300863.1"
                     /translation="MKKIIEKEFALNYLNKYGSQMTVGNGYLGVRGALEEEYPEQVRG
                     MYVAGIYNRPSGSLSSELVNLPDVTRFQVMLDGENFSMQAGKVHAYERYLDMNTGELI
                     RKITWESSAGKKYQLNFHRFVSKAAKHVIAAKVEIMPLSGAAKVKVKTGIDAQQTNFG
                     TQQLAELSLRIFDEKLMVGEYETIESKQHITIATKVNKKGIFTAKNRQLMTEVEQEIA
                     ENQLFTLEKISMVKTSLDQVDAELPNTTYAELKRASETLWADFWEHAGVRVESTNDFD
                     QFALDFACYHLEIMTPKDDFRCSVGAKGLTGEGYKGHVFWDTEIFIMPFFLYNKPEIA
                     KQLLKYRYLHLKEAKEKATKNGYNGALFPWESAFSGEEETPEFAAINIRTGTRQKVAS
                     AISEHHLVADIAYAVCEYETATKDAQFMKECGSELLLETAEFWLSRATNRNGRLEILD
                     VIGPDEYTEHIDNNTYTNYMAHYNVKKALEWNKDNADFVARAEAFLEKIYLPVANESG
                     LIPQDDTFLEKDWINLDKYKAAQGTQGILLDYSRQEVNELQILKQADLVMLFYLFPRM
                     FAPDAVKQNLDYYENRTIHDSSLSKAIHAIVENRTGNRAQAYQFFQEACLIDLGSEPH
                     SSDDGLHAASLGAIWLAVVFGFAGIDTSGELLEIAPNIPDSWQSVAFEFSWKGEKILV
                     EIAQNRLHLSKSTKSVLELVIHGEKHQLTDTLTIKLDQKDVSL"
     gene            complement(5021..6052)
                     /locus_tag="U0290_000816"
     CDS             complement(5021..6052)
                     /locus_tag="U0290_000816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2300864.1"
                     /translation="MKKRVAIIGAGQVAEKVHAAYYKTRNELELVAVCDPSLERGEEF
                     RANNGFEKHYATAEEMFAVEKIDIISICTPNRFHFDNVMLSLANGAAVMCEKPPAMSA
                     AEAKAMWELAEEKGAILAYDFHHRFSSEAQFLKRNSALLGEIYCVKATALRRSGVPGW
                     GTFTNKEMQGGGPLIDMGIHMLDAAMFVLGFPKVKKVTAKSFQKIGTKKSAGTFGSWD
                     PEKYTVEDSLFGFIELENGGLIELDTSFALHIKPESALNVDFFGDLAGGSLYPAEIYT
                     DNAGEFQLLEKLGQLEENKHENSMKAFVDSVLGAGKVELAGAEQGYIIQRIVESLYES
                     AEKGESVSL"
     gene            complement(6109..6903)
                     /locus_tag="U0290_000817"
     CDS             complement(6109..6903)
                     /locus_tag="U0290_000817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEM2300865.1"
                     /translation="MKLGTQNQAFFPENIEEKFAYVKEMGFEGFEIDGKLLVENLDEV
                     KKAIEKTGLPVSTACGGYDGWIGDFIEERRLNGLEEIKAILEALAEVGGQGIVVPAAW
                     GMFTYRLPPMVSPRSQAGDFKAVSESLVYLDKIAGETGTKVYLEPLNRYQDHMINLLS
                     DAQKYIDENELKNVEIIADFYHMNIEEDSIPTVLETYKDSIGHIHVADNHRYQPGSGS
                     LDFKTSFDQLKKNGYNGFLTFECRVRSENPEQAYKDALAHLKSCLI"
     gene            complement(6916..7968)
                     /locus_tag="U0290_000818"
     CDS             complement(6916..7968)
                     /locus_tag="U0290_000818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-binding alcohol dehydrogenase"
                     /protein_id="HEM2300866.1"
                     /translation="MKKLVATAPRVAELVEYNDREVLEDEVKIKVQFASPKHGTEVVD
                     FRGISPFIDEEFSPEWNLFVSRETNSARGIVFGEFQLGNMVVGEVVECGSKVTEYELG
                     DIVCSYGPIMETVIVKAVDNYKLRKLPKGANWKNAVCYDPAQFAMSGVRDAHVRAGDY
                     VVVVGLGAIGQIAIQLAKKAGASVVIGVDPLSHRREIAEKHGADATFDPITTDVGLEV
                     KRLTGKLGADSIIETSGNAAALQAALRGIAYGGTISYVAFAKPFPEGFNLGREAHFNN
                     AKIVFSRAASEPNPDYPRWDRKRIEETCWELLMNGYLDCSDIIDPVVPFADSAESYMK
                     YVDQQPDLSIKMGITL"
     gene            complement(7987..8838)
                     /locus_tag="U0290_000819"
     CDS             complement(7987..8838)
                     /locus_tag="U0290_000819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2300867.1"
                     /translation="MAVSSKKSKRTKKIAFYVTMVAFLCITLFPFAIMLMTSFKSSKE
                     AISTHPTFFPKEFTFQHYIDIFNPDIFPFLTYFKNSLVVSVFAAGIAVVLGILGAYAL
                     SKLRFKGRMTINASFYTVYMFSGILLIVPLFKIISSLGLYDTETALIITMVVQTLPTA
                     VFMLKSYFDTIPTDIEEAAMMDGLNRFQIILRIIVPLAISGIVSVFVYCFMVAWNDYL
                     FASIFLSSAEKFTLPIGLNTLFSTPDYIWGRMMAASLVTALPVVIMYAISERFIKGNL
                     TDGGVKG"
     gene            complement(8825..9706)
                     /locus_tag="U0290_000820"
     CDS             complement(8825..9706)
                     /locus_tag="U0290_000820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2300868.1"
                     /translation="MKTKVYKRSDFKLAMILLAPSFVLLAALVLYPMISNIQISFLDM
                     PLNPNIKSVFIGLQNYIDILKDPEFYKSLGLTVAYTVLVVVGSTGMGLLVAIFFNREF
                     RFRRTARSLIILSYVTPSISLIFAWKYMFNNGYGVINFMTVDVLHLFKEAPLWFDNPV
                     SSFFLVTFFAIWRYFPYAFISFLAILQTVDKSLYEAADMDGANIWDKFKIVTLPAIMP
                     VLATVITLRAIWMFYMFTDVYLLTNKVNILGVYLYKTAFAFNDLGKAAAISVILFVII
                     FVVIIFARKRVDLNGGK"
     gene            complement(9782..11074)
                     /locus_tag="U0290_000821"
     CDS             complement(9782..11074)
                     /locus_tag="U0290_000821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEM2300869.1"
                     /translation="MKKKSLVLLVVVLVLSAVLAACGGKESSSKEVTIEFMHSSVEKE
                     RLDVINKLIADFEKENPTIKIKQIPVEEDAFNTKVVTLARSGKLPAVMEVSQDFAKVM
                     DKDELIDQDAVKEVIDSVGEDKYYEGATNLVRSEDGKSYIAAPLSGWVQGIWYNKKAL
                     ADAGFEEPKNWADIEKVAKKFTNKADKKYGIAIPTAESTMSEQAFSQFALSNKANVLD
                     AKGNVTIDTPEMKEALQYYKDLSAYTMPGSNDVTEIKDAFMNGTVPMAMYSTYILPSV
                     YEEGDPKNIGFAIPEEKEKAVYGTVSGLTISAGLDDEQKKATKKFVEYLSQPENMATW
                     VLMSPGGAQPVNKEVVEQKAYKENEVIKSFGELPNEIAASFNDIQVFGLVDGKNLTKM
                     GDITSSGIIAQMVNNVTVGGGDVSADLKAAQKKAEEGK"
     gene            complement(11071..12771)
                     /locus_tag="U0290_000822"
     CDS             complement(11071..12771)
                     /locus_tag="U0290_000822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphorylase"
                     /protein_id="HEM2300870.1"
                     /translation="MTNLRKRLSRLYAEDVVDSLAARIEARVQQTQQRKLTRKDQWDE
                     KDIVLITYGDQFKEESKKTLKTFKKMYDSYLKSTFEVVHFLPFYPYSSDDGFSVIDYK
                     AVNPELGDWEDIKEMEQSARLMFDFVCNHMSAKSDWFKRYLAGDEEFRNFFVEMDPKM
                     DLSSVTRPRATPVLTPFQFDSGKVGHIWTTFSEDQIDLNFASPEVLYKMIDVLMFYLE
                     EGAEYVRLDAVGFMWKVPGTSSIHLEETHEIVKLFRDLVDIAAPGTIIITETNVPHVD
                     NISYFGNGEKEAHMVYQFPLPPLVLHAIHHGNAEFLRNWAKNLELPEGKRTFFNFLAS
                     HDGIGLNPVRGIIPEAEILALVNDLEEEGALVSYKQNPDGSKSPYEINVTYMDALSKQ
                     ADTDDLRMSRFLVAHAVLMSIPGVPAVYVQSILGSRNDYSGVETTGHNRSINRKKYDL
                     AEITAELEQRGSLRKATYDALTKLISTRKAESLFHPEIPMEVLESTAELFVVKRSSDV
                     ESIILIHNLSEKEVSYSLDSGVYTNLYTGSTVTGSDSIKLSGYEFCWLKTKNYREEQK
                     "
     gene            12996..14021
                     /locus_tag="U0290_000823"
     CDS             12996..14021
                     /locus_tag="U0290_000823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2300871.1"
                     /translation="MASTIYDIAKHAGVSKSTVSRVLNNQANISEESRKKVLEAIDEL
                     NYQPSKLARALTSSGFDAIMVISNRSTTTTTGNPFFSEIIQSISTQAELENFDLILQT
                     AKNSEDELKKCLSKIQEKMIKGIIMLSSPADEDFFHQLDPYNIPIVVTGKVEGHYKNI
                     YSVDTDNFGDSYALTKHLIKQGHQKIACIHAPLDYHVSIDRLAGFRSCLFDHQLDLRN
                     DWIIDSGYSIEDSYKAALRLMEGPDKPTAVFATDDLKVLSIYKMAADKNLQIPADFSV
                     IGYNDKVASSFLSPPLTSIDIPINKLGKKATNLLFRLIHQDKNVPKTTIIKTEMIERE
                     SIQKINV"
     gene            14042..14114
                     /locus_tag="U0290_000824"
     tRNA            14042..14114
                     /locus_tag="U0290_000824"
                     /product="tRNA-Val"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:14075..14077,aa:Val,seq:gac)
     gene            complement(14158..16152)
                     /locus_tag="U0290_000825"
     CDS             complement(14158..16152)
                     /locus_tag="U0290_000825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase family protein"
                     /protein_id="HEM2300872.1"
                     /translation="MTKEYYFIKPELSSPETKQENIDSWLKTQDKTFYDAQIAQERDY
                     CFWCNIVETAKPNSRTSYTSMAYTLNEPNMLNSAGKTSFILSEEEVLYIHTLSVVRDG
                     KVIDKLDDINVKVLDYVRDENQASFNDEKKVTVLIRDLHLNDIFIVETTIERKYEESS
                     IRNDFFRWIYSAPNSYWAYGKYRFELKNETEKKLEANFHYFRDEAGAILEKDKVMVEH
                     NESYTIEKEDYIGEDAKELEITPFVDFVTEQSYPQITKTISDIYQKFYQVNLAEFAAD
                     IVAELDELPTLDHKIKHAIDFVQKEVYYLYNETEMDGHEPQAAEVTYKTKQGDCKAKT
                     VLLKVILDYLDVNSELILVNYGSDVFLPVYTPSPFNFNHAILKITHNNQVYFIDATMS
                     SDQGFLANRQKNSFMYYLEIKSGTELQKQEPFQDEIPSVEEVVYCDVKDNAAEITFER
                     KLRGGMANGSREMFKNDSNKDIINRYNFSIYSNMTLYKKYEENEVDSHFSNTSIQIVE
                     DNKDLNELSIIYKATISDPYIVENKKRYLHFWNWNNFIDDGAEKHFHKDFPYWIDRNV
                     IKTELHLTTDKSIDQQERYTRQECDIKSKYLNHRMTKKIHKNGASCYLEYRPYHNLTI
                     KEKDLEEYVEANKEILKSNWGIGIDIIEDGLFKKLGKLFK"
     gene            complement(16285..16827)
                     /locus_tag="U0290_000826"
     CDS             complement(16285..16827)
                     /locus_tag="U0290_000826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2300873.1"
                     /translation="MENRKQMIKTERLFLSEMTLADTEILFGYWSDDSVTRYMNIEPF
                     QSLQPVEEMIRMLRQLEIEGKALRCVIILQVTGEIIGTCGFNYIDHENHRAEIAYDLG
                     TRFWKRGYATEAVRALMEWGKESFELHRIEAKVDPRNSASIALLEKLGFSKEGLLRDY
                     EKIGETYQDVQLFSWIDEIQ"
     gene            16983..18395
                     /locus_tag="U0290_000827"
     CDS             16983..18395
                     /locus_tag="U0290_000827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2300874.1"
                     /translation="MEQTNKRNTLALISIMLGAFISLLDTTIVNVALPDITTALHATS
                     ETIEWVISGYALAFGLVLILAGRLGDKFGRKNIYIIGITLFLIMSVTAGFADSENSLI
                     ISRVIQGLAAGLFFPQINATIMDMYSGKSLGKIFGILGSVIGVGTAIGPLTGGLLIEL
                     FGTTNGWRAVFFVNVPFVLVTLVLAMLYLPKRTVSTKKISFDLPGVGLLTIALLLLLF
                     PLISNGANDFKPIDYLLMALSIPLFIILYKWSVYQEKKGNQPLIAPNLLKNNQFVSGM
                     LLSLVYFAAFTSIFFVLSLTWQTGFNRSAILSGLAISPFALGSVLAASNSYRLIPILG
                     RKLLMLGVALVIIGLGTVSIVFHLNDGAFSAWLLFLPLFIAGIGSGLTIAPLNSFTLS
                     TVTGVDRGGASGMFNTAQRIGSSFGIAVVGSVFFRTLGNTAATSKASAFSDSLQMSMY
                     VNIVLLVVCFLLVFRLPKNI"
     gene            complement(18436..18750)
                     /gene="rhaM"
                     /locus_tag="U0290_000828"
     CDS             complement(18436..18750)
                     /gene="rhaM"
                     /locus_tag="U0290_000828"
                     /EC_number="5.1.3.32"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose mutarotase"
                     /protein_id="HEM2300875.1"
                     /translation="MERVASIMYLYPGNQEEYKKRHDALWPEMKEALKAHGAANYSIF
                     LDEKTDTLFAYVEVEDKAIYDKIAETEICQKWWKYMAPIMKSNPNNSPVALDLKEVFY
                     LA"
     gene            complement(18763..19584)
                     /gene="rhaD"
                     /locus_tag="U0290_000829"
     CDS             complement(18763..19584)
                     /gene="rhaD"
                     /locus_tag="U0290_000829"
                     /EC_number="4.1.2.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulose-1-phosphate aldolase"
                     /protein_id="HEM2300876.1"
                     /translation="MTKDIMDAVFIKEMAKTTSNLYRLGWDERNGGNITYLLDEKEVV
                     EYLDVKQIIRTIPMDFDGKKLAGKYFLVTGSGKYFKNVEEAPAVNLGVIQVSEDGKAV
                     HLLWGYTDGGLPTSELPAHFMSHIARLSVDPENRVVMHCHATHLLAMTFTHELTEREF
                     TRTLWQMCTECLVVFPEGVGIIPWLVPGTNEIGEATSEKMKENRLIVWPHHGIYGAGK
                     SMDETFGLIETAEKAAEVYTIVMSQGGIKQAITDEQLKALGERFGVEAKAGYLIN"
     gene            complement(19597..20859)
                     /gene="rhaA"
                     /locus_tag="U0290_000830"
     CDS             complement(19597..20859)
                     /gene="rhaA"
                     /locus_tag="U0290_000830"
                     /EC_number="5.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-rhamnose isomerase"
                     /protein_id="HEM2300877.1"
                     /translation="MGQETEISKRYQVAKERYQAIGVDTEKALKTLKDIKISMHCWQG
                     DDVKGFLNPDGELTGGIMATGNYPGAAHTPKQLRQDLEKAYSLIPGKHKLNLHAIYVD
                     TDEKVDLNEIEPKHFTPWVEWAKEQGLGLDFNPTFFSHPMFKDNYTLASPDKEVRDFW
                     IEHGKRSRKISEYFGKELGQTSINNFWVPDGIKDCPIDRYTPRKRLMEALDEVFAEKL
                     DEKYTQEAVESKLFGLGAEAYTVGSHEFYMGYGITRDKLICLDAGHFHPTEVISNKLS
                     SLALFSKGVMLHVSRPVRWDSDHVVIMDDELIEIGRELVRNDLLGITNIGLDFFDATI
                     NRIAAWVVGTRNTQKSLLKALLEPTADLKKMELENDFTSRMAITEELKDFPFGDVWNY
                     FCEINGVPVGLDWLKEVKAYEEDVLLKR"
     gene            complement(20872..22323)
                     /gene="rhaB"
                     /locus_tag="U0290_000831"
     CDS             complement(20872..22323)
                     /gene="rhaB"
                     /locus_tag="U0290_000831"
                     /EC_number="2.7.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhamnulokinase"
                     /protein_id="HEM2300878.1"
                     /translation="MKHYVAVDIGASSGRLILGKLVNEKLQLEEIHRFKNGFTYRDGH
                     ERWEIDQLMQEIFIGLEKVKQLGISECVLGIDTWGVDYVLIGASGEKLADPISYRDKR
                     TLNAVQNLTSEYPREYIYKKTGIQFMELNTLYQLYVEERDLLERAEKILLIPDYIGYV
                     LTGVKVAETTNSSTTQMLNLREQLFDKDLLSHLNIDVEKFAPLTDAGTYLGKVKEEWL
                     EEYDIPNCDVVTVATHDTASAVVGTPAEGENWAFLSSGTWSLIGMELSAPINNEAAFK
                     ENYTNEWGAYGTYRFLKNIMGLWIVQEIARMDDYKHSFAEMAEEASNYPYFKQIINVN
                     DARFNNPENMVDEIKLYCQETGQTIPETIGELTNCVYGSLALYYALELEKMTEITGKK
                     IEKLYIVGGGSNVAMLNQLTAKLAGIEVFAGPSEATAIGNLVVQMINQGEIESMRAGR
                     KIIRNSFEIGEFSCGDVRFEEIKERFTKVLEFN"
     gene            complement(22342..23610)
                     /locus_tag="U0290_000832"
     CDS             complement(22342..23610)
                     /locus_tag="U0290_000832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2300879.1"
                     /translation="MAGSSTSKKGTIAVSLTNYLDSGCIVAGASGLTLWATQFGLSSF
                     AVGLLGAVSANAFGSAIGALIGGHLADKYGRKFIYTYNMLVYMLGVTIIMFAMNFPML
                     LIGFLVTGLSVGAGVPASWTYISEMADPSIRARNIGISQFAWSCGPAIIFTLGIIVSP
                     LGLLGNRLLFLSLLIVAFVAWQLQRKLEESKDWEAEQVKMKESGNRLEHPFKTAFSSM
                     VNVKSVLFLVGVYLFWNLVAGAMGFFMPFVYETVGGLSNTQANLLQAVLWILTAASTY
                     FGFAKFGDRVSHRGLFFVGALMAVASWVVLTFVGMSWVGLWTFVILWGISAGIGAQAF
                     YALWSTELFPTKYRGGVQGVMFFLVRGSTGVWSIVFPVILANLGFTVAGTIMIGLLTV
                     SLLIGVIWAPKTRGRSLDDITKERYGNTID"
     gene            23733..24713
                     /locus_tag="U0290_000833"
     CDS             23733..24713
                     /locus_tag="U0290_000833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2300880.1"
                     /translation="MEALNKKLFRLNSKEKIQKSTGTFVPDLPNGSFLKENGSMELLN
                     DYFFKNKDIYISKHNRFADYPYHTHQFLELNYMYSGSSEQVIEGNKETLHEGELLLLD
                     SGCHHSIKATGEKDILINILFRDQQISLEWLTSIKKKNSLLFDFLLHSSVSEQSLKKY
                     IIFQSAQIPHIQQILNQIITEYFLEEEFSSRIITLYLPILFTELVRKCDTYLADDLTN
                     SQSSTTSTMLEVIKLIESNYRTITLTSAADTLGYNKNYLSNFIKKNTNFTFTELVNKQ
                     KMLAANLLIETTSTPIELIIEKVGFSNKTYFYSLYKKTFNLLPNEVRNKK"
     gene            complement(24763..25224)
                     /locus_tag="U0290_000834"
     CDS             complement(24763..25224)
                     /locus_tag="U0290_000834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ASCH domain-containing protein"
                     /protein_id="HEM2300881.1"
                     /translation="MAIYKDSVHEMWEKYRTEYPMISSKFEAWAFGNSNQMANELGGL
                     VMDGIKTGTSSLFYWYDQGGETMPSVGSHVVLLDGNEEAMGIIKLTGVTIMPFNEVPE
                     TFAYLEGEGDRTLEYWREVHTSFFSNECVELGIPFEEDALVVCEEFEVVYK"
     gene            complement(25279..25899)
                     /locus_tag="U0290_000835"
     CDS             complement(25279..25899)
                     /locus_tag="U0290_000835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein jag"
                     /protein_id="HEM2300882.1"
                     /translation="MRDITAQGSNVEEAIQNALATLETTRDKVEVEVLDEGKKGIFGI
                     GSRLAMVKVIEKEDGIQVAIDYLLDVATKMGAVITIDVEEVGKDVKLQIKGDSLGMLI
                     GKHGQTLNALQYLTQLIANKTTSQYKNIIVNVGDYRERRHETLVILANKMADKALKTK
                     RAVHLEPMPSFERKIIHAILSENEQIETHSEGRDPYRYIVIKPVRK"
     gene            complement(25896..26759)
                     /gene="yidC"
                     /locus_tag="U0290_000836"
     CDS             complement(25896..26759)
                     /gene="yidC"
                     /locus_tag="U0290_000836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEM2300883.1"
                     /translation="MKKKKRFKQKLLIASLVIGLMAVLSGCGYSTDPITSESTGFWSH
                     YIVFPLSWTITWFSDLFGGSYAVGIIVVTILIRLLIMPLMIKQLKSQKAMTNLQPKIK
                     ELQEKYSSKDNETKQKLQQETMRLYQENSVNPMMGCLPLLIQMPILLGFYQAISRTAE
                     IKTDSFLWMQLGNPDPYYILPVVAALTTFLSSKISMMGQTQQNKSMAMIVYIMPVMIL
                     FMGITLPSALALYWIIGNIFTVFQTLLINNPFKNKREQEALAAAQVAEDRLKKKAANM
                     KASKKGGKKRK"
     gene            complement(26800..27159)
                     /gene="rnpA"
                     /locus_tag="U0290_000837"
     CDS             complement(26800..27159)
                     /gene="rnpA"
                     /locus_tag="U0290_000837"
                     /EC_number="3.1.26.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P protein component"
                     /protein_id="HEM2300884.1"
                     /translation="MKKKYRIKKNDDFQKVFRRGKSFANRQFVVYTLKQEGSNHFRIG
                     LSVSKKIGNAVCRNRIKRYIRQSFHELESQINPENEYIIIARKPAANMDFHEVKKSLI
                     HVLKVGRVLKQKPNNSK"
     gene            complement(27249..27383)
                     /gene="rpmH"
                     /locus_tag="U0290_000838"
     CDS             complement(27249..27383)
                     /gene="rpmH"
                     /locus_tag="U0290_000838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003397591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L34"
                     /protein_id="HEM2300885.1"
                     /translation="MKRTYQPSKRKRKKVHGFRTRMSTKNGRRVLASRRRKGRKVLSA
                     "
BASE COUNT         8200 a         6207 c         4251 g         8896 t
ORIGIN      
        1 ttcgtcgttc catttatgca ctagataaaa acgtttccgt tgaggattcc aaaattgaag
       61 aaattattaa agacgctgtt aaatatagcc catcttcatt caactcccaa agctctcgcg
      121 ctgtcattct tttaggagaa aaccatgata aactttggaa tatcgtagaa gatacattac
      181 gcgctatcgt acctgctgaa aactttgcag ctacagaaga aaaagttggt tctttccgcg
      241 ctggatacgg aacagttctt ttctttgaag atactgctgt tattgaaggc ttacaagaaa
      301 acttcgctct atatgcagac aacttccctg tatggtctga acaatcttca ggtattgcac
      361 aacattcagt atgggttgct cttgcaaacg ctggaattgg tgcatctcta caacattaca
      421 acccactaat tgacgatgct gttaaagctg aatggaatat tcctgcaagc tggaacttac
      481 gcgcgcaaat gccgtttggt aacatcgttc aagaagctgg cgaaaaagaa ttcatcgatg
      541 acgctgatcg tttccgcgtt ttcaaataat aaatgtttca cgtgaaacaa aaaattccgc
      601 gaccattaac tggtatcgcg gaatttttat tttgccaaac ttttaaatct gcttctaagt
      661 tcatcacaac ttacaatacc agcaatcccg cctttaattt ctccatcaac aagaacaagc
      721 gaatttggta ttccttttac atcaaatttc tgagctaatg cgcgttgttt atctacatta
      781 attttcacaa cttggacatt accttcttcc atctcagcga attgctcaag tgttggccaa
      841 aagcagcgac acggtgcgca ccactctgcc caaaaattaa gtaatatttt aggatggcta
      901 ctaataatct cttccaagtt ctcttctttt gcaaaaataa tcgccataca tatccacctc
      961 acattcagaa tattccaaag ttgtattgtg gtcaagcaaa gggttttaga atagcaatat
     1021 atcttgcttt ttgttcattt tttgacactt ttgtttcacg tgaaacattt tatttgctat
     1081 gtaatatctc taaaatacgt aaatctagca aaccagtatt tttcactgtc atatccgcat
     1141 cacgaagtcc agaaccaaca ccaacgctta caattccagc tgcattaatt gcttcaattc
     1201 cagcctgggc atcttcaatc ccaactactt ctgatgtttc taaacctaaa ccgcgacatg
     1261 cttccacaaa aatttccgga tcaggttttg atttagtaat tttagccgca tcaacaatgt
     1321 aatcaaattc ttgttccatt tcaagagcac tcaataccgt ccgagcattt ttcgaaacag
     1381 atgcaattgc gcatttgaga ttttgctttt taagatccac tataagttct ttaattcctg
     1441 gtaaaacatc cgctggcgta atttctttta gcaagctaac ataaaagtca tttttatcag
     1501 ctgcaagagc ttcaatctgc tcttctgtaa agtcattttc gcggccgtct ttctttaaaa
     1561 taagaagtag ggagtcaatt ctgcttaccc cttttaactt ctcattaaat gcttcatcaa
     1621 attcgattcc aatactctca gctgtttttt tccaggctaa gtaatgataa tgtgctgtat
     1681 ctgtgatgac gccatctaaa tcgaaaacta ctccttttaa tgctgttgtc attctactcg
     1741 tcctttccaa actgccgcaa catttcgcgc ggttcttctt aaattatttg gtgtttcttt
     1801 cagtatattt tctaaagttg ctggtttggc aatggatgga aatactgcgc tgattccgac
     1861 ttcatatact gcttctagtc cctcaccaac acttccacaa attgcaaaaa ctggtgtttc
     1921 tttcggcact actttcgcaa cacccacagg agctttccct tgtgcggttt gcccgtccat
     1981 tttcccttcg cctacaatga ccaaatctgc atcctcacaa acagttttga tttgaagtgc
     2041 ttcaataaca aaatcaattc ccgataaaag gttagctttt gcaaacgtca caagtccagc
     2101 accaatccca cccccggcac ctgctcgcgg cattgtaacc atggcgggat tcgctaactg
     2161 ataaaactgg cgcattgccc catcagctgt tgctaaatct gtaacggcta gccctttttg
     2221 tggaccaaac acatacgatg cgccagcttc tccacaaagc ggattttcga catccgtcac
     2281 aatatttact gtgatgtttt ctagttcagc tgggactttt tcggaacgaa tggttgctat
     2341 atcagctaaa tttgcgccaa tcgggttgac gatattattt tctgcatcta ggaattcata
     2401 accaagcgca ctagccatgc caattccgcc atcgtttgaa gcgcttccac caatcccaat
     2461 aataatctcg gtcgcacctt tttccatggc gtgcaaaatt agctcgccca ctcctttagt
     2521 actcacttga agtggatcgc gtctagtcgt cggaaccaag tgcaaaccac aaacttcggc
     2581 catttctatt aaagcttttt tgttcccatc cgtaaaagca acttgtgctg aaactgggtc
     2641 accaaaaggg ccggacacat cgattttcat ttttttcgca cctaaagctt tacttaaaat
     2701 ctctagcgta ccttccccgc catcactgac agggagtaaa tgataatcag catccggata
     2761 aatttcttga aagccctctt taatatactc tgccacctca tgcgccgtca aactttcttt
     2821 gaatgaatcc ggtgcaatga caattttcat aaagacacat ccttctgatc caacttaata
     2881 gttaatgtat ctgttaattg atgtttttct ccgtgaataa ctaattctag cacgcttttt
     2941 gtgctttttg aaaggtgtaa tctgttttgc gcaatttcta ccaagatttt ttcacctttc
     3001 caagagaatt caaatgccac agattgccag gaatccggta tgtttggcgc gatttcaagt
     3061 agttctccac tagtatctat acccgcaaat ccaaaaacca ccgccaacca tattgcgccg
     3121 agtgaggccg catgaagccc gtcatccgat gaatgtggct cactaccaag gtcaattaag
     3181 caagcctctt gaaaaaattg ataagcttgt gcgcgatttc cagttcgatt ttctacaatt
     3241 gcatggattg ctttacttaa agaggaatca tgaattgttc gattttcata gtaatccaaa
     3301 ttctgcttca cagcatctgg tgcaaacatc ctcggaaaca ggtaaaacaa catgactaaa
     3361 tctgcttgct ttaagatttg tagttcgttc acttcttgac gagaataatc tagtagaatc
     3421 ccttgtgttc cttgtgccgc cttatattta tccaaattta tccaatcttt ttctaagaaa
     3481 gtatcatctt gcggaattaa gccagactca tttgcgacag gtaaatagat tttttcaaga
     3541 aaagcttctg cacgggctac aaaatctgca ttatctttat tccattctaa agcttttttc
     3601 acattatagt gtgccatata attcgtatac gtattattat cgatatgctc ggtgtattcg
     3661 tctggaccaa tcacatcaag gatttccagt cgtccattac gattagttgc acggcttagc
     3721 caaaattccg ctgtttcaag gagcagctct gaaccacact ctttcataaa ctgagcatcc
     3781 ttagtcgccg tttcatattc acaaaccgca taagcaatat ccgcaactaa atgatgctcc
     3841 gaaatcgccg acgctacttt ttgacgtgtg ccagttcgaa tattaatcgc tgcaaattca
     3901 ggcgtttctt cttcgccaga gaatgcactt tcccacggaa aaagcgcccc attatagccg
     3961 tttttcgttg ccttttcttt cgcttctttc aaatgaaggt agcgatattt taataattgt
     4021 ttggcaattt ccggcttatt ataaaggaaa aatggcataa taaaaatttc tgtatcccaa
     4081 aaaacatgcc ccttgtaacc ttctccggta agtcccttcg caccaacact acaacgaaaa
     4141 tcatctttcg gcgtcataat ttctaagtga tagcacgcaa aatctagtgc aaattggtca
     4201 aaatcattcg tgctctcaac acggacaccc gcatgctccc aaaaatctgc ccataaagtt
     4261 tccgaagctc ttttcaattc tgcataagtc gtatttggaa gttccgcatc cacttgatcc
     4321 agggatgttt taaccatgct tattttctcc aaagtaaata gttgattttc agcgatttct
     4381 tgctctactt cggtcattaa ttgtctgttt ttcgcagtga aaatcccttt tttattcact
     4441 tttgttgcta ttgtaatatg ctgtttgctc tcgatggtct catattcgcc aaccatcaac
     4501 ttctcatcaa aaattcgtag actcaactcc gccagctgct gtgttccaaa attagtttgt
     4561 tgcgcatcaa taccagtttt tactttgact ttcgccgcac cgctcaaagg cattatctcc
     4621 actttagcag caatgacgtg ctttgctgct tttgaaacaa atcggtgaaa attcagttga
     4681 tacttcttgc ccgcgctact ttcccaagta atttttcgaa ttaattctcc tgtattcata
     4741 tctaaataac gctcgtaagc atggactttc cccgcttgca tcgaaaaatt ttccccatca
     4801 agcatcactt ggaaacgcgt cacatccggc aaattaacaa gttccgaact cagcgaaccg
     4861 ctcggacgat tataaatccc cgccacatac ataccgcgaa cttgctccgg atattcttct
     4921 tcaagagcac cgcgcacgcc caaatagcca tttcccacag tcatttggct accatattta
     4981 tttagataat ttaatgcaaa ttccttctcg attattttct tcataaagaa acactctcac
     5041 ctttttctgc cgattcgtat aaactttcaa caattctttg tatgatataa ccttgttcag
     5101 cgccagcaag ttccactttt ccagcaccaa gaacgctatc aacaaatgct ttcatgctgt
     5161 tttcgtgttt attttcttcc agttgtccta acttctctaa caactgaaat tcacctgcat
     5221 tatctgtata aatttcagcc gggtataaac ttcctcctgc taaatcaccg aaaaaatcaa
     5281 catttagcgc actttctggc ttgatatgta gcgcaaaaga agtatctaat tcaattaatc
     5341 ctccattttc cagttcaata aagccgaata aagaatcctc taccgtatat ttttccggat
     5401 cccatgaacc aaatgtcccc gcacttttct tggttccgat tttttgaaaa ctttttgccg
     5461 ttactttctt cacttttgga aaaccaagga caaacatcgc cgcgtcgagc atgtgaattc
     5521 ccatatcaat cagcggaccc ccgccttgca tttctttatt cgtaaaagtt ccccaacccg
     5581 gcacgccaga acgacgaagc gcagttgctt tcacacaata aatttcacct agaagcgccg
     5641 aatttctctt taaaaactgt gcttcactgg aaaaacgatg atgaaaatca tacgccaaaa
     5701 tcgcgccttt ttcttccgca agttcccaca ttgctttcgc ttccgccgca ctcattgcgg
     5761 gtggcttttc acacataacg gccgctccat tcgctagtga caacatcaca ttatcaaaat
     5821 ggaaccgatt aggcgtgcaa atactaataa tatcgatttt ctcgaccgca aacatctctt
     5881 ctgccgtagc ataatgcttc tcaaaaccat tgttcgcacg aaactcttcg ccacgctcca
     5941 aacttgggtc gcaaacagct acaagctcca gttcatttct tgtcttataa tacgcagcgt
     6001 ggaccttctc agcgacttgt ccagcaccga taattgcaac tcttttcttc atatccgaaa
     6061 ctccttttag aaaaatccgt ccgctttaat tgggacggat tttctatttt aaattaaaca
     6121 gctttttaaa tgtgccaacg catctttata agcttgttct ggattttcac tgcgaacacg
     6181 acattcaaaa gttaaaaatc cgttgtaacc gttctttttc agttgatcaa aacttgtttt
     6241 aaaatcaagg ctaccgcttc ctggttggta gcgatgattg tcagcaacat gaatgtgacc
     6301 gatcgaatct ttatacgtct caagcacagt cggaatgcta tcttcttcaa tattcatatg
     6361 atagaaatca gcgataattt ctacattttt aagttcattt tcatcaatat atttttgcgc
     6421 atcacttagc aaattaatca tatgatcttg gtatctgtta agcggctcaa gataaacctt
     6481 cgtcccagtt tcaccagcaa ttttgtccaa ataaaccaac gactcgctca ctgctttgaa
     6541 atctccggct tggctacgcg gcgaaaccat tggcggaaga cgatacgtga acatccccca
     6601 cgccgctgga acgacaatcc cttgcccacc gacttctgct aaagcttcta aaatcgcttt
     6661 aatttcttct aaaccattca gtctgcgctc ttcaatgaag tcaccaatcc agccgtcata
     6721 gccaccacat gcagtactaa caggtagccc cgttttttcg atagctttct tcacttcgtc
     6781 caaattttca acaagtaatt taccatcaat ttcaaaacct tcaaagccca tttcttttac
     6841 ataagcaaat ttttcttcta tattttctgg gaaaaatgct tggttttgtg tgcctaattt
     6901 cattattatc gctccttaaa gggtaatccc cattttaata cttaaatcag gttgttgatc
     6961 gacgtatttc atgtagctct cagctgaatc tgcaaacgga acgactggat caataatgtc
     7021 cgaacaatcc aagtaaccgt tcatcagtag ttcccaacaa gtctcctcga tacgcttacg
     7081 atcccagcgc ggataatccg gatttggttc actagccgca cgtgaaaaga caattttcgc
     7141 attgttgaaa tgagcttccc gaccaagatt aaatccttct gggaaaggtt tcgcgaaggc
     7201 tacataagaa attgttccgc cgtaagctat tccgcgtagt gccgcttgaa gtgcagccgc
     7261 attcccgctc gtttcaataa tcgaatccgc accaagttta ccagtaagac gcttcacttc
     7321 taagccaaca tctgtcgtaa ttggatcaaa agtagcatct gctccatgtt tttcagcaat
     7381 ttcacgacga tgactaagtg gatccacccc gataacaaca cttgctccag cttttttcgc
     7441 cagttgaatc gcaatttgac caatcgcacc aagtccgaca acaacaacat aatcgcccgc
     7501 acgaacatgt gcatcacgca cgccactcat cgcaaattga gccgggtcat agcaaaccgc
     7561 gtttttccaa ttagcacctt ttggcaattt acgtagttta taattatcga cagcttttac
     7621 aataacagtt tccataatcg gtccgtaaga acaaacaata tctccaagct cgtattctgt
     7681 tactttgctc ccacattcaa ctacttcacc aacgaccatg ttacctagct gaaactcgcc
     7741 aaatacaatg cctcgcgcac tatttgtttc acgtgaaaca aataaattcc attctggtga
     7801 aaattcttca tcaataaaag gactaattcc tctaaaatca actacttctg taccatgttt
     7861 tggagaagcg aattgaactt taattttcac ttcatcttct aaaacttcac gatcattata
     7921 ttctactaat tccgccacac gaggcgctgt cgctactaat tttttcattt tcaataactt
     7981 cctttcttat cccttaactc caccgtctgt taagtttcct ttgataaatc gttctgaaat
     8041 tgcgtacata ataacgactg gaagcgccgt aacaagcgat gcagccatca ttctacccca
     8101 aatataatca ggtgtactaa ataatgtatt caagccaatc ggtaacgtga atttctctgc
     8161 gctagataag aaaatcgaag caaacagata atcattccaa gctaccatga agcagtatac
     8221 gaacacagaa acaatacccg aaatcgcaag cggaacaata attcgtaaga taatctggaa
     8281 gcgattcagc ccgtccatca ttgctgcttc ttcaatatca gttggaatcg tatcaaaata
     8341 acttttcagc ataaatactg cagttggtag tgtttgtaca accatcgtga taattaaagc
     8401 tgtttccgta tcatataacc ccaaactcga aattatttta aacaacggaa caattaacaa
     8461 gattccggag aacatataaa ccgtgtaaaa actcgcatta atcgtcatac gccctttaaa
     8521 gcgtaatttc gacaacgcat aagcgcctaa aatccccaaa acgactgcaa tcccggccgc
     8581 aaaaaccgaa acaaccaaac tatttttaaa gtacgttaaa aacggaaaaa tatctgggtt
     8641 gaaaatatcg atgtaatgct ggaaagtgaa ttctttcggg aaaaatgttg gatgtgttga
     8701 aatggcttct ttactgctct taaatgaagt cattaacata atcgcaaatg ggaacaacgt
     8761 gatacataaa aatgcaacca tcgtcacata aaacgcgatt ttctttgttc tttttgactt
     8821 tttactactt accgccattc aaatccaccc gctttcttgc aaaaataatc acaacaaaaa
     8881 taatgacaaa taatatgaca gaaatcgctg ctgctttccc taaatcattg aatgcgaatg
     8941 ctgttttata taaataaact ccaaggatgt ttactttatt cgtgagtaag tatacatcgg
     9001 tgaacatata gaacatccaa atcgcacgaa gcgtaataac tgtcgcaagt accggcataa
     9061 tcgctggcaa agtaacaatt ttgaatttat cccaaatgtt cgctccgtcc atatcagccg
     9121 cctcataaag cgacttatcg accgtttgca aaatcgctaa aaacgaaata aatgcatacg
     9181 ggaagtaacg ccatattgca aaaaaggtta ctaaaaagaa actagaaact ggattatcaa
     9241 accaaagtgg cgcttctttg aacagatgga gtacatccac agtcataaaa ttaattacgc
     9301 cataaccatt attaaacata tatttccatg caaaaataag agaaatagat ggtgttacat
     9361 atgacaaaat aataagcgac cgagccgttc ttctaaaacg aaattcgcgg ttaaagaaaa
     9421 tcgccacaag tagtcccatc ccagtacttc caaccactac aagtactgta taagccacag
     9481 taagacctag tgatttataa aactctggat ccttcaaaat atctatatag ttttgtaaac
     9541 cgataaagac tgatttaata ttcggattta gcggcatatc taaaaaacta atctggatat
     9601 ttgaaatcat cggatataaa acaagtgctg ccagtaaaac aaaacttggc gcaagtaaaa
     9661 tcattgctaa cttaaagtcg gaccttttat atactttcgt tttcataatg cctccttaaa
     9721 tcaaaaagcg acgtactaaa ctgttaaaaa agacggggag actcaactcc ccgctatttg
     9781 attatttacc ttcttcagct tttttctgtg cagcttttaa gtccgctgat acatcgccac
     9841 cgccaacagt tacgttatta accatctgtg cgataatgcc tgagctagta atatctccca
     9901 tttttgtaag gtttttaccg tcaacaagtc cgaaaacttg gatgtcattg aatgatgctg
     9961 cgatttcatt tggaagttca ccaaacgatt taattacttc attttctttg tatgcttttt
    10021 gttctactac ttctttattt actggttgcg ctccacctgg agacattaat acccaagttg
    10081 ccatattttc tggttgagac aagtattcaa caaatttctt cgttgctttc ttttgctcat
    10141 catcaagtcc tgctgaaata gttaaaccag aaactgtacc ataaactgct ttttcttttt
    10201 cttctggaat tgcgaaaccg atattttttg gatcgccttc ttcataaacg gatggaagga
    10261 tatacgtaga gtacattgcc attggaactg ttccattcat aaatgcatct ttaatttcag
    10321 ttacatcatt tgaaccaggc atcgtgtatg ctgacaaatc tttataatat tgaagtgctt
    10381 ctttcatttc tggtgtatca atcgttacat taccttttgc atctaaaaca ttggctttat
    10441 tagaaagtgc gaattgggag aaagcttgct cactcatcgt gctttctgct gttggaattg
    10501 caataccgta ttttttatct gctttatttg tgaatttttt cgctactttt tcaatatccg
    10561 cccagttttt aggttcttca aaaccagcat cggctaaagc ttttttgttg taccaaatac
    10621 cttgaaccca accgcttaat ggtgctgcga tatagctttt accatcttca gaacgtacta
    10681 agtttgttgc accttcgtag tatttgtctt ctccaaccga gtcgataact tctttcactg
    10741 catcttgatc aatcaactca tctttatcca ttactttggc aaaatcttgg cttacttcca
    10801 taactgctgg aagtttacca gagcgagcaa gtgtgacaac ttttgtatta aacgcatctt
    10861 cttcaactgg aatttgtttg attttgattg ttggattttc tttttcaaaa tcagcaatta
    10921 atttattaat aacatctaaa cgctcttttt caacggatga atgcataaat tcaatcgtta
    10981 cttccttact actagactct ttccctccac atgcagctag aaccgcactt agaaccaaca
    11041 caacaacaag taatacaaga ctctttttct tcatttttgt tcctccctgt aatttttggt
    11101 ttttagccag cagaattcat agccactaag ctttatggaa tcgctcccag ttactgtgga
    11161 gcccgtataa agatttgtat aaacaccgct gtctagtgaa taactcactt ctttttctga
    11221 taaattatga atcaatataa tcgattccac gtcggatgaa cgtttaacaa caaacaattc
    11281 cgccgtagat tctaaaactt ccatcggtat ttctggatgg aaaagtgatt ccgcttttcg
    11341 tgtgctaatt aatttcgtta acgcatcata agttgctttt cgtaaggagc ctctttgttc
    11401 caactctgct gtaatttccg ccaagtcgta tttttttcga ttaatagagc gattgtggcc
    11461 tgttgtttct acgcctgaat aatcattgcg gcttcctaaa atactttgaa cataaacggc
    11521 tggaacgcct gggatagaca ttagtactgc atgagccaca agaaatctcg acatcctcaa
    11581 gtcatctgtg tccgcctgtt tacttagcgc atccatgtac gtcacgttaa tttcatacgg
    11641 actcttagaa ccatctggat tttgcttata tgaaacgagc gcgccttctt cctccaaatc
    11701 attcactaaa gccaaaattt cagcttctgg aataatgccg cgcactggat ttaacccaat
    11761 cccatcatgt gaggcaagga aattaaagaa tgttcgcttg ccttctggta gctctaaatt
    11821 cttcgcccag ttacggagga attctgcatt accatgatgt atcgcatgga gcacaagtgg
    11881 tggaagcggg aattgataaa ccatatgcgc ttctttttca ccatttccaa aataactaat
    11941 attatcaaca tgcggcacat tggtttcggt tataataatc gtccccggag ctgcaatgtc
    12001 tactaaatct ctaaataatt tcacgatttc atgcgtctct tctaaatgaa tcgagctcgt
    12061 tcccggcact ttccacataa agccaaccgc atcaagtcgc acatattccg caccttcttc
    12121 taaatagaac atcaaaacat caatcatctt gtaaagcact tccggagaag caaagtttaa
    12181 atcgatttga tcctcactaa aagtcgtcca aatatgccct acttttcctg aatcaaattg
    12241 aaatggtgtc agcactggtg tcgcacgtgg ccttgttacc gaactaaggt ccatctttgg
    12301 atccatttcc acaaaaaagt tcctaaactc ctcgtcaccc gccaaatatc gcttaaacca
    12361 atcacttttc gccgacatat gattacaaac aaaatcaaac atcaagcgcg ccgactgttc
    12421 catctcctta atatcttccc aatcacccag ctccgggttc accgctttat aatcgatgac
    12481 cgaaaaccca tcatccgaag aataaggata aaaaggcaag aaatgaacta cctcaaaagt
    12541 cgattttaaa taactatcat acattttctt aaaagttttt aacgtttttt tggattcctc
    12601 tttaaattgg tctccatatg taattaaaac aatatctttc tcgtcccact gatcttttcg
    12661 tgttaacttt cgttgttgcg tttgctgtac ccgcgcttcg attctagctg ccaaactatc
    12721 taccacatct tcggcatata accgcgaaag tcgttttctt aaattcgtca tcatttacct
    12781 cctaaccggg agcgctccca caagaagaat tatagtatgg aaagcgcttt ctgtcaaaca
    12841 caatttttaa tgttttttct aacacgttga taatagtgag ttttctctca tatataacat
    12901 ctagttggac atttactaga aaattgagta atataaacat ggatgataat gaccggaacc
    12961 gataccggaa acaataaaga gaaaggaaga ttaccttggc atcaaccata tatgatatag
    13021 caaaacatgc gggagtttca aaatcaacgg tatctagagt actaaacaat caagctaaca
    13081 tttccgaaga atcacgaaaa aaagtactag aagcgattga cgaactaaac taccagccaa
    13141 gcaaactagc gcgcgcactt acctcttcgg gctttgatgc tatcatggtt atttcaaatc
    13201 gctctactac aaccacaacc ggaaacccat ttttttccga aataattcaa tcgatttcca
    13261 ctcaagctga gttggaaaat ttcgacctaa ttcttcaaac tgctaaaaac agcgaagacg
    13321 aacttaaaaa atgcctctcc aaaattcaag aaaaaatgat aaaaggcatt attatgctaa
    13381 gttctcccgc tgatgaagat ttttttcacc aattagaccc gtataatatc cccatcgtcg
    13441 tgaccggaaa agtagaaggt cattacaaaa atatatactc tgttgacacc gacaattttg
    13501 gcgacagtta tgctctaaca aaacatttaa tcaagcaagg tcatcaaaaa atcgcttgta
    13561 tccatgctcc actcgattat cacgtgtcga tagatcgtct tgctggtttc cgcagctgcc
    13621 tgtttgacca ccaattagat ttacgtaacg actggattat tgatagcggt tatagtatag
    13681 aagatagcta caaagcagca ctacgcctaa tggaaggccc agataaacca accgcagttt
    13741 tcgcaaccga cgatttaaag gtccttagca tttacaaaat ggccgccgat aaaaacttac
    13801 aaatccctgc agatttttcc gtcatcggct ataatgataa agtagcgtcc tctttcttgt
    13861 cgccgccgct aacgtctatt gatattccaa tcaacaaact agggaaaaaa gcgactaact
    13921 tattattccg cttaatccat caagataaaa atgtaccaaa aacaacgatt attaaaaccg
    13981 aaatgattga acgtgaatcc attcagaaaa taaacgtcta aacttatttt ctgagtttac
    14041 tggtcctgta gctcagttgg gagagtatca ccttgacatg gtgggggtcg ctggttcgag
    14101 accagtcggg accatttata aaaaaagcac ccttttataa aggatgcttt ttttatttta
    14161 tttaaataac ttacctaatt tcttaaacaa tccatcctca atgatatcaa taccgatacc
    14221 ccagttactc ttgagaattt ctttattagc ttccacatat tcttccaaat ccttctcttt
    14281 aatagtgaga ttgtgatatg gacgatattc taaataacaa gaagctccgt ttttgtgaat
    14341 tttcttcgtc atacgatggt tcaaatactt agatttgatg tcacattctt gacgtgtgta
    14401 gcgttcttgc tgatcaattg atttatctgt cgtcaaatga agttctgttt tgatgacatt
    14461 ccgatcaatc caatatggaa aatccttatg aaaatgtttt tccgcaccat catcaataaa
    14521 attattccaa ttccaaaaat gtaaataacg ctttttattt tctacaatat atggatcgga
    14581 aatagttgct ttataaatta tagaaagctc atttaagtct ttattatctt ccacaatttg
    14641 aatggatgta ttactaaaat gactatcaac ttcattttct tcatattttt tatataaagt
    14701 catattgcta taaatcgaaa aattatatcg attgataatg tctttattgg aatcattttt
    14761 aaacatttct cgtgacccgt ttgccattcc accgcgtaat tttctttcaa aagtaatttc
    14821 agccgcatta tctttaacat cgcagtaaac cacttcttcc acagatggaa tttcatcttg
    14881 aaatggctct tgtttttgca attccgtacc tgatttaatt tccaaataat acataaaact
    14941 atttttttga cgattagcca aaaatccttg atcactactc attgtagcat caataaaata
    15001 gacttgatta ttatgcgtta tttttaaaat cgcatggtta aagttgaatg gtgacggtgt
    15061 ataaactggt aggaatacat cactaccata gttaaccaaa ataagctctg aattcacgtc
    15121 taaataatct aaaatcactt tcaaaagaac tgttttcgcc ttacaatcgc cttgtttcgt
    15181 tttataagtc acttcagcag cttgaggttc atgaccatcc atctctgttt cattatataa
    15241 atagtatact tctttttgaa caaaatcgat ggcatgctta attttatggt ctaatgtcgg
    15301 taactcatct agttcagcca ctatatcagc cgcaaattca gcaaggttta cttgatagaa
    15361 tttttgataa atgtcactga ttgtttttgt aatttgcgga tacgactgct ccgtaacaaa
    15421 atcaacaaac ggtgtaattt caagttcttt tgcgtcttct ccaatataat cttctttttc
    15481 gattgtataa gattcgttat gttcaaccat aactttgtct ttttctaaga tggcgcctgc
    15541 ttcatctcgg aaataatgga aattcgcttc taattttttc tccgtttcat tttttaattc
    15601 aaaacggtat tttccataag cccagtagga atttggcgcg gaataaatcc agcggaaaaa
    15661 gtcattgcga atgctgcttt cttcatattt acgctcaatt gtcgtctcca caataaagat
    15721 atcatttaaa tgtaagtcac gaataagtac tgtcactttt ttctcatcat taaaactcgc
    15781 ttgattttca tcacgaacat agtcaagtac ttttacatta atgtcatcca atttatcaat
    15841 cactttacca tcacgaacaa cagataaagt gtgaatgtat aatacctctt cttctgataa
    15901 aataaaactc gtcttgccgg ctgaattgag catgttgggt tcatttaatg tatatgccat
    15961 cgaagtataa ctcgtgcgtg aatttggttt agccgtttct acaatattac accagaagca
    16021 gtaatcacgt tcttgcgcaa tttgtgcatc gtaaaaagtt ttatcttgtg tctttaacca
    16081 agaatcaatg ttttcttgtt ttgtttcagg agaacttaac tctggtttta taaaataata
    16141 ttcttttgtc attgtgtaat ctccttaagt gttttagata accttattct agcaataaat
    16201 aaatagaaca aacaaggcaa aatctttatg atataataac ttttggttta tctacactat
    16261 ttagtaaaaa aatcgacaca tttactactg aatttcatct atccacgaaa acaattgcac
    16321 atcttggtat gtctcaccaa ttttttcata atcccgcagt aaaccttcct tcgaaaaacc
    16381 aagcttttct aacaatgcaa tagaagcact atttcttggg tctacttttg cttcgattcg
    16441 gtgcaattca aatgattctt ttccccattc catcaacgct ctcactgctt ccgtcgcata
    16501 accccgtttc caaaagcgtg tacctagatc ataggcaatt tctgcccgat ggttttcatg
    16561 atcaatataa ttaaatccgc atgtaccaat gatttctcct gttacttgca aaataatcac
    16621 acaacgaagt gcctttcctt caatttctag ttgtcgtagc atccgaatca tttcttcaac
    16681 cggttgcaaa ctttggaaag gttcaatatt catgtatcta gtaacagaat catctgacca
    16741 gtaaccaaac aatatttcag tatcagctaa cgtcatttcg cttaaaaaaa gtcgttccgt
    16801 ttttatcatt tgcttccgat tttccatacg ttaacccccg cccttttaat aaaagaagct
    16861 tatcaaatct tactcgcaaa gtaaaatgtt tcacgtgaaa cattcgctcc ttctttatca
    16921 tcagagtttt taggtttata atggaaaata tctcaaaaag cttcaaaaaa ggagaatgat
    16981 tcatggaaca gacgaataaa cgtaatactt tagcacttat ttcaattatg cttggagctt
    17041 ttatttcatt attagataca acaattgtca acgttgcctt acctgatatc acaactgctc
    17101 tacatgccac gagtgaaacc atcgaatggg taatttcagg ctatgcgctt gcttttggac
    17161 ttgtacttat tttagctggt cgactcgggg ataaatttgg ccgaaaaaat atctacatta
    17221 tcgggattac gctatttcta attatgagtg tgacagctgg ttttgcagat tccgaaaata
    17281 gtctaattat ttcccgggta atacagggac ttgctgccgg attatttttc ccgcaaatca
    17341 atgccacaat tatggatatg tattctggaa aaagccttgg gaaaatcttc ggaattcttg
    17401 gatctgttat tggtgtggga actgccatcg gacctcttac aggaggtctt ttaattgaac
    17461 ttttcggaac tacaaatggt tggcgtgcag tttttttcgt taacgtacct tttgtgttag
    17521 taacgctagt cctagcaatg ctttatcttc ccaaaagaac tgtctccacg aaaaaaatta
    17581 gcttcgattt gcctggagtt gggctactaa ccattgcact tttactatta ctttttccac
    17641 ttatctcaaa cggcgcaaat gacttcaaac cgatagacta tcttttaatg gcgctatcta
    17701 ttccactctt tatcattctt tacaaatgga gcgtctacca agaaaagaaa ggaaatcagc
    17761 cattaattgc tcccaaccta cttaaaaata atcaatttgt ttcaggtatg cttttatcgc
    17821 ttgtatactt tgccgctttt actagtattt tcttcgtcct atcgctaact tggcaaactg
    17881 gtttcaatcg ttcggctatt ttatccgggc ttgcaattag tccttttgcg ttaggtagtg
    17941 tgttagctgc ctctaatagt taccgactaa tccctatatt aggtagaaag ctcttaatgc
    18001 ttggagttgc gcttgttatc atcgggcttg gcaccgtgtc tattgttttc catttgaacg
    18061 acggcgcttt ttctgcttgg ctcttattct tacctctttt catcgctggt atcggcagtg
    18121 gtttgactat tgcaccattg aatagtttca ccctttccac agtaactggt gtggatcgcg
    18181 gcggagctag tggtatgttt aatacagcgc agcgaattgg atcgtccttt gggattgctg
    18241 ttgttggctc agtcttcttc cgcacacttg gaaatactgc cgctacttca aaagcaagcg
    18301 ccttttccga cagtttgcaa atgagtatgt acgtcaatat tgttctgctc gttgtttgtt
    18361 tcctacttgt attccggtta ccgaaaaata tttaaaaaag agacatgact ttgcgttaaa
    18421 gtcatgtctc ttttcttatg ctaaatagaa aacttctttt aaatctaatg caaccgggct
    18481 gttattagga tttgatttca taattggagc catatatttc caccactttt gacaaatttc
    18541 tgtttctgct attttgtcat aaatggcttt atcctcgact tccacataag caaacaatgt
    18601 atccgtcttt tcatctagaa atatcgaata gttagctgct ccatgtgctt ttaaagcctc
    18661 tttcatttct ggccaaagtg cgtcgtgtct ttttttatat tcttcttgat taccaggata
    18721 taaatacata atagatgcca ctcgttccat tattgttacc tcctaattaa ttaaataacc
    18781 tgcctttgct tcaacgccaa atctttcacc cagtgctttc aattgttcat ctgtaatcgc
    18841 ttgtttaata ccgccttgtg acatcacaat agtataaact tctgctgctt tctccgcggt
    18901 ttcaattaat ccaaatgttt catccattga ttttcccgca ccataaatcc cgtgatgtgg
    18961 ccaaacgatt aaacgatttt ccttcatttt ttcagatgta gcttctccaa tttcattcgt
    19021 accaggaacc agccaaggaa taatcccaac accttctgga aaaacgacta aacattccgt
    19081 acacatttgc cataaagttc ttgtaaattc tcgttccgtt agctcatgtg taaatgtcat
    19141 cgcgagcaaa tgagtagcgt gacaatgcat aacaacgcgg ttttccggat ccacagaaag
    19201 tcttgcaatg tgactcataa aatgcgctgg aagttcactc gttggtagtc cgccgtctgt
    19261 atagccccac aacaaatgaa ctgctttccc gtcttcactc acttgaatta cacccaaatt
    19321 cacagctgga gcttcttcaa catttttaaa atatttaccc gaaccagtta ctaagaaata
    19381 cttgccagca agctttttac cgtcaaagtc cattggaatt gtgcgaatga tttgctttac
    19441 atctaaatat tccacaactt ctttttcatc caacaaataa gtgatattgc caccgtttct
    19501 ttcatcccag cctaaccggt ataaatttga agtagttttc gccatttcct taataaaaac
    19561 agcatccatt atatcctttg tcatcgtcac tatctcctat ctttttagta atacatcttc
    19621 ttcataagct tttacttctt tcaaccagtc aagaccaact ggaacaccat taatttcaca
    19681 gaagtagttc catacatcgc caaatgggaa gtcttttagt tcttctgtaa ttgccatacg
    19741 agatgtaaag tcattttcca gttccatttt tttcaaatca gctgtaggtt ctaaaagggc
    19801 tttaagtaat gatttttgcg tatttctagt tccaacaacc catgcagcaa tccgattgat
    19861 tgttgcgtcg aagaaatcaa gaccgatatt tgtaatccca agtaaatcat tgcgcaccaa
    19921 ttcgcgacca atttcaatta attcatcatc cataatcacc acatggtcac tatcccagcg
    19981 gactggacga ctcacatgta acattacgcc tttactgaaa agtgccaaag aagataattt
    20041 attagaaatg acttcagttg gatggaaatg tcccgcatcc aagcaaatca atttatcccg
    20101 cgtaattccg taacccatat aaaattcatg cgaaccgaca gtataagcct ctgcgcctaa
    20161 accaaacaac ttactttcta cagcttcttg ggtatatttt tcatctaatt tttctgcaaa
    20221 aacttcatct aaagcttcca tcaaacgttt tctcggggtg tagcgatcaa tcgggcaatc
    20281 ttttatacca tccggcaccc agaaattatt aatacttgtt tgaccaagtt ctttcccaaa
    20341 gtactcagaa attttgcgcg agcgtttccc gtgctctatc caaaaatcgc gaacttcttt
    20401 atctggtgac gctaaagtgt aattgtcttt aaacattgga tgtgaaaaga aagttgggtt
    20461 gaaatccaga cccaaaccct gctctttcgc ccactctacc catggagtga aatgcttagg
    20521 ttcaatttca tttaaatcta ctttttcatc tgtatctacg taaattgcat gtaagttaag
    20581 tttatgtttt ccaggaataa gtgaataagc tttttccaaa tcttggcgta attgcttagg
    20641 agtatgagcc gcacccggat aattcccggt cgccatgatt ccgcctgtaa gttcgccatc
    20701 tggatttaag aaacctttaa catcatcgcc ttgccagcag tgcatcgaaa ttttaatgtc
    20761 tttcagtgtt ttaagcgctt tttccgtatc aactccaatt gcttgataac gttctttcgc
    20821 cacttggtat cgtttactaa tttctgtttc ttgtcccatt ctaaaagcct cctaattaaa
    20881 ttcaagtacc ttagtaaatc tttcttttat ttcctcaaat ctcacatcac cacaagaaaa
    20941 ttcgccaatt tcaaatgaat ttcgaataat ttttcttccc gcacgcatag attcgatttc
    21001 accttgatta atcatttgta caactaaatt tccaatcgcc gttgcttcag aaggtcccgc
    21061 aaatacttct atccctgcaa gtttagctgt taattgattt agcatagcta cattacttcc
    21121 tccaccaaca atataaagtt tttcgatttt cttaccagta atttcagtca ttttctccaa
    21181 ttctagtgca taatagagtg ccagacttcc atacacacaa tttgtcagtt ctccaatcgt
    21241 ctccggtata gtttgtccag tttcttggca atacaattta atctcatcca ccatgttttc
    21301 cgggttatta aacctggcat cattgacatt aataatttgc ttgaaataag gataattact
    21361 cgcttcctca gccatctcag caaaactatg cttgtagtcg tccatgcgcg caatttcttg
    21421 aacaatccaa agccccataa tattttttaa aaagcgataa gttccatatg cgccccattc
    21481 attcgtgtaa ttttctttaa aagctgcttc gttattaatt ggcgcactta gctccatccc
    21541 tattagcgac caagtcccac tactcaagaa tgcccaattt tctccttctg ccggagttcc
    21601 caccactgcc gaagctgtat catgtgttgc cactgtcact acatcacaat taggaatatc
    21661 atactcctct agccactcct cttttacttt acctaaatac gtacctgcat ccgtcagtgg
    21721 cgcaaatttt tccacatcaa tgttcaaatg cgaaagtaaa tccttatcaa ataattgttc
    21781 tcgcaagtta agcatttgtg tagtcgatga atttgttgtt tctgccacct taacccccgt
    21841 gagaacataa ccaatatagt caggaatcaa caaaattttc tccgctcgtt ctagtaaatc
    21901 tcgctcttcc acgtacagct gatatagagt atttaattcc ataaactgaa tacctgtttt
    21961 tttataaata tattctcgtg gatactcact cgttaaattc tgcaccgcat ttaaagttcg
    22021 tttatcgcgg taactaattg gatctgccaa cttctcaccg gaagccccta tcaaaacata
    22081 gtcaacgccc cacgtgtcaa taccaagcac acattccgaa attcctagtt gctttacttt
    22141 ttccaagcca ataaagattt cctgcatcag ttgatcaatt tcccagcgtt cgtgcccatc
    22201 tcggtacgta aaaccatttt taaaacggtg aatttcttct aattgtaatt tttcattcac
    22261 caatttccct agaattaatc gaccacttga tgcaccaata tctactgcaa cataatgttt
    22321 cactggtcta gctccttttc tttaatcaat tgtatttccg taacgttcct tcgtaatatc
    22381 atcaagtgat ctgccacgtg ttttcggcgc ccaaattaca ccgattaaaa gcgacactgt
    22441 aagtaaacca atcataattg tccccgccac agtaaagcca agatttgcca agattactgg
    22501 gaacacaatc gaccagacac ctgtactacc acgaactaag aaaaacatca cgccttgaac
    22561 cccaccacga tattttgttg gaaaaagttc tgttgaccaa agtgcgtaaa aagcttgtgc
    22621 accaatccct gctgaaatac cccataaaat aacaaatgtc cataagccaa cccaagacat
    22681 tccaacaaaa gtaagtacaa cccaagaagc aactgccatt aaagccccta caaaaaacaa
    22741 tccacgatga cttactcgat caccaaattt agcaaagcca aagtatgtag aagctgctgt
    22801 gagtatccat aatacagctt gcaataaatt cgcttgtgta ttagaaagac cacccaccgt
    22861 ttcatataca aacggcataa aaaatcccat tgcacccgct actaaattcc aaaataagta
    22921 cacacccact aagaaaagta ctgattttac atttaccata ctagaaaatg ctgttttaaa
    22981 agggtgttcc aaacgattac cactttcttt cattttcact tgctccgctt cccagtcctt
    23041 cgactcctct aatttacgtt gtaactgcca agcaacaaac gctacaatca ataaagataa
    23101 gaaaagtaag cggttaccta aaagtccaag tggagataca ataattccta aagtaaagat
    23161 aattgctggc ccacatgacc aagcaaattg agatatacca atatttctag ctcttatact
    23221 aggatccgcc atttcagaaa tatatgtcca tgaagccgga accccagccc caacagaaag
    23281 acctgtaact aaaaatccaa ttaatagcat tgggaaattc attgcaaaca taatgattgt
    23341 aaccccaagc atatacacca acatgttata cgtataaata aatttccgtc catatttatc
    23401 tgctaaatga ccaccaataa gtgcgccaat tgcagaacca aacgcattcg cgctcacagc
    23461 cccaagtaat cccaccgcaa aactgctaag tccgaattgt gttgcccaca aagttagtcc
    23521 acttgctccc gctacaatac atccagaatc taaatagttc gtcaaagata ccgctatcgt
    23581 tcctttttta cttgtactcg atccagccat tcttttaacc ctcctactta ttttagttaa
    23641 gcgcttactt tatattaaac aattaatgat tgcgctttac aatatcctgt gtttataatt
    23701 aaagtatcaa atttacagaa ggagattgtg aaatggaagc gcttaataaa aaattatttc
    23761 gtctaaattc aaaagaaaaa atccaaaaaa gcactggcac ttttgttccc gatttaccca
    23821 atggatcctt tttaaaagag aacggcagca tggaattatt aaatgattat ttcttcaaaa
    23881 acaaagacat ttatataagc aaacacaacc gatttgcgga ctatccttat catacacacc
    23941 aatttcttga gctaaattac atgtattcag gaagctccga acaagtcatt gaaggaaata
    24001 aagaaacttt gcatgaagga gaacttttac ttttagacag tggctgccat cattccatca
    24061 aagcaacagg cgaaaaagac attctcatca acatcctttt ccgtgaccaa caaatcagcc
    24121 tagaatggct aacgagtata aagaaaaaaa acagccttct attcgacttt cttcttcatt
    24181 ccagcgtaag cgagcaatct ttaaagaaat atattatttt tcaaagtgcg caaattccgc
    24241 atatccaaca aattttaaac caaattatca cagaatattt tttagaagaa gaattttcat
    24301 caagaattat cactctttat ttgccaattc tgttcactga actggtacgt aaatgtgata
    24361 catatttagc tgatgatctt accaactcac aatcaagcac cacttccacc atgctcgaag
    24421 ttattaagct tatagaatcc aactatcgga caatcacatt aacaagtgcc gcggatacat
    24481 taggttacaa taaaaattac ctcagtaact ttattaaaaa aaataccaat ttcactttta
    24541 ccgaactagt caataaacaa aaaatgctcg cagcaaatct tttaatcgaa accacttcca
    24601 ctccaattga gttgattatt gaaaaagttg gctttagtaa caagacttac ttctactcct
    24661 tatacaaaaa aacattcaat ctcttaccca atgaagtaag aaataaaaaa taagagtact
    24721 gcattaatcg cagtactctt ctattgtttc acgtgaaaca ttctatttat aaacaacctc
    24781 aaactcttca caaaccacta gagcatcttc ttcaaatgga ataccgagtt ccacacattc
    24841 attactgaaa aaggatgtat gtacttctcg ccaatattct agcgttctgt caccttctcc
    24901 ttccaaataa gcaaacgttt caggtacttc attaaaaggc ataatagtta cacctgttaa
    24961 cttgataatc cccattgctt cttcattacc atctaaaagc actacatgag aaccaacaga
    25021 cggcatcgtt tctccgcctt gatcatacca ataaaacaag ctgctcgtgc cggtttttat
    25081 cccatccata acaagcccac caagctcatt cgccatctga ttagagttac caaatgccca
    25141 tgcctcaaac ttacttgaaa tcatcgggta ttctgtccgg tatttctccc acatttcatg
    25201 cactgaatcc ttataaatcg ccatttaagt atcctcctaa aaaaagactg aggttcgtta
    25261 aaacctcagt ctaagaattt atttgcgaac tggcttaatc acaatataac ggtaaggatc
    25321 gcgtccttca gaatgcgttt caatttgttc attctcgctt aaaatagcat gaataatttt
    25381 tctttcaaat gaaggcattg gttctaaatg aacagcgcgc ttcgttttaa gagctttatc
    25441 tgccatttta tttgctaaaa ttactaacgt ttcatgacgt ctttcacgat aatcccctac
    25501 attaacaata atatttttgt attggctcgt tgttttatta gcaattaatt gtgttaagta
    25561 ttgaagtgca ttaagggttt gaccgtgttt gccaattagc atacctagac tgtcaccttt
    25621 aatttgcaac ttcacatctt taccaacttc ttctacatcg attgtgatta ctgcacccat
    25681 cttggtagca acatctaaaa gataatcaat cgctacttgg ataccatctt ctttttcaat
    25741 tacttttacc atagccagtc ttgaaccaat tccgaaaata ccttttttac cttcatctag
    25801 aacttctact tcgaccttgt cgcgtgttgt ttctaaagtg gctaatgcat tttggatagc
    25861 ttcttcaacg tttgagcctt gcgcagttat atctctcact ttcttttctt acctcctttt
    25921 ttggaagcct tcatgttagc tgcttttttc ttcaaacgat cttccgcaac ttgagcagca
    25981 gcaagcgcct cctgttcgcg tttgttttta aaaggattat taattaaaag tgtttggaat
    26041 acggtgaaaa tgttaccgat aatccagtat agagcaaggg cagacggtag tgtaataccc
    26101 ataaatagaa tcattacagg catgatataa acaatcattg ccattgattt attttgctgt
    26161 gtttgcccca tcatagaaat ttttgatgac aagaatgttg ttaatgccgc aacaaccggt
    26221 aagatgtaat atggatctgg atttcccagt tgcatccata agaatgaatc tgttttgatt
    26281 tctgctgttc tactaatcgc ttggtaaaaa cctagtagaa taggcatttg gattaataat
    26341 ggtaaacaac ccatcattgg atttacgcta ttttcttgat atagacgcat tgtttcttgt
    26401 tgtagttttt gttttgtttc attatcttta gacgagtatt tctcttgtag ttctttgatt
    26461 ttcggttgta aattggtcat ggccttttgg cttttcagct gtttgatcat taaaggcatg
    26521 ataagtagac ggattaaaat ggtaacaaca ataattccga ctgcgtaact tcccccgaat
    26581 aaatcggaaa accaagtaat agtccaggac aatggaaata caatatagtg actccaaaat
    26641 ccagttgatt ctgatgtaat tggatcagtt gaatagccac aacccgaaag tacagccatt
    26701 aatccgatta caagacttgc gatgagcaac ttctgtttga atcgcttttt cttcttcaaa
    26761 ttgatgtaac ctccaatttc gcctttttaa aatttccact cactttgaat tgtttggttt
    26821 ttgctttaaa acacgcccca cttttaaaac atgaatcaaa cttttcttta cctcatgaaa
    26881 atccatattg gccgccggtt ttctggcgat gataatatat tcattttcag gattgatttg
    26941 gctttctaat tcatggaatg attgtcttat gtaacgttta attcgatttc gacagacagc
    27001 gtttccaatt tttttactaa ctgataaacc aattcgaaaa tgattcgatc cttcttgctt
    27061 taaagtataa acaacaaatt gacggttagc aaaagatttt cctcttcgga atactttttg
    27121 aaaatcgtca ttttttttaa ttctatattt ttttttcata cattctccat cttcttacat
    27181 atcttagtat aaggccgttt gcctcagcga tttttcaaaa aaaaaaccac tgagtcgttt
    27241 tcagtggtct acgcagataa aacttttctt cctttacgac gacgacttgc taaaactcta
    27301 cgtccgtttt tagtactcat acgcgtacgg aaaccatgca ctttttttct tttacgttta
    27361 cttggttgat atgttctttt cattaattac acctcccatg aaagggtcca atcgaattta
    27421 tctattagac agtcttagat attgtacgtg aactggtctt ttttgtcaat actatttaga
    27481 cgaatttcta tttagactcc gttcactatc atatcatatt tttatagaga gaaaaaccat
    27541 ttttcgaaaa ttat
//
LOCUS       DASDYO010000022        27013 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.022, whole genome shotgun sequence.
ACCESSION   DASDYO010000022 DASDYO010000000
VERSION     DASDYO010000022.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 27013)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 27013)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..27013
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.022"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            15..1229
                     /locus_tag="U0290_000839"
     CDS             15..1229
                     /locus_tag="U0290_000839"
                     /EC_number="6.3.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate synthase"
                     /protein_id="HEM2300886.1"
                     /translation="MAKEKIVLAYSGGLDTSVAIQWLVESGYEVIACCLDVGEGKNLD
                     FIKEKAITVGASESYTIDAKEEFAEDFALIALQAHAYYEGKYPLISALSRPLIAKKLV
                     EVARQEGASAIAHGCTGKGNDQVRFEVAIHALAPDLKVVSPVRDWKWSREEEINYAKE
                     HNIPVPIDLDNPFSIDQNLWGRSNECGVLENPWTTPPEAAYDLTVSLEDAPDTPDIVE
                     ITFDAGIPISLNGENMSLANLILTLNEIAGKHGVGRIDHIENRLVGIKSREVYECPAA
                     VTLITAHKELEDLTFVREVAHFKPIIEQKISETIYNGLWFSPLTEALVAFLKSTQKFV
                     NGTIRVKLFKGHAIVEGRKSPNSLYDENLATYTSSDTFDQDAAVGFIKLWGLPTKVSA
                     EVNSKVTITTEV"
     gene            1233..2603
                     /gene="argH"
                     /locus_tag="U0290_000840"
     CDS             1233..2603
                     /gene="argH"
                     /locus_tag="U0290_000840"
                     /EC_number="4.3.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465615.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="argininosuccinate lyase"
                     /protein_id="HEM2300887.1"
                     /translation="MEKLWGGRFQGKSEAWIDDFGASISFDQKMAKEDLAGSLAHVAM
                     LSKCGIIPASEAAEITAGLKILQEKLALGELEFSTVNEDIHLNIEKLLHEEIGPVAGK
                     LHTARSRNDQVATDMHLYLKQAVAEIIQSLKHLRVVLVQKAEANVETIMPGYTHLQHA
                     QPISFAHHLLAYFGMFTRDLERLEESVKRIDISPLGSAALAGTTFPIDRAYSAELLGF
                     SAIYENSLDGVSDRDFIIEFLSNSSILMMHLSRFCEELILWTSHEFQFVELTDAFSTG
                     SSIMPQKKNPDMAELIRGKTGRVYGNLFGMLTVLKGLPLAYNKDLQEDKEGMFDTLET
                     VQTSLDIFAGMIETMKINTEIMEESTQKDFSNATELADYLAKKGVPFREAHEIVGKLV
                     LECTQNGIYLQDVALSHYQEINPLIDDDIYVVLSSKTAVQKRNSYGGTGFDQIKVALE
                     NAKKTL"
     gene            2771..4294
                     /gene="betL"
                     /locus_tag="U0290_000841"
     CDS             2771..4294
                     /gene="betL"
                     /locus_tag="U0290_000841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465616.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BCCT family glycine betaine transporter BetL"
                     /protein_id="HEM2300888.1"
                     /translation="MKKLTSVFWGSGCLVLLAVLFGAFLPKQFEAFTTNIQKFLTSNF
                     GWYYLIVVAIIIIFCLFLVLSPIGSIRLGKPGEEPGYSNKSWFAMLFSAGMGIGLVFW
                     GAAEPLSHYAVQAPGGEVGTQAAMKDALRYSFFHWGISAWSIYAIVALALAYFKFRKN
                     APGLISATLYPILGKHAKGPIGQLIDIIAVFATVIGVATTLGLGAQQINGGLTYLFGV
                     PNNFTVQFTIIIIVTILFMLSAMSGLDKGIQLLSNVNIYVAGVLLVLTLILGPTLFIM
                     NNFTNSFGDYLQNIIQMSFQTAPDAPDARKWIDSWTIFYWAWWLSWSPFVGIFIARIS
                     RGRTIRQFLLGVIVLPALVSVFWFAVFGGSAIFVEQHGNSGLSSLATEQVLFGVFNEF
                     PAGMVLSIVAMILIAVFFITSADSATFVLGMQTTGGSLNPPNSVKVTWGLLQAGIASV
                     LLYAGGLTALQNASIIAAFPFSIVIILMIVSLFVSLTREQEKLGLYVRPKKSQRSQL"
     gene            complement(4338..4535)
                     /locus_tag="U0290_000842"
     CDS             complement(4338..4535)
                     /locus_tag="U0290_000842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2300889.1"
                     /translation="MEKFLFNATLFASALLLMVGIFKSSIPITAISLVLAVVSQHFFR
                     KKYPKQTRSYREIVAAKQKKG"
     gene            complement(4539..5189)
                     /locus_tag="U0290_000843"
     CDS             complement(4539..5189)
                     /locus_tag="U0290_000843"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II aldolase/adducin family protein"
                     /protein_id="HEM2300890.1"
                     /translation="MLYQKEREDLAKIVKTMFDRFETNAAGGNVSVRMNSEHIIMTPT
                     LMSQAKLCDLSPYEILVVDNNNEVVEGDGRVTREINLHRACYVENPKIGCVLHAHPKE
                     SMLFATLGMELPNLTEATQKIGQIPTLEFAPATSPELAEIVRKHVIELGDKAVPSASL
                     LNKHGIVVLDTSLHKAYDMLERIEYNAYIAEKALVFDALGIKKLAHDRELNYNLEE"
     gene            complement(5191..6123)
                     /locus_tag="U0290_000844"
     CDS             complement(5191..6123)
                     /locus_tag="U0290_000844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-phosphofructokinase family hexose kinase"
                     /protein_id="HEM2300891.1"
                     /translation="MIYTITLNPAIDRLLFIQGELEKRKTNRVKKTEFDCGGKGLHVS
                     GVLSKFGIKNEALGIAGSDNLDKLYAILKEKHINHDFLVEAGTSTRECFVVLSDDTNG
                     STMIPEAGFTVSQTNKDNLLKQIAKKVKKEDMVVIAGSPPPHYTLSDFKELLRTVKAT
                     GAFLGCDNSGEYLNLAVEMGVDFIKPNEDEVIAILDETTNSLEENVRKLAGKIPYLVV
                     SLGAKGSLCAHNGKLYQVIPPKVQERNDTGAGDVFVGAFIAGLAMNMPITETLKVATG
                     CSASKVMQQDSSSFDLEAAGKLKNQVSIIQLEER"
     gene            complement(6141..7490)
                     /locus_tag="U0290_000845"
     CDS             complement(6141..7490)
                     /locus_tag="U0290_000845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HEM2300892.1"
                     /translation="MESLQSVIQFILNLGAAVFVPALMIIIGLIVRMKVRDAVSAGII
                     LGVAFLGMNIVIGFMIEALTPAAQGLAERTGINLSILDGGWTSMATLAWAWPFAFLMF
                     PLQLGINAIMLVINKTKTLNVDLWNVWGKILTAVLIIGVTQNVYLAFIVAGIQIVTEL
                     ILCDANQRQIQELNGIPGVTVSHGMMIFCIFLMPLDWLLKKIPALRKDMDANALKDKI
                     GIFAENHVMGFIIGGLLGIAAGYDVAKTLMLAMQAAAALTLFPMVAKLFMQALSPLSD
                     GISEFMKRKFKNRELFIGLDWPILAGCSEVWVAIVLMVPVTLIFALILPGNGVLPFAG
                     ILNISLCAPALIVTGGNLIRMIILGTITTPIFLYVSTFFAGTITDLAHSTGAISLKAG
                     QQITWSTLEYPVFRYIFAEASQFTILGFIFVAIWVVLLVFYVKMMKKRTIELEKASS"
     gene            complement(7518..7793)
                     /locus_tag="U0290_000846"
     CDS             complement(7518..7793)
                     /locus_tag="U0290_000846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2300893.1"
                     /translation="MKKVIVACGSGVATSQTVASKVERILKEKGVRATVEAVDIKSLE
                     QHIKTSDVYVAITKANKEFDIPTLNGIAFLTGMGMDEETEKLLNALK"
     gene            complement(7799..8266)
                     /locus_tag="U0290_000847"
     CDS             complement(7799..8266)
                     /locus_tag="U0290_000847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2300894.1"
                     /translation="MDYHDLFQKELTLINSRYENQAELFEYTSKILEKEQYVEPTFRE
                     AVTSREVVFPTGLEMNGIKIAIPHTDTIYVKRPFVLVNKLSTPIPFIQMGTTDKWIDV
                     EVIFMLGIKNPQDQVPLLSSIMEKFMEADFVEQIKTINDSNTLCDFLKKQFGE"
     gene            complement(8274..10280)
                     /locus_tag="U0290_000848"
     CDS             complement(8274..10280)
                     /locus_tag="U0290_000848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2300895.1"
                     /translation="MEQNCKELITYLLLNRQVNLRNVSKNFKVSKEAISAQITQINHL
                     LKSEPILIDHDMIFVTDVCREACYRLLTAEEQQLFSFYEVNIRRKLIMIKLLLHNHYM
                     SLGALADYVYVSKNTMLTDVKSIKESLHEFEIQLDYSRRDGYAVSGSEFLIRNLLAEL
                     IREVVQTPYGKFVLDEKKLITVSEVFLLKKRLEKVESKLQITFTDEQMEELPYILHGI
                     IKRSKVTNKKWTFKIEMYDIKNTREFPIMKEMFWGYDFLSENDLLYLSLQVLASNLVE
                     SALHFSDSEEIAYAVDEFIRLLEMYFATEIMKKNEFKEKVILHVRPAIYRTILGFQIN
                     NPLKKQFIKEYTPTFNIVEKASKPFEKLVGHKWSEEEIVYLSMIVLGWMYQIEETEQP
                     IFRAVVLCKSGTSISKLLLENLKMMFPNIDFQGAYAVRQLSTVARDIDFIFTTVPVQS
                     DATIFVIPSILSKDSRQILREQVDKAIEMDSHKKTKELLAMLKDEIPEENIRLVQAKM
                     ESFFNKKEQPMEKKEPEQMQITEEQVHFLETPLEWEQLVSVAFAPMLERGTVDASYIH
                     TCEEIFYQNYEQMMIGPNIYLPHAKPANGVIEQDIQLMIMKADTKTPENEAVKIMIAL
                     APSEQNKHIPLLLKLNEIFLKPEKLAGILASTNKKKIVEILERG"
     gene            complement(10461..11906)
                     /locus_tag="U0290_000849"
     CDS             complement(10461..11906)
                     /locus_tag="U0290_000849"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PLP-dependent aminotransferase family protein"
                     /protein_id="HEM2300896.1"
                     /translation="MWKLAGNSNLPIYLQIVDLIETKIINGELLPEEKLPPERQLAEM
                     FGVNRSTVVRALDELTARAVIIRKQGSGTTVNAEKWGLFAGQSTNWRHYLTQGGFTPA
                     VPYIRQAGVMERADSDQVIDAASGELPLEMTPKMETPSLSWQSFIAEEQQEDEAGYKP
                     LRETIQKQMKEAYGLQTRPEQIFITSGAQQALFLITQCLLKPGDAVAIESPSYFYSLS
                     LFQSAGLRIFALPMDEDGVIISELRDLYHKHRVKMVFVNPTFQNPTGLVMSLERRKEL
                     VKICAHLQIPIVEDDPFSELAALDSQVPAPLKQLDTDNVLYIGSLSKIMGSTTRIGWL
                     IGPTAVIERLALARQEMDFGLSIFPQVLANSVLNTPGYKVHLQQLHHVLKQRRDDLIE
                     AFEAILPNDVVFIKPKGGFHLWVKLPVEFRSIRDFDIFLANDLLVMPGFLFGVKEAVI
                     RVTYARLEKTEARRIAEIIKQILIEKKCEEA"
     gene            12030..12917
                     /gene="pdxS"
                     /locus_tag="U0290_000850"
     CDS             12030..12917
                     /gene="pdxS"
                     /locus_tag="U0290_000850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase lyase subunit
                     PdxS"
                     /protein_id="HEM2300897.1"
                     /translation="MEKKVGTDRVKRGMAQMQKGGVIMDVVNAEQAKIAEEAGAVAVM
                     ALERVPSDIRAAGGVARMADPRIVEEVMNAVSIPVMAKARIGHITEARVLEAMGVDYI
                     DESEVLTPADDEFHLLKSDFTVPFVCGCRDIGEALRRIGEGAAMLRTKGEPGTGNIVE
                     AVRHMRQVNGQIRQIAGMTDDELMVAAKNFGAPYELIKEIKTLGKLPVVNFAAGGVAT
                     PADAALMMELGADGVFVGSGIFKSDNPAKFASAIVQATTYYTDYELIGKLSKELGSPM
                     KGIEMSRLNPEDRMQDRSI"
     gene            12919..13485
                     /gene="pdxT"
                     /locus_tag="U0290_000851"
     CDS             12919..13485
                     /gene="pdxT"
                     /locus_tag="U0290_000851"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465626.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal 5'-phosphate synthase glutaminase
                     subunit PdxT"
                     /protein_id="HEM2300898.1"
                     /translation="MKKIGVLAIQGAVDEHIQMIESAGALAFKVKHSSDLDGLDGLVL
                     PGGESTTMRKIMKRYDLMEPIRAFASEGKAIFGTCAGLVLLSKEIEGGEESLGLIEAT
                     AIRNGFGRQKESFEAELNIEAFGEPAFEAIFIRAPYLIEPSNEVAVLATVENRIVAAK
                     QANILVTAFHPELTNDNRWMNYFLEKMV"
     gene            complement(13524..14501)
                     /gene="pta"
                     /locus_tag="U0290_000852"
     CDS             complement(13524..14501)
                     /gene="pta"
                     /locus_tag="U0290_000852"
                     /EC_number="2.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate acetyltransferase"
                     /protein_id="HEM2300899.1"
                     /translation="MSDLFTTIKGQVTGKNVRIVLPEGTDERIVGAAARLQKENIVKP
                     ILLGNKAEIEAKAKEIGVSVEGIAIHEPATDPLFDELVAAFVERRKGKATEEAARKML
                     VDPNYFGTMLVYTGKAEGLVSGAAHSTGDTVRPALQIIKTKPGVSKVAGAMIMVRGEE
                     RYLFSDVAINIAPVAADLAENAIVSAETAEIFGIDPRVAMLSFSTKGSAKSDETEKVV
                     EATALAKEKAPELTLDGEFQFDAAFVPTVAEKKAPGSVIKGDANVFIFPSLEAGNIGY
                     KIAQRLGNFEAVGPILQGLNAPVNDLSRGCNTDDVYNLTLITAAQAVNK"
     gene            14821..15048
                     /locus_tag="U0290_000853"
     CDS             14821..15048
                     /locus_tag="U0290_000853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein A"
                     /protein_id="HEM2300900.1"
                     /translation="MQLNETAVGEKVRISELKIENAMLKRRLLALGCDEGCDICIKQK
                     GLFGGPCTFETKGQYISIRQCDACAIMVERR"
     gene            15045..17039
                     /gene="feoB"
                     /locus_tag="U0290_000854"
     CDS             15045..17039
                     /gene="feoB"
                     /locus_tag="U0290_000854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrous iron transport protein B"
                     /protein_id="HEM2300901.1"
                     /translation="MSQNTYCLLGNPNTGKTSLFNALTGSYEYVGNWSGVTVEKKVGT
                     LRSKTGKLIDLPGIYDLNPISRDETVVTRFLLEEKFDCMLNIVDSSQIERNLNLTIQL
                     LEFGAPVVMGLNMIDVAAGRGIHLNIQNLAKQLRIPILPVVARSGKGTDDILSTLSEK
                     HVAPAIPLILPYGEPAEKAITEIQALIKDMIPAKQSRWLAVQFLSKNEVTEEFLATCP
                     ALEQLKHIRTELEIALDGKLENHFHQVRVNYIHDICLTSVEYTRHSDIPLSDKLDKIF
                     THKFFGIPIFLGIMWLIFQITFTWVGAPLSDLLDGFIGGPLTDSVTSFLTAIGASGFI
                     TDLVADGIIAGVGGVLVFVPQILVIFFFISVLEDSGYMARIAVVMDRVMEIFGLNGKA
                     FIPMIIGFGCNVPGIMAARSIEESKERTLTILVSPFMSCSARLPVYALFVGVFFEKHQ
                     ALVVLSLYVIGILMALIVTKILSKTLLKKDNSVFVVELPPYRLPSLKTLWRSTWEKGK
                     GFLRKAGTFIFAGSVIIWLLNYAGPSGLDVPMGESFLAIIGGMLAPLLVPLGFGTWQA
                     GATLIPGFLAKEVVVSTMAIIYAVGESSLGSIVSTFYTPLSAYCFMLFILLYIPCLAT
                     VAAIRKETSSWKWTAFAVAYPLVTAYVLVFLVYQIGSLFV"
     gene            17046..17228
                     /locus_tag="U0290_000855"
     CDS             17046..17228
                     /locus_tag="U0290_000855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FeoB-associated Cys-rich membrane protein"
                     /protein_id="HEM2300902.1"
                     /translation="MFFVSIMVNLLLGGAIFGYTIYAIIKFIKRSKQGKCGGCELEKA
                     CNCESDEHTNLDHIFK"
     gene            complement(17258..18112)
                     /locus_tag="U0290_000856"
     CDS             complement(17258..18112)
                     /locus_tag="U0290_000856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009929107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM2300903.1"
                     /translation="MALKIKWIIAISMIIVLLVVGWFLGTRLTVKKYEVSSAKIEKEI
                     KLVQLSDLHFSEFGDKNENLLHKVANLNPDVIAITGDLFDRQGDSVPKELIKKLTKIA
                     PVYFSPGNHEYDVKNAYEDDYKPFLEKIGVVNLEDQTATIDVGGQKFQMSGLRSSANL
                     DYDYPYYKEGLAEIKKQQDSTYYQILLSHMPDYFELYVENGFDLTLSGHTHGGIVRIP
                     YTNIGAIAPGPQRTLLPDYVYGEHSKDGKTMIISAGLGAGSLHQKAFPRLGNPYEIVA
                     VTIKPATN"
     gene            18365..19126
                     /locus_tag="U0290_000857"
     CDS             18365..19126
                     /locus_tag="U0290_000857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2300904.1"
                     /translation="MNQKERIVEELKLLENKKTISQEELMQIFSISKDTARRDILKLV
                     ESGLAERYPGGVSLPVLKPQIESYTSRLVKQSEQKKKIAYAAGKVIKDHMTIYLDVST
                     TVHFLASNLEQHDLVVVTNSMDNAIAASQKEANKVYLLGGFFNFHSRVLSGEPVLGQL
                     QQFNFDVAFIGGAGLTEDGIFYSELTDVYMKQEIIRNSEKVFLLIDSTKVNKKTASKI
                     DFSGIDAVITDQPLPKDLMQCLISKEVEVISLKGL"
     gene            19132..20265
                     /gene="nagA"
                     /locus_tag="U0290_000858"
     CDS             19132..20265
                     /gene="nagA"
                     /locus_tag="U0290_000858"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HEM2300905.1"
                     /translation="MAVIKNVKIYKENELIDAAVITEGNLIKEVCSTTPEKYSDEPTF
                     DGNGQLLIPGMIDVHIHGANNYDMMDGSTESIQAVSMACAETGCTSFLVTSVSSSFED
                     LIQMIKQTKKVIGKEKGAKIAGIHLEGPYLNIEKKGMQNPAYLRHPDLKEMKKIFDEA
                     DGLIKMVTIAPELPRGIELIDFLKKRGVVVAIAHSNATYEEAQNAFEQGATHITHCFN
                     AMPAIHHRAPGLVTAALENDSVSVQTIVDGVHLHPGIVRLIHKIKGPDKMVLTTDALQ
                     AMGVGDGEYIFGGHQVTVKEGIARLKDGTLASSTVTMNKSLKLSNEFGIHLQDAIQMA
                     ASTPADILGMNNFGRIEKGYVADLVLLDKNFEVLTTWIDGEIY"
     gene            20307..21116
                     /locus_tag="U0290_000859"
     CDS             20307..21116
                     /locus_tag="U0290_000859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2300906.1"
                     /translation="MPLFKHEGTYFNYEIQGEGIPFLFLHGLGDNLKFAYETFDKDEK
                     IQLISLDQRGHGKSGNDSRKLSYDRLAKDALALMDYLGIQHFFVGGLSMGAGVAVNLA
                     VQAADKVLGLIILRSSATDEPMKKEVIAWFSTVSKYLPKKDGALLLEQDPIFPSIKET
                     YPKAIDTFKRYFEDDAAVTHYKKFSDIPKDRPIKNKSELTNLTIPTLILANNYDVIHP
                     IEYSLFYKRNIENASYYELTPKTIDAEKHKLEITTYINTFIINTSKKTNYK"
     gene            complement(21222..22178)
                     /gene="manA"
                     /locus_tag="U0290_000860"
     CDS             complement(21222..22178)
                     /gene="manA"
                     /locus_tag="U0290_000860"
                     /EC_number="5.3.1.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465634.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase, class I"
                     /protein_id="HEM2300907.1"
                     /translation="MTEALFLNPVFQDRIWGGTKLHDYFGYDIPSDTTGEDWAISAHP
                     NGPSVIKNGEYKGKTLAELWQENPALFGNPKEAVFPLLTKILDANTDLSVQVHPNDEY
                     AKVHENGELGKTECWYIIDCAPGAELIYGHKAASKEEFATWAKNGEWDKLLRKVAIKP
                     GEFYYVPSGTIHALGTGTLVLETQQSSDTTYRVYDYDRKDAEGNLRELHLDKAIDVTT
                     APHVDAKLDIKTETRGGLTETTFVSNDFFSVYKWEVDGAAEFMAKAPYTLVSVLDGEA
                     VLTIDGTKQSIKKGDHFVLPNDVKSWEIDGKMTAIVSNPPVK"
     gene            complement(22258..22989)
                     /locus_tag="U0290_000861"
     CDS             complement(22258..22989)
                     /locus_tag="U0290_000861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HEM2300908.1"
                     /translation="MNDVLTLLRNHRSFRKYKKGVEIPEGNLDAIIRAAQAAPSWING
                     QHYSIIAIKDQERKNKMAELCGNQPYIAECSVFLCFVADFHRVKVASDMHGKSFQIAG
                     EEDLLMVAATDIGLCMQNALTAAESLDYGTICIGGLRRNITATAEFLNLPEFVMPVVG
                     LCIGVPDVEAPVKPRLPKEAVYFEETYQTDVMPLLEAYDQEIIPFSEREGFVSYTERL
                     AKFYDRPYYPNLTEQIKERGFLGGK"
     gene            23141..23371
                     /locus_tag="U0290_000862"
     CDS             23141..23371
                     /locus_tag="U0290_000862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2300909.1"
                     /translation="MRQQQIDFKWLEENFLTANEAATYLGISKQALLSLAKRDVLPFT
                     KKGNMVLFHRMDIELRLENQQSLREKYRPFET"
     gene            23455..24210
                     /locus_tag="U0290_000863"
     CDS             23455..24210
                     /locus_tag="U0290_000863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme-dependent peroxidase"
                     /protein_id="HEM2300910.1"
                     /translation="MNEAVKTLDGWFCLHDFRSIDWAAWRELNPGNQELMLNELSHFL
                     SDMEITKNIGEGEHTIYSILGQKADLVFFTLRDSLEALNEVENRFNKLAIADYLLPTY
                     SYISVVELSNYLASHMAGGEDPYQNKGVRARLYPALPPKKHICFYPMSKKRDGADNWY
                     MLPMEERQQLIRDHGLIGRSYAGKVQQIIGGSIGFDDYEWGVTLFSDDALEFKRIVTE
                     MRFDEASARYAEFGSFFIGNLLPSEQLSKLFTI"
     gene            24406..25173
                     /locus_tag="U0290_000864"
     CDS             24406..25173
                     /locus_tag="U0290_000864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300911.1"
                     /translation="METVLQAKNVRKIYGSKGNVYTALENISIDIKEGEFTGIMGPSG
                     AGKSTLLNVLSTIDKPTSGQIVISGQELENMNEQQMSTFRRDKLGFIFQDYNLLDTLT
                     IRENIILPLALAKRPVKEMEEKLAIISEKFGITEILDKYPSEISGGQKQRTAASRAII
                     TAPSLIFADEPTGALDSKSATNLLESLRDLNEQDKSTIMMVTHDAFAASFCKRILFIK
                     DGELYTEIYRGTKTRKEFFQKILDVLAKLGGDSDDVI"
     gene            25160..>27013
                     /locus_tag="U0290_000865"
     CDS             25160..>27013
                     /locus_tag="U0290_000865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2300912.1"
                     /translation="MTLFDLAKKNIRHNFVHYFLYFASMIFSIMIYFTFLVLSKDPSV
                     VARIDQSAKLSTAFSSSSVILLIFVAIFILYSNNFFTRKRKKEIGLYSLLGLRKKEIG
                     RMLFYENFIMGLGALIIGIIAGTLLSKLFVTILLNLINLDSIGGFAFSWAAVIQTSIV
                     FIIITLFTSFTGYRIIYRTTLLDLFHSESKREKSPKPSFILALLSILLIGLGYFIAGQ
                     PLDSKGSIWAQLGFSIGALVILASVIIGTALFITFFLPYLLTKLRNNKRIFYKGSNII
                     STSQLAFRISSNAKTLIIISILSATTLSAIGTISSVYYQANTSASTSAPSSFEYEIPK
                     DSETNNKIIKTAESDPDHPVEFKQKSTYYIVKAEGARPDFVEYDINEGFPVISESDYN
                     SLVKKEGTPEKTANLKENEAQMVLTITYDEDAQKEMIGEKFTLNSPDKPNIKIKSVVQ
                     NSPISTIPGLLVLPDSQVAKIAADSSIAAHGVESISVKDAKQAQALDKKMRAVIPKDT
                     NFVSYTKMYQEIITVTGVLLFIGMFIGFVFLAATGSIIYFKQLTEAYNDIGTFDILKK
                     IGLTRRDIRKVLAKQLLVVFLIPLIIGIAHSSFALLGLSHMLALDLTLPVVI"
BASE COUNT         8126 a         5286 c         5068 g         8533 t
ORIGIN      
        1 aggggatgtt tacaatggcg aaagaaaaaa tcgtattagc ttactcaggt gggttagata
       61 cttctgtggc aattcagtgg ttagtagaat caggttatga agttattgca tgttgcttag
      121 atgttggtga aggcaaaaat ttggatttta ttaaagaaaa agccattact gttggagcaa
      181 gtgaatccta cacgattgat gcaaaagaag aattcgcgga ggattttgcg ttaattgccc
      241 ttcaagccca cgcatattat gaaggaaaat atccgcttat ttccgcttta agtcgtccgt
      301 taattgcgaa aaaattagta gaagtagctc gtcaagaagg tgcctctgct atcgctcatg
      361 gttgtactgg taaaggaaat gaccaagttc ggtttgaagt agcgattcat gcacttgctc
      421 ctgatttaaa agttgtttcc cctgtccgtg attggaaatg gtctagagaa gaagaaatca
      481 attacgccaa agaacataac atccctgttc caattgattt agataatcct ttctcgattg
      541 accaaaacct ttggggtaga agtaacgaat gtggggtgct tgaaaaccca tggacaacac
      601 caccagaagc agcttacgac ttaacagtga gtttagaaga cgcaccagat acaccagata
      661 ttgttgaaat tacgtttgat gctggtattc caatttctct aaatggagaa aatatgagcc
      721 tagcaaattt aatccttact ttaaatgaaa ttgctggaaa acatggtgtc ggtagaatcg
      781 atcatatcga aaatcgttta gttggcatta aatcacgtga agtatatgaa tgtccggccg
      841 cagtcacttt gattactgca cataaagaat tagaagattt aacttttgtt cgtgaagtgg
      901 cacatttcaa acctattatc gaacaaaaaa tcagcgaaac aatttacaat ggcctatggt
      961 tctcaccttt gacagaagca ttagttgctt tcttaaaatc cacgcaaaaa ttcgtgaacg
     1021 gtacgattcg cgtcaaatta tttaaaggtc atgccattgt ggaaggaaga aaatcaccaa
     1081 attcgcttta tgatgaaaac ctagcgactt acacgtcttc cgatacattc gaccaagatg
     1141 cagcagttgg tttcatcaag ctttggggat taccaacgaa agtaagcgca gaagttaatt
     1201 caaaagtgac aataacaact gaggtgtaaa aaatggaaaa actatggggc ggacgttttc
     1261 aagggaaaag tgaagcatgg attgacgatt ttggtgcttc gatttctttt gatcaaaaaa
     1321 tggcaaaaga agacttggcg ggaagtttag cgcatgtcgc tatgctcagc aaatgcggaa
     1381 ttattcctgc ttcagaagca gctgaaatta cggccggatt aaaaatcctc caagaaaaat
     1441 tagcgcttgg tgagctcgaa ttcagcacag ttaacgaaga tattcattta aatatcgaaa
     1501 aactattgca cgaggaaatc ggcccagtcg ctggaaaact tcatacggcg cgcagtcgga
     1561 atgatcaagt tgcaacagac atgcatttgt atttaaaaca agccgtagca gaaattattc
     1621 agtcattaaa acatttacgc gtggtgctag tccaaaaagc ggaggcgaac gtcgaaacga
     1681 ttatgcctgg ctatacacac ttgcaacacg cccaacccat ctcttttgca catcatttat
     1741 tagcttactt tggaatgttt acacgggatt tggagcgttt agaagaaagt gtcaaacgga
     1801 ttgatatttc accgctcggt tctgctgcgc tggctgggac gacttttccg attgaccgag
     1861 cctacagcgc tgaattactt ggtttttccg ctatctatga aaatagttta gacggcgtga
     1921 gtgatcgtga ttttattatc gagtttctta gtaacagttc tattttaatg atgcatttat
     1981 cgcgtttttg tgaggaattg atactttgga cgagtcatga atttcaattt gtcgagttaa
     2041 cggatgcttt ttcaacggga agttcaatta tgccgcaaaa gaaaaatcca gatatggctg
     2101 agttaattcg cggtaaaact ggccgggttt acggaaacct gttcggcatg ctaacggttt
     2161 taaaaggtct cccactcgct tacaataaag acttgcaaga agataaggaa ggcatgtttg
     2221 atacgcttga gacggttcaa acaagcttag atattttcgc aggaatgatt gaaacgatga
     2281 agatcaacac agaaataatg gaagaatcga cgcaaaaaga tttttccaat gcgacggaac
     2341 tagcagatta tttagcgaaa aaaggcgttc catttagaga agcgcatgag attgttggga
     2401 aattggtgct tgaatgtacg caaaatggga tttatttgca agatgtagcg cttagccact
     2461 atcaggaaat aaatccactt attgatgatg atatttacgt ggtgctttcc tctaaaactg
     2521 ccgtgcaaaa aagaaattct tacggcggga ctggatttga tcaaattaaa gttgctctcg
     2581 aaaacgcgaa aaaaacattg taaaactaac tgggatgctg aatggcgttc cagttttttg
     2641 ctgacttctc cccctttttc ctcttacatg atttgtcaga gcactacttt ttttgttact
     2701 attaaaaaga atgttacctt tttgctaaca tggggaaata gatacagaga atataaaggg
     2761 aagtgatgta ttgaaaaaat taacaagtgt tttttgggga tcgggttgtc ttgttttatt
     2821 agccgtttta tttggagcct ttttgccaaa acaatttgaa gcttttacaa ccaatatcca
     2881 aaaatttcta acaagtaatt ttggttggta ctatttaatt gttgtagcga ttattattat
     2941 cttctgcttg tttttagttt taagtccgat tggctcgatt cgcctcggaa aacctggtga
     3001 ggaaccgggg tatagtaata agtcttggtt tgcgatgttg tttagtgctg gaatgggaat
     3061 tggcctcgtt ttctggggtg cagctgagcc gttatctcat tatgcagtcc aagctcctgg
     3121 cggtgaagtc ggcacgcaag cagcgatgaa agatgcgctt cgctattcat tcttccactg
     3181 gggaatttct gcttggtcga tttatgcgat tgtcgcttta gcactggctt acttcaaatt
     3241 ccggaaaaat gcgccgggtt taataagtgc cactctttat cctattttag ggaaacatgc
     3301 caaaggtcca attggacaat tgattgatat catcgctgtt tttgcgacag tcatcggtgt
     3361 tgcaacgaca ctcggccttg gcgctcaaca aattaatggt ggtcttacat acttgtttgg
     3421 cgttccaaac aattttactg tccaatttac cattattatc attgtcacca ttttatttat
     3481 gttatcagcc atgtctggac ttgataaagg gattcagctt ttaagtaatg taaatattta
     3541 tgttgctgga gttttattag ttttaaccct tattcttgga cctaccctat tcattatgaa
     3601 taacttcacc aattcatttg gtgactactt acaaaatatc atccaaatga gttttcagac
     3661 agcacctgat gcgcctgatg ctcgaaaatg gattgactca tggactattt tttattgggc
     3721 ttggtggctt tcttggtcac cgttcgttgg gatttttatt gccagaattt cacgcggcag
     3781 aacgattcgc caattcttgc tcggtgtcat cgtgttgccc gctttagtca gtgtattttg
     3841 gtttgccgta tttggcggct cggcgatttt tgtcgaacaa catggaaatt ctgggctttc
     3901 aagtttagca actgaacaag tactctttgg ggtatttaat gaattcccag ctggtatggt
     3961 tttatcgatt gttgcgatga ttttaattgc agtcttcttt attacttcag cagactcagc
     4021 cacatttgtt ctcggtatgc aaacgacggg cggatcttta aatccaccaa actccgtcaa
     4081 agtaacatgg ggcctactcc aagcaggaat agcaagtgtg ctactttatg caggaggact
     4141 cacagctctt caaaacgcat cgattatagc agcctttccg ttttctatcg tcattatctt
     4201 aatgattgtt tcgttattcg tttcgttaac gagggaacaa gaaaaactcg gattgtacgt
     4261 ccgaccgaaa aaatcacaac gttcccaact ataataaaaa gggatgaaaa tctacaacta
     4321 gattttcatc ccttttttca tccttttttc tgctttgccg cgactatttc gcgatagcta
     4381 cgagtttgtt taggatattt ttttcgaaag aaatgttgcg aaacaactgc taacacgaga
     4441 gaaatggcgg taattggaat agagctttta aatataccga ccatcagtaa taaagcactg
     4501 gcaaataacg ttgcattaaa aaggaatttt tccattagtt actcctccaa attataattt
     4561 aattcgcggt catgagctaa tttttttata cctaacgcat caaatactaa cgctttttcc
     4621 gcaatatagg cattgtattc aatacgctct agcatgtcgt atgctttatg aagtgatgta
     4681 tctaatacga caataccgtg tttatttaat aaacttgcac taggaacagc tttatctcct
     4741 agttcgataa cgtgtttacg aacgatttcc gcaagttctg gactagtcgc tggcgcaaat
     4801 tcaagtgttg gaatttggcc aattttttgc gttgcttctg ttaaattcgg taattccatt
     4861 ccaagtgtgg caaatagcat cgattctttt ggatgagcat ggagtacaca gccaattttt
     4921 ggattttcta cgtaacaagc gcggtgtaag ttaatttctc tagtaactct tccgtcccct
     4981 tctacgactt cattgttatt atccactaca aggatttcat atggggaaag atcgcaaagt
     5041 tttgcttgac tcatgagtgt aggtgtcata ataatgtgct cactattcat gcgcacactt
     5101 acatttcctc cagctgcatt cgtttcaaag cggtcaaaca tcgtcttcac tatttttgct
     5161 aaatcttcac gttctttttg gtataacata ttatctctcc tccaattgta taatgcttac
     5221 ttgattcttg agttttccag cagcttctaa atcaaagctc gaactgtctt gttgcatgac
     5281 tttactagcg gaacaacctg tcgcgacttt taatgtttca gtaatcggca tgttcatcgc
     5341 aagtcctgca ataaatgccc caacaaacac atcgccagcc ccagtatcat tgcgttcctg
     5401 cacttttggt ggaataactt gatacaactt gccattatgc gcgcaaagtg atccttttgc
     5461 tccaagcgaa acgactagat agggaatttt tccggctaat ttgcggacat tttcttctag
     5521 tgaattggtc gtttcatcca aaatggcaat gacttcatct tcatttggtt taatgaaatc
     5581 aacgcccatt tcgaccgcta agtttaaata ttcaccagaa ttatcacatc cgagaaacgc
     5641 tcctgttgct ttgacagttc ttagtagttc tttaaaatca gataatgtat aatgaggagg
     5701 cggagatcca gcaatcacca ccatatcctc ttttttaact tttttagcga tttgttttaa
     5761 aagattgtct ttgttggtct gacttacggt aaaaccagct tcaggtatca tcgtgctgcc
     5821 attcgtgtca tcacttaaga cgacgaagca ttctcttgtc gaagttccag cttctacaag
     5881 gaaatcatgg ttgatatgtt tttcttttag aatggcatat agtttgtcga gattgtccga
     5941 tcccgcaatt ccaagtgctt catttttaat accgaatttg gataacactc ccgaaacatg
     6001 aagccccttt cccccgcaat caaattccgt ttttttgact cgattagtct tccttttttc
     6061 taactctcct tgaatgaaaa gcaaccggtc aatggctgga tttaatgtta tcgtgtaaat
     6121 catctcatca ctcctatttc ttaagagcta gctttttcta gttcaattgt tcgttttttc
     6181 atcattttca catagaatac tagtaatact acccaaattg cgacaaaaat aaagcctaaa
     6241 atagtaaact gacttgcttc tgcaaagata taacggaaca ctggatattc aagtgtactc
     6301 catgtaattt gttgtccagc ttttagcgaa attgcgcctg ttgaatgcgc taaatccgta
     6361 attgttccag cgaagaaagt agatacatat aagaaaatcg gtgtggtaat tgttccaagg
     6421 ataatcatac gaattaagtt tccacctgtt acgataagtg ctggtgcgca taaagaaata
     6481 tttaaaatcc cagcgaacgg taatacgcca tttcctggta aaataagcgc aaagataagt
     6541 gtaactggaa ccatcagaac gattgctacc caaacttcac tacatcctgc taaaatcggc
     6601 caatctagcc caataaacaa ttcacggttt ttaaatttac gtttcatgaa ctcagaaata
     6661 ccatcagata gtggcgaaag agcttgcata aatagttttg caaccatcgg gaaaagagtt
     6721 aatgctgctg cagcttgcat ggctaacatc aaggttttcg caacatcata accagctgca
     6781 atccccagaa gtccaccgat aataaagccc atcacatggt tttctgcaaa aataccaatt
     6841 ttatctttta acgcattggc atccatgtct ttacgaagtg ctggaatttt tttcagtaac
     6901 cagtcaagcg gcattaagaa aatacagaaa atcatcatac cgtgagaaac ggttacacct
     6961 ggaattccat ttaactcttg aatttgacgt tggttggcat cacatagaat tagttctgta
     7021 acaatttgaa ttccggcaac aataaatgct aagtaaacat tttgtgttac accgataata
     7081 agtacggctg ttaaaatttt cccccaaaca ttccataaat cgacgtttaa ggttttggtt
     7141 ttattgataa cgagcataat tgcgttaata cctagttgta gcgggaacat caagaaggca
     7201 aatggccatg cccaagcaag tgttgccatc gatgtccagc ctccatctaa gatgcttaaa
     7261 ttaatccctg ttctctcagc tagtccttgt gcagctggtg ttaaagcttc aatcataaag
     7321 ccgataacga tgttcattcc aaggaaagca acccctagaa taatccccgc actgactgca
     7381 tctcttactt tcattcgtac aattagccca ataataatca ttagtgctgg aacaaaaacg
     7441 gcagctccaa ggttcaaaat aaactgtata actgattgta atgactccat tttttcacgc
     7501 tccctgtttt atctggttta ttttaaggcg ttaagtaatt tttctgtttc ttcgtccatg
     7561 cccatgcctg ttaagaaggc aataccattc aatgttggaa tatcgaattc tttgttcgct
     7621 tttgtaatag ctacatatac atcacttgtt ttaatatgtt gctctaaaga cttaatatct
     7681 actgcttcta cagttgcacg aacccctttt tcttttaaaa ttcgttctac ttttgatgct
     7741 actgtttggc ttgttgctac acctgatcca catgctacga taactttttt cattgtaatc
     7801 actctccaaa ttgttttttt aggaaatcac ataaagtatt gctatcattt attgttttta
     7861 tttgttccac aaagtctgct tccataaatt tctccatgat acttgaaagc agtggaactt
     7921 gatcttgggg atttttgatt cctaacatga aaattacttc gacatcaatc cacttatctg
     7981 tcgttcccat ttgaataaaa ggaatcggcg tagaaagttt atttacgagt acaaaaggac
     8041 gttttacata aatcgtgtct gtatgaggaa ttgcaatttt gatgccattc atctcgagac
     8101 cagtaggaaa aacaacttct cggcttgtta ccgcttctct aaaagtcggc tctacatact
     8161 gctctttctc taatatcttg ctcgtgtatt caaaaagttc tgcctgattc tcgtatcttg
     8221 aatttatcag ggttaactct ttttgaaaca aatcatggta atccacgcga cgctcacccc
     8281 ctttcaagga tttcaacgat tttctttttg ttagtagaag cgagaattcc cgctaatttc
     8341 tcaggcttca agaaaatttc gttcaatttt agtaataatg gtatatgttt gttttgttca
     8401 gatggtgcta aggcaatcat gattttgact gcttcatttt caggggtttt tgtgtccgct
     8461 ttcattatca tcaactgaat atcttgctca attaccccgt ttgcgggttt ggcatgtggt
     8521 aaataaatat tcggcccaat catcatctgc tcataatttt gatagaatat ttcttcacaa
     8581 gtatgaatgt aactagcatc caccgttcct cgttctaaca ttggtgcaaa tgccaccgaa
     8641 actagttgct cccactcaag tggcgtttct aagaagtgaa cctgctcttc cgtaatttgc
     8701 atttgttctg gttctttctt ctccataggt tgctcttttt tgttgaaaaa ggattccatt
     8761 ttggcttgca ctaatcgaat attttcttcg ggaatttcat cttttagcat agcaagcagt
     8821 tctttggttt ttttatgact gtccatttcg attgctttat ccacttgttc cctaaggatt
     8881 tggcggctgt ctttacttaa aatggacggg attacaaaaa tggtggcatc gctttgaacg
     8941 ggcacagtcg taaaaataaa atcaatatcg cgtgccaccg tacttaattg ccgcaccgca
     9001 taagctcctt gaaaatcaat attcggaaac atcattttca agttttctaa cagtagttta
     9061 gagatggatg taccactttt acaaaggaca actgcgcgga aaatcggctg ttctgtttct
     9121 tcaatttgat acatccaccc aagaactatc atagaaagat acacaatctc ctcttctgac
     9181 cacttgtgac caaccaattt ttcaaaaggt ttggaggctt tttctacaat gttaaatgtc
     9241 ggggtgtact ctttaataaa ctgcttttta agtggattat tgatttgaaa tcctaaaatt
     9301 gttcggtaaa ttgctggcct aacatgtaaa atcacttttt ctttaaattc atttttcttc
     9361 atgatttccg tcgcaaaata catttctagt aaacgaatga actcgtcgac tgcgtaggcg
     9421 atttcttcac tgtctgagaa atgaagcgcc gactcgacta agttcgaagc gaggacttgt
     9481 aacgataagt aaagtaaatc gttttcactt aaaaaatcat acccccaaaa catttctttc
     9541 attatcggga actcacgggt atttttgatg tcatacattt caattttaaa tgtccatttc
     9601 ttgtttgtta ctttggatct tttgatgatg ccgtggagaa tatagggcaa ttcttccatc
     9661 tgctcatctg taaaggtaat ttgaagctta ctttcaacct tttcgagccg tttttttagt
     9721 aaaaacactt cgctcacagt aatcagcttc ttttcatcaa ggacaaattt cccgtatggg
     9781 gtctgaacga cttcgcgaat aagttctgct agtaaattac gaatcagaaa ttctgaacca
     9841 gaaacagcgt agccatctct cctcgaataa tcaagctgaa tttcaaactc atgcagactc
     9901 tctttgatac ttttaacatc tgtaagcatg gtgtttttac ttacataaac gtagtccgca
     9961 agcgctccga gtgacatata atgattatga agtagtaatt taatcatgat aagtttgcga
    10021 cgaatattta cctcataaaa cgaaaacagc tgttgctctt ccgcagttaa aagccggtaa
    10081 caagcttccc tacatacatc tgtaacaaaa atcatatcat gatcaatcaa aattggttct
    10141 gactttagta gatggtttat ttgtgtaatc tgtgcgctaa ttgcttcttt ggatacttta
    10201 aaattcttgg aaacatttct aagattcact tgtcgattca agagcagata agtaattaat
    10261 tccttacaat tctgttccat ctactttccc ctcccttata ttaatagtaa atgataaccc
    10321 ttacataaaa atggtgattc atcacaactt cgcttttggc agaaagattt attgtgatga
    10381 gttaaaatcg cgggttactt tctattatag attagaagga ttttttgggg aatatgaaaa
    10441 aagtgcaaga tagctttaaa tcaagcttcc tcgcactttt tttctattaa tatttgcttt
    10501 attatttcag ctatacgtct cgcttctgtc ttctcaagcc gcgcataagt tacacggata
    10561 accgcttctt ttaccccaaa taaaaatcct ggcataacaa gtaaatcatt cgctaaaaat
    10621 atatcaaaat cacgaatcga gcgaaattcg actggtaatt tcacccataa atgaaaacca
    10681 ccttttggct taataaatac tacatcattc ggtaaaatgg cttcgaaagc ttcgattaaa
    10741 tcatctcggc gctgttttaa tacgtggtgc aattgctgta aatgcacctt gtaaccgggc
    10801 gtattcaaaa cactatttgc cagtacttgt ggaaaaatac ttaaaccaaa atccatctct
    10861 tgcctggcga gcgcgagccg ttcaattact gctgtcggac caataagcca accaattcgt
    10921 gtagtggatc ccataatttt tgagagcgag ccaatgtata acacattatc tgtgtccagt
    10981 tgtttcagtg gtgccggaac ttggctgtct agtgcggcta gttctgaaaa tggatcatct
    11041 tcaactatcg gtatttgcaa atgagcgcaa attttcacga gttctttgcg ccgttccaaa
    11101 ctcattacaa gtccagttgg attttgaaag gttggattaa caaaaaccat tttcacacgg
    11161 tgtttatggt ataaatcgcg taattcagaa ataatgacac catcctcgtc cattggtagt
    11221 gcaaaaatcc gcaaaccggc tgactgaaac aacgatagcg aataaaagta ggaaggcgac
    11281 tcaattgcca cagcatcacc cggttttaat aaacattgcg taattaaaaa gagcgcttgt
    11341 tgtgcacccg atgtaatgaa aatttgttcg ggtcgtgttt gtaagccata agcttccttc
    11401 atctgttttt gaatcgtttc acgcagtggt ttgtatcccg cttcatcctc ctgttgttct
    11461 tctgcaataa aagactgcca tgaaagactc ggtgtttcca tttttggcgt catttcaagt
    11521 ggcaattccc cgctcgctgc atcaatcact tgatccgaat cagctcgttc cattactccc
    11581 gcttgccgaa tataagggac tgctggtgta aagccccctt gcgttaaata atggcgccaa
    11641 ttggttgact gccctgcaaa aagcccccat ttttccgcat tgactgtcgt tccactacct
    11701 tgtttgcgaa tgataaccgc acgtgctgta agttcatcga gcgcccgcac aaccgtcgaa
    11761 cgattcaccc caaacatttc cgccaactgt ctttccggag gcaacttctc ttctggcaaa
    11821 agttctccgt tgataatttt tgtttctatt aaatctacaa tttgtaaata aattggtaaa
    11881 ttagaatttc cagcaagttt ccacatctac tacacctctt ttataattgg atggagaaaa
    11941 caacatccaa ttggctgttt ttacgaaatg gcttttagct tatcataata atcaggtatt
    12001 ttcaattaac tttgatggag gttattagta tggagaaaaa agttggtaca gatcgtgtaa
    12061 aacgtggtat ggcgcaaatg caaaaaggtg gcgtcattat ggacgtagtt aatgctgaac
    12121 aagcaaaaat cgcagaagaa gctggcgctg ttgccgttat ggcgcttgaa cgggttcctt
    12181 ccgatattcg tgcagctggt ggtgtcgctc gtatggccga tcctcgtatt gtcgaagaag
    12241 taatgaacgc tgtttctatc cccgtaatgg cgaaagcacg tattggtcat attacagaag
    12301 ctcgcgtcct tgaagcaatg ggtgttgatt atatcgacga aagtgaagta ttaacaccag
    12361 ccgatgatga attccattta ttaaaatcag atttcactgt cccattcgtg tgtggttgtc
    12421 gtgatattgg tgaagcactc cgccgtattg gtgaaggggc tgccatgctt cgtacaaaag
    12481 gagaacccgg aacaggcaat atcgttgaag ctgtccgcca catgcgccaa gtaaacggtc
    12541 aaatccgcca aattgcggga atgacggatg atgagttaat ggttgccgct aaaaacttcg
    12601 gtgctccata tgaattaatc aaagaaatta aaacacttgg caaacttccg gtcgttaatt
    12661 ttgctgctgg tggtgttgcg actcccgcag atgccgcatt aatgatggaa cttggagcag
    12721 acggcgtttt cgttggttct ggtattttca aatcagataa ccctgccaaa tttgccagtg
    12781 cgattgtcca agctaccact tactatactg actatgagct aatcggaaaa ctttccaaag
    12841 agctaggttc cccgatgaaa ggaatcgaaa tgtctcgcct taacccagaa gacagaatgc
    12901 aagatcggag catttaatat gaaaaaaatt ggagtccttg caattcaagg tgcagttgat
    12961 gaacatatcc aaatgattga atcagccggt gctcttgctt ttaaagtaaa gcattcaagt
    13021 gatttagatg gacttgacgg gcttgtttta cctggtggtg aaagtacaac gatgcgcaag
    13081 attatgaagc gttatgattt aatggaacct atccgcgcat ttgcaagtga agggaaagct
    13141 atttttggaa cttgtgctgg gcttgtcctt ttgtcaaaag aaattgaagg tggcgaagag
    13201 agcctaggat tgattgaagc taccgcgatc cgtaatggtt ttggtaggca gaaagagagt
    13261 tttgaagccg aattaaacat cgaagcattt ggtgaacctg cgtttgaagc tatatttatc
    13321 cgcgcaccat acttaattga accgagtaat gaggtagctg tgttagcaac agttgaaaat
    13381 cgaatcgtag cagctaaaca agctaatatt ttagttaccg cattccatcc tgaacttact
    13441 aacgacaatc gctggatgaa ttacttcctc gaaaaaatgg tataaaaaaa gcagtagaca
    13501 atttagtcta ctgcttttgc atattattta ttcactgctt gcgctgctgt aattaacgtt
    13561 aagttataaa cgtcatctgt attacaacca cgagataaat cattaactgg tgcatttaag
    13621 ccttgtaaaa ttgggccaac tgcttcaaag ttacctaaac gttgcgcaat tttgtaacca
    13681 atgtttcctg cttctaggct tgggaagata aatacatttg cgtccccttt aataacggat
    13741 cctggcgctt ttttctcagc aaccgttgga acaaatgctg cgtcaaattg gaattcacca
    13801 tcaagcgtta attcaggtgc tttttctttt gcaagagcag ttgcttctac gactttttcc
    13861 gtttcatcgg attttgcaga accttttgta gagaaactta acattgcaac acgcgggtca
    13921 atgccgaaga tttctgctgt ttccgcactt acaatcgcat tttccgctaa gtctgctgca
    13981 actggtgcaa tgttgatagc tacatcactg aataaatagc gttcttcacc gcgaaccata
    14041 atcattgcgc cggcaacttt acttacgcct ggttttgttt taataatttg tagtgctggg
    14101 cgaacagtgt caccagtaga gtgagccgcg ccacttacaa gaccttctgc ttttccagtg
    14161 tatacaagca ttgttccaaa atagtttgga tcaacgagca ttttacgtgc agcttcttct
    14221 gttgctttcc ctttacgacg ttctacaaat gcagccacta attcatcaaa aagtggatcg
    14281 gtcgcaggtt cgtgaatagc gattccttca acagaaacgc caatttcttt tgcttttgct
    14341 tcaatttcag ctttgttacc aagcaaaatt ggttttacga tattttcttt ttgcagacgt
    14401 gcagctgctc caacaatacg ttcatctgtt ccttcaggta gtacgatgcg cacgtttttc
    14461 ccagtaactt gtcctttgat tgtagtaaat aaatcactca tgtgttaatt gcctccatta
    14521 atatacatat tatagttacc attttactat aaaaaagaac aacttgacag aaaaaaagtg
    14581 attaaaaaca gctccagcac ttatttccgt gtatcaatac agaggtaaaa aggcatgctt
    14641 cttagttaaa agacggctat gctcttaaga aatttttttg ctgttatacc ctactatttt
    14701 gctattctag cagcaatttc aaaaaaacac ttcatattaa ggtctgttcg tgataaaatg
    14761 aacatagttg ataatgatta tcatgttcat taaataacat aaaaggaggc ctgctagctt
    14821 atgcaattaa atgaaactgc tgtcggtgaa aaagttcgca tctcagaatt aaaaattgag
    14881 aacgccatgc ttaaacgtcg cttacttgca cttggttgcg atgaaggttg tgatatttgt
    14941 atcaaacaaa aaggactatt tggcggtccc tgtacttttg aaacaaaagg gcaatatatc
    15001 agcattagac aatgtgatgc ttgcgccatt atggtggaac gcagatgagt caaaatacat
    15061 attgcttact cggaaaccca aataccggga aaacttcctt atttaatgca ttaacaggct
    15121 cttatgaata tgtaggaaac tggagcggag tcaccgtcga aaagaaagtc ggtacgttgc
    15181 gctcaaaaac tggaaaatta attgatttac ccggtattta tgacttaaat ccgatttctc
    15241 gtgatgaaac agttgtcact agatttttac tggaagagaa attcgattgt atgttaaata
    15301 ttgttgattc ctcgcaaatt gagcgaaatc taaatttaac cattcagcta cttgagtttg
    15361 gtgcacctgt tgtgatggga ctgaatatga ttgatgtagc tgccggtcgc ggtattcatc
    15421 taaacatcca gaaccttgcc aaacaattgc gcattccaat tttgccagta gttgctcgtt
    15481 ccggaaaagg tacagacgat attttatcta ctttgtcaga aaaacacgta gctcccgcga
    15541 ttccacttat tttaccatac ggggaacccg cggaaaaagc gattactgaa atccaagctt
    15601 taatcaaaga catgattcct gccaaacaat ctcgctggct tgctgttcaa tttctttcta
    15661 aaaatgaagt cacagaagaa tttttagcga catgccctgc tttggagcaa ttaaaacata
    15721 tccgcacaga acttgaaatt gcgcttgacg gtaaactaga aaatcatttt caccaagttc
    15781 gtgtgaatta cattcatgat atttgtttaa cctcggtcga atatacgcgc cattcggata
    15841 ttccactatc cgataaactc gataaaattt tcacccacaa gttttttggc attcctattt
    15901 ttcttggtat tatgtggttg attttccaaa taacctttac ttgggttggc gcaccgctat
    15961 ctgatttgct cgatggtttt attggcgggc cgctgacgga ctccgtaaca tcctttttaa
    16021 cagccattgg cgcatctgga tttatcactg atttggttgc agatggtatc atcgctggtg
    16081 tcggtggcgt gcttgtcttt gttcctcaaa tattggttat tttcttcttc atttctgtct
    16141 tagaagattc cggatacatg gctagaatag cggttgttat ggaccgcgta atggaaatct
    16201 tcggcttaaa tgggaaagct tttattccga tgattatcgg ctttggttgt aatgtccctg
    16261 gaattatggc ggcgcgctcg attgaagaat ccaaagaacg aacactaact attctcgttt
    16321 caccatttat gtcctgctcc gcgcgacttc ctgtttatgc tctttttgta ggcgtgtttt
    16381 tcgagaaaca tcaggcgctc gtagtacttt cactttacgt tatcggtatt ttaatggcac
    16441 ttatcgtcac taaaatttta tcaaaaactt tacttaaaaa agataattcc gtattcgtcg
    16501 tcgaactacc accctaccgc ctcccatcgc ttaaaacttt atggcgcagc acgtgggaaa
    16561 aaggaaaagg attcttgcgt aaagcgggaa cattcatttt cgcaggttcg gttatcattt
    16621 ggttgctaaa ctacgctggt ccatctggac tcgacgtacc aatgggcgaa agtttcttag
    16681 caattatcgg tggcatgctc gccccactac tcgttccgct tggtttcgga acatggcaag
    16741 cgggagccac ccttatacct ggttttctag caaaagaagt agtcgtttcc acaatggcaa
    16801 ttatttatgc agttggagaa agttcgcttg gcagcatcgt tagcactttc tatacaccac
    16861 tttcggctta ttgctttatg ttgttcatct tgctttacat cccatgttta gcgacagttg
    16921 ccgccattcg taaagaaact agttcttgga aatggaccgc atttgctgtc gcttatccac
    16981 ttgttacagc ctacgtgtta gtatttctcg tttatcaaat tggtagtcta ttcgtttaag
    17041 agaggatgtt tttcgtgagt ataatggtta atttattact tggtggcgca attttcggct
    17101 acactattta cgcgattatt aaatttatca aacgcagtaa acaaggaaaa tgtggcggct
    17161 gtgaacttga aaaagcctgt aattgcgagt cagacgaaca tacaaatttg gatcatatct
    17221 ttaaatagaa aaaagagcct tgatgaaggc tcttttttca gttcgtcgct ggctttatcg
    17281 tcactgcaac aatttcatat ggatttccta acctcggaaa tgctttttga tgaaggcttc
    17341 ccgcaccaag tccagctgaa attatcattg tctttccatc ttttgaatgt tctccgtata
    17401 cataatccgg caaaagtgtt cgctgcggtc ctggagcaat cgcaccaata ttcgtatacg
    17461 gaatacgcac aatccctcca tgcgtgtgac cacttaaagt taaatcaaaa ccattctcca
    17521 cataaagctc aaaatagtcc ggcatatgcg acaaaagaat ttgataatac gttgaatctt
    17581 gctgcttttt tatttctgct agtccttctt tataataagg atagtcataa tctaaattcg
    17641 cactactccg caatccagac atttgaaatt tctgtcctcc cacgtcgata gtagcagttt
    17701 gatcttctaa gttaactaca ccaatttttt ctaaaaatgg cttgtaatcg tcctcatagg
    17761 catttttaac atcatattca tggttccccg gcgaaaaata aaccggcgca atcttcgtaa
    17821 gctttttaat aagctcttta ggaacactat ccccttgcct atcaaaaaga tctccagtaa
    17881 ttgcaatcac atctggattt aaatttgcca ctttatgtaa caaattttca ttcttatcgc
    17941 caaattcact aaaatgcaaa tccgataatt gcactagttt aatttctttt tcaattttag
    18001 cagaactcac ttcatatttt ttcaccgtta gcctagtccc caaaaaccat cctacaacta
    18061 aaagtacaat aatcatactg attgctataa tccactttat ctttaaagcc attttctcac
    18121 ctctatgttg ctatttccat ttattatcaa tattttgtca tccattatat gttaccccta
    18181 tcattataac ctagattaag tgttgactca aaatgcacga aaaaaccacc ccaattctaa
    18241 caaaagtaga aaagggaaaa aatatcaggt tgacataaac ttgaaaaggt atataattaa
    18301 cttataaaaa cttatttata taaaaaaata aacttaagat aaattatcta aggtggcgaa
    18361 aatgatgaac caaaaagaac gaatagtgga ggaactgaag ctgctagaga acaagaaaac
    18421 tatctctcag gaagaactca tgcagatttt ttccatttca aaagatacag caaggcgcga
    18481 tattttaaaa ttagtcgaaa gcggactcgc agaacgctat ccaggtggcg tgtcactacc
    18541 agttttaaaa cctcaaatag aaagctatac aagtagatta gtaaaacaaa gtgaacagaa
    18601 aaagaaaatt gcttatgcag caggtaaagt gataaaagat catatgacaa tctatttaga
    18661 tgtttcgacc actgttcatt ttttggcttc aaaccttgag caacatgatt tagtagtagt
    18721 aacgaattcg atggataatg ccatagctgc atctcagaaa gaagcgaaca aagtatattt
    18781 gctcggtggt tttttcaact tccattcgcg tgtattatcc ggtgagcccg ttttaggtca
    18841 acttcagcaa tttaacttcg atgttgcttt tattggcggg gctggactaa cggaagatgg
    18901 catcttttat tcagaactta cagatgttta catgaaacaa gagattatca ggaattccga
    18961 aaaagtattt ttactaattg atagtacaaa agtaaataaa aagacagctt ccaaaattga
    19021 tttttctgga attgatgccg taataacaga tcagccttta ccaaaagatt taatgcagtg
    19081 ccttatttct aaagaagtag aagttatatc tttgaaagga ttgtgaaaat aatggccgtt
    19141 atcaaaaatg tgaaaattta caaagaaaat gaattaattg atgcagcagt tattacagaa
    19201 ggaaatttga taaaagaagt ttgctcaact actcctgaaa agtattcaga tgagccaact
    19261 tttgatggaa atggacagtt gctaattccc ggaatgatcg acgttcatat tcatggggca
    19321 aataattatg atatgatgga tggctcaaca gaaagcatcc aagctgtttc gatggcttgt
    19381 gcggaaaccg gatgtactag tttcttagtc acctcggtta gttcttcttt tgaagacttg
    19441 atccaaatga ttaagcaaac taaaaaagtc attggaaaag agaaaggtgc caaaattgca
    19501 ggaattcatt tagaaggccc ctaccttaat atagaaaaaa aaggaatgca aaatccagcc
    19561 tatttaagac accccgattt aaaagaaatg aaaaagatct tcgatgaagc agatggtctg
    19621 ataaaaatgg tcacaattgc tccagaattg cctaggggta tcgaactcat tgacttcttg
    19681 aaaaaaagag gagttgtggt cgccattgca cattccaatg caacttatga agaggcgcaa
    19741 aatgctttcg aacaaggagc aacccacatc acacattgct tcaatgctat gccagccatt
    19801 catcaccggg caccaggact tgttacagca gccttggaaa atgattcggt aagcgttcaa
    19861 accattgtag acggtgtcca tctccatccc ggaatcgtgc gccttattca caaaattaaa
    19921 ggaccagata aaatggttct cacaaccgat gcccttcaag caatgggagt tggcgacggg
    19981 gagtatattt ttggcggtca ccaagtaacg gttaaggaag gcatagctcg tttaaaagac
    20041 gggacattag cttcaagtac cgtgacgatg aataaatcct taaagttaag taatgaattt
    20101 gggattcact tacaagacgc tattcaaatg gcagcaagta cgccggcaga cattttagga
    20161 atgaacaatt ttggtcgaat cgaaaaaggc tatgtcgctg atttagtttt acttgataaa
    20221 aattttgaag ttctaactac atggattgat ggtgaaatat attaaatcga ctggataaat
    20281 actttcagag gagtggatta taaaatatgc cattatttaa acacgaggga acttacttta
    20341 actatgaaat ccaaggtgaa ggcataccat ttttatttct tcatggatta ggtgataatt
    20401 taaaatttgc ttatgaaaca tttgataaag acgagaaaat ccaattaatt tcattggatc
    20461 aaagaggcca tggaaaaagc ggaaacgatt ccagaaaact tagctacgac aggttggcca
    20521 aggacgcatt agcgttaatg gattatttag gaatacagca tttttttgtc ggaggattat
    20581 ctatgggggc tggcgttgcc gtgaatttgg ccgtccaagc agccgataaa gtgctgggcc
    20641 ttataatact taggagttct gcaacagatg aaccgatgaa aaaagaagtg atagcatggt
    20701 ttagtaccgt aagtaagtat ttgcctaaaa aagatggtgc cctattattg gagcaagatc
    20761 cgatttttcc atcgataaaa gagacctatc ctaaagcaat tgatacgttt aagcgctatt
    20821 ttgaagatga cgccgctgtt acccactata aaaagtttag cgacatacct aaagatagac
    20881 caataaaaaa caaaagtgag ttgactaatt taacaatccc tactcttata ctcgcaaata
    20941 actatgatgt aattcatcca atcgaataca gtttgtttta taaacgtaat attgaaaatg
    21001 caagttatta tgaactaaca cctaaaacca ttgatgcaga aaaacataaa ctggaaataa
    21061 cgacttatat aaatacattt atcattaata catcaaaaaa aacaaattat aagtaatcca
    21121 aaatgatatt ttagttgtca tttcataaag caataaagaa gcagaaatct tgtatattcc
    21181 attttcaaaa tggcttttat acaatgattt ctgcttattt gttatttcac aggcggattc
    21241 gaaacaatcg ccgtcatttt tccatcaatt tcccaagatt ttacatcatt cggcaataca
    21301 aaatgatcgc cttttttaat cgattgtttt gttccatcaa tcgtaagtac cgcttctccg
    21361 tctaaaacac tcactaacgt ataaggagct ttagccatga attcagccgc gccgtccact
    21421 tcccatttgt atacgctaaa gaaatcattc gatacaaaag tagtttcagt caacccacca
    21481 cgtgtttctg ttttaatatc taacttcgca tccacatgcg gtgcagtcgt aacgtcaata
    21541 gctttatcca aatgaagttc gcgcaagttt ccttctgcgt ctttacggtc atagtcatat
    21601 acacgataag tagtatcaga gctttgttgt gtttcaagca ctaacgtccc cgtgcctaac
    21661 gcatgaattg taccacttgg aacataataa aattcacctg gtttaatcgc cactttacga
    21721 agcaatttat cccattcgcc gttttttgcc caagtagcga attcttcttt gctagctgct
    21781 ttgtgtccat atattaattc cgcaccagga gcgcagtcaa taatatacca gcattctgtt
    21841 ttgccaagtt ccccgttttc atgcactttc gcatattcgt catttggatg aacttgtaca
    21901 gaaaggtccg tattcgcatc cagaattttc gttaatagtg ggaaaacggc ttctttcgga
    21961 ttaccaaaaa gtgcaggatt ttcttgccat aattcagcta atgttttgcc tttatattcg
    22021 ccgtttttga ttaccgaagg accgttcgga tgagcggaaa tcgcccagtc ttctccagta
    22081 gtatcagacg ggatatcgta accaaaataa tcatgtaatt tcgttccacc ccaaattcgg
    22141 tcttgaaaaa cagggtttaa aaataatgct tctgtcatta taaaattacc tccattccag
    22201 cgtttttgct gggttttgtc aattaaaagt atatactaat aatggcgaag atgctagtta
    22261 tttcccgcct aaaaagcctc tttcttttat ttgttctgtt aaatttggat aataaggtct
    22321 gtcataaaat ttggctaacc gttcggtata agaaacaaag ccttctcgct ctgaaaacgg
    22381 aataatctct tggtcatatg cttctagtaa aggcatgaca tctgtttggt acgtctcttc
    22441 aaaataaact gcttcttttg gcaaacgtgg ttttacaggt gcttcgacat ccggaacgcc
    22501 aatacaaagt cccacaacgg gcatgacgaa ttctggtaaa tttagaaatt cagcggttgc
    22561 cgtaatattt ctgcgcaaac caccaataca aatcgtcccg taatcaagcg actcagcagc
    22621 tgttaaagca ttttgcatac aaagtccgat gtctgttgcc gcaaccatta gtaaatcttc
    22681 ttccccggca atttggaaac ttttgccgtg catgtcactc gctactttta cgcggtgaaa
    22741 atctgccaca aaacaaagaa aaacggaaca ttctgctatg taaggttgat ttccgcaaag
    22801 ttcggccatt ttatttttac gttcttgatc tttaatcgca ataatcgaat agtgttgacc
    22861 attaatccac gacggggctg cttgagctgc tcggataatc gcatctagat ttccttccgg
    22921 aatctcaacc ccttttttat atttacgaaa agagcgatga tttcttagca aagttaatac
    22981 gtcattcata tttatgcctc ctagatttat catttagtta aagtatagct tgtttttagg
    23041 caattgttaa tgtatagctt gtttttaggc aattgttaat gttttctctt gtatttctgc
    23101 cagatatttt ctacacttaa agaaaaagag gtgaaaagat gtgcgccaac aacaaataga
    23161 ttttaaatgg cttgaagaaa acttcctgac tgcgaatgaa gccgcgactt acttaggcat
    23221 atctaagcaa gcactccttt ccttagccaa acgcgatgta ctccccttta cgaaaaaagg
    23281 aaatatggtt cttttccacc gaatggacat tgaacttcgg cttgaaaacc aacaaagctt
    23341 acgtgaaaaa taccgtcctt ttgaaacgta aatttcacaa acagcgaaac ggacgaacta
    23401 cttcccgtat gttacacttt agttagtgat attctaaaca aggagtgata cataatgaat
    23461 gaagcagtaa aaactttaga tggatggttt tgtctacatg attttcgttc gattgactgg
    23521 gctgcgtggc gtgaactaaa tccaggtaat caggaactta tgttaaatga actcagccac
    23581 tttttaagcg atatggaaat tactaaaaat atcggtgaag gtgaacatac catttacagt
    23641 attcttggtc aaaaagcaga tttagtattc ttcactttgc gtgattccct tgaagcgctg
    23701 aatgaagtcg aaaatcgttt taataaatta gcgattgccg actacttgtt gccgacttat
    23761 tcctatatat ctgtggtgga attaagtaac tatctagcgt ctcacatggc gggcggcgaa
    23821 gatccttacc aaaacaaagg tgttcgcgcg agactctatc cagcactccc acctaaaaag
    23881 catatttgtt tctacccaat gagtaaaaaa cgggacggcg ctgataattg gtatatgctt
    23941 ccaatggaag aacgccaaca acttattcgc gaccatggct tgattggtag aagctatgcg
    24001 ggcaaagtac aacaaatcat tggtggctcc attggatttg atgattatga atggggcgtc
    24061 actttatttt ccgatgatgc actggagttc aaacgcatcg taacggaaat gcgctttgat
    24121 gaagcaagcg ctcgatatgc tgaatttggt tctttcttta ttggaaacct gttaccatcc
    24181 gagcaacttt ctaaattatt tactatttaa tataagtaaa aactggaatt caatctaaca
    24241 aatgactgat tttgttagct ggattccagt ttttttattt cactaaacta acaattttgt
    24301 aaggatatct accgtaaatg tcatttgata cgatggaacg agtcctatat acacgataga
    24361 atgatacata tactaaccga atctagtttt taaggagaga aaataatgga gacagtttta
    24421 caagcaaaaa atgtgagaaa aatatacggt agcaaaggaa atgtctacac tgcactagaa
    24481 aatatcagta ttgatattaa agaaggtgaa tttactggaa ttatgggacc atctggggct
    24541 ggtaaatcca cgttactaaa tgtcttatct actattgata aaccgacttc tggtcagatt
    24601 gtgatttccg gacaagaact cgaaaacatg aatgaacaac aaatgtccac tttccgacgt
    24661 gacaaactag gttttatatt ccaagattac aacttactag acacattaac tatccgtgaa
    24721 aatattatcc ttcccctcgc actagcgaaa cgcccagtaa aagaaatgga agaaaaatta
    24781 gcaattatca gtgaaaaatt cggcattaca gaaatccttg ataaatatcc aagcgagatt
    24841 tcaggtggtc aaaagcaacg tactgcagct tcaagagcaa ttattactgc accaagttta
    24901 atttttgccg atgagccaac cggtgcgctt gattctaaat cagcaaccaa cttacttgaa
    24961 agcttacgtg acttaaatga acaagataaa tcaacaatca tgatggtaac acatgatgcg
    25021 tttgcagcaa gtttttgcaa acgaatttta tttattaaag acggagaatt atacacagaa
    25081 atctatcgtg gaactaaaac acgtaaggag ttcttccaaa aaattctaga cgtccttgca
    25141 aaactggggg gcgactcaga tgacgttatt tgatttagct aagaaaaata ttcgacataa
    25201 ttttgtccat tactttttat attttgcatc gatgattttc agcattatga tttattttac
    25261 attccttgtt ctttcgaaag atccatctgt tgtagctaga attgaccaat cggctaaatt
    25321 atcgacagca ttttcaagct cctcagtcat tctacttatt tttgtagcga tttttatcct
    25381 ttattccaat aatttcttta cccgaaaaag aaaaaaagaa attggacttt actctttact
    25441 cggccttcgt aaaaaagaaa ttggtcgcat gttgttttat gaaaatttta ttatgggact
    25501 tggcgcatta atcatcggta ttattgccgg tacattactt tccaagcttt ttgtaaccat
    25561 tttacttaac ttaattaatc ttgatagtat tggtggtttt gccttttctt gggcagcagt
    25621 aatacaaacg agtattgtct ttattatcat cacgttattt acatcattta ctggttaccg
    25681 tattatttac cgcaccactt tacttgattt gttccactca gaatcaaaac gcgaaaaaag
    25741 tccaaaacct tcattcatct tagccttact ttcgatttta ttaattggtt taggctattt
    25801 tatcgctgga caaccacttg attctaaagg ttctatttgg gcacaacttg gcttttctat
    25861 tggggcatta gttattttag cttcggtaat cattggtact gcacttttca ttaccttttt
    25921 cttaccgtat ttacttacaa aacttagaaa taacaaacgt attttctata aaggtagtaa
    25981 cattatctcg acctcgcaat tagcctttag aatatcatcc aatgcgaaaa ccttgattat
    26041 tatttctatt ttaagtgcaa caaccctttc tgctataggg acaataagca gtgtgtatta
    26101 tcaagcaaat acgtccgcaa gcacgtccgc tccatctagc tttgaatatg aaatacctaa
    26161 agatagtgaa acaaacaata aaataattaa aactgcggaa agtgaccctg atcatccagt
    26221 agagtttaaa caaaaaagca cttactatat cgttaaagca gagggagctc gtccagactt
    26281 tgtagaatat gatataaatg agggttttcc agttatttcc gaatctgatt ataattctct
    26341 cgtaaaaaaa gaaggaacac ctgaaaaaac agctaatctc aaagaaaacg aagcacaaat
    26401 ggtactaact attacttatg acgaagatgc tcaaaaagaa atgattggtg agaaattcac
    26461 acttaattcg ccggataaac caaatattaa gattaaatct gtcgttcaaa actcaccaat
    26521 aagtactatt ccaggcttgc tcgtacttcc agacagccaa gtagctaaga tagcagcaga
    26581 ttcttcaatt gctgctcacg gtgtcgaatc catttcagtt aaagatgcaa aacaagcaca
    26641 agcattagat aagaagatgc gtgctgttat tccaaaagat acgaatttcg tttcttatac
    26701 gaagatgtac caagagatta ttacagtcac tggtgttctt ctctttatcg gaatgttcat
    26761 cggttttgtg ttcttagcag caacaggaag catcatctac ttcaaacagc taacagaagc
    26821 gtataacgat attggtactt ttgatatctt gaaaaaaatt ggtcttacac gtagagacat
    26881 tcgtaaagtc cttgctaaac agttactagt tgtattctta attccgctaa tcattggtat
    26941 tgcacatagt agttttgcac ttctcggact ttcacatatg ttagcacttg atttaacttt
    27001 gccagttgtt att
//
LOCUS       DASDYO010000023        26657 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.023, whole genome shotgun sequence.
ACCESSION   DASDYO010000023 DASDYO010000000
VERSION     DASDYO010000023.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 26657)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26657)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26657
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.023"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            98..421
                     /locus_tag="U0290_000866"
     CDS             98..421
                     /locus_tag="U0290_000866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2300913.1"
                     /translation="MTDAHTVCPKFESAFQLLGKRWTGLIINVLLTGPKRFKQVAAEI
                     PQMSDRVLAERLKELEEMDICLRQVYPETPVRIEYELTEKGKALQEVMLEVQCWADKW
                     VEVPN"
     misc_binding    514..743
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            789..1841
                     /gene="pheS"
                     /locus_tag="U0290_000867"
     CDS             789..1841
                     /gene="pheS"
                     /locus_tag="U0290_000867"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit alpha"
                     /protein_id="HEM2300914.1"
                     /translation="MLEQLQTLKNEAETQINEASDLKTLNDLRVKYLGKKGPMTEIMK
                     QMGKLSAEERPKMGSLANEVRTALTEAISSKQQILETEAINEKLKSETIDVTLPGTAP
                     SIGTKHLLTQVIEEMEDMFIGMGYEIAEGPEVELDYYNFEALNLPKDHPARDMQDSFY
                     ITENTLLRTQTSPVQARTMEKHDFSKGPIKVICPGKVYRRDNDDATHSHQFTQIEGLV
                     VGENITFADLKGTLTVLAKTMFGEEREIRLRPSFFPFTEPSVEMDISCFKCGGKGCRV
                     CKGTGWIEILGSGMVHPNVLEMSGIDSTRYSGFAFGLGPERVAMLKYAVDDIRHLYTN
                     DLRFTKQFQSTETGEI"
     gene            1841..4249
                     /locus_tag="U0290_000868"
     CDS             1841..4249
                     /locus_tag="U0290_000868"
                     /EC_number="6.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine--tRNA ligase subunit beta"
                     /protein_id="HEM2300915.1"
                     /translation="MLVSYNWVKEFFQDFPLTAEELGEAITRTGIEIEGVEELSASLK
                     NVVVGEVLSCERHPDAEKLNKCLVQTDETEPVQIICGAPNVAAGQKVIVAKVGARLPG
                     GLKIKRAKLRGEVSEGMICSLAELGFESKVVPKAYAEGIYVLPAHVETGVSAITLLGL
                     DDAILDMAITPNRADALSMNGVAHEVGAIIHQKPAQPTEPDVSEKGKADDFISVEVEN
                     PAETPYYAIKMVENIEIKESPLWLQTKLMKAGIRPHNNVVDVTNYINLLYGQPLHSFD
                     YDKIGSKKIVVRSAKEQEEITTLDGEKRTLQAGHTVITNGVEPIAIAGVMGGEFSEVT
                     ENTTTVALEGAIFSSSSIGKASRELYLRTEASIRYDKGSDAWKVEKALAHGGALIAEL
                     SGGTLVGGVVEVDNREKAVNKIETSLTRINRILGTAITLAEIETIFDRLGFVLEVKND
                     TLIIEVPTRRWDITIEADILEEVARIYGYDEIPVTLPATSTTGGLSDSQKARRVMRAY
                     LEGAGLNQALTYSLTSKKDATRLALSDEKTVALSMPMSEEHSHLRTSIVPQLIRSASY
                     NIARKNMDVALYEMGTVFYATEGDNLPIEQEHLAGLITGNWHTVDWQKTPKPVDFFVL
                     KGIVEGLVNKLGIKSELHWKQTEKEELHPGRTASLILEGQEIGYLGALHPAVEANYDL
                     KETYVFEINVAALLDATKEKVVYHPIPRYPEMTRDLALLVDKNTDHATISQVIQEHGG
                     KLLVDIELFDIFEGESLGENKKSLAYTLTFLDSERTLVEEDVQKATNKVIEALQEKLH
                     AIIR"
     gene            4410..5111
                     /locus_tag="U0290_000869"
     CDS             4410..5111
                     /locus_tag="U0290_000869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300916.1"
                     /translation="MTYVEMKDVSKYYQMGENVVTANDKITFGIKKGEFVVIVGPSGA
                     GKSTVLNILGGMDSASEGKIMVDGQDIAQYNAKQLTKYRRTDVGFVFQFYNLVPNLTA
                     KENVELAAQIAPNALDAETVLTQVGLSHRLDNFPAQLSGGEQQRVAIARALAKAPKLL
                     LCDEPTGALDYDTGKSVLKLLQETCRNTGTTVIVITHNTAITPIADRIIEINNAKVRS
                     IKENPEPMSIDDLEW"
     gene            5125..8535
                     /locus_tag="U0290_000870"
     CDS             5125..8535
                     /locus_tag="U0290_000870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsX-like permease family protein"
                     /protein_id="HEM2300917.1"
                     /translation="MKRSALWKDIYREIWRSKSRFISIFMLIMLGVAFFSGLKATGPD
                     MLLTADNYFNKYELANFNVQSTYGLDETDKEALEDISGVAQVELGYTADTLMKDKNIV
                     TKLFSNSESDNLNQYKIASGRLPEKSGEIALDDNDLVHKNVKIGDEVTFVKSDGNKLT
                     NTLKKSTYKVVGFVSSPAYIQKSERGSSTVGKGKTDAFGVIPEQDFDLPEYTIANLTF
                     NNLAAKQAFSDEYVSTEEKDKKSVEKALADQPEKRLNKIKTKEQKKLDDATAEINKRK
                     AELQENEAKLANAKAQLEEGFSEYNAAKASYDAKIKHGEAEIANGEAERRSAKKQLDT
                     AKTQIDQGETALSQAEMELEEGRAAWEDANNLLNTANGYLRSAKSTLENALKQPDLTD
                     FELDRNSLTNSFQMLASELDLSSAERAEYENAMNQLLDDYENGNISDAEIREALNAAL
                     AQVGNAENEYQSARATLDAEKQKIEQGEQTLAAKKQELQQAKTAYQEGLAKYQAGLEK
                     ISQAKQQLADGKETGSTELQSALAKLNVGQAEYEKNLALFEKEKAKAEGKLASAEKEV
                     KIGQEKLDALKLPKYYVLDRNDNPGYSEYKENADRLTSLSTAFPIFFFLIAALVCLTT
                     MTRMVEEQRTQIGTLKAFGYSNGSIILKYLVYGSTASIIGSVLGILIGFQFFPNIIFN
                     AYKSMYEMPPVDIGFYWSYSLLSLFVALFCTTFTAYVACRAELRANAATLMRPKAPKI
                     GKRIFLERISFIWKRMNFTSKVTARNLFRYKQRMLMTVLGVAGCTALILTGFGLRNSI
                     SDIAKMQYGQIMKYDAAIYQDMSAPPAAKETFDEIMNDSNIKSKLAMSQTNIETVKSG
                     QSAQTTSIIVPKNLNELPDYIVLRDRASHTTEKLTDDGAIITEKLAKLFDVKPGDTIT
                     VKNAENDKFQIKVSAITENYAMHYIYMTKSYYQQVFKEKPTYNLDLLMLKDTSEKVES
                     NFAEKLTDSKAILNVTFSNNVSSLLNETLDSLNIVIVVLITSAALLAFVVLYNLTNIN
                     VSERIRELSTIKVLGFYPKEVTMYVYRENIILTLMGIAAGFVLGFFLHRFIITTAEVD
                     QMMFSPAISWTSYLFSGILTLVFATVVMVVMHIKLKRIDMIEALKSVE"
     gene            8633..9085
                     /locus_tag="U0290_000871"
     CDS             8633..9085
                     /locus_tag="U0290_000871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2300918.1"
                     /translation="MERQKVKQLIKSYQQTYIFAMNQIHQAISEISASTVDLSIEQFF
                     VLREIATYDGISATELAATLAVNKSAITPKLKKLEEKGYIRRERNQQDKRAVVLTISE
                     KGNNVYEECEKQLELLVNEWLEILGEKDSEQFFELFQKITKSVVEPRQ"
     gene            9101..12301
                     /locus_tag="U0290_000872"
     CDS             9101..12301
                     /locus_tag="U0290_000872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEM2300919.1"
                     /translation="MKWIMKLRWAILAFWLAAAVVLMIIAPPMADLVREKGELKLPDG
                     YPSSLATEMQKKHNPDDKGSAYIAVYTADHKLTGTELNDIQDSLNSIEKDKDELHVTN
                     VLSSFNQPELKDKFLSKDGKTMVASLTVDDTDASVKSIRNALDKKMDVKGVDTYLTGN
                     KLIQEDVVQGSEDGLHKTEGITVVFILVVLFLVFRSAVAPFIPLVTVGISYLVAQSTV
                     AFLIDIFNFPVSTYTQIFMVCIMFGIGTDYCILLMSRFKEEMGAGLNPREAVHATYRT
                     AGKTVIYSGVAVLVAFTSLYFVQFDLYRSAVAVGVGIVVLLAALYTLVPFFMSTLGTH
                     LFWPLNKNISHKENKIWGAAGKFTFARPWIALLIVAAITLPPILLHTGTESFNSLDEI
                     SDKYPSKKGFEIVSDSFGAGQVAPTQIFIENDDNMRTTDYIAQIEKISDDLSHLKGID
                     MVMSASRPAGKRVDDIYIKNQAGQVNDGVGQATDGVGEVKKGLDSASSELKKSEPALD
                     KAVAGVSDLQKGTVATQEGINQLQTALAQIQTGIESGATGAGDLKQGVAEAKSQLATL
                     QNGEAQIQAGYVEIQKNLQNVADQLKGFEDPSSQAIDTSKLEEQFKKIGASFQAFAAA
                     HPEVRNDPRFQKLAADIQGLETAGNELKTSAGQQMAALQAKMKELNQGIQQLATAMNQ
                     LNEQSKQISDGLSAFSTGLGQIETGLDQLEKGLNQAADGQGQVVSKMPEISNALTQIA
                     AGQGALKDGFAGISGQMGQLTDGLTSGADGLGKVESGLNTANGLIDDWSKVPYASSGI
                     YVPDALLKNADFQKVLDQYISSDGKLATINVILTKNPYSNEAMDSIDDINEQLSASMK
                     GTKLENAKIGIGGMTSANYDTRDMSTADYHLVLVIVLASVFVTLVIVLRSLVMPIYLI
                     ASLVLTYFAALGFAEIIFMRILGYSGLTWATPFFGFVVLVALGIDYSIFLMSRFNEYN
                     GLSVRDRMIKAMKNMGGVIFSAVIILGGTFAAMMPAGVLSLLEIATVVLIGLVLYAVV
                     ILPLFVPVMVKLFGRGNWWPFITRKGDHQENVPPKK"
     gene            12405..13079
                     /locus_tag="U0290_000873"
     CDS             12405..13079
                     /locus_tag="U0290_000873"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEM2300920.1"
                     /translation="MIKLGNDWDELLKDEFNQPYYLTLRQFLKKEYQTKKVFPDMYDI
                     FNALKYTACKDVKVVILGQDPYHGPGQAHGLSFSVQQGVQIPPSLQNIYLELHNDLNC
                     EIPNNGYLIRWADQGVLLLNTVLTVRAGQANSHRGQGWEILTNRIIEIINQKEEPVVF
                     LLWGNNAKEKLQLLTNPKHTAFTSVHPSPLSASRGFMGCKHFSKTNQFLEQNGVKPID
                     WQIPSI"
     gene            complement(13117..14043)
                     /locus_tag="U0290_000874"
     CDS             complement(13117..14043)
                     /locus_tag="U0290_000874"
                     /EC_number="3.1.26.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease HIII"
                     /protein_id="HEM2300921.1"
                     /translation="MANTVILVDQPTLEKMKQTYLPFSNPKLPPGAVFAAKKTGVSIT
                     GYKSRKVMFQGVNGEVEAKKWVATLPESKTKAPSVSKGILPANFASKNVIGSDEVGTG
                     DFFGPITVCAAYVDAEMMPLLKELGVKDSKAMKDPEICRIAEKIMPLVPHSVLLCPNP
                     KYNELQKRGMNQGQMKALLHNRAIENVLKKLAPVKPEAILIDQFAEKNTYYRYLAKEP
                     SIIREDVFFATKAEGLHLSVAAASIIARYKFVQAFDAMSKEVGIPLPKGAGPHVDAVA
                     AEIIERFGLETLAKYTKQHFANTEKALKMVKK"
     gene            14197..14460
                     /gene="zapA"
                     /locus_tag="U0290_000875"
     CDS             14197..14460
                     /gene="zapA"
                     /locus_tag="U0290_000875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein ZapA"
                     /protein_id="HEM2300922.1"
                     /translation="MANERNKVVTTIYGREYTIVGVETTDHLRKVAREVDEKMHEIGS
                     QNHALDSGRLAVLTAVNATHDYLKLEQKYLELEQELARIKGRD"
     gene            14460..15002
                     /locus_tag="U0290_000876"
     CDS             14460..15002
                     /locus_tag="U0290_000876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CvpA family protein"
                     /protein_id="HEM2300923.1"
                     /translation="MILNAIILILLVCGFFAGFRTGLIKQLILLLGYILAFFISYTYY
                     EDLAPHLTFIPYPGSDTADGLSIILQELRTETAYYNVLGFAIIFIVAIIVVHMLASLV
                     GGLTKIPVLRQINGLLAAVFGVVKSYLIIFVVLFIMAIYPANWSENLIDSSTVAQWML
                     ENTPILSEQFYDWMTDILPK"
     gene            15094..16806
                     /gene="polX"
                     /locus_tag="U0290_000877"
     CDS             15094..16806
                     /gene="polX"
                     /locus_tag="U0290_000877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase/3'-5' exonuclease PolX"
                     /protein_id="HEM2300924.1"
                     /translation="MATNKKEIIRLLEEIATYMELKGENSFKISAFRKAAQAIELDSR
                     SLSEIDDFTKISGIGKTTGEIIQRYLDSGECPELEALKKEVPAGLVPLLDVPGLGGKK
                     LSRLYHELGVVDKDTLLQEAENGHIEALKGFGKKSAEKMAEAVREMGERPDRYPLNDV
                     LPIIQKVEAYLADIAPIETFAQAGSLRRLRETVKDLDYVIATEKPEEVQKALLAFPLI
                     TDVIGAGETKVSAVLEDNITISVDFRLVEKKAFATTLHHFTGSKDHNIKMRQLAKQSN
                     EKISEYGVEQEDGSVRHFESEKAFFEHFKIPFLPPEVRRDGTEIERVTKDTKFLELSD
                     IRGDLHMHTTWSDGAYAIPEMIEACIAKGYEYMVITDHGKFLRVANGLDEKRLLEQQA
                     EIKKIAANYPEIDVYSGVEMDILADGSLDFDDETLKQLDFVIASIHSSFQQSEEEIMK
                     RLKTACENPYVRLIAHPTGRIVVKRKPYHVNMKELIQLAKNTGTALELNANPQRLDLN
                     REHLEMAHAAGVPIAINTDAHDTKHLDFMSIGVRAATKAWLDKSAILNTKTAAEFKHF
                     LQNK"
     gene            16829..19186
                     /locus_tag="U0290_000878"
     CDS             16829..19186
                     /locus_tag="U0290_000878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease MutS2"
                     /protein_id="HEM2300925.1"
                     /translation="MEKKVEAILEFDKIKKQLTEFASSSLGEQAILELAPATDFQVVQ
                     KTQLETEEGAKIIRLRGSAPITGLTDVFAHLKRLEIGGDLNGLEIYQIGSNLRVSRQM
                     KNFMNDLLEIGVELPLLGALSDELLVLKEVEEDIAISVDESGKVLDTASEALSTIRRT
                     LRRTEDRVREKLESYLRDRNASKMLSDAVITIRNDRYVIPVKQEYKGHYGGIVHDQSA
                     SGQTLFIEPQSVVDLNNERKALQAKEKQEIERILAEISASLAAWINEIHHNTFILGRF
                     DFIFAKARFGKAMKAVTPHLSDAGVVHLIAARHPLLDAAKVVANDIYLGEDFTTIVIT
                     GPNTGGKTITLKTLGLLTLMAQSGLQIPAQEDSTIAVFEHVFADIGDEQSIEQSLSTF
                     SSHMTNIVSILGNVNQKSLILYDELGAGTDPQEGAALAIAILDASHAKGASVVATTHY
                     PELKAYGYNRVHATNASVEFNVETLSPTYKLLIGVPGRSNAFDISRRLGLSENIITEA
                     RSLVDTESADLNDMISSLEEKRNLAETEYEEARELARGADNLLKDLQKEISNYYQQKD
                     KLIEQASEKAATIVEKAEAEAEEIIHELRTMQLNGAAGIKEHELIDAKTRLGNAKPKT
                     INKTIPQAPKQKPHVFQEGDNVRVLSLGQKGTLLNKISDKEWNVQIGIIKMKIKTTDL
                     EYIQPEKPKKQRIITSVHSSGSPAKSELDLRGERYEDALQKVDKYLDEALLAGYPQVA
                     IIHGKGTGALRTGVTEYLKNHRMVKSIRFGAAAEGGNGVTIVEFK"
     gene            19267..19578
                     /gene="trxA"
                     /locus_tag="U0290_000879"
     CDS             19267..19578
                     /gene="trxA"
                     /locus_tag="U0290_000879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin"
                     /protein_id="HEM2300926.1"
                     /translation="MVKEITDATFEQETSEGLVLTDFWATWCGPCRMVAPVLEEIQEE
                     RGEALKIVKMDVDENPETPGSFGVMSIPTLLIKKDGEVVETIIGYRPKEELDEVINKY
                     V"
     gene            19654..21465
                     /gene="uvrC"
                     /locus_tag="U0290_000880"
     CDS             19654..21465
                     /gene="uvrC"
                     /locus_tag="U0290_000880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrC"
                     /protein_id="HEM2300927.1"
                     /translation="MSSEHIQNKLALLPDQPGCYLMKDRQGTIIYVGKAKILKNRVRS
                     YFSGTHDSKTQRLVQEIVDFEYIVTSSNVEALLLEINLIKKHDPRFNIRLKDDKTYPF
                     IKITNERHPRLIITRQVKKDKGKYFGPYPNVYAANEVKRILDRLYPLRKCSTLPNKVC
                     LYYHLGQCLAPCVFDVEASKYKEMQDEIVAFLNGGYKTVKNDLMKKMQEAAENMEFEK
                     AGEFRDQINAIETTMEKQKMTMNDFVDRDVFGYAIDKGWMCVQVFFIRQGKLIERDVS
                     QFPFYNDADEDFLTFIGQFYQKANHIPPKEIYLPDDVDSEAVQAVVPDTKIIVPQRGN
                     KKDLVKLAYKNAKIALNEKFMLLERNEERTVGAVERLGEAMGIPTPSRVEAFDNSNIH
                     GTDPVSAMVTFLDGKPSKNDYRKYKIKTVEGPDDYATMREVIRRRYWRVLKEELPMPD
                     LILIDGGKGQIDSAKDVLTNELGLDIPVAGLAKDDKHRTSQLLFGDLLEIVPLERNSQ
                     EFYLLQRMQDEVHRFAITFHRQLRSKTGFQSILDGIPGVGPGRKKKLLKHFGSMKKLK
                     EASVEEIKEAGVPLNVAEEVHKHITAFNEKAKNTEQK"
     gene            21646..22860
                     /locus_tag="U0290_000881"
     CDS             21646..22860
                     /locus_tag="U0290_000881"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEM2300928.1"
                     /translation="MGLVVLKFGGTSVSTVDKIGKTADQAIYEKKQGNKVIVVVSAMG
                     KSTDKLVAMAEEISEAPDKREMDMLLSTGEQITIALLAMTLKEKGHDAISYTGWQAGI
                     ETEAVHSNARIADIDSARIESALDAGQIVVVAGFQGFTTDGEITTLGRGGSDTTAVAI
                     ASALNAVKCAICTDVVGVFTTDPRYVKKAQKLEQITYDEMLELANLGAGVLHPRSVEY
                     AKNFRIPLEVRASHEQVPGTMIEEDLTMENTKVVRGIAFEDQITRVTIHWKQKEAMRV
                     SKVFTKLAENNIDVDIIIQGITGLGHGNLSFTIKTSALLATLAVLEESKELLQIEKLE
                     SEQDLAKVSIVGSGMVSNPGVAAQMFEALTENNIPIKMISTSEIKVSTVVPARKMVEA
                     AQVLHDQFELDK"
     gene            complement(22916..23410)
                     /locus_tag="U0290_000882"
     CDS             complement(22916..23410)
                     /locus_tag="U0290_000882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YslB family protein"
                     /protein_id="HEM2300929.1"
                     /translation="MVIMVYESGVSEMTENEQNKNEEKALVPSFGLDLLRDYLIPELL
                     GDEAPHIMYWAGKDLARKFPLASLEEVAEFFEEASWGNFSILKEKKDEMRLLLEGETV
                     AARFRTQEEPTFKLEAGFIAEQLQSQKKLYTESYDEIDKRKKQVTIIVKWDRKETIDN
                     EERY"
     gene            23558..24358
                     /gene="racE"
                     /locus_tag="U0290_000883"
     CDS             23558..24358
                     /gene="racE"
                     /locus_tag="U0290_000883"
                     /EC_number="5.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate racemase"
                     /protein_id="HEM2300930.1"
                     /translation="MKQAIGFIDSGVGGLTVVREVLKQLPHEQVYYLGDTARCPYGPR
                     DKEEVAKFTWEMTNFLVDRGIKMLVIACNTATAAALYDIREKLDIPVIGVIQPGSRAA
                     LKATRNNKIGVLGTLGTVESMAYPTALKGLNRRVEVDSLACPKFVSVVESGEYKSAIA
                     KKVVAESLLPLKSTKIDTVILGCTHYPLLKPIIENFMGDGVAVINSGEETASEVSALL
                     DYHNLLDATDEEIEHRFFTTGSTQIFKDIAKDWLNMPDMTVEHIKLGK"
     gene            24371..25117
                     /gene="rph"
                     /locus_tag="U0290_000884"
     CDS             24371..25117
                     /gene="rph"
                     /locus_tag="U0290_000884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease PH"
                     /protein_id="HEM2300931.1"
                     /translation="MRVDGRESNALRNIEVTPDYLMHPEGSVLIASGNTKVICSASVE
                     TKVPPFMRGEGRGWISAEYSMLPRATNTRNIRESSKGKVTGRTMEIQRLIGRALRAVV
                     DLDALGERTIWLDCDVIQADGGTRTASITGAFIAMVMAIAKLDEAVPFAKFPVKDFLA
                     ATSVGVLEEGGTVLDLNYVEDSAAQVDMNIIMTGSGAFVELQGTGEEATFSETELAEL
                     IALGKKGISELIEIQKETLGDKVTARIKGE"
     gene            25121..25732
                     /locus_tag="U0290_000885"
     CDS             25121..25732
                     /locus_tag="U0290_000885"
                     /EC_number="3.6.1.66"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XTP/dITP diphosphatase"
                     /protein_id="HEM2300932.1"
                     /translation="MSKIIIATANKGKAKEFEKIFAKFNIEVATLADFPEIGEIEETG
                     TTFAENAALKAETVASVLNQTVIADDSGLIVDALDGAPGVYSARYAGIAHDDAKNNEK
                     LLKNLEGVEPDKRTARFHCTLAVATPSEKTSFYTGEVEGVIAEQLCGTNGFGYDPLFF
                     LPEFGLTMAEIPAEKKNEISHRANAIKQLEKDLAEVVEKVTKK"
     gene            25769..26293
                     /locus_tag="U0290_000886"
     CDS             25769..26293
                     /locus_tag="U0290_000886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM2300933.1"
                     /translation="MKLLVVSDSHSERDCLIHLKEKYENTVDAMIHCGDSELEADDPA
                     IQGFHTVRGNCDFGGGFPNDWVGEVDGYRIFTTHGHLYNIKMTLMNLRYRARELNADF
                     AFFGHSHELGVDMLDDTIILNPGSISLPRGRIRVKTYALIDSTPEGIQVRFMDRDDNE
                     LTDLTQTFPLTKHN"
     gene            26404..26477
                     /locus_tag="U0290_000887"
     tRNA            26404..26477
                     /locus_tag="U0290_000887"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:26438..26440,aa:Arg,seq:tct)
BASE COUNT         9140 a         5006 c         5453 g         7058 t
ORIGIN      
        1 gtcaatcggg ccacaactta ctaaatataa gcaacataat atttattagt tactttctga
       61 tgatagatat ggtacaataa cgttagaggt gagaattatg actgatgcac atacagtatg
      121 tccgaagttt gaatcggcgt tccaattact aggtaaacgc tggactggac ttatcatcaa
      181 tgtcttactg actggtccaa aaaggtttaa acaagtcgcc gctgagatcc cgcaaatgag
      241 tgatcgggtg cttgcagaac gtttgaagga acttgaggaa atggatattt gcttaagaca
      301 agtttatcca gaaactcctg tacgcattga atatgaatta accgaaaaag ggaaagcact
      361 ccaagaagta atgcttgaag tccagtgctg ggcggataaa tgggtggaag tacctaatta
      421 aaaaagaaat aatctctcca accaatatgg agagattatt ttttagcttg aatctttcct
      481 agaaccatac tataatagaa actatctaaa taactaaaga caatgaaaga gccaagtagc
      541 atagtgagtc tgtataggga gaagtggtca tagactgaaa gccactttac aaacgaattt
      601 gtgaacattt cacctctgga gtcgcccccc gagaagcact ttatgtgtga aggtggtccg
      661 gttactaagc cgttatcgaa ttttgagtgg gaacaatttt ttgttcttat tagggtggta
      721 ccgcgagaag tctcgtccct ttgtggatag agctttttta ttttgtctaa aaagaaggag
      781 tgaacggtat gttagaacag ttacagacgc tgaaaaatga agcagaaacg caaattaacg
      841 aagcatcaga cttaaaaaca ttaaacgact tacgggtaaa ataccttggt aaaaaaggcc
      901 cgatgaccga aatcatgaaa caaatgggga aactttccgc agaagaacga ccaaaaatgg
      961 gttcacttgc gaatgaagta agaaccgcat taacagaagc aatttcaagc aaacaacaaa
     1021 ttttagaaac agaagcaatc aatgaaaaac taaaatcaga aaccattgac gttacattac
     1081 caggtactgc tccgagtatt ggaacaaaac acttgctaac acaagtaatt gaagaaatgg
     1141 aagatatgtt cattgggatg ggttacgaaa ttgcagaagg gccagaagta gaactagatt
     1201 actacaactt cgaagcgtta aatttaccaa aagatcaccc agctcgtgat atgcaagata
     1261 gcttctatat tacagaaaat actttactac gtacccaaac ttcacctgta caagcaagaa
     1321 caatggaaaa acatgacttc tctaaaggac caatcaaagt tatctgtcca gggaaagtgt
     1381 accgccgcga caatgatgat gcaactcact cccaccaatt tacgcaaatt gaagggctgg
     1441 ttgttggcga aaacatcacg tttgctgact taaaaggaac attaactgtt ctcgcaaaaa
     1501 caatgttcgg tgaagaacgt gaaattcgtc ttcgtccatc cttcttccca ttcacagaac
     1561 catccgttga aatggatatc tcttgtttca aatgtggcgg taaagggtgc cgcgtttgta
     1621 aaggaacagg ttggattgaa attttaggaa gcggaatggt acatccaaac gtgcttgaaa
     1681 tgtcgggaat tgattccacg cgttacagcg gttttgcttt cggcttagga cctgaacggg
     1741 ttgcgatgtt gaaatatgcg gtggatgata ttcgccacct ttatacaaat gatttacgct
     1801 ttacgaagca attccaaagt acagaaacgg gggaaatcta atgttagttt catataattg
     1861 ggtcaaagaa tttttccaag acttcccgtt aacggcggaa gagctaggag aagcaattac
     1921 aagaacaggt attgaaatcg aaggcgtaga agaattaagc gctagtttga aaaatgtcgt
     1981 agtcggcgaa gttttatcat gcgaacgcca ccccgatgca gagaaattga ataaatgtct
     2041 cgttcaaaca gacgaaacag aacctgttca aatcatttgc ggagctccaa acgttgccgc
     2101 tggtcaaaaa gtaatcgtag ccaaagttgg cgcaagactt ccaggtggac ttaaaatcaa
     2161 acgcgcaaaa ctacgcggcg aagtgtcaga gggaatgatt tgctccctgg ctgaacttgg
     2221 ctttgaaagc aaagttgtac caaaagcata cgcagaagga atttatgtat tacctgcgca
     2281 cgtggaaacg ggtgtaagtg caatcacttt acttggacta gatgatgcga ttttggatat
     2341 ggcaatcaca ccaaaccgcg cagatgcatt gagcatgaat ggtgtagctc acgaggttgg
     2401 tgcgattatt catcaaaaac cagcacaacc aaccgagcct gacgtatctg aaaaaggaaa
     2461 agcagacgat ttcatttctg tagaagttga aaatccagcc gaaacacctt actatgctat
     2521 taaaatggta gaaaacattg aaatcaaaga atcgccacta tggctgcaaa caaaactaat
     2581 gaaagctggc attcgtccac ataataacgt ggtcgatgtt accaactaca tcaatttatt
     2641 atacggacaa cctttgcatt cctttgacta tgataaaatt ggtagcaaga aaatcgttgt
     2701 acgttctgca aaagaacaag aagagattac cacgcttgat ggcgagaaaa gaactttaca
     2761 ggctggacat acagttatta caaatggcgt agaaccaatt gctatcgctg gcgttatggg
     2821 tggagaattt tccgaagtaa cagagaacac aacgacagta gcgctagaag gtgctatttt
     2881 cagcagctct tccatcggta aagcatctcg cgaattatac ctacgtacag aagcaagcat
     2941 ccgttacgac aaaggttctg acgcttggaa agtagaaaaa gcacttgcac atggcggagc
     3001 gttaatcgct gaactaagtg gcggaacact agtaggcggt gtcgtagaag tagataaccg
     3061 tgaaaaagct gtaaataaaa tcgaaacaag cctaacacgc attaaccgca ttttaggaac
     3121 agcaattacg cttgcggaaa tcgaaacaat ttttgatcgt ttaggttttg tattagaagt
     3181 gaaaaatgat actttaatca ttgaagtgcc gacaagacgt tgggacatca ctattgaagc
     3241 agatatttta gaagaagtag ctcgtattta cggttacgat gaaattccgg taacacttcc
     3301 tgcgacaagc acaacaggcg gcttatcaga cagccaaaaa gctcgtcgtg tcatgcgcgc
     3361 ttatttagaa ggagcaggac ttaaccaagc attaacttac tctttaacat ctaaaaaaga
     3421 tgcaactcgt ctagcgcttt ctgatgaaaa aacagttgca ttatcgatgc caatgagtga
     3481 agaacatagc catttaagaa caagtatcgt tccacaatta attcgtagcg caagttataa
     3541 catcgctcgt aaaaatatgg acgtggcact ttacgaaatg ggtaccgtgt tctacgcaac
     3601 agaaggggac aatttaccaa ttgaacaaga gcatttggca ggtctaatta ctgggaactg
     3661 gcatacggtt gattggcaaa aaacaccaaa accagtagac ttcttcgttt taaaaggaat
     3721 tgtcgaaggt ttagtgaaca aattaggtat caaatccgaa cttcactgga aacaaacaga
     3781 aaaagaagaa ctgcatccgg gaagaaccgc cagccttatt ttagaaggac aagaaattgg
     3841 ttatcttgga gcacttcacc cagcggtaga agctaactat gatttaaaag aaacatatgt
     3901 ctttgaaatc aatgtagctg ctttactaga tgcaaccaaa gaaaaagttg tgtaccatcc
     3961 aatcccacgt tacccagaaa tgactcgcga cttagcattg cttgtggata aaaataccga
     4021 ccatgcaaca atttctcaag taatccaaga gcacggcgga aagttacttg tcgatatcga
     4081 gctatttgat attttcgaag gggagagtct tggcgaaaat aaaaaatcgc tcgcatacac
     4141 attgactttc ctagatagcg aaagaacact agtcgaagaa gatgtacaaa aagcaaccaa
     4201 taaagtaata gaagcattac aagaaaaact acatgcgatt attcgctaaa tgaagaagaa
     4261 ctaggctagc tggaaaacat tttcaactag tttggttctt tttttgtttt ttataaaata
     4321 gtggaagtct ttcctttttt agtacttcac ttacttaaat aacacatgtt ataatgatgg
     4381 cacatgccag agaaaaaagg acgagaaaaa tgacctatgt agaaatgaaa gatgtatcta
     4441 aatactatca aatgggcgag aacgttgtca cggcaaatga taaaatcact ttcgggataa
     4501 aaaagggtga atttgttgta atagtcggac cttctggagc cggaaaatcc actgtactta
     4561 atatacttgg tggaatggat agtgcaagtg aaggcaaaat tatggtagat gggcaggata
     4621 ttgctcaata taatgcaaaa caattaacca aatatcggcg aacagatgtc ggctttgtat
     4681 ttcaatttta caatttggta cccaatttga ctgctaaaga gaacgtagaa ttagctgccc
     4741 aaattgcgcc aaatgcatta gacgcagaaa ctgttttaac tcaagttgga ttaagtcaca
     4801 gattagacaa ttttccagca caactatctg gcggggaaca acagcgtgtc gccatagcac
     4861 gtgcgcttgc taaagcaccg aaactgcttt tatgcgatga gccaaccggg gcacttgatt
     4921 acgatactgg aaaatcagtc ttaaaattat tacaagaaac ttgccgtaac acgggaacaa
     4981 ccgttattgt tattacccat aacacagcga ttacgccaat tgcagatcga attattgaaa
     5041 ttaataatgc aaaagttcgc agcatcaaag aaaatccaga accaatgtcg attgatgatt
     5101 tagaatggta ggaaggagca accagtgaaa cgttcagctt tatggaaaga tatttaccgc
     5161 gaaatatggc gttctaagag ccgctttatt tccattttta tgctgattat gttgggtgtt
     5221 gcttttttct ccggacttaa agcaactgga cccgatatgc ttctaacagc cgacaattat
     5281 tttaataagt atgaattagc taattttaac gtgcaatcta cttatggact agatgagacg
     5341 gacaaggaag cacttgaaga tatatctggt gtcgcacaag tggaactcgg atatacagca
     5401 gatactttaa tgaaagataa aaatatcgta acgaaactat tttccaattc tgaaagcgat
     5461 aatttaaatc aatacaagat agctagtggc cgtttaccag aaaaatcagg ggaaattgca
     5521 ctggatgaca atgaccttgt tcataaaaat gtcaaaatcg gcgacgaagt aacttttgtt
     5581 aaaagtgatg gaaataagtt aactaacacg ctaaaaaaat caacttataa agtagttggc
     5641 ttcgttagct caccagctta catccagaaa tctgaacgtg gctcgagcac ggttggaaaa
     5701 ggaaaaacag atgcctttgg tgtgattcca gaacaggatt ttgatttacc agaatacact
     5761 attgctaatc ttacttttaa caatttagca gcaaaacaag cttttagtga cgaatatgta
     5821 tccaccgaag aaaaagataa gaaaagcgtc gaaaaagctt tagcagacca accagaaaaa
     5881 agattaaata aaatcaagac gaaggaacaa aagaaattag acgatgcaac agcagaaatt
     5941 aacaaacgaa aagcagaact acaggaaaat gaagctaaac ttgcaaatgc caaagcacaa
     6001 ttagaagaag gattttctga atataatgct gccaaagcaa gctatgacgc caaaatcaag
     6061 catggcgaag cagagattgc aaacggtgaa gcagaacgaa gaagcgcaaa aaaacaactt
     6121 gataccgcaa aaacacagat tgaccaaggc gaaacagctc tttcacaagc tgagatggaa
     6181 ttagaagaag gtagagcggc ttgggaagat gccaataatc ttcttaatac agcaaatggt
     6241 tatttgcgaa gtgctaagtc gacattagaa aatgctttaa aacaaccaga tttaactgat
     6301 tttgagctag accggaacag cttaacaaat tcatttcaaa tgcttgcatc agaacttgat
     6361 ttatcaagtg cagagcgcgc tgaatatgaa aatgcgatga atcagttact agatgattat
     6421 gaaaatggca atattagtga tgcggaaatt agggaagcct taaacgcggc acttgcgcaa
     6481 gttggtaacg ctgaaaatga ataccaatcc gccagagcca ctttagacgc tgaaaaacaa
     6541 aaaatagaac aaggcgaaca aactttagct gcaaaaaaac aagaacttca acaagcaaaa
     6601 actgcctacc aagaaggtct tgctaaatat caagcaggtt tagaaaaaat ttcgcaagca
     6661 aaacaacaac tcgctgatgg aaaagaaaca ggttccacag aactacaaag cgcacttgct
     6721 aaattaaacg taggtcaagc ggaatacgaa aaaaatctcg ctttgtttga aaaagagaaa
     6781 gcaaaagcag aaggcaagct agctagcgcc gaaaaagagg ttaaaatcgg tcaagaaaaa
     6841 ctagatgcgc tcaaacttcc aaaatattat gtccttgatc gaaacgacaa tccaggctac
     6901 agcgaatata aagaaaatgc agatcgttta acctcgttat caaccgcatt cccaattttc
     6961 ttcttcctaa tcgctgcgct cgtttgtttg acgacgatga cgcggatggt agaggaacaa
     7021 agaacacaaa ttggaacgtt gaaagcattt ggttattcta atggtagcat tattttgaaa
     7081 tacctcgtat atggttctac cgcgagtata atcgggagcg ttcttggaat attaattgga
     7141 ttccagtttt tcccgaatat catttttaac gcctataaat cgatgtatga aatgccacca
     7201 gtggatattg gcttttactg gagctacagt ttgctatcct tatttgttgc gttattctgt
     7261 acaacattta ctgcttatgt agcttgtcgt gccgaacttc gcgccaatgc agcaacatta
     7321 atgcgtccca aagcaccaaa aattggcaaa cggattttct tagaacgaat tagttttatt
     7381 tggaaacgaa tgaacttcac aagcaaagtg actgcgagaa atttattccg ctacaaacaa
     7441 agaatgctca tgacggttct aggagttgct ggatgtaccg cattaattct tactggtttt
     7501 ggattacgga attcaattag tgacatcgcc aaaatgcaat atggccaaat tatgaaatat
     7561 gatgcagcta tttatcaaga catgagcgca ccaccagctg ccaaagaaac ctttgatgaa
     7621 ataatgaatg actccaatat caaaagcaag ttagctatgt ctcaaacaaa tattgagacc
     7681 gtaaaatcag gacaatcagc tcaaactaca tccattattg tccctaaaaa tttgaatgaa
     7741 ttaccagatt acattgtgct tcgcgaccgt gccagtcata caaccgaaaa actcaccgat
     7801 gatggtgcga ttattacgga aaaactagct aaattatttg acgtaaaacc aggcgataca
     7861 attaccgtca aaaacgctga gaatgacaaa ttccaaataa aagtcagtgc cattactgaa
     7921 aactatgcaa tgcactacat ttatatgaca aaatcatatt atcaacaagt atttaaagaa
     7981 aaacctacct acaatttaga cttattaatg ttaaaagata cctctgaaaa agtagagagc
     8041 aattttgcgg aaaaattaac agatagtaaa gccattttaa acgttacttt ttccaataat
     8101 gttagttcat tgttaaatga aactttggat agtctgaata ttgttatcgt ggtactcatt
     8161 acgtctgcgg cattacttgc gtttgtcgtg ctttacaacc tgacaaatat taatgtttca
     8221 gaacggatac gagaactttc tactatcaaa gtactcgggt tttatccaaa agaagtgact
     8281 atgtatgtct accgggaaaa tattatttta accttaatgg gcattgcggc tggatttgtc
     8341 cttggattct tcttgcaccg gtttatcatc accacagcag aggtagacca aatgatgttc
     8401 agtccggcaa ttagttggac aagctaccta ttttccggca tactcaccct cgtttttgca
     8461 actgttgtaa tggttgtcat gcacattaaa ctaaaacgaa tcgacatgat tgaagcactg
     8521 aaatcagttg agtgatgatg aaaagaactt gtttttatcg gcaagttctt ttcatttgac
     8581 ttaaaaataa ataaagctta aactgaaaaa tagttaaggg ggtgaacttt atttggaaag
     8641 acaaaaagta aaacaactga taaaaagtta ccaacaaaca tacatatttg cgatgaatca
     8701 aatacatcaa gctatttcag aaatttcagc aagtactgta gacctttcca ttgagcagtt
     8761 ttttgttttg cgtgagattg ctacctatga tggtattagc gcaacagaac tagcagccac
     8821 tttagcagta aataagagcg ctattacacc taaactgaaa aaattagaag aaaaaggcta
     8881 cattagacga gaacgaaacc aacaagataa acgcgccgta gttttaacta tctcagaaaa
     8941 agggaataac gtttacgaag aatgcgaaaa acaattagag ttactcgtga atgaatggct
     9001 cgaaatacta ggggaaaagg acagcgaaca attttttgaa ttatttcaaa agattaccaa
     9061 gtcggttgtt gagcctagac aataaaagga gagatttggc atgaaatgga ttatgaaact
     9121 ccgctgggcc attttagcat tttggcttgc agcagcagtc gtactaatga ttattgcacc
     9181 acccatggca gatcttgtac gcgaaaaagg cgaattaaag ctgcctgatg gctatccgtc
     9241 atcactagca acggaaatgc aaaagaaaca taatccagat gacaagggtt cagcttacat
     9301 cgctgtttat actgccgacc ataagttaac tggaacagaa ttaaacgata ttcaggattc
     9361 actcaactct atcgaaaaag ataaagacga acttcatgta acaaacgtgt tatctagttt
     9421 taaccaacca gaacttaaag ataagttctt atcaaaagat ggtaaaacaa tggtagcaag
     9481 tttaaccgta gatgatacgg atgcctcggt taaaagcata cgtaacgcat tagataagaa
     9541 aatggatgta aaaggtgttg atacgtattt aacaggtaat aaactaattc aagaagatgt
     9601 agttcaagga tctgaagacg gtttacataa aacagaaggc atcaccgttg tctttatttt
     9661 agttgtatta ttccttgtat tccgctcagc agtggcaccg tttattccac ttgtaacagt
     9721 gggaattagt tacctcgttg cgcaaagcac ggtagcattc ttaattgata tctttaattt
     9781 cccagtctct acatacacgc aaatctttat ggtttgtatt atgttcggaa ttgggacaga
     9841 ctattgtatt ctcttaatga gtcgatttaa agaagaaatg ggtgccggtc tcaatccacg
     9901 agaagctgtt catgcaacgt atcgtacagc aggaaaaaca gtcatttata gtggtgtagc
     9961 tgttctcgta gcatttactt cgctatattt tgtacaattt gatttatatc gttccgcagt
    10021 agcagtcggc gttgggattg tcgttttact tgccgcgctg tacacgctcg taccattctt
    10081 tatgagcaca ctcggaaccc atttattctg gccgttaaat aaaaatatta gccataaaga
    10141 aaataaaatt tggggcgctg ctggtaaatt cacttttgca agaccgtgga ttgctttatt
    10201 aatcgttgca gctatcacgt tgccgccaat cttattgcat acaggaacag aatcatttaa
    10261 ctcattagac gaaattagtg acaaatatcc ttccaaaaaa ggttttgaaa tcgtatcgga
    10321 cagtttcgga gcaggccaag tagcgccaac acaaattttt atcgaaaatg acgataatat
    10381 gcgaactaca gattacatcg cgcaaattga aaaaatttcc gatgatttat ctcatttaaa
    10441 aggcatcgat atggttatga gtgcctcacg tccagccgga aaacgggtag atgacattta
    10501 cattaaaaac caagccggac aagtaaatga cggtgttggt caagcaactg atggcgtagg
    10561 ggaagtgaaa aaaggactag attcagcaag ttcagaactc aaaaaatccg agcccgcctt
    10621 ggataaagct gttgcaggag tgagcgattt acaaaaaggc actgtcgcaa cacaagaagg
    10681 aattaaccaa ctacaaacag cactcgcaca aatccaaaca ggcattgaaa gcggagcaac
    10741 tggtgctggt gatttaaaac aaggcgtagc agaagccaaa tcacaactag ctacgttaca
    10801 aaatggagaa gcgcaaatcc aagcaggata cgtagaaatt cagaaaaacc tacaaaacgt
    10861 agctgaccaa ctaaaaggct ttgaagaccc tagctctcaa gcaattgata cttccaaact
    10921 tgaagagcaa ttcaaaaaaa ttggtgcttc tttccaagcg ttcgcagcag cgcatccaga
    10981 agtgagaaat gaccctcgtt tccaaaaact agccgcagat attcaaggct tagaaacagc
    11041 tggtaacgaa ctgaaaacct ctgctggaca acaaatggca gcacttcaag caaaaatgaa
    11101 agaactaaat caaggtattc aacaactcgc aacagcgatg aatcaattaa acgagcagtc
    11161 caaacaaatc tctgatggac ttagcgcttt tagtacagga cttggtcaaa tcgaaacagg
    11221 acttgatcaa ttagaaaaag gtctcaatca agccgcagat ggtcaaggac aagttgtttc
    11281 caaaatgccg gaaatctcta atgcactaac gcaaatcgct gctggacaag gtgccctaaa
    11341 agatggcttt gcaggcatta gcggtcaaat gggtcaatta acagatggct taacttctgg
    11401 cgcagacggc ctaggcaaag tagaaagtgg tctaaacaca gcgaacggac ttattgatga
    11461 ttggtcaaaa gttccttacg caagttccgg aatttatgta ccggatgctc tactaaaaaa
    11521 tgctgatttc caaaaagtat tagatcaata catctcttct gatggaaaac tggcaacgat
    11581 taatgtgatt ttgacgaaaa atccatattc caatgaagcg atggattcaa ttgatgacat
    11641 taatgaacaa ctctcagcta gcatgaaagg aacaaaactg gaaaatgcga aaattggtat
    11701 aggtggaatg acgagtgcca attacgatac gagagatatg tcaacagctg actatcattt
    11761 ggttcttgta atcgttctag cgagtgtttt cgtgacactt gttatcgtct tgcgttctct
    11821 agtaatgcca atttatctga ttgcatcact cgtattaacg tactttgctg cacttgggtt
    11881 cgcagaaatt atcttcatgc gaattcttgg atacagtggt ctaacgtggg caacaccgtt
    11941 cttcggattt gtagtactcg tcgcgctcgg tatcgattat tcgatcttct tgatgtcaag
    12001 atttaacgaa tacaacggac tttctgtacg cgatagaatg ataaaagcca tgaaaaatat
    12061 gggtggcgtt atcttctcag cggtcattat cctcggtgga acattcgccg caatgatgcc
    12121 agctggcgtg ctttccttac tcgaaattgc gacggtcgtt ttaatcggct tagtactcta
    12181 tgccgtcgtt attttaccac tcttcgttcc agtaatggtt aaactattcg gacgtggcaa
    12241 ctggtggcca tttattacaa gaaaaggcga ccatcaagaa aacgtaccac cgaaaaaata
    12301 acataataaa ccgcattcct ttaaaaaagg ggatgcggtt tttagtttgc ttccaaagac
    12361 tattttgcta agatatagtt agatgaatga aggaggaaaa aatcatgata aaactcggaa
    12421 atgactggga tgagttacta aaagatgagt ttaaccaacc gtattattta acccttcgcc
    12481 agttcctaaa aaaagaatac caaacgaaaa aagtatttcc ggatatgtac gacattttca
    12541 atgcgttaaa atataccgct tgtaaggatg tcaaagtggt aatactcggt caagacccat
    12601 atcatggacc aggtcaagca cacgggctct cattttccgt tcaacaagga gtgcagattc
    12661 caccatcact gcagaatatt tatttggaat tacataacga cttgaattgt gagattccaa
    12721 acaatggtta tttgatacgg tgggcagatc aaggagtgct actattaaat acggttctaa
    12781 ctgttcgcgc cggtcaagcc aactcacacc gaggacaagg ctgggaaata ctaacaaacc
    12841 gcattattga aatcattaac caaaaagaag agcccgtagt ctttttacta tggggaaaca
    12901 atgcgaaaga aaagttgcaa ttgttaacaa atccgaaaca tactgcgttt acatccgtac
    12961 atcccagtcc actctcagca tcgcgcggtt ttatgggatg caaacatttt tctaagacga
    13021 atcaattttt agaacaaaat ggtgtaaaac caattgattg gcaaattcct tctatataaa
    13081 taaaaacatc tcgccattta ttgacgagat gtttttttac tttttaacca tttttaatgc
    13141 tttctctgta ttagcgaaat gctgttttgt atatttcgct aatgtttcca gaccaaatcg
    13201 ttcgatgatt tccgctgcaa cagcatccac atgaggtcct gcgccttttg gaagtgggat
    13261 gccaacttct tttgacatcg catcaaaagc ttgcacaaat ttataacgag caataatcga
    13321 agcagcagcg acggaaagat gtaatccttc tgcttttgtc gcaaaaaaca catcttctcg
    13381 aataatgctt ggttcttttg ctaaatagcg ataatacgta tttttttcag caaattgatc
    13441 aattaaaatc gcttctggtt tgacaggtgc gagctttttc aagacgtttt caatcgcgcg
    13501 gttatgtagt aaagctttca tttgtccttg gttcatgcct cttttttgga gttcgttgta
    13561 tttaggatta gggcaaagca gcacactgtg cggaacaagt ggcatgattt tctcagcaat
    13621 acgacaaatt tctggatctt tcattgcttt cgagtccttt acacctagct cttttaacag
    13681 gggcatcatt tcggcgtcca catatgcggc acaaaccgta atcggtccaa aaaaatcacc
    13741 ggtgccaact tcatctgaac caatgacatt ttttgatgcg aagtttgccg gaagaattcc
    13801 tttagagacg gaaggtgctt ttgtttttga ttctggaaga gtcgccaccc atttttttgc
    13861 ttctacttct ccgtttactc cttggaacat cactttgcgc gacttgtagc cagtgatgga
    13921 aacaccggtt ttttttgcag cgaaaacagc tcctggtggt agctttggat tagaaaatgg
    13981 gagatatgtt tgtttcattt tttcaagtgt tggttgatcg actaagataa ctgtatttgc
    14041 gataaggcat catcctttca aagttctatt gtaacatact acgacgaaag actgaatatc
    14101 ggctaaacgg gtggttgact cttttctttc ctgctttttc gtgataagat tatgacaagt
    14161 agcggcctaa atgaatttgg gcgaggagga atatacgtgg caaatgagag aaataaagta
    14221 gtgacaacaa tttacggtag agaatatacg attgttggcg tagaaacaac agaccactta
    14281 cgtaaagtag ctcgcgaggt cgatgaaaaa atgcacgaaa tcggctccca aaatcatgca
    14341 ctagatagtg gtaggcttgc tgtactgaca gctgtgaatg cgacacacga ttacttaaaa
    14401 ctagaacaaa aatatctaga gttagagcaa gaactggctc gaattaaagg aagagattaa
    14461 tgattttaaa tgcgattatt ttaattttac ttgtttgcgg ctttttcgca ggatttagaa
    14521 caggccttat caaacaactt atcttattat taggttatat tttggcattt tttatctcgt
    14581 atacgtatta cgaagattta gcgccacatt taacgtttat accttatcca ggtagtgata
    14641 ctgcagatgg attatccatt attttacaag aattacgaac agaaacggcc tattataacg
    14701 tacttggatt tgcgattatt tttattgtcg caatcattgt cgttcatatg cttgcatcac
    14761 ttgttggtgg cttgactaag attccagtcc tgcgccaaat taatggattg ttagcagctg
    14821 tttttggtgt tgttaagtcc tacttaatta tttttgttgt cttgttcatc atggcaattt
    14881 acccggcgaa ttggtctgaa aaccttattg atagctcaac ggttgcccag tggatgcttg
    14941 aaaacacgcc aattttatcc gaacaatttt atgactggat gacagacatt ctgccaaaat
    15001 aaaagaaaca ttcgatacca gatgtatact cttagccaat tttggatagg atttctctgg
    15061 tattttttaa tgattttaca gggaggaata aagatggcta ctaataaaaa agaaattatt
    15121 cgtttactcg aagaaattgc cacttatatg gaattaaaag gagaaaatag ctttaaaata
    15181 tctgctttcc gcaaagctgc acaagcaatt gaattagata gtagaagttt atctgaaatt
    15241 gatgatttta cgaagattag tggcatcgga aaaacaacgg gcgaaattat ccaacgttat
    15301 ttagatagcg gagaatgtcc agaacttgag gcgcttaaaa aagaagtacc agctggtctt
    15361 gttccacttt tagatgtgcc agggctagga ggcaagaaat tatcgcgtct ttatcatgag
    15421 cttggtgtgg tggataaaga tacattactc caagaagcag aaaatggcca tatcgaagca
    15481 ttgaaaggtt ttggtaaaaa gtctgctgaa aaaatggccg aagcagtgcg cgaaatgggt
    15541 gagcgccctg atagatatcc gctaaatgat gttttaccaa tcattcaaaa agtagaagct
    15601 tatcttgcgg atattgctcc aatcgaaact tttgctcaag ctggaagtct acgcagattg
    15661 cgggaaacgg tgaaagattt agattatgtt attgcgacgg aaaaaccaga agaagttcaa
    15721 aaagcattac tggcatttcc attaattacg gacgttattg gagctggtga aacaaaagta
    15781 tcagctgtat tagaagataa tattaccatt tccgtggatt tccgtttagt agaaaagaaa
    15841 gcttttgcaa cgacactaca tcattttacg ggttctaaag atcacaacat caaaatgcgc
    15901 caattagcta aacaatccaa tgaaaaaata agtgagtatg gagtcgagca agaagatgga
    15961 agtgttcgtc actttgaatc ggaaaaagca tttttcgagc attttaagat tccgtttctc
    16021 ccacctgaag ttcgccgaga tggtacagaa attgagcgcg tgacgaaaga tacaaaattc
    16081 cttgagttaa gcgatattcg cggggacttg cacatgcata caacttggtc ggacggagcc
    16141 tacgcgattc cagaaatgat tgaagcatgt atcgcaaaag gatatgaata catggttatt
    16201 acagatcacg ggaaattttt gcgagtagct aatggtctgg acgaaaaaag attattggag
    16261 cagcaagcag aaattaaaaa aatagcagct aattatccgg aaattgatgt ttattccggc
    16321 gttgaaatgg atattctggc agatgggtcg cttgattttg atgatgagac tttgaagcag
    16381 ttggattttg ttatcgcatc catccattcc agtttccaac aatcagaaga agaaattatg
    16441 aagcgattaa aaacggcctg tgaaaatcca tatgtgcgtc tgattgcgca tccgacaggt
    16501 agaattgtcg tgaaaagaaa gccatatcat gttaatatga aagaactaat ccagttagcg
    16561 aaaaatacag gaactgccct agaattaaat gccaatccgc aacgtcttga tttaaaccgt
    16621 gagcatttag aaatggcaca cgctgccggg gtaccgattg cgattaacac agatgcgcac
    16681 gacacgaagc accttgattt catgtctatt ggcgttcgag ctgctacaaa agcctggctc
    16741 gacaaatcgg ccattctaaa tacgaaaaca gcagctgaat ttaaacattt tttacagaat
    16801 aaataacttt taaaaagaag gatgactaat ggaaaaaaaa gtagaagcca ttttagaatt
    16861 tgataaaata aaaaaacaac tcaccgaatt tgcttcttcg tcactggggg agcaagcgat
    16921 tttggaactc gctccagcaa ctgattttca agtagttcaa aaaacgcaac ttgaaacaga
    16981 agaaggagcc aagattattc gtttacgggg aagtgcgcca attactggtc taacagatgt
    17041 ttttgcacat ttgaaacgtt tagagattgg tggcgattta aacgggctag aaatttacca
    17101 aataggtagt aacttgcgcg ttagccgtca aatgaagaat tttatgaacg atttactgga
    17161 aatcggtgtc gaattgcctt tactcggcgc cctttcggat gaacttttag tactaaaaga
    17221 agtagaagag gatattgcga tttcagtaga tgaaagcggg aaagtgttag atactgcgag
    17281 tgaagcgctt agtacgattc gccgaacact ccgccgtacc gaagaccgcg tacgtgaaaa
    17341 actagaatct tatttgcgcg atcgtaatgc ctctaaaatg ttaagcgatg cggttattac
    17401 gattcgaaat gatcgttatg ttatcccagt taaacaagaa tacaaaggtc attatggtgg
    17461 tatcgttcat gaccagtctg cttccggtca aacgcttttc atcgagccac aaagtgtagt
    17521 ggatttaaac aacgaacgaa aagcacttca agcaaaggaa aaacaagaaa tagaacgcat
    17581 tcttgctgaa atttctgctt cactagctgc ttggattaat gaaattcatc ataatacttt
    17641 catcctcggg cgctttgatt ttattttcgc caaagcacgt ttcggaaaag cgatgaaagc
    17701 tgtaacgccg catttgagtg atgctggtgt cgtccattta atcgccgcac gccacccgct
    17761 tttagacgct gcgaaagttg tagcgaatga tatttattta ggcgaagatt tcactaccat
    17821 cgttatcacc ggtccaaata caggtggtaa aacaattacc ctgaaaacat tgggattact
    17881 aacactcatg gcacaatctg gacttcaaat tcccgcgcaa gaagattcta ctatcgctgt
    17941 ttttgagcat gtatttgccg atattggtga cgaacaatcc atcgaacaaa gtttaagtac
    18001 gttctcatct cacatgacga atattgtttc cattttggga aatgttaatc agaaatcgct
    18061 tattttgtac gatgaactcg gagcgggaac agacccacaa gaaggtgcgg ctttagcaat
    18121 cgccattctt gatgcaagcc atgcaaaagg tgcaagtgtt gttgcgacga cccattatcc
    18181 ggaactaaaa gcatatggat ataatcgcgt tcacgcaacc aatgcatctg ttgagttcaa
    18241 tgtcgaaaca cttagcccaa cttataaatt attaatcggt gtacccggtc gaagtaatgc
    18301 ttttgatatt tcacgccgct taggattaag cgaaaatatt atcactgaag caagaagcct
    18361 tgtcgatacc gaaagtgccg atttaaatga tatgatttcc agcctagaag agaaacggaa
    18421 cttagcggaa accgagtatg aggaagcacg tgaattagct cgcggggctg ataacctttt
    18481 aaaagattta caaaaagaaa tcagcaacta ctatcaacaa aaagataaat taatcgaaca
    18541 agcgagtgaa aaagcagcaa ctattgtgga aaaagccgaa gccgaggccg aagaaatcat
    18601 ccacgaattg cgcaccatgc aattaaacgg agcagcagga atcaaagaac atgaacttat
    18661 cgatgccaaa acaagacttg ggaatgctaa accaaaaaca ataaacaaaa ccatcccaca
    18721 agcgccaaaa caaaaaccac atgtattcca agaaggcgac aatgttcgtg tcctctccct
    18781 tggccaaaaa ggcacacttt taaataaaat tagcgataaa gaatggaacg tccaaatcgg
    18841 catcatcaaa atgaaaatca aaactactga cttagaatac attcaaccag aaaaaccaaa
    18901 aaaacaacgt atcatcacat ctgttcatag tagtggttca ccagctaaaa gcgaactcga
    18961 tttacgcggc gaacgatatg aagacgcgct acaaaaagtc gacaaatatc tagatgaagc
    19021 actactcgca ggatatcctc aagttgccat tatacacggt aaaggaactg gtgcccttag
    19081 aaccggggtc acagaatatc tgaaaaacca ccgcatggtc aaatcaatcc gttttggcgc
    19141 agcagcagaa ggcggaaatg gcgtaacgat tgttgagttc aagtaaacaa ctgagcaaaa
    19201 acatggctcc aaataggtct aggtgctata ctgtgtgtac gaaagtcata aggagtgaat
    19261 taaatcatgg taaaagaaat tacagatgca acatttgaac aagaaactag tgaaggctta
    19321 gtattaacag atttctgggc aacatggtgt ggtccttgcc gcatggtggc tccagtttta
    19381 gaagaaatac aagaagaacg cggcgaagca cttaaaatcg tcaaaatgga cgtagatgaa
    19441 aacccagaaa caccaggaag ctttggtgtg atgagtattc caacacttct tatcaaaaaa
    19501 gacggcgaag tagtagaaac aattatcggc taccgtccaa aagaagaact ggatgaagtc
    19561 atcaacaaat acgtttaaaa ttatgctaaa atgaaagaag cttagaacaa acattctaag
    19621 cttcttttta aatgtgtaac tggagttgat aaaatgtctt ctgaacatat ccaaaataaa
    19681 ctagcgcttc tgccggacca acctggttgt tatttgatga aagatagaca aggaaccatt
    19741 atttatgttg ggaaagcaaa aattttaaaa aatcgtgttc gatcctattt ttcaggaaca
    19801 cacgatagta aaacgcaacg cttagttcaa gaaattgtgg actttgaata tatcgtaaca
    19861 tcatccaacg tagaagcctt gctactagaa atcaatttga tcaaaaaaca tgatcctcgt
    19921 tttaatattc gcctaaaaga tgataaaact tatccgttta ttaaaatcac gaacgaacga
    19981 catccacgcc taattattac ccgtcaagta aaaaaagaca aagggaaata ttttggtcca
    20041 tatccaaatg tgtatgctgc taatgaagta aaacgtattt tagatcgact gtatccatta
    20101 cgtaaatgca gtacgctacc aaataaagtg tgtttgtact atcacctcgg acaatgcctt
    20161 gccccgtgtg tatttgacgt ggaagcaagt aagtataaag aaatgcaaga cgagatagtc
    20221 gcattcctaa atggcggcta taaaactgtc aaaaatgatt taatgaagaa aatgcaagaa
    20281 gcagctgaaa atatggaatt cgaaaaagcg ggtgaattcc gcgaccaaat caacgcaatc
    20341 gaaacaacaa tggaaaaaca aaaaatgacg atgaacgatt tcgttgaccg tgatgtcttt
    20401 ggttatgcca ttgataaagg ctggatgtgc gtccaagtat tcttcattcg tcaagggaaa
    20461 ctaattgagc gcgatgtctc ccagtttcca ttttataatg atgcagatga agatttcctc
    20521 acatttattg gtcaatttta ccaaaaagcc aatcatattc cgcctaaaga aatttattta
    20581 ccagatgatg tcgatagcga agccgttcaa gcggtcgttc ctgacacaaa aatcatcgta
    20641 ccacaacgcg gaaataagaa agatctcgta aaacttgcat acaaaaatgc gaaaattgcc
    20701 ttaaacgaaa aatttatgct acttgaacgt aatgaagaac gcacagtcgg agcagttgaa
    20761 cggcttggag aagcaatggg aatcccaaca ccgtcacgcg tcgaagcttt cgataactcg
    20821 aatattcacg gtacagaccc agtttccgcg atggtcacat tcctcgatgg caaaccaagt
    20881 aaaaatgatt accgtaaata caaaatcaaa accgtagaag gacctgatga ttacgcaaca
    20941 atgcgcgaag ttattcgacg tcgttactgg agagtactta aagaagaact accaatgccg
    21001 gatttaatct taattgatgg tggtaaaggg caaattgata gtgccaaaga tgtcctaacg
    21061 aatgagctag gcttagatat tccagtagca ggacttgcaa aagacgacaa acaccgtact
    21121 agccaactat tattcggtga cctacttgaa atagtcccac tcgaacgaaa cagccaagaa
    21181 ttctacctat tacaacgaat gcaagatgaa gtccaccgtt tcgctattac attccaccgc
    21241 caacttcgca gcaaaacagg cttccaatcc attcttgacg gcatcccagg agtaggaccc
    21301 ggtcgcaaga aaaaattact taaacacttc ggctccatga aaaaattaaa agaagcatcg
    21361 gtagaagaaa ttaaagaagc cggtgtccct ttgaatgttg cagaagaagt gcataaacac
    21421 atcacagcat tcaatgaaaa agcaaaaaat accgagcaaa aatgattttc aacacgattt
    21481 taaacgccaa taactttgat gttattggcg ttttattgca taaaaattgt tactaacatg
    21541 tcagattaaa tagcttttac atataataaa cttcccttca acacataaat gcgctaaaat
    21601 ataaacattg ataaaaaaga actaacaagg caggagggaa cgagattggg actagtcgta
    21661 ttaaaatttg gcggaacatc agtgagcacg gtggataaaa tcgggaaaac agcagatcaa
    21721 gccatttatg aaaaaaaaca aggaaataaa gtcatcgtcg tcgtttccgc aatggggaaa
    21781 tcaaccgaca aattagtcgc gatggcagaa gaaattagcg aggcaccaga taaacgcgaa
    21841 atggatatgc ttctttctac tggtgagcaa atcacaattg ctttacttgc gatgacatta
    21901 aaagaaaaag ggcacgatgc tatatcctat acaggatggc aagcgggaat tgaaacagaa
    21961 gccgtacata gtaatgctag aattgccgat attgatagcg ctcgtattga atctgcgctt
    22021 gatgcgggac aaattgttgt tgtagcaggt tttcaaggtt tcacgacaga tggtgaaatt
    22081 actacattag gacgaggtgg atcagacaca accgccgtcg ccatcgcttc tgctctaaat
    22141 gccgtaaaat gcgcgatttg tacggatgta gtcggtgtat ttacgacaga tccacgctac
    22201 gtgaaaaaag cccaaaagtt agaacaaatc acctatgatg aaatgttaga attagctaat
    22261 ctcggtgccg gtgttttaca tccacgctcc gttgaatatg ccaaaaattt ccgaattccg
    22321 cttgaagtca gagcgagcca cgaacaagta ccaggaacaa tgattgagga ggatttaaca
    22381 atggaaaata ccaaagtagt ccgtggaatt gcttttgaag accaaatcac ccgtgtaact
    22441 atccactgga aacaaaaaga agcaatgcga gtttctaaag tctttacaaa attagcagaa
    22501 aataatattg atgtagatat tattatccaa ggaattactg gactaggtca cggtaatcta
    22561 tccttcacta tcaaaacaag cgcactctta gccacactag cagttttaga agaaagcaaa
    22621 gaattacttc aaattgaaaa actagaatcc gaacaagatt tagcgaaggt gtccattgtt
    22681 ggctctggaa tggtaagtaa tccaggtgta gctgcacaga tgtttgaagc tttaacagaa
    22741 aataatattc caataaaaat gattagcaca tcagaaatca aagtttccac tgtcgtacca
    22801 gcgcgcaaaa tggtcgaagc agcccaagtt ttacatgacc aatttgaact cgataaataa
    22861 aaataagctt gtagcatcaa agaggatttc tctttgttac tgcaagctta ttgttttaat
    22921 agcgttcttc gttatcaatc gtttctttac gatcccattt aacgataatg gttacttgtt
    22981 ttttacgttt atcaatttca tcgtagcttt ctgtatacag cttcttctgt gattgcaatt
    23041 gttctgcaat aaagccagct tctagtttaa atgtaggctc ttcttgtgta cggaaacgag
    23101 cagcaactgt ttcaccttct aaaagtaaac gcatttcatc tttcttttct ttcaaaatgc
    23161 taaaattacc ccaagaggct tcttcaaaaa attctgctac ttcttctaga gacgctagtg
    23221 ggaatttacg tgccaagtct ttccccgccc agtacataat gtgaggtgct tcatctccaa
    23281 gtagttcagg aattaaataa tcgcgtagta aatctaaacc aaaacttgga acgagagctt
    23341 tttcctcgtt tttattctgt tcattttctg tcatttcgga taccccactt tcatacacca
    23401 ttataaccaa aatcacccta aaatggaaag cacaataaat aaatttccac aaaaaagctt
    23461 ttttctcaaa aaagacttgc gaaaaagctc aaaaaataag aaaatggaag gtatagataa
    23521 aaaaattgga aattaataaa gaaattgagg cgagactgtg aaacaagcta ttggctttat
    23581 tgattcggga gtaggcggtt tgacagtagt gcgagaagtg ctaaaacagc taccccatga
    23641 acaagtatat tatttaggtg ataccgcacg ttgcccttat ggaccacgcg ataaagaaga
    23701 agtagctaag tttacttggg aaatgaccaa ttttctagta gaccgtggca tcaaaatgct
    23761 cgttattgca tgtaataccg caacagcagc agcattatat gatattcgtg aaaaattgga
    23821 tattcctgtg attggtgtaa tccaaccagg ttcaagagca gctctcaaag caacaagaaa
    23881 caacaaaatt ggcgtattag gaacacttgg tacagtcgaa agcatggctt acccaacagc
    23941 gctcaaagga ctaaaccgcc gagtagaagt agattcactg gcatgtccga aatttgtatc
    24001 cgttgtagaa tctggcgagt ataaaagcgc cattgcaaaa aaagtagtag ccgaatcact
    24061 cttaccactg aagagtacca agattgatac ggtgattttg ggttgtacgc attacccact
    24121 tttaaaacca attattgaga attttatggg agacggcgtt gctgttatta actccggaga
    24181 agaaactgct agtgaagtta gcgcgttact ggattaccat aatttattag atgctacaga
    24241 cgaagaaatt gagcaccgtt ttttcactac gggctcgaca caaattttca aagatattgc
    24301 aaaagactgg ttaaatatgc cagatatgac tgtagaacat attaaattag gaaaataaga
    24361 ggtgccaata atgagagttg atggaagaga aagtaatgca ttacgaaata ttgaagtaac
    24421 accagattat ttaatgcatc cagaaggttc tgtgctaatt gcatcaggaa atacaaaagt
    24481 tatctgttct gcaagtgtag aaacaaaagt gccaccattt atgcgaggag aaggccgcgg
    24541 ctggatttct gcagaatact cgatgttacc acgagcaaca aacacccgaa atatccgtga
    24601 atcttcaaaa ggtaaagtta ctggcagaac aatggaaatt cagcgtttaa tcggacgtgc
    24661 gctccgtgct gttgttgatt tagatgccct tggtgaaaga acaatttggc tcgattgcga
    24721 cgttatccaa gcagatggag gtactcgtac ggcttctatc accggcgcat ttatcgcgat
    24781 ggtcatggca atcgccaaac tagacgaagc tgtaccattt gctaaatttc ctgtcaaaga
    24841 tttcctagca gcaactagcg taggtgtttt agaagagggt ggaacagtac ttgaccttaa
    24901 ctacgtagaa gacagcgcag cgcaagtaga tatgaatatt atcatgacag gtagcggcgc
    24961 ctttgtagaa ctccaaggaa ctggcgaaga agctacattc tcggaaacag aactggctga
    25021 actaattgcc ttaggtaaaa aaggaattag cgaattaatc gaaatccaaa aagaaacact
    25081 cggagacaaa gtcacagcgc ggattaaagg agaataaaaa atgagtaaaa ttattatcgc
    25141 taccgcaaac aaaggaaaag caaaagaatt cgaaaaaatc tttgcgaaat ttaatatcga
    25201 agtagcaacc cttgctgatt ttccagaaat tggtgaaata gaagaaactg gaacaacctt
    25261 tgccgaaaat gccgctctta aagcagaaac ggtcgctagc gtgttaaatc aaaccgtcat
    25321 tgctgatgat tctggtttaa tcgtagacgc gcttgacgga gctcctggcg tctattccgc
    25381 acgttatgca ggtatcgctc acgatgatgc caaaaataac gaaaaactac ttaaaaactt
    25441 agaaggtgtt gaaccggaca aaagaacggc tcgtttccac tgtacacttg ctgtagccac
    25501 accttctgag aaaacatctt tttataccgg tgaagtagag ggcgttatcg cagaacaact
    25561 atgcggcaca aatggctttg gctatgatcc actatttttc ttaccagaat tcggtctaac
    25621 aatggcagaa attccagcgg agaaaaagaa tgaaatcagc caccgtgcta atgccattaa
    25681 acaactagaa aaagatttag cagaagtagt agaaaaagta accaaaaagt gagaaaataa
    25741 gtaacagtat cacgggggag gaaacaaaat gaaattatta gtagttagcg acagccactc
    25801 agaacgtgac tgcttaatcc atcttaaaga aaaatacgaa aatacagtcg atgcgatgat
    25861 ccattgtggg gattctgaat tagaagctga cgatcctgcg attcagggat ttcatactgt
    25921 tcgaggcaac tgtgactttg gcggcggttt tccaaatgat tgggtgggag aagtagacgg
    25981 ctaccgcatt ttcaccacac acggacatct ctataacatc aaaatgacac tcatgaattt
    26041 acgatatcgc gcacgtgaat taaacgcaga ttttgccttt tttggtcact cgcatgaact
    26101 aggagtagac atgctagacg acaccatcat tttaaaccca ggaagcattt ccttaccaag
    26161 aggacgcatc cgtgtcaaaa catacgctct tatcgattca acaccagaag gcattcaagt
    26221 tcgattcatg gaccgggacg acaacgaact aacggaccta acccaaacct tcccattaac
    26281 gaagcataac taggtcaaaa gacacccgaa aaagaaaaaa tgcaataact taaagaaaac
    26341 cattgacaaa caagcgattt aaacataaaa tggtatttgg ctgttgaaaa aacagtgcca
    26401 tttgtcctga tagctcagct ggatagagca acggccttct aagccgtcgg tcgggggttc
    26461 gaatccctct caggacgtaa atagctatat taaagaaatc tctaaaacgt tgaaaaacct
    26521 tgatattaaa ggttggatgg atgttttaga gattttttta tatcttataa tatctgtttt
    26581 attccgtatt tttcatgaca tttgtgacaa aatttgtgct atttccatcc atttttaatg
    26641 tgaaaaaagc atctatt
//
LOCUS       DASDYO010000024        26159 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.024, whole genome shotgun sequence.
ACCESSION   DASDYO010000024 DASDYO010000000
VERSION     DASDYO010000024.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 26159)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 26159)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..26159
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.024"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(67..444)
                     /gene="fxsA"
                     /locus_tag="U0290_000888"
     CDS             complement(67..444)
                     /gene="fxsA"
                     /locus_tag="U0290_000888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein FxsA"
                     /protein_id="HEM2300934.1"
                     /translation="MRKFILYWALYGLIELIMYVWLFQVIGFWPLLFIQAASSAFGVF
                     IFKRLGGNLFRNLRDGRTVAPYLLDSLCFFIAGFLLIIPGVITTILGLLIFIPFSRKL
                     LKPKLTKWLGNQKKHTQYYYFDM"
     gene            complement(563..2320)
                     /gene="pyk"
                     /locus_tag="U0290_000889"
     CDS             complement(563..2320)
                     /gene="pyk"
                     /locus_tag="U0290_000889"
                     /EC_number="2.7.1.40"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate kinase"
                     /protein_id="HEM2300935.1"
                     /translation="MKKTKIVCTIGPASESVDTLVQLIEAGMNVARLNFSHGDFEEHG
                     ARIVNIREASKKTGKQVAILLDTKGPEIRTNDMVGGKLEFQTGDVVRVSMTPVEGTKE
                     KFSVTYGELYDDVEIGSSILLDDGLIGLEVIEKDEANRELVTKVLNPGVLKNKKGVNV
                     PNVSINLPGITEKDAADIRFGLEQGIDFIAASFVRRATDVLEITKILEEHNATHVQII
                     PKIENQEGVDNIDEILQVSQGLMVARGDLGVEIPAEEVPIVQKELIRKCNKLGKPVIT
                     ATQMLDSMQRNPRPTRAEASDVANAIFDGTDAIMLSGETAAGDYPVEAVKMMAKIAVR
                     TEEVLVAQDKFALKLHENTDMTEAIGQAVGHTAKNLNVQTIVAATQSGHTARMISKYR
                     PKSHIVAVTFNEHVYRGLALSWGVYPRLATPVSNTDEMFDLAVKESLASGVAKQGDLI
                     IITAGVPVTESGTTNVMKIQLIGEKVVKGQGIGSKSVIGKAIVAKSNAEALEKAEEGG
                     ILIVKTTDKEMLPAFEKSAAVVVEEGGLTSHAAVVGINLGIPVIVGAKDATSLVKDGE
                     IITVDSRQGVVYNGKTATH"
     gene            complement(2603..3562)
                     /gene="pfkA"
                     /locus_tag="U0290_000890"
     CDS             complement(2603..3562)
                     /gene="pfkA"
                     /locus_tag="U0290_000890"
                     /EC_number="2.7.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phosphofructokinase"
                     /protein_id="HEM2300936.1"
                     /translation="MKRIAILTSGGDAPGMNAATRAVVRKAIYEGLEVYGINYGFLGL
                     VNGDIRKLELGSVGDLLHRGGTFLYSARYPEFATEEGQLKGIEQLKKHQIDGLVVIGG
                     DGSYHGAEALTKRGFPTIGIPGTIDNDISGTDFTIGFDTALNTVLDALDKIRDTATSH
                     ERTFIIEVMGRDAGDIALWSGLAGGAEAIIVPEESFNMDDVVDRLNKGRERGKKHSII
                     VVAEGVMSGNEFAKQLAEYGDYHARVTVLGHVQRGGSPTAFDRVLASRLGARSVELLL
                     ENRGGLAVGIRENRIVENDISEILKEKHTLDQKLFDLASILSI"
     gene            complement(3847..4803)
                     /locus_tag="U0290_000891"
     CDS             complement(3847..4803)
                     /locus_tag="U0290_000891"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465097.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit alpha"
                     /protein_id="HEM2300937.1"
                     /translation="MANEMEFEKPILELKSKIADLKEYNETSDVDLTNEIEKLEKRLA
                     KLESSIYSNMTAWDKFQVARHPERPTTLDYISLLFEDFMELHGDRAFGDDAAIVGGIA
                     TFHGIPVTVIGHQRGKDTKDNLHRNFGMPHPEGFRKALRLMKQADKFGRPIICFIDTK
                     GAYPGRAAEERGQSEAIARNLYEMSDMKVPIISIVIGEGGSGGALALGVGNQIFMLEN
                     AVFSVISPEGAAAILWKDASQAKKAAESMRITAGDLFELGITDGIIPEVKGGAHRDLN
                     AQAEEINKTITKSLHALMAFSEEQLIEQRYEKFKKIGVYDTL"
     gene            complement(4793..5677)
                     /locus_tag="U0290_000892"
     CDS             complement(4793..5677)
                     /locus_tag="U0290_000892"
                     /EC_number="6.4.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetyl-CoA carboxylase carboxyltransferase
                     subunit beta"
                     /protein_id="HEM2300938.1"
                     /translation="MLGDLFTKPKKRKYATIPSDGTKADVPEGIMTKCPECKKIMYTK
                     ELQKNLMVCNYCGFHHPIGAKARIDMLVDEGSFEEIDASLTTANPLGFEDYMDRIEKD
                     KQKSGLNEAIVTGHATIDGNPLVIAVMDSRFRMASMGSVVGEKIFRAVEDADKTNKPF
                     VIFTASGGARMQEGMLSLMQMAKTSAAFKRFSNHGGLIITVMTHPTTGGVSASFASLG
                     DYNFAEPGALIGFAGRRVIEQTVREELPEDFQTSEFLLKHGQLDDCISRLDLQNKLSF
                     ILSIHVKTPEVGGEADGE"
     gene            complement(5895..9221)
                     /gene="dnaE"
                     /locus_tag="U0290_000893"
     CDS             complement(5895..9221)
                     /gene="dnaE"
                     /locus_tag="U0290_000893"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEM2300939.1"
                     /translation="MGFVHLQVASAYDLLSSTASIDKLIAKAKEYHYPALAITDKNVL
                     YGVVEFYQKCLAADIKPIIGMTVTIQGYLNPINSYELILIAESTAGYHELLKIASAIQ
                     TREEGPELPQSWLRAYSSNLIAISPGAKGEIERLLMEENREGALEVYANLVEIFGKES
                     VYLSAQKENPRLFTKIETFSAEENVPVVATKNVQYIEPKDAQAKEVLTAIRDNRTVDW
                     TTLPLAGPNYFTSQEDMERDWQTEFEKRACLETGELADRCHVEIALDQHLLPRFPLNE
                     GQNASDVLRQTAFAGLKERNLLGVEYQERLEYELKVITEMGFADYFLIVWDVIRYSRE
                     AGILTGPGRGSAAGSLVSYALRITDVDPIRYNLLFERFLNPERITMPDIDLDFPDNRR
                     DEVISYVVSKYGEAHVAQIGTFGTLAAKAAIRDTARSFGLNSVLLSEWSKLIPSQLGI
                     TLQKALQESPRLENHIKSSKENEMIWEVACQLEGLPRHISTHAAGIVISDKPLVEQVA
                     LQLGSGDARLTQFAMGELEKIGLLKMDFLGLRNLSLLDRVLKSVNYTRETPLTLADIS
                     LEDKKTLKLFQTGDTTGVFQFESDGIRRVLRKLKPTSFEDVVAVDALYRPGPMEQIDT
                     FIARKHGKEKIQYPHPDLAPILEVTYGVIVYQEQIIQVANQMAGFSLGEADLLRRAVS
                     KKKADVLNEERIHFVEGAKSRGYSDASANQVYDMIVQFANYGFNRSHAAAYSKIAFQL
                     AYLKAHFPAAFMSSLLSSVFGNDDKISQYITEAKNYGISMLAPSINHSNYYFQVENES
                     SIRYSFRVIRKVPTKFILEIINERKKAPFRDFFDFCERMPHKMLSETVLEALVFSGCF
                     DEFGEDRATILATIDAVLQYISLLGEDSKGMNLFAEDDDFLKKMKPRYRKTAPISIDE
                     KLEKEKLYTGQYVSAHPVSYYQNKLQNLAITRLANLSSGKNYQVAAYVHEVKSIRTKK
                     GETMCFLTISDDSKELSAVMFPESYRKFASFAQKGEILFLQVKADTRNGELQLIINKA
                     EDLKEIKAPVRLFLKLTEPQQMEQIKPVLTRYKGDSKVIVHQAITKQTAELKNIQVTP
                     SNELQEALEELLGKENVVIK"
     gene            complement(9343..10278)
                     /locus_tag="U0290_000894"
     CDS             complement(9343..10278)
                     /locus_tag="U0290_000894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional oligoribonuclease/PAP phosphatase
                     NrnA"
                     /protein_id="HEM2300940.1"
                     /translation="MKSEILQQIKQYETIILHRHVRPDPDAYGSQMGLAEIIRASFPE
                     KKVYSVGNDEKSLQFLGIVDEITDEIYKDALVIVCDTANQERISDGRFNLGKALIKID
                     HHPNDDAYGDLLWVDTTASSCSEMIVAFWEMFSDELILNETAARLLYAGIVGDTGRFL
                     YPSTTEETLRLSAHLVTFPFDRPALYRELYELPKNTVKLSGYILQNFVMDENGAATVY
                     LSDTLLNEFEVDPRDASALVSCIENVEGIKAWIMFIQEGPVFRARLRSKGPVINELAK
                     EYGGGGHPLASGATLHNEEEIKEMTAKLQRICADK"
     gene            complement(10299..11612)
                     /locus_tag="U0290_000895"
     CDS             complement(10299..11612)
                     /locus_tag="U0290_000895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEM2300941.1"
                     /translation="MATKHEQILKYIENLAVGEKISVRKIAKNLSVSEGTAYRAIKDA
                     EIIGFVSTIKRVGTLRIERKQKDSIEKLTFAEIVNMIDGQVLGGRAGLYKSLNKFVIG
                     AMTVEAMERYTDAGNLLIVGNRVSAHELALKRGAAVLITGGFDTDDEVKRLADEKELP
                     ILSTSYDTFTVATMINRAIYDQLIKKEVVFVEDILTPLETTAFLSTSDKVEDWHKMEE
                     ATGHSRFPVVNRAMRLTGMVTSKDILEKNPSISIERVMTKNPLTVGPKMSVASVAHMM
                     IWESIEVIPVVKDDLTLIGIVSRQDILKSMQMIQKQPQVGETIDDTIANQLSEKADTG
                     EEADYEFKVSPQMTNSLGTLSYGVFTQVVCDVVQQKLFSMKKRNVAIENVTMYFLKPV
                     QMDATIIIKPRILEMGRKAGKLDVELYLEGILTGKAIVACQMMER"
     gene            complement(11638..12324)
                     /locus_tag="U0290_000896"
     CDS             complement(11638..12324)
                     /locus_tag="U0290_000896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEM2300942.1"
                     /translation="MKISFHGQSCIKIITGDTTILVDPFISGNEKCDLKAEEQMPDFI
                     VLSHGHDDHVGDTVEIAKNSGATVICNADLASFLAVEDGLENIAPMHIGGKRQFSFGQ
                     VKLTQAFHGSQTVRDGRIVNLGFPTGIVFTIEDKNIYFAGDTGLFSDMKLIGELNPLD
                     VAFLPIGDNFTMGPEDAAIAARFLQAKLVVPMHYNTFPLIAQDPHKFVASLDEGITGK
                     VLEIGEGIEI"
     gene            12489..13586
                     /locus_tag="U0290_000897"
     CDS             12489..13586
                     /locus_tag="U0290_000897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase P family protein"
                     /protein_id="HEM2300943.1"
                     /translation="MEKNIDVLQNWLKDQGAEVAFLTDPENIAYFSGYHSEPHERVLG
                     LAVFPDSEPFLFTPALEVEDVRGGDWTHPAYGYNDTENPFTIIADEIKKRVANPSKFA
                     IEKKHMSVDRYEQLGGLFSGSSFIPIEHKIEQIRLIKTEAELKILKEAALLADYAVQV
                     GVNEIAEGKTEAEIVAKIEYEMKKKGVTAMSFDTMVLTGKNGALPHGTPGETKIKKGD
                     LVLFDLGVVHKGYCSDITRTVAFGDISDEQKKIYDTVLEAQIAAVEKVKDGVKASEID
                     LTARNIIREAGYGDYFPHRLGHGLGASVHEFPSITETNNMELQENMVFTIEPGIYVPG
                     VAGVRIEDDLVVTKDGVQVLTEFPKTLQVID"
     gene            complement(13629..14741)
                     /gene="ald"
                     /locus_tag="U0290_000898"
     CDS             complement(13629..14741)
                     /gene="ald"
                     /locus_tag="U0290_000898"
                     /EC_number="1.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine dehydrogenase"
                     /protein_id="HEM2300944.1"
                     /translation="MLVGVPKEIKNNENRVAMTPASVFSYVNAGHTVYVEKDAGIGSN
                     YQDADFVQAGAKIVETAKEAWDVDMVVKVKEPIASEYTYFKEGLLLFTYLHLANEPTL
                     AKALMESKVNSVAYETVELADHTLPLLSPMSEVAGRMAAQIGAQFLQRTNGGMGVLLG
                     GVPGVEKSEVVIIGGGIAGTNAAKIAAGLGANVTILDMNLKRLRELDDIFGNQVQTLM
                     SNDFNIETAVKKADLVIGAVLIPGAKAPKLVKEHVIKQMIPGSVLVDIAIDQGGIFET
                     TDHVSTHDNPTYEKYGVLHYAVANMPGAVPRTSTLALTNATLPFGLKLANQGLKAAVQ
                     NDPFLLRGLNTYQGHITYKAVADSLDLPYTDSKELI"
     gene            14980..15444
                     /locus_tag="U0290_000899"
     CDS             14980..15444
                     /locus_tag="U0290_000899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEM2300945.1"
                     /translation="MLQQYERVLVAVDGSKEAERAFQKAIQVANRNDAALGLVHVIDT
                     RAFSSVANYDTSMADKATEYADELLSGYKEDALKAGVTKVESYIEYGSPKTAITKEAA
                     KAFQADLIMCGATGLNAVERLLIGSVSEYIIRHSPCDVLVVRNDVPDYKEEK"
     gene            complement(15496..16689)
                     /locus_tag="U0290_000900"
     CDS             complement(15496..16689)
                     /locus_tag="U0290_000900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003741223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetate kinase"
                     /protein_id="HEM2300946.1"
                     /translation="MEKTIAINAGSSSLKFQLYDMPSERVITAGIVERIGLKDSIFTI
                     TVDGEKIKEIIDIPDHEIAVQMLLEKLINHKVIGSYDEITGIGHRVVHGGERFPESVY
                     IDDQVIKDIEALSELAPLHNPANVTGIKAFRKILPDVVSVAVFDTAFHQTMPPASYLY
                     SLPYSYYEDYGIRKYGFHGTSHKYVSERAAELLGRPVEELRLLTCHLGNGASIAAIEG
                     GKSMDTSMGFTPLAGVSMGTRSGNIDPALIPFIMEKTGKTAEQVLDVLNKESGMLGVS
                     GISSDLRDLEDEAAKGNDRAELALQVFVDRIHKYIGSYAARMNGVDAIIFTAGIGENS
                     SYIREKVLRGLEFMGVYWDPALNQVRGEERFLNYPHSPVKVIIIPTNEELMIARDVET
                     IKNNH"
     gene            complement(16713..17711)
                     /locus_tag="U0290_000901"
     CDS             complement(16713..17711)
                     /locus_tag="U0290_000901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2300947.1"
                     /translation="MANEATQELFQVLDNTAIILQNELEISYLEAVYETGENLFQKEV
                     LQKEELSSEKQLKLQASYESIELENFSNEEIRKGLQLALLKGMKHGIQVNHQMTPDSI
                     GFIVAYLLEKVIQKKKNVSILDPACGTANLLTTVINQLELKGDVDVHASGVDVDDLLI
                     SLALVGADLQRQKMTLLHQDGLANLLVDPVDVVISDLPVGYYPDDENAKTFELCREEG
                     HSFAHFLFIEQGMRYTKPGGYLFFLVPDAMFGTSDFAKVDKFIKKNGHIEGIIKLPET
                     LFKSEQARKSILILQKADVDVKPPKEVLLANLSSLTDPSVTAPILAEIENWFKRKR"
     gene            complement(17902..18399)
                     /gene="tpx"
                     /locus_tag="U0290_000902"
     CDS             complement(17902..18399)
                     /gene="tpx"
                     /locus_tag="U0290_000902"
                     /EC_number="1.11.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiol peroxidase"
                     /protein_id="HEM2300948.1"
                     /translation="MTQVTFKHNPVTLVGTERKVGDKAPNFTVVNRDLEEVTLHDYDG
                     KVRLISVVPSIDTSVCSTQTRKFNEEASNLDNTVVLTISVDLPFAQKKWCAAEGLPNA
                     ITLSDHRDLSFGEAYGVIMKELRLLARSVFVVNAAGEIVYTEVVPEGSDHPNYEAAIE
                     AAKKA"
     gene            complement(18460..18996)
                     /locus_tag="U0290_000903"
     CDS             complement(18460..18996)
                     /locus_tag="U0290_000903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RDD family protein"
                     /protein_id="HEM2300949.1"
                     /translation="MANENVAFESKRQVYHYEPPIQKEEAIPKQYFAGFWIRFLAYLV
                     DLVVIAALKGIIINPIFRVSGMGMDDSFFTFYWGMTTIIFLAYFILLTKFFGQTLGKM
                     LFGLRVVKLDGEKLTWLTVLFREGAMRFVLKTIWPLYVVCAFTPNKQGIADFFESTSV
                     VHTGYLELDEKWVNGAKK"
     gene            complement(19016..20029)
                     /gene="sppA"
                     /locus_tag="U0290_000904"
     CDS             complement(19016..20029)
                     /gene="sppA"
                     /locus_tag="U0290_000904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptide peptidase SppA"
                     /protein_id="HEM2300950.1"
                     /translation="MNAKRWIALGIVFALLLVSALAKFTSSQIASKEDSSPTFVESLF
                     ADTGELTETVIEEGGNDTIAVLSVDGTIQDTGDSGSLFSEAGYNHSFFMQQLEQVRND
                     DNIQGVLLYVNSPGGGVMESAQIRDKILQIQKERNIPFYVSMGSMAASGGYYISAPAD
                     KIFASKETLTGSLGVIMQGYDYSELMKKLGVSDNTIKSGEYKDIMSGTRPMTEDEKKI
                     MQSMIDDSYNEFVKVVAQGRGMTVEQVRKIADGRIYDGRQAKENGLIDEFGYQEDALE
                     ALKKEQGLAGATVIQYDAPGDFSSLFSVAAQKISGQNADISQLIKLTGTLKAPRMMYL
                     YGE"
     gene            20208..21011
                     /locus_tag="U0290_000905"
     CDS             20208..21011
                     /locus_tag="U0290_000905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HEM2300951.1"
                     /translation="MAKTIFYFSYRKTEELHAKAKELKKITTDYGYELTDDYQKANVI
                     ISIGGDGAFLKSVRETGFRQDCLYAGIALTEQLGQYCDFHINQLDEIIKAAIEDRWLV
                     RRYPTIYGTVNNTKAFYVLNEFNIRSSIIRTLTMDLYINDSHFETFRGDGMVISTPTG
                     STAYNKSVNGSIVDPLLPSMQVSELASINNNKFRTLGSSFILSPKRKLRIEIASEEGN
                     NEFPMIGMDSEALSIQHVHEVNLEVGDRFINIIKLPKNSFWDKVKRNFL"
     gene            complement(21043..21993)
                     /gene="argF"
                     /locus_tag="U0290_000906"
     CDS             complement(21043..21993)
                     /gene="argF"
                     /locus_tag="U0290_000906"
                     /EC_number="2.1.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ornithine carbamoyltransferase"
                     /protein_id="HEM2300952.1"
                     /translation="MTMYAKNNTAGKDMLSLLEWNKEELTDIIKLAVAMKTNPAHYSH
                     ILSGKILGMIFDKPSTRTRVSFEAGILQLGGQAIVMSSKELQIGRGEPIKDTAHVMSE
                     YIDAIMIRTFSHEKVEELAYHAEIPIINGLTDLHHPCQALADLMTIYEWKDQLEGVKL
                     AYIGDGNNVCHSLLLAGAMVGIDIRLAMPKGYEVDETILAKAENLAKQSGGKIFVTED
                     PKLAVTDADFIYTDVWTSMGQEDENAKRLADFGEKYQVNAELVSGAKPDYHFLHCLPA
                     HREEEVTAEIIDGNHSVIYQQAGNRLHAQKALLAAILEAK"
     gene            complement(21990..23150)
                     /locus_tag="U0290_000907"
     CDS             complement(21990..23150)
                     /locus_tag="U0290_000907"
                     /EC_number="2.6.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylornithine transaminase"
                     /protein_id="HEM2300953.1"
                     /translation="MKHVFPTYKRFPIDLVNGTGTVVTDKNGKTYLDFTSGIAVCNLG
                     HCPANVAEAVQQQLTNIWHTSNLYECALQDSVAELIADGKDRLVFFCNSGTEANEAAL
                     KLARKYTGKEKIITFEKSFHGRTFGSMSATAQAKIHQGFGGLVPGFTYVPYNDIEAFR
                     AEIDEHTAAVMLEVIQGEGGVIPANAAFLLEVQLLCKKMGVLLIIDEVQTGLGRTGTL
                     YGFEQIGLEPDIFTLAKGLGNGLPIGAMVGKANLSSAFGPGSHGSTFGGNKLALAAAK
                     EILRTMKQAGFLEEVNAKADYFRYLLEVHLEALDNVSVIRGGGFLIGIELENTAEPVV
                     TELRDKGLLILTAGANVLRILPPLTVSYAEIDQAIYLLKSVLENQLIGSEEG"
     gene            complement(23147..23899)
                     /gene="argB"
                     /locus_tag="U0290_000908"
     CDS             complement(23147..23899)
                     /gene="argB"
                     /locus_tag="U0290_000908"
                     /EC_number="2.7.2.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetylglutamate kinase"
                     /protein_id="HEM2300954.1"
                     /translation="MENTIVVKLGGVASDNLTEDFFQQIIQWQAANKKIVLVHGGGHY
                     ITKMMKSLAIPVETKNGLRVTNKATLEVTKMVLIGQVQPAITTAFQKRNISVIGLNAG
                     DTGLLEADFLNDANLGFVGKITKVKTDLIEQLLSENIITVIAPLGINSEYDWLNVNAD
                     TAACEVASALQAEALYLLTDVPGVKKGSEIIGEIATDEIEKLQNAGVIKGGMIPKLAS
                     AAFAAENGVGKVIITDSLNTSGTKIKNKVAIG"
     gene            complement(23912..25108)
                     /gene="argJ"
                     /locus_tag="U0290_000909"
     CDS             complement(23912..25108)
                     /gene="argJ"
                     /locus_tag="U0290_000909"
                     /EC_number="2.3.1.1"
                     /EC_number="2.3.1.35"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional glutamate
                     N-acetyltransferase/amino-acid acetyltransferase ArgJ"
                     /protein_id="HEM2300955.1"
                     /translation="MELVKGNIASPKGFYADGKHAGLKRKRNDIGWIYSEVPANAAAV
                     YTMNQMQAAPIFVTKDSFQSNAKLQAIIVNSGNANACTGNQGMLDALAMRAQTAEKLD
                     IPLDYVAVASTGIIGDMLPMDKINAGIEMLEKQTGNAADFEEAILTTDTFQKQISFQT
                     EIGGRKVTMSGVAKGSGMIHPNMATMLAFITTDAAIPAELLQKLLKIKVDKTFNQITV
                     DGDTSTNDMVVVMANGCAENSMLQEGTADFAKFADMFQAVTEHLAKSIARDGEGATKL
                     IEVQVNGATKTEDARMIAKKIVSSSLVKTAAFGGDGNWGRIICAIGYSGGRFAPDNIT
                     IKIGGIEILNHSSQTIFNQQALDAYLEEEHIIIDVDLHIGLESGTAWGCDLSYEYVKI
                     NACYRT"
     gene            complement(25124..26155)
                     /locus_tag="U0290_000910"
     CDS             complement(25124..26155)
                     /locus_tag="U0290_000910"
                     /EC_number="1.2.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyl-gamma-glutamyl-phosphate reductase"
                     /protein_id="HEM2300956.1"
                     /translation="MKVSIIGATGYGGLELIRLLHQHASVDIATLHSFSAQSETLATF
                     YPHLKDLEASPLEKINSAEIIEKSDTVFIATPSGIAKDIALPYVDAGLNVIDLSGDFR
                     LKDRQLYEKWYGKSAAPIEYIAKAEYGLAEFRDKKEARFIANPGCYATATLLGIAPLV
                     ISQLIDPTSIIVDAKSGISGAGKVPSASTHFTETNENMTLYKMNSHQHIPEIMQQLTK
                     WDETIPAIQFSTSLIPITRGIFTTIYVKPKNPITQKELHTLYKSTYENAPFVRIQPEN
                     VYPTVKQVTASNYCDIGLAYNEKTNVITIVSVIDNLVKGAAGQAIQNLNIMANFAESD
                     GLRFIPVYP"
BASE COUNT         7605 a         5616 c         4504 g         8434 t
ORIGIN      
        1 aaggaaaatg aattgccctt ttttcaatga aacctctata gaaagttttt cccatagagg
       61 ttttaattac atatcaaaat aataatattg cgtatgtttc ttttgatttc caagccattt
      121 tgttaatttt ggttttaata gtttgcggga aaatggaata aaaatgagta gtccaagtat
      181 agttgttata acacctggaa taattaataa aaacccggcg ataaaaaagc acagactatc
      241 caacaaatac ggggctacag tgcggccatc tcgtaaattt cggaaaaggt tgccaccaag
      301 ccgtttgaaa ataaaaacac caaaggcact tgaagctgcc tgaataaaaa gaagtggcca
      361 aaagccaatt acttggaata accaaacgta cataatcaat tctattaagc catataaagc
      421 ccaataaaga ataaattttc tcataaaatc aactccaata cttactctct attataacct
      481 attttggcgt aatcgaaaaa caatacaggc gtgcgcataa aaaaagcgtc ccgcatgcgg
      541 gacgctttta gaaagttaac tattaatgtg ttgctgtttt gccgttatat acaacacctt
      601 gacgagaatc aacagtaatg atttcaccgt cttttacaag agatgttgca tctttagcgc
      661 caacgatgac aggaatgcct aggttgattc ctacaactgc tgcgtggcta gtcaagccgc
      721 cttcttccac aacaactgct gcacttttct cgaatgcagg tagcatttct ttatccgttg
      781 ttttaacgat taagattccg ccttcttctg ctttttcaag tgcttctgca ttggatttag
      841 caacgattgc tttaccgata acagatttgc tgccaatacc ttggccttta acaacttttt
      901 caccaattaa ttggattttc attacgtttg ttgttccact ttcagtaact ggaacaccag
      961 cagtgatgat aattaagtcg ccttgttttg caacgccaga agcaagagat tctttcactg
     1021 caaggtcgaa catttcatct gtgttgctaa ctggagtagc taggcgagga taaacacccc
     1081 atgaaagtgc taaaccgcgg tatacatgct cgttgaatgt tacagcaacg atatgagatt
     1141 taggacggta tttagagatc atacgcgctg tgtgaccact ttgagtcgca gcaacaatag
     1201 tttgtacatt taggtttttc gcagtatggc caactgcttg accgatagct tctgtcatat
     1261 ccgtattttc gtgaagttta agtgcaaatt tatcttgagc aactagtact tcttctgtac
     1321 gaacagcgat tttcgccatc attttaactg cttctactgg ataatcccca gcagctgttt
     1381 caccggacaa cataattgca tctgttccat caaaaatcgc attcgctacg tcacttgctt
     1441 cagcgcgagt tggacgtggg ttacgttgca tggaatcaag catttgtgtt gcagtaataa
     1501 caggtttacc aagtttatta cattttctga taagttcttt ttgtacaatc ggaacttctt
     1561 cagctggaat ttcaacacca aggtccccac gagcaaccat taggccttga gatacttgta
     1621 agatttcgtc gatattatca acgccttctt ggttttcgat tttaggaatg atttgtacgt
     1681 gagttgcatt gtgctcttct agaattttag tgatttcaag aacatctgta gcacgacgta
     1741 cgaaagatgc agcgataaaa tcaatacctt gttctaaacc aaagcggata tcagcagcat
     1801 ctttttctgt gattcctggt aggttgatag aaacgtttgg tacgttaaca ccttttttat
     1861 ttttaagtac acctgggtta agtacttttg ttactagttc gcgattagct tcgtcttttt
     1921 cgattacttc aagaccgatt aagccgtcat caagtaaaat ggaagaacca atttctacat
     1981 catcgtaaag ttcgccgtaa gtcacggaga atttttcttt tgttccttca acaggagtca
     2041 tagaaacacg tacaacatca cctgtttgga attctaattt tccgccgacc atgtcgtttg
     2101 tacggatttc tggacctttt gtatcaagta agatagccac ttgtttacca gtttttttcg
     2161 atgcttcgcg gatatttaca atacgcgcac cgtgctcttc aaaatctccg tgagagaaat
     2221 taagacgtgc aacgttcatt cctgcttcga tcaactgaac taatgtgtca actgactcac
     2281 ttgcaggacc aattgtacaa acaattttcg tttttttcat gttattactc ctcctagaac
     2341 ttagctattc attcgtattt attataaaca tatcttccac attttaccag taacaacctt
     2401 gtaaaacaag taagtttgtg aataaaatcg caatcaacct gcatggtaac gataacaaga
     2461 aaacgttttc cagattgtta cagcatgctt aatgaacgat ttgcatttct ttaccctcaa
     2521 agtttatttt taatacgtta ctaaaatttt tcacaaagaa aggctaccat gctttgtcat
     2581 ggcagccagc tcttcagccg ttttaaatcg acaaaataga tgctagatca aataattttt
     2641 gatcaagtgt gtgtttttct ttcaaaattt cactaatgtc attttcgaca attctatttt
     2701 cacggattcc aacagctaat cctccgcggt tttctaacaa taattctact gaacgtgcac
     2761 caagacggct tgcaagtaca cggtcaaatg cagttgggct accaccacgt tgaacgtgtc
     2821 caagaacagt tacacgtgca tgataatcgc catattcagc taattgttta gcgaattcat
     2881 taccggacat tacgccctca gcaacgacga taatactatg ttttttacca cgttcgcgac
     2941 ctttgttcaa acgatccacg acatcatcca tattaaaact ttcttctgga acgatgatag
     3001 cttcagcacc accagcaagt ccagaccaaa gagcgatatc accagcgtca cgtcccataa
     3061 cttcaataat gaaagtacgt tcatgacttg tagctgtatc gcggatttta tcaagtgcat
     3121 caagaacagt gtttaacgct gtatcaaaac caatagtaaa atcagttcca gaaatatcat
     3181 tatcaatagt tcctgggata ccaatagttg ggaatccacg ttttgtaagt gcttccgctc
     3241 cgtgataaga accatctcca ccaataacca caaggccatc gatttgatgt tttttcaatt
     3301 gttcaattcc tttaagttgt ccttcttctg tagcgaattc aggatatctt gcggaataaa
     3361 ggaatgtacc tccgcggtga agtaaatcac caacagaacc taattctagt ttacgaatat
     3421 caccattgac tagccctaaa aagccatagt taataccgta aacttcaagt ccttcataga
     3481 ttgctttccg tacaacagca cgagtggctg cattcattcc tggagcgtct cctccacttg
     3541 ttaaaattgc aattcgtttc attttactta ccacctcaga caatgatatt gtttttcatc
     3601 acatgtgttt attctacatg aaaaaaggtc aaatgaaaag cttcaacaga gcactttttt
     3661 aaacgagaag ctttgtaaat cgccatttta aatatcggtc tattccgatt cgtacgaaaa
     3721 acggctttat agcttaaata aacataattg gtctatactt gtgaatgggt aaactttctt
     3781 tttagcgttt ggcatatacc aaagaagcgg atctcctaaa attaggaaag ccgcttcttt
     3841 tattgtttat aaagtatcgt atacaccgat tttcttgaat ttttcataac gctgttctat
     3901 taattgttct tcagaaaatg ccattagtgc atgtaaagac ttcgtgatag ttttgttaat
     3961 ttcttcggct tgtgcattta aatctcggtg cgcaccgcct tttacttctg gaataattcc
     4021 atctgtaatg ccaagttcaa ataaatcgcc agctgtaatc cgcatagact ctgctgcttt
     4081 cttcgcttga ctggcatctt tccataaaat agctgctgct ccttctggtg aaataacaga
     4141 gaaaactgca ttttcaagca tgaaaatttg atttccaaca ccaagagcga gtgctccacc
     4201 acttccacct tcaccgatta caatagaaat aattggtact ttcatatcgc tcatttcata
     4261 aagatttcta gcaatggctt cactttgacc gcgttcttcc gcagctcgac ctggataagc
     4321 acctttcgta tcgatgaagc aaataattgg tcggccaaat ttatctgctt gtttcatcaa
     4381 acgtagcgct ttacggaaac cttcaggatg aggcatacca aaattacgat gtaaattatc
     4441 ttttgtatct ttaccacgtt ggtgaccaat aactgtcact gggataccgt ggaaagttgc
     4501 gataccgcca acaattgcag catcgtcacc aaatgcgcga tccccgtgaa gttccatgaa
     4561 gtcttcgaac aaaagtgaaa tataatcaag tgtcgtaggt ctttctggat ggcgagctac
     4621 ttgaaattta tcccaagcag tcatattgct ataaatgctt gattctaact tagctaagcg
     4681 tttttctagc ttttcaattt cattggtcaa atccacatca gaagtttcat tgtactcttt
     4741 taagtcagca atcttacttt ttaattctaa aatcggtttc tcaaattcca tctcattcgc
     4801 catccgcttc acctcctact tcaggtgttt tcacgtgaat gcttaaaata aaacttaatt
     4861 tattttgcag atcaaggcgt gaaatacagt catctagttg tccatgcttt aataaaaact
     4921 ccgacgtttg gaagtcttct ggtaattctt cacgaacggt ttgttctatt acccggcgtc
     4981 cagcaaagcc aataagtgcg cctggttctg caaagttata gtctccaagg gatgcaaaac
     5041 tagcagaaac cccaccagta gttgggtgcg tcattaccgt aataatcagt cccccgtgat
     5101 tgctaaatcg tttaaatgca gcagaggttt tcgccatttg cataagcgaa agcatcccct
     5161 cttgcatacg cgcgccacct gaagcagtga aaataacaaa cggtttattt gttttatcgg
     5221 catcttccac ggcacgaaag attttttcac cgacaacaga gcccatactt gccattctaa
     5281 aacgagaatc catcactgca ataacaagcg gattaccatc aattgtagca tgaccagtaa
     5341 caatggcttc atttaaacca gatttttgct tatctttctc aatacgatcc atataatctt
     5401 caaaaccaag tggatttgct gtcgttaaac tagcatcaat ttcttcaaaa gagccttcat
     5461 caactagcat atcgattcgt gcttttgccc caattggatg atgaaaacca caataattac
     5521 ataccataag atttttttgc aattctttgg tatacattat ttttttacat tccggacatt
     5581 ttgtcataat accttctgga acatctgctt tcgttccatc agaaggaatt gtggcatatt
     5641 ttctcttttt tggttttgta aacaagtctc ctagcaagga taaccctccc catttacgct
     5701 ttctattgtg gttattaacg atttttaatg ttgtaaaaat aaaaaatgaa taaagacatg
     5761 aaacataaat caaccgcatt ttcccacaag aagacaaaat gccagtctat ccgaattaca
     5821 actggacaga ctgcgcaata ttgttttcca cgttaaacta taacatactt tctataaata
     5881 tagaaagtct aagattactt aatgactaca ttctctttac cgagtagctc ttctaacgct
     5941 tcttgcagct catttgatgg cgttacttga atatttttca gctcagcagt ttgtttcgtt
     6001 attgcttgat gcacaatgac cttactgtcg cctttataac gcgttaaaac tggcttaatt
     6061 tgttccattt gctgtggttc cgttaatttt aggaacaatc gtacgggggc ttttatttct
     6121 tttaaatctt ctgctttatt gataattaac tgtagctctc cgttccttgt gtctgctttg
     6181 acttgcaaaa agagaatctc ccctttttgt gcaaagctcg cgaatttacg ataactttcc
     6241 gggaacatga cggcgctcag ttcttttgaa tcatcactaa ttgttaaaaa gcacatcgtt
     6301 tcgccctttt ttgttctaat tgatttgact tcatgtacat aagcagctac ttgatagttt
     6361 ttgccggaag aaagatttgc aagtcttgta atagcaagat tttgtaattt attttggtag
     6421 tacgatactg gatgcgctga aacgtattga cccgtgtata atttttcttt ctccagcttt
     6481 tcgtcaatcg aaatgggcgc ggttttccgg tagcgtggtt tcatcttttt caaaaagtca
     6541 tcatcttccg cgaaaagatt cattcctttc gaatcttcac cgagtagcga aatatattgt
     6601 agcactgcat caatggttgc caaaatcgtt gctcgatcct cgccaaattc gtcaaaacac
     6661 ccagaaaata caagtgcttc taaaacggtt tctgagagca ttttatgtgg cattctttca
     6721 caaaaatcaa agaaatctcg gaaaggtgct ttttttcgtt cgttaataat ttctaaaatg
     6781 aatttcgttg gcactttacg aataacacgg aaactatagc ggatagatga ttcattctcc
     6841 acttggaagt agtaattact atggttgatg cttggcgcta acatgctaat tccgtagttt
     6901 tttgcttcgg taatgtactg ggaaattttg tcgtcattgc caaaaacaga gctaagaagc
     6961 gacgacataa atgcagctgg aaaatgtgct tttaaataag ctaattgaaa agcgattttt
     7021 gaatatgctg cagcgtgact tcggttgaaa ccgtaattcg cgaattgaac aatcatatca
     7081 tacacttggt tagcgctagc atctgaataa cctctactct tagcaccttc cacaaagtga
     7141 attcgctctt cgtttaggac atctgctttt ttcttgctga ccgctcgtct taataaatct
     7201 gcttctccaa gcgaaaatcc agccatttgg ttcgctactt gaataatttg ctcttgataa
     7261 acgataacgc cgtatgtcac ttccaaaata ggcgctaaat ctggatgagg atattgaatt
     7321 ttttcttttc cgtgttttct agcgataaat gtatcaattt gttccattgg acccggacga
     7381 taaagcgcat ctaccgccac gacatcttca aaagaagttg gttttaattt tcggagcacg
     7441 cgtcgaatcc cgtccgattc aaattggaat acccctgtcg tgtcacctgt ttggaatagt
     7501 ttcaatgttt ttttatcttc taaggaaata tctgctaatg ttaacggagt ttctctagta
     7561 taattgactg atttcaaaac acgatcaagt aaactaagat ttctaagtcc taaaaagtcc
     7621 attttaagta agccgatttt ctctaattct cccatagcaa actgggtcaa acgtgcatct
     7681 ccgctaccta attgtagcgc gacttgttct acgagtggct tgtcactaat aactattccg
     7741 gctgcgtgcg ttgaaatatg acgtggcaag ccttccagtt gacaagcaac ttcccaaatc
     7801 atttcatttt ctttagagct tttaatatgg ttttctaaac gcggactttc ttgtagtgct
     7861 ttttgtaacg taatacctaa ctgacttgga atcaacttag accattcaga taatagtaca
     7921 gaatttagcc caaaactcct cgcagtatcg cgaatcgccg cttttgccgc tagtgttcca
     7981 aacgtgccga tttgcgccac atgcgcttct ccgtatttag ataccacata cgaaatcact
     8041 tcatcacggc gattatctgg aaaatccaaa tcaatatcgg gcatcgtgat acgttctggg
     8101 tttaaaaatc gttcaaatag caaattgtaa cgaattgggt ctacatccgt aattctgagt
     8161 gcataggaaa caagcgaccc cgccgcagag ccccgacctg gacctgttaa aattcccgcc
     8221 tcgcgtgaat aacgaataac atcccaaacg attaaaaagt aatctgcaaa acccatttcc
     8281 gtaatgactt ttaattcata ttctaaacgc tcctgatatt ccacacctaa taaatttcgt
     8341 tcttttaatc ctgcaaaggc tgtttgacgc aaaacatctg atgcattttg tccttcattt
     8401 aatggaaatc taggtaataa atgctgatcc aaagcaattt cgacatgaca acgatctgca
     8461 agttcaccag tttctaagca tgcccgtttt tcgaactccg tttgccaatc acgttccatg
     8521 tcttcttgtg aggtaaaata atttggtcca gcaagtggta acgttgtcca atcgaccgtt
     8581 cgattatcac gaatggccgt taaaacttct tttgcttgcg catcttttgg ttctatatat
     8641 tgtacatttt tcgtcgcaac aaccggtaca ttttcttctg cagaaaaagt ttctattttt
     8701 gtgaaaagac gtggattttc tttttgggca gataaataaa cagattcttt accaaaaatt
     8761 tcgactaaat ttgcataaac ttccagtgct ccctcgcgat tctcctccat cagaagacgt
     8821 tcgatttctc ctttggcacc aggtgaaatc gcaatcaagt tactgctata agcgcgtaac
     8881 cagctttgtg gcaattcggg gccttcttcg cgcgtttgaa tagcactcgc gatttttaat
     8941 aactcgtgat atccagcggt tgattccgca attaatatca actcatatga attaattgga
     9001 tttaagtaac cttgaattgt caccgtcatc ccgataattg gttttatatc cgccgctaaa
     9061 cacttttgat aaaactcgac tactccgtaa agtacatttt tatccgtaat tgctaaggct
     9121 ggataatggt attcttttgc tttagcgatt agcttatcaa tcgatgctgt acttgaaagc
     9181 aaatcataag cgctcgcaac ttgtaaatga acaaacccca ctatcctctc tcctttcaaa
     9241 actctctttt tccattatat cggttaagct aaaaaaaaga aagtgtgttc gtgtttttat
     9301 ataaaaataa agccagataa ttaatccgac tttatttcct aattatttat cggcacaaat
     9361 gcgttgcaat tttgccgtca tttcctttat ttcttcttca ttatgaagtg tcgcaccaga
     9421 agcaagcgga tgtccgccgc cgccatactc tttggctaat tcattaataa ctggaccttt
     9481 agaacgtaaa cgagctctaa aaacgggacc ttcttgaatg aacataatcc atgccttgat
     9541 accttccaca ttttcgatac acgaaacaag tgcggaagcg tcgcgcggat caacttcaaa
     9601 ctcgtttaaa agcgtatcac ttaaataaac ggttgcagcg ccattttcat ccatgacaaa
     9661 gttttgcaaa atatatccag aaagttttac cgtatttttc ggtaattcat ataattctcg
     9721 gtaaagcgcc ggacgatcaa atggaaatgt cactaaatgc gcagataaac gtaaagtctc
     9781 ttccgttgtg cttggataca agaagcgccc agtatcacca acaattcccg cataaaggag
     9841 tcttgcagca gtttcattca aaattaactc atccgaaaac atttcccaaa aagcgacaat
     9901 catttcacta caagaagaag ccgtcgtgtc cacccaaagt aaatcaccat acgcatcatc
     9961 atttggatgg tggtcaattt ttataagtgc tttaccaagg ttaaaacgcc cgtctgaaat
    10021 ccgttcttgg ttcgcggtgt cacacacaat cacaagcgca tctttataaa tttcatccgt
    10081 tatttcgtcc actataccaa gaaattggag cgacttttca tcatttccaa ctgaatagac
    10141 ttttttctca ggaaagctag cccggataat ttccgcaagc cccatttgcg atccgtatgc
    10201 atctgggtca ggccgtacat gtctatgcaa aataatcgtt tcatattgtt ttatttgttg
    10261 taaaatctca cttttcattg tttcgcctct atttcttttt aacgttccat catttgacaa
    10321 gcgacaatag cttttccggt caaaattcct tctaagtaaa gctctacatc aagcttaccg
    10381 gccttacgcc ccatctccaa aattcgcggt ttaataataa ttgtcgcgtc catttgaaca
    10441 ggttttagga aatacatcgt tacattttca atcgctacat tccgtttttt catagaaaat
    10501 agtttttgct gtacgacgtc acaaaccact tgtgtaaata caccatacga taatgttccg
    10561 agtgaattag tcatttgcgg gctaacttta aattcataat ctgcctcttc tccagtatct
    10621 gctttttcag aaagctgatt cgcaatcgta tcatcaattg tttcaccgac ttgcggttgt
    10681 ttttgaatca tttgcataga ttttagaata tcctgtctgc taacaatccc gattaatgtt
    10741 aagtcatctt taacgactgg aattacttcg atactctccc aaatcatcat gtgcgccacc
    10801 gaggctacac tcatttttgg tcccacagtt aacggatttt tcgtcattac tcgttcaatt
    10861 gaaatacttg gatttttttc tagaatatcc ttacttgtaa ccatcccagt cagtcgcatc
    10921 gctcggttaa ctacaggaaa tcgactatga cctgtcgctt cttccatttt atgccaatct
    10981 tccactttat cagacgtaga taaaaatgca gttgtttcta atggggtcaa aatatcctcc
    11041 acaaatacta cttctttttt aattaattgg tcataaatcg cgcggttaat catcgttgca
    11101 actgtaaacg tatcatacga agtcgataaa atgggcagtt ctttctcgtc cgccaaccgt
    11161 ttcacttcgt cgtccgtatc aaacccacca gtaatcagta ccgcggcgcc acgtttcaaa
    11221 gcaagttcat gagcgctcac tctatttccg acaattaata agtttcctgc atcggtatag
    11281 cgttccatcg cttccactgt catcgcccca ataacaaact tattaagcga tttataaagc
    11341 cccgcacgac cgcctagcac ttgcccatcg atcatattca caatctcagc aaaagttaat
    11401 ttttcgatac tatctttttg cttccgttca attcgaagtg ttcccactcg tttaatagta
    11461 gaaacaaacc caatgatttc tgcatcttta atagcccgat aagcagttcc ctcgcttaca
    11521 gacaagtttt tcgcgatttt tcgtacagat attttttctc caactgcaag attttcaatg
    11581 tattttaaaa tctgttcatg ttttgtggcc acgacacgtt cacccattcc tattttgtta
    11641 gatttcgata ccttccccaa tttcaagtac ttttccagtt atcccctcat caagcgatgc
    11701 aacaaatttg tgcggatctt gcgcaatcaa aggaaacgta ttgtaatgca ttggaacaac
    11761 taatttcgct tgtaaaaacc gtgccgcaat cgccgcatct tctggtccca tggtaaaatt
    11821 atccccaatc ggcaagaaag caacgtctag cggatttaat tcaccaatta atttcatatc
    11881 agaaaacaaa ccagtgtccc ctgcaaaata aatattttta tcttctatcg taaatacaat
    11941 cccagttggg aaaccaaggt taacaatgcg accatctcga accgtctgcg atccgtgaaa
    12001 agcttgcgtc aacttcactt ggccaaaact aaactgtctt ttcccgccaa tatgcattgg
    12061 agcgatattt tcaagcccat cctctactgc taaaaaagaa gccaaatccg cattacagat
    12121 aacggttgct ccagaattct tagcaatttc aactgtatca ccgacatgat catcatgtcc
    12181 atgcgacaga acgataaagt caggcatctg ctcttccgct tttaaatcac atttctcatt
    12241 accagaaata aatggatcca cgagaatagt tgtatcccca gtaattattt taatacaaga
    12301 ctgaccatga aatgaaatct tcatgttaaa aaacttcctt cctgattcat tattctatgt
    12361 gtattattgt accactattt attataaact actatataac acctcgtaaa ctaagaggtg
    12421 tttattagca aaataattcc ttcgcatgtt atcatgaaat agaaatcaat tggaaagaag
    12481 gtacaattat ggaaaaaaat atcgatgtct tacaaaattg gctaaaagac caaggtgctg
    12541 aggtggcatt tttaacagat ccagagaaca tcgcttattt ctcgggttat catagtgagc
    12601 ctcatgagcg cgtgcttggc ttagcagttt tcccagatag tgaaccgttt ttatttacgc
    12661 ccgctcttga agtagaagat gtgcgcggcg gtgactggac acaccctgca tacggatata
    12721 acgataccga gaatcctttc accatcattg cagacgaaat caaaaaacgc gttgcaaatc
    12781 caagcaaatt tgctattgag aaaaaacata tgagcgtaga tcgctacgaa caattaggtg
    12841 gattattctc cggcagctct ttcattccga ttgaacacaa aattgagcaa attcgtctga
    12901 ttaaaaccga agccgaacta aaaatattaa aagaagcagc cttattagcc gattacgccg
    12961 tacaagttgg tgtaaacgaa atcgcagaag gtaaaacaga agcagaaatc gtggcgaaaa
    13021 tcgaatacga aatgaagaaa aaaggcgtaa ctgccatgtc tttcgataca atggtcctta
    13081 ctggtaaaaa cggtgccctg ccacatggta ctccaggcga aacaaaaatc aaaaaaggcg
    13141 atttagtttt atttgattta ggcgttgtcc ataaaggcta ttgctctgat attacacgca
    13201 cagtagcttt tggagatatt tccgatgaac agaaaaagat ttacgacact gttttagaag
    13261 cgcaaattgc cgctgtcgaa aaagtaaaag acggggtaaa agcaagcgaa attgatttaa
    13321 ctgctagaaa tattattcgt gaagcaggtt acggtgatta tttcccacat cgtcttggtc
    13381 acggtcttgg cgcgagtgtc catgaattcc cttcgattac agaaacgaac aatatggaac
    13441 tgcaagaaaa tatggtattt acgattgaac caggtattta tgttcccggt gttgccggcg
    13501 ttcgtataga agatgacctc gttgtcacaa aagacggcgt gcaagtatta acggaattcc
    13561 caaaaacttt acaagtaatc gactaacaag aaaagcgaac tttcctttga gaaagttcgc
    13621 tttttttatt aaattaattc tttgctatcc gtatagggta aatcaagtga atctgcaaca
    13681 gccttgtacg taatgtgacc ttggtatgtg tttaatccac gaagtaagaa tgggtcattt
    13741 tgcacggctg cttttaagcc ttgattagca agtttcaatc caaatggtaa agtggcatta
    13801 gtaagcgcca aagtggacgt ccgcggtact gcacctggca tatttgcaac agcataatga
    13861 agtacaccat atttttcgta ggttggatta tcgtgtgtgg aaacgtgatc tgttgtttca
    13921 aaaatccctc cttggtcaat cgcgatatct acaaggacag atcccggaat catttgttta
    13981 attacatgct ctttgacgag tttgggcgct tttgctcctg gaattaatac tgctccaata
    14041 accaaatcag cttttttcac agctgtttca atattaaaat cattcgacat taacgtttgg
    14101 acttgattgc caaaaatatc gtccagttcg cgcaatcgtt tcaaattcat atcaagaatg
    14161 gtcacgttgg cacctaaacc agctgcaatt ttcgctgcat ttgttccagc gattccgcca
    14221 ccaataataa ccacttcact tttctctaca cccggcaccc caccaagcaa gacacccata
    14281 ccaccattcg ttctttgtaa aaattgtgcg ccaatctgag ctgccattcg cccagcaact
    14341 tcactcattg gcgaaagtag tggcaacgtg tggtctgcaa gttctactgt ttcatacgct
    14401 acactattta ctttactctc catcaaagct ttcgcaagcg ttggttcatt tgccaaatgt
    14461 aaatatgtga aaagtaatag tccttcttta aagtatgtat actctgatgc aatcggttct
    14521 tttactttta caaccatatc tacatcccaa gcttctttag ctgtttcaac aatttttgcc
    14581 cccgcttgca caaaatcagc gtcttgataa ttagagccaa tgcccgcatc tttttccacg
    14641 tatacagtat gacctgcatt tacgtatgaa aaaacacttg ccggagtcat tgccacccta
    14701 ttctcgttat ttttaatttc ttttggtacg ccgactaaca tctaaatcac tctccttgat
    14761 ataggtataa tagactataa aagattttct acacccccat gctaacacaa tatacctaag
    14821 ttgtaaaaaa ttaactaact gaaattcaaa caaaagtttt agtaaaatta gacgaaatat
    14881 ttgtttcact ataatttatt tttcatttta tggttctttt aggaaaaaga gggtaaaata
    14941 taagtataga aaatacatat tttgattgga ggaattatta tgttacaaca atacgaaaga
    15001 gttttagtag cagttgatgg atccaaagaa gcagaaagag cattccaaaa agcaattcaa
    15061 gtggctaacc gtaatgacgc ggcgcttggt ctggtacatg ttatcgatac acgcgcgttt
    15121 tcatctgtag ccaattacga tacaagcatg gcagacaaag ctaccgaata tgcagatgaa
    15181 ttacttagtg gctataaaga agatgcttta aaagccggtg taacaaaagt agaaagctac
    15241 attgagtatg gttctccaaa aacagctatt acaaaagaag cagcaaaagc attccaagca
    15301 gatttaatca tgtgtggtgc aactggactt aacgctgtag aacgtttgtt aattggtagt
    15361 gtatctgagt atattattcg ccactcccct tgtgatgttc ttgtagtacg taatgatgtt
    15421 cctgattata aagaagaaaa ataaggatag aaaaaaaggc tagctcttaa ttaagagcta
    15481 gcctttttta cttttttagt gattgttttt aattgtttct acatcacgag caatcattaa
    15541 ttcttcgttt gtaggaatga tgataacttt tactggggag tgcggatagt taaggaatct
    15601 ttcttctccg cgcacttggt taagtgctgg atcccagtat acgcccatga attcaagtcc
    15661 acgaagtact ttttcacgga tgtatgaact attttcaccg ataccagctg tgaagataat
    15721 ggcatctaca ccgttcatgc gagctgcata agaaccaatg tatttatgga tacggtcaac
    15781 gaaaacttga agtgcaagtt ctgcgcggtc gtttcctttt gctgcttcat cttctaaatc
    15841 acgaagatcg cttgaaatac cagatacgcc aagcatacca gattctttgt ttaacacatc
    15901 aagtacttgt tctgcagttt tgccagtttt ttccatgatg aaaggaataa gcgcagggtc
    15961 aatgttacca gaacgagttc ccatagaaac accagctagt ggtgtgaatc ccatggaagt
    16021 atccattgat tttccgcctt cgattgcagc gatactagca ccattaccaa ggtgacaagt
    16081 tagtaaacgt aattcttcta caggacgtcc taaaagttct gcagcgcgtt cggatacata
    16141 tttgtgactt gtaccgtgga aaccgtattt acggatacca tagtcttcat agtagctgta
    16201 tggcagactg tatagataac ttgctggagg cattgtttga tggaaagctg tatcgaaaac
    16261 agccactgaa acaacatctg gtaaaatctt gcggaatgct ttaataccag taacgttcgc
    16321 tgggttatga agcggcgcaa gttcagatag agcttcaata tctttaatta cttggtcatc
    16381 aatataaacg gattcaggga atctttctcc accgtgaaca acgcggtgac caattccagt
    16441 gatttcatcg taagaaccga taactttgtg gttaattaat ttttcaagta gcatttgaac
    16501 agcaatttca tggtcaggaa tatcaataat ttctttgatt ttttctccgt ctacagtaat
    16561 tgtaaaaata gaatctttca aaccaattct ttctacaatc cctgctgtga taacacgttc
    16621 agatggcata tcatataatt ggaatttcag tgaagaactt ccggcgttaa ttgcaatcgt
    16681 tttttccatt ttgtttttgt caattccttc cattatcgtt tccttttgaa ccagttctct
    16741 atttcagcta aaatcggtgc agttacgctc ggatctgtta gcgaagagag attggccaat
    16801 aaaacttctt ttggcggctt tacatctacg tccgcttttt gtaaaatcaa gatgcttttt
    16861 cgtgcttgtt cagacttaaa cagtgtttca ggcaatttaa taattccctc aatatgaccg
    16921 tttttcttga taaacttgtc caccttagca aagtcactag tcccaaacat tgcgtcaggt
    16981 accaagaaga ataaatatcc tcctggcttt gtgtagcgca ttccttgttc tataaacaag
    17041 aaatgtgcaa atgaatgccc ttcttcacgg caaagttcaa atgtttttgc attttcgtca
    17101 tccggataat acccaacagg taaatcacta attacgacat ctacgggatc aactaataaa
    17161 ttagccagcc catcttgatg cagcaatgtc attttttgtc gctgtaaatc cgctcctact
    17221 agtgcaagcg aaataagcaa atcatctaca tctacaccac ttgcatgaac gtctacatca
    17281 ccttttaatt ctagctgatt aatcactgtt gttaaaaggt ttgcagtgcc acaggctgga
    17341 tccaagatag aaacattttt cttcttttga atcacttttt caagcaaata tgccacaatg
    17401 aaaccaatgg aatctggcgt catttggtgg ttcacttgaa taccgtgttt catgcctttt
    17461 agtagtgcta attgaagacc tttgcggatt tcttcattcg agaaattctc aagttcgata
    17521 ctttcgtaag acgcttgtaa tttcaattgt ttttcagaag acaactcttc tttttgtaaa
    17581 acttcttttt gaaacagatt ttctcctgtt tcataaaccg cttccaaata gcttatttca
    17641 agttcatttt gcaagataat agctgtatta tcaagcactt gaaataattc ttgcgttgct
    17701 tcatttgcca aaagtaacac ctcgaatttt catcattact aacaccacca aacattatac
    17761 agtatttcta aagaatgtga aaggatttta tgtagtaaaa gatgaaattc tcattggaaa
    17821 tagttcatta tcattagtac agtttatttt tagtagtaat acagaaaaaa gccctcctaa
    17881 ctaaaggaag gcttttacga tttaagcttt tttggctgct tctatcgctg cttcataatt
    17941 cggatgatcg ctaccttctg gaactacttc cgtgtagacg atttcccctg ctgcatttac
    18001 cacaaaaaca gaacgagcta gtaagcgaag ttctttcatg attacaccgt atgcttcacc
    18061 aaaagaaaga tcgcggtgat cagataatgt aatcgcattt ggtaaacctt ctgcggcaca
    18121 ccatttcttt tgagcaaatg gtaaatcaac ggagatagtt aagacaactg tattatctaa
    18181 attgcttgct tcttcattaa atttacgcgt ttgtgtggaa caaacacttg tatcaatgga
    18241 aggaacaacg ctgataagtc tcactttccc gtcataatcg tgcaatgtta cttcttctaa
    18301 atctctattc accactgtga agttcggcgc tttgtcgcca acttttcttt cggtacctac
    18361 gagtgtaact ggattatgtt taaatgttac ttgagtcatt ttttcttcct cctttaatgg
    18421 acgcttctat tccattttaa agaagaagtt tgctataagc tatttttttg ctccatttac
    18481 ccatttttca tctagttcta agtagcccgt gtggacgaca gatgtggatt caaaaaagtc
    18541 cgcaatgcct tgtttgtttg gtgtaaaggc acaaaccaca tataacggcc aaattgtttt
    18601 taagacaaaa cgcatcgcac cttctcgaaa taaaacggtt aaccaagtta atttttcgcc
    18661 atcaagtttc actacgcgaa gaccaaataa catttttcca agcgtttgtc cgaaaaactt
    18721 agtaagcaga ataaagtaag ctaaaaagat aatcgttgtc attccccaat aaaatgtgaa
    18781 gaaactgtca tccatcccca ttccagaaac gcggaaaatc ggattaataa tgattccctt
    18841 caaggctgcg atgacaacta aatcgactaa ataagctaaa aaccggatcc aaaagccagc
    18901 aaagtactgt ttaggaatgg cttcttcttt ctgaattggt ggttcataat gatagacttg
    18961 gcgtttactt tcaaaagcaa cattttcatt agccatttgc gcctctcctc tcacattatt
    19021 ctccatataa atacatcatt cttggcgctt taagtgtacc agttaattta attagttgag
    19081 aaatatccgc attttgaccg gaaatttttt gtgcagctac agagaatagt gagctaaaat
    19141 ctcccggtgc atcatattgg ataactgttg caccagctaa gccttgttct tttttcaaag
    19201 cttctagggc atcttcttga taaccaaatt catcaatcaa tccgttctct tttgcttggc
    19261 ggccgtcgta tatgcgacca tctgcaattt tacgcacttg ttctacagtc attccacggc
    19321 cctgtgcaac tactttaacg aactcattat aagaatcatc aatcattgac tgcataatct
    19381 tcttctcgtc ttccgtcatt ggtcttgtcc cgctcataat gtctttatat tcgccacttt
    19441 taatggtatt atctgaaaca cctaattttt tcatgagttc actatagtca tacccttgca
    19501 taatgacgcc aagcgagccg gtcaatgttt ctttacttgc aaaaattttg tcggctggcg
    19561 cggaaatata atatccacct gatgctgcca tactccccat ggaaacatag aatggaatat
    19621 tgcgttcttt ttgaatttgt aaaattttat cacgaatttg cgcggattcc atgacaccgc
    19681 cacctggtga attaacatac aaaagtacac cttgaatatt gtcatcattt ctaacttgct
    19741 ctaattgttg cataaaaaaa gaatgattgt agccagcctc actaaataag gaacctgaat
    19801 ctcccgtatc ttgaatagtg ccatctacag ataatacagc aattgtatca ttcccgcctt
    19861 cttcaattac tgtttcggtt agttcgccgg tatctgcgaa taggctttcg acaaatgtcg
    19921 gactactatc ttcctttgaa gcgatttgac ttgatgtaaa ctttgctaac gcactaacta
    19981 acaaaagtgc aaaaacaatc cctagtgcaa tccatctttt agcgttcatt tatttctccc
    20041 ctttttctga ttagataatg taataataac agcctctttt attttgtaca atctttctct
    20101 taaattgtgt cccatttcac ttttttactt atgatgaaag aaattgctct gaagtcatgt
    20161 tataataagt ttgttgatta aaattggatt ctggagggac aactaacatg gcaaaaacta
    20221 ttttttattt ttcctatcga aaaacagaag aactacatgc aaaagcaaaa gaattgaaga
    20281 aaattacgac ggattatgga tatgaattaa cggatgacta tcaaaaagca aacgttatta
    20341 tcagcattgg tggtgatggt gcttttctta aatctgtaag agaaactggc ttccgtcaag
    20401 attgtttata tgcagggatt gcgctaacag agcaattagg tcaatactgt gacttccata
    20461 ttaatcaatt ggatgaaatc atcaaagcag ccattgaaga tcgttggtta gtacgtcgtt
    20521 acccaactat ttatggaaca gtgaataata ccaaagcatt ttatgtacta aatgagttta
    20581 acattcgttc ttctatcatt agaacgctta cgatggatct ttatattaat gattctcact
    20641 tcgaaacttt ccgcggagat ggcatggtta tttccacacc aacaggaagt accgcttata
    20701 ataaatcagt gaacggttct atcgtggacc cacttcttcc atctatgcaa gtaagtgaac
    20761 tggcttctat taacaataac aaattccgca cacttggttc ttcgttcatt cttagtccaa
    20821 aacgcaaact acgtattgaa attgcgtctg aagaaggaaa taacgaattc ccgatgattg
    20881 gaatggatag cgaagcactt agtatccaac acgtgcatga agttaattta gaagtaggcg
    20941 atcgttttat caatattatc aaactgccta aaaattcttt ctgggataaa gtgaaacgta
    21001 atttcttata ataaaaaagt ctggcactta cgccagactt ttttattttg cttccaagat
    21061 ggctgctagt aatgcttttt gtgcatgaag ccgatttccc gcttgttgat aaatgaccga
    21121 gtgattgcca tcaatgattt cagctgtcac ttcttcttcc cgatgtgctg gtaagcaatg
    21181 taagaagtgg taatcaggct tggcaccact aactaattct gcatttactt gatatttttc
    21241 gccaaaatcc gccaaacgtt tcgcattttc atcttcttgc cccatacttg tccaaacatc
    21301 cgtataaata aagtccgcat cagtcactgc aagttttgga tcttctgtaa cgaaaatctt
    21361 gccaccactt tgcttcgcca gattttctgc ctttgcaaga attgtttcgt cgacctcata
    21421 cccttttggc atcgcaaggc gaatatctat cccgaccata gcgccggcta aaagcaatga
    21481 atgacataca ttgttaccat caccaatata agctagtttg acaccttcca actgatcttt
    21541 ccattcataa atagtcatta aatccgctaa cgcctgacat ggatgatgca ggtcggttaa
    21601 gccattaata attggaattt ctgcatgata cgccaattct tctacttttt catgactaaa
    21661 tgtccgaatc ataattgcat caatatattc tgacatcaca tgcgccgtat ctttaatcgg
    21721 ttcaccacgc ccgatttgca attcctttga actcatcact atcgcttgtc cacctaattg
    21781 cagaatcccg gcttcaaaag aaacccgtgt tctagtagaa ggcttgtcaa agatcattcc
    21841 taaaattttc ccgcttaaaa tatgactata atgagctgga ttcgttttca ttgcaacagc
    21901 taatttaatg atatctgtca attcttcttt attccattca agcaaactga gcatatcttt
    21961 cccagctgta ttatttttcg catacattgt catccctctt cactcccaat caattggttt
    22021 tccaaaacac ttttcaataa atatatggct tgatcgattt ctgcataact gacggttaaa
    22081 ggtggtaaga ttcgtagcac attagccccc gcagttagta ttagcaatcc tttatctcta
    22141 agttccgtta caactggttc tgcggtattt tcaagttcta tacctatcag aaatcctcca
    22201 ccacgaatga cagaaacatt atccaacgcc tctaaatgca cttctaacaa atatctaaaa
    22261 tagtctgctt tggcatttac ctcttctaaa aatcccgctt gtttcattgt tcgtaatatc
    22321 tctttagccg ccgcaagggc caatttattt cctccaaaag tagagccatg acttcctggc
    22381 ccaaaagcac tacttagatt cgcttttccg accatcgctc caatcggcaa gccatttcca
    22441 agcccttttg ctaaagtgaa aatatctggt tctaaaccaa tctgctcaaa tccataaagc
    22501 gtccccgttc gcccaagccc agtctgcact tcatcaataa ttaataatac ccccattttt
    22561 ttgcaaagca attgaacctc taaaagaaag gctgcatttg ctgggatgac gccaccttcc
    22621 ccttgaatta cttctaacat gactgctgct gtatgttcat cgatttctgc tcggaaagcc
    22681 tcgatgtcat tataagggac gtaagtgaag ccaggaacaa gtcccccgaa cccttgatga
    22741 attttagctt gggctgtagc tgacatcgaa ccaaaagtac gtccgtggaa agatttttca
    22801 aaggtaatta ttttttcttt cccggtatat tttctagcta atttgagcgc tgcttcattt
    22861 gcctctgttc cgctattaca aaagaaaact aatctgtctt taccatctgc aattaattct
    22921 gcgacactat cttgcaaagc acattcatat aaattcgatg tgtgccaaat attcgttagt
    22981 tgttgttgta ctgcttctgc aacatttgct ggacaatgac caaggttaca aactgcgata
    23041 ccgctagtga aatcgagata tgttttacca tttttatctg ttacaaccgt gcccgtaccg
    23101 ttaactaaat caataggaaa ccttttgtat gttggaaaaa catgtttcat ccaatcgcca
    23161 ccttgttttt tatttttgtt ccgctagtgt taagggaatc tgtaataata acttttccga
    23221 caccgttttc ggcagcaaag gcagcgctag ctaatttagg aatcattcca ccttttatta
    23281 cgccggcatt ttgcagcttt tctatttcat ctgtggctat ttcgccaata atttctgaac
    23341 cttttttcac accaggtaca tctgttagta aatagagtgc ttctgcttga agtgcgcttg
    23401 ctacttcaca ggcggctgta tctgcattga catttagcca atcgtattca ctgtttatac
    23461 caagcggcgc aatcacagtg ataatatttt cgctaagtaa ttgttcgatt aaatctgtct
    23521 ttactttcgt tatttttccg acaaatccca aattcgcgtc gttcaaaaaa tctgcttcta
    23581 gtaaccctgt atcacccgca tttaaaccga taaccgaaat attacgtttt tgaaaagcag
    23641 tggtaatagc tggttggact tggccaatta aaaccatttt tgtcacttca agagtcgctt
    23701 tattagtgac acgtagacca ttttttgttt cgacaggaat agcaagagat ttcatcattt
    23761 ttgtaatata atgcccgccg ccatgaacaa gtacaatttt tttattggca gcttgccatt
    23821 gtattatttg ttggaaaaaa tcttctgtta aattgtcact tgcgacaccg cctagtttta
    23881 cgactatcgt attctccatc ctgattcctc cttacgtccg gtagcatgcg ttaattttga
    23941 cgtattcata actcaagtcg caaccccatg ctgttcctga ctcaagtccg atatgaagat
    24001 caacgtcgat aatgatatgc tcttcttcta aataggcatc taacgcctgt tgattaaaaa
    24061 tggtttggct gctatgattc agaatttcaa tcccgccaat tttaatcgta atattatctg
    24121 gcgcaaaccg gccacctgaa tagccaatcg cgcaaataat acgtccccag ttcccatctc
    24181 caccaaaagc tgccgtcttc acgagactag aggaaacaat ttttttagca atcattcttg
    24241 catcttctgt ttttgtagcg ccattaactt gtacctcgat tagttttgtc gctccctcgc
    24301 cgtctcgcgc gatgctttta gcaaggtgct ccgttaccgc ttgaaacata tccgcaaatt
    24361 tcgcaaaatc cgctgtccct tcctgaagca tcgagttttc tgcacagcca ttcgccatga
    24421 ctaccaccat atcgttggta gaagtatcgc catctaccgt tatttgattg aaagttttgt
    24481 ctacttttat ttttagtaat ttttgcaata attcagccgg gattgcggca tctgttgtaa
    24541 taaaagcaag cattgtcgcc atatttggat gaatcattcc tgatcccttc gctacacctg
    24601 acatcgttac ctttctacca ccaatttctg tttgaaaact gatttgtttt tgaaacgtat
    24661 ctgttgttaa aatcgcttct tcaaaatcgg ccgcatttcc agtttgcttt tctagcattt
    24721 ctattcccgc gttgattttg tccatcggta gcatatcgcc aataattccc gtggaagcaa
    24781 cggctacgta atcaagtgga atatctaact tttctgccgt ttgagcccgc atcgcaagtg
    24841 catctaacat accttgattc cctgtacatg cattggcatt cccactattc acaataattg
    24901 cttgtaactt cgcattactt tgaaaagaat ctttcgttac aaaaattggt gcggcttgca
    24961 tttgattcat cgtataaaca gcggctgcat ttgctggaac ttctgaataa atccaaccaa
    25021 tatcatttcg ttttctttta agccctgcat gttttccgtc agcataaaat ccttttggtg
    25081 aagcgatatt tcctttgaca agttccattt tatttttccc ctttcacgga tacaccggaa
    25141 taaaccttaa tccgtcactt tcagcaaaat tcgccattat gtttaaattt tgaatggcct
    25201 gaccagccgc ccctttaact aaattatcaa tcacagaaac gatagtaatc acattcgttt
    25261 tttcattata agcaagacct atatcacagt aattcgatgc tgtcacttgt ttgacagtcg
    25321 gatatacatt ttctggttgg attcggacaa atggagcatt ctcgtaggtg gatttgtaaa
    25381 gcgtatgtaa ctctttttgg gtgataggat ttttgggttt aacgtagatg gttgtgaaga
    25441 tgcctcttgt gatgggaatt aacgaagtag aaaattgaat tgctgggata gtctcatccc
    25501 atttagttaa ttgttgcata atttctggaa tatgttgatg agaattcatt ttataaagtg
    25561 tcatgttttc attggtttct gtaaaatgag tacttgcaga gggcactttt cctgcgccgg
    25621 aaatacctga tttagcgtct acgataatcg atgttggatc aatcaactgg cttatcacta
    25681 gaggtgctat acctaacaat gttgcagttg cataacatcc aggattagca atgaatctag
    25741 cttctttctt atcacggaat tctgctaaac catattccgc cttagcgata tactcgattg
    25801 gagccgcgct ttttccatac catttttcgt aaagctgcct gtcttttaat cgaaagtccc
    25861 cggatagatc aatgacattc aaacctgcat ctacatatgg gagagcaata tctttcgcga
    25921 ttccagaagg cgtggcaata aaaacggtat cacttttttc gatgatttct gctgaattta
    25981 ttttctctaa ggggctagct tctaaatctt ttaaatgagg ataaaaggtt gcaagtgttt
    26041 ctgattgagc ggaaaaacta tgtaacgtcg ctatgtctac cgaagcatgt tgatgaagca
    26101 agcgaattag ctcaagccct ccgtatcctg ttgcaccaat aatggaaact ttcatccta
//
LOCUS       DASDYO010000025        24781 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.025, whole genome shotgun sequence.
ACCESSION   DASDYO010000025 DASDYO010000000
VERSION     DASDYO010000025.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 24781)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24781)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24781
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.025"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            109..969
                     /locus_tag="U0290_000911"
     CDS             109..969
                     /locus_tag="U0290_000911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GRP family sugar transporter"
                     /protein_id="HEM2300957.1"
                     /translation="MNIMIALIPALLWGTVPLIITKFGGSTRQQTMGMTLGALTFAVI
                     VFFFTDPVYTLKTVGISFITGCLWTVGQMFQLQAFKIIGVSKAMPISTGMQLVGTTLC
                     GVILFHEWDTTLRIILGFIALALIVGGIFLTSYAEKEEDGTNALKQGLITLFISACGY
                     VGLVVLIQGFKIDGINAILPQAIGMVLSALIMTHSGGTEKRFNKRTLLLTIPGIIWAA
                     GNVAMVHANQLVGVATGFSLSQLGVVISTIGGIVLLKEKKTQKEMFFVIVGVVLVVLG
                     GILIGVAKGA"
     gene            1038..3035
                     /gene="metG"
                     /locus_tag="U0290_000912"
     CDS             1038..3035
                     /gene="metG"
                     /locus_tag="U0290_000912"
                     /EC_number="6.1.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine--tRNA ligase"
                     /protein_id="HEM2300958.1"
                     /translation="MLPEEKNTFYITTPIYYPSGKAHIGHAYTTVAGDAMARYKRLKG
                     YDVFYLTGTDEHGQKIQAKAKERGISEQEYVDEIAEGFQELWKKLEISNTDFIRTTQD
                     RHKTSVEKIFEQLLEQGDIYLGEYEGWYSVSDEEYFTETQLEEVYKDENGKVIGGKAP
                     SGNEVELVKEESYFFRMSKYADRLVEYYNSHPEFILPESRKNEMINNFIKPGLEDLAV
                     SRTTFDWGIKVPGNPKHVVYVWIDALSNYITALGYNTDNDTKFQKYWPADVQIVGKEI
                     VRFHTIYWPIMLMALDLPLPKMVFGHGWILMKDGKMSKSKGNVVDPYMLIDRYGLDAL
                     RYYLLREVPFGSDGLFTPEDFVDRVNFDLANDLGNLLNRTVAMINKYFDGEIPAYQGN
                     VTEFDQTLVDFKNNVVKEYEGSMDHMQFSVALNQLWSLISRTNKYIDETAPWTLAKDE
                     DKRTELASVMTHLAENLRIIAVLLQPFLTRTPGEIFLQLGLQEENLKKWDSIYGYGEI
                     PAGTTVVKKGTPIFPRLEAEVEVTYIQDEMKGSAPAPAKEAAEVEALETPQIGIEDFD
                     KIDLRVAEVKQVDKVKKADKLLCFQLDLGEGKLRQVLSGIAEFYQPEELIGKKVIVVS
                     NLKPVKLRGLMSEGMILSGEKDGKLSVIEASSALPNGAKVK"
     gene            3199..4413
                     /locus_tag="U0290_000913"
     CDS             3199..4413
                     /locus_tag="U0290_000913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family transcriptional regulator"
                     /protein_id="HEM2300959.1"
                     /translation="MDILRKGNKDLIKDINRYTVLNLIREKGEITRTEIAKKCDFGMS
                     TLTYILDDLQQEGIILEGAETSSTGGRRAKLVRFNKDYGFVVSVKVEEEQLLFALTDL
                     NAEIMENTSIPFSSEKKPEEAIELIAKNVKKMCENRDMNHLLGVGIAISGLVNRRKGT
                     VIRSTMLGWENVALEAMLHAYFPDIPVYVDKNINCYTLAELWLGEGKQSNNFATVSVG
                     AGLGLSVVINRQIYYGAQGGAGEFGHTTIQPGGYKCHCGQKGCLEMYASEFYFRNRGE
                     ELKEAYPTSELKDFHFDKVAKSARAGDEMATELMGKMGEYLGYGIRNIINTFNPEKVI
                     IVGEGLHHRDLFLTKIDEIASQNFFSGAGFETEITTTSLEDPAWLQGAALLVIHQLFQ
                     VPIYEEEQTLLR"
     gene            4449..5327
                     /locus_tag="U0290_000914"
     CDS             4449..5327
                     /locus_tag="U0290_000914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2300960.1"
                     /translation="MVGMTRKKTLFWLCIFLLPNLLGFLIFIAIPILGSLGISFTDWD
                     LVSTIHFTGFENYKRLFNDPEFWKSFRNTITFIIGYLPSVMILGLACALMLNQKIKLR
                     PFFRAVYFLPVITSWVAVSLVWKWLFNPSYGLINYFLSLIGIAGPNWLTDPQTAMIAV
                     IITSAWKDIGFVMVLFLGGLQNISPSYYEAANMDGASKLRQLFSITIPLLTPTTFFVT
                     IISLINSFQVFDQVMIMTEGGPSGATMTLVQNIYNHAFRYFEMGYASAMSWILFIVIF
                     IITIIQNKLQKRWSNY"
     gene            5327..6175
                     /locus_tag="U0290_000915"
     CDS             5327..6175
                     /locus_tag="U0290_000915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2300961.1"
                     /translation="MKTEKSGSPKWQLFKNILTYTIICLGGIIMLMPFVWMVSTAFKT
                     GAANMVLPPQFIPKEPTTANFTQVFEMFPMLRFLVNSVVVAVVTTLGQMLFCSMAAYA
                     FARIPFWGRDKLFLLYLATMMVPAQVTMIPQFILMKQFGWLDSYAGLIVPALFSVFGT
                     FLLRQAFMGIPKELEEAAFMDGANHFTIFRKVILPLAKPTFATLGILTFMQSWNSYLW
                     PLIVTSSQEMATLPLGLSLLQGRYGTNYGLMMAGVLISVIPILAVYLFAQKYFIQGMA
                     MSGMKE"
     gene            6203..7459
                     /locus_tag="U0290_000916"
     CDS             6203..7459
                     /locus_tag="U0290_000916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEM2300962.1"
                     /translation="MKKGLLLLMVVVLSVFGLSACGGGSSSGDKTEITYYQFSAPADG
                     KALDEMVKEFEKQNPDIKVNVQTIAFNDYFTKLQTQIAGGDAPDAFELNYETFMQYAE
                     KGVLADLTSYIEKDKDFDPSTLNKQAYDAFKYDGKQYGMVESFSNVVTIYNKDLFDKA
                     GVEYPTADWTWKDEEAAAKKLTDAKNKVWGTSQPVTMNEFYKVAAQNGGSIFNEDLTK
                     TTINSPENVAALTHLTNEVTDSKVAPSPADLSGQLPEDLFMNGQIAMLHTGIWLFDMF
                     QDAPFKWDVQVEAGNTQKATHFFANGIGVSKDSDKKEAAFKFASFMSANEEAAKIRID
                     NNWELPATENKEILQPYLDATPPDNREAVFESLQYMVLPPVVKDWNKISDYTNSEFEK
                     VLNGDSTPEKALKNSEDNINKTMGFK"
     gene            7620..10844
                     /locus_tag="U0290_000917"
     CDS             7620..10844
                     /locus_tag="U0290_000917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009925034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 31 protein"
                     /protein_id="HEM2300963.1"
                     /translation="METKPNFTTDSVLETASWLWLSSKINHYDREEVEPVIAFLVENW
                     NRPEKSIWGSAENDIYLATISSVYSALLDVKNTFPKPELQQTITIIRDYCFDNLLKGD
                     SILTGFNTRKVSTDQLLSVLPFGLFSPEDLVMVAAVGKMEQQLVQDDGVLPYSGAPRV
                     NSFATALMALYFLEKSDQDKALHYLNMAMKMEDNDELGAIFIEINQAFRAMESEVTAH
                     ISHDPFGHENRYEQQLTERTPHYPETEMHFSAACEVISEVEPIQVELVLKEKDWTILC
                     EKKEKNDVQIWEALVPPLEEVGEYTYYFRATMKDQTTLTSDDYTVEPIWKHWSEEAAV
                     CETEQGLMVLFKENPSSIIPVEFAAKSDELVIGLKPSFEASNVKTKSSGQLKKDDLEI
                     IVSNNPVRLEVHFKGNLILESHKIYPALQWYTDKAGAINKVKLHLDAPKEEEYYGFGE
                     RYNALGQRGNVLDCFVYNQYRDQGTRTYIPMPFYHTNRDYSVFVDTARYTSFDLGNQL
                     ADKHTITVEINGCDTDICLLMGDIRSAVANYMKKTGKPAMVPVWALGPWMSSNNWDRE
                     SVVRTEVETTQELQIPSTVVVLEQWSDEATYYMFNDAEYDEKAPSEAYNYDEIRFPSW
                     GRWPDPKGMVDYIHDNKMKLILWQIPIQKYLNRQQHPLKDREEAYMIEKGYVVKNPDG
                     SPYRIPENWFTESLIMDFSNEEGKKWWFDKRQYLIDIGVDGFKTDGGEFVFGEGLQFA
                     DGRRGDEMRNLYPNDYVEAYYQFAQQNDGMTFSRAGYTGAQNFPAHWAGDERSTFDAF
                     RRSLIAGLSAGFSGIPFWSFDFAGFNGDIPTAELFIRSAEMATFCPIMQYHAESKAEF
                     NQDRTPWNIASRTGDDSVIPIYRHFANVRMNILPYIYNESLKCVETGLPMMRALLLDY
                     KEDPRVSDMYDQYLFGEAMLIAPVIEDGVRSREVYLPEGTWYDFWNGTKVNGPTLRKC
                     KADKEEIPVFIRGGKAVLCNVDATLKLGSWVGNTVEEYDTPLLKIYVDGDFTEEMTDH
                     LSEKWLVKVTENADEVVVSVQTNTPAYEVEVIGTTKKVQIKKGR"
     gene            10847..13138
                     /locus_tag="U0290_000918"
     CDS             10847..13138
                     /locus_tag="U0290_000918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 31 protein"
                     /protein_id="HEM2300964.1"
                     /translation="MDASTSFAILPSNVKQKTAFERKVNQVKTASWANNCLTGTLDIG
                     QFSCYFVNEKIARVTVNPFGEVDLTPSIAAIHDTEKQAAKFTETTDGYELHFADKEII
                     ICKNPFQIIMKQAGKRIFQTEGLAINRYKEHQISIQSEPGTAIFGLGEKTGALNKAGS
                     IISMWNTDVYSPHNKDTVELYQSIPFMIADTAETTYGLFYDNSHRTEFDFQSFEEMYT
                     ILAEGGQANLYVIFGEDTKEVVANYTDLTGKTPLPPKWSLGYHQSRYSYTSEEEVERI
                     ANTFKEKKIPLDCVFMDIHYMDDFRVFTFNPDTFPNGPELIARLREQNIDVVPIVDPG
                     IKKDVDYSVYQEGIKHNYFCTKLEGSIYYGDVWPGVSAFPDFLSTTVQHWWGGLHKFY
                     TDLGIRGIWNDMNEPSVFNESKTMDLDVVHNLDGKNVTHKEAHNLYGLYMSKATFEGL
                     KRLVPNERPFSLTRAGYAGVQRYSAVWTGDNRSHWEHLEMSLPMIMNLGLSGVAFTGA
                     DVGGFSSDCTKEMLIRWTQAGAFLPYFRNHCVQDSIYQEPWAFGADAEKIVKQYIELR
                     YAFLPYIYTEFQKTAESGLPLVRPLYMEFKDERDLIQVNDQFMLGENILVAPIVREGQ
                     VKRLVRLPRGLWFNYWTKEQFVGGDYIIADAPIDTMPIYIKAGTILPVGSSVQNTKET
                     QDLTLEVYLDGDVASGYVYNDDGKSYHYESGAASKTTLTATFKNGEVLINATHQGEAN
                     LQHKVTTIQVFGEKTDKITRAGI"
     gene            13142..14803
                     /locus_tag="U0290_000919"
     CDS             13142..14803
                     /locus_tag="U0290_000919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glucosidase"
                     /protein_id="HEM2300965.1"
                     /translation="MKEKDWWKKSVVYQIYPKSFNDSNGDGVGDIQGIIEKLDYLKEL
                     GVDVIWLSPVYDSPQDDNGYDIRDYQKIYEEYGDMATFDQLLQGLHDREMKLVMDLVV
                     NHTSDEHKWFEESRKSKDNPYRDYYFWREENEINNWGSIFSGPAWELDEKTGEYYLHL
                     FSKKQPDLNWENPKLRQDVYNMMKFWLDKGIDGFRMDVINFISKNTDFPDGPVPDGQI
                     YGDAGNDFCNGPRIHEFLQEMNQEVTSKYDVMTVGEMPGASTTDAQIYTNPANNEVDM
                     IFTFEHMNLDSDGDNKWDLKPIYLPDLKENMSEWQVALQENGWNSLYWNNHDQPRIVS
                     RFGNDNRFRVRSAKMLATCLHMMKGTPYIYQGEEIGMTNVHFETLDDYRDIETLNMYK
                     ERKEQGHSHESIMQSIYTKGRDNARTPYQWDNSENAGFTTGTPWLKVNPRYTEINNEE
                     ALKNPDSIFYYYQNLIKLRKTTEIITTGNYRLLLPKDEAIFAYERYTENEKLVVLCNF
                     TEEEQVISDENILNEIQKGSVLVNNVPNIIEGTLRPYEAIVYQIK"
     gene            14876..15673
                     /locus_tag="U0290_000920"
     CDS             14876..15673
                     /locus_tag="U0290_000920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEM2300966.1"
                     /translation="MILLGGILLLFDTHVHLNDEAFDDDIEEVIKRAQENDVTRMAVV
                     GFNKETIDRALELAEKYDFISLIVGWHPTDAITFTDEDLEWLRDLALTHPKVVALGEM
                     GLDYHWDTSPKETQFEVFRKQIRLAKEVNLPIVIHNREATEDVVRILQEEHAEEVGGI
                     MHCFGETVEVMEACLAMNFYISFGGTVTFKNAKLPKIAAQAIPIDRLLIETDAPYLAP
                     TPNRGKRNEPGYVKLVAEKIAELKEMKYSEIATHSTENAKKLFKIKD"
     gene            15965..17179
                     /locus_tag="U0290_000921"
     CDS             15965..17179
                     /locus_tag="U0290_000921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="resuscitation-promoting factor"
                     /protein_id="HEM2300967.1"
                     /translation="MTMENSSNVAQSSKWKLPIMIAGFVIVVALVFYFVFEGTKNDIT
                     IVNAGEKIESRTHAKTVSEALDEAGIKVSERDEIAPGKNAEIKDGMEIKYLPARQITI
                     NDNGTKKDVWSTKANVADLLKDENITTRPQDVLNVALDTKLKNGLEVNINRAIQLSLQ
                     NGAKKDTVWTTKTKVSDLLAEKNIKLDQDDRVSPAKDSNLKEKMTVEVTYVNSKAEKK
                     NEQVKFETVYKEDDSLNKGVEKVVQEGKNGEKVVEYKVTFENGKEKKRDVIKENVTSK
                     KTDKVVVRGTKEKVVATPVSNVSTPSTTSSSSSTPSGGKTYRMESTAYSGGGTTAYGI
                     NLSANPGLKVIAVDPRIIPLGSKVWVEGYGEAIAGDTGGAIKGNIVDVYFPNESQCYS
                     WGRRMVTVKVLN"
     gene            17281..17856
                     /gene="rnmV"
                     /locus_tag="U0290_000922"
     CDS             17281..17856
                     /gene="rnmV"
                     /locus_tag="U0290_000922"
                     /EC_number="3.1.26.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease M5"
                     /protein_id="HEM2300968.1"
                     /translation="MNGKPVIHEFIVVEGRDDTTAINRSVIADTIETNGSALSQETIE
                     KIRHAQELRGVIIFTDPDFPGEKIRKQIDSAVPGCKHAFINRQDALPKAGRGLGVEHA
                     SSANIREALENFHTSGTPAEKQFISKDILIHLGLLGGAGAKERREKIGNILKIGYTNG
                     KQLQTRLESFAISEDQLVAACQKIMQEEENE"
     gene            17849..18736
                     /gene="rsmA"
                     /locus_tag="U0290_000923"
     CDS             17849..18736
                     /gene="rsmA"
                     /locus_tag="U0290_000923"
                     /EC_number="2.1.1.182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (adenine(1518)-N(6)/adenine(1519)-N(6))-
                     dimethyltransferase RsmA"
                     /protein_id="HEM2300969.1"
                     /translation="MSKDIATPGRTTEILKKYGFLFKKSLGQNFLIDSNILTRITDTA
                     EITKETNVIEIGPGIGALTEQLAKTANEVVAFEIDQRLLPILDDTLSAYNNIQVVHGD
                     VLKADVEEVIAEQFAKPDLPLKIVANLPYYVTTPIILKLLHDNIPADSMTFMLQKEVA
                     DRISAVPSTKSYGSLTIAIQFYMEAELAFIVPKTVFMPQPNVDSAVIHLKRRKEPLAE
                     VNDEEFFFEVTRASFAQRRKTLWNNLASKFPALKPRKDDLVEGLNAIGIDLIRRGETL
                     DIPEFAKLSNFLGDFLKGK"
     gene            18856..19113
                     /locus_tag="U0290_000924"
     CDS             18856..19113
                     /locus_tag="U0290_000924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Veg family protein"
                     /protein_id="HEM2300970.1"
                     /translation="MPKTIASIKTNLDSRLGKALTLKANGGRKKTIERCGILAETYPS
                     VFIVELDQDENNFERVSYSYTDILTDAVELVFTDDNKELAL"
     gene            19252..20133
                     /locus_tag="U0290_000925"
     CDS             19252..20133
                     /locus_tag="U0290_000925"
                     /EC_number="2.7.1.148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="4-(cytidine
                     5'-diphospho)-2-C-methyl-D-erythritol kinase"
                     /protein_id="HEM2300971.1"
                     /translation="MKISITAPAKINLSLDALYKREDGYHEVEMVMTTIDLADRLYLE
                     RLDEDKIVLDVKAHFIPEDRRNLIYQAALLLKKRFDVKMGVRITIDKHIPVSAGLAGG
                     SSDAAAALKGLNVIWELGLSIEELAEISSEIGSDIAFCVYGGTALATGRGEKISALPN
                     IPGCWIVLAKPSISVSTPTIYKELQVDNVEHPDTQKMIESIKNGDLDGIFASTGNVLE
                     SVTLEKNPQVKRIKDRMLAFGAEAALMSGSGPTVFALIKQYSRAKRVYNGLRGFCEEV
                     YMVRPWSEGENDTNINN"
     gene            20155..20892
                     /gene="chbG"
                     /locus_tag="U0290_000926"
     CDS             20155..20892
                     /gene="chbG"
                     /locus_tag="U0290_000926"
                     /EC_number="3.5.1.105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitin disaccharide deacetylase"
                     /protein_id="HEM2300972.1"
                     /translation="MKIIFNADDFGISPGAVYGILESYKRGVVKSTTLLANSPAFDLA
                     VEVAKENPGLDIGAHLTLTFGSPVLQGLETLTDDDGRFRRNYTSLENGLADVDMNEVE
                     RELTAQIEKILDAGITISHFDTHHSIEPLIYPVQHKLAEKYGVSIRRHSDVSDFGAIK
                     TPDLFATEFYADGVSFETIKKLVQKHIGTNDVVEVMTHPAFIDETLREISSYVEPRIK
                     EVSILTSRELQAYLGQQEVEIISFRDL"
     gene            21056..21874
                     /gene="purR"
                     /locus_tag="U0290_000927"
     CDS             21056..21874
                     /gene="purR"
                     /locus_tag="U0290_000927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pur operon repressor"
                     /protein_id="HEM2300973.1"
                     /translation="MKIRRSERLIDMTQFLLSHPRKLVPLTMFAERYGSAKSSISEDL
                     VIIKKTFEDRGIGTLETVPGAAGGVQYISIAGNDDVLDFVHTLCNRIAEPNRLLPGGY
                     LYLSDLLGEPVTLKAIGKILATKFNNQKIDAIMTVATKGIPIAQAVAEHLSVPFVIVR
                     RDSKVTEGSTVSINYVSGSSKRIEKMELSKRSLAEGSNVVIVDDFMKAGGTINGMKNL
                     LEEFNAHLVGIGVLVESEYAEERLVDDYVSLVKIKNVNMKEKQIEVVDGNYFNS"
     gene            22049..22726
                     /locus_tag="U0290_000928"
     CDS             22049..22726
                     /locus_tag="U0290_000928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyD family secretion protein"
                     /protein_id="HEM2300974.1"
                     /translation="MKKWVKWLIVIVIIAVVAVGAVFLLSKNSGSVTQEKLVTAKVKQ
                     GDMKINATGTGAISPVNTQVPDYDELQLVAQMDELDIPNIKKDQEVKVTVTALPDKTY
                     TGKVKEIAEQGQVQNGVSSFSVIISLDKTDDLKAGMTADASILVNEKKDALYVPIEAV
                     QKDSDDKYYVLVPEEKDNGKTKKVKKFVETGLHNEDNIEITKGVKKGEKVILPTQETS
                     TVPGAPS"
     gene            22775..23467
                     /locus_tag="U0290_000929"
     CDS             22775..23467
                     /locus_tag="U0290_000929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2300975.1"
                     /translation="MPKPLIDMKNLTKTYTLGGETFKALDDVTFTVEQGEFLSIVGPS
                     GSGKSTLMNMIGCLDVPDEGSYHLDDVDVFKLSDNKLSEIRNKKIGFIFQQFNLLPKL
                     SAFENVELPLIYAGLSVSAREKAAIECLEKVGLLEKRRNLPTQLSGGQQQRVAIARAL
                     AGKPQILLADEPTGALDSKTGKEVMGILQELNRAGNTIVMITHDPTIASYGTRSIRIQ
                     DGKLFHEEATQA"
     gene            23464..24672
                     /locus_tag="U0290_000930"
     CDS             23464..24672
                     /locus_tag="U0290_000930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2300976.1"
                     /translation="MNVLQSMKMAWKQLKASKLRSFLTMLGIIIGVASVILLVSLGNG
                     VTQEVDDQMGDLGSNLITVVNSSVNPNDKYTYDEVMKYQNIDGVKSVSPELSGQVNAT
                     FDYKNSSNKVIGTNDQYKAARSLEMKEGRFLLPIDTEYGQKVAVIGSTVASDLFGFGD
                     PIGETIRLNGMPYKVVGVLKEKGASMMGSSDDQIFIPISSAQRLLKDTNVRTIYVETK
                     SAEDVDFVVNTLESRLAIKFGDEKEQEKNASSAQMGPSYQVINQQEILNAFNTISTTL
                     TTALGAIAAISLVVGGIGIMNIMLVSVSERTREIGIRKALGAKKRAILLQFLIESIVI
                     SVCGGIIGIIIGVSGALIFGSVAGISSGITAGTIIFSFVFSLCIGVIFGIAPANKASK
                     LRPIDALRSE"
BASE COUNT         8331 a         4283 c         5229 g         6938 t
ORIGIN      
        1 gcgctattaa gtacttttac tcagaaaacc tctaccatct tcttgttatt tcagctataa
       61 tgaagtaatt gaaaactaaa ttaaaggatt aacaaggagg aaaacgattt gaacattatg
      121 attgcgctga ttcctgcatt actctgggga acagtaccgc taattattac aaaatttggc
      181 ggttcaacaa gacaacaaac gatgggaatg acactagggg cactcacttt tgcggtaatc
      241 gttttcttct ttactgaccc agtttatacg cttaaaacag taggaattag ttttataaca
      301 gggtgtttat ggactgtggg tcaaatgttc caactgcaag cattcaaaat tatcggtgtt
      361 tcaaaagcaa tgccgatttc tacagggatg caattagtcg gaacaacact ttgtggggta
      421 atcttatttc atgaatggga tacgacactt cggattattt taggttttat tgcacttgca
      481 ctaattgttg gcgggatttt cttaacatcc tatgctgaaa aagaagaaga tggaactaac
      541 gcattaaaac aaggtttaat cacattattc atatctgctt gtggttatgt tggcttagtc
      601 gttctaattc aaggtttcaa aatcgatgga attaacgcaa tcttgccgca agcgattggg
      661 atggttttaa gtgcgctaat tatgacgcat agcggtggta cggaaaaacg tttcaataaa
      721 cgaacactct tacttactat tccagggata atctgggcgg ctgggaacgt tgcgatggtt
      781 cacgctaacc aacttgttgg cgttgcgact ggtttttcac tttcgcaact cggagttgtt
      841 atctcaacta ttggcggaat cgtactttta aaagaaaaga aaacacaaaa agaaatgttt
      901 tttgttattg tgggcgtagt tttagtcgtt ctcggcggga ttttaatcgg cgttgcaaaa
      961 ggtgcttaat taattatttc gtttagcgcg aaaaatgata taatgatact aattgtttta
     1021 tttttaagga gggaattgtg ttgcctgaag agaaaaatac gttttatatt accacaccaa
     1081 tctattatcc aagcggaaaa gcgcatatcg gccatgctta tacgactgtt gcgggggacg
     1141 cgatggctcg ttataaacgc ttaaaaggat atgatgtgtt ttacttaact ggaacagatg
     1201 agcacggtca aaaaatccaa gcaaaagcga aagaacgcgg aatttctgaa caagaatacg
     1261 tggatgaaat cgcagaaggt ttccaagaac tttggaaaaa actagaaatt tctaatacgg
     1321 attttattcg tacaacacaa gaccgtcata aaacatcggt tgaaaaaatc tttgaacaac
     1381 ttttagaaca aggcgacatt tacttaggtg aatacgaagg ttggtactct gtttctgatg
     1441 aagaatactt tacagaaaca cagttagaag aagtatataa agatgaaaat ggtaaagtaa
     1501 tcggcggaaa agccccaagt ggcaatgaag tcgaactagt gaaagaagaa tcctacttct
     1561 tccgtatgag caaatatgcg gaccgtttag tagaatatta taattcccat ccagaattta
     1621 tccttcctga atctagaaaa aatgaaatga ttaataattt catcaaacct ggtttggaag
     1681 atttagctgt atctagaaca acttttgatt ggggtattaa agttcctggc aatccaaaac
     1741 acgttgttta tgtatggatt gacgcgcttt ctaactatat tactgcgctt gggtataata
     1801 cggacaatga cacgaaattc caaaaatact ggcctgctga tgtacaaatc gttgggaaag
     1861 aaatcgttcg tttccacacg atttattggc caattatgct gatggcacta gacttaccac
     1921 ttccaaaaat ggtgttcggc cacggctgga ttctaatgaa agatggtaaa atgtctaaat
     1981 ccaaagggaa tgtagtagat ccttatatgc tgattgaccg ctacggccta gatgcgcttc
     2041 gttattactt attacgcgaa gttccatttg gttcagatgg tttatttaca ccggaagact
     2101 ttgttgatcg tgtgaacttt gatcttgcca acgatttagg aaacttactt aatcgtacag
     2161 tagcaatgat taataagtac tttgatggcg aaattccggc ttatcaaggc aatgtaacag
     2221 aattcgatca aaccttagtg gatttcaaaa acaatgtggt gaaggaatat gaaggtagca
     2281 tggatcacat gcaattctct gtagctttaa accaactgtg gtcactaatt tctcgtacaa
     2341 ataaatatat cgatgaaacc gctccatgga cacttgccaa agacgaagat aaacgcacag
     2401 aacttgcgag cgtaatgact catttagcag aaaacttacg tattatcgca gtgcttttgc
     2461 aaccattctt aacaagaact ccaggcgaaa tcttcttaca actaggttta caagaagaaa
     2521 acttgaaaaa atgggatagc atctatggat acggtgaaat tccagctggc acaacagtgg
     2581 tgaaaaaagg tacgccaatt ttcccaagac ttgaggcaga agtagaagtt acttatatcc
     2641 aagatgaaat gaaaggctct gcgccagctc ctgccaaaga agcggcggaa gttgaagcgc
     2701 ttgaaacacc gcaaatcggc attgaagatt tcgataaaat cgatcttcgt gttgcagaag
     2761 taaaacaagt agataaagtg aaaaaagcag ataaacttct ttgtttccaa ttagacttag
     2821 gggaaggaaa actgcgccaa gtgctttcag gcattgcaga attctatcaa ccagaagaac
     2881 taatcggcaa aaaagttatc gtcgtttcta acttaaaacc tgtaaaactt cgcggactaa
     2941 tgagtgaagg aatgatactc tcaggcgaaa aagatggtaa gctaagtgta atcgaagcaa
     3001 gtagcgcact tccaaatggt gcaaaagtaa aatagtaaaa acgagtccta attcatttga
     3061 gttagggctc ctttttttcg cctaaaaaaa cttttaaaaa aagattgcat attgcaaacg
     3121 attacaatat aatgtaacta tacttactta attcattgaa cgaagtaagt ggtcggacag
     3181 aagtaaagga gcttgaaaat ggatatctta agaaaaggga ataaagactt aattaaagac
     3241 ataaaccgct acaccgtgct gaatttaatc cgtgaaaaag gagaaatcac gcggactgag
     3301 atagccaaaa aatgcgattt tgggatgtct acattaacgt atattttaga tgatttacag
     3361 caagaaggca ttattttgga aggtgccgaa acatcatcta ctggaggcag acgtgccaag
     3421 ttagttagat ttaataaaga ttatggattt gttgttagtg tcaaagttga agaggaacaa
     3481 cttctttttg cgttgaccga tttaaatgca gaaatcatgg aaaatacttc tataccattt
     3541 tcctcagaga aaaaaccaga agaagcgatt gagttaattg ctaaaaatgt gaaaaagatg
     3601 tgtgaaaaca gagatatgaa ccatttgcta ggagttggaa ttgcgatttc cggcctagtt
     3661 aatcgtagaa aaggaacagt tatccgctct actatgttag ggtgggaaaa tgtcgcttta
     3721 gaagcaatgc tacatgctta cttcccagat attccagtgt acgtagataa aaatataaac
     3781 tgctacacac tcgcggaact atggttaggt gaaggaaaac aatcaaataa ttttgcaaca
     3841 gtttccgttg gagctggact tggtttatcc gttgttatta atcgtcaaat ttattatggt
     3901 gcacagggtg gagccggtga atttggacat acaacgattc aaccgggcgg atacaaatgt
     3961 cactgtggtc aaaaaggatg cttagaaatg tacgcatccg aattttattt ccgaaatcgt
     4021 ggcgaagaat taaaagaagc ttatccaaca tcagaattaa aggattttca ttttgataaa
     4081 gtagcaaaaa gtgctcgagc tggagacgaa atggcgacgg aacttatggg taaaatgggt
     4141 gaatatttag gatacgggat tcgaaatatc attaatacct tcaatccaga aaaagttatc
     4201 attgtcggtg aaggtttgca ccatagagac ttattcttaa ctaaaattga tgaaattgct
     4261 tcacaaaact ttttttcagg ggctggcttt gaaacggaaa ttactacaac ttctttagag
     4321 gatcctgcat ggttacaagg tgcggcttta ctagtcattc accaattatt ccaagtgcca
     4381 atctatgaag aagaacaaac gttactacgt taaaaagaac ataaactatt tcaggaggtt
     4441 atttttacat ggttggtatg actagaaaga aaacactctt ttggctatgc atattcttgc
     4501 tacccaattt actaggtttt ctcattttta ttgcaatccc aatccttggc tcgcttggta
     4561 ttagttttac cgattgggac ttagtgagta ctattcactt tactggattt gaaaattaca
     4621 aaaggctatt taatgaccca gagttttgga aatcgtttag aaatacaatc acgttcatca
     4681 tcggttattt gcctagtgta atgattcttg gcctagcgtg tgccttgatg ttgaaccaaa
     4741 aaatcaaact aagaccattt ttccgagcag tgtacttctt acccgtaatc acttcatggg
     4801 tagctgtttc actcgtttgg aaatggctgt tcaatccttc atacggtttg atcaattact
     4861 tcttatcttt aattggtatt gcagggccca actggttaac agatccacaa acggcgatga
     4921 ttgcagttat tattactagt gcgtggaaag atattggttt cgttatggta ctattccttg
     4981 gtggattgca aaatatttca ccatcgtatt acgaagctgc caatatggac ggagcatcaa
     5041 aacttcgcca attattctct attactatcc cgcttcttac tcctactaca ttctttgtga
     5101 cgataatttc gcttatcaac tcattccagg tgtttgacca agtgatgatt atgacagaag
     5161 gtggtccaag tggagcgaca atgaccctag tccaaaatat ttacaaccat gcatttagat
     5221 acttcgaaat gggctatgct tccgcgatga gttggatatt gtttattgtt attttcatca
     5281 ttacaattat tcaaaataaa cttcaaaaaa ggtggtccaa ttactaatga aaacagaaaa
     5341 aagtggttca ccaaaatggc aactatttaa aaatattctt acctatacaa tcatctgtct
     5401 tggtggaatt atcatgctta tgccgtttgt ttggatggta tcaactgcat tcaaaacagg
     5461 cgcagcgaac atggtattac cgccgcaatt tattcctaaa gaaccgacaa ctgcgaactt
     5521 cactcaagta tttgaaatgt tcccaatgtt gcgattttta gttaactccg tggtcgttgc
     5581 agttgtaacg acacttggtc aaatgctgtt ttgttcaatg gcagcgtatg cttttgccag
     5641 aattcctttc tggggtcgcg ataaattatt tttactttac ttagcaacaa tgatggtgcc
     5701 agctcaagtt acaatgattc cgcagtttat cttgatgaaa caatttggct ggttggattc
     5761 gtatgctggt ttgattgtac ccgcactatt cagcgttttt gggacattct tattacgtca
     5821 agcattcatg ggaattccga aagagctaga agaagctgca ttcatggacg gtgccaatca
     5881 ttttactatt ttccgaaaag ttatcttacc acttgcaaaa cctacttttg cgacactcgg
     5941 aattttaact tttatgcaat cttggaacag ttatttatgg ccattaatcg tgacaagttc
     6001 acaagaaatg gcaactttac ctttaggatt atctctttta caaggtagat atggaacgaa
     6061 ttatggctta atgatggcgg gtgtactaat tagtgttatc ccgattctag cagtgtacct
     6121 ttttgctcaa aaatatttca tccaaggaat ggcaatgagc ggaatgaaag aataaaaaac
     6181 caacaaaaaa ggagtgttac aaatgaaaaa aggtttatta ttgttaatgg tagttgtact
     6241 gtctgtattt ggtctttcgg cttgcggcgg tggcagtagt agtggcgata aaacagaaat
     6301 aacgtattat caattctctg caccagctga tggaaaagca cttgatgaaa tggtaaaaga
     6361 atttgaaaag caaaacccgg atattaaagt aaacgttcaa acaatcgcat ttaacgacta
     6421 tttcactaaa ctacaaacac aaatcgcagg tggagatgct ccggatgcct ttgaacttaa
     6481 ctacgaaaca ttcatgcaat atgctgaaaa aggtgtactt gcagatttaa caagctatat
     6541 cgaaaaagat aaagattttg atccatctac acttaacaaa caagcctacg atgctttcaa
     6601 atatgatggc aaacaatacg gtatggtaga aagtttctcc aacgttgtaa caatttacaa
     6661 taaagacctt tttgataaag ccggcgttga atatccgaca gctgactgga cttggaaaga
     6721 cgaagaagcg gcagcaaaaa aattaacaga tgctaaaaat aaagtttggg gaacttccca
     6781 accagtaaca atgaacgaat tctacaaagt agcagcgcaa aatggtggtt cgattttcaa
     6841 cgaagactta acgaaaacaa ctatcaacag tcctgaaaat gtggcagcat taactcactt
     6901 aacaaatgaa gtaacagatt caaaagtggc gccttcacca gctgatttat ctggccaatt
     6961 accagaagat ttatttatga atggtcaaat cgcaatgctt cacaccggta tttggttgtt
     7021 cgatatgttc caagatgctc cgttcaaatg ggatgtacaa gtagaagcag gaaacacgca
     7081 aaaagcaact cacttcttcg caaacggcat tggtgtttct aaagactccg ataaaaaaga
     7141 agcagctttc aaattcgctt ccttcatgag cgcgaacgaa gaagcagcga aaatcagaat
     7201 tgataataac tgggaacttc cagcgactga aaacaaagag attttacaac catatttaga
     7261 tgcaactcct ccagataaca gagaagcagt attcgaatct ctacaatata tggtattacc
     7321 tccagttgta aaagattgga acaaaatcag tgattataca aactctgaat tcgaaaaagt
     7381 attaaatggc gattctactc cagaaaaagc actgaaaaac agcgaagaca acatcaacaa
     7441 aacaatggga tttaaataag taaaacgagt ggcagggacg tttgtaagta tctttacaaa
     7501 ttagactgcc actttagtat atccaagaaa ggaaatagaa catgtctaaa ttcacaaaat
     7561 taatgcaggg ttacttgcat ttaatagaag gaaaaaacga aaaaatcaaa ccaatcctgc
     7621 tggaaacaaa acctaacttt acaactgatt cagtccttga aaccgcttct tggctatggc
     7681 ttagcagtaa aatcaatcat tatgatagag aagaagtaga gccagtaatt gcatttttag
     7741 ttgaaaactg gaatcgtcct gaaaagtcta tttggggttc agctgaaaat gatatttatt
     7801 tagcaactat ttcaagtgta tactctgcat tattagatgt gaaaaacact tttccaaaac
     7861 cggagttaca acaaacgatt acaattatcc gcgactattg ttttgataat ttattaaaag
     7921 gcgatagcat tcttactggt tttaacacgc ggaaagtgtc aaccgaccag cttttatccg
     7981 tgcttccgtt tggtctattt tcgcctgaag atcttgtaat ggtggcggct gttggcaaaa
     8041 tggaacaaca attagtgcaa gatgatgggg tattgcctta ttcaggagca ccaagagtta
     8101 attcctttgc aacggctcta atggcgctat atttcttaga aaaaagtgac caagataaag
     8161 ctttacacta tttgaatatg gcaatgaaga tggaagataa tgacgaactt ggcgcgattt
     8221 ttattgaaat taaccaagca ttccgggcga tggaaagtga agtgacagcg catatttcac
     8281 acgatccttt tgggcatgaa aatcgctatg agcaacagtt aactgaacgc acgccacatt
     8341 atcccgaaac agaaatgcat ttttcggctg cgtgtgaagt tatttctgaa gtcgaaccaa
     8401 tccaagtcga actcgtctta aaagagaaag actggaccat tctatgtgag aagaaagaaa
     8461 aaaatgatgt ccaaatctgg gaagcgctcg ttccaccgtt agaagaagtt ggcgagtata
     8521 cgtattattt ccgggcaaca atgaaagacc aaaccacttt gacatcagat gattatacag
     8581 tcgaaccaat ttggaaacac tggtcagagg aagcggcagt ttgtgaaaca gagcaaggct
     8641 taatggtttt atttaaagaa aatccatcaa gtatcatccc ggtcgagttc gccgcgaaat
     8701 cagatgaact tgtaatcgga ttaaaacctt catttgaagc gagcaatgtt aaaacaaaat
     8761 catccggcca attgaaaaaa gatgatttag agattatcgt ttcaaacaat ccagtgcgtc
     8821 tcgaagtaca ttttaaaggc aacttaattc tagaatcgca taaaatttac ccagcgttac
     8881 agtggtatac agataaggct ggcgcaatca acaaagtgaa actgcattta gatgccccga
     8941 aagaagaaga gtattacggc ttcggtgaac gatacaatgc attaggtcag cgcgggaatg
     9001 tgcttgattg ttttgtttat aatcaatacc gtgatcaagg aacaagaacc tacatcccga
     9061 tgccgtttta tcatacgaat cgtgattata gtgtgttcgt tgataccgct cgttacacaa
     9121 gttttgattt aggtaaccaa ctagcggaca agcatacaat tacagtagaa ataaatggct
     9181 gtgacacaga tatttgtctt ttaatgggag atattcgtag tgcagtagca aattatatga
     9241 agaaaactgg gaaaccggcg atggtgccag tttgggcgct tgggccgtgg atgtctagta
     9301 acaactggga ccgtgaatct gtcgttcgaa cagaagtgga aacaacgcaa gaattgcaaa
     9361 tcccatcaac cgttgtcgtg ttagaacaat ggagcgatga agcgacttat tatatgttca
     9421 atgacgccga atatgacgaa aaagccccat ctgaagcata taattacgat gaaattagat
     9481 tcccttcatg gggtagatgg ccagatccaa aagggatggt tgactatatc catgacaaca
     9541 aaatgaagtt aattctttgg caaattccga ttcaaaaata cttaaatcgc caacaacacc
     9601 cactaaaaga ccgcgaagaa gcctatatga ttgaaaaagg ctatgtggtg aaaaatccgg
     9661 atggctcgcc ataccgtatt ccagaaaatt ggttcacaga aagcttgatt atggatttct
     9721 ccaatgaaga aggaaaaaaa tggtggtttg acaaacgaca atacttgatt gatattgggg
     9781 tcgatggctt taaaacagac ggcggcgaat tcgtctttgg tgaaggtttg caatttgctg
     9841 atggtagacg tggtgatgaa atgcgtaatc tttatccaaa tgactatgtg gaagcttact
     9901 accaatttgc acaacaaaat gatggcatga catttagtcg tgctggctac actggcgcgc
     9961 aaaacttccc ggcgcactgg gctggagacg aacgttccac ttttgatgca tttagaagat
    10021 cgctcattgc tggactttcc gctggatttt cgggaattcc gttttggagt tttgactttg
    10081 caggttttaa cggcgatatt ccgacggctg agctattcat tcgttctgct gaaatggcta
    10141 ctttctgccc gattatgcag tatcatgctg aaagtaaagc ggaatttaat caagaccgga
    10201 caccgtggaa cattgcttca cggactggtg acgactcggt catccctatt taccgccatt
    10261 ttgcgaatgt tagaatgaat attttacctt atatttataa tgaatcatta aaatgtgttg
    10321 aaactggctt gccaatgatg cgtgcgcttc tgctggacta taaagaagat ccgcgtgttt
    10381 ctgatatgta tgaccaatac ttattcggag aagcaatgct gatcgcacca gtaattgaag
    10441 acggcgtgcg ctccagagaa gtttatctgc cagaaggaac ttggtatgat ttctggaatg
    10501 gaacaaaagt gaacggacca actttacgaa aatgcaaagc ggataaagaa gaaattccag
    10561 ttttcattcg tggtggaaaa gcagtgctat gtaatgtgga cgctacattg aaactcggct
    10621 catgggttgg caacacagtg gaagaatacg atacaccact acttaaaatt tatgtggacg
    10681 gtgatttcac agaagaaatg acggatcact tatccgaaaa atggctagta aaagtaacgg
    10741 aaaatgcgga cgaagtagtt gtttctgttc aaacaaacac accggcatat gaagttgaag
    10801 taatcggcac gaccaaaaaa gtacaaataa agaaagggag ataatgatgg atgcttccac
    10861 aagttttgcg attctaccat ctaatgtaaa acaaaaaaca gctttcgaaa gaaaagtaaa
    10921 tcaagtgaaa acggctagtt gggcgaataa ttgcctgact ggcacacttg atatcggtca
    10981 gttcagttgc tattttgtta atgaaaaaat tgctcgcgtg acggtgaacc catttggaga
    11041 agtggattta acgccttcga ttgctgcgat tcacgatacg gaaaaacaag cggctaaatt
    11101 tacagaaaca acggacggct atgagcttca ttttgcggat aaagagatta ttatttgtaa
    11161 aaatcctttc caaattatta tgaaacaagc tgggaagcgt attttccaaa cagaaggatt
    11221 ggcaattaat cgctataaag aacaccaaat ttcgattcaa agcgaaccag gaaccgcgat
    11281 ttttggttta ggtgaaaaaa cgggtgcctt gaataaagcc ggttccatta ttagtatgtg
    11341 gaacacggat gtatacagtc cacataataa agatacagtg gagttatacc agtccattcc
    11401 tttcatgatt gcggatactg cggaaacaac ctatggctta ttttatgata attcgcatcg
    11461 tacagaattt gatttccaaa gttttgaaga aatgtatacg attttagcag aaggtggaca
    11521 agcgaattta tatgttattt ttggtgagga cacgaaagaa gttgtcgcga attacactga
    11581 tttaactggt aaaacaccac ttccaccaaa atggtcatta ggttatcatc aatcaaggta
    11641 tagctacacc tcggaagaag aagtggaacg gattgcgaat acttttaaag aaaaaaagat
    11701 tccgcttgac tgtgtattca tggatataca ttacatggat gatttccgcg tattcacttt
    11761 taacccggat acttttccaa atggaccaga attgattgcg cgtcttcggg aacaaaatat
    11821 tgacgttgta ccaattgtcg atccgggaat taaaaaagat gttgattatt ctgtttatca
    11881 agaggggatc aaacataatt atttctgcac taaattagaa ggttcgattt attatgggga
    11941 tgtttggccg ggtgtcagtg ctttccctga ttttctaagt acaactgttc aacattggtg
    12001 gggcggttta cacaaatttt acacagattt aggtatacgc gggatttgga atgatatgaa
    12061 tgagccgtct gtattcaatg aaagtaaaac gatggattta gatgttgtgc ataatctgga
    12121 cgggaaaaat gtaacccata aagaagcgca taatttatat ggattgtata tgagtaaagc
    12181 tacttttgaa gggttaaaac ggcttgtgcc aaatgaacgt ccattttcac tcactcgtgc
    12241 tggttatgcg ggtgttcagc gttattcggc ggtttggaca ggagataatc gtagtcactg
    12301 ggagcatttg gagatgtcgc tgccgatgat tatgaattta ggattatcgg gcgttgcgtt
    12361 taccggtgct gatgttggtg gattttcttc agattgtacg aaagaaatgt tgattcgttg
    12421 gacgcaagct ggggcttttt taccatattt cagaaatcac tgtgtacaag atagtattta
    12481 tcaagagcca tgggcgtttg gcgcggatgc agagaaaatt gtgaaacaat atattgaatt
    12541 gcgctatgcc tttttaccgt atatttatac agaattccaa aaaacggcag agagtggttt
    12601 accgctcgtt cggccgcttt atatggagtt taaagatgaa cgcgatttaa ttcaagtgaa
    12661 tgatcaattt atgctaggtg aaaatatcct cgttgcgcca atcgttcgtg aaggccaagt
    12721 gaagcgtcta gttcgtttgc caagagggct ttggtttaat tattggacaa aagagcagtt
    12781 cgtgggcggc gactatatta tcgcagacgc gccgattgat accatgccaa tttacattaa
    12841 agcggggaca attctgccag ttggtagcag cgttcaaaat acaaaagaga cgcaagattt
    12901 gacattagaa gtttacttag atggcgacgt agcaagcggt tatgtgtata atgatgatgg
    12961 taaaagttac cattatgaaa gcggcgcagc atccaaaaca acactcacag ctactttcaa
    13021 aaatggcgaa gtactaataa atgctaccca tcaaggtgaa gcaaacttac aacataaagt
    13081 aactactata caagtttttg gagaaaaaac agacaaaatt acaagggcgg gaatttaatc
    13141 tatgaaagaa aaagattggt ggaaaaaaag cgtagtgtac caaatctatc caaagagttt
    13201 taatgattca aatggtgatg gagttggtga tattcaagga attatcgaga aattagatta
    13261 tttaaaagag ctaggtgtgg acgttatctg gttgtcccca gtatacgatt cgcctcaaga
    13321 tgacaatggt tacgatattc gcgattatca aaaaatttac gaagagtatg gagatatggc
    13381 gacttttgat caattacttc aaggtttaca cgaccgcgaa atgaaacttg taatggatct
    13441 tgttgttaac catacttctg atgaacacaa gtggtttgag gaatccagaa aatccaaaga
    13501 caacccgtac agagattact atttctggcg cgaggaaaac gaaatcaata actggggctc
    13561 gattttcagc ggtccagcat gggaattgga cgaaaaaaca ggtgagtact atttacacct
    13621 gttctccaaa aaacagcctg atttaaactg ggaaaaccct aaattacgcc aagatgtata
    13681 taatatgatg aaattctggc tagataaagg cattgatggc ttccgcatgg atgtaattaa
    13741 ttttatttcc aaaaatactg atttcccaga tggtccagta ccagatggtc aaatttatgg
    13801 cgatgctggc aatgattttt gtaatggacc gcggattcat gagttcttgc aagaaatgaa
    13861 ccaagaagtt acttctaaat acgatgtgat gactgttggc gaaatgcctg gtgctagtac
    13921 aaccgacgcg caaatttaca cgaatccagc aaataatgaa gttgatatga tttttacatt
    13981 tgaacatatg aacttagatt ccgatggcga caataaatgg gatctaaaac caatctactt
    14041 accagattta aaagaaaata tgtctgaatg gcaagtggcg cttcaagaaa acggttggaa
    14101 tagcttatat tggaataatc atgaccaacc gcgtatcgtt tctcgttttg ggaatgacaa
    14161 tcgtttccgc gttcgttcag cgaaaatgct tgcaacttgt ttgcatatga tgaaaggaac
    14221 gccatatatt tatcaaggtg aagaaattgg gatgacgaat gttcattttg aaacgctaga
    14281 tgattaccgt gatatcgaaa cgctaaacat gtacaaagag cgtaaggagc aaggacacag
    14341 ccatgaaagc atcatgcagt cgatttacac aaaaggccgt gacaatgcga gaacgccgta
    14401 ccagtgggat aatagcgaga atgctggctt cacaaccgga acgccttggc ttaaagtcaa
    14461 cccgcgctat acagaaatca acaacgaaga agcgctgaaa aacccagatt ccattttcta
    14521 ctactaccaa aatcttatta agttacgaaa aacgactgaa atcatcacaa ctggtaatta
    14581 tcgtttgtta ttacctaaag atgaagcgat tttcgcatat gaacgctaca cagaaaatga
    14641 aaaattagtg gttttatgta atttcacaga agaagaacaa gttatttctg atgaaaacat
    14701 tttgaacgaa atccaaaaag gttccgtgct tgtaaacaat gttcctaata ttatagaagg
    14761 aactttacga ccttacgaag caatcgttta tcaaatcaag taaatctcag gaaagccacc
    14821 aattgttagg tggctttttt tgtatgcgtc aaaaattata gtataataga aggaaatgat
    14881 tttattagga ggaattctct tgctatttga tacgcatgta cacctcaatg acgaggcttt
    14941 tgatgatgat atagaagaag taataaaacg cgcacaggaa aacgatgtga ctcgcatggc
    15001 cgtggtgggc tttaataaag aaacaattga ccgagcgctt gaattagccg agaaatatga
    15061 ttttatctca ttaatcgtcg gctggcatcc cacagacgct attaccttca cagatgaaga
    15121 tttagaatgg ctccgcgatt tagcacttac acacccgaaa gtagttgctt taggcgaaat
    15181 gggcttagat tatcactggg atacttcgcc aaaagaaacg caatttgagg tttttagaaa
    15241 acaaatccgt ttagcgaaag aagtgaattt accgatagtt attcacaacc gcgaagcaac
    15301 agaagatgtt gttcgtattt tgcaagaaga gcacgctgaa gaagtaggtg gaattatgca
    15361 ttgctttggt gaaactgtcg aagtaatgga agcatgtcta gcgatgaatt tttacatttc
    15421 attcggagga acagtcactt ttaaaaacgc aaaattacca aaaattgcag ctcaagctat
    15481 accaattgac cgtttattaa ttgaaactga cgcgccgtat ctcgctccaa ccccaaatcg
    15541 cggaaaaaga aatgaacccg gatacgtcaa gttagttgcc gaaaaaattg cagaactgaa
    15601 agaaatgaaa tatagtgaaa tcgctacgca ctcaacagaa aacgcaaaaa aactatttaa
    15661 aataaaagat tgattgtaac acaattgtaa tataagggcc agtctgtaac ccaatcttaa
    15721 gcttcacgga gataaaaatg atgactggga caaaaaccct tattttatgc ctacgaccag
    15781 agatgtagaa aaatgacaca tttctgttac atttgacact ttaaaagaat aatattttta
    15841 aaaacggctc tatatcaacg ttttttgtta aagtttgcga aggtgtgaac aatctgtata
    15901 aaaaattgac agttcttccc tcccctgtat ataatcacta gcgaagtaga aaggggagaa
    15961 atacatgacc atggaaaaca gcagtaacgt agcccaatca tcaaaatgga aattaccaat
    16021 catgattgca ggatttgtta ttgtagtagc attggttttt tatttcgttt tcgaaggaac
    16081 taaaaacgat atcactatag taaatgctgg tgaaaaaatt gaatcaagaa cacatgcgaa
    16141 aactgtttca gaagcattag acgaagcagg tattaaagta agtgaacgcg atgaaattgc
    16201 gccaggcaaa aatgcagaaa tcaaagacgg catggaaatt aaatatttgc cagctcgtca
    16261 aattacaata aatgataatg gtactaaaaa agacgtttgg agcacaaaag caaacgtagc
    16321 agacttgctt aaagatgaaa atattacaac tcgtccgcaa gatgtattaa acgtagcatt
    16381 agatactaaa ttgaaaaatg gccttgaagt taacattaat cgtgccattc aactttcctt
    16441 acaaaacgga gcaaaaaaag atacagtatg gacaacaaaa acaaaagtta gtgatttact
    16501 agctgagaaa aatattaaac ttgatcaaga tgaccgtgtg tcacctgcaa aagacagtaa
    16561 cttaaaagaa aaaatgactg tagaagttac atatgtcaat tcaaaagcag aaaagaaaaa
    16621 tgaacaagtt aaattcgaaa cagtatataa agaagatgat agcctaaaca aaggcgttga
    16681 aaaagtcgtt caagaaggta aaaacggcga aaaagttgtt gagtataaag taacatttga
    16741 aaatggcaaa gagaaaaaac gtgatgtcat taaagaaaat gtcacttcta aaaaaactga
    16801 taaagtagtt gtacgtggca cgaaagaaaa agtggtagca acaccagttt ctaacgtatc
    16861 tactccaagt acaacgtcat catcatcatc aactccatca ggtggtaaaa catacagaat
    16921 ggaatctact gcatattcag gtggcggtac tacagcttat ggtatcaacc taagtgccaa
    16981 ccctggacta aaagtaattg cggttgatcc acgaattatt ccacttggct ctaaagtttg
    17041 ggttgaggga tacggagaag caatcgctgg agatactggc ggcgctatca aaggaaatat
    17101 cgttgacgtg tatttcccaa atgaaagtca gtgctattca tgggggagaa gaatggtgac
    17161 tgtcaaagtg ttaaactaaa ttcgtataaa aacgaggctg actcataggg cctcgttttt
    17221 tctttgtcca aaatgtggta tgatatattt acttatttta taaaaaagga tgtagtaatt
    17281 atgaacggga agcctgtaat acatgaattt atagtcgtag aaggacggga cgatacaacg
    17341 gcaattaatc gttcagttat tgctgatacc attgagacta atggatctgc cctttcacaa
    17401 gaaacaatag aaaagattag acatgcacaa gaacttcgcg gcgttattat ttttacagat
    17461 ccagattttc ccggtgaaaa aatccgaaaa caaattgact cagcggtacc tggctgtaaa
    17521 cacgctttta tcaatcgcca agacgctttg ccaaaagcag gtcgtggcct tggagtggaa
    17581 catgccagta gcgctaatat tcgggaagca ctcgaaaact tccatacaag tgggacgcct
    17641 gcagaaaaac aatttatctc caaagatatt cttattcatc tcggtcttct tggaggagcg
    17701 ggagcgaaag aacgccgaga aaaaatcggt aatatactaa aaattggcta tacaaacgga
    17761 aaacaactgc aaaccagact agaatcattt gcaatcagtg aagaccagtt agtagccgcg
    17821 tgccaaaaga ttatgcagga ggaagaaaat gagtaaagat attgcaactc ccggaagaac
    17881 gacagaaatc ctaaagaagt atggtttctt atttaaaaaa agtctgggtc aaaacttttt
    17941 aatcgacagt aacattttga cacggattac agatacagcc gaaataacaa aagaaacaaa
    18001 tgtcatcgaa atcggaccag gtatcggcgc gctaacagaa caattagcaa aaacggcgaa
    18061 cgaagtagtt gcttttgaaa ttgatcaacg tttactgcca attcttgacg atacgctaag
    18121 tgcatacaat aatatccaag tggtccacgg agacgtgcta aaagcagatg tggaggaagt
    18181 tatcgcagag caattcgcga agccggatct accactgaaa atcgtagcca accttccgta
    18241 ttacgtaact acaccgatta ttttaaaatt actccatgac aatattccgg cagattcgat
    18301 gacgtttatg ctccaaaagg aagttgcgga ccggataagc gcagttccaa gcacgaaaag
    18361 ctacggaagc ctaacaatcg ctatccaatt ttacatggaa gcagaactag cctttatcgt
    18421 gccaaaaact gtcttcatgc cgcaaccgaa tgttgattcc gcagtaattc atctgaagcg
    18481 tcgcaaagaa ccattagctg aagtaaacga cgaagaattt ttctttgaag taacaagagc
    18541 ttcgtttgct cagagaagaa aaacgctttg gaataattta gcttcaaaat tcccggcttt
    18601 aaaaccacgc aaagacgatt tggtagaagg tctaaatgct attgggatag acttaatccg
    18661 tcgcggagaa acgttggata ttccggaatt tgctaaatta agcaactttt taggtgattt
    18721 tttaaaggga aaataatttt tttcaaaaaa agcgctttct tagttgacag ttagcccttc
    18781 caactgttaa aatatttggt tattgatttc ggagccgaac tatgctataa tggatattag
    18841 tgaggtggaa aataaatgcc aaaaaccatt gcaagcatta agacgaattt agattctaga
    18901 ttaggtaaag cattgacatt gaaagcaaac ggtggtcgta agaaaacgat tgaacgttgc
    18961 ggtatcctag ctgaaacata tccatccgtt ttcattgtgg agcttgatca agatgaaaac
    19021 aactttgaaa gagtatccta tagttacacg gatatcttaa cagacgcagt agaacttgta
    19081 tttacagatg ataataaaga attagcttta taataaagct gaagtagccg aaccatatag
    19141 cgtggttcgg tttttgctat acatagaagt tgttttgggc cgctagctac atattttttc
    19201 tttcatatga tagaatagaa aaagagattt tgaacgcgga ggccaagaaa aatgaaaata
    19261 agcattacag caccagctaa aattaatctt tcacttgatg cgctgtacaa acgtgaggac
    19321 ggctatcatg aagtggaaat ggtgatgaca acaatcgacc ttgctgatag attatactta
    19381 gaacgcttag acgaagacaa aattgtgctg gatgtaaaag cacactttat tccagaagat
    19441 cgtcgcaatt taatttatca agcagccctc cttttaaaga agcgttttga cgtaaagatg
    19501 ggtgtgcgca ttacaattga taagcacatt cctgtttctg cgggtcttgc tggtggtagt
    19561 tcagatgcag ctgcagcgct caaaggatta aatgtcattt gggaacttgg tctttcaata
    19621 gaagaattag ccgaaattag ttcggaaatt ggttctgata tcgctttttg cgtatacggc
    19681 ggaacagcgc tagcaactgg gcgcggggaa aagatttctg cgttacctaa tattcctggt
    19741 tgttggattg tgcttgctaa accgagcatt agcgtgtcta ccccgactat ctataaagaa
    19801 cttcaagtag ataacgtaga acacccagac acacaaaaaa tgattgaatc cattaaaaat
    19861 ggcgatttag acgggatatt tgcgtctaca ggaaatgtat tagagtctgt gacattagaa
    19921 aaaaatccgc aagttaaacg aataaaagat cggatgttag cgtttggtgc tgaggcggcc
    19981 ctaatgagtg gtagcggtcc gacagtgttt gcgcttatca aacagtactc cagagcaaaa
    20041 cgtgtctata acggcttgcg tggcttttgt gaggaagttt atatggttag accatggagt
    20101 gaaggcgaga acgatacaaa tataaataat taatgaatga gaggggtcaa agaaatgaaa
    20161 attattttta atgcagatga ttttggaatt agcccgggag cagtttatgg tattttagag
    20221 tcttataagc gaggcgttgt gaaatctacc acgcttcttg ctaatagccc ggcatttgat
    20281 ttggcagttg aagttgcgaa agaaaaccca ggtctcgata ttggtgcgca tttgaccctg
    20341 acgttcggtt ctccagtcct tcaaggttta gaaacgctaa cggatgatga tgggcgtttc
    20401 cgcagaaatt atacctcact tgaaaacggc ttagctgatg tagatatgaa tgaggtggag
    20461 cgcgagttaa ctgcacaaat cgagaaaatt ttagatgcag gaatcactat ttctcatttt
    20521 gatacacatc attcaattga gccgctaatt tatcccgtac aacataaact tgcggaaaaa
    20581 tacggtgtga gcattcgacg tcattctgat gtttcggact tcggtgctat aaaaactcct
    20641 gacttattcg ctacggagtt ttatgcagac ggtgtatctt ttgaaacgat taaaaaatta
    20701 gtacaaaagc atatcggaac gaatgatgta gtcgaagtga tgactcatcc ggcatttatt
    20761 gatgaaacgt tgcgcgaaat atctagttac gtagagccgc gcatcaaaga agtttcaatt
    20821 ctaacttcaa gagaactaca agcatattta ggccaacaag aagtagagat tattagtttc
    20881 cgcgatttat aagagcatgg gcctgtcaaa ggatgtttat ttggcaggct tttcgttagg
    20941 ttaaaataat aaatgttgtc aattttatag aaaacgtttt ataatagaga aaatacggac
    21001 aaaatacgtg aaatagcttt ttaatatacg gaattttatc aaagggagag agattatgaa
    21061 gattcgtcgc agtgaacgat taattgatat gacgcagttt ctattatcgc atccgcgaaa
    21121 gttagtgccg cttacgatgt ttgctgaacg ttatggctca gctaagtctt ctattagtga
    21181 agatttggtt atcataaaga aaacatttga agacagaggg attggtacgc tcgaaactgt
    21241 tccgggtgct gctggtggtg tgcaatatat ttcgatagcg ggaaatgacg atgtgctgga
    21301 ttttgtgcat acgctatgta atagaattgc ggaaccaaac cgtttgcttc cagggggcta
    21361 tttgtactta tctgatttac ttggagaacc agtaacgctc aaagcaattg gtaaaatttt
    21421 agcaacgaaa ttcaataacc aaaaaataga tgcgattatg actgttgcga caaaagggat
    21481 tccgattgca caagcggttg ctgaacattt aagtgtcccc tttgttatcg tacgtcgtga
    21541 tagcaaagtg acagaaggct caactgtaag cattaactat gtttcaggtt catccaaacg
    21601 aatcgaaaaa atggaattat ccaaacgaag cttagctgaa ggctctaatg tagtaattgt
    21661 ggatgacttt atgaaagctg gaggaacaat taatggtatg aaaaatctgc tagaagaatt
    21721 caacgcgcat ttagttggaa ttggcgtgtt agttgaatcc gaatatgcgg aagagcgctt
    21781 agtggatgat tacgtatctc ttgtaaaaat aaaaaatgtg aacatgaaag aaaaacaaat
    21841 cgaagttgtt gatgggaatt actttaatag ttgattctaa accctggaaa atattctggg
    21901 gtttttcttt tttgggggcg aattgctact aaaaacaaat cagtcttccg atgtacttca
    21961 ctcagttaac ttttatggta gaatgaattc tatcgttact acataaaatt caaggcttct
    22021 agactttagg agcagaagga gaacattcat gaaaaagtgg gttaaatggt taattgttat
    22081 cgtaattatc gcagtagtag ccgttggtgc ggttttcttg ctgtcgaaaa atagtggctc
    22141 cgtaacacaa gaaaaattag ttacagccaa agtaaaacaa ggagatatga aaatcaatgc
    22201 tacaggaaca ggcgcgattt ctccggtaaa cacacaagtt ccagattacg atgaacttca
    22261 attagtagcg caaatggacg aacttgatat tcctaacatc aagaaagacc aagaagtaaa
    22321 agtcacagta acagcactac ctgacaaaac ttatacagga aaagtgaaag aaatcgcaga
    22381 acaaggtcaa gtacaaaatg gtgtgtctag cttctctgta atcatttctc ttgataaaac
    22441 agacgattta aaagcgggta tgactgctga tgcttccatt ttagtaaatg agaaaaaaga
    22501 tgcactatac gttccaattg aagctgttca aaaagacagt gacgacaaat attacgtatt
    22561 agttccagaa gaaaaagaca atgggaaaac gaaaaaagtg aagaaatttg tagaaactgg
    22621 tcttcataat gaagataata tcgaaatcac taaaggtgtt aaaaaaggcg aaaaagtaat
    22681 ccttcctaca caagaaactt ctacggttcc tggtgctcct agctaagttt tttgtaagta
    22741 caaatcagac aaattgtatg aaggagggat aaacatgcca aaaccgctaa ttgacatgaa
    22801 aaatttaaca aaaacgtata cgctaggcgg agaaactttt aaagcattag acgatgttac
    22861 ttttaccgtt gagcaaggcg agtttttatc catcgttggt ccgtccggtt ccggtaaatc
    22921 cactttaatg aatatgattg gttgtttgga tgttccggat gaaggcagct atcaccttga
    22981 tgatgtagat gtttttaaac tgagcgataa taaactatcc gaaatcagaa ataaaaaaat
    23041 cggctttatt tttcagcagt ttaatttgct tccaaaatta tctgcctttg aaaatgtgga
    23101 actaccacta atttatgcag gactaagtgt ttctgcacga gaaaaagccg caatcgaatg
    23161 tttagaaaaa gtaggcttac ttgaaaaacg tagaaactta ccaacgcaac tttctggtgg
    23221 ccaacagcaa cgtgtggcta tcgcaagagc actcgccggc aaaccgcaaa ttttgctagc
    23281 agatgagcca actggtgcgc tcgattcgaa aacaggtaaa gaagtaatgg gaatcctaca
    23341 agaattgaat cgtgctggaa acaccatcgt tatgattacg catgatccaa caatcgcctc
    23401 atacggtaca agaagtatcc gtattcaaga tggtaaatta ttccatgagg aggcgacgca
    23461 agcatgaatg ttctccaaag catgaaaatg gcatggaaac aattaaaggc aagtaaatta
    23521 aggtcttttc taaccatgct aggtattatt attggtgtcg catccgttat tcttttagta
    23581 tctctaggga atggtgtaac gcaagaagtt gatgaccaaa tgggcgattt gggttcgaat
    23641 ttaattacag tagttaatag ctctgttaat ccaaacgaca aatatacgta tgatgaagta
    23701 atgaaatatc aaaacattga tggagtcaaa agcgtttctc cagaattatc tggacaagtc
    23761 aatgcaactt ttgattataa gaattcaagt aataaggtga taggcacgaa tgaccaatat
    23821 aaggccgcgc gtagcctaga aatgaaagaa gggcgtttcc tactaccgat tgataccgaa
    23881 tatggccaga aagtagctgt aataggctct acggtagcaa gtgatctatt tggttttggg
    23941 gatccgattg gcgaaaccat tagattaaac ggaatgcctt acaaagttgt tggtgtcttg
    24001 aaagaaaaag gcgcgtctat gatgggatcg agcgatgacc aaatctttat tccgatttct
    24061 tccgctcaaa ggctcctaaa agatacaaat gtccgtacaa tctatgtaga aacaaaatct
    24121 gccgaagatg ttgattttgt agtaaacaca ctagaatcac gtcttgcgat taaatttggt
    24181 gacgaaaaag aacaagaaaa aaatgcgtca tccgcacaaa tgggaccatc ttatcaagtc
    24241 attaatcaac aagagattct caatgctttc aacacgatta gtacaacgct aactactgcg
    24301 cttggtgcga ttgctgctat ttcacttgtt gttggtggta ttggaattat gaatattatg
    24361 ctagtttctg ttagtgagcg aacgagagag attggtataa gaaaagcgct cggagctaaa
    24421 aaacgagcca tcctgttaca attcctaatt gaatccattg ttattagtgt ctgtggtggg
    24481 attatcggta ttattatcgg ggtctcagga gcgctcatat ttggctcagt cgcaggtata
    24541 tcgtcaggaa taactgcagg aaccattatc ttctccttcg tattctcact atgtatcgga
    24601 gtgatatttg gtatcgcacc tgctaataaa gcttcgaaat taagaccaat tgacgcatta
    24661 agatccgaat aaataaaaga agcctgaaat aagctgtttc gggcttcttt ttttactaaa
    24721 attagctact aagttgtctt gtcatctata tttaatcttt ttgtcacaat taaacgcttt
    24781 c
//
LOCUS       DASDYO010000026        24336 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.026, whole genome shotgun sequence.
ACCESSION   DASDYO010000026 DASDYO010000000
VERSION     DASDYO010000026.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 24336)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24336)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24336
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.026"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            208..1740
                     /gene="mpl"
                     /locus_tag="U0290_000931"
     CDS             208..1740
                     /gene="mpl"
                     /locus_tag="U0290_000931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloproteinase Mpl"
                     /protein_id="HEM2300977.1"
                     /translation="MKSKLICIIMVIAFQAHFNMAVKADSVGEERLRNNIQAKRNPAD
                     LKALPDSCEAKDFYKNFKILDMTKDKLGVTHYTLALSSDGYLTDNDEIKVHVTPDNKI
                     AFINGDLQQGQLRITNQIKITEKNAIEKAFEAIGQSEAHVKSYIGNPVKEKEIIINSR
                     TKRLVYNIKLIFAEPEVASWIIQVDAETGAILKKQNMLSEVERADTHKDFQALGKGAN
                     RLLQRPLHVMKINDLFYLVDRTHKGLIRTFDLNHKTDASFGKVVSNKTNMFTDPEFSS
                     AVDAHFYASEVYDYYKNVHQLESLDGKGGEIDSFVHYGLNCNNAFWDGREILYGDGDK
                     KNFKPFSCAKTIVGHELTHAVIQYSAGLEYEGQSGALNESFADVFGYFIAPNHWLIGE
                     DVCVRGLRDGRIRSIKDPDKYNQAAHMKDYESLPITEEGDWGGVHFNSGIPNKAAYNT
                     ITKLGKEKTEQLYFRALKYYLTKKAQFTDAKKALQQAAKDLYGEDASKKVAEAWEAVG
                     VN"
     gene            1940..3859
                     /gene="actA"
                     /locus_tag="U0290_000932"
     CDS             1940..3859
                     /gene="actA"
                     /locus_tag="U0290_000932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="actin assembly-inducing protein ActA"
                     /protein_id="HEM2300978.1"
                     /translation="MGLNRFMRAMMVVFITANCITINPDIIFAATDSEDSSLNTDEWE
                     EEKTEEQPSEVNTGPRYETAREVSSRDIEELEKSNKVKNTNKADLIAMLKAKAEKGPN
                     INNNNSEQSENVAINEEASGSDRPAIQVERRHPGLPSDSAAEIKKRRKAIASSDSELE
                     SLTYPDKPTKATKKKVAKASVTDTSESDLDSSMQSADESTPQPLKANQQPFFPKVFKK
                     IKDAGKWVRDKIDENPEVKKAIVDKSAGLIDQLLTKKKNEEVNASDFPPPPTDEELRL
                     ALPETPMLLGFNAPATSEPSSFEFPPPPTDEELRLALPETPMLLGFNAPATSEPSSFE
                     FPPPPTEDELEIMRETAPSLDSSFTSGDLASLRSAINRHSQNFSDFPPMPTEEELNGR
                     GGIPTSEEFSSLNSGDFTDDENSETTEEEIDRLTDLRDRGTGKHSRNAGFLPLNPFTS
                     SPVPSLTPKVSKISAPALITDVTKKAPFKNPPQPLNVFNKKTTTKTAPKKITPVNTAP
                     KLAALPITKAQETELGENKAPFIEKQAETNNRPIDMPSLPVIQKEVTERNKEEMKPQT
                     EEKVVGESEPANNVNGKKRSAGIEEGKLIAKSAEDEKAKEEPVNHTTLILAMLAIGVF
                     SLGAVIKIIQLRKNS"
     gene            3895..4764
                     /gene="plcB"
                     /locus_tag="U0290_000933"
     CDS             3895..4764
                     /gene="plcB"
                     /locus_tag="U0290_000933"
                     /EC_number="3.1.4.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylcholine phospholipase C"
                     /protein_id="HEM2300979.1"
                     /translation="MKFKKVVLGMCLTASVLVFPVTIKASACCDEYLKPPAAPHDIDS
                     KLPHKLSWSADNPTNTDVNTHYWLFKQAEKILAKDVDHMRANLMNELKNFDKQIAQGI
                     YDADHKNPYYDTSTFLSHFYNPDKDNTYLPGFANAKITGAKYFNQSVADYREGKFDTA
                     FYKLGLAIHYYTDISQPMHANNFTAISYPPGYHCAYENYVDTIKHNYQATEDMVVKRF
                     CSNDVKEWLYENAKRAKADYPKIVNAKTKKSYLVGNSEWKKDTVEPTGARLRDSQQTL
                     AGFLEFWSKKTNE"
     gene            4836..5159
                     /locus_tag="U0290_000934"
     CDS             4836..5159
                     /locus_tag="U0290_000934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463737.1"
                     /note="This small protein, a possible lipoprotein, is
                     found in Listeria monocytogenes; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5502 family protein"
                     /protein_id="HEM2300980.1"
                     /translation="MYIKGRLIFFFVMFVIALCSVLILLIIKMSVWKEEPFNLSDAKE
                     IECLGSCKIKNTNQKIHFFSIKKNLFEEKGNMAGILNEHERKGADKSIFIVILDDEKG
                     IANEE"
     gene            5292..5753
                     /locus_tag="U0290_000935"
     CDS             5292..5753
                     /locus_tag="U0290_000935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YehR family lipoprotein"
                     /protein_id="HEM2300981.1"
                     /translation="MKMLKKGTTVLFVMIMAVMLVACGDKEETKTYSLSQNGVDSKLT
                     YTYKGDKVTKQTAENTMSYASLGVASKEDAEKMLKATSDKFQGIDGLKEKIEYKDDKA
                     IETLEVDYTKISSEDMNKIPGMSSNGDTSKGISMEESAKMLESQGYKEVSK"
     gene            complement(5806..6138)
                     /locus_tag="U0290_000936"
     CDS             complement(5806..6138)
                     /locus_tag="U0290_000936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putative heavy metal-binding protein"
                     /protein_id="HEM2300982.1"
                     /translation="MIVTTSPNIEGKQIIEYKKIVFGEVITGVNFMKDIGAGLRNFFG
                     GRSQGYEDELINAREEAIREMEQRAKDIGANAVIGVDIDYEVLGADNGMLMVTASGTA
                     VVIEAQDY"
     gene            complement(6205..6924)
                     /locus_tag="U0290_000937"
     CDS             complement(6205..6924)
                     /locus_tag="U0290_000937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HEM2300983.1"
                     /translation="MLFLLYLIYSRGVTRTITFDQLNTELQALENPNTIKIFRNHGCP
                     DSLDLYGLKIGDLKKIIRREKLTKNHELAVELIESNNSDLIYLGLLAINPDKITTEQI
                     EKWNIIFRETWSQLTFGLASIVSKRDDALLFAKTWIESDYDLTKSMGWQIYSEHINNL
                     PEAEALLQRAKETLQTETNRTRYSMNGFIITCGIYKDDLHEKAMEAAKSVGKVHVNLG
                     NTACKVPDAISYIEKARNRTK"
     gene            complement(6957..7898)
                     /locus_tag="U0290_000938"
     CDS             complement(6957..7898)
                     /locus_tag="U0290_000938"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEM2300984.1"
                     /translation="MKDHQKIILVGDGAVGSSYAFACVNLSIGQEFGIIDIDKDRTIG
                     DAMDLSHAVPFSTPKKIYSANYSDCHDADLVVVTAGTAQKPGETRLDLVNRNIKIMKG
                     IVDEVMASGFDGIFLIASNPVDILTYATWKFSGLPKERVIGSGTSLDTARFRMSIADY
                     LKVDARNVHGYILGEHGDTEFPAWSHTTVGGLPITEWISEDEQGAMDTIFVSVRDAAY
                     EIINKKGATFYGVAAALARITKAILNNENAILPLSVYLDGHYGMNDIYIGAPAVVNRQ
                     GVRHIVEMNLNDKEKEQMKNSADTLKKVLDDAMKQID"
     gene            8192..8815
                     /locus_tag="U0290_000939"
     CDS             8192..8815
                     /locus_tag="U0290_000939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L25/general stress protein
                     Ctc"
                     /protein_id="HEM2300985.1"
                     /translation="MATTLEVQKRETTQHSEVTRLRSEGKVPGIIYGYKSENVPVSVD
                     SLELIKAVRDNGRNAVFSVTVDGKKLNVLLHEYQVDPLKDVLVHVDLLAVDMNEEVET
                     DVRVVLVGDAPGVKAGGVLQQIIHDVKVSATPEKLPETIELDISSLEIGDVLTTNDLP
                     ENKDYVVQAEEEETVVTVSAPRAEEEPTTTEAPEPEAVHGKDEEPVE"
     gene            8905..9489
                     /locus_tag="U0290_000940"
     CDS             8905..9489
                     /locus_tag="U0290_000940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2300986.1"
                     /translation="MLDKSVPHISAIMVNHDATNYPEFHLPEGYSFCFYKDGLEEDWC
                     RLQLETGQVLSMDSIRARFETEFGNEKEKLAKRCVFVEAPNGEIIGTAMLWDGNTFGE
                     MASRIHWVAVLDSHGGKGIAKALLSKILGLNKSSFVYLTTQTGSYQAIYLYQKFGFEK
                     YVGKTPENWKTVNFQEEKEAAWQIIENKIAEHQA"
     gene            9596..10156
                     /locus_tag="U0290_000941"
     CDS             9596..10156
                     /locus_tag="U0290_000941"
                     /EC_number="3.1.1.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminoacyl-tRNA hydrolase"
                     /protein_id="HEM2300987.1"
                     /translation="MKLIAGLGNPGKKYERTRHNVGFMVVDELSFRHQTPWKKSKFNG
                     MTSEIIVGGEKMILVKPLTFMNASGECIRPLMDYYNIPIEDVVIVYDDLDLPVGKIRL
                     RQKGSAGGHNGMKSIIQHVKTQEFNRIRVGVSRPLKGEVIHYVLGDFPKAEQPDIIAA
                     IQKSADAIEDFAQTPFIEVMNKYNQK"
     gene            10270..13809
                     /gene="mfd"
                     /locus_tag="U0290_000942"
     CDS             10270..13809
                     /gene="mfd"
                     /locus_tag="U0290_000942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription-repair coupling factor"
                     /protein_id="HEM2300988.1"
                     /translation="MKGLQQLIYEQKDIRAVLNALDEKEKAQLVTGLTGSSRALFASV
                     VEGASKRPVVFVTHNLYHAQKLYDDLLSLMDVDRLFLYPADELISSELSISSPELRGQ
                     RVEALDFLLSGKPGIVIVPVAGLRKMLPPVSLWKHFNISIVEGEEIDPDVLRQKLVTM
                     GYTMSGMVNTPGEFSVRGGIIDIYPITEEFPIRIELFDTEVDSLRFFDVETQRSTTRV
                     EEFRLLPATEIILDQSYYPDIVKRLEKKMTHTLNELKENEDKQALVENLEEDLEMLRS
                     GVKPDMFFKYIGLAYPDPASLFDYFPKNTAILLDEFGRILETEESLEREEAEWQTETL
                     SRMETVRDVQVSHSFKKLLEANHSPKIYLSLFQKQMASMRVSKTTNIVYKQMQQFHGQ
                     MNVLKTELESWHKNNYAVVILAPNLERAEKMQQTLTDYDMESAILKKESDVPKYGMVQ
                     FVIGTFQNGFELPLAKVAIISETELFNKKIKKVKKRQKLSNAERIQSYSELKVGDYVV
                     HVNHGIARYVGMETLDINGVHKDYLLLVYQGEDKLFIPVDQLDLVQKYVGAEGKSPRL
                     NKLGGAEWKRVKKKVQASVQDIADDLIKLYAEREAEKGYAFSADDEMQREFEEAFPYQ
                     ETEDQLRSISEIKKDMERPRPMDRLLVGDVGYGKTEVALRAAFKAIMDGKQVAFLVPT
                     TILAQQHFETMKERFQGFPIEIGLLSRFRTKKQQTETLKGMKNGTVDVVVGTHRLLSK
                     DVEYQDLGLLIVDEEQRFGVTHKEKIKQMRSKIDVLTLTATPIPRTLHMSMLGVRDLS
                     VIETPPANRFPVQTYVAEQNNVLVREAIERELARDGQVYYLYNRVESITQKADEISAM
                     VPDARVATAHGQMGESELESVILSFLEGEFDVLVTTTIIETGVDIPNVNTLFVQDADR
                     MGLSQLYQLRGRVGRWNRIAYAYFMYQKDKILREEAEKRLSAIKEFTELGSGFKIAMR
                     DLSIRGAGNILGAQQHGFIDSVGFDLYSQMLKEAIEAKKPKEEQKQIVPVEIDIQADA
                     YIPEYYITDGRQKIEMYKRFRNIETLSELEDLQSDMIDRFGEYPEEVEYLFTMTELKV
                     HALEVSIESVKQEQNKITMLFSESGTAGIRGDIVMQIIGEFGRMVGVGMEGTQLKITI
                     NVQNKPLKEWLYQVKSLAEKLRGAMKERASAEN"
     gene            13840..15429
                     /locus_tag="U0290_000943"
     CDS             13840..15429
                     /locus_tag="U0290_000943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide biosynthesis protein"
                     /protein_id="HEM2300989.1"
                     /translation="MPERSMKRLMKGAAWLTAASLISKILSAVYRVPFQNMVGDVGFY
                     IFQQVYPIYGIAMTLALGGFPVVISKMLAEAEGDVRRQQIIMRAVSRMLRIVSIVIFA
                     FLFLFANPIAIMMGDPALSELIRVISFVFLLMPQLAFMRGFFQGEGDMIPTAISQTVE
                     QIIRVAIILIGAGLALHFNFDLYDAGSMAMSGAFFGGVSGIFILRHFYNKKVRLGEGI
                     QPAVFTNKEEKVGIGRTFLRQSVAICVVSSMLILFQLVDSFQVYRLMSDSGIPDFIAK
                     SLKGVYDRGQPILQLGLVISTGLALALVPMITAARVQDQQKELKRSVLLAIKITLILA
                     GAETIGLIVIMRPLNQMLFQTPDGTFVLQLFMPAVFLSSLIIMLSSILQGFGKITVPA
                     VGVGIGLIVKWVTGGILIPRLATVGASVSTCVGLLVILLICYVSLKQTIRVPFVEKTM
                     LFRLIAALALMAVFPCLFEWLAPLNTRLGSAFQAIVSALVGGGIFLVFSLRYKLLGPK
                     DFVFLPFGSKLLALSKLVARK"
     gene            15453..15731
                     /locus_tag="U0290_000944"
     CDS             15453..15731
                     /locus_tag="U0290_000944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding S4 domain-containing protein"
                     /protein_id="HEM2300990.1"
                     /translation="MATTMRLDKYLKVSRLIKRRTVAKEVAEKGRIAVNGVTAKPGTN
                     VKSGDELVIRFGPKIVTAKIERLEENAKKEQATEMYTIIKEERTDESR"
     gene            15960..16346
                     /locus_tag="U0290_000945"
     CDS             15960..16346
                     /locus_tag="U0290_000945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum formation initiator family protein"
                     /protein_id="HEM2300991.1"
                     /translation="MKKAKSKVARIENRYIKDTATMEKTRSRRRIALFRRLAFMAIIF
                     AVVGGLLTITYTKQVLTLKEKKEKQVQVDKKMVAMKDEQDSLNEQIKKLHNDDYIAKL
                     ARSEYYLSKDGEIIFNIPEENSKQKE"
     gene            16497..16925
                     /locus_tag="U0290_000946"
     CDS             16497..16925
                     /locus_tag="U0290_000946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein S1"
                     /protein_id="HEM2300992.1"
                     /translation="MSIEVGNKLQGKVTGITNFGAFVELEGGKTGLVHISEVADNYVK
                     DINDILTVGDEVTVKVMNIGDDGKIGLSIRKAVDRPDRPEKSYDRKPKYSKKPAGNYV
                     KPAESFEDIMSKFLKDSDERLTTIKRQTESKRGGRGAKRG"
     gene            17032..18978
                     /locus_tag="U0290_000947"
     CDS             17032..18978
                     /locus_tag="U0290_000947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional tRNA lysidine(34) synthetase
                     TilS/hypoxanthine phosphoribosyltransferase HprT"
                     /protein_id="HEM2300993.1"
                     /translation="MDDTDKRVHKYIEKHDLIRSDDKLLVAVSGGPDSLALLHFLWNS
                     NLVPKEAISVAHINHHLRENAANEQNVVEAFCESQGIPFYIEEVDVKSRAESLQKGIE
                     ETARIVRYDFFEKVMAEKKINKLALAHHADDQIETILMRLVRGSASIGWSGIQPKREL
                     KGGQAIRPFLPITKAEIIDYAQKHELAYEIDESNTSQEYTRNRYRAQLLPFLKQENPA
                     VYSHFERFSEETSEDFQFLEALASDLLKKNLIKNGKRTTLLLTNFKNEANPLQRRAIH
                     LLLRYLYNEDASFITVNHIYQIIQMIQSDNPSSSIDLPNKLVANRAYDKLHFQFGERE
                     APSEFYHQLELNDRIELDNKASIRLKLKSSVVQTNGLNGMLLDAEEITLPLIVRNRVN
                     GDRMTMKGQAGSKKLKDIFIDAKIPRQERDKLPVITDYTGKILWVPGVKKSAYDREFS
                     RSKKQYIIRYTRNIGGNESMHNDIQKVLISEDELQEKIRELGRELTTEYEGRNPLVVG
                     VLKGATPFMTDLLKRVDTYLEMDFMDVSSYGNGTVSSGEVKIIKDLNASVEGRDVLVI
                     EDIIDSGRTLSYLVDLIKYRKAKSVKLVTLLDKPAGRNVEIEADYVGFVVPNEFVVGY
                     GLDYAERYRNLPYIGILKPEIYSE"
     gene            19325..21400
                     /gene="ftsH"
                     /locus_tag="U0290_000948"
     CDS             19325..21400
                     /gene="ftsH"
                     /locus_tag="U0290_000948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent zinc metalloprotease FtsH"
                     /protein_id="HEM2300994.1"
                     /translation="MNRFFRNAIFYVIIFLVIIGIVASFNSNKEAAKDISYSEFVSKL
                     EDGKVKSVEIQPDRSVYTINGEFKSSDKSSDDKKTGLGQSKTSSTAFTTYALNSDTSL
                     GDLQKTLDKEDVKTTIVPAKQNSGWVTFLTSIVPFVIIFILFFFLMSQSQGGGGGKVM
                     SFGKSKAKLYNDDKKKVRFTDVAGADEEKQELVEVVEFLKDPRKFADLGARIPKGVLL
                     VGPPGTGKTLLARAVAGEAGVPFFSISGSDFVEMFVGVGASRVRDLFENAKKNAPCII
                     FIDEIDAVGRQRGAGMGGGHDEREQTLNQLLVEMDGFGGNEGIIIIAATNRADVLDPA
                     LLRPGRFDRQIMVDRPDVKGREAVLRVHARNKPLAKSVDLKAIAQRTPGFSGADLENL
                     LNEAALVAARSDKKEIDMSDLDEASDRVIAGPAKKNRVISEKERRTVAYHEGGHVIVG
                     MVLDEAEVVHKVTIVPRGQAGGYAVMLPKEDRFLMTKAELMDRITGLLGGRVAEEVTF
                     GEVTTGASNDFERATELARRMVTEWGMSDKIGPLQFTSGNGQVFMGRDFGSDKGYSDK
                     IAYEIDTEVQSLIRYCYDRAKTIITEHQEQHKLIAETLLKVETLDARQIRSLFDDGVM
                     PPDIDTIDVEAEYPSEKDEEVAGKSFEEEKEELKEEEKIEEPKEEPKEVTSEDAPNIE
                     QTPNDKKDE"
     gene            21516..22295
                     /locus_tag="U0290_000949"
     CDS             21516..22295
                     /locus_tag="U0290_000949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type III pantothenate kinase"
                     /protein_id="HEM2300995.1"
                     /translation="MILVIDVGNTNCTVGVYEKQKLLKHWRMTTDRHRTSDELGMTVL
                     NFFSYANLTPSDIQGIIISSVVPPIMHAMETMCVRYFNIRPLIVGPGIKTGLNLKVDN
                     PREIGSDRIVNAVAASEEYGTPVIVVDFGTATTFCYIDESGVYQGGAIAPGIMISTEA
                     LYNRAAKLPRVDIAESNQIIGKSTVASMQAGIFYGFVGQCEGIIAEIKKQSNASPVVV
                     ATGGLARMITEKSSAVDILDPFLTLKGLELLYRRNKPTTEK"
     gene            22311..23195
                     /gene="hslO"
                     /locus_tag="U0290_000950"
     CDS             22311..23195
                     /gene="hslO"
                     /locus_tag="U0290_000950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Hsp33 family molecular chaperone HslO"
                     /protein_id="HEM2300996.1"
                     /translation="MSDYLVKALAYDGMARVYAAVTTETIKEAQRRHDTWSVSSAALG
                     RTMTGTLFLGAMQKEDQKITVKIEGDGPIGPIVADSNAQGQIRGYVTNPHVHFSELNE
                     AGKLDVRRGVGTSGMLSVVKDLGFGENFTGQTPIVSGEIGEDFTYYLATSEQINSSVG
                     VGVLVNPDDTIEAAGGFMLQLLPGATDEIIDEIEKNLTALPTVSRMIEAGETPESILA
                     KLAGGEDKLQILEKIPVSFECNCSKERFGSAIISLGKEEIRSMIEEDHGAEAECHFCR
                     NTYDFSEEELEKLYEEAK"
     gene            23311..24237
                     /gene="cysK"
                     /locus_tag="U0290_000951"
     CDS             23311..24237
                     /gene="cysK"
                     /locus_tag="U0290_000951"
                     /EC_number="2.5.1.47"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine synthase A"
                     /protein_id="HEM2300997.1"
                     /translation="MTIANSITDLIGKTPIVKLNRLPEAGSADVYVKLEFQNPGGSVK
                     DRIANAMIESAEKSGALKPGDTIIEPTSGNTGIGLAMVAAAKGYQAIFVMPETMSLER
                     RKLLQAYGAKLVLTPGPDGMKGAIAKAEELAKENNYFVPQQFHNPANPAVHEETTGPE
                     IVEAFGKDGLDAFIAGVGTGGTVTGVGHVLKKNYPDVKIYALEPEESPVLSGGSPSPH
                     KIQGIGAGFVPDTLDTKVYDGILKVSSEDALETAREVAKKEGILVGISSGATVKAALD
                     LAKELGAGKKVLAIVASNGERYLSTPLYNFED"
BASE COUNT         8245 a         4362 c         5122 g         6607 t
ORIGIN      
        1 ctagaagaat taacaaatgt aaaagaatgt ctgattgttt ttccatataa tataagcata
       61 tcccatagtt taagccacct atagtttcta ctgcaaaacg tataatttag ttcccacata
      121 tgctaaaaaa cgtgtcctta actctctctg tcagattagt tgtaggtggc ttaaacttac
      181 ttttacgaat tgaaaaggag cggtgaaatg aagagtaaac ttatttgtat catcatggta
      241 atagcttttc aggctcattt caatatggcg gtaaaagcgg attctgtcgg ggaagaaagg
      301 ctccgaaata atatacaagc caaaaggaac cctgctgatt taaaagcttt gccagattcc
      361 tgcgaagcaa aagattttta taaaaatttt aaaattcttg atatgacaaa agataagcta
      421 ggcgttacgc attatacgct cgcgctaagt tctgatggtt acttgactga taatgatgaa
      481 ataaaggtcc acgtcacacc ggataataaa atcgctttta taaatggaga tttacagcaa
      541 gggcagctta ggattactaa tcaaataaaa attacagaaa aaaatgctat tgaaaaagca
      601 tttgaagcca ttggtcagag tgaagctcat gtgaaaagtt atattggaaa tccagtgaaa
      661 gaaaaagaaa tcatcatcaa ttccagaacg aaacgcttag tttataatat aaaattgatt
      721 tttgctgagc cggaagttgc gagttggatt attcaagtgg atgcagaaac cggcgcaatt
      781 ttaaaaaaac aaaatatgct ttccgaggta gagcgggctg atacccacaa agattttcaa
      841 gcgcttggta aaggagctaa ccgattactc cagagaccat tacatgtcat gaaaataaat
      901 gacctgtttt acttagtgga tagaactcat aaaggactca taagaacttt tgatttaaac
      961 cataaaacgg acgcatcttt tggaaaagtg gtgtcgaata aaacgaatat gtttacggat
     1021 ccggaattta gttccgcggt ggatgctcat ttttacgcaa gtgaagtgta cgattactat
     1081 aaaaatgtcc atcaactaga gagtctagat ggtaaaggtg gagaaattga ttcgtttgtt
     1141 cattatggct tgaattgcaa taatgctttt tgggatggcc gagaaattct ttatggagat
     1201 ggggacaaaa agaatttcaa accattttca tgcgccaaaa cgattgttgg tcatgaacta
     1261 acgcatgcgg ttatccagta ttcggcagga ttagaatacg aagggcaatc aggtgcgcta
     1321 aacgaatcgt tcgccgatgt ctttggttat tttattgcgc caaatcattg gttgattggt
     1381 gaggatgtct gtgtgcgtgg gttacgagat gggcgaataa gaagcatcaa agatcctgac
     1441 aaatataatc aagcggctca tatgaaggat tatgaatcgc ttccaatcac agaggaaggc
     1501 gactggggcg gagttcattt taatagtggt ataccgaata aagcagccta caatacgatc
     1561 actaaacttg gaaaagaaaa aacagaacag ctttacttcc gcgccttaaa gtactattta
     1621 acaaaaaaag cccagtttac cgatgcgaaa aaagcactcc aacaagcggc gaaagattta
     1681 tatggtgaag atgcttctaa aaaagttgcg gaagcttggg aagcggtcgg agttaactga
     1741 ttaacaaatg ttagagaaaa cttaattctt caagtgatat tcttaaaata attcatgaat
     1801 atttttttct taaattagct aattaagaag ataaccaact gctaatccaa tttttaacgg
     1861 aataaattag tgaaaatgaa ggccagattt tccttgttct aaaaaggttg tattagcgta
     1921 tcacgaggag ggagtataag tgggattaaa tagatttatg cgtgcgatga tggtagtttt
     1981 cattaccgcc aactgcatta cgattaaccc cgacataata tttgcagcga cagatagcga
     2041 agattccagt ctgaacacag atgaatggga agaagaaaaa acagaagagc agccaagcga
     2101 ggtaaatacg ggaccaagat acgaaactgc acgtgaagta agttcacgtg atattgagga
     2161 actagaaaaa tcgaataaag tgaaaaatac gaacaaagca gacctaatag caatgttgaa
     2221 agcaaaagca gaaaaaggtc caaatattaa taataacaac agtgaacaaa gcgagaatgt
     2281 ggctataaat gaagaagctt caggatccga ccgaccagct atacaagtgg agcgtcgtca
     2341 tccagggttg ccatcggata gcgccgcgga aattaaaaaa agaaggaaag ctatagcatc
     2401 atcggatagt gagcttgaaa gccttactta tccggataaa ccaacaaaag caactaagaa
     2461 aaaagtggcg aaagcgtcag ttacggatac ttctgaaagt gacttagatt ctagcatgca
     2521 gtcagcggat gagtctacac cacaaccttt aaaagcaaat caacaaccat ttttccctaa
     2581 agtatttaaa aaaataaaag atgcgggtaa atgggtacgt gataaaatcg acgaaaatcc
     2641 cgaagtgaag aaagcaattg ttgataaaag tgcagggtta attgaccaat tattaactaa
     2701 gaagaaaaat gaagaggtaa atgcttcgga ctttccacca ccgcctacgg atgaagagtt
     2761 aagacttgct ttgccagaga caccgatgct tcttggtttt aatgctcctg ctacatcaga
     2821 accgagctca ttcgaatttc caccaccacc tacggatgaa gagttaagac ttgctttgcc
     2881 agagacgcca atgcttcttg gttttaatgc tcctgctaca tcggaaccga gctcattcga
     2941 atttccaccg cctccaacag aagatgaact agaaattatg cgggaaacag caccttcgct
     3001 agattctagt tttacaagcg gggatttagc tagtttgaga agtgctatta atcgccatag
     3061 ccaaaatttc tctgattttc caccaatgcc aacagaagaa gagttgaacg ggagaggtgg
     3121 tataccaaca tctgaagaat ttagttcgct gaatagtggc gattttacag atgacgaaaa
     3181 cagcgagaca acagaagaag aaattgatcg cctaactgat ttaagagata gaggaacagg
     3241 aaaacactca agaaatgcgg gttttttacc attaaatccg tttactagca gcccggttcc
     3301 ttcgttaact ccaaaggtat cgaaaataag cgcgccggct ctgataactg acgtaactaa
     3361 aaaagcacca tttaaaaatc cgccacagcc attaaatgtg tttaacaaaa aaactacaac
     3421 gaaaacagca ccaaaaaaaa taacccctgt gaataccgcg ccaaagctag cagcacttcc
     3481 tatcacgaaa gcgcaagaaa ctgagcttgg ggaaaataaa gcaccattta tagaaaaaca
     3541 agcagagaca aacaatcggc caattgatat gccgagccta ccagtaatcc aaaaagaagt
     3601 tacagaaaga aataaagagg aaatgaaacc gcaaaccgag gaaaaagtgg taggagaaag
     3661 cgaaccagct aataatgtga acggaaaaaa acgttctgct ggcattgaag aaggaaaatt
     3721 aattgctaaa agtgcagaag acgaaaaagc aaaagaagaa ccagtgaacc atacgacgtt
     3781 aattcttgcc atgttagcta ttggcgtgtt ctctttagga gcggttatca aaatcattca
     3841 attaagaaaa aatagttgaa gacgcagaat gaaagaaaaa gtgaggtgag tgatgtgaag
     3901 ttcaaaaaag tggttctagg tatgtgcttg accgcaagtg ttctagtctt tcctgtaacg
     3961 ataaaagcaa gtgcctgttg tgatgaatat ctaaagcccc ccgcagctcc gcatgatatt
     4021 gacagcaaat taccgcataa acttagttgg tccgcggata atccgacaaa tactgacgta
     4081 aatacgcact attggctttt taaacaagca gaaaaaatac tagctaaaga tgtagatcat
     4141 atgcgagcta atttaatgaa tgaacttaaa aatttcgaca aacaaattgc tcaaggaata
     4201 tatgacgcgg atcataaaaa tccatattat gatactagta cgtttttatc tcatttttat
     4261 aatcctgata aagataatac ttatttgcca ggttttgcta atgcgaaaat aacaggagcc
     4321 aagtatttta atcaatcggt ggctgattac cgagaaggga aatttgacac agcattttat
     4381 aaattgggcc tagcaatcca ttattatacg gatattagtc aacctatgca cgccaataat
     4441 tttaccgcaa tatcctatcc accaggctac cactgtgcat atgaaaatta cgtagatacc
     4501 attaaacaca attatcaagc aacagaagac atggtagtga aaagattttg ctcaaatgac
     4561 gtgaaagaat ggctctatga aaatgcgaaa agggcgaaag cggactatcc gaaaatagtc
     4621 aatgcgaaaa ctaaaaaatc atacttagta ggaaattccg aatggaaaaa ggatacagtg
     4681 gaacctactg gagctagact aagagattca cagcaaactt tggcaggctt tttagaattt
     4741 tggtctaaaa aaacaaatga ataacaatat ttaggaatat attcttatcc actcgttagc
     4801 gggtggatat attttatggg gaggaagtaa gccgaatgta tataaaaggg aggttaatct
     4861 ttttctttgt aatgtttgta atcgcgttat gttccgtatt aatattgctg ataataaaaa
     4921 tgagcgtatg gaaagaggaa ccatttaatt taagtgatgc aaaggagatt gagtgtcttg
     4981 gaagttgcaa aataaaaaat actaatcaaa aaatccattt cttctccata aaaaagaatt
     5041 tgtttgagga aaagggcaat atggctggaa ttttgaatga acacgagcga aaaggagctg
     5101 ataagtccat tttcattgta attttagatg atgaaaaagg gattgcaaac gaagagtaaa
     5161 gttatgatta gttgtgactt tttcgtgtca atcaaaaaag tgttgtgagc aaatgttcac
     5221 aaaatatcta ttgtaatagt gcagtttgtt aggtaccctt gaatagaaaa aacaatgtag
     5281 gaggaacatc tatgaaaatg cttaaaaagg gtacaacggt tttatttgta atgattatgg
     5341 cggttatgtt agtcgcgtgt ggggacaaag aagaaacgaa aacttactca ctttcccaaa
     5401 atggtgttga ttctaaatta acatacacat ataagggaga caaagttact aaacaaacag
     5461 ctgagaacac aatgtcatat gcttcgctag gtgttgcttc aaaagaagac gctgaaaaaa
     5521 tgcttaaagc aacaagcgat aaattccaag gtattgatgg tttaaaagaa aagattgaat
     5581 ataaagatga taaagctatt gaaacactag aagtagatta cactaaaatc tcttcggaag
     5641 atatgaacaa aatccctggt atgtcttcaa acggtgatac ttctaaaggg attagcatgg
     5701 aggaatctgc aaaaatgcta gaatcccaag gctataaaga agtttcaaaa taaatttgca
     5761 ataaaacaag aagtatccga ttcatttgga tacttcttgt tttattcaat aatcttgcgc
     5821 ttcgatgaca acagctgtac cagatgcagt gaccataagc attccgttat cagctccaag
     5881 cacttcataa tcaatgtcaa caccgataac ggcatttgcg ccaatatctt tcgcacgttg
     5941 ttccatttcg cgaattgctt cctcgcgagc attaataagt tcatcttcat agccttgcga
     6001 acggcccccg aagaaatttc gaagtccagc tccaatatct ttcatgaagt taacgccggt
     6061 gatgacttcg ccgaaaacga tttttttata ttcgataatt tgtttacctt caatatttgg
     6121 tgaggttgtt acaatcatga gttatccctc cagtttttct tttatcatac ctcttactac
     6181 tttttctagt caaaggatat ccggttattt cgtacgattt ctcgcttttt ctatataaga
     6241 aatagcatcc ggaactttac acgctgtatt tccaaggttt acatgaactt tcccgactga
     6301 tttcgcagct tccattgctt tttcgtgcaa atcgtctttg taaattccac aagtgataat
     6361 aaaaccgttc attgaatagc gggttctatt ggtttctgtt tgcagcgttt ctttcgcgcg
     6421 ttgaagtaat gcctctgctt caggcaaatt gttaatatgt tcgctataaa tctgccagcc
     6481 catggattta gttaaatcat aatcactttc aatccacgtt ttggcgaaaa ggagtgcatc
     6541 atcacgtttg cttacaatcg atgctagtcc aaaagttagt tgtgaccatg tttcgcgaaa
     6601 aatgatattc catttttcga tttgttccgt ggttattttg tcgggattaa tcgctagcaa
     6661 accgagataa atcaagtcac tattatttga ttcaatcagc tctacggcga gttcgtgatt
     6721 ttttgtcagt ttttctcggc gaataatttt ctttaaatca ccaattttta gtccgtaaag
     6781 atctaatgaa tccggacagc cgtgattacg aaaaatttta atcgtattgg ggttttctaa
     6841 ggcttgtagc tcggtattaa gttggtcaaa agtaatcgta cgcgtcactc ctctcgaata
     6901 aattaagtat aacaaaaaaa gcatgcgaag gcgcatgctt ttaggatttg agaatattag
     6961 tcgatttgtt tcattgcgtc gtctagaact tttttaagtg tatctgcaga gtttttcatt
     7021 tgttcttttt ctttgtcgtt taaattcatt tcaacaatat ggcgaacgcc ttgacggtta
     7081 acgactgcgg gagcgccgat ataaatgtcg ttcataccat aatgaccatc tagataaaca
     7141 gaaagtggta agatcgcatt ttcgttattt agaattgcct ttgtaatacg agctagagct
     7201 gcagcaacac cgtagaatgt agcgcctttt ttattaataa tttcataagc tgcatcacga
     7261 acacttacga aaatagtatc cattgcacct tgttcatctt cgctaatcca ttcagtgatt
     7321 ggaagaccgc cgacagttgt gtggctccat gctgggaatt ctgtatcgcc gtgttcgcca
     7381 aggatgtaac catggacgtt acgagcatct acttttagat agtcggcaat tgacatacgg
     7441 aaacgtgctg tatcaaggct tgttccagaa ccgataacac gttcttttgg aagacctgag
     7501 aatttccatg tagcgtaagt taagatatct actgggttag aagcgattaa gaagataccg
     7561 tcaaatccgc tagccattac ttcatccacg atgcctttca tgattttaat attacgattt
     7621 actaaatcta aacgagtttc accaggtttt tgtgcagtcc cggcagttac aacaactaag
     7681 tccgcatcgt ggcagtcgct ataatttgct gagtagattt tcttcggtgt agaaaatgga
     7741 acggcatgac ttaaatccat tgcatcccca atagttctgt ctttatctat gtcaatgata
     7801 ccaaattctt gtccaatgct taagtttaca caagcaaatg cgtaactaga accaactgct
     7861 ccgtcgccaa ctaaaataat tttttgatga tctttcattt cgaattcctc ctataaaaaa
     7921 tctatttact agtacagtat aacatgaatt tttcatttgt gaagcgttga acgtcctgaa
     7981 tttaaaaaag ttgttataat aaatttgtga aaacgctata gtacagtttg gaagcgtcca
     8041 cattagcgaa tagccgctat tttctgttta ccttttattg agaattataa accttacaaa
     8101 tcaaaattag gctatttctt tgttttgcta tttttctaaa gggtagatat aatgtagatg
     8161 taccaaaatt gaatgagtgg agtgattttt tatggcaaca acattagagg tccagaaaag
     8221 agaaacaacg caacattcag aagtaacgag attgcgtagt gaaggaaaag tacctggaat
     8281 tatttatggc tacaaatcgg aaaatgttcc agtttccgtt gattctttgg aattaatcaa
     8341 agcagttcgt gacaatggtc gtaacgccgt attttcagtt actgtggacg gcaagaaatt
     8401 aaacgtttta ttacatgaat atcaagtaga tccgttaaaa gacgtattag tacacgttga
     8461 tttactagcg gttgatatga atgaagaagt tgagacagat gttcgtgtgg tattagttgg
     8521 ggatgcaccg ggagttaaag ctggcggcgt actacaacaa attatccatg atgtaaaagt
     8581 ttcagcaaca ccagaaaaat taccagaaac aattgaatta gacatttctt cattagaaat
     8641 cggtgatgtt ttaacaacga acgaccttcc ggaaaacaaa gactatgtcg tgcaagcgga
     8701 ggaagaagaa acagtagtaa ctgtatctgc tccacgtgcg gaagaagaac caacgactac
     8761 ggaagcacct gaaccagaag ctgtacatgg taaagatgaa gaacctgttg aataattttg
     8821 aataaataag gatggaagat tcgcttttgt ttgcgatatc ttccattttt tttgttataa
     8881 tggtttcgag aaggaggcgt ttatatgctt gataagtcag taccgcacat ttctgctatt
     8941 atggtcaatc acgatgctac aaattatccg gagtttcatt tacctgaggg atattctttt
     9001 tgcttttata aagatggttt ggaagaagac tggtgtagat tgcaattaga aacgggtcaa
     9061 gtgctttcaa tggacagtat tcgcgctcgt tttgaaacgg aattcggaaa tgaaaaagaa
     9121 aaattagcca agcgctgcgt ctttgtagag gcgccaaatg gtgaaattat tggaacggct
     9181 atgctttggg atggaaatac attcggcgag atggcgagtc ggattcactg ggttgcagtg
     9241 cttgattcgc acggtggaaa aggtatcgcg aaagccttgt tatccaaaat tctcggcttg
     9301 aataaaagta gttttgtcta tttaactacg caaaccggaa gttatcaagc tatctattta
     9361 tatcagaaat tcggttttga aaaatacgtc ggaaaaacgc cggaaaattg gaaaacagtc
     9421 aattttcaag aggaaaagga agcggcctgg caaattatcg aaaataaaat tgccgaacac
     9481 caagcctagt tggaaaactt tcaaccaagt gaaatccatg ttataatcaa aaaaacatcg
     9541 aaacaaaaac cagttcattc gtgaagtggt ttcgttcatg taaggagaag cttttatgaa
     9601 actaatcgca ggactcggaa acccgggcaa aaaatacgaa cgtacccggc ataatgtcgg
     9661 ttttatggta gttgacgaac taagttttcg tcatcaaacc ccttggaaga aatcaaaatt
     9721 taatggtatg actagcgaaa ttatcgtcgg cggtgaaaaa atgattttag tgaaaccact
     9781 cacttttatg aacgcttcag gtgaatgcat tcgtccgcta atggattact acaacatacc
     9841 aattgaagat gtcgtgattg tgtatgatga tctcgattta ccagttggga agattagatt
     9901 acgccaaaaa ggtagtgctg gcggacataa tggaatgaaa tcaattattc aacacgttaa
     9961 aacacaagag tttaatcgca ttcgtgttgg cgttagtcgt cctttaaaag gagaagttat
    10021 tcattatgtc ttgggagatt ttcctaaagc agaacaacct gatattatcg cagcgattca
    10081 aaaaagcgct gacgccatcg aagactttgc acagacacca tttatagaag ttatgaacaa
    10141 atacaatcaa aaatagacga tgacgaggcg tggcaatctt ttgccacgta tttcggtctt
    10201 tcttcggacg cgtgatttac tcttgcgttg catagaatga attttctgac aaaaaggagc
    10261 tgttttccct tgaaaggatt acaacaatta atatatgaac aaaaagatat tcgagcggtc
    10321 ttaaatgcgc tggatgaaaa agaaaaagca caacttgtca cagggctcac aggttcttca
    10381 cgtgcgttat ttgcaagcgt ggtagaaggt gcgtcaaagc gtccggttgt atttgttacg
    10441 cacaatttat accatgcgca aaaattatat gatgatttac tttctttaat ggatgtcgat
    10501 cgactatttt tatatccagc agatgaactg atttcttctg agttgagtat ctctagcccg
    10561 gaacttcgtg gtcaacgcgt ggaagcgctc gacttcttac tatccggaaa accggggata
    10621 gtcattgtgc cagttgctgg tctcagaaaa atgcttccac cagtatcgct ttggaaacat
    10681 ttcaacatat ccattgtaga gggcgaagaa attgatccag atgtactacg ccaaaaacta
    10741 gtgacaatgg gctacacaat gagcggaatg gtaaatacgc cgggagaatt cagtgttcgc
    10801 ggcgggatta ttgatattta tccaattaca gaagaatttc caattagaat agaacttttt
    10861 gacaccgaag tagattctct tcgtttcttt gatgtggaaa cgcagcgctc gacaacccgc
    10921 gtggaagaat tccgcctact gcctgcaact gaaatcattt tagatcaaag ctattatccg
    10981 gatatcgtca aacgcttaga aaagaaaatg acacatactt taaatgaatt gaaagaaaac
    11041 gaggataaac aagcgctagt tgaaaattta gaagaagatc ttgaaatgct tcgttctggc
    11101 gtgaaaccag acatgttctt taaatatatc ggtctggctt atcctgaccc agcctcgctt
    11161 tttgattatt ttccaaaaaa cacggcaatt ttgcttgatg aatttgggcg gattttagaa
    11221 acggaagaaa gcttggagcg ggaagaagcg gagtggcaaa cagaaacatt aagtcgaatg
    11281 gaaacggttc gcgacgtgca agtaagtcat tctttcaaaa agctattaga agcaaatcac
    11341 tcgccgaaaa tatacttatc ccttttccaa aaacaaatgg cgagcatgcg cgtctcgaaa
    11401 acaactaaca tcgtctataa acaaatgcag caatttcatg gccaaatgaa tgtgttgaaa
    11461 accgagctag aaagttggca taagaataat tatgccgttg ttattttagc cccaaacctt
    11521 gagcgcgccg aaaaaatgca acaaacttta actgactacg atatggaaag tgcgattttg
    11581 aaaaaagaat cggatgtgcc gaaatatgga atggttcagt ttgtcatcgg aacgttccag
    11641 aatggttttg aacttccatt agctaaagta gcgattataa gtgaaaccga actgttcaat
    11701 aaaaaaatca aaaaagtgaa gaagcgccaa aagctctcga atgcagaacg aatccaaagt
    11761 tactctgaat taaaagtagg tgactacgtg gttcatgtga accatggtat cgctcgttat
    11821 gttggcatgg aaacgctaga tatcaacggt gtgcataaag attacttgct acttgtttac
    11881 caaggagagg ataaactatt tatccccgtc gatcaacttg atttagttca aaaatatgtt
    11941 ggtgcagaag gtaaatcacc aagattaaac aaacttggtg gcgctgaatg gaagcgagtg
    12001 aagaagaaag tacaagcttc cgtccaagat atcgcagacg atttaatcaa actatacgcc
    12061 gaacgtgaag ctgaaaaagg ctatgcgttt agtgcggatg atgaaatgca gcgcgaattt
    12121 gaagaggctt tcccgtatca agaaaccgaa gatcaactgc gctcgatttc agaaatcaaa
    12181 aaagatatgg aacgaccgcg cccgatggac cgtctgttgg ttggagatgt tggttacgga
    12241 aagaccgaag tggccttacg agctgctttc aaagcaatta tggatggcaa gcaagtcgcc
    12301 ttcttagttc cgaccaccat tttagcgcaa caacattttg aaacaatgaa agaacggttc
    12361 caaggtttcc caatagaaat cggactttta agccgtttcc gaacaaagaa acaacaaaca
    12421 gaaacattaa agggtatgaa aaacggcaca gtcgacgttg ttgttggtac ccatcgttta
    12481 ttatcaaaag atgtggagta tcaagattta ggcttattaa ttgtcgatga agaacaacga
    12541 ttcggcgtaa ctcataaaga aaaaatcaaa caaatgcgtt ccaaaataga cgtactaaca
    12601 cttactgcaa caccaattcc aagaacttta cacatgtcca tgctcggcgt tcgtgacctc
    12661 tctgttatcg aaactccgcc agcgaaccgt tttccagtgc aaacatatgt ggcggagcag
    12721 aataacgttt tagttcgaga agcaattgaa cgtgaactag cgcgcgacgg acaagtttat
    12781 tatctatata atcgagtgga atccattacg caaaaagcag atgaaatttc tgcgatggtt
    12841 cctgatgcta gggttgccac tgcgcacgga cagatgggtg aatcggaatt agagtctgtt
    12901 attttaagtt tccttgaagg ggaattcgat gtacttgtaa cgacgaccat cattgaaacc
    12961 ggcgtagaca ttccaaacgt taatacactc tttgttcaag atgctgatcg gatgggtctt
    13021 tcacaacttt atcagttgcg cggacgagta gggcgttgga acagaatcgc ctacgcttac
    13081 ttcatgtatc aaaaagataa aatattgcgt gaggaagcgg agaaacgctt atcggctatt
    13141 aaagaattca ctgaattagg ttcaggtttc aaaatagcga tgcgtgactt atctattcgt
    13201 ggtgccggta atatcctcgg agcgcaacaa catggcttta tcgattcagt cgggtttgat
    13261 ctctactcgc aaatgcttaa ggaagcaatt gaggcgaaaa agccaaaaga agaacaaaaa
    13321 caaattgtcc ctgttgaaat tgatatccaa gcagacgcct atattccgga atattacatt
    13381 acagacggcc gccagaaaat cgagatgtac aaacgcttcc gcaatattga aacgttaagc
    13441 gaactcgaag atttacaaag cgatatgatt gaccgttttg gtgaatatcc agaagaagta
    13501 gaatatctat tcacaatgac agaactcaaa gtccatgcac tcgaagttag cattgagtcc
    13561 gtcaaacaag aacaaaataa aattaccatg ctattttcag aaagcggaac agcaggcatt
    13621 cgcggagata tcgtcatgca aatcattggc gaatttggcc gaatggtcgg tgtgggtatg
    13681 gaaggtacac aactaaaaat cacgataaac gtccaaaata aacctttaaa agaatggtta
    13741 taccaagtca aaagtttggc tgaaaaactt cgcggagcca tgaaagaaag agcatctgca
    13801 gaaaattgat aagttattaa gaaggaagga ggtggcggag tgccagaacg ttccatgaag
    13861 cgactaatga aaggagcggc ttggctaacc gcggcctctc ttatttctaa aatacttagc
    13921 gcagtttacc gagtaccctt tcaaaatatg gtgggggatg tagggtttta tattttccaa
    13981 caagtatatc cgatatacgg aattgcaatg accctcgcac tcggtggatt cccagttgtt
    14041 atttctaaaa tgttagcgga ggcagaaggc gatgtaagac gacaacaaat aattatgcgc
    14101 gcagtctcac ggatgctccg aattgtaagt attgtgattt tcgccttttt attcctattt
    14161 gccaacccga ttgctatcat gatgggagac ccggcattat ctgaattaat tcgggtcatc
    14221 agtttcgtgt ttttacttat gccacagctt gcgtttatgc gtggcttttt ccaaggagaa
    14281 ggtgacatga ttccgaccgc aatctcgcaa acagtggagc aaattattcg agtagctatt
    14341 attttgatag gtgccggcct tgcacttcat tttaattttg atttatatga tgcaggttca
    14401 atggcgatga gtggtgcctt tttcggtggg gtttccggga ttttcatttt gcgtcatttt
    14461 tataataaaa aggtaaggct cggggaaggg attcaaccag cagtatttac aaataaagaa
    14521 gaaaaagtag gtattggccg cacgttcttg cgacaaagtg ttgcaatttg tgtagttagc
    14581 tccatgctga ttttattcca attagttgat tctttccaag tatatcgttt aatgagtgac
    14641 tcagggattc cggatttcat cgctaagtcg ctaaaagggg tatacgaccg cggacagcca
    14701 atcttgcaat taggtttagt catctcaact ggacttgcgc tcgcgcttgt cccaatgatt
    14761 actgccgcaa gagttcaaga tcaacaaaaa gaactaaaac gctccgtctt attagcgatt
    14821 aagattacat taattttggc aggtgcagaa acaattggac tcatagttat tatgcgtccg
    14881 ttaaaccaaa tgcttttcca aacgccagac ggtacattcg ttttacaatt atttatgcca
    14941 gctgttttcc taagctcact aatcatcatg ttaagcagta ttttacaagg tttcgggaaa
    15001 attactgtac ctgcagttgg cgttggaatt ggacttattg taaaatgggt aacaggaggc
    15061 attcttattc cgagactggc aacagttggt gcatccgttt caacatgtgt tggcttactt
    15121 gtgattctac tcatttgtta cgtatcacta aaacaaacaa tccgcgtgcc tttcgttgaa
    15181 aaaacaatgt tgttccggct aattgccgct ttagcgttaa tggctgtatt cccgtgccta
    15241 tttgaatggt tagctccact caatacaaga ctcggtagtg cgttccaagc aattgttagt
    15301 gcgttagttg gcggcgggat tttccttgtt ttttcactaa gatataaatt actcggtcca
    15361 aaagattttg ttttccttcc gtttggctcc aaattactag cgcttagtaa gctggttgca
    15421 cggaaataat taatataaag taggtgaata aaatggctac aaccatgcga ttagataaat
    15481 atttaaaagt atctcgacta attaaaagac gtacagtagc aaaagaagtc gcagaaaaag
    15541 gtcgcattgc ggtaaatgga gtgacggcga aaccaggtac caatgtaaaa tctggagatg
    15601 aactagttat tcgctttggt cctaaaatcg ttacagcaaa aatcgaacgc ctagaagaaa
    15661 atgcgaaaaa agaacaagca actgaaatgt atacgattat taaagaagag cgcacagacg
    15721 aaagtagata aagaaaaatc gtttgaaatg gcactattta gccgatttca aacgattttt
    15781 tattggtcat aaaaatcggt aaacaatttt ttgtcaaaaa gtcaagaaaa atatcataaa
    15841 attagcggat tccaatagac aaatgccgga tttattgata tcattttaag caagaaacgt
    15901 ttttttctct accgaaaatc atagacaatt agcaaataag aacatgggag ggacgatgta
    15961 tgaaaaaagc caaatcaaaa gtggcgagaa tagaaaatcg ctacataaaa gatactgcaa
    16021 caatggaaaa aactcgtagt cgtcgccgca ttgccctgtt ccgtagactt gcttttatgg
    16081 ctattatctt tgctgtggtg ggtgggttat taaccatcac atacactaaa caagtgttga
    16141 cactcaaaga gaaaaaagaa aagcaagtgc aagtggataa gaaaatggtt gcaatgaagg
    16201 acgaacaaga ctcgctaaat gagcaaatca agaaacttca caatgatgat tacatagcta
    16261 aattagcaag aagtgaatat tacttgtcca aagacggaga aattattttt aatattcctg
    16321 aagagaattc gaaacaaaaa gagtaagtca gagccgagcc gtcattctcc atggtaaatc
    16381 aaagggaaaa tatagttgag tatttttgga gtttgtaagt ttgactgttt gacactcttt
    16441 ttattatagc tataattaag caatagagtg atattttaag gaggacgcat ttttttatgt
    16501 cgatcgaagt aggcaacaag ttacaaggga aagttactgg gattactaat tttggagcat
    16561 ttgtggagct ggaaggtggc aaaacaggtt tagtccatat tagtgaggta gcagataact
    16621 atgttaaaga cattaatgac atcttaactg taggggatga agttactgtt aaagtaatga
    16681 atattggtga tgatggtaag attggtctgt ccattcgtaa agcagtagat cgtccggacc
    16741 gcccagagaa aagttacgat cgtaagccga aatacagcaa aaaacctgct gggaactatg
    16801 tgaaaccagc cgagagcttt gaagatataa tgtctaaatt cttgaaagat agtgatgaaa
    16861 gactcactac tatcaaacgc caaacagaat ctaaacgtgg cggccgagga gcaaaacgcg
    16921 gctaatacgc taaaattaat tgtaaagtag atgcaccgta ttggatcatt aatacggtgc
    16981 actttttaat aaaaaatgtg agagccgaat ttcgaaggaa ggttttcttg aatggatgac
    17041 accgataaac gagtacataa gtatatcgag aaacatgatt taatccgatc cgatgataaa
    17101 ttgcttgtgg cagtttctgg cggtccggat tctttggcgt tactgcattt tttatggaat
    17161 tcaaatttag tcccaaaaga agcaatttcc gtcgcacata taaatcacca cttaagggaa
    17221 aatgcggcga atgaacaaaa cgtcgtcgaa gctttttgcg agagccaggg cattcctttt
    17281 tacatagaag aagtagacgt aaaaagtcga gctgagagtt tgcaaaaagg tatcgaggaa
    17341 acagcgcgca ttgtcaggta tgatttcttt gagaaagtaa tggctgagaa aaagatcaac
    17401 aaactagcgc tcgcacacca tgcagatgac caaatcgaga caatcttaat gcgactagtt
    17461 cgcggaagtg ctagtatcgg ctggtcaggc atccaaccaa aacgcgagtt aaaaggagga
    17521 caagcaatcc gtcctttttt accaattaca aaagcagaaa ttattgatta cgcccagaaa
    17581 cacgaattgg catacgaaat cgatgaatca aatactagtc aagaatacac aagaaatcgt
    17641 tacagagcgc aacttttacc gtttttaaag caagaaaatc cagctgtcta ttcgcacttc
    17701 gaaagatttt cagaagaaac aagcgaagac ttccaatttt tggaggcact tgcgagtgat
    17761 ttattgaaga aaaacctcat caaaaacggc aaacggacaa cacttttact tactaacttt
    17821 aaaaatgaag cgaatccttt acaacgccgc gcaattcatt tactattgag atatctgtac
    17881 aatgaagatg ccagttttat aacggtaaat cacatatatc agattatcca aatgattcaa
    17941 agcgacaatc catctagttc gattgactta ccaaataaac tcgttgcaaa cagagcatac
    18001 gataaacttc attttcaatt tggagaaaga gaagctcctt ccgagtttta tcatcaacta
    18061 gaactgaatg accgcattga attagataat aaagcaagta tccgtttaaa gttaaaaagt
    18121 tccgttgttc aaacaaatgg gctaaatgga atgctactgg atgctgaaga gataacactt
    18181 cctttgattg ttcgaaaccg tgtgaacggc gacaggatga cgatgaaagg gcaagcagga
    18241 agtaagaaac ttaaagatat tttcatcgat gccaaaatac caaggcaaga acgcgacaag
    18301 ctccctgtga taacagacta tactgggaaa atcctttggg ttcccggtgt gaagaagtct
    18361 gcatatgacc gagaatttag tcgtagcaaa aagcaataca ttattaggta cactcgaaat
    18421 ataggaggaa acgagagcat gcataatgat attcagaaag tgctgatatc ggaggacgaa
    18481 ttacaagaga aaattcgtga actaggtcgt gagttaacaa cagaatatga aggacgaaac
    18541 ccattagtag ttggggtgtt aaaaggagca actcctttta tgactgattt acttaaaaga
    18601 gtagacacat acttagaaat ggacttcatg gacgtatcca gttatggaaa tggtactgta
    18661 tcatcgggtg aagtgaaaat cattaaagac cttaatgcgt cagtagaagg tcgcgatgta
    18721 cttgtaattg aagatatcat tgatagcgga cgtacactta gttatctagt agacctaatc
    18781 aaataccgta aagcaaaatc agttaagttg gttactttac ttgataaacc agctggacga
    18841 aatgtagaaa ttgaagcgga ttatgtaggc tttgtcgtac caaatgaatt cgtcgttgga
    18901 tatggtttgg attatgcaga acgttaccgc aatttaccat atattggtat tttaaaacca
    18961 gaaatataca gcgagtgaaa ttaattaaca aacagaacaa tattttgtta aaatgtaata
    19021 gatagctttt cagaaaacga aaacaaaaaa ttgatgtcaa acatgcaaaa tagtgggcaa
    19081 tcgagattcg gtatgctatc attagtctta gttttcgaag gtgaaaatag tatcaataaa
    19141 tattaaaaaa tctatgttaa taatagaata acttcgtaag agaaaagcga aacggatgtg
    19201 ttttttaata atcaggggaa gaaaaaattg tttctaaatc tgctattagc caaaaacaac
    19261 ttttaaaggg gtaaaagtcc agaaaaagta agaatccaag ctcttgcgtg ggaggaggta
    19321 aggaatgaac aggtttttta gaaatgcgat attttatgtc ataatattcc ttgttattat
    19381 cgggattgtt gcttcattta actcaaacaa agaggcagcc aaagatatta gctattcaga
    19441 atttgtgagt aagttagaag atggtaaagt taaatccgta gaaatacagc cagaccgtag
    19501 tgtttataca atcaatgggg aatttaaatc tagcgataaa agttccgacg ataaaaaaac
    19561 tggtcttgga caaagcaaaa caagcagcac tgctttcaca acatacgctt taaacagcga
    19621 tacttcacta ggcgatttgc aaaaaacgct tgataaagaa gacgtgaaaa caacaatagt
    19681 acctgccaaa caaaacagcg gttgggttac attcctaact tctattgtac cttttgtaat
    19741 tatcttcatc ctcttcttct tcctaatgag ccagtctcaa ggtggcggcg gtggtaaagt
    19801 aatgagcttt ggtaaaagta aagccaaact ttacaacgac gacaagaaga aagttcgctt
    19861 cacagatgta gctggagcag acgaggaaaa acaagaactt gttgaagtag tagaattcct
    19921 aaaagatccg cgtaaatttg cggacctcgg cgctcgtatt ccaaaaggtg tccttttagt
    19981 aggtcctccg ggtactggta aaaccttgct agctcgtgcg gttgccggtg aagcaggcgt
    20041 gccattcttc tctatctcag gttcagactt tgtagaaatg tttgtcggtg tcggtgcaag
    20101 ccgtgtccgt gatttattcg aaaatgcgaa gaaaaatgca ccatgtatca ttttcattga
    20161 tgaaattgat gcagtaggtc gtcaacgtgg agcaggaatg ggcggcggtc acgatgaacg
    20221 tgaacaaacc ctaaaccaat tactagttga aatggatggt ttcggtggca atgaaggtat
    20281 catcattatt gcagcaacta accgtgcaga cgtacttgac ccagcacttc ttcgtccagg
    20341 ccgttttgac cgccaaatca tggttgatcg tccagacgta aaaggccgtg aagcagtact
    20401 tcgcgttcat gctcgtaaca aaccacttgc taaaagtgtt gatttaaaag caatcgctca
    20461 acgtacaccg ggattctctg gtgccgattt agaaaactta ctgaatgaag cagcactcgt
    20521 tgccgcacgt tccgataaga aagaaataga tatgagtgac ctcgatgaag ctagtgaccg
    20581 cgtaattgcc ggaccagcta agaaaaatcg agttatctct gaaaaagaac gccgcacagt
    20641 cgcatatcat gaaggtggtc acgttatcgt cggaatggta cttgatgaag cggaagttgt
    20701 gcataaagtt accattgttc ctcgtggaca agctggtggt tatgccgtaa tgttaccaaa
    20761 agaagatcgc ttcctaatga cgaaagctga gttaatggac cgtatcactg gtttactcgg
    20821 tggacgcgta gccgaagaag ttacttttgg tgaagtaaca actggtgcaa gtaatgactt
    20881 tgaacgtgca accgaacttg ctcgccgcat ggtaactgaa tggggtatga gtgacaagat
    20941 tggaccactt caattcactt ctggtaacgg tcaagtattt atgggccgcg atttcggtag
    21001 cgacaaagga tattccgata aaatcgccta cgaaattgat acagaagttc agagcttaat
    21061 ccgctactgt tatgaccgcg ctaaaacaat cattacagaa caccaagaac aacacaaact
    21121 tatcgcggaa acattactaa aagtagaaac tttagatgct cgccaaattc gttccctatt
    21181 tgatgacggt gtaatgcctc cagatatcga tacgattgac gtagaagcag aatatccttc
    21241 cgaaaaagac gaagaagtag caggtaaatc ttttgaagaa gaaaaagaag agttaaaaga
    21301 agaagaaaaa atcgaagaac caaaagaaga accaaaagaa gtaacttcgg aagatgctcc
    21361 aaacattgag caaacaccaa acgataaaaa agacgaataa aatcaaagag gctgggcttt
    21421 cccagtctct tttttgaagc tatattattc ggattttcct ataaaacatg ttatgatacg
    21481 ttagaaaaat cttctaaagg acggtattta aacttatgat acttgtaata gacgttggaa
    21541 atactaactg tactgtcgga gtttatgaaa aacaaaaact tctgaaacat tggcgcatga
    21601 caacagatcg tcaccgcaca tccgatgaat taggaatgac agtcttgaac tttttttctt
    21661 atgcgaattt aactccttct gatattcaag gaattattat ttcgtccgtc gttccaccga
    21721 ttatgcacgc aatggaaaca atgtgcgtac gctattttaa tatccgacca ttaatcgttg
    21781 gtccaggaat aaaaaccggc ttaaacctca aagtcgataa tcctcgcgaa atcggatctg
    21841 accgaatcgt aaacgccgta gcagcatcag aagaatacgg gacaccggtt atcgtagtcg
    21901 attttggcac tgcgaccaca ttttgctata tcgatgaatc aggggtatac caaggtggcg
    21961 ccatcgctcc agggattatg atttcgaccg aagctctata caaccgcgct gctaaactac
    22021 cacgcgtaga tattgctgaa tcaaaccaaa tcatcggcaa atccaccgtg gcatccatgc
    22081 aagcgggcat cttttatggt ttcgtcggcc aatgcgaagg gattatcgca gaaatcaaaa
    22141 aacaatccaa cgcaagccca gtagtagttg caacaggcgg gctcgctcgg atgataacag
    22201 aaaaatcttc tgcagtagat attttagatc catttttaac attaaaaggt ctagaacttc
    22261 tatatagaag aaacaaacca actacagaaa aataaaagga gttttatata atgagtgatt
    22321 atttagttaa agcgttagcc tacgatggca tggcgcgtgt atatgcagca gtaacaaccg
    22381 aaacaatcaa agaagcacaa agaagacatg atacatggtc cgtctcatcc gccgcacttg
    22441 gtagaacgat gacaggaaca cttttccttg gagcaatgca aaaagaagac caaaaaataa
    22501 ctgtaaaaat cgaaggcgac ggcccaatcg gtccaatcgt agctgatagt aacgcgcaag
    22561 gtcaaatcag aggatacgta acaaatccac acgttcactt cagcgaacta aatgaagctg
    22621 gaaaacttga cgtccgccgc ggcgttggaa catccggaat gctttcagtt gtaaaagatt
    22681 taggctttgg agaaaatttc accggacaaa cgccaattgt ttcaggtgaa attggtgaag
    22741 attttacgta ttacctagca acatctgaac aaatcaattc ctccgttggt gtaggagtac
    22801 ttgttaaccc agatgataca atcgaagcag ctggcggttt catgttgcaa ttactccctg
    22861 gtgcgacaga tgaaatcatt gatgaaatcg aaaaaaatct gacggctcta ccaacagttt
    22921 ctagaatgat tgaagcgggc gaaactcctg aatcgatttt agctaaactt gcaggcggcg
    22981 aagataaact acaaatctta gaaaaaatcc ccgtttcctt tgaatgtaac tgctccaaag
    23041 aacgctttgg cagtgcaata atttcacttg gaaaagaaga aattcgttcc atgatagaag
    23101 aggatcacgg cgcagaagca gaatgtcatt tttgtcgtaa cacttacgat ttttcagaag
    23161 aagaattaga aaaactatac gaagaagcta aataaagaaa aaggagcacc taattggttg
    23221 ctccttttta aaagaggtta aacttgacaa aacaggtcgg aattaattaa actagatgaa
    23281 agacctaaaa tagataggag tgctttaata atgacaattg caaattcaat cactgattta
    23341 attggaaaga cacctattgt gaaacttaat cgtttaccag aagcaggaag cgcggatgta
    23401 tacgtaaaat tagaattcca aaatccaggt ggcagcgtaa aagaccgtat tgctaacgcg
    23461 atgatcgaaa gcgctgaaaa atctggtgca ttaaaaccag gcgatacaat cattgagcca
    23521 actagtggga atactggtat cggcctagca atggtagcag cagcaaaagg ctaccaagcg
    23581 attttcgtaa tgccagaaac aatgagctta gaacgtcgca aattacttca agcttacggt
    23641 gcaaaattag ttttaacacc aggtccagac ggcatgaaag gcgcaattgc taaagcggaa
    23701 gagcttgcaa aagaaaataa ctattttgtt ccacaacaat tccacaaccc agcaaatcca
    23761 gctgtccatg aagaaacaac tggaccagaa atcgttgaag ctttcggtaa agatggctta
    23821 gatgctttca tcgcgggagt tggaacaggt ggaacagtaa ctggtgtagg acacgtactt
    23881 aaaaagaact acccagatgt taaaatctat gctcttgaac cagaagaatc cccagtactt
    23941 agcggtggtt ctccatcacc tcataaaatc caaggtatcg gtgcaggctt cgttccggat
    24001 acattagata caaaagtgta tgacggcatt ctaaaagttt caagtgaaga tgctctagaa
    24061 acagcacgtg aagtagcgaa aaaagaaggt atcttagtag gtatttcttc cggagcaact
    24121 gttaaagcag ctctagacct tgcaaaagaa cttggtgctg gcaaaaaagt actagcaatc
    24181 gttgcaagta acggcgaacg ctacctaagc acacctcttt ataattttga agattaataa
    24241 tcagagagcc tagattttct aggttctttt tttatgaaaa gaaataaatg catttcttac
    24301 tattttctaa tcaaacgcac agcggaaact ttcttt
//
LOCUS       DASDYO010000027        24325 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.027, whole genome shotgun sequence.
ACCESSION   DASDYO010000027 DASDYO010000000
VERSION     DASDYO010000027.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 24325)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24325)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24325
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.027"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(63..662)
                     /locus_tag="U0290_000952"
     CDS             complement(63..662)
                     /locus_tag="U0290_000952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464422.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SpoIIE family protein phosphatase"
                     /protein_id="HEM2300998.1"
                     /translation="MNKAVESNNLFVFQRSKALQQYCGDVYYTHEDENGFLYVLSDGL
                     GSGLEANRAAKATVDAIKEDIHADITDMLEKANQAVSGLRGAAIAIIKGDYLTKTLYY
                     TGMGNIRFYMIGMEDKLIFPLSGSGFLSGRKQKYRLQSFKYKPGSKFLMHSDGLVLSR
                     VRKSLESPLCVVKIGHLIERNILDIPTDDVTFMVGKFPE"
     gene            complement(663..1442)
                     /gene="sigB"
                     /locus_tag="U0290_000953"
     CDS             complement(663..1442)
                     /gene="sigB"
                     /locus_tag="U0290_000953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464421.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase sigma factor SigB"
                     /protein_id="HEM2300999.1"
                     /translation="MPKVSQPDKEAKEKVYIWIAAYQENGDQDAQYNLVVHYKNLVES
                     IARKYSQGKSFHEDLVQVGNIGLLGAIRRYDATFGKSFEAFAVPTIVGEIKRFLRDKT
                     WSVHVPRRIKELGPKIKNAVEELTRELQSSPQISDIADFIGVTEEEVLEAMEMGKSYQ
                     ALSVDHSIEADSDGSTITLLDVVGGTDDGFERVNQRMLLEKVLPVLDEREQKILQFTF
                     IENRSQKETGELLDISQMHVSRIQRQAIKKLREALQNEEVE"
     gene            complement(1420..1893)
                     /gene="rsbW"
                     /locus_tag="U0290_000954"
     CDS             complement(1420..1893)
                     /gene="rsbW"
                     /locus_tag="U0290_000954"
                     /EC_number="2.7.11.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma B factor RsbW"
                     /protein_id="HEM2301000.1"
                     /translation="MATMHDKITLQLPAKPEYVSLGRLSLSGIASRAGFSYEAIEDLK
                     IAVSEAITNSVKHAFKGEDDGEITVEYLIYEDKLEVRVSDNGTSFDLETRKQEIGPYE
                     VGEDAEMMRIGGLGLFLIETLMDDVKLYYDEGVSVVMTKYINEKQVEENAKSIST"
     gene            complement(1877..2221)
                     /gene="rsbV"
                     /locus_tag="U0290_000955"
     CDS             complement(1877..2221)
                     /gene="rsbV"
                     /locus_tag="U0290_000955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464419.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti sigma b factor antagonist RsbV"
                     /protein_id="HEM2301001.1"
                     /translation="MNISIEIKERDTDHIDIFVAGEIDAYTAPKVKEALEVYQVKEGI
                     VLRIDLTEVSYMDSTGLGVFVGAFKSLRQRQSELVLFGLSDRLFRLFEITGLSDIIEI
                     KNVEGEMNGNNA"
     gene            complement(2371..3375)
                     /locus_tag="U0290_000956"
     CDS             complement(2371..3375)
                     /locus_tag="U0290_000956"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464418.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PP2C family protein-serine/threonine
                     phosphatase"
                     /protein_id="HEM2301002.1"
                     /translation="MEKAFEGKYRDILIQYLEHQDEEILYTCEKLSREAMEERVSPEE
                     IVHLHRSVLELYGKELPDFVRLSFDVLLEIMVGYGLAYMEHLSLRTEQKELRSEIAQA
                     EDMQKTLMKTEVPEHDELDFGVISVAARQMSGDYYSFTEEGDKQIGIALADVIGKGIP
                     AAFSISMIKYALAGMTGDDRKPSIVLESLNQVAEENINDNMFITMFYGLYHEDTHLFE
                     YGSAGHELGLYYQHKENSFSDLYAKGLPLGVDKNAVYRQFDKKIEVGDAIFIMSDGVT
                     ETRTANGFLEREELTEIIAAHISLSAEKMVHAIYDQLVKMQNFELHDDFTLICIKRTK
                     "
     gene            complement(3392..3802)
                     /locus_tag="U0290_000957"
     CDS             complement(3392..3802)
                     /locus_tag="U0290_000957"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464417.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anti-sigma regulatory factor"
                     /protein_id="HEM2301003.1"
                     /translation="MTFQSCVKIINEWDIVAARQLGRKISKEIGFGTVDQARITTAIS
                     ELARNIFLYAGRGEICIEKVNESGKQGMIIVAKDKGPGIVDIRKVMQDGYTTSGGLGA
                     GLPGVKRLMDSFDIESSIEGDSKGTVITTTKWVR"
     gene            complement(3805..4161)
                     /locus_tag="U0290_000958"
     CDS             complement(3805..4161)
                     /locus_tag="U0290_000958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014096810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEM2301004.1"
                     /translation="MGIPILKLGECLLISIQSELDDHTAVEFQEDLLAKIHETSARGV
                     VIDITSIDFIDSFIAKILGDVVSMSKLMGAKVVVTGIQPAVAITLIELGITFSGVLSA
                     MDLESGLEKLKQELGE"
     gene            complement(4167..5003)
                     /locus_tag="U0290_000959"
     CDS             complement(4167..5003)
                     /locus_tag="U0290_000959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464415.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEM2301005.1"
                     /translation="MYKDFANFIRTNKADLLNNWMNEMEKQSDQLINDIAKEAMYEET
                     SKEFVDLIVSNVTENGSKFNEKLDDFAEKVVHLGWPIHFVTTGLRVFGLLVYTAMRDE
                     DLFLKREEKPEDDAYYRFETWLSSMYNKVVTAYADTWEKTVSIQKSALQELSAPLLPI
                     FEKISVMPLIGTIDTERAKLIIENLLIGVVKNRSEVVLIDITGVPVVDTMVAHHIIQA
                     SEAVRLVGCQAMLVGIRPEIAQTIVNLGIELDQIITTNTMKKGMERALALTNREIVEK
                     EG"
     gene            complement(5254..5601)
                     /locus_tag="U0290_000960"
     CDS             complement(5254..5601)
                     /locus_tag="U0290_000960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464414.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type II toxin-antitoxin system PemK/MazF family
                     toxin"
                     /protein_id="HEM2301006.1"
                     /translation="MMVKRGDVYYADLSPVVGSEQGGIRPVLIIQNDIGNRFSPTVIV
                     AAITAKIQKAKLPTHVEATRKDGFERDSVILLEQIRTIDKQRLTDKITHLDEDLMAKV
                     NKALEVSLGVVEF"
     gene            complement(5605..5883)
                     /locus_tag="U0290_000961"
     CDS             complement(5605..5883)
                     /locus_tag="U0290_000961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CopG family ribbon-helix-helix protein"
                     /protein_id="HEM2301007.1"
                     /translation="MLEKEKRMIISVELTQEMIQELDVVVEKEKMGRSEVIMEATQQF
                     LQEKRARELRDEMERGYAEMATINFAIACECTHVEAEAEDRNISILGG"
     gene            complement(6089..7195)
                     /locus_tag="U0290_000962"
     CDS             complement(6089..7195)
                     /locus_tag="U0290_000962"
                     /EC_number="5.1.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine racemase"
                     /protein_id="HEM2301008.1"
                     /translation="MVTGWHRPTWIEIDRAAIRENIKNEQNKLPENVDLWAVVKANAY
                     GHGIIEVARTAKEAGAKGFCVAILDEALALREAGFQDDFILVLGATRKEDANLAAKNH
                     ISLTVFREDWLEELTLEAPLRIHLKVDSGMGRLGIRTTDEARRIETTIAKDNQLQLEG
                     IYTHFATADQLETSYFEQQLAKFQTILTSLKNRPTYVHTANSAASLLQPQIGFDAIRF
                     GISMYGLTPSTEIKTSLPFELKPALALYTEMVHVKELAPGDSVSYGATYTATEREWVA
                     TLPIGYADGLIRHYSGFHVLVDGELAPIIGRVCMDQTIIKLPREFQTGSKVTIIGTDH
                     GNTITADDAAHYLDTINYEVTCLLNERIPRKYIH"
     gene            complement(7214..7570)
                     /locus_tag="U0290_000963"
     CDS             complement(7214..7570)
                     /locus_tag="U0290_000963"
                     /EC_number="2.7.8.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464411.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holo-ACP synthase"
                     /protein_id="HEM2301009.1"
                     /translation="MIKGIGLDMIDLERVKQVVEKNPRFIERVLTEKEIKQFEKYEGN
                     RKIEFLAGRFAAKEAYAKANGTGFGKHLSFTDVEILQVEDGRPHVTLPVKSGENVFVS
                     ITHTARSAAAQVIIEI"
     gene            complement(7572..8951)
                     /locus_tag="U0290_000964"
     CDS             complement(7572..8951)
                     /locus_tag="U0290_000964"
                     /EC_number="1.3.3.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464410.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoporphyrinogen oxidase"
                     /protein_id="HEM2301010.1"
                     /translation="MKHIVIIGGGLSGLAAAYELQKTHPNYTWELVEKDKKLGGKFET
                     VKRDGFLIEKGPDSFLARKPAGVGLVKDLGLEDKLIANATGRSYIYHQKALHPIPEGS
                     VMGIPTDKEALLASTLVSEIGKARALQEPTMERNNQEQDQALGEFFEARFGKELVKTI
                     IEPLLSGIYAGDIYKMSLRATFPQFEQAVKKYGNLMDGLKESSMQTTGTKATIGAFRT
                     LEGGLDALPKAIAAALPKENLHTAKQATNITKKNSSYEISFVDGDKMEADGVIIAATH
                     DALIHLLAEKTTEPFAGQPLTTLATVSLAYNEQDVPILPDGTGYLVARTAPYKTTACT
                     WVQKKWPHMVPENKMLLRGFVGKAGETWLEQASDEAIVSAVLRDYAEMMDLHAAPLFY
                     EVSRMKSAMPQYLVNHQDRLKQLKKNIKADYPGVYFAGMSYEGVGIPDCIAGAQTAAK
                     ELVDYLEEV"
     gene            complement(9101..10576)
                     /locus_tag="U0290_000965"
     CDS             complement(9101..10576)
                     /locus_tag="U0290_000965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEM2301011.1"
                     /translation="MFEERRLHPIALIKEIITNVRRNIVPIVVGLFSVFRAINSNGYL
                     PDWAVYLIIVIVILLILTPAVLKYITYKYTLEDQGIRIKYGLIFRKNTYIPYERIQTV
                     QKKQWFFFIPFNVCQILIETAGGNGKAEADLVAVPVGVVDELNDLRDGKKRDIQEAVP
                     ETEETTVEVAEAPEKTVMLQTKQLILMAVTSGGVFGTLLIVLAFMQQFREVIPTDWME
                     AQAEELWKMGIIVLIVLIVLILLVLWGISIVTTLFKYFQFKLMKYPNSLVVEKGLLER
                     NHTTISLSRIQGITIIESPLRQMLGLVAVKVTTAGNSGDEKLSGDILLLPIMKKALAL
                     KTLKEMLPDYLFEIEKMERAPKASLRRFLQIYLIWTIIPAAVASILFFPLGLISIILP
                     VLAGIKGVTSYRATGVFTDKHTLLVQSRPIFSKLTHIIRKERIQGLSLRQSIWMEKGG
                     SRHLNVWLKSGSTSAEAYVRYINQDLAIKVYNWYSPSKTIN"
     gene            complement(10569..11051)
                     /locus_tag="U0290_000966"
     CDS             complement(10569..11051)
                     /locus_tag="U0290_000966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEM2301012.1"
                     /translation="MELDNLEKKLPEKIKTVWRQTEGIAVLTFLLCSVVAAIILYYAG
                     ASVWWSAIGFGLTVLYAAFIYLFIIPFRFARWSYQIKPDEMEIQHGIIFRSRVLIPMI
                     RIQHVETEQGPLLRRQKLVSLSITTAAKTHKIEAVNESESDELRHHILELVKVAKEDV
                     "
     gene            11184..11660
                     /locus_tag="U0290_000967"
     CDS             11184..11660
                     /locus_tag="U0290_000967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301013.1"
                     /translation="MKKKGYILLIIALLSLTLNWLPEIAHAQKEATGTTYTTATTNEL
                     MDMFLPHSIQNPYIETTKNSAELMFVTEEAATITTETNNQTQSIAGSTENHQFALANL
                     QPGNNLVTITATMTDGTSESKTITINLPEKPKKNSKSFHDHSKNQQVTHRKKGHLL"
     gene            complement(11706..13094)
                     /locus_tag="U0290_000968"
     CDS             complement(11706..13094)
                     /locus_tag="U0290_000968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464406.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM2301014.1"
                     /translation="MKKRWLVFAIICLIITGFLSPKAEAATDYGSSFFTNVSLQNQNG
                     EQTTNFKENSKVRVAYDFVITQPVASGETMTLTIPNQLKLINYGGFPLMDSQGNTIAN
                     ATIDQATGTITLTFTDYVNTHTDLSGSLYYNATFNSKNIQTDQVNPIAFPVKNSTQTI
                     NAFISKVNTGGGTGSPTIVFKQGRMDDKDLSILHWTVTLNNALTPIDNAVYTDTLGSG
                     QNLLGSATIKYRDANKKVITTNIQPITLDADRNFELSIGTLNNQSVVITYDTKITTKQ
                     KSYTNKATLSGDNLEAVSRNATVNDYGSGGQGTGTPPAPPVKEEPPFIPAEKQLIEKT
                     VETDFGPLEIVKDSEQNGKIKVIYKVKDGDTLPGVANKFDVSVAEIKDWNNLTSDTLQ
                     AGQKLQLTIEKTLLSKITIPPVQKVTSTTSVDGVVKATGVLPHTGDSNPFIPFVTGVS
                     LVALGFTFGRRN"
     gene            complement(13212..13979)
                     /locus_tag="U0290_000969"
     CDS             complement(13212..13979)
                     /locus_tag="U0290_000969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464405.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEM2301015.1"
                     /translation="MNIKEKIAVQLYSVRKEMERDLEGTLRKMHEIGFRYVQLDGMRG
                     NDPSEVRRLLQKYELKVIGMHIKHDRFMNDLDGIIEEAYFFDCKTVFDKYIEEEDQTT
                     AGYTATKAALINAAEKLHPLGFRIGLHNPEYDFNECIHGRRVMDYITDPVDGICIYAE
                     PDTYWIRAAGHDETEFIKRYSGRAPIVHMKDFVSGFELEDMDNNLVEIGQGEVDFRAI
                     IEWGEANGVEYYCIEQDRSKRAMFETLEASYQYLLQL"
     gene            complement(13997..14950)
                     /locus_tag="U0290_000970"
     CDS             complement(13997..14950)
                     /locus_tag="U0290_000970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2301016.1"
                     /translation="MEKIIVNGRKNGQKIEIACSNLVMGAGDFLRADNMDFAGPVLDQ
                     YFEMGGNIFDTARHYRHSEKAIGAWMNMRGNRDSVIIQTKGGHPVREASDVPRVTPEA
                     IHEDISVSLDTLQTDHVELFALHRDNPDVEVGPIMEAMHKEVEDGRVYAIGLSNWELP
                     RIIEANEYAVSHGLTPLSFNSPNFSLAKVNRPRWENCVSASEEMIRWHEATNLPLFSW
                     SSQAGGFFSGRFSEEDTRDTEMVEVYYSEANWERYSRAKQLANQKGCTPIQISLAYVL
                     TQSFPTAAVIGPENATELQSSVAAAGIKLTASEVDWLDLKA"
     gene            complement(14950..15678)
                     /locus_tag="U0290_000971"
     CDS             complement(14950..15678)
                     /locus_tag="U0290_000971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464403.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEM2301017.1"
                     /translation="MKLIINESEQLVAQTVSQRIIELVKEKPASLICIAGGDTPLLTI
                     EALIKANQTGEVDFSETQFVGLDEWVGLGRETKGSCIQTLYDAFFDRLKNVSSEQICF
                     FDGKATSLTDECARVDKFIDDRGGMDFILLGIGLNGHIGFNEPFVPVDVNCHVVELDD
                     VTKRVMSKYFDTDLPLTHGISLGMQQILAAKEIYLVATGEKKIDIVKQVVEKEPTVAI
                     PATLVKDSNTTLVVDKIAASGVEA"
     gene            complement(15699..17024)
                     /locus_tag="U0290_000972"
     CDS             complement(15699..17024)
                     /locus_tag="U0290_000972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2301018.1"
                     /translation="MSSKNKQSFMNRFIAFMEKYFEPVAARIEKQRHISSIKNGMIAL
                     ISVLIIGSFSLIISAIGNMFPAGSVVKEFFVQNAAALNLPFQFTFGLLSIYAAITISY
                     SHAKQMKVPVLHSVMAAVMVTLILNTKMVDGVLNTEFLDSRGLFIAIFAALISVELIG
                     LFIRKNITIRIKGLPAGIATTFEAIIPLVVLLFSAVGLSILMQSVTSGQIIPEAFTTM
                     LAPAINSIDTPYAVFLICFLEMLFWFIGLNGYAILIGFVLPFMTQYLGANAAAYAAGE
                     PIPHVFAPNFWDYFMGFSGSGITGALVILALFSKSRELKAVGKVLVVPAIFTISEPVV
                     FGLPICFNPYLFIPFVLGTPILAVGQWFVFHFGWVRPPIANVGGTPIPLAQYLATMDW
                     RAIILIIFVLAAAVCMYYPFFKMYEKSLIKEEEVVSERQAAHDALDLDF"
     gene            complement(17044..17379)
                     /locus_tag="U0290_000973"
     CDS             complement(17044..17379)
                     /locus_tag="U0290_000973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464401.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2301019.1"
                     /translation="MEINQLHVLLVCNLGASTGVMVTKMKEIAQNSEKLTNTDVKIEA
                     HPAGELREHIEDFDVILVGPQIKHQLKHLSEIAAEYNKPIQVIDTKDYGTVNGANILK
                     DAIILKLNK"
     gene            complement(17380..17709)
                     /locus_tag="U0290_000974"
     CDS             complement(17380..17709)
                     /locus_tag="U0290_000974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464400.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2301020.1"
                     /translation="MDIEKISFSLISLAGDSFSKLIEALQAAKESDSELVEQLLKEAD
                     DLMIEAHKVQTEMLIQETRGEQANFSVLLVHAQDTLMNTILASTLIREMIEMHQEIKT
                     LRKEEEK"
     gene            complement(17724..19742)
                     /locus_tag="U0290_000975"
     CDS             complement(17724..19742)
                     /locus_tag="U0290_000975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2301021.1"
                     /translation="MKLNQQCIQILDFLMEQEDFKNIGYISNALGCSERSVRYSLEKI
                     DIFLHEQTLPALIRHTRKGVLLPEKNIVNPVVRKFKQQITPKKYRYSQEEVQQFLLLK
                     LLLSEEVLPVTYFEEVLFISRSSVLNHLRAIEGELFLNNLDLSHQPRHGFLVTGNLIT
                     KTSLFARSFLRFINIREFYQFLDSENSLSKKGELFFYNLFELEILQEVNREAHSVEEN
                     MTRAMDEQLYLTLIAILLKQHEAKPDFQFTADFMIKDELDQALATIIGSLKQYQYGRE
                     DEAVIEAFVTGICEKMGEIYQVDFVHGDTDFFTQIKAHIKLMIRRVRAGVTIENPIFN
                     EFMRDNREIFMRVKESLDALKPLLPISVSSQEISFLAIYFASEVQRNKQTVEMKPNLL
                     IICPEGVAVSKMIAIQLKRMFEFESIQTIGLRKFKRAMMADFDFVISTVDLPDMQDAK
                     VLRIHSYLQKEDMELLQKHLRMKLIKSDKQIINKFSKILAIIGENTQITNLSKLEFDL
                     LEALISDEGETPKRLIPPFQFTEEAIVMEETCPTWRQAIKLGTKCLEHLEVIEPSYHE
                     KIIHNLKAYGPYMVVAPGVVIAHAGASDGVLMDGIGVTIIEDGIMFFDRYEEPVHVIF
                     TLALKTKEAHLIVEQLMKLALDEEKMQKIKMASSKRDIYHYVKSAIFE"
     gene            complement(19950..21116)
                     /locus_tag="U0290_000976"
     CDS             complement(19950..21116)
                     /locus_tag="U0290_000976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464398.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2301022.1"
                     /translation="MDMKKVNPNLTLLALAISAFGIGSTEFISVGLLPLISSSMGVSI
                     STAGLTVSIYALGVMVGAPVLTTMTAKMNRKNLLLLVMLVFLIGNLVSAFAVSFGMLL
                     TGRVVAAFAHGVFMSIASVIAADVVHPSKRASAIAVMFTGLTVATVTGVPLGTFIGQL
                     FGWRMSFLFIVAIGVIAIIANFFLVPKNLSNGKSISFKAIGQLLVNKKIVMVLLMTAF
                     GYGGTFVVYTYLSPMFSGMGYSTSMIVILLIVYGVMVAIGNTIGGHFANERPAKALFV
                     MFSLQGITLLLLQFTSTNAIFGLMTIMLMGFFAFMNVSGLQLYVVQLAERYLPETVSM
                     ASALNISAFNVGIAVGAFIGGLVTEYIGLGYTPIVGFLMVFIAIILTFYMKKDK"
     gene            21244..21597
                     /locus_tag="U0290_000977"
     CDS             21244..21597
                     /locus_tag="U0290_000977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464397.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2301023.1"
                     /translation="MTKVYNIGVEATLEVIGGKWKPVILCHLREGKKRTGELKRLIPN
                     ITQKMLTQQLRELEKSGVIVRKVYEQIPPKVEYSLSEYGESLSEILNKLCLWGENHVD
                     LLLTKNEDIILLKRD"
     gene            complement(21630..21941)
                     /locus_tag="U0290_000978"
     CDS             complement(21630..21941)
                     /locus_tag="U0290_000978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464396.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2316 family protein"
                     /protein_id="HEM2301024.1"
                     /translation="MTLSKEQIKATKSEFAENLALANLTIAEVAKELNTSEVKIERIL
                     NLKQRSLNDGWILRNYLLRKVAEVGKTPVPFTALSGDYHGYWFLDGEEIDSGILSIGN
                     H"
     gene            complement(21958..22956)
                     /locus_tag="U0290_000979"
     CDS             complement(21958..22956)
                     /locus_tag="U0290_000979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464395.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEM2301025.1"
                     /translation="MKIITIEEHFESEVITNEINKVTGNLVSGQVSPEMFQYMQKELP
                     SAAEMQDTEKRLAFMDQHGIDIQVLSYGNSSPQNLDPKISVALCKRANDELAKVIQQN
                     PTRFAGFAVLPVGSPEDAAIELKRAVEELGFKGALVKGQFENKYFDNRFYYPIFEMAE
                     KLDVPISFHPSFIPETITEQYFASDAWSDVVTGVFSSAGFGWHMDVGIQVVRMILSGI
                     FDKLPNLKIITGHLGEMVPMFLNRMDNTLGHWTTLERKISDYYRTNVYVTPSGLLYQN
                     EWKFLLNELDENHLIYALDYPFVKPENARTFLDTLDLTDEVKAKIAHENAEKLLHL"
     gene            23058..23615
                     /locus_tag="U0290_000980"
     CDS             23058..23615
                     /locus_tag="U0290_000980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464394.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2301026.1"
                     /translation="MNNYVKVHQPLNVDLRTQKTQTKLYTVLERFYVEGRTFESISIK
                     DLCEQARVSRATFYRHHEEIIQVIEVQILRTMQYFSLEFDQIILTKENIQRLILRTIQ
                     KNPLLFQAIFWSRAENIFVDVVSGEILRISLLKEVSFSDSHFIPNYFARMILSLATEI
                     QQSNKDYTNGQLVELIQEAARFLQK"
     gene            complement(23647..24135)
                     /locus_tag="U0290_000981"
     CDS             complement(23647..24135)
                     /locus_tag="U0290_000981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464393.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="QueT transporter family protein"
                     /protein_id="HEM2301027.1"
                     /translation="MKMKILTVNAIIAALYVVLGMIVAPIGFMALQFRIPEIFNHLIV
                     FNKKYFWGIIVGVFITNLFFSGLGWIDLVFGVAQSAISLLLMIGISKYVKGIIPRMII
                     NTILFSLTMAIIAWELVIVFDLPFLITWATTAASEFIVMGVGIPLMYLLNKRLNFRKM
                     ID"
     regulatory      complement(24141..24188)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00522"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="PreQ1 riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="preQ1"
                     /db_xref="RFAM:RF00522"
BASE COUNT         7096 a         5303 c         4023 g         7903 t
ORIGIN      
        1 gttctcatgt ccattaagaa aaaacacctt ttaaactagg aatcatttaa aaggtgtttt
       61 tgttattccg gaaatttccc aaccataaaa gtaacatcat ctgttggaat atctaatata
      121 ttacgctcga ttaaatgccc gattttcact acacaaagtg gcgattctag gctttttcta
      181 acgcgagaaa gaacaagtcc atctgaatgc attaaaaact tactgcctgg tttatattta
      241 aacgattgca accgatattt ctgttttcga ccggacaaaa atccagagcc agaaagcgga
      301 aaaataagct tatcttccat cccaatcata taaaaacgaa tattacccat accagtataa
      361 taaagggtct tcgttaagta gtcaccttta ataatagcta tcgcagcacc tcgaagtcct
      421 gaaacagcct ggttcgcttt ttcgagcata tcggtaatat ctgcatggat atcctctttt
      481 atggcatcaa cggtcgcttt ggcagctcta ttagcttcga gcccgcttcc aagtccatca
      541 gaaagaacat acagaaaacc attttcgtct tcatgggtat aataaacatc cccgcagtat
      601 tgttgtaatg ctttagaacg ttgaaataca aataaattat ttgattcaac tgccttgttc
      661 atttactcca cttcctcatt ctgcaacgcc tctcgaagtt ttttaatagc ttgacgttgg
      721 attctagaca catgcatttg tgatatatcg agtagttcac ccgtttcttt ttgactgcga
      781 ttttcaataa atgtaaattg caaaatcttc tgttctcgct catctaaaac agggagaact
      841 ttctctaaga gcatacgttg attcacacgt tcaaatccat catccgtacc accaacaaca
      901 tctaataagg taattgtact tccatccgaa tcagcttcaa tcgaatgatc tacagaaagc
      961 gcttggtagc tttttcccat ttccattgct tctaaaactt cttcctccgt gacaccgatg
     1021 aaatcagcaa tgtcgctaat ttgcggcgag ctttgtagtt ctctcgtcag ctcttctacg
     1081 gcatttttaa ttttcggacc taattctttg attcggcgcg gcacatgcac actccatgtt
     1141 ttatcacgta aaaatcgttt aatttcgcca acaatggttg gtacagcaaa tgcttcaaag
     1201 cttttcccaa acgtcgcatc atatcttcta atagctccaa gtaagccaat atttccaact
     1261 tgaactaaat cttcatgaaa agatttacct tgggaatatt tgcgagcaat agactctact
     1321 aggtttttgt aatgaacaac taaattatat tgggcgtctt gatcgccatt ttcttggtaa
     1381 gcggcaatcc atatatagac tttttctttc gcctctttat caggttgaga tacttttggc
     1441 attctcctcc acctgctttt cattaatata tttggtcatt acgacagaaa ccccttcatc
     1501 ataataaagt ttcacgtcat ccattaatgt ttcaattaaa aataaaccta gacctccgat
     1561 acgcatcatc tccgcatctt cccctacctc atatgggcca atttcttgtt tacgggtttc
     1621 taagtcgaag cttgttccat tatcagaaac acgaacttct aatttgtctt cataaataag
     1681 atattctact gtaatctcac catcatcttc tcctttaaat gcgtgcttta cagaattagt
     1741 gatggcttca cttacggcta ttttcaaatc ttcaattgct tcataagaaa atcctgcgcg
     1801 acttgcaatt cctgataatg aaagtctacc taaactaaca tattcaggct tggcaggaag
     1861 ttgtaatgta attttgtcat gcattgttgc cattcatttc accctctaca tttttgattt
     1921 caatgatatc tgacaatcct gtgatttcaa acaatcggaa aagtcggtcg cttaaaccaa
     1981 acaagacaag ttcactttgg cgttgacgta agcttttaaa cgctcctaca aatacgccta
     2041 atccggtact atccatataa cttacttctg ttaaatcgat tcgaagtact ataccctctt
     2101 ttacttgata tacttcaagt gcttctttta cctttggcgc tgtataagca tcgatctccc
     2161 cagcaacaaa tatgtctatg tggtcagtat cacgttcttt tatttctata ctaatattca
     2221 tcacttcacc ccatctaatt ttaagtatac tgtcgatttt accctaacta ataaaattaa
     2281 aacattcaaa aataaaaacg ctccactctt taaatacgtt tactcaccag taaatgctct
     2341 ctaaagaatg aggtacgtct tcacttcttc ttatttagtt cgcttaatac aaataagcgt
     2401 aaagtcatca tgcaactcaa agttttgcat tttaactaat tgatcataaa tcgcatgaac
     2461 cattttttca gcagataatg aaatatgcgc tgctataatt tctgttaact cttcacgttc
     2521 aagaaaacca ttggctgttc ttgtttctgt tacaccatct gacataataa atatagcgtc
     2581 ccccacttca attttcttat caaattgacg gtagacagca tttttatcta cacccagtgg
     2641 taaacctttg gcgtataaat cagaaaagct gttttcttta tgttggtaat ataagcccag
     2701 ttcatgtccg gctgaaccat attcaaacaa atgtgtatct tcgtgataaa gcccgtaaaa
     2761 catcgtgata aacatattgt cgttaatatt ttcttctgct acttggttta atgattcgag
     2821 tacgatagat ggttttctgt cgtccccagt cattccagct agtgcgtatt ttatcatgga
     2881 aatactaaat gcggctggaa ttcctttacc aataacatca gcaagcgcga taccaatttg
     2941 tttgtcacct tcttctgtaa agctatagta gtcaccgctc atttgtctag ctgcgacgct
     3001 aataactcca aaatcaagtt catcgtgttc cggtacctct gttttcatta acgttttttg
     3061 catatcttct gcttgagcga tttcactacg taattctttt tgctcggttc ttagactaag
     3121 atgctccata taagctaagc cgtagcctac cattatttct agtagtacat caaatgataa
     3181 tcgtacaaaa tccggcaact cttttccgta tagttcaaga accgagcgat gtaaatggac
     3241 aatttcttct ggtgatactc gctcttccat agcttctctg gataattttt cgcaagtata
     3301 aagaatttct tcatcttgat gttctaaata ctgaataaga atatcacggt attttccctc
     3361 aaaagctttt tccatttttt tctagctctc cttaccgaac ccatttcgtt gttgtaatta
     3421 ccgttccttt agaatcgcct tcaatactgg attcaatatc aaaactgtcc attaaacgtt
     3481 tgactcctgg aagccctgct ccaagtccgc ccgatgttgt ataaccatct tgcattactt
     3541 ttcttatgtc tacaatacct ggacctttgt ctttggcaac aataatcatc ccttgtttac
     3601 cagattcatt tactttttcg atacagattt ctcctcgtcc agcataaagg aaaatatttc
     3661 tagctaattc actgatggca gttgtaattc ttgcttggtc aacggttcca aagccaattt
     3721 ctttagatat ttttctacct agttgcctag cagctacaat gtcccattca ttaattatct
     3781 ttacacagga ttggaatgtc atgttcattc ccccaattcc tgtttaagtt tttccagacc
     3841 actttcaagg tccatcgccg aaagtactcc gctaaacgta attccgagtt caattagtgt
     3901 aatcgcaact gctggctgta tcccagttac aaccactttt gcacccatta gtttagacat
     3961 acttactaca tctccaagaa tttttgcaat aaatgaatca ataaaatcga tggaagttat
     4021 atcaatgact actcctctgg ccgacgtttc atggattttt gcaagcaaat cttcctggaa
     4081 ttctaccgca gtatgatcat ctaattcact ctggatagaa attaataaac attcacctaa
     4141 ctttaagatt ggtatcccca cagtattcac ccctcttttt ctactatctc tctgttcgtc
     4201 aaggctagcg cacgctccat gccttttttc attgtgttgg tcgtgataat ttgatctaat
     4261 tcaattccta agttaacgat tgtttgcgcg atttctggtc taatacctac aagcatcgcc
     4321 tgacagccga caagtctaac cgcttcggac gcttgaataa tatggtgcgc aaccattgta
     4381 tcaacaacag gaactcccgt aatatcaatc aaaaccactt ctgaccgatt ttttacaaca
     4441 cctattaata aattttctat gattaacttg gctctttccg tgtcaatcgt cccaattaac
     4501 ggcattacag aaattttttc aaatattggc aaaagtggtg ccgataattc ctgtagtgca
     4561 cttttttgga tagaaactgt cttttcccac gtatccgcgt aggctgtgac cactttgtta
     4621 tacatggagg aaagccatgt ttcaaagcga taataggcat catcttcagg tttttcttct
     4681 ctctttaaaa ataaatcttc atctctcatt gctgtatata ctaaaagccc aaaaacacgt
     4741 aggccagtgg taacaaaatg aatcggccaa cctaggtgga ccactttctc tgcaaaatca
     4801 tctagttttt cgttgaattt agagccgttt tcagttacat tcgaaacaat taaatccaca
     4861 aattctttgc tagtttcttc gtacattgct tcttttgcaa tgtcgttgat tagctgatct
     4921 gattgttttt ccatttcatt catccagttg tttagtaagt ctgctttatt tgtacggatg
     4981 aagtttgcaa aatctttata catcagttat tttccaacct ttctccacta ttaacaaaat
     5041 tttctctctt attgtgcggt ttgcttaact gccttttaaa aaagacatta gaaacaaatt
     5101 tagcgagtat gttgatacgc gttgtttgta ggtttctgat gtccttactg tttcttcaga
     5161 gcagttaatt atttcattat gtattaaact tattatttta cgtcagaccc ttttgtcctg
     5221 cattcatcat tgtatgttat tttttaggat ggattaaaat tctactactc ctagactgac
     5281 ttcaagtgcc ttgtttacct tggccattaa atcttcgtcc aaatgtgtaa ttttgtctgt
     5341 caggcgctgt ttgtcaatcg ttctaatttg ttctaaaaga atgacagaat ctctctcaaa
     5401 gccatcttta cgagtagctt ccacgtgtgt tggcaatttt gctttttgaa tttttgcagt
     5461 tattgctgcc acaatcacag ttggactgaa tctattacca atatcatttt gaatgatgag
     5521 aacaggccgt attccccctt gctcgcttcc gaccacgggg gaaaggtccg cgtagtatac
     5581 gtcaccacgc ttcaccatca gccattaacc tcctaaaata ctaatattcc tgtcttccgc
     5641 ttctgcttcg acatgggtac actcgcatgc gatagcgaaa ttaattgtcg ccatttctgc
     5701 atagccgcgc tccatctcgt ctcttaattc gcgagccctt ttctcttgta aaaactgttg
     5761 cgttgcttcc attataactt cactccgccc cattttttct ttttctacaa ctacgtcgag
     5821 ttcttgtatc atttcctgtg tcagttctac ggatattatc atccgctttt ctttctctaa
     5881 cacgtgtcac acccccaaag cctcgtacct gtaagtaaca actatatcgt accattatca
     5941 cgccttgaag aaaagagtta tttcgcattt tattgttaag aatattacag ttctagctga
     6001 tatactctct taagtcctat atatagctat aaagtttcat atgttagatt ataaacgctt
     6061 cttctaaaaa aagcacgaat attaccttct aatggatgta ttttctaggt atacgctcat
     6121 ttaacagaca agtaacctca taatttattg tatctaaata gtgagcggca tcatctgctg
     6181 ttatcgtgtt tccatggtcc gtgccaatta tcgttacttt tgaaccagtt tgaaattcgc
     6241 gcggtagttt tatgatggtt tgatccatac aaacgcgtcc tataattggg gctagttccc
     6301 cgtctactaa aacatgaaat ccgctgtaat gacgaatcaa cccatctgca tagccaatcg
     6361 gtaacgttgc aacccattct cgttctgttg cagtgtaggt tgctccgtag ctaacactat
     6421 cacctggtgc gagttctttc acatgaacca tttcggtata gagtgcaagg gctggtttaa
     6481 gctcaaatgg taagctagtt ttgatttcgg tggaaggggt taacccgtac atcgatatac
     6541 caaagcgaat cgcatcaaac ccgatttgtg gctgtaataa tgaagcagct gaattggctg
     6601 tatgaacata cgttgggcga ttttttaaac tcgttaaaat ggtttggaac ttagctaatt
     6661 gttgttcgaa ataactagtt tcaagttggt cggctgtcgc aaaatgcgtg tagatacctt
     6721 ctagttgtag ttgattgtct ttagcaattg tcgtttcgat tcgccttgct tcgtcggttg
     6781 tacgaatccc aagacgcccc ataccgctat ctacttttaa atgaatgcga agtggcgctt
     6841 ctaaggttag ttcctctagc cagtcctctc taaaaacagt gagggaaatg tggtttttgg
     6901 ccgctaaatt tgcatcttct tttctagttg cgccaagtac aagaataaag tcatcttgaa
     6961 acccagcttc tctaagagcc aacgcctcat ctaaaatggc aacacagaaa ccttttgctc
     7021 cagcttcttt cgctgttcta gcaacttcga taattccgtg accatatgca ttagctttga
     7081 ctactgccca taaatccaca ttttctggaa gtttattttg ttcatttttt atattttcgc
     7141 gaattgctgc gcggtctatc tcaatccatg taggacgatg ccagcctgtc accatgattg
     7201 ttcactttcc tttctaaatt tcaattatca cttgagctgc ggctgatcta gctgtgtggg
     7261 taatgctcac aaaaacgttt tcacctgatt tgactggtaa agtaacatgg ggtcgcccat
     7321 cttctacttg caaaatttct acatccgtaa aacttaaatg tttgccaaaa ccagttccat
     7381 tcgccttagc atatgcttct tttgctgcaa aacgcccagc taaaaattcg attttgcgat
     7441 taccttcgta tttttcaaat tgcttaattt ctttttctgt taaaacacgt tcgataaagc
     7501 gtggattctt ttccacgact tgttttacac gttctaaatc aatcatatct agtccgattc
     7561 ctttaatcat gttacacctc ttccaagtaa tctactaatt ccttagcggc tgtttgagct
     7621 cctgcgatgc aatcaggaat acccacacct tcgtagctca ttcctgcaaa ataaacccct
     7681 gggtaatctg ctttgatgtt ctttttcaat tgttttagtc ggtcctggtg attaactaag
     7741 tattgaggca ttgcggattt cattcggctt acttcataaa aaagtggcgc ggcgtgaagg
     7801 tccatcattt ccgcataatc tctcaaaaca gctgaaacga ttgcttcatc acttgcttgc
     7861 tctaaccaag tttctcccgc tttcccaaca aagcctcgta gtaacatttt attttctggt
     7921 accatatgcg gccatttttt ctgcacccat gtacaagcag tggttttata tggggcggtt
     7981 ctggcaacta gatagcctgt tccatctggt aaaatcggta catcttgttc attgtatgct
     8041 aatgagacag ttgcgagagt cgtaagcggt tgtcccgcga atggttctgt cgttttttct
     8101 gctaataaat gaattagcgc atcatgtgtg gcagcgataa tgacgccatc tgcctccatt
     8161 ttatcgccat ctacaaaaga aatttcgtaa gagctattct ttttcgtaat gttcgttgct
     8221 tgttttgctg tatgcaaatt ttcttttgga agtgcggcgg caatggcttt tggtaacgca
     8281 tctagcccgc cttctaatgt tcgaaaagca ccaatagtag cttttgtccc tgtcgtttgc
     8341 atgctacttt cttttaagcc atccatcaaa ttcccatatt ttttaactgc ttgttcgaat
     8401 tgtggaaaag tggcgcgtaa actcattttg tatatatctc cggcataaat tcctgataaa
     8461 agtggttcga taattgtttt gactaattct ttaccgaatc gcgcttcaaa gaattcgcca
     8521 agtgcttgat cttgttcttg attatttcgt tccattgttg gttcttgaag tgcgcgagct
     8581 ttcccaattt cggatacgag tgtactagct agcaatgctt ctttatctgt tggaattccc
     8641 atcactgagc cttctggaat cggatgaagt gctttttggt ggtaaatgta ggatcttcct
     8701 gtcgcgttcg caatcagttt atcttcgagt cctaaatcct tcactaagcc tacaccagct
     8761 ggttttcttg ctaaaaagga gtctggtcct ttttcaatta aaaatccgtc ccgtttaacc
     8821 gtttcaaatt tcccgcctag ttttttgtct ttttctacta attcccacgt ataattcgga
     8881 tgtgtttttt gtagttcata cgctgctgca agccctgata agccgcctcc gataatgact
     8941 atatgtttca ctacttaacc aatcctctct atctactctt tcgtttattc tatctatttt
     9001 accagatttc agggtaattg aacaaaaaat aaaagaacag ccatttccaa aattacagtc
     9061 gctattgatc agcgattttt aggaaatgac gtgttctttt ttaatttatt gttttggacg
     9121 ggctgtacca attgtatacc ttgatagcta agtcttgatt gatatagcga acataagctt
     9181 cagcgcttgt acttcctgat ttaagccaaa catttaagtg ccttgatccg cctttttcca
     9241 tccaaatgct ttgtcttaag cttaaacctt gaattcgctc tttgcggata atgtgcgtta
     9301 acttggagaa aattgggcgt gactggacaa ggagtgtgtg cttatctgtg aaaactccgg
     9361 ttgcgcggta gctggttacc ccttttatcc ctgctaaaac tggcaaaata atactaatta
     9421 agccgagtgg gaaaaataaa atacttgcta ctgcggctgg gataattgtc cagatcaagt
     9481 aaatctgcaa aaatctgcgc aaactggctt ttggagcacg ttccattttt tctatttcaa
     9541 ataaataatc tggtagcatt tcttttaatg tttttaaagc caacgctttt ttcataatag
     9601 gcaaaagtaa aatgtcgccg gatagttttt catcacctga gttccctgca gtagtaactt
     9661 tgaccgctac taagccgagc atttgtcgta gtggtgattc aataatggtg attccttgaa
     9721 tacgcgaaag tgaaatggtt gtatggtttc gttctaatag tcctttttct acaacaagtg
     9781 aattgggata tttcatcaat ttgaactgga aatacttgaa caatgtcgtc acaatcgata
     9841 ttccccataa taccaaaaga atcaagacaa ttaatacaat tagtacgata atgcccattt
     9901 tccataactc ttctgcttga gcttccatcc agtctgtcgg gatgacttct cggaattgtt
     9961 gcatgaatgc tagaacgata aggagcgtcc cgaaaacgcc gccggatgtt actgccatta
    10021 aaataagctg ttttgtttgt agcatgaccg ttttttctgg tgcttctgcc acttctactg
    10081 tggtttcctc ggtttctggc acggcttctt ggatgtctct ctttttaccg tcgcgtaaat
    10141 catttaattc gtctactacg ccaactggga cagcgactaa atcggcttct gctttcccgt
    10201 taccgccagc tgtttcgatt aaaatttggc agacattaaa tgggataaag aaaaaccatt
    10261 gtttcttttg gacggtttgg atgcgctcgt aaggtatgta tgtatttttt cgaaaaatca
    10321 aaccgtattt gatgcgaatc ccttggtctt cgagggtgta tttgtaggtt atgtatttta
    10381 agactgcggg ggttaaaatg agtaatataa cgatgacaat aattaaatat acagcccagt
    10441 ccggcaaata accgttacta ttaatggcgc ggaaaacgga aaataaaccg acgacgatag
    10501 gaacaatatt gcgtcttacg ttcgtaataa tttctttaat gagggcaatc ggatggaggc
    10561 gtctttcttc aaacatcttc tttcgccacc ttcacaagtt caagaatatg atgtctaagt
    10621 tcatctgatt cagactcgtt taccgcttca atcttatgtg tttttgcagc agttgtaatc
    10681 gataaagaaa cgagtttttg tcttctaagt agcggacctt gctccgtttc cacgtgttga
    10741 atgcgaatca tcggaattaa gacacgactt ctaaaaataa tgccgtgctg aatttccatt
    10801 tcgtctggtt taatctggta gctccaacgt gcaaaacgaa acggaataat gaataagtaa
    10861 ataaaggcag cataaagtac cgttaatcca aaaccgatcg cactccacca caccgaagct
    10921 cctgcataat acaaaatgat tgccgctaca accgaacaaa gtagaaaagt aagaacagca
    10981 attccctccg tttgccgcca aactgtttta attttctccg gtaatttctt ttctaaatta
    11041 tcaagttcca ttgctctact ccttttttct tttatcttac gttaaaaaca gctaaattgg
    11101 tagcgatttt ttaaatctat catgttttat tcatagtttg ttcatatttc ttttttataa
    11161 tataacaaga agaggtgaga aggatgaaga aaaaaggtta tattctatta ataatagcgc
    11221 ttttgtcgct aacgttaaac tggcttccgg agattgccca cgcgcaaaaa gaagcaacag
    11281 gaactactta tacaactgca accacaaacg aattaatgga tatgtttcta cctcactcca
    11341 tccaaaatcc ttatattgaa acgacaaaaa atagcgcgga attaatgttt gtaacagagg
    11401 aagccgccac gattaccacc gaaacaaata atcaaacgca atcaattgct ggtagcaccg
    11461 aaaaccatca atttgcatta gctaatttgc aacctggaaa taatttagtg acaatcacag
    11521 cgacaatgac agatgggact agtgagagca aaacaatcac cataaacctt ccagagaaac
    11581 caaagaaaaa ctctaaatcg tttcatgatc attctaaaaa ccaacaagtg acgcatcgaa
    11641 aaaaagggca cttattataa taaaaaagga agcactcatt cataagaaga gtgcttcctt
    11701 tttcgttaat ttctacgtcc aaatgtaaaa ccaagtgcta ctaaacttac ccctgttaca
    11761 aatgggataa acgggttcga atccccagta tgaggtaaaa cccctgttgc ttttacgaca
    11821 ccgtctacgc ttgttgtgct agtcactttt tgcacaggtg gaatggtgat tttggataag
    11881 agtgtttttt caatcgttag ttgtaatttt tgaccggctt gtaaagtatc cgatgtgaga
    11941 ttgttccagt ctttaatttc tgcaacagag acatcaaact tattagctac tccaggtaat
    12001 gtatcgccat ctttcacttt atagatgact ttaattttac cattttgttc ggaatcttta
    12061 acgatttcaa gtggaccaaa atctgtttcg actgtttttt caatcagttg cttttcagcc
    12121 ggaataaatg gtggttcttc tttaaccggt ggcgctggcg gggttcctgt tccttgtcca
    12181 ccgctaccgt aatcattcac tgtcgcattt ctcgaaacag cctctaggtt atcaccggat
    12241 agcgttgctt tattcgtata gcttttttgt ttcgtcgtaa ttttcgtatc ataagtaatg
    12301 acaacagatt gattatttaa cgttccaata gataattcaa aattgcgatc tgcatccagc
    12361 gtaattggct ggatattggt agttatcact tttttgttgg catcgcggta tttgattgtt
    12421 gcacttccaa gcagattttg ccctgagcca agcgtatccg tgtaaacggc attatcaata
    12481 ggtgtcagcg cattatttaa agtaacagtc caatgtaaaa tactcaagtc tttatcatcc
    12541 attcgccctt gcttaaaaac gattgttggt gagcccgtac cgccaccagt attaactttg
    12601 ctaataaagg cgtttatcgt ttgggtcgaa tttttcacag gaaaagcaat tggatttact
    12661 tgatctgttt gaatattttt gctgttaaaa gttgcgttat aataaaggct gccacttaaa
    12721 tctgtatgtg tatttacata gtcggtaaaa gttaatgtaa tggttcccgt tgcttgatca
    12781 atggttgcat ttgcgatcgt gtttccttgc gaatccataa gagggaatcc gccataatta
    12841 attaatttta gctgattagg aatagtaagc gtcattgttt ctccgcttgc aactggctgt
    12901 gtaataacga aatcatacgc cactcgcact ttactatttt ccttaaaatt cgttgtttgc
    12961 tccccgtttt gattttgtaa tgatacatta gtaaaaaaac tgctgccgta atctgttgca
    13021 gcttctgctt ttgggcttaa aaatccagtg ataattaaac atataattgc aaatactaac
    13081 catctttttt tcattttgtt tcattccccc ttaaaacatc tatctttata gttcccacaa
    13141 cttgcttgtt aaaaaccgta caatgatttt gcgcacaaaa aaacgccaga acaagtctga
    13201 cgtttttctt tttatagctg caataaatat tggtaactgg cttctagtgt ttcgaacata
    13261 gctcgtttgg atctatcttg ctcaatgcaa tagtactcga ctccgtttgc ttcgccccat
    13321 tcaataatag cgcgaaaatc cacttcacct tgccctattt cgactaaatt attatccata
    13381 tcttctagtt caaaaccgct cacaaaatct ttcatatgca caatcggcgc gcggccgctg
    13441 tagcgtttaa taaattctgt ttcatcatgt ccagctgcgc gaatccagta agtatcaggt
    13501 tcagcataaa tacaaatacc gtcaactggg tcggtaatat aatccatcac tctgcgacca
    13561 tgaatgcatt cattgaaatc gtattccgga ttatgaagac caatgcgaaa acctagtgga
    13621 tgtagttttt ccgccgcatt aattaacgcc gcttttgttg ccgtgtagcc cgctgtcgtt
    13681 tggtcctctt cttcaatata tttgtcaaaa acagttttac aatcaaagaa ataagcttct
    13741 tcaatgatgc catccaaatc attcataaaa cgatcatgct tgatgtgcat gccgatcact
    13801 tttaactcat atttttgcag taaacgacgt acctcgcttg gatcattgcc acgcatacca
    13861 tcaagttgca catatcgaaa gccgatttca tgcattttcc ggagcgtacc ttctaaatcg
    13921 cgctccattt cttttcgtac agaataaagt tggactgcta ttttttcttt tatattcatt
    13981 gtttctccgc ctttccttat gcctttaaat ccagccaatc aacctcagac gctgttaatt
    14041 taatcccggc cgctgcaacg gaagattgaa gttccgtagc attttccgga ccgatgacag
    14101 cggctgtcgg gaatgattgc gttaatacat aagcaagcga aatttggatt ggagtgcaac
    14161 ctttttggtt agctagttgc ttggcacgac tgtatctttc ccagtttgcc tcactataat
    14221 aaacttcgac catttccgta tcgcgcgtgt cttcctcaga aaatctacca gagaaaaatc
    14281 cgcctgcttg tgatgaccaa gaaaatagtg gcaaattcgt cgcctcatgc cagcgaatca
    14341 tctcttcact cgccgaaaca caattttccc agcgtggtcg attcactttt gccaaactaa
    14401 aattagggct gttaaagctt agtggcgtca atccatggct cactgcatat tcattcgctt
    14461 cgataatacg cgggagctcc cagtttgaaa gtccgatagc ataaacgcgg ccatcttcca
    14521 cttctttatg catcgcctcc ataataggac ccacttctac atctggattg tcgcgatgaa
    14581 gtgcgaataa ttcaacatga tctgtttgta gcgtatctaa actaaccgaa atatcttcgt
    14641 gaattgcttc cggagtaacc cgcggcacgt cgcttgcttc ccgaactgga tgcccgcctt
    14701 tcgtttggat aatgacacta tcacgatttc ctctcatatt catccacgcg ccaatcgctt
    14761 tttcactatg gcgataatgg cgcgccgtat caaaaatatt tccacccatt tcaaaatatt
    14821 gatctagtac tggacccgca aaatccatat tatctgcacg taagaaatct cctgcaccca
    14881 tcactaaatt agagcaagct atctcgattt tttgtccatt ttttctgccg ttaacgataa
    14941 ttttttccat tatgcttcca ccccactcgc ggcaatttta tcgactacaa gtgttgtatt
    15001 cgaatctttt acgagtgttg caggaatcgc tactgtcggt tctttttcca ctacttgttt
    15061 cacgatatca atttttttct cgccagttgc tactaaatat atttctttcg ccgctaaaat
    15121 ttgttgcata ccaagagaaa ttccgtgtgt taatggcaaa tctgtatcaa aatatttgct
    15181 catgacgcgt ttcgttacat catcaagttc cacgacatga cagttcacat ctactggcac
    15241 aaatggctcg ttgaagccaa tatgcccatt aagtccaatc cccagcaaaa taaaatccat
    15301 tccgccacgg tcgtcgataa acttgtctac acgagcgcat tcatccgtta agctcgttgc
    15361 tttcccatcg aaaaagcaaa tttgttcact agaaacattt ttcaaacggt cgaaaaatgc
    15421 atcatagagt gtttggatac agctaccttt tgtttcgcgt ccaaggccaa cccattcatc
    15481 caaaccaaca aattgcgtct cactaaaatc tacttcgccc gtttgattcg ctttaataag
    15541 cgcttctatt gttagtaaag gcgtgtcccc accagcgata caaattaaac ttgcaggttt
    15601 ttcttttacc aattcaatga ttctttggct cactgtttgc gccacgagtt gttcactttc
    15661 attaataatt aatttcattt taaaatcaac ctttcttatt agaaatccaa gtctagtgca
    15721 tcgtgcgcag cttggcgttc tgatacaact tcttcttctt taatcaagct cttctcatac
    15781 attttgaaga acggatagta catacaaacg gctgctgcga gaacgaagat gattaaaata
    15841 atcgcgcgcc aatccatcgt cgccaaatac tgcgcgagtg gaatcggtgt cccgccaaca
    15901 ttcgcaatcg gcggacgaac ccaaccaaag tggaacacaa accattgccc tactgctaaa
    15961 attggcgttc caagtacgaa tggaataaac aaatacggat taaaacagat tggcaaaccg
    16021 aatacaactg gttcagaaat tgtgaaaatc gctggaacaa ccaacacttt tccgaccgct
    16081 tttaattctc ttgatttact aaatagcgca aggataacta atgcacctgt aataccagaa
    16141 ccagagaagc ccatgaagta atcccagaag tttggcgcaa atacgtgcgg aattggttct
    16201 cctgccgcat atgcagccgc gttcgctcct aaatattgtg tcataaatgg aagcacaaaa
    16261 ccaatcaaaa tcgcataacc atttagaccg ataaaccaga atagcatttc aaggaaacaa
    16321 ataaggaaaa ccgcataagg cgtatcaata ctattaatcg ccggagctag catcgtcgta
    16381 aaggcttccg gaatgatttg accgctagtg acactttgca ttaaaatact tagtccaaca
    16441 gcactgaata gcagtacaac tagtggaata attgcttcaa aagtagtcgc aatccccgcc
    16501 ggtaaccctt taattcgaat cgtaatattt tttctaataa ataaaccgat aagttctaca
    16561 gaaatcagcg ctgcaaaaat ggcgataaat agccctcttg aatccagaaa ttctgtatta
    16621 agcaccccgt caaccatttt cgtattgagg atgagcgtca ccataacagc tgccatcaca
    16681 ctatgtaaca caggtacttt catttgtttt gcgtggctat aggaaattgt tatagccgca
    16741 taaatcgata gtaatccaaa cgtaaattga aacggtaagt taagcgctgc tgcattttga
    16801 acaaagaatt ctttcacaac agaacctgct ggaaacatat ttccgattgc tgaaataatc
    16861 agcgaaaatg atccaataat taaaaccgag atcaaagcaa tcatcccatt ttttattgag
    16921 gaaatatgac gttgtttttc aattctagct gcgacaggtt caaaatattt ctccataaaa
    16981 gcaataaaac ggttcataaa agattgtttg tttttactcg acatgttgtt tccctccact
    17041 tttttatttg ttcagtttaa gaataattgc gtcttttaaa atgtttgcgc cattaacagt
    17101 gccgtaatct ttcgtatcga tgacttgaat tggtttatta tattccgccg caatttcact
    17161 taaatgttta agttgatgtt tgatttgagg accgactaaa ataacgtcaa agtcttcaat
    17221 atgctcgcgt aattctcctg ctggatgcgc ctcaattttc acatctgtat tcgtgagctt
    17281 ttcactgttt tgggcgattt ccttcatttt tgtaaccatt acccctgtag atgcgcctaa
    17341 gttacacact aaaagtacat gtaattgatt gatttccatt tacttttcct cctcttttct
    17401 taatgtttta atctcttgat gcatttcaat catttctcga attaaagtcg atgctaagat
    17461 ggtattcatt aaagtatctt gcgcatgtac gagtaaaacg gaaaaatttg cttgttcccc
    17521 tcttgtttct tgaatcagca tttccgtttg tactttgtgc gcttcaatca ttaggtcatc
    17581 tgcttctttt aaaagttgtt ctactaattc tgaatctgat tcttttgcgg cctgtaatgc
    17641 ttcaattaat ttagaaaacg aatcccccgc cagtgaaatt aatgaaaacg atattttttc
    17701 tatgtccatt atgaaaccct ctctcattca aagatagccg acttaacgta atgataaata
    17761 tcacgttttg agctagccat tttaattttt tgcatttttt cctcgtccag cgctaacttc
    17821 attaattgtt ccacgatcaa gtgtgcctct tttgttttta aagctaaggt gaaaatgaca
    17881 tgaaccggct cctcgtatct atcgaaaaac atgatgccat cctcaataat cgtcactcca
    17941 atgccatcca tcaaaacacc gtcacttgcc cccgcatgtg caatgacaac acctggcgca
    18001 acgaccatat acggcccgta tgcttttaag ttatgaatga ttttttcatg ataactcggc
    18061 tcaatgactt ctaaatgctc caaacatttt gttccaagct taattgcctg cctccatgtt
    18121 gggcatgttt cttccataac aatcgcttct tctgtaaatt gaaacggtgg tataagcctt
    18181 tttggtgttt caccttcatc cgatataagc gcttccaata aatcgaattc taatttactt
    18241 aaattagtaa tttgcgtgtt ttcgccaata atcgctaaaa tcttactgaa cttattaata
    18301 atctgtttat cacttttgat gagtttcatc cgtaaatgct tttgcagtaa ttccatatcc
    18361 tctttttgca aatagctatg aatccggagt acttttgcgt cttgcatatc tggtaaatcc
    18421 actgtgctaa tcacaaaatc aaaatcagcc atcatcgcgc gtttgaactt tctgaggcca
    18481 attgtttgaa tcgattcaaa ctcaaacata cgctttaact gaatcgcaat catttttgaa
    18541 acagcgacac cttccgggca aataatcagc aaattcggct tcatttcaac tgtttgttta
    18601 ttgcgttgta cctcagatgc aaaataaata gctaaaaatg aaatttcttg agagctgaca
    18661 gaaatcggca ataacggctt gagtgcatcc aaactctcct tcacacgcat aaaaatttct
    18721 cgattatcgc gcataaattc attaaaaatc ggattctcga tagtaactcc ggcgcgaaca
    18781 cgcctaatca ttaatttaat gtgtgctttg atttgcgtga aaaaatccgt atcgccatgc
    18841 acaaaatcca cttgataaat ttcacccatt ttttcgcaaa tacctgttac aaatgcttca
    18901 attaccgcct catcttcacg cccatattga tactgcttca aagacccaat aattgttgct
    18961 aacgcctgat caagctcatc tttaatcata aaatctgctg taaactgaaa atccggtttg
    19021 gcttcatgct gcttcagtaa aatcgcaatt agcgttaagt aaagctgctc atccatcgca
    19081 cgtgtcatat tctcctccac cgaatgcgcc tcacgattca cctcctgcaa aatctccagt
    19141 tcaaaaagat tataaaaaaa taactcgcct tttttagata agctattttc cgaatctaaa
    19201 aactgataaa attcgcggat attaataaaa cgcaagaaac ttctagcaaa aagcgatgtt
    19261 ttcgtaatta aatttccagt cactagaaag ccatgcctag gctgatgcga taaatctaaa
    19321 ttatttaaaa aaagttctcc ttcaatagca cgtagatgat ttagcacaga ggatctggaa
    19381 ataaacagga cttcttcaaa ataagtaacc gggagcactt cttcacttaa aagcagtttt
    19441 agcagtaaaa attgctgcac ttcttcttgg ctgtaacgat attttttcgg cgtaatttgt
    19501 tgcttaaatt tacgcacaac cggatttacg atattctttt ccggaagtag cacccctttc
    19561 cttgtatgtc tgataagagc tggtaatgtt tgctcatgga gaaaaatatc gattttttcc
    19621 aaactataac gaacacttcg ctccgaacaa ccaagcgcgt tagaaatata accaatattt
    19681 ttaaaatctt cctgctccat aagaaaatct aaaatttgaa tacactgctg atttagtttc
    19741 atcaggtatc actcctcttt ctaaattcaa tttatcattt tcatgatagg gcttacaata
    19801 agctatatag ctatttttgt cagatacgta gggacaaaaa aactatccat tttactataa
    19861 ctggaaaaaa accttgccgg aataggtcgg agctactgaa agcacaaaaa aagccttcta
    19921 cattcactgt aaaaggccta ttatttgaac tatttatctt ttttcatata gaaagttaaa
    19981 ataattgcga tgaaaaccat taaaaatcca acaatcgggg tataacccaa accaatatat
    20041 tccgtaacta atccgccaat aaatgcacct actgctatcc caacattaaa agctgaaata
    20101 ttaagtgccg aagccatgct caccgtttct ggcaaatacc gctctgccaa ttgcacgaca
    20161 tacaactgca aaccagacac attcataaag gcaaaaaatc ccatcaacat aatagtcatt
    20221 aatccaaaaa tcgcgttggt cgatgtaaat tgaagtaata ataacgtaat cccttgcaaa
    20281 ctaaacatca cgaacagtgc cttagccggg cgctcattcg caaaatgccc accaatcgta
    20341 ttcccaatcg caaccatcac accatacaca ataagtaaaa taacaatcat gcttgtagaa
    20401 tagcccattc cgctaaacat cggcgacaaa tacgtataaa ccacaaaagt accaccatag
    20461 ccaaacgctg tcatgagtaa caccatcacg atttttttat taactaataa ttgtccaatc
    20521 gctttaaatg aaatactttt tccattggat aagtttttcg gaacgaggaa aaaattagca
    20581 ataatcgcaa tcacgccaat cgcaacaata aacaggaatg acatccgcca accaaatagt
    20641 tgcccgataa acgtcccaag cggcacccct gtcacagtcg ccaccgtcaa ccctgtaaac
    20701 atcaccgcaa tcgcactagc tcgtttgctc ggatgaacca catcggcagc gataacagaa
    20761 gcaatcgaca taaacacccc atgcgcaaac gccgcaacaa cacgcccagt aaggagcatt
    20821 ccaaaactca cagcaaatgc cgagacaaga ttccctatca gaaacacgag catgactaat
    20881 aataacaaat ttttacgatt catcttcgcc gtcatagttg ttaaaaccgg cgctccaacc
    20941 atcacaccaa gcgcatatat cgatacagtt aaaccagccg tactaatcga cacacccata
    21001 ctagaagaaa tcagcggaag cagtcccaca ctaataaatt ctgttgaacc aatcccaaac
    21061 gcactaatcg ctagcgccaa aagtgtcaaa ttaggattta cttttttcat atccacatcg
    21121 ttccccccta aaaaattgca aattgtttcg ttctgttata cagtatctta tataccgtac
    21181 agaataacaa gaaggtactt aaaagtcata tagatactaa aaagtgccta taggaggatt
    21241 acgatgacta aagtatataa tatcggcgtc gaagctacac tagaagttat aggcggaaaa
    21301 tggaaaccag tcatcctttg ccatttacgc gaaggcaaaa aacgaactgg cgaattaaaa
    21361 cgactcatcc ccaacatcac acaaaaaatg ctcacacaac aattgcgcga gctggaaaaa
    21421 tccggggtta ttgtccgcaa agtatatgaa caaatcccac caaaagtcga gtattcattg
    21481 agtgaatacg gcgaatcgtt gtcggagatt ttgaacaaac tttgcttatg gggcgagaat
    21541 catgtggatc ttttgctcac taagaatgaa gatattattt tgttgaaacg agattaatag
    21601 aaaaatagcc acctctcggg tggctatttt taatgattcc ctatacttaa tatccctgaa
    21661 tcaatttctt ctccatctaa aaaccaatac ccatgataat ccccactgag cgctgtaaac
    21721 ggaactggtg tcttccctac ttccgctacc tttctaagta agtaattccg caaaatccaa
    21781 ccatcattta aagaacgttg ctttaaattc aaaatccgtt ctatttttac ttcacttgta
    21841 tttagttctt tcgctacttc ggcaattgtt aaattcgcaa gcgccaaatt ctccgcaaac
    21901 tcacttttcg ttgctttgat ttgttctttt gataaagtca tttttcagtt ccacctttta
    21961 taaatgtaat aatttttcag cattttcgtg agcgattttt gcttttactt catccgttaa
    22021 atcaagcgta tctaggaaag tcctagcatt ttctggtttt acaaaaggat aatctagcgc
    22081 ataaataaga tgattttcat ctaattcatt taataaaaac ttccattcat tttggtataa
    22141 taagccgctt ggtgtcacat acacattcgt ccggtagtaa tcagaaattt tccgttcaag
    22201 cgttgtccag tggccgagtg tattgtccat tctgtttaaa aacattggca ccatttcacc
    22261 taaatgacct gtgatgattt ttaaattcgg taatttatca aatatacctg aaagaatcat
    22321 ccgcacgact tgaatgccaa catccatatg ccaaccaaaa ccagcagatg aaaatacccc
    22381 tgtcaccaca tcagaccaag catcactggc aaaatattgt tctgtaatag tttctgggat
    22441 aaacgatgga tggaacgaaa tcggtacatc tagtttctcc gccatttcga aaatcggata
    22501 ataaaagcga ttatcaaaat atttgttttc aaactgccct tttacaagtg cacctttgaa
    22561 accaagttct tctacggctc tttttaattc aatagcagca tcttctggtg atcctactgg
    22621 taagacagca aaaccggcaa atcgcgtagg attttgttga atcaccttcg ctagttcatc
    22681 attagctcgc ttacacagag ctaccgaaat ttttggatct aagttttgcg gagaactatt
    22741 tccataagag agtacttgga tatcaatacc atgttggtcc ataaatgcta aacgtttttc
    22801 tgtatcttgc atttccgctg ctgaaggaag ttccttttgc atatattgaa acatttccgg
    22861 actaacctgt ccacttacta aatttccagt gactttgttg atttcattcg taatgacttc
    22921 ggattcaaaa tgttcttcta ttgttataat tttcatgttc attcctcctt aagtaaacaa
    22981 tacccctttt taagttgcta aaatagccac atttcgatac actaataaca attatgtatc
    23041 ataaaaagga gagttttatg aataactacg taaaagtgca tcaaccgttg aatgttgatt
    23101 tacgtacaca aaaaacacaa accaaactat atacggtttt ggagaggttt tatgtggaag
    23161 gtagaacatt tgaatcaata tctataaaag atttatgcga acaagcgcga gtatcacgag
    23221 ccacttttta tcgtcatcat gaggagatta ttcaagtgat tgaagtccag attttgcgaa
    23281 ccatgcagta cttctctttg gaattcgacc aaattatttt aacaaaagaa aatatccaac
    23341 gcttaatcct ccgaactatt caaaaaaatc cgcttttatt tcaagcgatt ttttggagcc
    23401 gggcagaaaa tatttttgtc gatgtagtgt ctggagaaat acttcgaatt agtttgttaa
    23461 aagaagtttc cttttcagat agtcacttta ttcctaatta ttttgctagg atgattttaa
    23521 gtttagcgac agaaattcag caatcgaata aagactatac gaatggtcaa ttagttgaat
    23581 tgatacagga ggcagctcgc tttttacaaa aataaaaaga gcctaagttc ccttagactc
    23641 tctcatttaa tcaatcattt tacggaaatt caaccgttta tttaatagat acattagcgg
    23701 aatcccgaca cccattacga tgaattcact tgcggctgtt gttgcccaag taattaggaa
    23761 cggtaagtca aaaacaatta ctaactccca agcgataatt gccatcgtta gcgagaaaag
    23821 aatcgtatta ataatcatcc gcggaataat tcctttaacg tatttagaaa ttccaatcat
    23881 tagtaaaagc gagatagccg attgtgctac gccaaaaact aaatcaatcc accctaatcc
    23941 agaaaagaat aaattcgtaa taaacacacc tacgataata ccccaaaagt attttttatt
    24001 aaagacgatt agatggttaa agatttctgg tattctaaat tgtaatgcca taaacccaat
    24061 tggtgcaaca atcataccga gcactacata cagtgcggcg ataattgcat tcaccgtcaa
    24121 aattttcatt ttcattattt ttcctcctag tttttttacg tgggatggta tgaatgaacc
    24181 acgtgtggca attttgccaa catgctattt tctcatattt ggaagttaat gtaaatgaat
    24241 tattgcacat aaaaaacggc tacttagagt atagccgttt ttttatctgc tatgtttccc
    24301 attcaacctt ttgcctacaa aataa
//
LOCUS       DASDYO010000028        24296 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.028, whole genome shotgun sequence.
ACCESSION   DASDYO010000028 DASDYO010000000
VERSION     DASDYO010000028.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 24296)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24296)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24296
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.028"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(34..768)
                     /locus_tag="U0290_000982"
     CDS             complement(34..768)
                     /locus_tag="U0290_000982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA pseudouridine synthase"
                     /protein_id="HEM2301028.1"
                     /translation="MERLQKVIANAGITSRRKAEKLIQEGKVTVNGKVVTELGVKVSG
                     TERIEVEGIQLTKEEHRYFLFYKPRGTVSAVTDDKGRTTVADYFADIPERLYPVGRLD
                     YDTSGLLLMTNDGDFANLLMHPKNEVSKTYIARIKGIPEREVIRQLERGVVIDGRKTA
                     PAKVKVRSSDKTKDKAIVEITIHEGRNRQVRKMFEAVGFEVQKLSREEYSFLNLRGLN
                     AGERRELSHHEVKQLKTEARFGKNKK"
     gene            complement(771..1367)
                     /gene="scpB"
                     /locus_tag="U0290_000983"
     CDS             complement(771..1367)
                     /gene="scpB"
                     /locus_tag="U0290_000983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMC-Scp complex subunit ScpB"
                     /protein_id="HEM2301029.1"
                     /translation="MNREEQLGVLESLLFAAGDAGLSTEQLTEVMEITHIEALNLLEL
                     LSDRYNGSADRGLILLELAGTFQLATKKAHAEFLRKLVEVPSNTVLSQASLETLAIIA
                     YRQPVTRMEVDEVRGVQTDGPIRTLVAKGLVTDKGRVDGAGRAKLYVTTSEFLDAFGL
                     NSLEDLPKLADPATDEPDQNEMDLFFDRFNQSKEQEEE"
     gene            complement(1364..2113)
                     /locus_tag="U0290_000984"
     CDS             complement(1364..2113)
                     /locus_tag="U0290_000984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation/condensation protein A"
                     /protein_id="HEM2301030.1"
                     /translation="MVEMNFKVDAFEGPLDLLLHLIGQLEVDIYDIPMAEITDQYMEF
                     VHTMQEMELDVASEYLVMAATLLAIKSKMLLPKQELEIDYDTLEEEEDPRDALVEKLM
                     EYKRFKEAAKELKEKEAERSFYFSKPPMDLAEYDDGTKVAELDVSLNDMLSAFNKMLR
                     RKKLNKPLHTRITTQEISIDQRMDSVLEKLNLQVNHRLRFDELFEEQTKEQLVVTFLA
                     LLELMKRKLVEVEQAESFADLYVQGKGEEIS"
     gene            complement(2129..3439)
                     /gene="lysA"
                     /locus_tag="U0290_000985"
     CDS             complement(2129..3439)
                     /gene="lysA"
                     /locus_tag="U0290_000985"
                     /EC_number="4.1.1.20"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate decarboxylase"
                     /protein_id="HEM2301031.1"
                     /translation="MTFERLGTMNVNAEGHLEIGGVDTLKLTEKYGTPLYVYDVALIR
                     DRARGFKKTFEELGVKAQVAYASKAFSAVAIYQLMAEEGLSLDVVSGGELYTAIKANF
                     PPERIHFHGNNKSAEEIHMALDYGIGCFVIDNYYEISLLEDILIERNEKASVLIRVTP
                     GIEAHTHDYILTGQDDSKFGFGLTNGQAEKAIKQVLHASASFDLIGLHCHIGSQIFET
                     TGFKLAARRIMDKLVEWHQTLGFDSKVLNLGGGFGVRYTAEDEPLEPSEYVRQIMDEV
                     RDVANNNDIDIPEIWIEPGRSLVGEAGTTLYKVGSRKEVPGIRNYIAVDGGMSDNIRP
                     ALYDAHYDAVLAANPEKVAEETVAIAGKCCESGDMLIWDLPLPKSNAGEVLAVFCTGA
                     YGYAMASNYNRIPRPSVVFVENGVDKLIVARETYENLVQNDLSL"
     gene            complement(3620..4438)
                     /locus_tag="U0290_000986"
     CDS             complement(3620..4438)
                     /locus_tag="U0290_000986"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEM2301032.1"
                     /translation="MSLEKVNEAVAKIRESYNGTPKIGLILGSGLGVLADEVNNPTKL
                     SYSEIPHFPVSTVEGHAGQFVFGELENKEVVAMQGRFHFYEGYSMQDVTFPVRVMKEL
                     GVEVLVVTNAAGGVNELYSAGDLMLISDHINFTGTNPLIGPNDEHFGPRFPDMSEAYN
                     LALRVDARLIAQELNLTIREGVYAGFSGPTYETPAEIQMMRTLGADAVGMSTVPEVII
                     ANHAGLRVLGISCITNMAAGILDQPLSHTEVIETTDQVRSTFLQYVKAIVAKIS"
     gene            complement(4457..5641)
                     /gene="deoB"
                     /locus_tag="U0290_000987"
     CDS             complement(4457..5641)
                     /gene="deoB"
                     /locus_tag="U0290_000987"
                     /EC_number="5.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopentomutase"
                     /protein_id="HEM2301033.1"
                     /translation="MPDKFKRVHVVVMDSVGIGEAPDAAKFGDFDVDTFGHIAKHVGG
                     LKMPEMGKLGLSNIREIDGIKKAEKPLAYYTKMQEASNGKDTMTGHWEIMGLYIDTPF
                     RVFPDGFPDDLINQIEEKTGRKVIGNKPASGTEIMAELGEEHVKTGALIVYTSADSVL
                     QIAAHEDVVPLEELYEICEFCRKITLDDPYMLGRIIARPFVGEPGAFVRTPNRHDYAL
                     KPFKPTVMDALKDGGKDVIAIGKISDIFDGEGVTESIRTKSNMDGMDQFIAVLDKDFN
                     GMSFLNLVDFDALFGHRRDPQGYADALVDFDGRLVEVMEKLTDDDLLIITADHGNDPT
                     YSGTDHTREFVPLLVYSPRFKNGGSELELRKTFADLGATVADNFEVKMPEYGTSFLKD
                     LK"
     gene            complement(5670..6563)
                     /gene="xerD"
                     /locus_tag="U0290_000988"
     CDS             complement(5670..6563)
                     /gene="xerD"
                     /locus_tag="U0290_000988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific tyrosine recombinase XerD"
                     /protein_id="HEM2301034.1"
                     /translation="MNDLIEDFLHFLIVERGLSANTIKAYERDLRYFVSYMDVAKGLT
                     DPNTLERSDIVGFMAFARQEGKSARSVARYIASLRSFFHYLMHDGKMSHDPMIQIETP
                     KQAQGLPKVLNLDDVEKLLSSSDTSTPLGLRDQAMMEILYATGLRVTELVSLKMDDLH
                     LHMGFIQTIGKGDKERIIPLGKTATTVLEKYLEEARPKLRRPKYRNDFVFLNHHGQGL
                     TRQGFWKILKGIAKESGIEKPITPHTLRHSFATHLLENGADLRSVQELLGHADISTTQ
                     IYTHVTKLRLKDVYKQFHPRA"
     gene            complement(6718..7170)
                     /gene="fur"
                     /locus_tag="U0290_000989"
     CDS             complement(6718..7170)
                     /gene="fur"
                     /locus_tag="U0290_000989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferric iron uptake transcriptional regulator"
                     /protein_id="HEM2301035.1"
                     /translation="MEGRIGRIKAQLHDASYKLTPQREATVRVLLENEKDHLSAEEVF
                     LRVKDIAPDTGLATVYRTLELLTELRVVDKINFGDGVSRYDLRQEGAKHFHHHLVCLE
                     CGSVEEIQEDLLEDVEKIVESKWNFLVKDHRLTFQGICTDCRQKSKKE"
     gene            complement(7412..8434)
                     /locus_tag="U0290_000990"
     CDS             complement(7412..8434)
                     /locus_tag="U0290_000990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM2301036.1"
                     /translation="MYMTTAEKRKKSRRVWTLIILSVLIFCTFTYSVNAGYSKLPFLE
                     VIKSFFGMADAGTQLIVTEFRLPRIVIALLVGAGLAVSGTILQGISGNGLADPGILGI
                     NNGAGLAVMLYISFFPSTMDVPVLFMPFIGFVGAILTAFVVYGLSYSRSEGLLPNRLL
                     LTGIAVAAAIAALITLLTVRLDPQNYQRYAEWMAGNIWASSWQYVYALLPWLIVLGAI
                     AFMKVKTLDVLSFGDQVATGLGVRVEREKFVLLIVAVGLAAACVSVSGGIAFIGLIGP
                     HIARKLVGSAHRWVMVTAALSGGLLLLLADTIGRLIIQPSEIFAGIVVAIIGAPYFLF
                     LLAKAK"
     gene            complement(8434..9459)
                     /locus_tag="U0290_000991"
     CDS             complement(8434..9459)
                     /locus_tag="U0290_000991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM2301037.1"
                     /translation="MDKSKQIKMNTRPTVAKFILSGGILLLLILALFGIAVGAADINL
                     STVWDALFHYNSSDTQHQIIRSLRVPRVVADMAIGAAFAVAGAIMQGITRNPLADSGL
                     LGLNAGSTFMVAVCFAFMPWLSYNSLILFSFVGAAIGAFLVFGVSSLAGSAMSPTRLV
                     LAGAAVSSLLTALSEGLAIYFQLSQDLAFWYAGGVAGVKWSQLAAIWPWLLGALIAAI
                     LLSRSITILSLGDDIAVGLGEKTTFVKIASMVVVLILAGLAVSVVGPVGFIGLIVPHL
                     VRFLVGVDYRWIIPCSAVVGAFLTLAADIVARTINPPYETPISVIFALIGVPFFLYVA
                     RKERRNL"
     gene            complement(9561..10502)
                     /locus_tag="U0290_000992"
     CDS             complement(9561..10502)
                     /locus_tag="U0290_000992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-hydroxamate ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM2301038.1"
                     /translation="MKKGIILLVSMLLIAVVLTACGDNKSAGKEKVEMRTYTMANGKK
                     VEIPAHPKRIVASEYLGNIVLLGMKPVGARAKQMENPFLKGRVDGIADIGDPVSAEKV
                     AELKPDLIIVSNDDEFEAMSKIAPTVLIPYATSKNVEEDVRQIADLVGEKKAGEAWLD
                     KFHQKAKESRAKLAGKLDPNETVGIYEVQDKDFYVMGQNMGRGGQAIYNALQLKAPAK
                     IQKDVLDGQDWQKISLEVLPEFAADRMFVTSTSSGSAKDGEKTLKDLTNSPIWKNLPT
                     FKAGNVYQMDFDTMFYYDPLAVEGQLDIIVEKLLASN"
     gene            10667..11491
                     /locus_tag="U0290_000993"
     CDS             10667..11491
                     /locus_tag="U0290_000993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301039.1"
                     /translation="MKDLHTDNLQISYDKRIIVDGLDIAIPANKITALVGANGSGKST
                     ILKTMSRLMKPSKGAVYLDGKTIHSQPTRDVAKQLAILPQNPSAPDGLTVFELISYGR
                     SPHQSSFKSITAKDREIIFWSLRVTNLMELADRPIDSLSGGQRQRAWIAMALAQETDV
                     LFLDEPTTFLDMTHQLDVLNLLKQLNQSENRTIVMVVHDLNHASRYAHHMIAIKEGKV
                     IAEGTPTNVMTEQTLEDVFNIKADILIDPRSGVPLCLPYETCNGCEIVKELDSSAK"
     gene            11481..12479
                     /locus_tag="U0290_000994"
     CDS             11481..12479
                     /locus_tag="U0290_000994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2301040.1"
                     /translation="MPNEVYDVTIIGGGPIGLFSAFYSGLRSMKTKIIDAEPAVGGKV
                     RYFFPEKIIRDIGGIPAITGENLVANLKQQAETFHPTIVCSERVVDVTKLSDGTFQLT
                     SHNGSIHFSKTIVIATGSGTFEVNKLEALHAEDFPFAIHYDVKNIEQFRDKVVVVSGG
                     GNSAIDWAQTLEPIAKQVHLIYRGEDFKAHEESVRELQNSRVEIHIHHEINELIGTNN
                     QLTKINVCCNKTQATKTIQTDALFINHGVKVDLGTMAEWGFEQADFGIVVDDEMKTTV
                     PGIFACGDSATYPRKIRIIAAGLHEGPIAINSAKKYLEPTAADEAMISTHHESFIG"
     gene            complement(12495..13115)
                     /locus_tag="U0290_000995"
     CDS             complement(12495..13115)
                     /locus_tag="U0290_000995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2301041.1"
                     /translation="MDEKRLKILEVAMGEFTEKGYQAASTNKICAKAGVSKGLIFHYF
                     GSKEKLYIAAVSYAVDFATKEVRLEGEHWGDFVEMAIWSTKMKLDFNRKYPAVFGLIM
                     QAYGNPPVALKDKLEGFFDKAIERSEAQMNQVLSEMKLKKDVNMDAARKVMAALFKHI
                     TEISTVYLQSHPNATMEDFVPLAKDFTEMMRIVEFGICEEKKDLGE"
     gene            complement(13115..13930)
                     /locus_tag="U0290_000996"
     CDS             complement(13115..13930)
                     /locus_tag="U0290_000996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301042.1"
                     /translation="MNILHIEWKTRIKSLVVWAVVVIVILGVFMAFFPSMQSSGMQDL
                     VNTKMNALPQDMMKILHMDSMADLTNIDAYFAYVFQYIFIAACVYAALIGAQALIKEE
                     TDGTIEFLYAQPITRSSLVFWKMIGNLLSFVAFWVITFVASVALVLFLKPSGVDGGNL
                     VMELVRVFSSELLVAAVFMSAGFMVSSVLRSAKQASPVALALVFLTYILGIMAGLNDK
                     VDFFQYFSPINYAIPSEIMDKGITGTNALISCGVIVVMVAMTFVLYKKKDLKV"
     gene            complement(13927..14814)
                     /locus_tag="U0290_000997"
     CDS             complement(13927..14814)
                     /locus_tag="U0290_000997"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301043.1"
                     /translation="MEAIKVESLTKNYHKKRAIENVNLSVNEGELYGFIGPNGAGKST
                     TIKVLLNFIYATSGSATVLGKDVVKDSAEIKKMVGYVPSEVRYYPQMTANDIIHYAAK
                     FHHIENATQKMNKYYEMFSIDPKKRFGEMSLGNKKKVAIVAGLITEPELFILDEPTNG
                     LDPLMQHYLFKEMTERNKEGMTIFLSSHNLREVQEYCTRAAFIRNGNIIAVEDIANQQ
                     MTGKVIALKGTNLPLEKLTNAGARIIEKEAGKARLIFDDDIKTILPLLQEKEITDLTI
                     TNQELEDKFMTLYEGGEIK"
     gene            complement(15288..15845)
                     /locus_tag="U0290_000998"
     CDS             complement(15288..15845)
                     /locus_tag="U0290_000998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM2301044.1"
                     /translation="MDSLEEKTLHTEKIFSGNIIELQVDDVELPNGEKGKREIVKHPG
                     GVAIIPFSADGRMYLVEQFRKPLEKNIIEIPAGKMEPGEDPLVTAKRELEEETGFQSD
                     DLTYLTSFYTSPGFASELLYIYVARDLRKMEHPLAQDADEFINLVKVTLEEAEQLIAQ
                     QCIHDAKTMYAIQYWKMQLLIEENE"
     gene            16119..16778
                     /locus_tag="U0290_000999"
     CDS             16119..16778
                     /locus_tag="U0290_000999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-bromo-4-chloroindolyl phosphate hydrolysis
                     family protein"
                     /protein_id="HEM2301045.1"
                     /translation="MTVFKKILAFTGSIFLVMLLAGILTSLIHSGLVIAAIVIAVAAI
                     LFFFSSKAGDRAQMIATGLTKKEYKYIRTNLEEARVKIIRLQKIMTQNKALYSFQERN
                     KTLLLTKRIYGIVKDEPKRFYEAEDFFFSHLDSLVELTEKYAFLEKQPVKDKKIYQTL
                     SDTRTLLNDLSRVIEKDLFTLLNQDVNNLDFELEVAKNSISKQKKKFERGTKDDREQA
                     K"
     gene            16756..17955
                     /locus_tag="U0290_001000"
     CDS             16756..17955
                     /locus_tag="U0290_001000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxic anion resistance protein"
                     /protein_id="HEM2301046.1"
                     /translation="MTENKPSEETNELKDLVVEKEFNQTLDDLLANPFGSDGESAASI
                     VNNETDAAPRLVDMLTETNKKQALELSKQIEPGNQAAILGYGAPAQAKLHDFSHSMLA
                     HVQKQDVGPIGDIISDLMYRLQEADPDELAARNKNVFTKMFHRVKQSINEITSKYQKI
                     GTQIDRIALKLEHSKKRLMEDNSFLEQLYDKNKDYFQALNIYIAAGELKLEEINTKML
                     PELRKKAEQTGDQMDYQEVNDLTQFADRLDKRVYDLRLSRQITIQQAPQIRLIQNTNQ
                     ALAEKIQSSIMTAIPLWKNQVAIALTLLRQQQAVAAQRQVSETTNELLKRNADMLKTN
                     AIETARENERGIVDIETLKETQSSLIETLQETLKIQQEGRAKRAVAEKELVTMEQELK
                     ERLLEMK"
     gene            complement(17992..19062)
                     /gene="dinB"
                     /locus_tag="U0290_001001"
     CDS             complement(17992..19062)
                     /gene="dinB"
                     /locus_tag="U0290_001001"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase IV"
                     /protein_id="HEM2301047.1"
                     /translation="MDTSRKIIHIDMDAFYASVEQRDHPEFRGKPLIIGGDPNKRGVV
                     ATCSYEARKFGVHSAMPTRQAAKLCPNGIFIHGNMAHYVEVSNQIREIFSRYTDIIEP
                     LSLDEAYLDVTENKKGMKSATMVAREIQQTIYQELGLTASAGVSFNKFIAKIASDFKK
                     PAGITVVTPEEAEAFLEQIPVTKFYGVGKVTAEKLHRLGIETGADLKKWSEWDLIREL
                     HKHGYHLYRHVRGRSNNIVNPHRDRKSVGKETTFEFNVLDSRVLEQSLMQFAKKVEER
                     LIKLQKHGKTVVLKLRYSDFTTITKRLTLNEYTNDASQIYQAAALLLRESYTGQDSIR
                     LIGLTVTNLKPVYFENLRLEGL"
     gene            complement(19171..19962)
                     /locus_tag="U0290_001002"
     CDS             complement(19171..19962)
                     /locus_tag="U0290_001002"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2301048.1"
                     /translation="MNPFLKNKTVLITGASNGLGAEIARQVAMSGGNVIITARSTKKL
                     IELQKDIHDNFSVEATYFTLDMTDFEQVKQVSAEINASYQIDVLVNCAGFGLFENAVD
                     IPFETIEKMFDTNVLGLIQLTQLILPQMQARKAGHIINIASQAAKIATPKSTVYSATK
                     YAVLGFSNALRLELMPDKIHVTTINPGPIATNFFDVADKSGNYLETVGKLVLKPEKVA
                     RKTVQIMGTKRREINLPFVMNIATRLYQVMPQVIEFFGKGAFLKK"
     gene            complement(19967..20887)
                     /gene="rnz"
                     /locus_tag="U0290_001003"
     CDS             complement(19967..20887)
                     /gene="rnz"
                     /locus_tag="U0290_001003"
                     /EC_number="3.1.26.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465501.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease Z"
                     /protein_id="HEM2301049.1"
                     /translation="MELVFLGTGAGVPSRGRNVTSIALSMLNERNTIWLFDCGEATQH
                     QIMRSQIKLSKLEKIFITHMHGDHIFGLPGLLSSRSFQGGDSNLTIYGPAGIAEYVET
                     SLRLSGTRLTYKINFEEIEPGLIFEDEMFLVTADDLDHGVRSFGYRIVEKDKQGALNA
                     EKLKADGVEAGPVFQKLKNGEIVTLADGRVIDGKNYIGEPQKGKIISIFGDTKETANE
                     LELALNADILVHEATFEGDKAKMAGEYMHSTTLQAANLAKTANVKKLILTHISSRYDR
                     DASKELLIEAKTIFENTEIAYDLAVFPIGE"
     gene            21188..22663
                     /locus_tag="U0290_001004"
     CDS             21188..22663
                     /locus_tag="U0290_001004"
                     /EC_number="1.1.1.49"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate dehydrogenase"
                     /protein_id="HEM2301050.1"
                     /translation="MTDELEQKALITIFGGTGDLANRKLYPSLYHLYSKGSLGDNFAV
                     IGTARREWSNDFFRDKVKESIKDIDGSEKDADAFASHFYYQSHDVTNKESYVTLKDLS
                     DELDAKYELGGNRLFYLAMAPNFFGTIASRIKSEGFVDTDGFHRLIIEKPFGHDLASA
                     EELNNSLRQAFKEDEIYRIDHYLGKEMIQNISVIRFANSIIESLWNNRYIDNIQVTLT
                     EVLGVEDRGRYYDESGALRDMVQNHILQIVSLLAMEPPINLTTREIRHEKVRALRSLR
                     VFEGKEVHQNFIRGQYGPGEVGGKELKGYRQEDNVDPHSNTETFVAAKLEIDNFRWAG
                     VPFYIRTGKRLAKKTTQIAIQFKDVPLNLFGQQQSLGGNVLVIHIQPDEGITLHLNVK
                     EPGQGMVTMPVNLNYIHSSPDGMNTPEAYEKLILDCLRGDATYFSHWDEVSLSWNFID
                     HIADVWTNTKDHFPNYKSGSMGPKEADDLIQRDGFQWFPID"
     gene            22782..23213
                     /locus_tag="U0290_001005"
     CDS             22782..23213
                     /locus_tag="U0290_001005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1694 domain-containing protein"
                     /protein_id="HEM2301051.1"
                     /translation="MAENIDDYLEKGMYGAKEINPAEKKKYLGTYRERVLVALTKEEV
                     LTQEYLPELEKAILENSDSKLLLNGLLHYNSLRPYIKLAEKCKHEFSIVTRLEGETDI
                     YLVLACQKAVNKEDIHLYKEAEVEQEEEPVSLLEKVRKLFN"
     gene            23245..23382
                     /locus_tag="U0290_001006"
     CDS             23245..23382
                     /locus_tag="U0290_001006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465504.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301052.1"
                     /translation="MLHIITLSLAILMALQTIYFFIRKNVNMGVMFLLITAALLLLST
                     I"
     gene            complement(23365..23850)
                     /locus_tag="U0290_001007"
     CDS             complement(23365..23850)
                     /locus_tag="U0290_001007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301053.1"
                     /translation="MGISNKTNLIIIASGKPKIWDKSPDIGPVKASEVYTGTFHRLSR
                     AYAEQFANEYLILSPKYGFLRPDDIISKTYDVRFTMKGTSADTIQLEELKEQWQKLQI
                     NPTEPIPMLGGKKFRGLLTSITDGKQVFNFPLDGASGIGVMQRNLKQAIETGIPLNRT
                     E"
     gene            complement(23823..>24296)
                     /locus_tag="U0290_001008"
     CDS             complement(23823..>24296)
                     /locus_tag="U0290_001008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301054.1"
                     /translation="IQATINGTEALEKASGYHVSPDWPGIDFFFYLPYVLENVKKDDR
                     MIKWTRLVVLKEENKIIGEIGGQGNPDETGEIEIGYSIVPDYQNKGYMSEALIGMIAW
                     LEEQPAIHRIFARSYEQNMASIQVLKHNHFVHIKEKDTEEKQGRVMMWEYPIKRT"
BASE COUNT         7412 a         5324 c         4014 g         7546 t
ORIGIN      
        1 cacgctatta gaaagtatat tttgtatgaa aagttacttt ttatttttac caaatcttgc
       61 ttctgttttt aattgtttta cttcatgatg tgataattct ctacgctcac ctgcgtttaa
      121 accgcgtaaa ttcaagaacg agtattcttc ccttgataat ttttgcactt caaaaccaac
      181 agcctcaaac attttacgga cttgacgatt tctaccttca tgaatcgtga tttctacaat
      241 agctttatct ttcgttttat cagaagaacg tacttttact tttgctgggg ctgttttgcg
      301 accatcaatc accacaccac gttctaactg acgaatcact tcacgttcag gaataccttt
      361 gattcgtgcg atatatgttt tggaaacttc atttttcgga tgcattagta agttagcgaa
      421 atccccatca ttggtcatta ataataaacc agatgtatca taatcaagtc gccctactgg
      481 gtataatctt tcaggaatat ctgcaaaata atccgctaca gttgtacgac ctttatcatc
      541 tgttacagcc gaaaccgttc ctcttggctt ataaaaaagg aaatagcgat gttcttcttt
      601 tgttagttga attccctcaa cttcaattcg ctccgtacca ctaactttca cacctaattc
      661 tgtgactact ttcccgttca ctgttacttt accttcttga ataagctttt ctgcttttct
      721 tcttgaagta atacctgcat ttgcaatcac tttttgtaaa cgttccattc ttattcctcc
      781 tcctgttctt tactttggtt aaaccggtca aaaaacaggt ccatttcatt ctgatctggt
      841 tcatctgtcg ctggatcagc aagttttggt aaatcctcta gagaattaag tccaaaagca
      901 tctaaaaact cacttgtagt aacgtaaagt tttgctcgtc cagctccgtc gacacgacct
      961 ttatccgtta caagtccttt ggctactaaa gttcgaatcg gtccatctgt ttgaacgccg
     1021 cgaacctcgt ctacttccat tcttgtaact ggttggcggt aagcaataat tgctaatgtc
     1081 tctaatgatg cttgcgataa aacggtgttg cttggaactt cgactaattt acgtaaaaat
     1141 tctgcatgcg cttttttcgt agctaattga aatgttccag caagctccaa aagaattaaa
     1201 cctctgtcag cacttccgtt gtatcgatca cttaaaagtt ctagtaaatt gagtgcttca
     1261 atgtgcgtaa tttccatgac ttcagttaat tgttccgttg aaagccccgc atctcccgcc
     1321 gcaaaaagca aactctctaa tacgcctaat tgttcttctc tgttcacgat atttcttccc
     1381 ctttaccttg cacatataaa tccgcaaaac tttccgcttg ttctacttcg accaattttc
     1441 gcttcattaa ttctaacaaa gccaaaaacg taacgacaag ttgctctttc gtttgttctt
     1501 caaataactc gtcaaatcgc aagcgatgat tgacttgtaa atttaatttt tctaaaacag
     1561 aatccattct ttgatcaatg gagatttctt gtgttgtaat tcttgtatgg agaggtttat
     1621 ttaacttttt ccgacgtagc attttgttaa aagcacttag catatcgttt aatgatacgt
     1681 ccagttctgc caccttagta ccatcatcat attctgctaa atccattgga ggtttactga
     1741 aataaaagct ccgttccgcc tctttttctt ttaattcttt tgcggcttct ttgaatcgtt
     1801 tgtattccat tagtttttcg actaaagcat cacgaggatc ctcttcctct tctagtgtat
     1861 cataatcgat ttccagttct tgctttggaa gtagcatctt acttttaatt gctagtaaag
     1921 ttgctgccat cactaaatat tcactcgcga catctaattc catttcttgc attgtatgaa
     1981 caaattccat gtattggtcc gtaatttcag ccatagggat gtcataaata tcgacttcta
     2041 gttgtccaat taaatgaaga agtaagtcaa gcggtccttc aaacgcgtcc actttaaaat
     2101 tcatttctac catatctgtc ccgccctact ataatgaaag atcattttgc actaaatttt
     2161 catatgtttc gcgggcaacg attaatttat cgactccgtt ttccacaaaa acaactgatg
     2221 gtcttgggat acggttataa ttacttgcca tcgcataacc ataggctcca gtacaaaata
     2281 ccgccaaaac ttcaccggcg tttgatttcg gtagtggtaa gtcccatatt aacatatcac
     2341 cagactcaca gcattttcct gcgatagcca ctgtttcttc tgcgactttc tctgggtttg
     2401 ccgcaagaac agcatcgtaa tgcgcatcat ataacgctgg acggatatta tcagacatgc
     2461 cgccgtcaac tgcgatataa ttccgaattc ccggaacttc tttacgcgat ccaactttat
     2521 aaagtgttgt acctgcttca ccaacaaggg aacgacctgg ctcaatccaa atttctggaa
     2581 tatcaatatc gttattatta gccacatccc gcacttcatc cataatttgg cgcacatatt
     2641 cgctaggttc aagaggttca tcttctgccg tataacggac accgaaaccg ccaccaagat
     2701 taagtacttt ggaatcaaat cccagagttt ggtgccattc aactaattta tccataatac
     2761 gacgagccgc taatttaaaa cccgttgttt caaaaatttg cgacccaata tgacagtgta
     2821 ggccaattaa atcaaaggac gcacttgcat gaagcacttg tttaatcgct ttttcagctt
     2881 gtccatttgt aagtccaaat ccaaatttcg aatcatcttg gcctgttaaa atatagtcat
     2941 gtgtatgagc ttctatcccc ggtgtcacgc gaattaaaac cgatgccttt tcatttcgtt
     3001 ctattaatat atcttctaat aaactaattt cataataatt atcgataaca aaacaaccga
     3061 tgccatagtc aagcgccata tgtatttctt ctgcactttt attatttccg tgaaaatgaa
     3121 ttctctcagg aggaaaattt gctttaattg ctgtataaag ttctccgcct gaaacaacat
     3181 ctagtgataa accttcttcg gccatcagct gataaatcgc tactgcagaa aatgctttgc
     3241 tcgcataagc cacttgtgct tttacgccta gctcttcgaa tgttttctta aatcctcttg
     3301 ctcggtcacg gattagcgct acatcataaa cgtacagtgg cgtaccatat ttttcagtaa
     3361 gctttaaagt gtccacccct ccaatttcga gatgtccttc tgcatttaca ttcattgttc
     3421 caagccgttc aaacgtcacg ccaatcccac ctttacatta tagattttta aaagttcttt
     3481 tatatagtag cacactaaga agccgagcga caataactat ctgaaaatat tatcaaatac
     3541 gtaaaaaact cagcccaaat ctattatctc cttgcttcag aaaataacaa atttggactg
     3601 agattagcta ccaattattt taagaaattt tagcaacaat ggcttttaca tattgtaaaa
     3661 acgtgctgcg aacttgatct gttgtttcaa taacttccgt atgagaaagt ggttgatcca
     3721 gaattccggc tgccatattg gtaatacaag aaatacctag cactcgtaat ccagcgtggt
     3781 tcgcaatgat tacttccggt acagtggaca tcccaactgc atctgcacca agtgtgcgca
     3841 tcatttgaat ttcagcaggt gtttcataag ttggaccgct aaatccagca taaacacctt
     3901 cacggatagt caaattaagt tcttgagcaa taagtctagc atccacacgt agagctaaat
     3961 tatacgcctc ggacatatct gggaaacgcg gtccaaaatg ctcatcattt ggtccaataa
     4021 gcgggttcgt tccagtaaag ttaatgtgat cagaaatcaa cattaagtct ccagcagaat
     4081 ataattcatt tacgccacct gccgcattcg tcacaacaag cacttctaca ccaagctctt
     4141 tcatcacacg aactgggaaa gtaacatctt gcattgaata gccttcataa aagtggaaac
     4201 gtccttgcat tgcaacaact tctttatttt ccaactcacc aaaaacaaat tggccagcat
     4261 gtccttctac tgtcgaaaca ggaaaatgtg ggatttcgct ataagaaagt tttgtcggat
     4321 tgtttacttc atccgcaagc acacctaaac ctgaaccaag aatcaaacca atttttggtg
     4381 taccattgta actttctcta attttcgcaa ctgcttcatt tactttttct aaactcattt
     4441 ttgttcctcc cttttcctat ttcaagtctt ttaagaaact tgttccatat tcaggcattt
     4501 tcacttcaaa attatccgca actgttgcgc cgagatcggc aaatgttttg cgtaattcta
     4561 attctgaacc accatttttg aagcgtggtg agtatacaag taatggtaca aactcacgtg
     4621 tgtggtctgt gccagagtat gttgggtcat ttccgtgatc agctgtaata attaatagat
     4681 catcatctgt taatttttcc attacttcta ctaaacgacc gtcaaaatca acgagcgcat
     4741 ctgcataacc ttgtggatca cgacgatgtc cgaaaagtgc atcaaagtct actaaattca
     4801 agaaactcat accgttaaaa tctttatcta acacagcgat aaattgatcc attccgtcca
     4861 tatttgattt cgtacggata gattccgtaa caccttcacc atcaaaaata tcagaaattt
     4921 taccaatggc aatcacgtct ttaccgccat cttttaaagc atccattaca gttggtttaa
     4981 atggttttag cgcatagtca tggcgatttg gcgttctaac aaacgcacct ggttcgccga
     5041 caaatggacg agcgataata cgaccaagca tgtacgggtc atctagtgta attttacggc
     5101 agaattcaca gatttcatat aattcttcca aaggtacgac atcttcatgt gctgcaattt
     5161 gtaaaactga gtcagctgat gtgtaaacaa taagcgcacc tgttttcaca tgctcttctc
     5221 caagttcagc cataatttct gttccgctcg ctggtttatt tccaattact ttacgtcctg
     5281 ttttttcttc aatttggttg attaaatcat ccggaaatcc atctgggaat acgcggaaag
     5341 gcgtgtcaat gtataggccc atgatttccc agtgacccgt cattgtatct ttaccgttcg
     5401 aagcttcttg catttttgta tagtaagcaa gtggtttttc tgctttttta attccgtcta
     5461 tttctcgaat attcgataga cctaatttgc ccatttcagg catttttagt ccgccgacgt
     5521 gtttggcaat atgtccaaat gtatctacat caaaatcacc aaatttagca gcatctggtg
     5581 cttctccaat accaactgaa tccattacaa ctacatgtac tcgtttaaat ttatctggca
     5641 tatttactca tccttttcaa ctatattttt taagcgcgcg ggtggaattg tttgtagaca
     5701 tctttcaacc gcagctttgt tacgtgtgta taaatttgtg tagtggagat atcggcgtga
     5761 ccaaggagtt cttgaaccga ccttaaatca gccccatttt caagtaaatg agtggcaaat
     5821 gaatgacgca aggtgtgcgg tgtaatcggc ttttcaatgc ctgattcttt cgcaatacct
     5881 tttaaaattt tccagaaacc ttgtcttgtg agtccttggc cgtgatgatt taaaaacaca
     5941 aaatcatttc ggtatttcgg tctacgaagt tttggtctcg cttcctctaa atacttctct
     6001 aacacagttg ttgccgtttt tccaagcggg ataattcttt ctttatctcc tttaccaatc
     6061 gtttgaataa aacccatatg aagatgtaaa tcgtccattt tcaggctgac aagttccgtt
     6121 acacgaagcc ctgtcgcata taaaatttcc atcattgctt ggtcccttaa tccaagtggt
     6181 gtactcgtat cagaggaact aagtaacttc tcgacatcat caaggttcaa aacttttggt
     6241 aatccctggg cttgtttcgg cgtttcaatt tgaatcattg ggtcatgtga cattttccca
     6301 tcgtgcatta aataatgaaa gaaagatcgc agtgaagcaa tatagcgcgc cacacttctt
     6361 gctgatttcc cttcttgtct tgcaaatgcc ataaaaccaa ctatatcgct tcgttcaagt
     6421 gtattcggat ctgttaatcc cttcgctaca tccatataag aaacaaaata gcgtaaatct
     6481 cgttcataag ctttgattgt attcgcggat aaacctctct ctacaattaa aaaatgtaaa
     6541 aaatcttcta ttaaatcatt cataagcgtt tcctccacaa atcctattct accatgttac
     6601 actcccactg aaaacgttta attaatagaa aaagacttat aatacttttc gcgcaattca
     6661 gtccatcttt tttaatcata aaaaaaagtt tgagataaat tatcccaaac tcttgtatta
     6721 ttctttttta gatttttgtc tgcaatctgt gcaaatccct tggaaagtca gacgatggtc
     6781 tttaacaaga aaattccact tcgattcgac gattttctcc acatcttcta ataaatcttc
     6841 ttgaatttct tctacagaac cacactctaa acatactaaa tgatgatgga aatgtttggc
     6901 gccttcttgt ctcaagtcat accgagaaac accgtcacca aaattaattt tatcaaccac
     6961 gcgtaattcg gttaaaagtt ccaacgttct ataaacggtt gcaaggccag tgtcaggtgc
     7021 aatatctttc acacgcaaga aaacttcctc ggcacttaaa tgatcttttt cattttccag
     7081 taaaacgcga acagtagctt ctcgctgtgg ggttaattta taactagcat catgaagttg
     7141 tgctttaatg cgtccaatac gaccttccat tatggttcct cccttggttg ctacaacaag
     7201 ttgtctttct aaattatcat cattatcatt taacaataaa tacagtttat aataattata
     7261 aataaaatgc aagttaggaa ttcacttttt ttagtaaaaa tggcacgtag tcaattccta
     7321 ttgcttatgt ttactaagat atcataaaag caataggctg tctacaatga ttatcaatta
     7381 ctaattaatt tctcgttatc aataataatt attatttagc ttttgcaagc aagaacaaga
     7441 aataaggtgc accgataatt gccacaacga taccagcaaa tatttcggat ggttgaataa
     7501 tcaatcgtcc aatcgtatcc gcaagtaata atagtagccc tccagaaagt gccgccgtta
     7561 ccatcaccca gcgatgtgcg gatccaacta attttctagc aatatgcgga ccaattagac
     7621 caataaatgc aataccgcca ctaacggata cacaagcagc tgccaaacca actgctacta
     7681 ttaaaagcac aaatttttct cgctcaaccc gaacgccgag tccggttgcc acttggtctc
     7741 caaaagagag cacatccaac gtctttactt tcataaaagc aattgcacct aaaacaataa
     7801 gccatggcaa aagagcataa acatattgcc agcttgaagc ccaaatattt cctgccatcc
     7861 attcagcata gcgttgataa ttttgcggat caagccgaac cgtaagcagt gtgataagtg
     7921 ccgcaatcgc cgccgcaaca gcaatccccg taagaagcaa tcgattaggc aacaatcctt
     7981 cgcttctact ataagaaagt ccgtaaacaa caaacgcagt taaaattgcc ccgacaaatc
     8041 caataaatgg cataaataaa accggaacgt ccatcgtgga aggaaaaaag gaaatataaa
     8101 gcataaccgc aagtcccgcg ccattattaa tcccaagaat tcccggatca gctaatccgt
     8161 ttccagaaat cccttgtagg attgttcctg aaaccgcaag ccctgcacca actaatagcg
     8221 caataactat ccgtggcaaa cgaaactccg tcacaataag ttgtgttccc gcgtccgcca
     8281 ttccaaaaaa cgacttaatc acttccaaaa atggcaattt cgaataacca gcattgacac
     8341 tatatgtaaa tgtacaaaaa attaacacgc ttaaaataat taacgtccaa actcgccgcg
     8401 atttttttcg tttttctgcc gttgtcatat acattataag ttcctccttt ctttacgtgc
     8461 tacatataag aagaaaggaa ccccgattaa tgcaaaaata acactgattg gcgtttcata
     8521 tggcggattg attgttctcg ccacaatatc cgccgctaat gtcagaaagg ctccaacaac
     8581 cgccgagcaa gggataatcc agcgataatc tactccaact aaaaatcgta ccaaatgcgg
     8641 tacaatcaag ccgataaacc caaccggacc aacaaccgac acagcaagcc ccgccaaaat
     8701 caacaccaca accatcgaag caattttaac aaaagtagtt ttttcaccta aaccaacagc
     8761 aatatcatcg cctaagctta aaatggtaat cgatctactt agcaaaatcg ccgcaataag
     8821 cgctccaagt aaccaaggcc aaatcgccgc aagctgactc catttcacac cagcaacccc
     8881 gcccgcgtac caaaaggcca aatcctgact taactgaaaa taaatcgcga gtccttcact
     8941 aagcgcagta agcaatgaac taaccgccgc tccagcaagc actagcctcg ttggcgacat
     9001 tgcgctccct gcaagagaac taacgccaaa tactaaaaat gccccaattg ccgccccaac
     9061 aaaagaaaat aaaatgagcg aattataact aagccaaggc ataaatgcaa aacaaactgc
     9121 taccataaac gtcgatccag cattcaaccc aagcaagcct gaatcagcaa gtggattccg
     9181 agtgattcct tgcataatcg ctccagcaac cgcaaaagca gcccctatcg ccatatccgc
     9241 aaccacccga ggaacacgta aactacgtat aatctggtgc tgcgtatccg aactattata
     9301 atgaaaaagt gcatcccaaa ccgtacttaa attaatatcg gctgcaccaa ccgcaatccc
     9361 gaataacgct aaaatgagaa gcaacaaaat cccacccgaa agtatgaatt tagcaacagt
     9421 cggtcttgta ttcattttta tctgttttga cttatccatc tgcacatgtt ccttccatct
     9481 aaattatccg ctcattttaa gtgataataa ttatcaatcg caaagaaaat tatatcaata
     9541 tcattcacta agcgcaatca ttagttggac gcaagtaact tctctacaat aatatccaac
     9601 tgtccttcta ccgctaatgg atcataataa aacatcgtgt caaagtccat ttggtaaaca
     9661 ttccctgctt taaacgtcgg cagatttttc caaattggcg agttcgttaa atcttttaat
     9721 gttttctcgc cgtctttagc actcccagaa gaagtgcttg taacgaacat tctatcggcc
     9781 gcaaattcag gtaaaacttc cagtgaaatc ttttgccaat cttgcccatc taaaacatct
     9841 ttctgtattt ttgctggtgc ttttagttgt aaagcattat aaatcgcttg accacctcgc
     9901 cccatatttt gtcccatcac ataaaaatct ttatcttgta cttcataaat ccctactgtt
     9961 tcattcggat ctaacttgcc agccaacttc gctctacttt ctttggcttt ttgatgaaac
    10021 ttatctagcc acgcctctcc agcctttttt tctccaacta agtccgcgat ttggcgaacg
    10081 tcttcctcca cattttttga agttgcgtac ggaattaaca ccgttggcgc aattttcgac
    10141 attgcctcaa attcgtcatc gtttgaaaca atgattaaat caggttttaa ttccgccact
    10201 ttttctgctg aaactggatc accaatatct gcaatcccat ccacacgccc tttcaaaaac
    10261 ggattttcca tttgtttcgc tctagccccc acaggcttca ttccaagcaa aacaatattc
    10321 cctagatatt ccgaagccac aatacgtttc ggatgtgctg gtatttctac tttctttcca
    10381 tttgccattg tatatgtacg catctcgacc ttctcttttc cagccgattt gttatctcca
    10441 caagcagtta aaaccactgc aattaaaagc attgacacga gtaaaatgat accctttttc
    10501 aattgaaccc ctccagtaat tgataataat tctcaattag tatagcaact ttattcacaa
    10561 agtgcaaatc atttcggcaa agtaacgctt gcatcttcac cataaaaact ctatacttaa
    10621 ccattgagaa tgattatcac cttaccttta aattggagcg atgaaaatga aagaccttca
    10681 taccgataac ttacaaattt catacgacaa acgaatcatt gttgatggtt tagatatagc
    10741 cattccagcg aataaaataa ccgctttagt aggtgcaaat ggctcaggga aatcgactat
    10801 tttaaaaacg atgtcccgct taatgaaacc tagcaaaggc gctgtgtatt tagatggcaa
    10861 gacgattcat agtcagccaa cgagagacgt tgccaaacaa ctagctattt tgccacaaaa
    10921 tccttctgca cctgatggtt taacggtgtt tgaattaatt tcttatggac gttccccaca
    10981 tcaaagtagc tttaaatcga ttaccgcaaa agatcgcgaa attatttttt ggtcattgcg
    11041 cgtgacgaat ttaatggagt tagcggatcg accaattgat agtttatcag gtggacaacg
    11101 acagcgtgca tggattgcca tggcgcttgc ccaagaaaca gatgtactat ttcttgatga
    11161 accgacgacc tttttagata tgacgcacca actagatgta cttaatttat tgaaacaatt
    11221 aaatcaatca gagaaccgca caattgtgat ggttgttcat gatttaaatc acgcatctcg
    11281 ttacgctcac catatgatcg ctattaaaga agggaaagtc atcgcagaag gaacaccaac
    11341 caatgtcatg actgaacaaa ctttagagga tgtttttaat atcaaagcag atattttaat
    11401 tgatccccgc agcggtgtcc ctctttgcct cccctacgaa acttgcaacg gatgcgaaat
    11461 tgtaaaggag cttgattcca gtgccaaatg aggtttatga tgtaaccatt atcggcggcg
    11521 gtcccattgg cctattctcc gcattttata gtgggcttcg ttccatgaaa acaaaaatta
    11581 tcgatgctga acctgctgtt ggcgggaaag ttcgctactt ttttccagaa aaaatcattc
    11641 gcgatatcgg tggtattccc gccattaccg gcgaaaatct tgtcgcaaat ttaaaacaac
    11701 aagcagaaac ctttcatccg actattgttt gcagtgagcg agttgtcgat gtgacaaaac
    11761 tatcagatgg cacttttcaa ttaacttcgc ataacggttc gattcatttt tcaaaaacga
    11821 ttgtcattgc tacaggtagt ggcacgtttg aggtcaataa acttgaagct ctacatgctg
    11881 aagattttcc atttgcaatc cattatgatg tcaaaaatat cgagcaattc cgcgataaag
    11941 tagtagtggt ttctggtggt ggaaattccg ctatcgactg ggctcagaca ctcgaaccca
    12001 ttgccaaaca agtacacctt atttaccgtg gcgaagattt taaagcacac gaggaaagtg
    12061 tccgagaact tcaaaattct cgcgtcgaaa tccatatcca ccatgaaatc aatgaactaa
    12121 tcggaacaaa caatcagtta accaaaatca atgtttgctg caataaaacc caagccacga
    12181 aaacaattca aacagacgca cttttcatta atcacggggt aaaagtagac cttggaacca
    12241 tggcggaatg gggctttgaa caagcagatt ttggcattgt cgtggatgac gagatgaaaa
    12301 cgacggttcc tggtattttc gcttgtggag atagtgcgac ttaccctcga aaaatacgca
    12361 ttatcgcagc gggacttcat gaagggccca tcgcgattaa tagtgcgaaa aaatatttag
    12421 aaccaactgc cgcagatgaa gcgatgatta gcacgcatca cgaaagcttt attggttaaa
    12481 aaaaggattt gggctcactc gcccaaatcc tttttttctt cgcatatccc aaattcgaca
    12541 attcgcatca tttccgtaaa atccttcgca agcggaacaa aatcttccat cgtcgcattt
    12601 ggatggctct gcaaataaac tgtactaatc tccgtaatat gtttaaaaag agccgccatc
    12661 actttacgcg ctgcatccat atttacatct tttttcaact tcatttcact taaaacttga
    12721 ttcatttgcg cctctgatcg ctcaatcgcc ttatcaaaaa agccctcaag tttatctttc
    12781 aatgcaactg gcggatttcc ataagcttgc ataattaagc caaacacagc aggatatttg
    12841 cgattaaaat ccagtttcat cttcgttgac caaatcgcca tttcgacaaa gtctccccaa
    12901 tgttcccctt ccaaacgaac ctccttggtc gcaaaatcaa ccgcataact aacagccgca
    12961 atataaagct tttctttaga accaaaatag tgaaaaatca gccctttgga aacaccagct
    13021 tttgcgcaaa ttttattcgt actagccgcc tgatatcctt tttccgtaaa ttctcccatt
    13081 gctacttcta aaatttttaa tcgtttttca tccattatac tttcaaatcc tttttcttat
    13141 aaagaacaaa tgtcatagca accatcacaa caattacccc acaagaaatc agtgcattgg
    13201 ttcctgtaat ccctttatcc ataatctcag acggaattgc atagttaatt ggtgaaaaat
    13261 attggaagaa atcgacctta tcattcaacc cagccataat tcctaaaata tacgttaaga
    13321 acacaagcgc aagtgcaacc ggagaagctt gcttagcgga acgaagcacc gatgaaacca
    13381 taaaaccagc actcataaat acagcagcca ctagcaactc actagaaaac actcgtacaa
    13441 gctccattac taagtttcct ccgtcaaccc cactcggctt caagaaaaga actagcgcca
    13501 ctgaagctac aaatgtaatc acccaaaaag ccacaaatga caataaattc ccaatcattt
    13561 tccaaaaaac aagactagac cgcgtaattg gttgcgcata taaaaattca attgttccat
    13621 ccgtttcttc ttttatcaag gcctgcgcac caattaatgc tgcatacaca caagctgcaa
    13681 taaaaatata ctgaaaaaca tacgcaaaat aggcatcaat attcgttaaa tccgccattg
    13741 aatccatatg caaaattttc atcatatctt gcggaagtgc attcatcttc gtattcacta
    13801 aatcttgcat tccactactt tgcatactag ggaagaaagc cataaacacc cctaaaatca
    13861 caatcaccac aacagcccaa acaaccagac tctttattcg cgttttccac tcaatgtgta
    13921 ggatattcac ttgatttctc ccccttcgta tagcgtcata aatttatctt ccagctcttg
    13981 attagtaatc gttaaatccg taatttcttt ttcttgtaat aatggcaaaa tcgtcttaat
    14041 atcatcatca aaaataagcc gcgcttttcc cgcttccttt tcgataattc ttgcgcccgc
    14101 attcgttaat ttttccagtg gcaaattcgt tcctttcagc gcgattactt tacccgtcat
    14161 ttgttgatta gcgatatctt ccaccgcgat aatattccca tttcgaataa aagcagctct
    14221 tgtacaatat tcctgaacct cacgtaaatt atgactagaa agaaaaatcg tcattccttc
    14281 tttatttcgc tcagtcattt ctttaaataa ataatgttgc attaacggat caaggccatt
    14341 cgtcggttca tccagaataa ataattccgg ctcagtaata agtccagcaa caatcgccac
    14401 ttttttctta tttccaagcg acatttctcc aaagcgtttt ttcggatcaa tcgaaaacat
    14461 ttcataatat ttattcattt tttgcgttgc attttcaata tgatggaact tggcagcgta
    14521 atggataata tcatttgctg tcatttgggg ataatagcga acttcacttg gcacataacc
    14581 gaccattttc ttaatttcag cagagtcttt caccacatct ttcccgagaa ccgtcgcact
    14641 cccacttgtt gcgtaaataa aattcagtaa gactttaatt gtcgttgatt tccccgcacc
    14701 attcggaccg ataaaaccat aaagttctcc ttcatttaca gacaaattca cattttcaat
    14761 tgctcgcttt ttatggtaat tttttgtgag cgactccact ttaattgctt ccatgttctc
    14821 tcctccacac tcaaattgac cacttagtca actagagtat aatccctttt gaccaggtag
    14881 tcaattaaga accataacac aataaaaatc tgtaagactg tatccagtaa aagtattcaa
    14941 attactgttt tcatgttagc tctttcaaca tgaaaggggg atgcctatga cttttttgtt
    15001 aggaactcct ggaaaggata acccatgacc gtttatgaag cactctcttt tgcagtcgct
    15061 tttacaactt taatgttgtt actaaacagt caaaataaca caaaaaaata accactcata
    15121 aactttggcg agtttagtgg ttatttttat accatattag actagctgcc accttaaatg
    15181 gggcttacat ttgagggtca tgttcttgca tgactctctt ttcatgttta tgataccaca
    15241 tttccattct ttatgccaag tattcccaaa tgagtttttc atccgattta ttcattttct
    15301 tctattaata gttgcatttt ccagtactgt atcgcgtaca ttgtttttgc gtcatgaatg
    15361 cattgttgtg ctattaattg ttctgcttct tccagcgtta ctttgactaa attaataaat
    15421 tcatctgcat cttgcgccaa tggatgctcc attttccgga ggtcacgcgc tacataaata
    15481 tataaaagtt cactagcaaa cccaggtgat gtataaaaag aagtgagata cgttaaatca
    15541 tcggactgaa aaccagtttc ttcttctagt tcccgttttg cggtcacgag cggatcttcc
    15601 cctggctcca ttttgccagc tggaatttcg ataatgtttt tttcgagtgg ctttcggaat
    15661 tgctctacta agtacattct tccatctgct gaaaaaggta taattgccac accaccggga
    15721 tgcttgacga tttcgcgctt gcccttttcc ccgtttggta actccacatc atctacttgc
    15781 aattcaataa tatttccgct aaaaatcttt tctgtatgaa gcgttttttc ctctagtgag
    15841 tccatttctg ccacctacct ctcatttttt tcattataac ataactaagt ccgagtttaa
    15901 tttacatcgc acgactgata acatctattt tctaaatatg gtatgataag aacaaataaa
    15961 ggacaatttc taaaatataa aaaccattca gcttgcctag ttttcgctta caaaatatac
    16021 ttaaatggta ggttaatttc catcaatctt tattttagaa aaatttacta taagaaaagc
    16081 ggacctttta aacaggtact taaaggagaa gatgtataat gaccgttttt aaaaagatat
    16141 tagcattcac aggttccatt ttccttgtca tgcttttggc tggtatcctc acttcactaa
    16201 tccatagtgg tttggtaatt gcagcaattg ttatcgctgt tgcggctatc ctatttttct
    16261 tttcatctaa agctggggac cgtgcgcaaa tgattgcaac tggattaacc aagaaagaat
    16321 ataaatatat tcgcactaac ttagaagagg cacgtgtgaa aattatccgc cttcaaaaaa
    16381 tcatgactca aaacaaagcg ttatattctt tccaagagcg taacaaaaca cttttactta
    16441 caaaaagaat ttatggcatt gtaaaagatg agccaaaacg tttttatgaa gcagaagatt
    16501 tctttttctc ccatcttgac tctttagtgg agctaacaga aaaatatgct ttcttagaaa
    16561 aacaacccgt aaaagacaaa aaaatctatc aaacactttc tgatacgcgc acacttttaa
    16621 atgatttaag tcgtgttatt gaaaaggatt tatttacact tttgaatcaa gatgtgaaca
    16681 accttgactt cgaactagaa gtagcgaaaa actccatttc taaacagaaa aagaaatttg
    16741 aaaggggtac aaaagatgac cgagaacaag ccaagtgaag aaacaaatga attaaaagat
    16801 ttagtagttg agaaagaatt caaccaaacg ttagatgatc tccttgctaa cccgtttgga
    16861 tcagatggtg aatcagctgc aagtatcgta aataatgaaa cagatgcagc tcctcgcctt
    16921 gtcgatatgc ttactgaaac aaataaaaaa caagcattag agttatccaa acaaatcgaa
    16981 cctggaaatc aagcagcgat tcttggatac ggagctccag cccaagccaa actccacgat
    17041 ttttctcatt caatgttagc acatgtacaa aagcaagatg ttggaccaat tggcgatatt
    17101 attagcgatt taatgtatcg tttacaagaa gcggatcccg atgaacttgc cgctcgtaat
    17161 aaaaatgttt tcactaaaat gttccaccga gtaaaacaat ccatcaacga aattacttct
    17221 aaatatcaaa aaattggtac ccaaattgac cgcatcgcgt tgaaactgga acattccaaa
    17281 aagcgtttaa tggaagataa ctctttccta gaacagcttt atgataaaaa taaagattac
    17341 ttccaagcac ttaacatcta cattgctgct ggagaattaa aattagaaga aattaataca
    17401 aaaatgctcc cagaacttcg caaaaaagca gaacaaactg gcgaccaaat ggattaccaa
    17461 gaagtgaatg acttaacgca atttgctgac cgtctggata aacgagtata tgatttacgt
    17521 ctaagccgtc aaatcactat ccaacaagca ccgcaaatcc gcttaatcca aaatacaaac
    17581 caggcacttg ctgaaaaaat ccagtcttcc attatgactg cgattccact ttggaaaaac
    17641 caagtagcta tcgcgcttac cttgctccgt caacaacaag ccgtagcagc tcagcgccaa
    17701 gtttctgaaa caacgaacga acttctaaaa cgaaacgccg atatgctaaa aacaaacgct
    17761 atcgaaacag cgcgtgaaaa cgaaagaggt atcgtagaca tcgaaacact taaagaaacg
    17821 cagtccagct taattgaaac cttgcaagaa acgcttaaaa tccaacaaga aggccgtgct
    17881 aaacgtgccg tagcagagaa agaacttgta acaatggaac aagaacttaa agaacgttta
    17941 ctggaaatga aataatcaaa aaggctagca cctaaatcgt gctagccttt tttatagtcc
    18001 ttctaaacgt aaattttcaa aataaacggg ttttaaattg gttacagtaa gcccaatcaa
    18061 acgaatacta tcctgaccag tatagctttc tcttaaaaga agggccgccg cttgataaat
    18121 ttgacttgca tcattggtat attcgtttaa agtaagccgc ttagtaatgg ttgtaaagtc
    18181 actgtagcgt agttttagta ctaccgtctt accatgtttt tgtagtttaa tgagccgttc
    18241 ttctactttt ttggcaaatt gcatgaggct ttgttcgaga actcggctat ctaacacatt
    18301 aaattcaaaa gtagtttctt taccaacgga cttgcgatca cgatgcggat tcacaatgtt
    18361 gttagaacga cctcgaacat gtcgatataa atgatagcca tgtttgtgta attcgcgaat
    18421 aaggtcccac tcgctccact tcttcaaatc tgctcccgtt tcaattccta aacgatgcaa
    18481 tttttctgcg gttactttcc ctaccccata aaatttagtg actggtattt gttctaaaaa
    18541 ggcttctgct tcttctggtg taactaccgt aataccagca ggtttcttaa aatcagaagc
    18601 gatttttgcg ataaatttat taaatgatac gccggcagaa gcagttagac caagctcttg
    18661 gtaaatcgtc tgctgaatct cgcgtgcaac cattgtggcg gatttcattc cttttttgtt
    18721 ttcagttaca tccagataag cttcatctaa agagagcggt tcgataatat ccgtatatct
    18781 ggaaaagatc tcgcggattt gattagaaac ctctacataa tgagccatat tgccgtgaat
    18841 aaaaataccg ttcggacaaa gtttagcagc ttgcctggtg ggcatagctg aatgcacacc
    18901 gaatttgcgc gcttcataag aacaagtcgc aacaactccg cgtttattag ggtctccacc
    18961 aataataagt ggcttccctc gaaactcagg atggtcgcgt tgttccacag atgcataaaa
    19021 agcgtccata tcaatatgaa taatttttct actcgtatcc ataactgcat ctcctctgaa
    19081 acgaacaaac gttcttattc aattataaag gttatcctca ttaattacaa gaaaaaaata
    19141 ccctattttc ataagatatt ttcttctgtt ttatttcttt aaaaatgcac ctttaccgaa
    19201 gaattcgata acttgtggca ttacttgata aagtcgtgtt gcaatgttca ttacaaaagg
    19261 taaattgatt tcgcgacgct tagttcccat aatttgtact gttttacgcg caaccttttc
    19321 tggctttaac actaatttgc caactgtttc taaatagttt cctgatttat ccgctacatc
    19381 gaaaaagttt gtggcaatcg ggccaggatt aatcgttgta acatggattt tatctggcat
    19441 tagttctaaa cgaagtgcat tagaaaagcc taaaaccgca tatttcgtgg ctgaataaac
    19501 ggttgattta ggtgtagcga ttttagcggc ttgggaagca atattaataa tatgtccagc
    19561 tttgcgcgct tgcatttgcg gtaaaatcag ttgtgtgagt tgaattaagc caagtacatt
    19621 cgtatcaaac attttttcaa ttgtctcaaa tggaatatct accgcatttt caaataaacc
    19681 aaaacctgca cagttgacta acacatcaat ttgataggat gcatttatct ctgcgctgac
    19741 ttgtttcact tgctcaaaat cagtcatatc taaagtaaaa taagtcgctt ctactgaaaa
    19801 attatcatgt atatcttttt gtaattctat taattttttc gtacttctgg ctgttataat
    19861 aacattacca ccggacatag caacttgtct tgcgatttca gctccaagac cgttagaagc
    19921 tccggtaatt aaaaccgttt tattcttcaa aaaagggttc attttgtcac tctccaattg
    19981 gaaaaacagc taagtcataa gctatttcag tattttcaaa aatagttttt gcttctatta
    20041 atagttcttt acttgcatct cgatcatatc ttgagctgat atgggttaaa attaattttt
    20101 tgacattggc ggttttagca agattggctg cttgaagcgt tgtagaatgc atgtattctc
    20161 ctgccatttt tgctttatcg ccttcaaacg ttgcttcatg aaccaaaata tcggcattca
    20221 gtgctagttc tagttcgtta gcagtttctt ttgtatcacc aaaaatacta ataatcttcc
    20281 ctttttgcgg ctctccgata taatttttac catcaatgac gcgtccatca gctaatgtta
    20341 cgatttcgcc gtttttcagc ttttgaaaaa ccggtcccgc ttcgacgccg tccgctttta
    20401 atttttcagc attgagtgca ccttgtttat ctttttcgac aatacggtaa ccaaagctac
    20461 gtacgccatg atcaagatcg tcagctgtaa ctaaaaacat ttcatcttca aaaatcaaac
    20521 ctggctctat ttcttcaaaa ttaattttat atgtaagcct tgttccactg agtcttaagg
    20581 aagtttcgac atattctgct attccggcag gaccgtaaat agtcaaatta gagtcccctc
    20641 cttgaaaaga acgactactt aataagcctg gcagtccaaa aatgtgatct ccgtgcatgt
    20701 gagtaataaa gattttttct agtttactaa gtttaatttg gcttcgcatg atttggtgtt
    20761 gtgttgcctc tccgcaatca aatagccaaa ttgtatttcg ttcatttaac attgaaagtg
    20821 cgatggatgt gacattacgg cctcgcgacg gtacgcctgc tccagttcct agaaaaacaa
    20881 gttccataat ctgtttcatt cccttcccag ttcgtgtctt attttatcat attcttaaac
    20941 gaacaggaaa taaacatttc taagaaaaaa cccttataat tcagaaataa ctgtcaaatt
    21001 aaaaaaatat tcaaaccaaa cagttgcaca aatgcttctt tatggataaa atagtatgga
    21061 ctaatgagga aaattaatag ctcatttaat aaggcctttt tttgtggggt tcttttcaaa
    21121 ctaagaaatc tttttcttag cagttaattt ttgccattaa gagaataaga aagagggtaa
    21181 atgacgtatg acagatgagt tagaacaaaa agcactgatt actatttttg gcggtacggg
    21241 agatttggca aatcgcaaac tttacccttc gctatatcat ttgtacagta agggatctct
    21301 tggcgacaat tttgctgtta ttggaacggc tcgtcgtgaa tggagtaacg atttcttccg
    21361 tgataaagta aaagagtcta tcaaagacat tgacggttcc gaaaaagacg cggatgcatt
    21421 tgcttctcac ttctactatc aatctcatga tgtgacaaat aaagaatctt atgtaacttt
    21481 aaaagatttg tctgatgaat tagatgcaaa atacgaatta ggtggcaatc gcctcttcta
    21541 tcttgcaatg gcgccgaatt tctttggaac tatcgcaagt cgcattaaat ctgaaggatt
    21601 tgtagataca gatggctttc atcgtttaat tatcgaaaaa ccatttggtc acgatttagc
    21661 tagtgcagaa gaattaaata attcgcttcg tcaagcattt aaagaagatg aaatttatcg
    21721 tattgaccat tatttaggaa aagaaatgat ccaaaatatc tcggttattc gttttgcaaa
    21781 ttctatcatt gaatcgcttt ggaataatcg ttacatcgat aacatccaag ttactttaac
    21841 tgaggtgctt ggggttgaag atcgtgggcg ctattacgat gaaagtggcg cgcttcgaga
    21901 catggttcaa aaccatattc tccaaatcgt ttctctactt gcgatggagc caccaattaa
    21961 cttaacgaca cgcgagattc gtcatgaaaa agttcgcgcg cttcgttcct tacgcgtttt
    22021 tgaaggtaaa gaagttcacc aaaactttat tcgtggtcag tacggtcctg gtgaagtagg
    22081 tggcaaagaa ctcaaaggct atcgtcaaga agataatgtg gatcctcatt ccaatacgga
    22141 aacatttgtt gcagccaaac tagaaatcga taacttccgc tgggctggcg ttccatttta
    22201 tattcgcacg ggtaaacgtc ttgcgaagaa aacgacccaa attgcgattc agttcaaaga
    22261 tgtaccgctg aatttatttg gtcaacaaca atcgcttggt ggtaatgtgc ttgttattca
    22321 tatccaaccg gacgaaggta ttacacttca tttgaacgtc aaagaacctg gtcaaggtat
    22381 ggttacaatg ccagtcaact taaattatat tcattcctct ccagacggca tgaacacacc
    22441 tgaggcttac gaaaaattga ttctagactg tcttcgcggt gatgcgactt acttctctca
    22501 ctgggatgaa gtatcactat catggaactt tattgaccat atagcagatg tttggacaaa
    22561 tacgaaagat catttcccga actacaaatc cggttcgatg gggcctaaag aagcagatga
    22621 cctcattcaa cgcgacggat tccagtggtt cccaatcgat taatcaaaaa accagaaata
    22681 tggctaccct agcctatttc tggttttctt tgtttacttg caaaaacccc tatgcatgtt
    22741 agaatagaga ggaaaactaa ctagttaaag gagctcatat aatggctgaa aatattgatg
    22801 actacttaga aaaaggcatg tatggggcaa aagagattaa tcccgctgag aagaaaaaat
    22861 atttaggaac ttatcgcgaa cgtgttttag ttgcactcac aaaagaggaa gttttgaccc
    22921 aagagtatct tccagaacta gaaaaagcaa tactagaaaa cagtgactcc aagcttcttt
    22981 taaacggatt actccattat aattctttac gcccttatat taaactagca gaaaaatgta
    23041 aacatgaatt ttcgattgtt actcgtttag aaggtgaaac agatatttac ctcgtcctcg
    23101 cctgtcaaaa agcggtaaac aaggaagaca ttcatttata taaagaagca gaagtagaac
    23161 aagaagaaga acctgtctcg ttacttgaga aggttcgtaa actgtttaat taagtttacc
    23221 gcttactatt taggaggtcg atttatgcta cacattatca ctctgtcact cgctattttg
    23281 atggcgttac aaacgattta tttcttcatc cgtaaaaatg ttaatatggg cgttatgttt
    23341 ttgctcataa ctgctgcact tcttttactc agtacgattt aatggaattc ctgtttcgat
    23401 agcttgcttt aaatttcgct gcatgacacc aattcctgat gccccgtcaa gtgggaaatt
    23461 aaatacttgc ttaccatccg tgatgctcgt caataaccct ctgaactttt tgccgcctaa
    23521 catcggaatt ggttcggtag ggtttatttg tagtttctgc cactgctcct ttaattcctc
    23581 gagttgaatc gtatcagcac tagtcccttt catggtgaag cggacatcat atgtttttga
    23641 aataatatcg tccggtcgca aaaaaccata tttgggggat aatattaaat attcatttgc
    23701 aaactgttcc gcataggctc tacttaaacg atgaaatgtt ccagtataca cttcgcttgc
    23761 ttttactgga ccaatatctg gcgacttatc ccatattttt ggttttccag atgcaataat
    23821 aatcaggttc gttttattgg atattcccac atcatcactc ttccttgttt ctcttctgta
    23881 tctttttctt tgatatgtac gaaatggttg tgttttagta cttgtatgga tgccatgttc
    23941 tgctcgtagc ttctggcaaa tatgcgatga atggcgggct gttcttctag ccaagcaatc
    24001 atacctataa gcgcttctga catataacct ttattttgat aatctggtac gatgctgtag
    24061 ccaatttcga tttcgcccgt ttcgtccgga tttccttgtc caccaatttc gccgataatt
    24121 ttattttctt cttttaaaac gactaggcgt gtccatttaa tcattctatc gtcttttttc
    24181 acgttttcta atacatatgg taaataaaaa aagaaatcaa ttcctggcca gtcaggtgac
    24241 acatggtagc cacttgcttt ttccaaagct tctgtcccat taatcgttgc ctgaat
//
LOCUS       DASDYO010000029        24162 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.029, whole genome shotgun sequence.
ACCESSION   DASDYO010000029 DASDYO010000000
VERSION     DASDYO010000029.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 24162)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 24162)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..24162
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.029"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..104
                     /locus_tag="U0290_001009"
     CDS             <1..104
                     /locus_tag="U0290_001009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301055.1"
                     /translation="DFDTRFYFDASVDSAAMTVIGNIHENSEILEEQ"
     gene            231..623
                     /locus_tag="U0290_001010"
     CDS             231..623
                     /locus_tag="U0290_001010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301056.1"
                     /translation="MREIEYRAFVKETKKILPVTDLCFNETESVGVSGCGNPYCTMCV
                     DWYNFDDVLLMQYTEREDINNNKIFEKDIATCQFFDKKITGVIEFIEFMWAVIDHKNQ
                     RLYQLNEVSNIEVVGNVEENPELLEVSE"
     gene            620..805
                     /locus_tag="U0290_001011"
     CDS             620..805
                     /locus_tag="U0290_001011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727764.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301057.1"
                     /translation="MNDKKTDYKVYKITYKQRFMGEVIVDSYERTVKDDNELRSAINA
                     LYDDPHVFSVSSEEVAE"
     gene            802..1092
                     /locus_tag="U0290_001012"
     CDS             802..1092
                     /locus_tag="U0290_001012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003769971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301058.1"
                     /translation="MILYGVVTYDEATEWTTDLLTAKKWVENAKQVFCDGEVDEDYYV
                     KLIKLDVEAFLYDKYDKETDLSDQLHDEAETLKEYHLSLDDDGTYMVKEVAK"
     gene            1278..1472
                     /locus_tag="U0290_001013"
     CDS             1278..1472
                     /locus_tag="U0290_001013"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301059.1"
                     /translation="MTKQSRKNKEYVYELICSFWNNEKSLGIFKTRAAAERAMYDDID
                     DTPKQIYTDYYEIYKRPIYE"
     gene            1487..1714
                     /locus_tag="U0290_001014"
     CDS             1487..1714
                     /locus_tag="U0290_001014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3850 domain-containing protein"
                     /protein_id="HEM2301060.1"
                     /translation="MTKTHELKITPEFFAAVTEGRKTFEIRKNDRDFQVGDILILREW
                     NHEFSGFQIAVEVVYMTDYEQKDGFVVLGIV"
     gene            1726..2127
                     /locus_tag="U0290_001015"
     CDS             1726..2127
                     /locus_tag="U0290_001015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301061.1"
                     /translation="MTSTIKISEKDKVFQIATKSGWAVKVGMQVTIDGIDFAIYPFYA
                     KSNVFIQVSEVESGGVLINFPVDFIDVFVLDTRDKAIEYYKDNVIPLVQKKIEVNGLD
                     EFRKAIKNAKNYILENFGERPQIKKFEEANE"
     gene            2124..2606
                     /gene="ssb"
                     /locus_tag="U0290_001016"
     CDS             2124..2606
                     /gene="ssb"
                     /locus_tag="U0290_001016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM2301062.1"
                     /translation="MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRPFKNAQGEQ
                     EADFINCVVWRKPAENAANFLKKGSMAGVDGRVQTRNYEDSDGKRVFVTEVVAETVQF
                     LEPKNINAEGATSNNYQNQANYSNNNKTSSYRADTSQKSDSFADEGKAIDINEDDLPF
                     "
     gene            2627..2818
                     /locus_tag="U0290_001017"
     CDS             2627..2818
                     /locus_tag="U0290_001017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301063.1"
                     /translation="MTAETALENINNLSKRLASIRFMANAIAEVTNYQISEIEQMGDE
                     EIEAKYTAYVINEANEYAK"
     gene            2763..3167
                     /locus_tag="U0290_001018"
     CDS             2763..3167
                     /locus_tag="U0290_001018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1064 domain-containing protein"
                     /protein_id="HEM2301064.1"
                     /translation="MRRNIRRTSLTKQTSTRNKYNAKKVVIDNIKFDSKAEAAYYQQL
                     KLLKMTGEVVSFDLQPEFVLQESFRKNGKLYRAIKYKADFLVRYNDGHEELIDVKGML
                     TNEFILKRKLFEMRYMQSIKCVKLKGGEFLEV"
     gene            3171..3554
                     /locus_tag="U0290_001019"
     CDS             3171..3554
                     /locus_tag="U0290_001019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2481 family protein"
                     /protein_id="HEM2301065.1"
                     /translation="MAVMEMTKNKTRQREIISYIANNDVELNELLKLQKELNNLMKEN
                     TEEKQKTYWTKTFDRIVKKKKWAEITVREFADLRNAGLTCYAIAEHFKVSKSTVLNYT
                     QRNKKEYYQIFDMNEYQRNKEIWND"
     gene            3684..3848
                     /locus_tag="U0290_001020"
     CDS             3684..3848
                     /locus_tag="U0290_001020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301066.1"
                     /translation="MKIEKLNVFTRETICNGKDIEIANYNIELEAISEESFIDTAEKV
                     EKIREFIENL"
     gene            3867..4301
                     /locus_tag="U0290_001021"
     CDS             3867..4301
                     /locus_tag="U0290_001021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301067.1"
                     /translation="MGQLFNLPQVEDINYIQTVRAVRKFFKDYLMLRVMAGSRKLPTM
                     TTTYKLTPPNFSNEFHSKVEDAAIHNVDNVHAAQEAIKKYDAILNQLEHIHRKILFEK
                     FIHNLQDITIMLDIPYEERQYKREKRKAVIELATTLGIEVLN"
     gene            4665..5225
                     /locus_tag="U0290_001022"
     CDS             4665..5225
                     /locus_tag="U0290_001022"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301068.1"
                     /translation="MQTIISLAILGIVAFIGYWAKDLPGIYKAITVENKRKFNELDIQ
                     RESFFRQLRGDDLANTFGEWVSAYTDMDEFVEKAPTILKDMQKKVIMYGSPKTVSILA
                     MLSQHTYIGSGEEDVGKGTRFDNYKLMLYIANLIASLKFDFTGYKIDPMDIVRVRITD
                     YKENETQFKENQQKIETEIQKLGYEL"
     gene            5322..5507
                     /locus_tag="U0290_001023"
     CDS             5322..5507
                     /locus_tag="U0290_001023"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301069.1"
                     /translation="MESNKTLVIWFKNGKTAIFEQVENLDAAEKAIVFDYYGKSTETK
                     RSAAFFLANIAGFAESV"
     gene            5549..6091
                     /locus_tag="U0290_001024"
     CDS             5549..6091
                     /locus_tag="U0290_001024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase small subunit"
                     /protein_id="HEM2301070.1"
                     /translation="MKLTEKQKRFADEYIKCGNATEAARLAGYSSKTANRIATENLSK
                     PVIKGYIDKVLSELEEKRVMGYTEAMQLFTEIARGEMEEEVIVSNGDGFSVVTKSADI
                     NQRVSALKEIVKRHVAGGRDKLQEELIQAQIDKLRADTKQESNQGTTTIIMSNVDEMQ
                     AYLDKKAGGTDERDDTQTTS"
     gene            6060..7391
                     /locus_tag="U0290_001025"
     CDS             6060..7391
                     /locus_tag="U0290_001025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PBSX family phage terminase large subunit"
                     /protein_id="HEM2301071.1"
                     /translation="MNATIHKQLVDYQVINVTDMINPAFYDLWLSKHNHIIAKGGRSS
                     MKSSVISLKLVEKKMANPKSNMVCLRKVANTLYKSVYQQIKWALYEMGVADQFNFGKS
                     PMEIVHKTWGTGFYFSGCDDPAKLKSMKIPVGYVSDLWFEELAEFSGVTDIDVVEDTF
                     IREDLPDGQEVTTYMSFNPPRNPYEWVNEYVDTKRGDDDYLIHHTTYLDDEKGFLSKQ
                     IIKKIEKYKKNDLDYYRWMYLGEVIGLGDNVYNMNLFQPLKAIPADDRLILIDFAIDT
                     GHQVSATTYLSFGLTAKRNVILLNTYYYSPANQVVKKAPSEYSKELRDFMTKVVGNYN
                     TNVDMQTVDSAEGGLRNQYYKDYGVSLHPVAKGKKVDMIDFVCDLLAQGRFYYLDIPE
                     NQIFIEEHRKYQWDVKTINTDKPEVIKEDDHTCDAFQYYVKDNLRKLGLKF"
     gene            7404..8903
                     /locus_tag="U0290_001026"
     CDS             7404..8903
                     /locus_tag="U0290_001026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015967141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM2301072.1"
                     /translation="MINQIIASVKGVMRRMGLLKALKDVKDHKKVNANDEDYKYIDMW
                     KRLYQGHYAEWHNLNYEHNGNPVNRRQLSMNLPKVTAKYMSKLLFNEKVKINIDDKAA
                     EEFVLNVLKTNGFTKNMERYIEYGEAMGGFVIKVYHDGKKNVKVSFATADCMYPLSND
                     SENVDECVISNSFHKNDKYYTLLEWLEWKGEKVEVYTVTTELYQSDDPNELGTKVSLA
                     LLFDDIEPVAPLSKFTRPTFTYIKPNIANNKNLTSPLGISIYANALDTLKTLDLMFDS
                     YYQEFKLGKKKVLVPSSFVKTAVNLDGSTTNYFDSTDEAFFLYQGDQDADGKSVKDIS
                     VEIRSTEFIESINAMLRIYAMQVGLSAGTFTFDENGLKTATEVVSEKSETYQTKNSHS
                     QLIEQGIKEMIVSILEVGKFIEAYSGDIVELDTITVDFDDSIAQDEDTTINRYTNAKN
                     QGMIPLKIALQRAWNITEAEADEWAEMLAKEKQAEMPNNDMTGIFGEEE"
     gene            8909..10048
                     /locus_tag="U0290_001027"
     CDS             8909..10048
                     /locus_tag="U0290_001027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage minor capsid protein"
                     /protein_id="HEM2301073.1"
                     /translation="MALTPRQLDLFVQPVVDVYTTLENELFTLIVRRLKTKKNISADN
                     VLAWQIEKLNQVHALDQQMIERISKASGVSAKKLFSIVKDAGYSDLTQVDNYFSKLAE
                     TGAVLPLVSDGQTIVDKVMRSYFKLAQSNYNRVNQTMLSQARQIYSDIIHETTQSVLA
                     GLKTHRQALAETVTKFAENGVPALVDKANKRWTPEAYVRTVTRTTVNSVYNSVEDERM
                     NEYGVDLVRISQHVGARPTCSIVQGKVICLLSVEETKTKYGNKYMSIYSPELRYGYGD
                     GIFGCNCRHHRFAFVEGINIAPGENELIDEEENKRVYMLSQQQRLMERDIRAAKRKLS
                     AAEELGDELTVKKAKQAVRTKQSKLRAFVKTHNLTRQYSREKVYA"
     gene            10127..10717
                     /locus_tag="U0290_001028"
     CDS             10127..10717
                     /locus_tag="U0290_001028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage scaffolding protein"
                     /protein_id="HEM2301074.1"
                     /translation="MERDFLKELGLEKETIDSIMVEHGKSIQNEKDKVTSAEAERDGL
                     KSQLAQRDDDIEALKTDSGTSKSLKAQLETLQDNYETLKKDSEAKLVETRKGAALDLA
                     LANAKARNPKAVKALLDNDKLELTDEGLKGLDEQLGALQESDAYLFAQESEAVPKFGF
                     SGNPTAPAGFSGSLKENLKSDSFNLTKFLTEKGESE"
     gene            10717..11718
                     /locus_tag="U0290_001029"
     CDS             10717..11718
                     /locus_tag="U0290_001029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="coat protein"
                     /protein_id="HEM2301075.1"
                     /translation="MGNEITKLLDVVTPEVFNAYMDNFTSEKSAIIQSGIAVADPSVA
                     QNITAGGLLVNMPFWNDLDGEDETLGDGEKGLETGKITASADIAAVMYRGRGWSVNEL
                     AAVISGDDPLDALMGKIASWWMRREQTVLISVLNGLFAKNGALASSHLLSKPTSAISG
                     NLVLDAKQLLGDSSDRLSLMVMHSAVYTALQKQNLIAFIPNARGEVNIPTYLGYRVVV
                     DDGVPSTGTGAAKVYTSYLFATGSIGRNTGNPAKLTTFETARDASKGNDQVFTRRAFT
                     MHPYGVKFKNAVRDANEITPTNADLAKAGNWEKVYEDKQIGIVGIQHLVEELPASGA"
     gene            11737..12132
                     /locus_tag="U0290_001030"
     CDS             11737..12132
                     /locus_tag="U0290_001030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301076.1"
                     /translation="MPYTTLEFYTNEYAGEHLEQDEFDKLLKHAERKIDSVTFYRIRK
                     SGIESFSEFIQHQIQLATCNQIEYFKEAGGTSELAVSKPDNVSIGRTSISDSNFASTA
                     TSLNSGLIGSDVRSYLAHTGLLYNGVGVR"
     gene            12132..12494
                     /locus_tag="U0290_001031"
     CDS             12132..12494
                     /locus_tag="U0290_001031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM2301077.1"
                     /translation="MKVVKPITNAPPLPLDWLIHNISYEAYKEEDRHNQVVYEKGIEI
                     EHVRVDFSKSNQIAGLSDSDRYDAVIFIDAVNSMNVPADFISRSRIFFSGKAYKIVKV
                     IPCYATSENVHHWEIEVV"
     gene            12494..12832
                     /locus_tag="U0290_001032"
     CDS             12494..12832
                     /locus_tag="U0290_001032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM2301078.1"
                     /translation="MPIKVNIDLSKAKKNVKKAKEGAQFALINQAAADISLYVPFLEG
                     DLSNQYVIMNDKEIMWTSIYARRLYNGINFNFTLTHHPLAGPEWDQRAKVDKLESWIE
                     VAQKSVEEGL"
     gene            12832..13239
                     /locus_tag="U0290_001033"
     CDS             12832..13239
                     /locus_tag="U0290_001033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM2301079.1"
                     /translation="MSLDFLDSVMDAIENNVDLKDMKLRTAILKPESIALLLTPNNDK
                     QGYQDGSYERSFSFNLNGSSKQEMKVLGVLNAIAAYFDKTEIESIQSLNNSFVLEDKE
                     TTSVPNLVSASDDGTFIYSASFKIKLYIESEEK"
     gene            13242..13679
                     /locus_tag="U0290_001034"
     CDS             13242..13679
                     /locus_tag="U0290_001034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003722534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2301080.1"
                     /translation="MARIKNAKTKYFVAEIVDGAGEPVWKRLSKWITNVSDDGSDNTE
                     EQGDYDGDGNEKTVVLGYSEAYTFEGTHDREDEAQNLIVAKRRTPENRGIMFKIEIPD
                     TETAIGKATVSEIKGSAGGGDATEFPAFACRIAYDETPKVTKP"
     gene            13609..13941
                     /locus_tag="U0290_001035"
     CDS             13609..13941
                     /locus_tag="U0290_001035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Ig domain-containing protein"
                     /protein_id="HEM2301081.1"
                     /translation="MLRSSQRSLAVSLMTKHQKLQNPEESPSSVEVDKATITLKVGET
                     STITASVLPVGASQEVTFTSSNPPKAKVNASGVVEGVAEGTANITVASKGSPSINKVV
                     QVTVEAAD"
     gene            13994..14416
                     /locus_tag="U0290_001036"
     CDS             13994..14416
                     /locus_tag="U0290_001036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail assembly chaperone"
                     /protein_id="HEM2301082.1"
                     /translation="MTQNNVINIQLEESYQEFQLGTELFRVGLGDEMRRKWIEADEKY
                     KKKLEKLNKYNIDNTDEMSSEEYFTLEEDVKEALTEAYAILLDDEKAFDKCYAQCKDI
                     LKMYQVYNQVAEIIVGSVEKQQNEIQKKYKAKMTKKAK"
     gene            14422..15027
                     /locus_tag="U0290_001037"
     CDS             14422..15027
                     /locus_tag="U0290_001037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacteriophage Gp15 family protein"
                     /protein_id="HEM2301083.1"
                     /translation="MLSLAFGVNDIYEYEGKEYKLDLAFDNVLRVIDLTEDNSLSDVF
                     RANLAIDVLFADDMPWPRSNEEDKYANIEEKSLVLIDIFTNYIVKENDDGLLYDIDGN
                     KMPSATNNNDEAEEIASYSLTQDADYIYASFLQDYNIDLLDSRGKMHWYKFRALLESL
                     RDDTTIKTIIGIRQAELPSGKGTEKERNELIKLKNRYKLKD"
     gene            15038..20404
                     /locus_tag="U0290_001038"
     CDS             15038..20404
                     /locus_tag="U0290_001038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tape measure protein"
                     /protein_id="HEM2301084.1"
                     /translation="MSDGSVVIEISLDDKKADKQLDAFEKDLEKAGTNAGAALDKAYR
                     EAVSDIASQSKRLKDTFVNAFKSMGSAGSNALKASLNFMRELPSNVQAALSKLASTVK
                     TGFVNAAKASITVIKELGTSIKNTAVNIKNGFFSIAKTVQSSIVSAVKVSINVIKSIP
                     SAIKSAGISIKSALVSSLQAAKSAAISFAQTTVKVIKSIPVAAKTAATAVKNSFVVAY
                     KAVVVAAYMSVKGTISAVKAIPSATKSAALAVSSAMKTAFSAVASAAKTTGTTVKSAL
                     KTGFSAVKSGAKAAGQAGISALKGLGNIAKSTGSLIKSGLVSGFNAAKAAAKGAGAGM
                     REALKNSVEKPAEQARFSLLKLAAALGLIAATKNVVGSAIGRVDTIDTATKSLTVLTG
                     SAKDAQLVMTDLTAAIDGTPIALDAVALGAKKMVAAGMKAANVKPVFTAIADAAYGVG
                     NGSESIDQMTDAISALQASGVAYADDINRLVDAGVPAWQILANSTGKSVGEMKKYVSE
                     GSLESTKAIAMLTKGIEEGTTGMAGNTAKMAGLAKTAGNTISGSFANMKTAAVKSLAN
                     IAENLKGPIIQALDVAKNAFKQFAAVTASPEFQKKLSDLIQKIKEFIPVLIEWAPLLA
                     KVAAGFVAFNIISSVFSKVAKLAGAIKSLTSSGSLLSVVVNTIKGSFVKLAGTLGSTT
                     AAFGVVAAAVGAVIAVIYGMYTAFKENTAGIKSFLSGMWEAVKNSFGKIIDVFKQIVS
                     ALKPVGSGFKDILKYIGVGAWIVLGFALAAVVDIIQVLARIVLVAIKALQGLYYAIKA
                     AFQALHWDLKGAKKSLEQSKDAFVEAGSAIKDAFNKDNYALTGTVEAFKQMGGEAEKT
                     AKKTETSGKKIKETLKLVETTAKQTETTVSKSNQAIDTMLNGGVDQYGKKLSEKTESF
                     LNAAKDLYEQYQEATKKSQDKYSVAMEKAQSLEGDKRKKAIADANKTLVDETTKNNST
                     LLTLQSDYSNMLKTNRWADGQELTAQQKKFLQQQTTDIQTELAKQNQLYVEANLLRLE
                     QGKSLNEKERNTSLEVQKSLYEEKKKAVETGEKSLADLKKKKADASTETEKANYQIQI
                     DEQTKKNKTLSTNLKNWATEMNAIIANGGTLNAETFANGLSQLGNISDEQLSALWQNF
                     VSTSTSIDNTLSGLAAIMGQRGGEGVQAFVTALQSGDYTTAALNINNDVMNTLSTLPN
                     GMFQNGQSGKDQFITAIKSGDFQGAGKFLLDGVKLGASPLPGEMNNIGKQGGNANADG
                     LKSTAEANKSAGAELKNNAKNGAFDPNLFKMTGSNNASGFNSGILDGKGNAFSAGTGI
                     GNSAKSGAGSVDSSGVGSDFASGYVNGILSGMGAVGEAAGSLANKALQAVKDAQKSKS
                     PSKKAKKLGGDFGSGYSLGIASKTKAVNKAASNLVAGALGTESQIKKLSSTLKDKISS
                     AIDAGLHSKNKSRGQLKQAKALNSIEGYIVQQTNRLAATAKKRDKVVAQLKAANTKMA
                     DLTKQSKEYAASITEKMQSYGSISNVDAENPQSIQAEMQKRLKEIKAFQANVEKLRKK
                     GVSKDIISDILESGVENGSSYAQALAKSDAKTIKAINSTQNQINSASKSMGNTAANAM
                     YSAGINAAKGLINGLNSQKKQLENTAKSIANTITNSVKKALRIHSPSRVAIELGKFFT
                     DGLGNGVLAGAKGAVQSTNKMVDKVVNAASNLTVPAITLPKISAEKALGLKSVDLNRT
                     ITVKTIIDNKTKESSNADLIKAIKESGAKPVILNLDGEVLANNSNNRIGSMTDLGLYG
                     GGLL"
     gene            20401..21228
                     /locus_tag="U0290_001039"
     CDS             20401..21228
                     /locus_tag="U0290_001039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012582412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HEM2301085.1"
                     /translation="MNKKTDLYLMQANKIIKLNEKHNFEISEVSRASPQIINNYTSYE
                     FSDGNRSSDSNFDSFDIEFTCRFKTNGNIDYHVRLDELFEDIFIRKEYYIFHTKTPGK
                     KYCVHPAPFDIDRKGAGHAQFTLRFEVFKGFSESLGTSLSPFAFSEGIWQAGQGIVSQ
                     NYKYKHTSNRFIVYNAGSFDIDPRMHDLRITIKNCRSDGLLTINNKSTGEKFVFNEKI
                     YAYDTIELDGSNILKNGVRCGRKTNLGLISLLSGGNEIEIENVSNIETTWDFPFLYK"
     gene            21243..22265
                     /locus_tag="U0290_001040"
     CDS             21243..22265
                     /locus_tag="U0290_001040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012582413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2301086.1"
                     /translation="MDIFVSDYEKQYKEILTGFDPTTFSETWVENQQWQLDFYVEKTR
                     NNQDVFDLLNHESSVYLDGQEFVVKQLKRGAVGKIVYSEVTATHIYFTMQDDYQYNAI
                     SGSKSAKDCLTHIFAADKQGFSFELIDKNKVLENITQENFGNGNLLKLVQEVLEDYKL
                     VMLADNKRLTFIPSEDYGEHTENEIRYNKHTNEVDFDIDTLSLRTQIKGYGKVDSNGN
                     NYFPPVTFTSPESAKWGVRIQEPLSDERYTTSSSMLRRLKLELQDYPATTGNISLKLK
                     YECGKGDYVMFVYEPLGLLYEVQIVAYKKYIFTNKPPELTLSNNKKTMVSIMVQLAKA
                     IKRGAK"
     gene            22266..23291
                     /locus_tag="U0290_001041"
     CDS             22266..23291
                     /locus_tag="U0290_001041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743413.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301087.1"
                     /translation="MDLKKWQDPLMNSELQQNYNDNLVKLAGSLEKANQDMTHVNQRI
                     SNLVIKSGGNESNEVVDARVSSLVPETEFTTLNDRINYAENALITGVGKLSTNVFDLM
                     DKYNDIDTILKRLYGLDSSNIEIFVDDARGDDIAGTGEIDAPFKTINKAVMTLPRVLN
                     SNSVNIWIVPGRYNEDVVIPPIMGGDIYIRSTNFETVDPTSSTGCQVRSISATGSNGY
                     LYIAGLEETNTAGTTKNYFIKATRCGFVRITKCRMAFNTKAIDPFTAVFIDACSADVN
                     GCYFASQNVDVRGYNTARVEVQNIVHGAKSAIGLYPQSADIFNLNSGTWEADTPTKLS
                     GGGVVRT"
     gene            23288..>24162
                     /locus_tag="U0290_001042"
     CDS             23288..>24162
                     /locus_tag="U0290_001042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BppU family phage baseplate upper protein"
                     /protein_id="HEM2301088.1"
                     /translation="MTENVIHKNGVYDFNVTTQEDKPLQKSVFYTQDSGGTARLIFNI
                     DKDNQDLVLSSAAELELAMILAKGTESESKYLVKPTIIDGVRGIAEYSLTDSQIAHAG
                     NAIAELYIKYKNSQAMRVYKFSFEIKKALIDSDFFPVSEFYVERWDDYEKIFDESFER
                     LNTKLDDVDKKADDLKTQFDDMQPSQFAQKTDLNAHVNNADIHVTAADKTNWNSKETA
                     SSAQAKADKALADAKTFFELASAVQSVTLTPKNGFVASQPLVARYIKFGNRFLVIVSG
                     IVGKGTGNGTGICAT"
BASE COUNT         8610 a         3871 c         5285 g         6396 t
ORIGIN      
        1 aagatttcga tacaagattc tacttcgatg ctagcgttga ttcagcagct atgacagtga
       61 taggcaacat acacgaaaat tcggaaatat tggaggaaca gtaaatgacg ttaagagaag
      121 cattagagaa gcacacaaga tatatcttgt tttgtggcat gtgcgagtgt ggacttgtat
      181 ggactatctg aatttaaatt caaaaataag ccgaaggaag ggacgatagc atgagagaga
      241 ttgaatatag agcgtttgta aaagaaacta agaaaatact tccagtcaca gatttgtgtt
      301 ttaacgaaac agagtctgta ggcgtaagtg gttgcggcaa cccatattgt acaatgtgcg
      361 tcgactggta caactttgac gatgtcctgc tgatgcaata cacagaaaga gaagacatca
      421 acaacaataa aatatttgaa aaggacattg caacttgtca gtttttcgac aaaaaaatca
      481 ctggtgttat cgagtttatc gaatttatgt gggcagtaat tgatcacaag aatcaacgac
      541 tatatcagtt gaacgaagtt agcaatattg aagttgttgg aaatgtggaa gaaaacccgg
      601 aattgttgga ggtgtcggaa tgaacgataa aaaaacagat tataaagtat ataaaataac
      661 atacaagcaa cgtttcatgg gggaagttat tgttgattca tatgaaagaa cggtaaaaga
      721 tgataacgaa ttacggtctg caattaacgc tttatatgac gacccacatg tgttttcagt
      781 tagtagtgaa gaggtggcgg aatgatttta tatggggtag taacatatga cgaagcaaca
      841 gagtggacaa cggatttgct aacagccaaa aaatgggtag aaaatgctaa gcaagttttc
      901 tgcgatggag aagttgatga agattattat gttaagttaa taaaattaga cgtagaagca
      961 ttcttatacg ataaatatga caaagaaaca gatttgagtg atcagttaca cgatgaagct
     1021 gaaacattga aagagtatca tttgagttta gatgatgacg gaacttacat ggtgaaagag
     1081 gtggcgaaat aatgtgtgag tattgtaaga atgactctat gatgaataac gagcctttac
     1141 taagttttga tgaagagtat aaagaacctg gtgttgttag actagatagc actggcaact
     1201 taggagtttt cagctactac ggtttaacag ctaggaatat caattactgt ccaatgtgcg
     1261 gaaggagttt ggaataaatg actaaacaaa gccggaaaaa taaagaatac gtctatgagt
     1321 tgatatgtag tttttggaac aatgagaagt cgctaggtat attcaaaaca agagcagcag
     1381 cggaaagggc tatgtatgac gatatagacg acacgccgaa gcagatttat acagattatt
     1441 acgaaatata taaacgacca atatacgagt gaaaggaagc gtctaaatga ctaaaacaca
     1501 cgaattaaaa ataacacccg aattttttgc agctgtgacg gaaggacgaa aaacgttcga
     1561 aattagaaag aatgaccgcg atttccaagt aggagatatt ttgattttac gcgaatggaa
     1621 ccatgaattt tcaggctttc agatcgctgt tgaagtagtt tacatgacgg attatgagca
     1681 aaaagacgga tttgtcgtct tagggattgt atagggggag aacaaatgac tagcacaata
     1741 aaaatatctg aaaaagataa agtgttccag attgcgacga aaagtggatg ggctgtgaag
     1801 gtggggatgc aagtgacgat agatgggata gactttgcaa tttatccgtt ctatgcaaaa
     1861 agcaatgttt ttatacaagt tagtgaagtt gaaagtggcg gagtattaat taattttcca
     1921 gtcgatttta tagacgtttt tgttttagac actcgagata aagcaatcga atattataaa
     1981 gataatgtga ttcctttagt tcagaaaaaa atcgaagtaa atggattaga tgaatttaga
     2041 aaagcaatta aaaacgcgaa aaattatata cttgaaaatt tcggagaacg accacaaatt
     2101 aaaaaatttg aggaggcaaa cgaatgatga accgtgtagt gcttgtagga cgattaacga
     2161 aagaccctga attacgttac actccagctg gagtagctgt tgcgactttt acgctagcag
     2221 taaatcgccc atttaaaaat gcacaaggag aacaagaagc cgatttcatt aattgtgttg
     2281 tttggcgtaa accagcggaa aacgcagcta atttcttgaa aaaaggaagc atggcaggcg
     2341 ttgatggacg tgttcaaact cgtaattatg aggacagcga cggtaaacgc gttttcgtta
     2401 ctgaggtagt tgctgaaaca gttcaattct tagagcctaa aaatatcaac gcagaaggcg
     2461 ctacatcgaa taattatcaa aaccaagcta attattcaaa taacaataaa acaagctcat
     2521 atcgagcaga tacgagtcag aagagtgatt catttgcaga cgaaggcaag gcgattgata
     2581 ttaatgaaga tgatttgcca ttttgagcga aagggtgaat aaaaaaatga cagcagaaac
     2641 agcgctagaa aatattaata atctgagtaa aagattagcg agcatcagat ttatggctaa
     2701 tgcgattgca gaagtcacaa actaccaaat tagcgaaatt gaacaaatgg gggacgaaga
     2761 aattgaggcg aaatatacgg cgtacgtcat taacgaagca aacgagtacg cgaaataaat
     2821 acaatgcgaa gaaagttgtt attgacaata taaagttcga tagcaaagcg gaagcagcat
     2881 attatcagca attgaaacta ttaaaaatga ctggtgaagt agttagtttc gatttacagc
     2941 cagagtttgt gttacaagaa agctttcgaa aaaacggaaa actgtatcga gctattaaat
     3001 ataaagctga ttttctcgta cgatacaatg atgggcatga ggagttaatc gacgtcaaag
     3061 gcatgttaac aaacgagttt atactcaaac gaaaactatt tgaaatgcgt tatatgcaat
     3121 caattaagtg tgtgaaatta aaaggcgggg aatttttgga ggtgtgataa atggcagtaa
     3181 tggagatgac aaagaacaaa acaaggcagc gggaaattat tagttatata gcaaataacg
     3241 atgtagaact aaacgaatta ctaaagttgc aaaaagagtt aaacaatctg atgaaagaaa
     3301 atacagaaga aaagcaaaaa acttattgga caaaaacgtt tgatcgcatc gtgaaaaaga
     3361 aaaaatgggc ggaaattaca gttcgtgaat tcgctgattt acgtaacgca ggactaacat
     3421 gttacgcaat tgcagagcat ttcaaagtgt cgaagtcaac agttttaaat tatacgcaaa
     3481 gaaataaaaa agaatactat caaatttttg acatgaacga atatcaacgg aataaggaga
     3541 tatggaatga ttgataaagt agcgaaattt ataggagctt tgactattta cgctttatgg
     3601 gtcctagtat taatttttgt actaggatta gcagttaaag ggattctatg ggcttggagc
     3661 aatatgtttt aggaggattt taaatgaaaa ttgaaaagtt aaatgtattt accagagaaa
     3721 caatttgtaa tggaaaggac atagaaatag ctaattataa tattgaatta gaagcaatta
     3781 gtgaagaatc ttttattgat acagctgaaa aggttgagaa aataagggag tttatcgaaa
     3841 atttataaag tgatgggggc gactttatgg gacaattatt caatctacca caagttgaag
     3901 atattaacta cattcagaca gtcagagcag taagaaagtt ctttaaagac tatttaatgc
     3961 tgcgtgtgat ggcaggaagt cgtaaattgc cgacaatgac aacaacatac aaattaacgc
     4021 caccgaattt cagtaatgaa tttcattcaa aagtagaaga tgctgcaatt cataatgtcg
     4081 ataacgttca tgcagcacaa gaagcaataa aaaaatatga tgctattttg aatcaacttg
     4141 agcacattca tagaaagata ctgtttgaga agttcattca taacttacaa gatataacta
     4201 ttatgcttga tattccttat gaagaaaggc aatacaaaag agagaaacgg aaggctgtta
     4261 ttgaattagc aacaacactt gggattgaag tgctaaattg aaatggcact ttttgggcac
     4321 tttttgagca aaaaaaggtg ataaaatgtt attagtgaga agtgaagatg attacaaaaa
     4381 taaaatctta tattgagtct gcgctccact tctcatttat aatcttatga tgatatagca
     4441 ggagattgct atgttgcctg gcagaggctt tgtatctggc cattagtctc aacagatgac
     4501 gacacttctg ttcaatctca tatcctatcc acactggatg taaaacacgc atgtggcgct
     4561 gactggtgcg ttaaccagtt ttaaaaatta taatcctttc catctgttaa taattgagca
     4621 ggtggttttt atttggtata gtgaagataa aagggtggat tatgatgcaa acaattatct
     4681 ctttagcaat tttaggaata gtagctttta ttggatactg ggctaaggac cttccgggga
     4741 tatacaaagc tataactgta gaaaataaga ggaaatttaa tgaattggat attcaacgag
     4801 agtctttttt tagacaactc agaggggatg acctggcaaa tacgtttggg gaatgggtgt
     4861 ctgcgtatac tgacatggat gaattcgttg aaaaagcacc tacaattctt aaagatatgc
     4921 aaaaaaaggt cattatgtat ggttcgccta aaactgtatc tattttagca atgttatctc
     4981 aacacacata tattggtagc ggagaagaag atgttgggaa aggtacgaga tttgataatt
     5041 ataagctaat gttatatata gctaatttaa tagcctctct aaaatttgat tttacaggat
     5101 ataaaattga tcccatggat attgttcgtg tgagaatcac tgattataaa gaaaatgaaa
     5161 cacaatttaa agaaaatcaa caaaagattg aaacagaaat ccaaaaactt ggatatgaat
     5221 tatgagttta tttgaaataa gacatttagt tcgaagttaa tatattaaca gtcccgatta
     5281 ttcggggctt ttttgataca taaaaataag gagtgatgaa aatggaaagc aataaaacat
     5341 tagttatttg gttcaaaaat ggaaaaacag ctatttttga gcaagtggaa aatcttgatg
     5401 ctgccgaaaa agctattgta tttgattatt acggtaaatc taccgaaaca aaaagaagcg
     5461 ccgctttttt tctagctaat attgctggct ttgcagagtc ggtataagaa aagtatttta
     5521 ttaaaataaa gggagttggt gatatgtagt gaaactaacc gaaaaacaaa aacgatttgc
     5581 agatgaatat ataaaatgcg gtaatgctac agaagccgct cgtcttgctg gttatagttc
     5641 gaaaacggct aatcgtatag cgaccgaaaa cttgtcaaaa ccagttataa aaggctatat
     5701 agacaaggtt ttaagtgaac tcgaagaaaa gcgcgttatg ggctatacgg aagccatgca
     5761 attattcacc gaaatagctc gaggtgaaat ggaagaagaa gtaattgttt cgaatggtga
     5821 tggcttttcc gtcgttacaa agagtgctga catcaaccaa cgagtatcag cattaaaaga
     5881 gattgttaag cgtcatgtag caggcggtag agacaaatta caagaagagc ttattcaagc
     5941 gcaaatcgat aagttaagag cagatacgaa gcaagaaagc aatcaaggaa caacaacaat
     6001 tatcatgtcg aacgttgacg aaatgcaagc ctaccttgat aaaaaggcag gtggcaccga
     6061 tgaacgcgac gatacacaaa caactagttg attatcaggt tatcaatgta actgatatga
     6121 ttaatcctgc tttttatgac ttgtggctat ctaaacataa tcacatcata gcaaaaggcg
     6181 gacgttcttc tatgaagtcg tctgttatta gtttgaagct cgtagaaaag aaaatggcta
     6241 atccgaaatc taacatggtg tgcctacgta aagtagctaa tacgctttat aagtcagtct
     6301 atcagcagat taaatgggcg ctttatgaaa tgggtgttgc tgaccaattc aattttggta
     6361 aatctccaat ggaaatcgtt cataaaactt gggggacagg cttctacttc tctggttgtg
     6421 atgatcccgc taaactaaaa tcaatgaaaa ttccagtcgg ttatgttagc gatttgtggt
     6481 ttgaggaatt agcggagttc tctggcgtga ctgatattga tgttgtagaa gacacattca
     6541 ttcgtgaaga tttgccggat ggtcaagaag ttacaacata catgtcattt aacccgcctc
     6601 gcaatcctta cgaatgggtg aatgaatatg tagacactaa acgtggtgac gatgattatt
     6661 taatacatca cactacttat ttggatgatg aaaaaggctt tttatccaag caaatcatta
     6721 agaaaattga gaagtacaaa aagaatgacc tcgattatta ccgctggatg tatctaggag
     6781 aggtaattgg tcttggtgat aatgtttata acatgaacct gtttcagccg cttaaagcta
     6841 ttcctgcgga tgacaggctt attttaattg atttcgctat tgatacagga catcaagtgt
     6901 cagctacaac atatctaagt ttcggtctca ctgcaaaaag aaatgttatt ttgctaaaca
     6961 catactatta tagtcctgct aatcaagttg ttaaaaaagc gcctagcgag tattcaaagg
     7021 agttgcggga ttttatgact aaagtagttg gaaactacaa tacaaatgtt gatatgcaaa
     7081 cagtagatag cgcagaggga gggcttcgca atcaatatta taaagattat ggcgttagct
     7141 tacaccccgt cgcaaaaggt aaaaaagtgg atatgattga ctttgtgtgt gatttgttgg
     7201 cacaaggtcg tttttattat cttgatattc cagaaaatca aatattcatc gaggaacata
     7261 gaaagtatca atgggatgtt aaaacaatca acacagacaa gcccgaagtc atcaaagaag
     7321 atgatcatac gtgtgatgct tttcagtact atgtaaaaga caatctaagg aagttaggtc
     7381 tcaaattcta ggaggtgaaa accttgatta atcaaataat cgcaagcgtg aaaggagtga
     7441 tgcggagaat gggactattg aaagcactga aagatgtaaa agaccataaa aaagtaaatg
     7501 ctaatgatga agattataag tatattgaca tgtggaaacg gctatatcaa ggccattacg
     7561 ctgaatggca taatctaaat tacgaacaca atggcaatcc ggttaacaga cgtcaattat
     7621 ctatgaattt gccgaaagtt acagctaagt acatgtctaa acttcttttt aatgagaaag
     7681 tgaaaatcaa tattgatgat aaagccgctg aggaattcgt gcttaatgta ttgaaaacga
     7741 acggttttac taaaaatatg gagcgttaca tcgaatacgg cgaagcgatg ggcggttttg
     7801 taataaaagt gtatcacgac ggaaaaaaga acgtcaaagt ttcattcgcg acagccgatt
     7861 gtatgtatcc tttgtcaaat gatagcgaga atgtagacga atgtgttata tctaatagtt
     7921 ttcataaaaa cgataaatat tatacgttgc tcgaatggct cgaatggaaa ggggagaaag
     7981 tagaagtata cacagtcaca acggagttat accaatcaga cgacccgaac gagcttggta
     8041 caaaagtaag tttagcgtta ctgtttgatg atattgagcc tgttgcgcca ttgtcaaagt
     8101 ttacacgtcc gacatttact tatatcaaac ctaacattgc gaataacaag aatctaacga
     8161 gcccgctcgg catttccatt tatgctaatg cattagacac attaaaaacg cttgatttga
     8221 tgttcgattc atactatcaa gagtttaaac ttggcaaaaa gaaagtattg gtgccttcga
     8281 gcttcgttaa aacggctgtt aacctagacg gctcaaccac gaattatttc gattcaactg
     8341 atgaagcatt ctttttatat caaggtgacc aggatgcaga tggtaaatca gtaaaagata
     8401 tatctgtaga gattcgttca acggagttta tcgagtctat aaacgcaatg ctacgcattt
     8461 atgcgatgca agttggatta tctgctggca cattcacttt cgatgaaaac ggcttaaaaa
     8521 cagctacaga agttgtaagc gagaagtcag aaacctatca aactaaaaac agtcattcgc
     8581 aattaattga acaaggcata aaagaaatga ttgtgagcat tcttgaggtc gggaaattta
     8641 tcgaagctta tagcggcgat atagttgagt tagacacgat tacagtcgat tttgacgact
     8701 ctatagcgca agacgaagat acaactatca atcgttacac aaacgctaaa aatcaaggta
     8761 tgattccgct aaaaattgct ttacaacgtg cttggaatat tactgaagct gaggctgatg
     8821 agtgggctga aatgttagcg aaggaaaaac aagcggaaat gcctaacaac gatatgactg
     8881 ggatattcgg cgaagaggag tgatatagat ggcactaact ccaagacaac tcgacttgtt
     8941 tgtgcaacct gttgttgatg tttacacaac gctcgaaaat gaattgttca ctcttattgt
     9001 tcgccgattg aaaacaaaga aaaatatcag cgcagataat gtgcttgctt ggcaaataga
     9061 aaaacttaat caagttcatg cactagatca gcaaatgatt gaacgaattt ccaaagcttc
     9121 cggcgtttca gctaagaagc ttttttctat tgttaaagat gcgggataca gcgatttaac
     9181 acaagtagat aactatttca gtaaattagc tgaaacaggc gctgtgttgc cactagtaag
     9241 cgatgggcaa acgatagtcg ataaagtaat gagaagttat tttaagttag cacaaagcaa
     9301 ctataatcgc gtcaatcaaa cgatgttatc gcaagcaaga caaatctatt cagatatcat
     9361 tcacgaaacg acacagagcg tcttagctgg tttaaaaaca catagacaag cattagcgga
     9421 aacagtaact aaattcgctg aaaatggcgt tcctgcgctt gtagataagg ctaataaaag
     9481 atggacacca gaggcttacg tccgaaccgt tacaagaaca accgtcaaca gcgtttataa
     9541 cagcgttgaa gatgagcgaa tgaatgaata tggcgttgat ttagtgcgta tttcgcaaca
     9601 tgtaggagct agaccaacgt gttcaattgt tcaaggcaaa gtcatctgtt tgttatctgt
     9661 tgaagaaaca aaaacgaaat acggcaataa atacatgtct atttactcgc cagagcttag
     9721 atatggttat ggagatggga ttttcggttg taattgccgt caccatcgtt ttgctttcgt
     9781 tgaaggcatt aacattgcac caggcgagaa cgagttaata gacgaagaag aaaacaaacg
     9841 cgtttatatg ttgagtcagc aacaacgatt gatggaacgc gacataagag cagctaaacg
     9901 caagctgtca gctgccgaag aattaggcga tgaactaaca gttaaaaagg ctaaacaagc
     9961 tgttagaacg aagcaaagca agctaagagc atttgtaaaa acgcacaatt taacaagaca
    10021 gtatagcaga gaaaaagtat atgcctaaca ttcgacctga acgaaagtcg ttaaaagtcg
    10081 gctctcgtga tcgtatcacg taaaaacaac gtaggaggaa taagaaatgg aaagagactt
    10141 tttgaaggaa ttaggcttgg aaaaggaaac tatcgactct attatggtcg aacatggtaa
    10201 gtcgattcag aacgaaaagg acaaggtaac atcagcggaa gcagaaagag acgggcttaa
    10261 aagccagctt gcgcaacggg acgatgatat cgaagcttta aaaactgatt ccggaacgag
    10321 caaatcttta aaagctcaat tggaaacact gcaagacaat tacgaaactt tgaaaaaaga
    10381 ttcggaagct aaattagtag aaactcgcaa aggtgcagca cttgatttag ctttagcaaa
    10441 tgcgaaagca agaaatccga aggctgtaaa agctttactg gataacgaca aactagaact
    10501 gacagatgaa ggactgaaag gccttgacga acagctagga gcattgcaag aaagcgatgc
    10561 ttatttgttt gctcaagaaa gcgaggcggt tccgaaattt ggattcagtg gcaatccaac
    10621 agctccggct ggtttcagcg gttcgttgaa ggaaaattta aaatcagatt catttaattt
    10681 aacaaaattt ttaacggaaa aaggagagag tgaataatgg gaaatgaaat cacaaaatta
    10741 ttagacgtag taacaccaga ggtttttaat gcgtacatgg ataacttcac atctgaaaaa
    10801 tcagcaatta tccaatcggg aattgcagtg gctgatccaa gcgttgcgca aaatattaca
    10861 gcgggcgggt tacttgttaa tatgccgttt tggaacgatt tagacggcga agacgaaact
    10921 ttaggtgacg gtgaaaaagg gctagaaaca ggtaaaatta ctgctagcgc tgacattgct
    10981 gcggtaatgt atcgtgggcg cggatggtca gtcaacgaac ttgcggcggt tatttcggga
    11041 gacgaccctt tagacgcttt aatggggaaa atcgcttctt ggtggatgcg tcgtgagcaa
    11101 actgtactaa tttccgtgtt aaatggactg tttgctaaaa acggtgcatt ggcaagttcc
    11161 cacttgctat caaaaccaac atctgcaatt tcggggaatt tagtattaga tgcaaaacag
    11221 cttcttggag attcttcgga tcgtttaagc ttaatggtta tgcattcagc ggtttataca
    11281 gccttgcaaa aacaaaactt aattgcattt attccaaatg ctcgtgggga agtcaatatc
    11341 ccaacttatt taggatatcg tgtagttgta gacgacggag tgccttccac aggaacagga
    11401 gcagcaaaag tatacacttc atatttattt gcaacaggtt ccatcggaag aaacacaggg
    11461 aacccagcta agttaacaac atttgaaaca gctcgggatg cctctaaagg taatgaccaa
    11521 gtgtttactc gacgtgcttt cacaatgcac ccatatggag ttaaatttaa aaatgcagtt
    11581 cgtgatgcta acgaaatcac tccaacaaat gcggacctag caaaagctgg aaattgggaa
    11641 aaagtttacg aagacaaaca aatcggtatt gttggtattc agcatctagt tgaagaatta
    11701 ccagctagcg gagcatgata aaagggggcg aatattatgc cttacacgac actagaattt
    11761 tatactaacg agtatgcggg ggagcatttg gaacaggatg aatttgacaa actgttaaag
    11821 catgctgaaa gaaaaattga ttcagtgaca ttttaccgaa tacgcaaaag cgggattgaa
    11881 tcgtttagcg aatttattca gcatcaaata cagttagcta cttgtaatca aatcgagtat
    11941 ttcaaagagg cgggcggaac aagtgagtta gctgtttcta agccggataa cgtatcaatc
    12001 ggaagaactt ctattagtga tagtaatttt gcatcaactg ctacatcact taatagcgga
    12061 ttgattggta gcgatgtaag gtcctattta gcgcatacag gtcttcttta caacggggta
    12121 ggtgttcgtt aatgaaagta gtaaaaccga taacaaatgc ccctccgttg cctcttgact
    12181 ggctaattca taacattagt tatgaagcgt ataaagaaga agatagacat aatcaagtcg
    12241 tttatgaaaa aggcattgag attgaacatg ttcgtgttga tttctcaaaa tcaaatcaaa
    12301 tcgcgggatt atccgatagt gatagatatg acgcggttat ctttattgat gcagtgaaca
    12361 gcatgaacgt gccagctgat tttataagta gatcgagaat ttttttctct ggaaaagctt
    12421 ataagattgt caaagttata ccttgttatg cgacctctga aaatgtgcac cattgggaga
    12481 tagaggtggt ttgatgccga ttaaagttaa tattgacctt tcaaaagcca aaaagaatgt
    12541 aaaaaaagcc aaggaaggcg cacaattcgc tttaattaat caagccgctg ccgatatttc
    12601 tttgtatgtc ccctttttgg agggtgattt atcaaatcaa tacgttatta tgaacgacaa
    12661 agaaataatg tggacatcta tttatgcacg gagactctac aacggaataa acttcaattt
    12721 cacactcaca catcatccgt tagctggccc ggaatgggac caacgggcaa aagtagataa
    12781 gttagaaagt tggatagaag tagcgcaaaa atcggttgag gagggactat aatgtcatta
    12841 gattttttag atagtgttat ggatgctatc gaaaacaacg tcgatttaaa agatatgaaa
    12901 ttaagaacag cgatattaaa acccgagtca atcgctttgc tactgactcc aaataacgat
    12961 aaacaaggtt atcaagacgg ctcttatgag cggtcttttt cttttaatct aaacggatct
    13021 agcaagcaag aaatgaaagt tttaggtgtt ttgaatgcaa ttgctgctta ttttgataag
    13081 acagaaatag agagtattca gagcttaaat aacagctttg tgctagaaga caaagaaaca
    13141 actagtgtgc cgaacctcgt ttcggcgagc gatgatggaa cattcattta tagcgctagt
    13201 ttcaaaatca aattatatat tgaaagcgag gaaaaataaa aatggctaga attaaaaatg
    13261 cgaaaacgaa atactttgta gctgaaattg ttgatggtgc gggcgagcca gtatggaaac
    13321 ggctgtcaaa atggattaca aacgtgtcag acgatgggtc agataacacc gaagagcaag
    13381 gcgattatga cggtgacggc aacgaaaaaa cggttgtgct aggttactca gaagcttaca
    13441 cattcgaagg gacacacgat cgtgaagacg aagcgcaaaa cttaattgtc gctaaacgta
    13501 gaacgccaga aaatcgcgga attatgttta aaatcgaaat tccagatact gaaacagcaa
    13561 ttggtaaagc gactgtttcg gaaattaaag gttccgctgg cggcggggat gctacggagt
    13621 tcccagcgtt cgcttgccgt atcgcttatg acgaaacacc aaaagttaca aaaccctgag
    13681 gagagcccgt ccagcgtcga agtggacaag gcgactatta cgttaaaagt tggtgaaaca
    13741 tccactatta ctgcttcagt attacctgtc ggagcaagtc aagaagtaac ttttacttct
    13801 tcaaatccac caaaagcaaa agtaaatgct agtggagtgg ttgaaggtgt agcagaagga
    13861 acagcaaaca taactgttgc atctaaagga agcccttcta tcaataaagt agtacaagta
    13921 acagtggaag cagcagatta ataaataaag cccttactca atgtaggggc ttttaaattg
    13981 gaggaaatca tacatgacac aaaacaatgt aattaatatt caattagaag aatcatatca
    14041 agagtttcag cttggcacgg aactgtttag agttggttta ggtgatgaaa tgcgccgcaa
    14101 atggattgaa gcagatgaga agtacaagaa gaaactggaa aagctaaata aatacaacat
    14161 tgataataca gacgaaatga gttcagaaga atactttaca ttagaagaag atgtaaaaga
    14221 ggctttaact gaagcatatg caattttatt ggatgacgaa aaagcattcg ataaatgtta
    14281 tgcgcaatgc aaagatattt taaaaatgta ccaagtatac aatcaagttg cagaaatcat
    14341 tgtcggttca gtagaaaaac aacaaaatga aattcaaaag aaatataaag caaaaatgac
    14401 taaaaaagcg aagtgattta aatgctttcg ctcgcttttg gagttaacga tatttacgaa
    14461 tacgagggga aagagtataa gctcgattta gcttttgaca acgttctaag agtgattgat
    14521 ttaacggaag ataatagttt atctgatgtg ttcagagcta acctcgcaat tgatgtgctt
    14581 tttgctgatg atatgccttg gccacgttca aatgaggaag acaaatacgc gaacattgaa
    14641 gaaaaatcgt tggtgcttat tgatattttc actaattata ttgttaaaga aaatgacgat
    14701 ggtttgcttt atgatatcga cggaaacaag atgccaagcg ctacaaacaa caatgacgaa
    14761 gcggaagaaa ttgcttcata ttcattaacg caagatgcgg attatatcta tgcttctttt
    14821 ttacaagact acaatattga tttattagat agtcgcggga agatgcactg gtataagttt
    14881 agagcattgt tagaaagttt gcgtgatgat acaacaatta aaacgataat cggcattagg
    14941 caagcggaat taccttctgg aaaaggaaca gaaaaagaac gaaacgaatt aattaaactg
    15001 aaaaacagat ataagttaaa agattagagg tgagaacatg agtgatggat cagtagtaat
    15061 tgagattagt ttagacgata aaaaagcaga caaacaactt gatgcttttg aaaaagattt
    15121 ggaaaaagca ggaactaacg cgggggcggc attagataaa gcatatagag aagcggtttc
    15181 agatattgct agtcaatcga aacgattaaa agacacgttt gtaaatgcgt ttaaatcgat
    15241 gggaagcgct ggctcaaatg ctttaaaagc tagtttgaac tttatgcgtg agttgccttc
    15301 aaatgtacaa gccgcactat ctaaacttgc atcaacagta aaaactgggt tcgtaaacgc
    15361 tgctaaagca tctattacag tgataaagga acttggaaca agtatcaaaa acacagcagt
    15421 taatatcaaa aacggcttct tttcaattgc taagacagtg caaagtagta ttgtgtcagc
    15481 tgttaaagta tcaattaatg tcattaaatc catccctagc gcaattaaaa gtgctggaat
    15541 cagtattaaa tccgcattag taagtagttt gcaagcagct aaatcggctg ctatttcttt
    15601 tgctcaaact actgtaaaag ttattaaaag tattccagta gctgctaaaa cagcggctac
    15661 agcagtgaaa aacagtttcg tagtagctta caaagcggtg gtagttgctg cttatatgag
    15721 cgtaaaagga actattagcg ctgtgaaagc tattcctagt gctacaaaat cagcagcgtt
    15781 agcagtaagt agcgcaatga aaacggcttt tagcgctgta gcaagcgcgg cgaaaacgac
    15841 aggaacaaca gtgaaatcag cattaaaaac aggatttagc gctgtgaaat ccggagcgaa
    15901 agcggctggc caagctggca tttctgcatt aaaaggccta ggaaacattg cgaaaagcac
    15961 tggctcgtta attaaaagtg gattagtaag cggatttaac gcagctaaag cggcggcaaa
    16021 aggtgcaggc gctggaatgc gtgaagcgtt aaaaaattcg gttgaaaagc ccgccgaaca
    16081 agctcgtttt agtcttctta aattagcagc ggcattagga cttattgcgg ctactaaaaa
    16141 cgtcgtaggc agcgctattg ggcgtgttga tacgattgat actgcgacta aatcgttaac
    16201 tgttttaact ggttccgcaa aagatgcaca gttagttatg acggatttaa ccgccgctat
    16261 cgacggcaca ccaattgcgc tcgatgctgt cgcattaggc gctaaaaaaa tggtagcagc
    16321 gggtatgaaa gcagcgaatg taaaacctgt tttcacagct attgctgatg cggcgtatgg
    16381 cgtcggaaat ggttcagaat caattgacca gatgacagat gctatctcgg cattgcaagc
    16441 gagtggcgtt gcttatgcgg atgatattaa caggctagtt gacgcgggcg ttcctgcatg
    16501 gcaaatttta gcaaattcca caggtaaatc tgttggagaa atgaaaaaat atgtttccga
    16561 aggatcttta gaatcaacaa aagctatcgc aatgttgaca aaaggcatcg aagaaggaac
    16621 aactggaatg gctgggaata ctgccaaaat ggcaggtcta gcaaaaacag caggtaacac
    16681 tatcagcggt tcatttgcaa acatgaaaac cgcagccgtt aagagccttg ctaatatcgc
    16741 cgaaaactta aaaggcccga ttattcaagc gctagatgtt gctaaaaacg catttaaaca
    16801 gtttgcggca gtaacagcaa gtcctgaatt ccagaaaaaa ctttctgatt taatccaaaa
    16861 aattaaagag tttatacctg ttttaatcga atgggcgcca ttgttggcaa aagtagccgc
    16921 tggatttgtg gcttttaata ttattagtag cgtattttca aaagtagcta aactagcagg
    16981 agcgataaaa agtttgacgt ctagcgggtc actactttca gttgtagtta atacaattaa
    17041 agggtcattc gttaaattag caggaacact cggctcaaca actgctgctt tcggcgttgt
    17101 tgctgcggcg gttggcgcag tgatagctgt tatctatgga atgtataccg cttttaagga
    17161 aaacacggcg gggataaaaa gctttctatc tggcatgtgg gaagcggtga aaaactcatt
    17221 cggcaagata atagatgttt tcaaacaaat agtatcagcc ctaaaacccg tcggaagcgg
    17281 gtttaaagac atattgaaat atatcggcgt gggggcgtgg attgtacttg gtttcgcttt
    17341 agcggctgtc gttgatatta ttcaagtgct agcacgaata gtgttagtag ctattaaagc
    17401 gctacagggg ctgtattatg ctataaaagc agcatttcaa gctctacatt gggatttgaa
    17461 aggtgctaag aaaagcttag agcaatcaaa agatgcgttt gtcgaagcag gttcagcaat
    17521 aaaagatgca tttaacaaag ataattatgc actgactgga acagttgaag cattcaaaca
    17581 aatgggcgga gaagccgaaa aaacagcaaa gaaaactgaa acatccggca agaaaataaa
    17641 ggaaacatta aagcttgtag aaacaactgc caaacaaact gaaacaactg tttcgaagtc
    17701 gaatcaagca atagatacga tgctgaacgg cggagttgat cagtatggaa agaaacttag
    17761 tgaaaaaact gagtcattct taaatgcggc taaagacctt tacgaacaat atcaagaagc
    17821 aactaaaaag tctcaagata aatatagcgt agctatggaa aaggctcaga gtctcgaagg
    17881 agataagcgt aaaaaagcta tagcagatgc aaataagact ttagtagacg aaacaacaaa
    17941 gaataatagc acgttactaa ctttgcaaag cgattattca aatatgctaa aaacaaatcg
    18001 ttgggctgac gggcaagagt taactgctca acagaagaag tttttacaac aacaaactac
    18061 tgatattcaa acagagttag cgaaacaaaa tcagctgtat gttgaagcga acttattgcg
    18121 actagaacaa ggtaaaagct taaatgaaaa ggaaagaaat acgagcttag aagttcaaaa
    18181 gagcttgtat gaagaaaaga aaaaagctgt tgaaactggc gagaaatcgc ttgctgattt
    18241 gaaaaagaaa aaagcggacg cttcaactga aactgaaaaa gcaaactatc aaattcaaat
    18301 cgacgagcaa acgaagaaga acaagacgct gtctacaaac ttaaaaaact gggcaactga
    18361 aatgaacgca ataatcgcaa atggaggcac tttaaacgct gaaacatttg cgaacggatt
    18421 atctcaactt ggaaatatta gtgacgaaca gttgtctgcg ttgtggcaaa attttgtttc
    18481 tacaagcact tcaattgata atacgttgtc tggtttagct gcaatcatgg gtcaacgcgg
    18541 tggagaaggt gttcaggcgt ttgttacagc acttcaaagc ggagattata caacagctgc
    18601 attaaatatt aataacgatg ttatgaatac tctttcaact ttgccaaatg gcatgttcca
    18661 aaacgggcaa agtggcaagg accaatttat cactgcgatt aaatcagggg attttcaagg
    18721 agctggcaaa tttttacttg atggagtgaa gttaggagca tctcctctac caggtgagat
    18781 gaacaatatc ggtaaacaag gcggaaatgc aaacgcggac ggcttaaaga gtacagccga
    18841 agcaaataaa agcgctggtg ccgaactcaa aaacaatgca aaaaatggcg cttttgaccc
    18901 aaatttattc aaaatgacag ggtcaaataa tgcatccggt tttaatagtg gtattttgga
    18961 cggaaaaggt aatgcatttt cggcaggcac tggcattggc aattctgcta aatctggtgc
    19021 tggttccgtt gattccagcg gagttggttc tgattttgca tctggatatg tgaatggtat
    19081 tttgagcggt atgggcgctg ttggagaagc ggcggggtct ttagctaata aagcgcttca
    19141 agcggtaaaa gatgcgcaaa aatctaaatc accttccaaa aaagcaaaaa aactaggtgg
    19201 agacttcggc tctggttact cattaggtat tgccagcaag acgaaagcag ttaataaagc
    19261 cgcaagtaat ctcgttgctg gggcgcttgg aactgaatcg caaatcaaaa aactatccag
    19321 tacgttgaaa gacaaaatat cctcagcgat tgacgcggga ttgcattcta agaataagag
    19381 tcgtggtcaa ctcaaacaag ctaaagcatt gaatagcatt gaaggttaca ttgttcaaca
    19441 aacaaataga ttagctgcaa cagctaagaa acgtgataaa gtcgtcgctc aattaaaagc
    19501 cgctaatact aaaatggcgg acttgacgaa acaaagtaaa gagtatgcgg cttcaatcac
    19561 ggaaaaaatg caaagctatg gatctattag caacgtagac gcagaaaacc cgcagtcaat
    19621 acaagcggaa atgcagaaac gcttaaaaga aatcaaagct tttcaagcga atgtggaaaa
    19681 attgcgcaaa aaaggcgtta gtaaagacat tataagcgac atcttagaat cgggagtaga
    19741 aaatggttca tcgtatgcgc aagctcttgc taaatctgat gctaagacta tcaaagcgat
    19801 taatagcact cagaatcaaa tcaattcagc gtctaagtca atgggtaaca cagcggctaa
    19861 tgcgatgtat agcgctggta ttaacgcggc gaaaggtcta ataaacggac ttaacagtca
    19921 gaagaaacaa ctagaaaaca cagctaagag catcgctaat acaatcacta attcggtgaa
    19981 aaaggcgctt agaattcatt caccttcgcg cgtggccatc gagcttggga aattctttac
    20041 tgatggactt ggaaatggtg tattagctgg cgctaaaggt gcggtgcaat caactaacaa
    20101 aatggttgat aaagtagtaa acgctgcttc taatttgacc gttccagcta taactttgcc
    20161 gaagatttcc gcagaaaaag cgctgggcct aaaaagtgtt gatctaaaca gaactattac
    20221 agttaagacg attattgata ataagacaaa agagtctagc aatgcagatt taatcaaggc
    20281 aattaaagag tccggggcta aaccagtcat tctaaattta gatggcgaag tattagctaa
    20341 caactctaat aatcgaattg gcagcatgac agacttagga ctatacggag gtggcttact
    20401 ttgaacaaaa aaacagattt atatttaatg caagcgaata aaattatcaa gttaaacgaa
    20461 aaacataact ttgaaataag tgaagtaagt cgcgctagtc ctcaaattat caataattat
    20521 actagctatg agtttagcga cggcaatcgt tcgagtgata gtaatttcga tagcttcgat
    20581 attgaattta cttgcagatt caaaacaaat ggcaatatcg actatcacgt tcgacttgat
    20641 gaattattcg aggatatttt tattagaaaa gaatactaca ttttccatac gaaaaccccg
    20701 ggaaaaaaat attgcgttca tccagcacct ttcgatattg ataggaaagg tgctgggcat
    20761 gcgcagttta cgttaagatt tgaagttttc aaaggtttta gcgaatcgtt aggcactagc
    20821 ctttcgcctt ttgctttcag cgagggcatt tggcaagcgg gacaaggcat tgtatcacaa
    20881 aattataagt ataagcacac atcaaacaga tttattgtgt ataacgcggg gagctttgat
    20941 attgacccta gaatgcacga tttaagaatt actattaaga attgtcgaag tgacggctta
    21001 ctaacaatta acaataaaag cactggtgaa aaattcgtat tcaatgagaa aatctacgct
    21061 tatgacacaa tcgaactgga cggcagtaac atcttgaaaa acggagtgcg ttgcgggcgg
    21121 aaaactaatc tcggtcttat ttcgttatta tccggcggaa atgaaatcga aatcgagaat
    21181 gtaagcaata tcgaaacaac gtgggatttt ccgtttttat ataaatgatg gtgggtgaga
    21241 atatggacat atttgtaagt gactatgaaa agcaatacaa agagatttta acaggctttg
    21301 accctactac attttcagaa acgtgggtcg aaaatcagca atggcaacta gatttttatg
    21361 tagagaaaac aagaaataat caagatgttt tcgacttatt aaatcatgaa agctctgttt
    21421 atctggatgg ccaagaattt gttgttaagc agctaaaacg cggcgcagtt gggaaaatag
    21481 tttattcaga agtcacagca acgcatattt atttcacgat gcaagatgac tatcagtaca
    21541 acgctatttc gggttctaag agtgcaaaag attgtttgac acatattttc gcagctgata
    21601 aacaaggttt tagctttgaa ctcattgaca aaaacaaggt tttagaaaat attacacaag
    21661 aaaattttgg gaatggcaat ttactaaagc tagttcaaga agtgttggaa gattataagc
    21721 ttgttatgct agcagacaat aaacgattaa catttattcc ctctgaagat tacggagagc
    21781 atacagaaaa cgaaattcgc tacaataagc acacaaacga agtcgatttt gatattgata
    21841 cgttatcctt aagaactcaa attaagggct atggaaaagt cgacagcaac ggaaataact
    21901 actttccgcc agttactttt accagcccgg aatcggctaa atggggcgtg cgaattcaag
    21961 aaccgttatc agacgagcgt tatacaactt ctagcagcat gctaagacgt ttgaagcttg
    22021 aactacaaga ctatccagcg acgactggaa atatctcttt aaagcttaaa tacgaatgcg
    22081 gaaaaggcga ttatgtaatg tttgtttatg aaccgctggg ccttttatac gaagttcaaa
    22141 tagtcgctta taagaaatac atttttacaa acaaaccgcc agaattgacg ttatctaata
    22201 acaaaaaaac aatggtttct atcatggttc aactagcaaa agcaattaag agaggagcga
    22261 aatagatgga tttaaaaaaa tggcaagacc cactcatgaa ctcagaacta cagcaaaact
    22321 ataacgataa tttagtaaaa ctagctggaa gccttgaaaa agctaatcaa gatatgacac
    22381 atgttaatca gcgcatatct aacttagtta ttaaatccgg cgggaatgaa tcgaacgaag
    22441 tagtagacgc acgcgtttct tctctggttc cagaaactga attcacaaca ttaaacgata
    22501 gaataaatta cgcggaaaat gctttaataa caggtgtcgg aaagctttca acgaatgttt
    22561 ttgatctaat ggataaatac aacgatatag atactatttt aaagcgttta tatggcttag
    22621 atagcagcaa tattgaaata tttgtggatg atgcaagagg cgatgatatt gcaggaactg
    22681 gtgaaattga tgcacctttt aaaacgataa ataaagcagt aatgactttg ccccgtgtat
    22741 tgaatagtaa ctctgtgaat atctggattg ttcctggtcg gtataatgaa gatgtcgtta
    22801 ttccgccaat catgggaggg gatatctaca ttaggtctac aaactttgaa acagtagacc
    22861 ctaccagtag caccggatgc caagttcgaa gtatttctgc gacaggaagt aacggctatt
    22921 tatatattgc tggtttagaa gaaacgaaca cggcaggcac aacgaaaaac tacttcatta
    22981 aagcgacgcg atgcggattt gtaaggatta caaaatgccg aatggccttc aatactaagg
    23041 caatagaccc gttcactgcg gtttttattg atgcttgttc tgctgatgtc aacggctgtt
    23101 attttgcctc acaaaatgtt gatgttcgcg gttataacac tgctagagtc gaggttcaga
    23161 atatcgtcca tggcgcaaaa agtgcgattg gtttgtatcc tcaaagcgcc gatattttca
    23221 atctcaatag cgggacttgg gaagctgata cgcctacgaa actgagtggc gggggagtgg
    23281 ttagaacatg actgaaaacg ttattcataa aaatggtgta tatgatttta acgtcacaac
    23341 gcaagaagat aaaccacttc aaaaatctgt tttttatacg caagattctg gcggaacagc
    23401 tagacttatt tttaatatag ataaagataa tcaagattta gtattatcgt ctgctgctga
    23461 attagagctt gcaatgattt tagcgaaagg aacagagtca gagagtaagt atcttgtgaa
    23521 accaactatt attgatggtg ttaggggaat tgcagaatac tcacttacag actctcaaat
    23581 agcacacgct ggcaatgcta ttgctgaatt gtatataaaa tacaaaaaca gtcaagcgat
    23641 gcgggtatat aaattcagtt ttgagataaa aaaagcatta atagatagcg actttttccc
    23701 agtatcagaa ttttatgtgg agcgctggga tgattacgaa aaaatattcg atgaatcgtt
    23761 cgagagatta aacactaaat tagatgacgt tgataaaaaa gcagatgatt taaaaacaca
    23821 atttgatgat atgcagccat cgcaattcgc acaaaaaaca gacttaaatg cacatgtaaa
    23881 taatgcggat attcatgtca ccgcagcaga taaaacgaac tggaattcaa aagaaacagc
    23941 atctagcgca caggctaaag cagataaagc acttgctgat gcaaaaactt ttttcgaact
    24001 agctagtgcg gtgcaaagcg ttactttgac gccaaaaaac ggatttgttg caagtcagcc
    24061 tttagtcgct cgatacatta agtttggcaa ccggtttcta gttattgtta gcggaattgt
    24121 aggaaaaggg accgggaacg ggacaggtat atgtgcaaca tt
//
LOCUS       DASDYO010000030        23589 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.030, whole genome shotgun sequence.
ACCESSION   DASDYO010000030 DASDYO010000000
VERSION     DASDYO010000030.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 23589)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23589)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23589
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.030"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(97..489)
                     /locus_tag="U0290_001043"
     CDS             complement(97..489)
                     /locus_tag="U0290_001043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301089.1"
                     /translation="MNWTRISSIVIVGFTAIGAIYGGLSMVFMPSGGLLSLSTGLLDG
                     SPFVDYLVPGIFLFVFVGLFHLAALIYLLKKLPRTKEVMFAAAAVLAVWMIVQLLIIG
                     YVFILQIIFLVVAAVEMFLAIQLKKQQR"
     gene            complement(534..743)
                     /locus_tag="U0290_001044"
     CDS             complement(534..743)
                     /locus_tag="U0290_001044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301090.1"
                     /translation="MRENSIIGRIIAFCAICFAFFNPKTVTYWLGVRAESGPAWYLTT
                     VVACGIAVFVLIDLIKKIKRRKTAE"
     gene            complement(894..1871)
                     /gene="bsh"
                     /locus_tag="U0290_001045"
     CDS             complement(894..1871)
                     /gene="bsh"
                     /locus_tag="U0290_001045"
                     /EC_number="3.5.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="choloylglycine hydrolase"
                     /protein_id="HEM2301091.1"
                     /translation="MCTSITYTTKDHYFGRNFDYELSYKEVVVVTPKNYPFHFRKVED
                     IEKHYALIGIAAVMENYPLYYDATNEKGLSMAGLNFSGNADYKDFAEGKDNVTPFEFI
                     PWILGQCATVKEARRLLQRINLVNISFSENLPLSPLHWLMADQNESIVVECVKDGLHI
                     YDNPVGVLTNNPTFDYQLFNLNNYRVLSSETPENNFSNEIDLDAYSRGMGGIGLPGDL
                     SSMSRFVKATFTKLNSVSGDSESESIGQFFHILGSVEQQKGLCDVGGEKYEHTIYSSC
                     CNIDKGIYYYRTYGNSQITGVDMHQEDLESKELAIYPLVNEQQLNIVNK"
     gene            complement(2126..3754)
                     /gene="groL"
                     /locus_tag="U0290_001046"
     CDS             complement(2126..3754)
                     /gene="groL"
                     /locus_tag="U0290_001046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465592.1"
                     /note="60 kDa chaperone family; promotes refolding of
                     misfolded polypeptides especially under stressful
                     conditions; forms two stacked rings of heptamers to form a
                     barrel-shaped 14mer; ends can be capped by GroES;
                     misfolded proteins enter the barrel where they are
                     refolded when GroES binds; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chaperonin GroEL"
                     /protein_id="HEM2301092.1"
                     /translation="MAKDIKFSEDARRAMLRGVDQLANAVKVTLGPKGRNVVLEKKFG
                     SPLITNDGVTIAKEIELEDPFENMGAKLVSEVASKTNDVAGDGTTTATVLAQAMIQEG
                     LKNVTAGANPVGVRRGIEKAVATAIEELKAISKPIESKESIAQVAAISSGDEEVGKLI
                     AEAMERVGNDGVITIEESKGFATELDVVEGMQFDRGYTSPYMVTDSDKMEAVLEKPYI
                     LITDKKINNIQEILPVLEQVVQQGRPMLIIAEDVEGEAQATLVLNKLRGTFNVVAVKA
                     PGFGDRRKAMLEDIAILTGGQVITEDLGLELKTATVDQLGTANKVVVTKDDTTIVEGA
                     GDSTQISARVNQIRAQMEETTSEFDREKLQERLAKLAGGVAVVKVGAATETELKERKL
                     RIEDALNSTRAAVEEGIVAGGGTALVSIYNKVAALEAEGDVETGINIVLRSLEEPVRQ
                     IAHNAGLEGSVIVERLKHEAVGVGFNAANGEWVNMIDAGIVDPTKVTRSALQNASSVA
                     ALLLTTEAVVADKPDENGPAAVPDMGMGGMGGMM"
     gene            complement(3788..4072)
                     /gene="groES"
                     /locus_tag="U0290_001047"
     CDS             complement(3788..4072)
                     /gene="groES"
                     /locus_tag="U0290_001047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="co-chaperone GroES"
                     /protein_id="HEM2301093.1"
                     /translation="MLKPLGDRVVIEVLEAEEKTASGIVLPDSAKEKPQSGKIVAVGS
                     GRVLDNGTKEPLEVAEGDTVIFAKYSGTEVTYEGTDYLILRESDILAITK"
     gene            4307..4993
                     /locus_tag="U0290_001048"
     CDS             4307..4993
                     /locus_tag="U0290_001048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465594.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM2301094.1"
                     /translation="MAKRYITIVLVYLLLLFSASVGIPIVQHILLSTTSLSAESAASY
                     GMVIWSIFSNLLSLAIIIPMLYRKPKENKIEIGEKTKPLLSIVWIVGGVIGLYVAQII
                     CSVIITMISGELSNSANTELLVDLTKAAPIFLIFISILGPILEELVFRKVFFGGLSNV
                     TNIHVAAVISSLFFGLLHGDISFLLTYFVIGLILCFLYTKTKRIVVSMGAHILMNTIV
                     LLLSLGIIGG"
     gene            4995..5192
                     /locus_tag="U0290_001049"
     CDS             4995..5192
                     /locus_tag="U0290_001049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4305 domain-containing protein"
                     /protein_id="HEM2301095.1"
                     /translation="MKNSLIKQSFLYFALGLVFVYFVVVRVADYGYDVLACILIIMTL
                     MDFGIGIGLIITGLKRRKKNL"
     gene            complement(5226..5873)
                     /locus_tag="U0290_001050"
     CDS             complement(5226..5873)
                     /locus_tag="U0290_001050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="redox-sensing transcriptional repressor Rex"
                     /protein_id="HEM2301096.1"
                     /translation="MMEETTKIPQATAKRLPLYHRYLKYLDESGKERVSSAELSEAVK
                     VDSATIRRDFSYFGALGKKGYGYNVSYILDFFSKTLSQDKQTNVALIGVGNLGTALLH
                     YNFMKNNNIKIVAAFDVDPAKVGSVQQDIPIYHLNDMEEIVRENGVEVVILTVPADEA
                     QVTVDRLIEADVKGILNFTPARISVPKQVRVHHIDLTTELQTLIYFLENYPAKTE"
     gene            6183..8135
                     /locus_tag="U0290_001051"
     CDS             6183..8135
                     /locus_tag="U0290_001051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F family ATP-binding cassette
                     domain-containing protein"
                     /protein_id="HEM2301097.1"
                     /translation="MILLQVQQISKFFGAEVILDNIKLEVKTGDRIALVGRNGAGKST
                     LLKIIAGKMSYDGGTISKPKSVEIGYLAQNTGLESSKTIWDEMLSVFDSLRKMEADLR
                     KMELRLGEPELYNDPEKYQALMTDYDTLQHTFKESGGYTYEAEIRSVLNGLRFYPEDY
                     EVEIASLSGGQKTRLALAKLLLAKQDILVLDEPTNHLDIETLAWLETYLQNYHGSLLI
                     VSHDRYFLDKVVNQVYEISRTKIDHYKGNYSSFVNQKQAKLEQMWKEFDKQQKQIAKL
                     EDFVARNIVRASTTKRAQSRRKQLEKMDVLGRPQGDEKAAHFGFQFEKQTGKDVLMVD
                     QLSIGYAKDKRIASNLTFEMKRQDSLALVGPNGIGKSTLLKTLIRDIPALSGEFHFGA
                     GVKIGYYDQEQAKLTSNKTVLMELWDDYPELNEVNVRTTLGNFLFSDDDVLKNVQSLS
                     GGEKARLALAKLTLLEANVLILDEPTNHLDIESKEVLEAALIDFEGTILFVSHDRYFI
                     NRIASKIVELAPEKATVFLGDYDYYQEKLAEEKELARLDAEDRRKKGEQVEATSSVRK
                     LNYQEEKEQQKLLRQRKRKLEEVEKSMEATDKKIAELELQLTNPEVFQDHEKALEITQ
                     ELDAVKADGEKLMEEWEQISEELESM"
     gene            8160..9119
                     /locus_tag="U0290_001052"
     CDS             8160..9119
                     /locus_tag="U0290_001052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465598.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2301098.1"
                     /translation="MKKILIISSSIIVGLLVIITICASFYLYSYALARDNSSMNDTAT
                     TDETTATAKLAKKNREENVAWMEKQNLTQWTETSADDLKLVATYLAADKPSNTTIILA
                     HGYRGKSGKVEMAGLARMYHEKFGYNVLMPDARAHGKSEGENIGFGWPERKDYVQWID
                     QVIDKNGTDTQIALHGVSMGSSTVLMTSGEKLPKQVKSIIADCGYTSMDAELSYQLKA
                     MFHLPKFPIIPTASLINKFKEGFFFSEASAVDAVAKTDVPIFYIHGDADAFVPTNMVD
                     ELYKATNSYKEKWIVKGAEHGQAFTVDPKTYEEKVRQFLNKTM"
     gene            complement(9664..10686)
                     /gene="tsaD"
                     /locus_tag="U0290_001053"
     CDS             complement(9664..10686)
                     /gene="tsaD"
                     /locus_tag="U0290_001053"
                     /EC_number="2.3.1.234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465599.2"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     transferase subunit TsaD"
                     /protein_id="HEM2301099.1"
                     /translation="MKKNTLILGIESSCDETAASVVKNGNEIISSVVASQIESHKRFG
                     GVVPEIASRHHVEQITLVIEEALKQANVTMDDLDGIAVTEGPGLVGALLIGVNAAKTL
                     AFMHNLPLVGVHHIAGHIYANCFETEFKFPLLSLVVSGGHTELVLMKADNEFEIIGET
                     RDDAAGEAYDKVARTLGLAYPGGVQIDKLAKDGEDTFHFPRAMMDEGSFDFSFSGLKS
                     SFINTLHNLRQRGEEPNPNDMAASFQASVVDVLVSKTIRAAKQYDVKQLLLAGGVAAN
                     QGLRERLIQEVKLELPETELIIPPLALCGDNAAMIAAAGTVSFLQGKRSGFDMNANPG
                     LLLEDI"
     gene            complement(10683..11138)
                     /gene="rimI"
                     /locus_tag="U0290_001054"
     CDS             complement(10683..11138)
                     /gene="rimI"
                     /locus_tag="U0290_001054"
                     /EC_number="2.3.1.266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal protein S18-alanine
                     N-acetyltransferase"
                     /protein_id="HEM2301100.1"
                     /translation="MSLDEALLFREATVTDLKSIMNVENAAFTVPWTEAAFRNEFIIN
                     QYAYYLLAIYKEQVVGYAGVWLVLDEGHITNIAIHPDYQGNHYGEALLREMIRVAKER
                     GVVRMTLEVRVSNDVAQGLYKKLGFQDGAIRKNYYPDTKEDALVMWVDL"
     gene            complement(11135..11827)
                     /gene="tsaB"
                     /locus_tag="U0290_001055"
     CDS             complement(11135..11827)
                     /gene="tsaB"
                     /locus_tag="U0290_001055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465601.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     dimerization subunit type 1 TsaB"
                     /protein_id="HEM2301101.1"
                     /translation="MILGMDTSSDTMAIALFNEGVVIGEYTTNLKKNHSVRLLPAIAV
                     LMEECGVKPTDLEKIAVAKGPGSYTGLRIGVTVAKTMAWDAGIPIVGISSLALLAENG
                     LYFPGKVVALMDARRSNVYAGVYQASEGEMQSVIADGHIALTELLEQFLSSEEPILFV
                     GTLTEQICVTVTEVLGERAVFAQADYTYSRASSLVKLAENLDGEPADNFVPDYLKLAE
                     AESKWLESRGSE"
     gene            complement(11824..12285)
                     /gene="tsaE"
                     /locus_tag="U0290_001056"
     CDS             complement(11824..12285)
                     /gene="tsaE"
                     /locus_tag="U0290_001056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465602.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (adenosine(37)-N6)-threonylcarbamoyltransferase complex
                     ATPase subunit type 1 TsaE"
                     /protein_id="HEM2301102.1"
                     /translation="MEFELIMTSERETRLRAKQLGEQLTAGDVILLEGDLGAGKTTFT
                     KGLGEGLLIPQMIKSPTFTIIREYKKGRLPLYHMDVYRLEDASADELGLEEYFYGAGV
                     SVVEWAQFVREDLPEEYLEIQLFHIDENTRKLVVKPVGERYEQLAMEVFGK"
     gene            complement(12390..13535)
                     /locus_tag="U0290_001057"
     CDS             complement(12390..13535)
                     /locus_tag="U0290_001057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465603.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301103.1"
                     /translation="MMKKGILLSILLALVLVISACGESAEEKAAKTPQGKFVQTMKNG
                     MNVPDQSTYTTSFAVNDINVSSTDPSAQTMGILKDIKLSVTTSTDKKANKSEAKFNVT
                     STNNLLPISMDLDFLVDSKTGNAYIPLKTIVEPDASLLSYLDQATGGMWSKINTDYPD
                     LKNKYLSTEELTSSLTDQPEAKTAVDTKEIEAATKDLNKKAIKLVDTYFTGLEKDRFK
                     EADDGTVSVTIKNADIANLMNQVAKLMDDEKVKADLKVIAESQGSDAVTDFDSTYTEM
                     KSSLTDAAKELKENKTYLINNKLTVKSGKENSLDTLTLQTKIEDKSDASAPESISFTV
                     KTKAEEFVPIEDFPTKDEVISSEELNKIITDVTAKMYGGMDISGTNY"
     gene            complement(13669..14049)
                     /locus_tag="U0290_001058"
     CDS             complement(13669..14049)
                     /locus_tag="U0290_001058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465604.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301104.1"
                     /translation="MTGFKKVILPVLLVVLFLAGCNQAEVPALVLDGTVTDTSLLENN
                     NELTVNGTLTWSGEKNNYASEVLITVSSNTAVTNATTGKAMKLADIKEEDTVRAVFPQ
                     GSNITSPAPGKVSENATSLKVTPK"
     gene            complement(14144..14500)
                     /gene="crcB"
                     /locus_tag="U0290_001059"
     CDS             complement(14144..14500)
                     /gene="crcB"
                     /locus_tag="U0290_001059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465605.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEM2301105.1"
                     /translation="MLVNFVLVGFGAALGAMLRYGISVLVKSKWKTNFPFATFFINIT
                     GSFLLGFLVSSALGPVWQLFLGTGFMGGYTTFSTFKVESMELKWKTNYRVLFSYLGCT
                     YVFGLIAAFLGLMLGV"
     gene            complement(14490..14879)
                     /gene="crcB"
                     /locus_tag="U0290_001060"
     CDS             complement(14490..14879)
                     /gene="crcB"
                     /locus_tag="U0290_001060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012951875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fluoride efflux transporter CrcB"
                     /protein_id="HEM2301106.1"
                     /translation="MYFLYVGVFGALGGMCRYAMNLWLGGGDFPSATLAVNLIGCFLL
                     AFLMQFLAEKSRISLVILNGIGTGFIGAFTTFSAFSVDTIQLVQSGAWLFAVSYVLAS
                     FIGGLIMVKFGRMLSNKLLNRGEHRVS"
     gene            complement(14985..15611)
                     /locus_tag="U0290_001061"
     CDS             complement(14985..15611)
                     /locus_tag="U0290_001061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465607.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GyrI-like domain-containing protein"
                     /protein_id="HEM2301107.1"
                     /translation="MTEKKIDFKKEEKKFYAPKRKPERIFVPEMNFLMVDGKGDPDGE
                     AYQKAVQSLYAIAYTIKMSKMGETRLDGYTDFVVPPLEGFWWSEERFDLKDRDAWLWT
                     SILRQPDFVTEEVLEWAKEVAKKKKPDLDTSHVKLVRFEEGECVQMMHIGPFSEEVKT
                     VAEMHQFMETEGLHNDTGAVRKHHEIYLSDPRKVDPEKMKTILRLPVS"
     gene            complement(15608..16501)
                     /locus_tag="U0290_001062"
     CDS             complement(15608..16501)
                     /locus_tag="U0290_001062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphotransferase family protein"
                     /protein_id="HEM2301108.1"
                     /translation="MDVTQLKMLHNAKVISEINKGFSVDRKYQVDETYLVRVFPIDLL
                     QEREQEFKIIQALDSQTPFVPKAYDFGFIEREGYMIISYLRGEDAEIGMTRLSHSEQL
                     KAGFSAGEILREVHKIPLAIPKMNWLDFQTVKFERKVKELKELEITASFLTDTEKFVN
                     ENIARLKNRPICLQHGDFHPANIILNNKKFVGLIDFNRLEFGDPLFDLAKIGFFTTEV
                     SIPFARGNILGYIDKEEVTDFWNLYALYTAMHITSAVNWAAKNESRNFKKLMDYAAKT
                     VASHDNFQRIVPNWMNEEEFK"
     gene            16633..16716
                     /locus_tag="U0290_001063"
     tRNA            16633..16716
                     /locus_tag="U0290_001063"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:16667..16669,aa:Leu,seq:gag)
     gene            complement(16769..18457)
                     /locus_tag="U0290_001064"
     CDS             complement(16769..18457)
                     /locus_tag="U0290_001064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2301109.1"
                     /translation="MQKKLIGSLFILIVLLIIGSTSEKVQASPTSSNGWQLKWAIKNN
                     DFEDVDIEDYGVDAGTTNVWQVNQKGVEAWGTTNPTGNIEVWQNGNGYNVPAFSGNNF
                     IELNSDGIGPVYQDIRTIPGSNLTWKFSHRGRMGVDTADLLIGSPESQTEVSRVSDGE
                     TWGSFEGNYIVPEGQTITRLTFNPISTASGSLTSGNFLDDIQLYINVNGAKIGDVVWY
                     DFNGDGIQQDSEEPAPFVKVDLLTKDGVFKESATTNNIGSYLFTDVLPGDYQVKFTLP
                     NNDFIFSKANQGNDTTLNSKPDKTGIASVNVPNLKSENFDMDAGITTNGKVEIQKFSG
                     DKALSGAVYAIKDNSQSEVAKITTGQNGTGTAEGLPPGKYTATEVTAPLGYQKNPTPK
                     TFTITYGDTNPVKLTFQNVEKTGSITIFKQDEANKKGLANAVFDVKSTDGTTLKKVTT
                     NSKGYALAENLQPGTYVITEATAPPGYEKSTKEIRVTIPFNPQKTINISFSDNKIMVP
                     KKPTPTKGSTVVKVSGETTKITALPQTGDSSNSSTIFIGLLIVVVSGLFVYRRY"
     gene            complement(18554..19825)
                     /locus_tag="U0290_001065"
     CDS             complement(18554..19825)
                     /locus_tag="U0290_001065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2301110.1"
                     /translation="MNLIGLRIKNIRKEKQLTLKDVAQGIISVPYLANIENGIKVASL
                     ETLIHIARRLEIPEEVLLMSEDEENRALLKELDEIFKLLVCSNPKEIESRLKKIAENV
                     ELQHESPAVELSFYCLQVAFYYKTWKFSRAEEVEAKYLKNAEKRVENAFPPQLLSYYY
                     YGQAVKHSHATCNYQLAVEYWEKCVALTDNKNFLTVFHVCICINYICQSIYEPALGHI
                     QQAWDLIKDEEQERFVSILYFYGYIYFQIGFIGEAKYRFKQAQKYFSKYPEAKKIYYF
                     VVQLKMAEIENIEGNETLFYEKITCLYKEIMAYKTTNISFNNNDYLVITELMVIFAEK
                     GFVEEATSLMGLMNTVVERVQELNYFMEYTEILLLYQQDEQVSYEKKMIQLLKKINAS
                     NDPALIERVKKHASKHFAKSTKYKMAYDILS"
     gene            complement(20461..21792)
                     /gene="fepA"
                     /locus_tag="U0290_001066"
     CDS             complement(20461..21792)
                     /gene="fepA"
                     /locus_tag="U0290_001066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MATE transporter FepA"
                     /protein_id="HEM2301111.1"
                     /translation="MAKNMEILETDSVKKIYFRYLIPSLVGMLLMSLNIVIDGIFVGH
                     KLGGVALAGINIAVPVFTIFTAISIWIGIGAATQFSFAIGEKNVAKAQTIFTNAILAV
                     VSITVIIGIIAFIFKVPLAYFLGANDDTIGYVLEYMNILLVFGFALTLENILSIFVRN
                     DGDPNLSMIALIVTAISNVILNYLFLFVFEWGVTGSALATMIAIIIGVLILITHFFKK
                     SSRLKFVKVDWNKAFFKKTLAIGLPSFLAEVGVSVFTLGYNISIAAIAGTAGVAAFSV
                     LNYTHSVILMLFLGMGSAIQPLISYYRGAKARQKEIETLKIAIMVAFSTGVGFLLVGL
                     FGSNLLVSMFGNFSPEIKDLASNGIKLFYTAYLFMGFNFVMMTYFQTSDKVKMATWIT
                     ISREIIFMVIFLLVLPPIIGIPGVWLAIPISEMIVAASIIFYMKKKHILFK"
     gene            complement(21802..22392)
                     /locus_tag="U0290_001067"
     CDS             complement(21802..22392)
                     /locus_tag="U0290_001067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2301112.1"
                     /translation="MRKEEIKQAALTLFANNGFEGTSLADIAGVVGLKKQSIYSHFKD
                     KDDLFLSIMKDAKSTEIDYYRAKLRDSDLSRPDLVLSSLLFGVKELYDTDEAYQFWLR
                     YGFYPPKHLYEVVQADITENVLQMEHEFTNLFSNWMEQKLIPMQDVETMKEAYMGILD
                     AVIVDIVYVNDPERTEKKITALWQIFWRGITLKALN"
     gene            complement(22503..23546)
                     /locus_tag="U0290_001068"
     CDS             complement(22503..23546)
                     /locus_tag="U0290_001068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465613.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2301113.1"
                     /translation="MKNTIKWIAIGFAGIILLPLLIVFFIYKKAVGKKEYNPEVLENL
                     DEASQKFVKNTSPLSDVDSRYKYMRLATKALPSAKDIEIGDVENKKIDGPAGKIPIRI
                     YTPQEDGPFEIIVYYHGGGFVLGGLQTHDAIARKLVQTTGARVVTVDYRLAPENPFPA
                     AVEDAYAALLWVQNHRTSLRAKSSDIIVAGDSVGGNLATVVTQIAKSKGKPNITAQIL
                     LYPATDIFSRDASVLYPSMDEFAEGYVLTKESLDKFFKLYIANASDRKYDPLVAPIRS
                     KDLVGLPKTFIATAEFDPLRDQGEAYAKKLKDAGVEVFAKRFEKVPHGFMTTNSEATD
                     ETYELISEFLEEK"
BASE COUNT         7141 a         5017 c         3851 g         7580 t
ORIGIN      
        1 acattcgcgc ttataaatta tgttttctaa agctaaaaag ttaggctatc tatctccctt
       61 aaattcagga aaaaaatagc ctaactaaat tctatttcac cgttgctgtt tttttaattg
      121 tatcgctaaa aacatttcta ctgctgcgac aactaaaaag ataatttgta aaataaatac
      181 atagccgata atcagtaact gtacaatcat ccaaactgcg agcacggccg ctgctgcgaa
      241 catgacttct ttcgttcgtg gtaatttttt cagcaaataa atgagtgctg ctaaatggaa
      301 taatccaaca aatacgaata aaaatatgcc tggtactaaa taatccacga acggtgaacc
      361 atcaagtaat ccagttgaaa gagatagtaa accaccactt ggcatgaaaa ccatggataa
      421 tccaccataa attgctccta ttgctgtaaa accaactatt acaatactac ttatacgtgt
      481 ccagttcatg gcgttctcct agtcgttttt ctagtagtat accacgaaaa ctttcattct
      541 gccgtttttc ttcgttttat ttttttgatt aaatcgatca atacgaaaac cgcaataccg
      601 catgcgacaa ctgtagtgag ataccaagct ggaccggatt ctgcgcgtac tcctagccaa
      661 taagtcactg ttttcgggtt aaaaaatgca aagcaaattg cacaaaatgc aataattcga
      721 ccaataatgg aattttctct catagcaagt gcatctcctt ttcttttatt ataacaagga
      781 ataagaaatg ataacttagc ttttcggtcc caaagttgtt tttcatctga caagttttgg
      841 tttttttaca caaaaaaact acgacaagag aatttcttgt catagcctca cagttattta
      901 ttaacaatgt ttagttgttg ctcattaacg agtggataaa tagctagttc tttgctctct
      961 aaatcctctt ggtgcatatc cacaccagta atttgactgt ttccgtatgt tctataataa
     1021 taaattcctt tatcgatatt gcaacatgag gaataaatgg tgtgctcgta tttttcccca
     1081 ccaacatcac acagaccttt ttgttgttcc accgagccta aaatatggaa aaattggcca
     1141 atgctttctg attcagaatc acctgaaaca gaattcaatt tggtaaaagt tgctttcaca
     1201 aaacgagaca tagaagataa atcgccaggt aagccgattc cgcccatccc acgactataa
     1261 gcatccaaat caatctcgtt ggaaaaatta ttttctggag tttcactcga aagaacgcga
     1321 taattgttta aattaaatag ttggtaatca aatgttggat tatttgttaa cacgccaaca
     1381 ggattatcat aaatgtgaag tccatctttc acacattcca ctacaataga ttcgttttga
     1441 tcagccatca accaatgtaa aggagatagc ggcaaatttt cactaaagct aatattcacg
     1501 agattgattc tctgaagtaa tcttcttgct tcttttacag tagcgcattg accaagaatc
     1561 cacggaataa attcaaatgg cgttacattg tccttacctt ctgcaaaatc cttgtaatcc
     1621 gcatttcctg agaaattgag tcctgccata ctaaggcctt tttcattggt agcatcgtaa
     1681 tacaacgggt agttttccat cacagcagca ataccaataa gtgcataatg cttctctata
     1741 tcctctacct tgcgaaaatg gaacgggtaa tttttcggcg taacaaccac aacctctttg
     1801 taagaaagtt cataatcgaa attccttcca aaatagtgat ccttcgttgt ataagttatt
     1861 gacgtacaca ttaaaaatcc ctcctcaaat ttttcaccat acatgtatac cagtaccctc
     1921 ggacttttgt gtaaaacata atttgtggtt tttttcacaa aaaatggcca atttattacc
     1981 tcatacaaga tgatttggct ctgataaaaa ttttttaaag tatactcctc tattaacttc
     2041 ttgaaaatat tctgctataa aatcataata aaaaagatcc ctggaaaatc cagagatctt
     2101 ttaaaaatgt cagctgatgt taaccttaca tcatgccgcc catgccaccc attcccatat
     2161 caggaacagc tgctgggccg ttttcgtctg gtttgtctgc tacgactgct tctgtagtta
     2221 atagaagtgc agcaacagat gatgcgtttt gaagtgcgga acgtgttact tttgttggat
     2281 ccacaatacc agcgtcaatc atgtttaccc attcgccatt agctgcgttg aaaccaacgc
     2341 caactgcttc gtgtttcaag cgttcaacga taaccgaacc ttcaagtcca gcgttatgcg
     2401 cgatttggcg aactggttct tctagggaac gaagcacgat gttgatacca gtttctacgt
     2461 caccttctgc ttctagtgct gctactttat tgtaaatact tacaagagca gtaccaccac
     2521 cagctacgat accttcttct acagctgcgc gagtagagtt aagcgcatct tcaatacgta
     2581 atttacgttc ttttagctct gtttcagttg cagcgccgac tttgacaaca gctaccccac
     2641 ctgcaagttt tgccaaacgt tcttgtaatt tttctctatc aaattcagaa gtagtttctt
     2701 ccatttgcgc acggatttgg tttacgcgag cgctaatttg tgtggaatcg cctgctcctt
     2761 ctacgattgt tgtatcatct tttgttacaa ctactttgtt cgctgttcca agttgatcaa
     2821 ctgttgctgt ttttagttct aagcctaggt cttctgtgat gacttgtccg cctgttaaaa
     2881 tagcaatatc ttctagcatt gctttacgac gatcaccaaa accaggagct ttcacggcta
     2941 ctacgttgaa tgttccgcga agtttgttta gtacaagagt tgcttgagct tccccttcaa
     3001 catcttccgc aatgattaac attggacgac cttgttgaac aacttgttct aaaactggta
     3061 agatttcttg gatgttgttg atttttttgt ctgtaattaa aatatatggt ttttcaagaa
     3121 ctgcttccat tttgtcggaa tcagttacca tgtatgggct agtgtagcca cggtcaaatt
     3181 gcataccttc tactacatct aattctgttg caaagccttt ggattcttca atagtgataa
     3241 cgccgtcgtt accaacacgt tccattgctt ctgcgattaa tttaccaact tcttcatcac
     3301 cagaagaaat agcagcaact tgagcgatag actctttgct ttcaattggt ttagagatag
     3361 cttttaattc ttcgatagct gttgctacgg ctttttcgat accgcggcga acgcctactg
     3421 gatttgctcc agctgttacg tttttcaagc cttcttgaat cattgcttgc gctaaaacgg
     3481 tagctgttgt agttccgtcc ccagcaacat cattggtttt agaagcaact tcagatacaa
     3541 gttttgctcc catattttca aatgggtctt ctaattcgat ttcttttgca atcgttaccc
     3601 catcatttgt aattaacgga gaaccgaatt ttttttctaa aacaacatta cgaccttttg
     3661 ggccaagtgt tacttttact gcgtttgcta attggtcgac accacgtaac atggcacgac
     3721 gagcatcttc actaaattta atatcttttg ccattttata tttccctccg attatttctt
     3781 tttttaatta tttagtaatt gctaaaatgt cactttcacg taaaatcaga tagtcagttc
     3841 cttcatacgt cacttctgtt ccagagtatt ttgcgaagat aaccgtgtca ccttctgcaa
     3901 cttcaagtgg ttcttttgtg ccgttatcta gcacacgacc tgaaccgact gcaacaattt
     3961 tccctgattg cggtttttct ttggcagagt ctggtaatac aatcccactc gctgtttttt
     4021 cctctgcttc aagtacttca attacaacac gatctcctaa tggttttaac aatgtaaatg
     4081 acctcctctg atataattac ttttttcatt ttagcactcg acacattaga gtgctaatac
     4141 agttattatg ataccaaact gaataaaaaa tgcaagcaaa aacgtttaaa aaaatagaag
     4201 aattcttatt tgcggtaaag cttcataacg agtacaataa gaagagctat ttccgcttat
     4261 ttgaagcaat ttagccaatg ttttttatag aaaggatgcg taatttttgg ctaagcgtta
     4321 tattacgatt gttttagttt atttattatt actattttct gcatctgttg gaattccgat
     4381 tgttcaacat attttactaa gtacaacatc actttcagca gagagcgccg catcttatgg
     4441 aatggttatt tggtcgatat tctctaatct tttatcactt gcaattatta ttccgatgct
     4501 ttacagaaag ccaaaagaaa ataaaatcga aattggtgaa aaaacaaagc cgcttctaag
     4561 tattgtgtgg attgtcggag gagtcattgg cttatatgtg gcacaaatta tttgtagtgt
     4621 tattattacg atgatttcag gggagttaag taattctgcc aatacggagt tacttgttga
     4681 tttgactaaa gctgcaccta ttttcttgat ctttatttct attttgggac cgattttgga
     4741 agaacttgtc tttcgaaaag tgttttttgg tgggctaagt aatgtgacga atattcatgt
     4801 ggccgcagtt attagttcgc ttttctttgg attacttcac ggagatattt ctttcttact
     4861 tacttatttt gtcatcggac taattctttg tttcctttat acgaaaacaa aacggattgt
     4921 tgtttcgatg ggtgcccata ttttaatgaa tacgattgtt ttgcttttga gtcttggaat
     4981 tattggggga taatatgaaa aattcattaa taaagcaaag ttttttatat tttgcacttg
     5041 gtcttgtatt tgtatatttt gttgttgttc gtgtggctga ttatggttat gatgtgcttg
     5101 catgtatact aattatcatg acattaatgg attttggtat tggcatcggt ctgattatca
     5161 ctggacttaa aagacgtaaa aaaaacctgt agaaagtaag tgttgcttac cttctacagg
     5221 tttttttatt ctgttttcgc tggataattt tccaggaaat agattaacgt ttgtaattcc
     5281 gttgtaagat cgatatggtg cacacgaact tgtttcggaa cactgatacg agctggtgta
     5341 aagtttagaa taccttttac atctgcttca attaaacgat caaccgttac ttgcgcttcg
     5401 tcagctggaa ctgtcagaat aactacttcc acaccgtttt cacgaacaat ttcttccata
     5461 tcattcaaat gatagattgg aatatcttgt tgaacactac ctactttcgc tggatctaca
     5521 tcaaatgcag caacgatttt gatattatta tttttcatga aattataatg taataatgct
     5581 gtacctaggt tacctacacc gattagtgca acatttgtct gtttgtcctg gctaagtgtt
     5641 ttgctgaaaa agtcgagtat gtaagaaacg ttatacccgt atcctttctt acctaatgcg
     5701 ccaaagtacg aaaaatcacg tcgaatagtc gctgaatcaa ctttcaccgc ttcacttaat
     5761 tccgcagatg atactcgttc cttacctgac tcatctaagt atttcaagta acgatgatat
     5821 aatggtaagc gttttgctgt cgcttgtgga attttagttg tttcctccat catgccttct
     5881 gtcccttctt cttttaattt tttctgaagt tgaagctatt gtgaactgta cttcctttca
     5941 catgcttgct tatatactat aaacatttca caaggaatgc acaaactttt tgctcatatc
     6001 tttcaagtaa ggttttgtcc cgcaaaatat ccggtgcagt cctcttttta tattctacgc
     6061 taaaatcaca aataatgcga gtgttttcac aatctttttt attcaagctg tcttggctat
     6121 ctcattgcga ttacttagct tttaagataa actagtaggg agaacgttcg aggagagaga
     6181 ttatgatatt attacaagtt cagcaaattt ctaaattctt cggtgcagaa gttattttag
     6241 ataatattaa attagaagtt aaaacaggtg accgaatcgc tctagttggg cgaaatggtg
     6301 caggaaaatc cactttactt aaaattatcg ccggcaaaat gagttatgat ggcggaacta
     6361 tttccaaacc aaaaagtgtg gaaattggct atttggctca aaataccggg ctagaatctt
     6421 ctaaaaccat ttgggatgaa atgcttagtg tattcgattc actgcgcaaa atggaagctg
     6481 atttgcgcaa aatggagctt cgtctcggtg aaccggaact ctataatgat ccagaaaaat
     6541 accaagcact gatgacggat tatgatacgt tacaacatac ttttaaagaa agtggcggct
     6601 atacttacga agcagaaatc cgttctgttt taaatggatt gcgtttttat ccagaagatt
     6661 atgaagtaga aatcgcttct ctaagtggtg gccaaaaaac gcggcttgct ttagccaaat
     6721 tactgcttgc taaacaagat attcttgttc ttgatgagcc caccaaccat ttagatatcg
     6781 aaacactagc gtggctcgag acctatttac aaaattatca tggttcgtta ctcatcgtat
     6841 cccatgaccg ctacttcctt gataaagtcg tgaatcaagt atacgaaatc agccgaacca
     6901 aaattgatca ctacaaagga aattacagtt cattcgttaa tcaaaaacaa gcgaaactag
     6961 aacaaatgtg gaaagagttc gataaacaac aaaaacagat tgccaaacta gaagattttg
     7021 ttgctagaaa tattgtccgc gcatcgacaa caaaacgagc tcagagtaga agaaaacaat
     7081 tagaaaaaat ggatgtgctt ggtcgcccgc aaggtgatga aaaagcagcg cattttggtt
     7141 tccaatttga aaaacaaaca ggtaaagatg ttttaatggt agatcagcta agcattggtt
     7201 acgcaaaaga taagcgcatt gcttccaacc taacgttcga aatgaaacgc caagatagtc
     7261 tcgcgctcgt tggtccaaac ggaatcggca aatcaactct acttaaaacg cttattcgtg
     7321 atatcccagc tttaagtggc gaattccact tcggtgctgg cgtgaaaatt ggctactacg
     7381 atcaagaaca agccaaactg acatccaaca aaactgtttt aatggagcta tgggatgatt
     7441 atccagagtt gaatgaagta aacgttcgta caacacttgg taatttcctt ttttcagatg
     7501 atgatgtatt aaaaaatgtc cagtctttaa gtggtggcga aaaagcgcga cttgcccttg
     7561 ctaagctcac tttacttgaa gccaatgtcc ttattctcga tgaaccgacc aaccatttag
     7621 atattgaaag taaagaagtt ttagaagcag ctttaattga ttttgaaggc acgattctct
     7681 tcgtttccca tgaccgctat tttattaacc gaattgcttc taaaatcgtc gaactagcgc
     7741 ccgaaaaagc gaccgttttc ctaggagatt acgattatta tcaagaaaaa ttagcagaag
     7801 aaaaagaact ggcacgactt gatgccgagg atcgacgcaa aaaaggcgaa caagtggaag
     7861 cgacctcctc tgttcgaaaa ttaaactatc aagaagaaaa agaacaacaa aaacttcttc
     7921 gccaaagaaa acgcaaacta gaagaagtag aaaaatccat ggaagcaacg gacaaaaaga
     7981 ttgccgagct tgaacttcaa ttaacgaacc cagaagtttt ccaagaccat gaaaaagccc
     8041 ttgaaatcac tcaagagcta gacgccgtaa aagctgacgg agagaaatta atggaagaat
     8101 gggaacaaat aagcgaagaa ctggaatcca tgtaatctgc ataaaaaaag gagcaaacaa
     8161 tgaaaaagat tttaattatt tctagttcga ttatcgttgg tttacttgtc attattacta
     8221 tttgcgcaag tttttacttg tatagttatg ctttagctcg tgacaattcc agtatgaatg
     8281 acactgcaac aacagacgaa accactgcca cagccaaact agcaaagaaa aaccgggaag
     8341 aaaatgtggc ttggatggaa aagcaaaatc tcacgcaatg gacagaaacc tcagcagacg
     8401 atttgaaact tgttgctact tatttagcag cagataaacc atctaacaca accatcattt
     8461 tagcccacgg ttatcgcggt aaaagcggta aagtagaaat ggcaggtctt gctcgaatgt
     8521 atcatgaaaa atttggttac aacgttttaa tgcctgatgc tagagcgcac ggcaaaagcg
     8581 aaggtgaaaa tattggattt ggttggcctg aacgcaaaga ttatgtgcag tggattgacc
     8641 aagtaatcga caaaaatggt acggacactc aaatcgcact acatggcgtg tccatgggta
     8701 gctccactgt ccttatgaca agcggcgaaa aactaccaaa acaagtaaaa agtattatcg
     8761 ctgattgcgg ctatacatcg atggacgccg aactttcgta tcaactaaaa gccatgttcc
     8821 acttaccgaa attcccaata atcccaacag ctagtctgat taataaattc aaagaaggtt
     8881 tctttttcag cgaagcaagt gcggttgatg cggtcgctaa aacagacgta cccatttttt
     8941 acatccacgg tgatgctgat gctttcgtcc ctacaaatat ggtagacgaa ctctataaag
     9001 ctaccaatag ctataaagaa aaatggattg tcaaaggagc agaacacggt caagcattca
     9061 cggtagatcc aaagacatac gaagaaaaag tacgccaatt tttaaataaa acgatgtaaa
     9121 aagcagttat cctctaggaa ctagatacta tctgttagga aggaaaaaat tggcaagtaa
     9181 taagtaaatg tgttattata taaatgaaaa gagagccatg cgacaacatg actctctcgc
     9241 aaacaccatt taagatggtg acagcctttt atatgattta tttaaaaacc actagctgtc
     9301 aggcttatga gtggttttta ttttttgtca tttttgctgt tcatgattgt tacgactaag
     9361 actgcaaaag caatcatcag cgtaagactc tcgaaaacag tcacacgttt atcctttcca
     9421 ggtaacgcct aaaaaacaac ataaacacca cctactttct ggatgaaaaa ggctggtgca
     9481 ccaccataaa cttatttgca tcacaattat agcatgcaag tatctttaga aaaagagttg
     9541 gcgcgaaagt tgtattttag aggcataacc agaaaattga gctaataaaa atagactgca
     9601 gcgaaagtaa tagttcactt tcactgcagt ccgaagcgtg cggaacgaaa aatcgcgcgc
     9661 tttttatata tcttccagca ataatcccgg attcgcattc atatcaaaac cactacgttt
     9721 tccttgtaag aaactcacag tccctgcagc agcaatcatt gccgcattgt ctccgcataa
     9781 ggctaatggt ggaataatca gttctgtctc tggaagctct agttttactt cttgaataag
     9841 gcgttctcgt aaaccttggt tcgctgccac gcctcccgca agaagcagtt gtttcacatc
     9901 gtattgttta gcagcacgaa tcgttttgct tactaaaaca tccacaacgc ttgcttgaaa
     9961 actcgccgcc atatcgtttg gatttggctc ctcaccacgc tgccttaaat tatgaagcgt
    10021 gttaataaag gaagacttca atccactaaa actaaaatca aacgaaccct catccatcat
    10081 cgctcttggg aaatgaaacg tatcttcgcc gtctttggca agtttatcaa tttgcacgcc
    10141 gcctgggtat gcgagaccaa gtgtacgtgc cactttatca taagcttcac cagctgcatc
    10201 gtcccttgtc tccccgataa tttcaaactc attatctgct ttcattaaaa ctagttcagt
    10261 atgaccgccg ctgacaacta atgaaagtag cggaaatttg aattcagttt caaaacaatt
    10321 tgcataaata tggccagcaa tatgatgcac gccaactaaa ggtaaattgt gcataaaagc
    10381 gagcgtttta gccgcattca caccgataag cagcgcacca actagacctg gaccttctgt
    10441 cacagctatc ccgtctaaat catccatcgt cacatttgct tgttttaaag cttcttcaat
    10501 cacaagcgta atttgctcca catgatgtct tgatgcgatt tcaggaacta ccccgccaaa
    10561 tcgtttatgg ctctcaattt gagaagccac cacactcgat ataatttcat tgccattttt
    10621 tacaacagaa gcagctgttt catcgcagct agattctatt ccaagaatta atgtattttt
    10681 tttcataagt ccacccacat cactagcgcg tcttctttcg tatccggata atagtttttc
    10741 cgaatggcgc cgtcttgaaa tcctaatttc ttataaagcc cttgtgctac atcgttggat
    10801 acgcgaactt ctaacgtcat ccgaacaact ccacgctctt tcgcaactcg aatcatttct
    10861 cgcaaaagcg cctcaccata atgattccct tgataatctg gatgaatcgc aatattcgta
    10921 atatgtcctt catctaaaac gagccaaaca cccgcataac ctactacttg ttccttatat
    10981 atcgcaagta aataataggc gtattggtta ataataaatt cattccgaaa agctgcttcc
    11041 gtccaaggta ccgtgaatgc tgcattttcg acattcataa tacttttcaa gtcagtcacg
    11101 gttgcttccc gaaataataa ggcttcatcc aaactcactc ggaacccctc gattccaacc
    11161 atttgctctc cgcttctgcc agttttaaat aatcaggaac aaagttgtct gccggttctc
    11221 cgtctaaatt ctctgccagt tttacaagag aactagctcg tgagtaagta taatctgcct
    11281 gcgcaaaaac cgcccgctca ccgaggactt ccgtcacagt cacacaaatt tgttctgtta
    11341 aggttccgac aaataaaatg ggctcctcgc tagacaggaa ttgttctagt aattcagtta
    11401 acgcaatatg tccgtccgcg ataacactct gcatttcacc ttcgcttgct tgataaacgc
    11461 ccgcatatac attactacgg cgcgcatcca tcaacgcgac cacttttcca ggaaagtaca
    11521 aaccattctc tgctaaaagt gccaaagagg aaatcccgac aatcggaatc cctgcatccc
    11581 aagccattgt tttcgcaact gttacaccaa tacgaagccc ggtataagac cctggacctt
    11641 ttgctacagc aatcttttct aagtcagtag gttttactcc acattcttcc atcaaaacag
    11701 caatcgctgg aagcaaccgc acactatgat tttttttcaa attcgttgta tattcgccga
    11761 taacgacacc ttcattaaaa agcgctatcg ccatcgtatc ggaagacgta tccatcccaa
    11821 gtatcatttc ccaaaaacct ccattgcaag ttgctcatat ctttctccaa ctggcttcac
    11881 aaccaattta cgcgtattct catctatatg aaaaagctga atttccaagt attcttctgg
    11941 caaatcttcg cgaacaaact gcgcccactc aaccacgctt acacctgctc cgtagaaata
    12001 ctcctccaaa ccaagttcat ccgccgaagc atcttccaaa cggtacacgt ccatatgata
    12061 aagtggcaag cgtcctttct tatattcacg aatgattgta aatgtcggac ttttaatcat
    12121 ttgcggaatc aaaagacctt caccgagacc tttggtaaaa gtagttttac ccgcgccgag
    12181 atcaccttca agcaaaatca catctccagc tgtcaattgt tcaccaagtt gttttgcgcg
    12241 aagccttgtc tctctttcac ttgtcattat caattcgaat tccattacct cacccgtcca
    12301 tcattttctc tacatatcat accacaaagc cgcgccaaaa taaaaatcaa aaaaacgcaa
    12361 cgacctaagt cgctgcgtct ttcgattgat taataattag ttccacttat atccattccg
    12421 ccatacattt ttgctgttac atctgtgatg attttattta gctcttcgct agaaataact
    12481 tcatcttttg taggaaaatc ttcaattgga acaaattctt ctgcttttgt tttcaccgta
    12541 aagctaatag actcaggagc gctcgcatca gatttatctt ctatttttgt ttgaagagta
    12601 agtgtatcta agctgttctc ttttcctgat tttacagtaa gtttattatt aattaagtac
    12661 gttttatttt cttttaattc tttcgcagca tctgttaaac tcgatttcat ttctgtatac
    12721 gtggaatcaa aatctgttac tgcatctgaa ccttggcttt ctgcaataac tttaagatct
    12781 gcttttactt tttcatcatc cattaattta gctacttggt tcatcaagtt cgcgatatcg
    12841 gcgtttttaa tcgtaacgct aacagtacca tcatccgctt ctttaaaacg atctttttct
    12901 aagcccgtga aataagtatc aactaatttt atcgcttttt tgtttaaatc tttcgtcgct
    12961 gcttcaattt ctttcgtatc tacagctgtt tttgcctctg gttgatctgt taatgaactg
    13021 gttaattctt cagtactaag atatttattt tttagatcag ggtagtcggt gttaatttta
    13081 gaccacatac caccagtcgc ttgatctaaa taactaagta aagaagcatc tggctctaca
    13141 atggttttaa gtggaatata ggcatttccc gttttactat ctactaaaaa atctaaatcc
    13201 attgaaattg gtagtaagtt attcgttgat gttacattga attttgcttc tgatttgttt
    13261 gctttcttgt cagttgatgt tgttacagaa agcttaatgt cttttaaaat ccccatcgtt
    13321 tgagcacttg ggtcggtgct tgaaacattg atatcattta cagcaaaaga agttgtatat
    13381 gtagattgat caggtacatt catcccattt ttcattgttt gaacaaattt accttgtggt
    13441 gtttttgctg ctttttcttc cgcgctttcc ccacaagcgc taattactaa tactaaagct
    13501 aacaaaattg ataataaaat cccttttttc atgattctcc tcctaggtga ttaatacatt
    13561 aaaattaaca cactttaagg tctgaaaaca agagaattta caatagttca ttagtctgac
    13621 acaaattcct ataaaaaaag cgttcctttt agaaaggcac gctcgctttt attttggagt
    13681 cacttttaaa gatgtagcat tttcagatac ttttccaggg gcgggtgaag taatatttga
    13741 accttgtgga aatacagctc taacagtatc ttcctctttg atatcagcaa gtttcattgc
    13801 ttttccagtg gtcgcatttg ttacggcagt attgctactc actgtaatca agacttcact
    13861 tgcgtaattg tttttttcac cactccacgt taatgtccca ttgactgtca actcattatt
    13921 attctctaac aaactagtat ccgttactgt tccgtcaagg actaaagcag gcacttctgc
    13981 ttgattacaa cccgctaaaa atagtaccac tagtaaaacc ggcaatatta cctttttaaa
    14041 acctgtcatc gctctctctc gtcctctctg aagcttatcg ttctttctag catagcattt
    14101 agcagaaata caggcaattg ttttcttgtt tcttaaacaa ttcttataca ccaagcatca
    14161 aaccgagaaa agcagctatt aagccaaaca cataggtaca acctagataa gaaaataata
    14221 cacgataatt cgtcttccat tttaattcca tactttccac tttaaacgta gaaaaagtcg
    14281 tatatcctcc cataaatcct gtacctaaaa aaagttgcca aaccggtcca agagcagagg
    14341 aaacaagaaa acctaataaa aatgaaccag taatattaat aaaaaaagtc gcaaaaggaa
    14401 agtttgtttt ccatttactt ttgaccaata cagaaattcc atatcgtagc atcgcaccaa
    14461 gagccgctcc aaatcctaca agtacgaaat taactaacac gatgctcacc tcgattcaaa
    14521 agcttattgc taagcatccg cccaaacttc accataataa gcccaccaat gaaactagct
    14581 aacacatagc taaccgcaaa taaccatgcg ccactttgca ctagttgaat tgtgtctaca
    14641 ctaaaagccg agaaagtcgt aaacgcgcca ataaaaccag tcccaatccc gttcaaaatt
    14701 accaatgaaa tacgagattt ttctgccaaa aattgcataa gaaaagccaa caaaaaacaa
    14761 cctattaaat taactgctaa tgtcgcagaa ggaaaatccc cgccaccaag ccacaagttc
    14821 attgcatatc ggcacatacc acctaatgcg ccaaaaaccc ctacatataa aaaatacatc
    14881 tccaagaccc cacttcacaa aaaaactacc ctgaaatatt tgtattccgg gcagtcgcct
    14941 ttgtcctatt tctactatac tataacgcaa aacattccaa ttattcaact cactggaagt
    15001 cgaaggatgg tcttcatttt ttctgggtcc actttacgcg gatcactcaa ataaatttcg
    15061 tggtgtttac gaacagcccc tgtatcatta tgaagtcctt ctgtttccat gaattggtgc
    15121 atttccgcga ccgttttcac ttcttcacta aaaggaccaa tatgcatcat ctgcacacat
    15181 tctccttctt caaaacgaac caattttacg tgactcgtat caagatcagg ctttttcttc
    15241 ttagcaacct ctttcgccca ttccaacact tcttcggtga caaagtccgg ttgtctaaga
    15301 atggatgtcc aaagccacgc atctctatcc tttaaatcaa acctctcttc agaccaccaa
    15361 aaaccttcca gcggcggtac aacaaaatcc gtgtaaccat ccagacgcgt ctcgcccatc
    15421 ttgctcattt taatcgtgta cgcaatcgca taaagagact gcactgcttt ttgatacgcc
    15481 tcaccgtccg gatcaccttt cccatccacc atcaaaaaat tcatttccgg aacaaaaata
    15541 cgctctggct tccttttagg cgcgtagaat ttcttctctt cttttttaaa atcaattttc
    15601 ttttcagtca tttgaattcc tcctcgttca tccaattcgg cactatcctt tgaaaattat
    15661 cgtgactagc gaccgtcttt gctgcataat ccatcaactt tttaaaatta cgagattcat
    15721 tttttgctgc ccaattaaca gccgaagtaa tatgcatcgc cgtgtatagc gcgtaaagat
    15781 tccaaaaatc cgtaacttct tctttatcaa tatagcctaa aatatttcct cgtgcaaaag
    15841 gtatactgac ctctgttgta aaaaagccga ttttagctag atcaaataaa ggatcgccga
    15901 actctaaccg attaaaatca attagcccca caaacttttt gttgtttaaa ataatattcg
    15961 ctggatgaaa atctccatgt tgtaaacaaa tcggtctatt ttttaatcta gctatattct
    16021 cattaacaaa cttttcggtg tctgttaaaa aagaagctgt tatttctaat tcttttaatt
    16081 ccttcacttt tcgttcaaat ttaaccgttt gaaaatccaa ccagttcatt tttggtatag
    16141 caagcggaat tttatgaact tctcgtaaaa tttcccctgc tgaaaaacca gcttttaact
    16201 gttctgaatg agataaacgg gtcatgccaa tttctgcgtc ttcgcctcgc aaataactaa
    16261 taatcatata gccttctctt tcgataaagc cgaaatcata tgcttttgga acaaatggag
    16321 tttgagaatc taatgcttgg attattttaa actcttgctc ccgttcttga agtaaatcta
    16381 taggaaaaac acgaacaagg taagtttcat ccacctggta tttcctatca acagaaaagc
    16441 ctttgtttat ttccgaaatc actttcgcat tatgcaacat ttttagttgt gtcacatcca
    16501 taatcagctc tcctcctata aattcactat tcttcattat acaagaatac gcttactttt
    16561 ttccaattat cttcgtagaa tttgttgaca aaataacaga atcaatatta taattagttt
    16621 tgctacgcat acgcggtcgt ggcggaatcg gcagacgcgc taggttgagg gcctagtggg
    16681 gtaaaacccg tggaggttca agtcctctcg gccgcatcaa taaaaaaatt ccaaggttag
    16741 aagctaacct tggaattttt ttgtattttt aatatcttct ataaacaaat aacccgctaa
    16801 ctacgacaat aagcaatcct ataaaaattg ttgagctatt tgaactatcg cccgtttgtg
    16861 gtagagcagt aatttttgtc gtttctccac ttaccttcac cactgtactt ccctttgttg
    16921 gagtcggttt tttaggtacc attattttat tatcactaaa agaaatatta atagtttttt
    16981 gagggttaaa tggtatcgtt acgcgaattt ctttggttga tttttcatag ccaggtggtg
    17041 ctgttgcttc cgttatgaca taagttccgg gttgtaagtt ttcagcaaga gcataacctt
    17101 tactatttgt agttactttt tttaatgtcg ttccatctgt tgactttacg tcgaaaacgg
    17161 catttgctag acctttttta ttcgcttcat cttgtttaaa aatagtaatt gatcctgttt
    17221 tctcaacgtt ttgaaaagtg agtttgacag gatttgtatc gccgtacgtg atagtgaatg
    17281 tttttggtgt tgggttcttc tgataaccaa gaggtgctgt aacttcggtt gctgtatact
    17341 tccctggtgg cagcccttcc gctgtccctg taccattttg accagtcgtt attttcgcca
    17401 cttctgattg agaattatct ttaatggcat aaaccgctcc actcagcgcc ttatctcctg
    17461 aaaatttttg aatttcgact ttaccattcg tcgttattcc cgcatccata tcaaaattct
    17521 cactttttaa attaggtaca tttactgaag ctatccctgt tttatctggc ttggaattaa
    17581 gcgtcgtatc attgccttga tttgcttttg aaaaaataaa atcattattc ggtagggtaa
    17641 atttcacttg atagtccccc ggcaaaacat ctgtgaataa ataagagccg atattattcg
    17701 tggtcgcact ttctttaaac acaccatctt tcgttaataa atctaccttt acgaaaggag
    17761 caggttcttc gctatcttgt tgaataccat ccccattaaa atcgtaccaa acaacatcgc
    17821 caatttttgc gccatttaca ttaatataca actgaatatc atccaaaaaa tttccgctgg
    17881 taagtgagcc acttgctgtt gaaataggat tgaaagttag ccttgtgata gtctgtcctt
    17941 caggcactat ataattccct tcaaaactcc cccatgtttc tccatcagaa actcgcgaca
    18001 cttcggtttg actttctggt gagccaataa gtaaatcagc cgtgtctacc cccatgcgcc
    18061 cccggtgtga gaacttccaa gttaaattgg aacctgggat tgtccgaatg tcttgataaa
    18121 ctggaccaat accatccgag tttaattcaa taaaattgtt tccagaaaaa gcaggcacat
    18181 tgtatccatt accattttgc catacttcaa tattcccagt tggattagtt gttccccagg
    18241 cctctacacc tttttgattt acttgccaaa catttgtcgt accagcatct acaccataat
    18301 cctcgatatc aacatcttca aaatcattat ttttaatggc ccattttaat tgccaaccat
    18361 ttgaagatgt tggagaagct tgcacttttt cagaagtgct cccaataata agtaagacaa
    18421 ttagaataaa caaactacct attaattttt tttgcatgct ttctccccct ttttcgccct
    18481 aaacctaaca cctttaatta cccgcaaaaa agcaaaagaa aacagccagt ataacaacta
    18541 gctgtttcta atattaagac aaaatatcgt atgccatttt atatttcgtt gatttggcga
    18601 aatgtttact tgcatgcttt ttcactcgtt caattaatgc tggatcattt gatgcgttaa
    18661 tttttttcag taattgtatc attttctttt cataacttac ttgctcatcc tgttgatata
    18721 aaagcaatat ttcggtgtat tccataaagt aattcagttc ttgtactcgc tcaactactg
    18781 tattcatcag ccccattaat gaagttgctt cttcaacaaa acctttttcc gcaaaaataa
    18841 ccatcagttc tgttataact aggtaatcgt tgttgttaaa gcttatatta gtcgttttgt
    18901 aggccattat ttctttatac aaacaggtta ttttttcata aaatagcgtc tcatttccct
    18961 caatattttc aatttctgcc atttttaact gaacgacgaa ataatagatt tttttagctt
    19021 ctggatattt ggaaaagtac ttttgtgctt gtttaaatct gtattttgcc tcaccaataa
    19081 agccaatttg aaaataaatg taaccgtaga aataaagaat agagacaaaa cgttcctgct
    19141 cttcatcctt tattaaatcc cacgcttgct ggatatgtcc aagtgcaggt tcataaatac
    19201 tttggcaaat ataattaatg cagatgcaca catgaaaaac agtgagaaaa tttttattat
    19261 cagtgagagc aacacacttt tcccagtact ccactgctaa ttgataatta cacgttgcat
    19321 gagaatgttt tactgcctga ccgtaataat agtaggaaag caattggggc gggaaagcat
    19381 tttccactcg tttttctgcg ttctttaaat atttagcttc cacttcttcc gctcttgaaa
    19441 atttccaagt cttataataa aatgccacct gtaaacaata aaagctaagt tcgacagctg
    19501 gtgattcgtg ctgcagctct acattttccg ctattttctt taatctactt tctatttctt
    19561 taggattaga acaaaccaat agtttaaaaa tctcatccaa ttctttcaaa agtgctctat
    19621 tctcttcatc ttcgctcatc aataacactt cttccggtat ttctaacctt cttgctatgt
    19681 gtatcaacgt ttccaaagaa gcaactttaa taccattttc tatatttgct aaataaggca
    19741 cagagataat tccttgcgct acgtctttta atgtcagctg tttctcttta cgaatatttt
    19801 taattcgcaa accgattaag ttcatgatgt caccgccgtt ttttcaatat tttcctctta
    19861 attataaaca tttcgaaatg gaaaacaact actttttcca gctacttttt tgctttcatt
    19921 tttatatttt ctaaaaaagc ttgttaaatt agctttttta aactactaac ctaaagcgtt
    19981 cgcccttaca tagaaaacgt tttagatcaa aaaaagcatg attgctcttg gacctaaaac
    20041 gttttgttat atttgctcct gtatagctat tttgaaaaaa gcttcactaa tttgccataa
    20101 tcatcgctgt ggattttttg ttgtccggca taggtgaaat aaaaattttc cttttgaatt
    20161 cctaaatttc acctaatacc gacattttat tacttcttag tttgctccca catgcaaact
    20221 actccgttaa taaaacaaca agttttatag actctatccc ttatcgaatc tataaatttt
    20281 ctctacacat tcccttttaa aacctgtcta cgcaaaaacg gaaacgtaga ttttcatttt
    20341 accattcaaa ttcaatttat ctctaaaaag gaaaattcat cttacttcca cctttttcaa
    20401 gtccatattt agtattaatt tcctaaaaag acgaagatat catctatctt tgtctcattt
    20461 ttatttaaat agaatatgtt ttttcttcat atagaatatg atggatgctg ctacaatcat
    20521 ttctgaaatt ggaattgcta gccaaacgcc cgggatacca atgattggtg gcaacactaa
    20581 taggaagatg accatgaaaa taatctcacg cgatatcgtt atccatgtag ccatttttac
    20641 cttgtccgat gtttggaaat aggtcatcat aacaaagttg aagcccatga acagataagc
    20701 tgtatagaat aatttgatac cgttacttgc taaatcttta atttccgggc taaagttccc
    20761 gaacatcgaa acgagcaagt tggaaccgaa gagaccaacg agcaaaaagc ctactccagt
    20821 gctgaacgct accataatcg caattttcaa cgtttctatt tctttttgtc tagctttcgc
    20881 gccccgataa taactaataa gtggttgaat cgcggacccc attccaagga acagcatcaa
    20941 aatcacactg tgcgtataat tgagtaccga gaacgccgcc acaccagcag tcccagcaat
    21001 agccgcaatc gaaatattat aacctagcgt aaatacagac accccaactt ccgctaaaaa
    21061 gctcggtaag ccaattgcta aagttttctt aaaaaacgct ttgttccagt ccactttgac
    21121 aaattttaaa cgacttgatt ttttgaagaa atgggtaatt aaaatgagta caccgataat
    21181 gattgcaatc atcgtagcaa gcgcagaacc cgtaacgccc cattcgaata caaataagaa
    21241 taaatagttc aaaataacat tactgattgc tgttacaata agcgcaatca tcgataaatt
    21301 aggatcgcca tcgttacgta caaaaatact taaaatattt tctagtgtaa gcgcaaatcc
    21361 aaatacgagc aggatattca tatactcgag cacataacca atcgtatcat cattcgcacc
    21421 taaaaaataa gctaatggta ctttaaaaat aaacgctata attccaataa taacagtgat
    21481 tgaaacaaca gctagaatcg cattggtgaa aatcgtttga gctttcgcga catttttctc
    21541 cccgatcgca aaggaaaatt gagtcgcagc accaatccca atccaaatag aaatcgctgt
    21601 aaaaatcgta aatacaggca ccgctatatt tatcccagcc agcgccactc cgccgagctt
    21661 atgcccaaca aaaattccat caatcacaat atttaaagac attaacaaca ttcccactaa
    21721 ggaaggaatt aaatatctaa agtaaatctt tttaactgaa tctgtttcta aaatttccat
    21781 attttttgcc atactacacc tctaattcaa agcttttagc gtaattcctc tccagaaaat
    21841 ttgccataaa gctgtgattt tcttttccgt tctttctggg tcgttcacgt acacaatgtc
    21901 tacgataact gcgtcgagaa ttcccatata agcttctttc atcgtttcca catcttgcat
    21961 tggaattaac ttttgctcca tccaattgct aaataaatta gtaaattcat gttccatttg
    22021 tagcacgttc tcggtaatat ctgcttggac cacttcatac aaatgcttcg gcggataaaa
    22081 cccgtaacgc aaccaaaatt gataggcctc gtccgtatcg tataattcct tcacaccaaa
    22141 aagtaaacta gacaaaacaa gatctggtct ggataaatca ctatcccgaa gttttgcccg
    22201 gtagtaatct atttctgttg atttcgcgtc cttcataatg gataaaaaca aatcatcttt
    22261 atctttaaaa tgagaataga tggattgttt cttcagcccc acaacccctg caatatcagc
    22321 aagcgatgtt ccttcaaaac cgttattagc aaaaagtgtc agtgcagctt gtttgatttc
    22381 ttcttttctc atcattccac tcctctcgca aaaactgacg accgttcgta agtcattctc
    22441 tcacgaaaaa atttctttgt caacaaaaaa atccactcta ataaaagagt ggattcatgg
    22501 atttattttt cttctaaaaa ctcgctaatc aattcgtatg tctcatcggt cgcttctgag
    22561 ttagttgtca tgaagccatg tggaactttt tcaaagcgtt tggcaaatac ttctacgccg
    22621 gcgtctttta atttcttcgc atatgcttcc ccttgatctc taagtggatc aaattcagca
    22681 gtcgcaataa atgtttttgg aagtccgact aaatctttgc tacgtattgg tgcaacgagt
    22741 ggatcgtatt tacgatcgct tgcattcgca atatataatt taaagaattt atctaatgat
    22801 tctttcgtaa gcacgtagcc ttctgcaaat tcatccattg aaggataaag aacagacgca
    22861 tcacgactga aaatatctgt cgctggataa agtaaaattt gagcagtgat atttggttta
    22921 ccttttgatt tagcaatttg agtcacaacg gttgctaagt ttcctcctac gctatctcct
    22981 gcaacgataa tgtctgagga tttagctcgc aagctagtac gatgattttg aacccatagt
    23041 agcgcggcat aggcatcttc cactgctgct gggaatggat tttctggagc aagtcggtaa
    23101 tcaacagtaa caacgcgagc gcctgttgtt tgaacaagtt ttctggcaat cgcgtcatgc
    23161 gtttgcagtc cgcctagaac aaatccgcca ccatgatagt aaacgataat ttcaaaaggt
    23221 ccgtcttctt gcggcgtata aattctaatt ggaattttgc cagccgggcc atcaattttt
    23281 ttattttcaa catcgccaat ttcgatatct tttgctgaag gtaatgcttt tgtcgctagt
    23341 ctcatatatt tatatcgcga atctacgtcg gataacggtg aagtgttttt cacaaatttc
    23401 tgtgaagctt catctaaatt ctccagtacc tcgggattat attctttttt cccaaccgct
    23461 tttttgtaaa taaagaaaac gattaataat ggaagtagaa tgatcccagc aaaaccgata
    23521 gcgatccatt ttattgtatt tttcacattc gctcaactcc ttcaatataa cttcattaac
    23581 aagtatagc
//
LOCUS       DASDYO010000031        23409 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.031, whole genome shotgun sequence.
ACCESSION   DASDYO010000031 DASDYO010000000
VERSION     DASDYO010000031.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 23409)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23409)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23409
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.031"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..509)
                     /locus_tag="U0290_001069"
     CDS             complement(<1..509)
                     /locus_tag="U0290_001069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEM2301114.1"
                     /translation="MIYFLLAIYSAVFMSFIQVAGECFPVKKSFLFRFSECNFCQKTL
                     AFYHIIPVFSFLFFRGKSRCCERPIPIIYFLMELVTPIYILLLYIQFSFSYSFLLYYI
                     IYFFLAFFFITDIFYLYVPNSILIVFFCVLAIIAILYNQTLMDFIFSGVISCLFYLLF
                     FIIFRKGIGL"
     gene            complement(721..2010)
                     /locus_tag="U0290_001070"
     CDS             complement(721..2010)
                     /locus_tag="U0290_001070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional folylpolyglutamate
                     synthase/dihydrofolate synthase"
                     /protein_id="HEM2301115.1"
                     /translation="MTLNSYEEALDWIHGTLRLGIKPGLARMEYMMEKLNHPEKANKW
                     VHIAGTNGKGSTLTFVRNALEEAGYRTGTFTSPYIEVFNERISINGEPISDEMIVSLA
                     NRIKPIAEELEKTIYGPPSEFEIITAMMFLCFAEYVSIDIGIIEVGLGGRLDSTNILV
                     PLISVITTIGMDHMEFLGDTIEQIASEKAGIIKPGIPVVSGAIQKEAQEVIAKIAKKN
                     KSNVAQLNETFFMHNENGNITYKTIYGEEISNLSIGLLGLHQLNNAAVAIKVLQYLNT
                     FSTFEIGLAAIKKGLEKAFWPGRMEKIISNPFIMLDGAHNPEGIKTFAHSIQKYSGPK
                     KIIVSILADKNYQEMLGMLKSIPNTEIILTTFDYPRAMMAEEVIQIGKNEGISLNPDW
                     QQVLGNLYETETNTKIFITGSLYFISEVRKYLLASKR"
     gene            complement(2072..4723)
                     /locus_tag="U0290_001071"
     CDS             complement(2072..4723)
                     /locus_tag="U0290_001071"
                     /EC_number="6.1.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="valine--tRNA ligase"
                     /protein_id="HEM2301116.1"
                     /translation="MTIEHNEINMPTKYEPSNVEAGKYKWWLEKEFFKAEGNTDKKPY
                     SIVIPPPNVTGKLHLGHAWDTTLQDIITRMKRMQGFDTLYLPGMDHAGIATQAKVEAK
                     LKESNVSRYDLGRENFVDKTWEWKEEYAEFIREQWEKLGLGLDYSRERFTLDDGLSDA
                     VKKVFVTLYNKGLIYRGQYIINWDPEAKTALSDIEVIHKDIEGSFYHLKYPLTDGSGY
                     LEVATTRPETIPGDTAVAVHPKDERYQHLIGKTIMLPILNREIPIVADEYVEREFGSG
                     AVKITPAHDPNDFEVGNRHELPRIIVMHEDGTMNKNAGKYDGLDRFVARKEIIQDFKD
                     LGLFIKQEPHLHSVGHSERTGAVVEPYLSLQWFVKMEPLAAEALELQKTENKVNFVPA
                     RFEKTYETWMDNIHDWCISRQLWWGHRIPAWYHKETGEIYVGESEPENLSEWEQDEDV
                     LDTWFSSALWPFSTMGWPDTENPDFQHFFPTNTLVTGYDIIFFWVSRMIFQSVEFTGE
                     RPFKDTLIHGLVRDSEGRKMSKSLGNGVDPIEVIDKYGADSLRYTLATGSSPGQDLKF
                     SYEKVESTWNFINKIWNASRFVLMNLDGMKYNEIDLSNVTEVSDKWILTRLNETIQAV
                     TSLGEKYEFGEVGRTLYNFIWDDFCDWYIEIAKIPLYGEDEVAKQTTRSVLAYTLNAT
                     MRLLHPFMPFVTEEIWQNLPHEGESITIAEWPKVNEQQIDTKSSTAMATLVEVIRAVR
                     NIRSEVNTPLSKPIVLEIKPKDTTYKEILEQNISYIERFCNPEQVTISFDVEASKTAM
                     TAVVSGAEIFIPLEALIDLNVEIARLEKELEKWNKEVARVQGKLNNERFISKAPESVV
                     AEERLKEKDYLDKKASVLERIETLKEV"
     misc_binding    complement(4772..4999)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(5047..6336)
                     /gene="hemL"
                     /locus_tag="U0290_001072"
     CDS             complement(5047..6336)
                     /gene="hemL"
                     /locus_tag="U0290_001072"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEM2301117.1"
                     /translation="MQNYSKSEKAFKEAKKVLPGGVNSPVRAFNSVDASPVFMDHGKG
                     AYITDVDGNEYIDYVLSWGPLILGHADPAVVNAITKAALKGTSFGTPTEIETELAKLV
                     IERVPSIEIVRMVSSGTEATMSAIRLARGYTKREKILKFEGSYHGHGDSLLIKAGSGV
                     ATLGLPDSPGVTKGLAADTITVPYNDIEGAELAFQKYGEEIAAVIVEPVAGNMGVVPP
                     IDGFLEGLRELTTKFGSLLIFDEVMTGFRVDYYSAQGYYVVTPDLTCLGKVIGGGLPV
                     GAYGGKKEIMEQIAPAGSIYQAGTLSGNPLAMNAGFETVRQLTPQHYDVFRTLIKRME
                     EGLTEISARRQVPLSINKAGSMFGFFFTDQKVINFDTAKTSNLEFFRNYYREMLGQGI
                     FLPPSQFEGVFISTMHTEKEIDKTLEAFDTTCKILRG"
     gene            complement(6349..7323)
                     /gene="hemB"
                     /locus_tag="U0290_001073"
     CDS             complement(6349..7323)
                     /gene="hemB"
                     /locus_tag="U0290_001073"
                     /EC_number="4.2.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="porphobilinogen synthase"
                     /protein_id="HEM2301118.1"
                     /translation="MKNQFDRHRRLRKTKTMRDLVRETVLHTDDLIYPIFVKDGKEPK
                     TEVASMPGVFQYPLHELEEEMRVVESLGIKAVILFGIPAEKDAVGTQAYHDHGIIQEA
                     TRLIKKSFPEILVVADTCLCEFTDHGHCGVIENGEILNDESLELLKQTAVSQAAAGAD
                     IIAPSNMMDGFVQVIREGLDEAGFYDIPIMSYAVKYASAFYGPFRDAAGSAPQFGDRK
                     SYQMDPANREEALREAMSDEQEGADFLIVKPSLSYLDIMRDVKNNTNLPVVAYNVSGE
                     YAMVKAAAQNGWIDEEKIVLEMLTSMKRAGATLIITYFAKDASKYLNK"
     gene            complement(7320..8042)
                     /locus_tag="U0290_001074"
     CDS             complement(7320..8042)
                     /locus_tag="U0290_001074"
                     /EC_number="4.2.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen-III synthase"
                     /protein_id="HEM2301119.1"
                     /translation="MSKKVVLTREANKNKPWQTYFSQNGFEVTSIPLIKTRPIKMDLS
                     REQQQTDWLFLTSANAVEYFFTNQHERFNYKIAVIGEKTKEKLAEFGHEPNFVPSIYQ
                     SEVFLEEWLNENPEKTSILIPQSNLSRTIIKDRLIEKGYIVVSFELYETIFPENSKIR
                     LIEQLKLNETQIIVFASPSAWKNFYSTAKSFPAQKEKWHIASIGSITTEAIIADGWEV
                     KYQPKTFTMKHLADLIIQEELK"
     gene            complement(8039..8968)
                     /gene="hemC"
                     /locus_tag="U0290_001075"
     CDS             complement(8039..8968)
                     /gene="hemC"
                     /locus_tag="U0290_001075"
                     /EC_number="2.5.1.61"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylbilane synthase"
                     /protein_id="HEM2301120.1"
                     /translation="MKRKIIVGSRRSKLALTQSNWVINKLKENYPEFDFEIKEIVTKG
                     DRILDVTLSKVGGKGLFVSEVEQALSDEVIDFAVHSMKDVPSSLKEGLIIGAIPKRES
                     PLDCFVFNRVNSLDELPQGSVIGTSSLRRAAQLLKHRPDFVIKPIRGNIDTRLQKLHA
                     ENFDAIILAKAGLARMGWLENTTLKLEDIPPELCLPAVGQGALAIECRESDQQIRDML
                     TSIHHEETGICVEAERVFLKKLNGGCEIPIAGFATRANEVVHFKGLVGNADGSIILAS
                     EQAGANPSEIGNKVAEDLLSEGADTIIKELRNI"
     gene            complement(8972..10279)
                     /locus_tag="U0290_001076"
     CDS             complement(8972..10279)
                     /locus_tag="U0290_001076"
                     /EC_number="1.2.1.70"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamyl-tRNA reductase"
                     /protein_id="HEM2301121.1"
                     /translation="MFILTMGLNHHTAPIDIREKLVFKESEEEMALVTLQQEKSILEN
                     VIISTCNRTEIVAVVDQIHTGRYYLKRFMANWFQMDMEKIEPYLFFHEESDAVNHLYK
                     VTAGLDSLVLGETQILGQVKHAFEIAKQTATTGTLLNKLFREVVTFAKKVHHHTKINE
                     NAVSVSYAAVEVAKKLYGSLDNKKIVLVGAGEMSELALQNLAGSGIADITIINRTKSN
                     AELLANQFQAKVGAYENMNEHLMLADIVLVSTSAAEPIIKQAAMQDLMEQKASSMLVI
                     DIGLPRNVEHDCSYIPNFHLYDIDDLAGVVSANSLERQRIVLELEKTIEAEVRNFFEW
                     EKQLGVVPVIRALREKALDMQEVTMTSLENKLPGLTEREYIQIGKHMKSIINQMLKQP
                     ISELKEMSVEEDATTSIEHFKRIFGLSETDVTVIEKEQAETRS"
     gene            complement(10407..10991)
                     /locus_tag="U0290_001077"
     CDS             complement(10407..10991)
                     /locus_tag="U0290_001077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihA family ribosome biogenesis GTP-binding
                     protein"
                     /protein_id="HEM2301122.1"
                     /translation="MDVNNVELIISAVRPEQYPETDLPEYALAGRSNVGKSSFINTMI
                     RRKSMARISQKPGKTQTLNFYKIEEALFFVDVPGYGFAKVSKTEREKWGVMIETYITS
                     REQLRGVIQIVDLRHKPTEDDRMMYEFLKYYDIPVIVVATKADKIPRSKWQKNAKIVR
                     ETLDFDPDDKFVLFSSETKMGKDEAWQFIKEGME"
     gene            complement(11099..13021)
                     /gene="thrS"
                     /locus_tag="U0290_001078"
     CDS             complement(11099..13021)
                     /gene="thrS"
                     /locus_tag="U0290_001078"
                     /EC_number="6.1.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine--tRNA ligase"
                     /protein_id="HEM2301123.1"
                     /translation="MKITFPDGAVKEFEPGVSTADIAASISPGLKKKALAGKLNGELL
                     DLVTPIHEDGAIEIVTPDHEDALGILRHSTAHLMAQALKRLYPDVKFGVGPAIESGFY
                     YDIDTEAVISDESLVEIEKEMQKIVRENVPIEREVVSREEAIKRFKAIGDQYKLELIE
                     AIPEDETVTIYTQGEFFDLCRGVHVPSTGKIQVFKLLSVAGAYWRGDSNNKMLQRIYG
                     TAFFDKNGLKEFIQMQKEAKERDHRKLGKELDLFANSIEVGQGLPLWLPKGATIRRVI
                     ERYIVDKEERLGYNHVYTPIMANVELYKTSGHWDHYHEDMFPTMKMDNEELVLRPMNC
                     PHHMMIYKNDIHSYRELPIRIAELGMMHRYEMSGALSGLQRVRGMTLNDAHVFVRPDQ
                     IKDEFKRVVELILEVYKDFDIKDYSFRLSYRDPKNTEKYFDDDAMWEKAQAMLKSAMD
                     EMEMDYFEAEGEAAFYGPKLDVQVKTAIGKEETLSTVQLDFLLPERFDLTYIGEDGEK
                     HRPVVIHRGVVSTMERFVAYLIEEYKGAFPTWLAPVQMELIPVNADAHLDYAKGVQDK
                     LQRAGLRAEVDDRNEKLGYKIREAQTKKIPYALVLGDQEVEAGSVNVRRYGSKDSETM
                     DLDAFIAQVVAEVSKY"
     misc_binding    complement(13090..13320)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(13371..14294)
                     /gene="dnaI"
                     /locus_tag="U0290_001079"
     CDS             complement(13371..14294)
                     /gene="dnaI"
                     /locus_tag="U0290_001079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="primosomal protein DnaI"
                     /protein_id="HEM2301124.1"
                     /translation="MDNIERTLGQLFEGRDFEKEYQGLKQQVLHYQPIQDFFKEHKEE
                     VTEQLVNQNLSNLYEFMTQHKKFTEQEETIMPGYAPKLVLNGEFITVTYYPTKEKIEE
                     DKRRAVERRIRSLYMPKQVVDANLADFYTDEESRQLALVEAYQFLNNYPPKSGERVKG
                     LFIHGSFGTGKSYLLGALAKELALKGISTTLVYLPEFMREVKQSISDNTVGEKIQFAK
                     ETEVLMLDDIGAESMTAWTRDEVLGAILQFRMQEELPTFFSSNYNMDQLENHLMFAQN
                     GTEEKLKARRIMERVRYLSKEVNLEGKNRRF"
     gene            complement(14304..15680)
                     /locus_tag="U0290_001080"
     CDS             complement(14304..15680)
                     /locus_tag="U0290_001080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication initiation and membrane attachment
                     family protein"
                     /protein_id="HEM2301125.1"
                     /translation="MTEFWMELQAVDSYQVKASGILTGADRKIITMLYQPLMGAECLA
                     LYQTLFTEVEENRLWSEAHSHVQLLNMLDISLKALFEARLKLEGLGLLKSYVKTENDQ
                     RFYIYEILPPLSPEKFFSDGLLNIYLYSKIGNAQFQRLRRFFADEAFDTATYSEITRS
                     FQDVFEPFKGGSSAVTTETSQKLLDKVTPKEIEFDDASFDFNLFLSLLSPGMIAREKI
                     TKEVRQTILKLHGIYQVSEKDMPSYLYRALDANGEIDIVYLRKIVREGYTIEHGAPPK
                     LQMKQETPVDKEPEESLNDEEALQVYLESITPFQLLVDISDGAVPAETDLRVVEEVMN
                     QQNLPVPVMNVLIEYVLLRLDRKLSKNYMMTIAAHWKRKNVKTAKEAMDLAWQEHEKY
                     KRLQEEPATPKTNNYNRNYQKTTRKEILPDWFDKEQVAPAENKMTDKEKQTLEEQVRE
                     IKERLNKR"
     gene            complement(15686..16150)
                     /gene="nrdR"
                     /locus_tag="U0290_001081"
     CDS             complement(15686..16150)
                     /gene="nrdR"
                     /locus_tag="U0290_001081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator NrdR"
                     /protein_id="HEM2301126.1"
                     /translation="MRCPTCQYNGTRVVDSRPADDGNSIRRRRECEKCGFRFTTFEKV
                     EESPLIVVKKDGAREEFAREKVRRGLIRACEKRPVSAEQIEEIVNEVERELRNIGDSE
                     IASDLIGEKVMNKLANLDEVAYVRFASVYRQFKDISVFVEELKDLMEKNKDR"
     gene            complement(16228..16830)
                     /locus_tag="U0290_001082"
     CDS             complement(16228..16830)
                     /locus_tag="U0290_001082"
                     /EC_number="2.7.1.24"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dephospho-CoA kinase"
                     /protein_id="HEM2301127.1"
                     /translation="MGKTIGLTGSVATGKSTVSNMIQQAGIPLVDADIAARKVVERGT
                     EGLKEIVAYFGEEILLADGTLNRAKLGEIIFKDKEKREKLNEITHPRVKDYMLEARER
                     FFEAGEELVFFDIPLLFESHLESLVDKIVVVWTTPETELKRLMERNNLTKEDALRRIE
                     SQMGIDEKARKADFVIDNNESLEKTQKQVLTFIKRFVKNK"
     gene            complement(16847..17668)
                     /gene="mutM"
                     /locus_tag="U0290_001083"
     CDS             complement(16847..17668)
                     /gene="mutM"
                     /locus_tag="U0290_001083"
                     /EC_number="3.2.2.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-formamidopyrimidine glycosylase"
                     /protein_id="HEM2301128.1"
                     /translation="MPEMPEVENVRATLQELVPGKKIDQVIVRVPKMIVSTPPDEFVH
                     MLVGQEIEGVRRRGKFLLFDLTNCTILSHLRMEGKFRLMDEKEEVSKHTHIIFHFEDH
                     TELRFLDVRKFGTMEVTNKYGEGETRSIKKLGPEPLTQAFTSTDFATGVKKTSRAIKT
                     ALLDQKLVAGVGNIYADEICFEAKVRPERAANSLSDKEIKRIFEATKSIMTEAVALGG
                     STVRTYVNSQGKLGQYQDKLKVYGKTDEPCVVCGKPIEKIKLNGRGTHFCPNCQK"
     gene            complement(17692..20319)
                     /gene="polA"
                     /locus_tag="U0290_001084"
     CDS             complement(17692..20319)
                     /gene="polA"
                     /locus_tag="U0290_001084"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase I"
                     /protein_id="HEM2301129.1"
                     /translation="MNKLVLIDGNSIANRAFYALPLLNNDKGVYTNAVYGFAMMLMNV
                     LEKEKPSHVLVAFDAGKTTFRHTTFKGYKGGRQKTPSELSEQFPFIRELLTAYDIPQY
                     ELANYEADDIIGTLTKKAEADGMEVAIITGDRDLTQLASEKTTVYITKKGIADMETNT
                     PETLKEKYNLTPQQIIDMKGLMGDSSDNIPGIPGVGEKTALKLLHEFGGTVESVLEHA
                     EEISGKKLKEKVLENKELAILSKELATINVDSPIECTVESTKYDGYQTEKVIPLLKEM
                     NFTTLLKNIEGDTPEETKELKELSFEIVTELKEKHFGGKTALYVELENDNYHTANFIG
                     LTVHSSQGTYFFTKETAESSEVFRKWVESDQTKVVYDAKKTMVAMNRIGLAISGITFD
                     IMLASYLLNPSDSIDDFTSVAIRHDYTEVETDEAVYGKGAKRSTPEESIVAAHLARKA
                     VAIADLEKRLVDDLEENEQLALMEDLELPLTFVLAEMEMQGVSVDTERLENMKVELAG
                     RLKTLEESIHSLAGEEFNINSPKQLGVILFEKLGLPAVKKTKTGYSTAADVLESLSGK
                     HAIIDEILLYRQLGKIQSTYIEGLLKVTDKETHKVHTRFNQTLTQTGRLSSVDPNLQN
                     IPIRLEEGRKIRQVFVPSKPGWKMFSADYSQVELRVLAHISEDENLIYAFKHDYDIHT
                     KTAMDVFHVEQDEVDSLMRRQAKAVNFGIVYGISDYGLSQNLGITRKEAKDFIDRYFV
                     SYPAVKEYMQDIVRFAKEKGYVETILHRRRYIPEIVSRNFNVRGFAERTAMNTPIQGS
                     AADIIKKAMILMSERLVSEKLEAKLLLQVHDELIFEAPEAEIAKLEEIVPDVMENAVE
                     LSVPLKVDSAFGDTWYDAK"
     gene            complement(20484..21746)
                     /gene="icd"
                     /locus_tag="U0290_001085"
     CDS             complement(20484..21746)
                     /gene="icd"
                     /locus_tag="U0290_001085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent isocitrate dehydrogenase"
                     /protein_id="HEM2301130.1"
                     /translation="MSQKIQVENGVLKTPNNPVIPFIEGDGTGSDIWAAAKRVLDAAV
                     KKAYNGEKEIAWKEVLAGEKAFKQTGEWLPQATLDTIDEYLIAIKGPLTTPIGGGIRS
                     LNVALRQELDLYVCLRPVRYFKGVPSPVKRPEDTDMVIFRENTEDIYAGIEFKEGSEE
                     SKKLIDFLKSEFGVDKIRFPETSGIGIKPISKEGTERLVRSAIEYAIKEGRKSLTLVH
                     KGNIMKFTEGAFKNWGYDLCEREYGDKVFTWNEYDRIKEAEGTEVADAKQKEALAAGK
                     ILVKDSIADIFLQQILTRPAEFDVVATMNLNGDYISDALAAQVGGIGIAPGANINYLT
                     GHAIFEATHGTAPKYAGLDKVNPSSVILSGTLLLEHIGWGEAAALINQSMEKTIAAKT
                     VTYDFARLMDGATEVKCSEFADELIKNF"
     gene            complement(21766..22887)
                     /gene="citZ"
                     /locus_tag="U0290_001086"
     CDS             complement(21766..22887)
                     /gene="citZ"
                     /locus_tag="U0290_001086"
                     /EC_number="2.3.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="citrate synthase"
                     /protein_id="HEM2301131.1"
                     /translation="MTLSKGLENVYVAETSISSIIDDMLTYVGYGIDDLMENNASFEE
                     VIYLLWHLRLPNKDEFKKFKREIQENMAVSETIITSLRMQNHQKLHPMSVLRTTVSML
                     GVFDTEAELDDGEAVYRKGLRLQAKMPTIVAAFSRIRRGLDPIPPREDLNMAANFLYM
                     ITGEEADALSVEAMNKALVLHADHEFNASTFTARVCVATLSDVYSGVTAAIGALKGPL
                     HGGANERVFDMLEEIDQAGDVRNYIQEKIDTKQKIMGFGHRVYRGGDPRAQHLREMSR
                     KLTAEKGEEKWFDISLQVEESVWELKHLKPNVDFYSASVYHALGIDRDLFTLVFSVSR
                     VSGWLAHIFEQYRDNRLIRPRAIYVGPENRSYLPVEERI"
     gene            complement(22924..23385)
                     /locus_tag="U0290_001087"
     CDS             complement(22924..23385)
                     /locus_tag="U0290_001087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF441 domain-containing protein"
                     /protein_id="HEM2301132.1"
                     /translation="MFTESMLFLLLFLLLGLIAKNNSLIIAVAVVILLKLFHVDGKAM
                     EMIQAKGINWGVTIITVAILIPIATGQIGFKDLIDSFKSAAGWIGLGAGIAVSILAKK
                     GVGYMAVDPQVTVSLVFGTILAVVLFRGIAAGPVIAAGIAYMAMQLVAFIK"
BASE COUNT         6664 a         4956 c         3794 g         7995 t
ORIGIN      
        1 agtccaattc cttttcgaaa aataataaaa aaaagaagat aaaaaagaca gctgattacc
       61 cctgaaaaaa tgaaatccat caaagtttgg ttatataaga tggcaatgat tgccagtaca
      121 cagaaaaata caattaatat tgagttaggg acatacaaat aaaaaatatc tgtgataaag
      181 aaaaaagcta aaaaaaaata aataatgtag taaagaagaa acgaatatga aaaagaaaat
      241 tgaatgtaca gaagaagtat atagattggt gttactaatt ccattaaaaa gtagattatc
      301 ggaataggtc tttcacagca tctagacttt cctctaaaaa aaagaaagga aaaaacggga
      361 atgatatgat agaaagcaag tgtcttttga caaaaattac actccgaaaa acggaataaa
      421 aatgattttt tcactggaaa acattctcct gcgacttgaa tgaacgacat aaatactgca
      481 ctataaatag ctaataaaaa gtaaatcatc tgtcacctcc tagttgttaa aaacagaata
      541 gcagagacga aatctttttg cacatagcta aaatcacttt tccaccttct attgcataac
      601 aaaaacacct attttcatta gtggaaaaca ggtgttttta tatattttat cttctgaaaa
      661 tcctttttta gctatttgtt cttttttatt tctcacagta tactcgattt attcaaaaga
      721 ttaacgtttt gaggccaaca aatatttccg cacttctgaa atgaaataaa gcgatcctgt
      781 aataaagatt ttcgtattag tctccgtttc gtaaagatta cctaatactt gctgccaatc
      841 tgggttcaaa gaaatacctt cattttttcc tatttgtatt acttcttccg ccatcatagc
      901 tctaggataa tcaaaagtag ttagtattat ttctgtattg ggaatggact ttaacattcc
      961 taacatttct tgatagtttt tatcagctaa tatactcacg attattttct taggcccaga
     1021 atacttttgg atggaatgag cgaatgtttt aataccttct ggattatgcg ctccatccag
     1081 cataataaat ggatttgaaa tgattttctc cattcttcct ggccaaaatg ctttttccaa
     1141 gcctttttta attgccgcca aaccaatttc aaaggtagaa aatgtattta agtactgtaa
     1201 tactttaata gctaccgccg cattattcaa ttgatgaaga ccaagcagcc caatggaaag
     1261 attgcttatt tcttctccat atatagtttt ataagttata tttccatttt cattatgcat
     1321 gaaaaaagtc tcatttaatt gagcaacatt ggatttattc ttttttgcta tcttagctat
     1381 aacttcttga gcttcttttt gtatagcacc tgaaacaact ggtattcctg gcttaattat
     1441 gccagctttt tcactagcaa tttgctcgat tgtatcccca aggaattcca tatgatccat
     1501 cccaatcgtg gtaattacag aaattagtgg cactagaata ttcgtagagt ccagtcttcc
     1561 gcctagtcct acttcgataa taccaatatc aatggaaaca tattccgcaa agcataaaaa
     1621 catcatagct gtaataattt caaattctga aggtggtcca taaatagttt tttctagctc
     1681 ttccgcaata ggtttaattc ggttagctaa tgaaacgatc atttcatcgc taatcggttc
     1741 accattaata ctaattcgtt cattaaaaac ttcaatgtat ggtgaagtga aggttcccgt
     1801 tctatatcca gcttcttcta gagcatttct aacaaaagta agtgttgagc cttttccatt
     1861 tgttccagca atatgtaccc acttattcgc tttttccgga tgatttagct tttccatcat
     1921 atactccata cgagctagtc caggctttat tcctagacga agcgttccgt gaatccaatc
     1981 taatgcttct tcatacgaat ttaatgtcat tatttaaacc accttaaaac tgaccctacc
     2041 agttgatttc atgataaggt cagttcgttt tttatacttc ttttaacgtt tcaattcttt
     2101 caagaacaga ggctttttta tctagataat ctttttcttt tagacgctct tctgcaacta
     2161 cactctcagg agctttgcta atgaatcgct cattgtttag tttcccttga actcttgcca
     2221 cttctttatt ccatttttct agttcttttt caagtcgagc aatctctaca tttaaatcaa
     2281 ttaacgcctc taaaggaatg aaaatctctg ctccagatac tacagcagtc atcgccgttt
     2341 tagatgcttc aacatcgaag gaaattgtca cttgttcagg gttacaaaaa cgttcaatat
     2401 aagaaatatt ttgttctaga atttctttat acgtagtatc tttcggttta atttcaagaa
     2461 caattggctt actaagaggc gtattcactt cagatcgaat attccggaca gcacgaatca
     2521 cttcaactaa agtagccatg gccgtagaag atttagtatc aatctgttgt tcattcactt
     2581 ttggccattc agcaattgta atagattccc cttcgtgagg taaattttgc caaatttctt
     2641 ctgttacaaa aggcatgaat ggatgaagta atcgcatagt cgcattcaaa gtatacgcaa
     2701 gtacagatct agttgtttgt tttgctactt catcttctcc gtaaagaggt attttcgcaa
     2761 tctctatata ccaatcacag aaatcatccc agataaagtt atataacgtt cgtcccactt
     2821 caccaaattc atatttttca cctaaggagg taaccgcttg aattgtttca ttaagtctag
     2881 tcaatatcca tttatcacta acttcagtaa cattagacaa atcaatttca ttatatttca
     2941 tcccatctaa attcattaac acaaaacggg atgcattcca aatcttatta atgaaattcc
     3001 aagtagactc tactttttca tagctgaatt tcaaatcttg acctggtgat gaacctgttg
     3061 caagtgtata acgaagagaa tctgctccat atttgtcaat aacttcaatt gggtccacac
     3121 cattaccaag cgacttagac attttacgtc cttcagagtc acgcactaaa ccatgaatca
     3181 atgtatcttt aaaaggtctc tcaccagtaa attcaacaga ttggaaaatc attctagata
     3241 cccaaaagaa aataatatca tatccagtta ctaaagtatt agttgggaag aaatgttgga
     3301 aatctggatt ctcagtatct ggccagccca ttgttgaaaa tggccataaa gccgaactaa
     3361 accaagtatc tagtacatct tcatcttgtt cccattcaga aaggttttca ggttcgcttt
     3421 caccaacata aatttcacct gtttctttat gataccaagc cgggattctg tgaccccacc
     3481 ataattgacg cgaaatacac caatcgtgaa tgttatccat ccaagtttca tatgtttttt
     3541 caaatctagc tggtacaaaa ttcactttgt tttccgtttt ttgaagttcc agtgcttctg
     3601 cagcaagagg ttccattttc acaaaccatt gtagtgaaag atagggttct actaccgctc
     3661 cagttcgctc tgaatgcccc actgaatgca agtgaggttc ttgtttgata aataaaccta
     3721 agtctttgaa atcttgaata atttcttttc tagctacaaa acggtccaaa ccatcatatt
     3781 taccagcatt tttattcatt gtcccatctt catgcatgac aataattctt ggcaactcat
     3841 gacgattccc tacttcaaaa tcattcggat catgtgcagg cgtaatttta actgcaccag
     3901 agccaaactc tctttccaca tattcatcag caacaatagg aatttctcta ttcaaaatcg
     3961 gtagcatgat ggttttacca attaagtgtt gatatctttc atcttttggg tgaaccgcaa
     4021 cagctgtatc acccggtatt gtttcaggac gtgttgtagc tacttctagg taaccagagc
     4081 catcagttaa tggatatttc aaatgataga aactgccttc aatatcttta tgaattactt
     4141 caatatcaga taaagccgtt ttcgcttctg ggtcccagtt tattatatat tggccgcgat
     4201 aaataagacc tttattatat aatgttacga atactttttt tacggcatcc gataaaccat
     4261 catctagtgt aaatcgttct cttgagtagt ctaaaccaag gcctaacttc tcccattgtt
     4321 cacgaataaa ctcagcgtat tcttctttcc attcccaagt cttatccaca aagttttctc
     4381 gtcctaagtc ataacgagaa acattagatt cttttaattt cgcttctact ttagcttgcg
     4441 ttgcaatacc agcatgatcc attcctggta aatataaagt gtcaaaccct tgcattcttt
     4501 tcattcgagt aataatatct tgtaaagttg tatcccacgc atggcctaaa tgtagtttac
     4561 ctgttacgtt tggtggtgga ataacaatac tgtaaggttt tttatccgta tttccttctg
     4621 ctttaaagaa ttctttttct agccaccatt tatatttacc tgcttctacg ttactcggct
     4681 catattttgt aggcatattt atttcattgt gttcgattgt cataatgatt cctccttttt
     4741 taggcaaaat aaaaaactct tctcatcctc ataaaaggac gaaaagagta ttattcgcgg
     4801 taccaccttt ttacccacag aaaaaaattg caggcacttc attgtgttaa cgatagagaa
     4861 atctaccggt tattccttac tataaattca ggaatactgc tccaaggcta ccttcagaca
     4921 tcatttttga aagcttgcac caaccgcttt ctctctttaa aaaaataaat gtcctactct
     4981 tcctcttcat tgcatttgat tctatatact agaaataatt ttaacaaaag tttcaagatt
     5041 cgtcaattag ccgcgaagta ttttgcatgt cgtatcaaat gcttccaagg tcttatcaat
     5101 ttctttctcg gtgtgcatcg tagaaatgaa gacaccctca aactgagacg gtggtaagaa
     5161 aatgccttga cctaacattt cacggtaata atttcggaaa aattctagat tacttgtttt
     5221 tgctgtatca aaattaatca ctttttgatc agtgaagaaa aagccgaaca tcgaaccagc
     5281 cttattaatc gagagcggga cttgtcttct agcagatatc tctgtaagtc cttcttccat
     5341 tcgcttaatt agggtgcgga aaacatcata gtgttgcggc gttagttggc gaactgtttc
     5401 aaagccagca ttcattgcta atggatttcc ggataaagtt cccgcttgat aaatagaacc
     5461 agcaggagca atctgttcca taatttcttt ctttccacca taagcaccaa ctggtaaacc
     5521 accaccaatc acttttccta aacaagtaag atcgggcgtt accacataat agccttgagc
     5581 agaatagtaa tctactctaa atccggtcat aacttcatca aaaatgagca aggagccaaa
     5641 ttttgtagta agctctcgaa gtccttctaa aaatccatca attggaggaa caacacccat
     5701 attgcccgcg actggttcaa ctatgactgc tgctatttct tctccatatt tttggaaggc
     5761 cagttcggct ccttcaatat cattgtatgg gactgttatt gtatctgccg caagaccttt
     5821 agtaactcct ggagaatccg gtaatccgag tgttgctacc cctgaaccag ctttaattaa
     5881 taaagaatct ccatgtccgt gataacttcc ttcaaatttc aagatttttt ctctttttgt
     5941 ataaccgcga gccaaacgaa tagcactcat cgttgcttcc gttcctgatg aaaccatacg
     6001 aacaatttca atagatggca cacgttcaat tactaatttt gctaattcag tttcaatctc
     6061 agtaggcgtc ccaaagctgg tacctttcag agctgctttt gtaatagcat taacaacagc
     6121 tggatcagcg tgccctaaaa ttagagggcc ccaagataac acataatcaa tatattcgtt
     6181 accatcaaca tctgtaatat aagcgccttt tccgtggtcc ataaaaactg gcgaggcatc
     6241 tacagagttg aatgctcgaa cagggctatt tacaccacca ggtaagactt ttttggcttc
     6301 tttaaaggcc ttttcggatt tcgaatagtt ttgcaaattt cttacctcct atttatttaa
     6361 atatttggat gcatcttttg caaaataagt aatgataagt gttgcacccg ctcgtttcat
     6421 acttgttagc atttctaaaa caattttttc ttcatctatc caaccatttt gcgcagctgc
     6481 ttttaccatt gcatattcac cactaacatt gtaggcaact actggtaaat tggtattgtt
     6541 cttaacatcg cgcatgatat ctaagtatga taatgatggt ttaacaataa ggaaatctgc
     6601 accttcttgt tcatccgaca ttgcttcgcg aagagcttct tcacgattgg caggatccat
     6661 ttgataagat tttctatcac caaattgagg ggcactacca gcagcatcac ggaacggtcc
     6721 ataaaaagca gacgcatatt taactgcata tgacataatt gggatatcat aaaatcccgc
     6781 ttcatctaac ccttcgcgaa tgacttgaac aaaaccatcc atcatattag atggagcaat
     6841 gatatccgct cctgcagcgg cttgactgac agctgtttgt ttcaataatt caagcgattc
     6901 gtcattgaga atttccccgt tttcaataac accacaatgt ccatgatcag taaattcaca
     6961 taaacatgtg tcagccacca caagaatttc aggaaaactt ttttttataa gccttgtagc
     7021 ttcttgaata attccgtggt cgtgataagc ttgcgtgcca actgcgtctt tctcggcagg
     7081 aataccaaat aaaataaccg ctttaatacc aaggctctca actacgcgca tttcttcttc
     7141 tagttcatgt aaaggatatt gaaaaacccc aggcatagaa gctacttctg tttttggttc
     7201 tttgccatct ttaacaaaaa tcggatagat taaatcatct gtatgtaaaa ctgtttctct
     7261 tactaaatca cgcattgttt tggtttttct tagacgacga tgtctatcaa attgattttt
     7321 cattttaatt cctcctgtat tatcaaatca gctaggtgct tcatggtgaa ggtttttggt
     7381 tgatatttta cttcccatcc atctgctata atggcttctg ttgtaatact accaatggat
     7441 gcaatatgcc acttctcttt ttgagcaggg aatgacttcg cagtggaata gaagtttttc
     7501 catgcagatg ggctggcaaa aacaattatt tgtgtttcat ttagtttcag ttgttcgatt
     7561 aaccgtattt tagaattttc tggaaagatt gtttcataga gctcaaacga aacaacgatg
     7621 taaccttttt caatcaatct atcttttatt attgttctgc ttaaattact ttgtggtatt
     7681 aagatacttg ttttctctgg gttttcgttt agccattctt ctaaaaatac ttctgactga
     7741 tagatagatg ggacaaaatt tggttcgtga ccaaattctg ccagtttttc ttttgttttt
     7801 tcaccgatga cagctatttt ataattgaat ctttcatgtt ggttcgtaaa gaaatattct
     7861 acagcatttg cacttgttaa aaaaagccag tctgtttgtt gttgttctcg actcaaatcc
     7921 atttttatag gtcgtgtttt aatcagcggg attgacgtca cttcaaaacc attttgcgaa
     7981 aaataggttt gccatggttt gtttttattc gcttctcttg ttaaaacaac ttttttactc
     8041 atatatttct cagttctttg ataatagtat ctgcaccttc acttagcaaa tcttctgcta
     8101 ctttatttcc aatttcactt ggatttgcac cagcttgttc ggatgcaaga atgatggaac
     8161 catccgcatt accaactaaa cctttaaaat gaacgacttc attagctctt gtagcaaagc
     8221 cggcaatcgg aatttcacag ccaccattta attttttcaa gaaaacacgt tctgcttcta
     8281 cacaaattcc agtttcttcg tgatgaatag aagttaacat atcgcggatt tgttgatcac
     8341 tttcgcgaca ctcgatagca agtgcacctt gtccaacagc tggcaaacat aattctggtg
     8401 ggatgtcttc tagttttaac gtagtatttt ctaaccaacc catacgagct aacccagctt
     8461 ttgctaagat aattgcatca aaattttctg catgtaattt ttgaagacgt gtatcgatat
     8521 tgcctcgaat cggtttaatc acaaaatcag gtcgatgttt tagaagttgt gccgctctac
     8581 ggaggctact tgtaccaatg accgagcctt gtggtaactc atctagagaa ttcactcgat
     8641 tgaaaacgaa gcaatctaat ggcgattcac gttttggaat cgcgccaata attaaccctt
     8701 ctttcaaact tgatggaaca tctttcatgc tatgtaccgc aaaatcaatc acttcatcac
     8761 ttaaagcctg ctccacttcg gatacaaata gaccttttcc gcctactttg ctaagtgtta
     8821 catctaaaat acggtcccct tttgtaacaa tttcttttat ctcaaaatcg aactcaggat
     8881 aattttcttt gagcttgtta atcacccaat tagactgagt taaagctaac ttgcttcgtc
     8941 tagaaccaac aattattttc cgtttcatcc gttaactcct cgtttcggct tgttcttttt
     9001 ctattacagt aacatctgtt tcactcaacc caaaaatacg tttaaaatgt tcaatacttg
     9061 tagttgcatc ttcttctaca gacatttctt ttaattctga gataggttgt ttcagcattt
     9121 ggtttataat gcttttcata tgttttccaa tttgaatgta ttcgcgttct gttagtccag
     9181 gaagtttatt ttctaaacta gtcatagtaa cttcttgcat atctaacgct ttttcacgca
     9241 aagcacgaat aacagggacg acgcctagtt gcttttccca ctcgaaaaag ttacgaactt
     9301 ctgcctcaat agttttttca agttccagaa cgattcgctg ccgctctaat gagttcgcgc
     9361 taacgacccc tgccaaatcg tcaatgtcat ataaatggaa attgggaatg tatgaacaat
     9421 catgttcaac atttcgaggt aaaccgatat caattacaag catcgaactc gctttttgtt
     9481 ccatcaaatc ttgcatagca gcttgtttaa taataggttc tgccgcactt gtcgaaacga
     9541 gaacgatgtc tgctagcatc aaatgttcat tcatattttc atatgcgccc acttttgctt
     9601 gaaattgatt tgctaataat tctgcattag atttagtacg gttgatgatg gttatatctg
     9661 caatgccgct cccagcgaga ttttgcaaag cgagttcact catttcccct gcaccaacta
     9721 gcacaatttt cttattgtct aatgaaccat ataatttttt tgcaacctct acagcggcat
     9781 aactgacaga cacagcattt tcattaattt ttgtatggtg gtgtactttt tttgcgaaag
     9841 taactacttc ccgaaaaagt ttatttaaaa gtgtacctgt tgtagccgtt tgtttggcga
     9901 tttcgaatgc atgttttact tgtccgagga tttgcgtttc tcccagtact aacgaatcaa
     9961 gtcccgcggt tactttatat aaatgattga cagcatctga ttcttcatgg aaaaacaaat
    10021 aaggttcgat tttttccata tccatttgaa accagttagc cataaagcgt tttaagtaat
    10081 atctacctgt atgtatttga tcaacaaccg caacaatttc tgttcgattg cacgttgaaa
    10141 taataacatt ttcgaggata cttttttcct gctgtaatgt tactaaggcc atttcttctt
    10201 cgctttcttt aaaaactaat ttttcgcgga tgtcgattgg tgctgtgtga tgattcagcc
    10261 ccatggtgag aataaacatt cgataatcct cctaaaatta aattgaactc taatacattc
    10321 taccactttt cgatgtgttc accaaatagt ccgtttatgt atttagacgg aaaaaagagc
    10381 tggatttttc attccaactc cttctattat tccattcctt ctttgataaa ctgccatgct
    10441 tcgtcttttc ccatttttgt ttcagaggaa aataagacaa atttgtcatc aggatcaaaa
    10501 tcaagtgttt ctcggacaat tttagcattt ttttgccatt tactgcgtgg gattttgtct
    10561 gctttcgttg ctacgacgat gacagggatg tcgtaatact tcagaaattc atacatcatt
    10621 cggtcatctt cagttggctt atgtcgtaaa tcaacaattt ggataacacc acgaagttgc
    10681 tcgcgagaag taatataggt ttcaatcatg acgccccatt tttctcgttc tgttttcgaa
    10741 actttagcga aaccataacc gggtacatcg acaaagaaaa gtgcttcttc aattttataa
    10801 aaatttagtg tttgtgtttt tcctggtttt tgtgaaattc ttgccatact tttgcggcga
    10861 atcatcgtat tgataaaaga tgattttcca acgtttgatc gacctgcaag tgcatattct
    10921 ggaaggtctg tctcgggata ttgctctggt cgaacagcgc ttattattag ttctacatta
    10981 tttacatcca taattttcca tcctgttcta ttcattatct tttactagta taacggaaaa
    11041 agaggaaaaa agcaccatga aaaaatactg ccccctttaa gagacagtat tttcgtgatt
    11101 aatatttgct tacttcagca acaacctgtg cgataaatgc atctaaatcc attgtttcag
    11161 agtctttaga gccgtaacga cgaacattaa cagaaccagc ctctacttct tggtcgccta
    11221 atactaaggc ataaggaatt ttctttgttt gtgcttcacg gattttatag cctaattttt
    11281 cattacgatc atccacttca gcacgaagtc cagcgcgttg taatttatct tgtacacctt
    11341 ttgcataatc taaatgcgca tctgcgttaa ctggaataag ttccatttgt actggagcta
    11401 accaagttgg gaaagcacct ttgtattctt cgattagata tgcgacaaaa cgttccattg
    11461 tcgatacaac tccacggtga atgacaactg gacgatgttt ttcgccatct tcgccaatgt
    11521 aagttaagtc aaagcgttct ggaagtaaga agtcaagttg tacagtggaa agtgtttctt
    11581 cttttcctat tgcagttttc acttgaacat ctagttttgg accgtaaaat gcagcttcac
    11641 cttctgcttc aaagtaatcc atttccattt cgtccatggc ggatttaagc atggcttgcg
    11701 ctttttccca catagcatca tcgtcaaaat atttttcagt atttttcgga tcacggtagc
    11761 ttaggcggaa ggagtaatct ttaatatcaa agtctttata tacttctaaa attagctcta
    11821 caacccgttt gaactcatct ttgatttggt cagggcgaac aaatacgtgt gcatcattta
    11881 aagtcattcc acgaacacgt tgaagtcctg aaagcgcccc actcatttca taacggtgca
    11941 tcataccaag ctcggcaata cggattggta gttcacggta actatggata tcatttttat
    12001 aaatcatcat gtgatgcggg cagttcattg gacgtaaaac tagttcttcg ttgtccattt
    12061 tcattgttgg gaacatgtct tcatggtaat gatcccagtg gccgcttgtt ttataaagct
    12121 caacattagc cataatcgga gtgtaaacgt gattgtaacc aaggcgttct tctttatcca
    12181 caatgtatcg ttcgataacg cgtcggatag tcgcaccttt tggcaaccaa agtggtaaac
    12241 cttgaccaac ttcaatacta tttgcaaata aatctagttc tttacctagt ttacgatgat
    12301 cacgttcttt cgcttctttt tgcatttgga taaattcttt taagccattt ttatcgaaga
    12361 aagctgtgcc gtaaatgcgt tgtagcattt tgttgttact atcgccacgc cagtatgcac
    12421 cagccacgct aagtagtttg aacacttgaa ttttaccagt agaaggaaca tggactccgc
    12481 gacaaaggtc gaaaaattca ccttgtgtat aaattgtcac tgtttcatct tctgggattg
    12541 cttcgataag ttctaattta tattgatctc caattgcttt gaaacgttta attgcttctt
    12601 cgcgagaaac aacttcgcgc tcaattggaa cattttcacg cacaattttt tgcatttctt
    12661 tttcaatttc aacaagagat tcatcgctaa taactgcctc tgtatcaata tcataataga
    12721 aaccagattc aatcgctggg ccaacaccaa atttcacatc tggataaagg cgtttcaatg
    12781 cttgagccat taaatgagct gtactgtgac gcaaaatacc aagcgcatct tcatggtctg
    12841 gtgttacgat ttcgattgct ccgtcttcgt ggattggtgt tactaaatca agtaactccc
    12901 cgtttaattt acctgcgagt gctttctttt ttagccctgg gctgatagaa gcagcaatat
    12961 ctgctgttga aacgcctggc tcaaattctt ttactgcacc gtctggaaat gtgattttca
    13021 tactaatctc tccttttctt tttttagtgt ggttaggagg gcaaaataaa aaacccatcc
    13081 ctcctgttgt caagggacga gtttatgctc gtggttccac ccaagattca gaaatagcta
    13141 aaaataacta cttcactctt gtcgcttata acggagcgat ccgtctatta ttactagtta
    13201 aacacgttcc taatagaagt tccaaggtgg tccaaattta agttccaata gaaggttccc
    13261 agctagccct tcctctctaa aattttccgt taaatcggtt gtccttttca tcactttgtt
    13321 ttatattact tcaaattata agcccgatta aacatatttg caagtacttt ttagaaacgg
    13381 cgatttttcc cttctaagtt aacctctttc gacaaatagc gcacccgttc catgattcgg
    13441 cgagctttta gtttttcttc cgtaccattt tgggcaaaca ttaaatgatt ttctagttga
    13501 tccatgttgt aatttgatga gaagaaagtt ggtaattcct cttgcatccg gaattgcaaa
    13561 atcgcaccca acacttcatc tcgcgtccaa gcggtcatcg attctgcgcc aatatcatcg
    13621 agcatcaata cttctgtttc tttcgcaaat tgaatttttt caccgactgt attgtcagaa
    13681 atagactgtt tcacttcgcg catgaactcg ggtaaataaa caagtgtagt tgaaatacct
    13741 tttaaagcaa gttctttcgc aagggcccct aacaaatagg atttcccagt cccaaagcta
    13801 ccatgaataa ataagccctt cacacgttcc ccacttttcg gaggataatt atttaaaaat
    13861 tgatatgctt ccacaagcgc taattgacgc gattcttcat cggtataaaa gtccgctaag
    13921 ttcgcgtcca ctacttgctt aggcatataa agagaacgaa ttcttcgctc aactgcacgg
    13981 cgtttatctt cttctatttt ctctttcgtc ggatagtagg tgacagtgat gaattcccca
    14041 ttaagaacaa gttttggtgc ataaccaggc attatagttt cttcctgttc cgtgaatttt
    14101 ttgtgttgcg tcataaattc atataaatta gacaaatttt gattaactaa ttgctcggta
    14161 acctcttctt tgtgctcttt gaaaaagtct tgaattggtt gataatggag aacttgttgt
    14221 tttaaacctt ggtattcttt ttcaaagtcg cggccttcaa aaagctgtcc taatgttctt
    14281 tcgatgttat ccatcttctt cacctacctt ttatttagtc gttctttaat ttcacgaact
    14341 tgttcttcga gtgtttgttt ttctttatct gtcattttat tttcggctgg agcaacttgc
    14401 tccttatcaa accaatccgg caaaatttct tttcgcgttg ttttttgata atttcggttg
    14461 taattattcg tttttggtgt ggctggttct tcttgaagtc gtttgtattt ctcgtgctct
    14521 tgccacgcta gatccattgc ttcttttgct gtttttacat tttttcgttt ccagtgagca
    14581 gcaatcgtca tcatgtaatt tttagaaagc ttccggtcaa gccggagtaa cacgtactca
    14641 atcagcacat tcatcacagg aactggtaaa ttttgctggt tcatgacttc ttctacaacg
    14701 cgcaaatcgg tttcagcggg aactgccccg tctgaaatgt ctaccaaaag ttgaaaaggc
    14761 gtgatgctct ctaaatatac ttgcagcgct tcttcatcat ttaacgattc ttctggttct
    14821 ttatcgacag gcgtttcctg cttcatttgc agttttggcg gcgcaccgtg ttcgatggtg
    14881 tagccttcac gaacgatttt acgcaaataa acgatgtcga tttcaccatt tgcatcaagc
    14941 gcacgataca aataactcgg catatctttt tcagaaactt gataaatccc gtgaagtttt
    15001 aatatcgttt ggcgtacttc ttttgttatc ttttcgcgag caatcattcc cggtgaaagc
    15061 aagctcaaaa acaaattaaa gtcaaaactc gcgtcatcaa attcaatttc ttttggcgtc
    15121 actttgtcta gtaacttttg actagtttca gtcgtaactg cactactacc acctttaaac
    15181 ggttcgaaaa catcttgaaa cgaacgagtg atttcactgt atgtagctgt gtcaaatgcc
    15241 tcgtctgcga aaaaacgacg caaacgttga aactgagcat tgccaatttt gctatataaa
    15301 taaatattta atagaccatc tgaaaaaaac ttttctggtg ataacggtgg caagatttcg
    15361 taaatataaa agcgttgatc gttttcggtc ttcacataac tctttaaaag acctaagcct
    15421 tctaatttta gccttgcctc gaataacgct ttcaaactaa tatcaagcat atttaaaagt
    15481 tggacgtgcg aatgcgcttc tgaccaaagt ctgttttctt cgacttctgt gaacagtgtt
    15541 tgatataaag caagacactc cgcccccatt agcggttgat ataacatcgt aataattttt
    15601 ctgtcggcgc cggtcaagat tccacttgct tttacttgat agctgtctac cgcttgaagc
    15661 tccatccaaa attccgtcaa tttactcacc tatctttatt tttttccatt aaatctttta
    15721 actcttcgac aaacacacta atatctttaa attggcgata caccgaagcg aagcgcacgt
    15781 aggctacttc atcgagattc gctaatttat tcatcacttt ttcaccaatt aagtcagacg
    15841 cgatttcact gtctccaata tttcgcagtt cacgttctac ctcattgaca atttcttcaa
    15901 tttgttcagc gctaactggt cgtttttcac atgctcttat taagccgcgt cgcacttttt
    15961 cacgagcgaa ttcttctctt gctccatctt ttttcacaac tattaaagga ctctcttcta
    16021 ccttttcaaa agtagtaaaa cgaaatccgc atttttcaca ttcacgccgt cttcggatgg
    16081 aattgccatc atctgccggt cttgagtcta caacacgtgt accattatat tgacaagtag
    16141 gacatctcac aaaaactcac tcctatctct agctttctct atctgtttat ttgtatgcct
    16201 cattatacca tgtgaaagta agggtggcta tttgttcttt acaaaacgct tgataaatgt
    16261 aagaacttgt ttttgtgtct tttcaagtga ttcattatta tcgatgacaa aatcagcttt
    16321 tctcgccttt tcatcgattc ccatttggct ttcaattctt cttaatgcat cttcttttgt
    16381 tagattattt cgctccatca ggcgttttaa ctctgtttca ggggtggtcc aaacaacaac
    16441 tattttatcc accaacgatt ctaaatgact ttcaaacaaa agcggaatat cgaaaaagac
    16501 aagctcctct cctgcttcaa aaaaacgttc gcgcgcttcc aacatatagt ctttcacacg
    16561 tggatgcgta atttcattta acttttcacg cttttcctta tctttaaaaa taatttctcc
    16621 taatttagct cgatttaatg tgccatctgc aagtaaaatt tcttccccaa aataagcaac
    16681 gatttctttt agtccttctg tgccacgctc cactactttt ctagcagcaa tatctgcatc
    16741 tactaatgga atacccgctt gctgaatcat gttgctcact gttgatttcc ctgttgctac
    16801 acttcctgtt aatccaatcg ttttccccat gatttcagct cgctttctat ttttggcaat
    16861 tcgggcaaaa atgtgtcccg cgtccgttta atttaatttt ttcaattggc tttccacaaa
    16921 caacacacgg ttcgtctgtt ttgccgtata cttttaattt atcttgatat tgtccaagct
    16981 tcccttgcga atttacatat gttctgacag tggagccacc aagtgctaca gcttcagtca
    17041 taatactttt cgtcgcttca aaaatacgtt tgatttcttt gtctgaaagt gagttagctg
    17101 ctctttccgg gcgcactttt gcttcaaaac aaatttcatc cgcataaata tttcctactc
    17161 cggctactaa cttttgatca agtaaagccg ttttgatggc gcggcttgtt ttttttacac
    17221 cagtcgcaaa atccgttgat gtaaaggctt gcgtcagcgg ttctgggcca agctttttaa
    17281 tcgaccgcgt ttcaccctca ccgtatttat ttgttacttc catcgtgcca aattttcgca
    17341 catctaaaaa acgcaattcc gtgtgatctt caaaatgaaa aataatatgc gtatgcttgc
    17401 taacctcttc cttttcatcc attaaccgaa atttaccttc cattcgtaaa tgcgataaaa
    17461 tcgtacagtt ggttaagtca aaaagtaaga atttaccacg acggcgtaca ccctctattt
    17521 cttgcccgac aagcatatgc acaaactcat cgggtggtgt tgatacaatc atttttggaa
    17581 cacgaacaat tacttgatct atttttttac ctgggactaa ttcttgtaaa gttgcgcgga
    17641 cattttctac ttccggcatt tctggcatat ataaactccc cgtttctcta tttatttcgc
    17701 gtcgtaccaa gtgtcaccaa atgcgctatc tacttttagc ggtacagaaa gctctactgc
    17761 attttccata acatctggga caatttcttc taatttagcg atttcagctt caggcgcctc
    17821 gaagattaat tcatcgtgta cttgtagtaa taattttgct tctaattttt cagatactaa
    17881 acgctcgctc atcagaatca tcgctttttt gataatatca gcggcactac cttgaatagg
    17941 cgtgttcatc gccgttcttt ctgcaaatcc gcgaacatta aaattacgac tgacaatctc
    18001 tggaatatac cgacgacgat gtaaaatggt ctctacatag cctttttctt tcgcaaaacg
    18061 aacgatgtct tgcatatatt ctttcacggc tggatagctc acaaaataac gatcaataaa
    18121 gtcttttgct tctttacgcg taataccaag attttgcgaa agcccataat cactaattcc
    18181 atatacaata ccaaagttta ccgctttagc ctgacgacgc attaatgaat ccacttcgtc
    18241 ttgctcaaca tgaaacacgt ccatcgccgt tttcgtatga atatcataat cgtgcttaaa
    18301 tgcataaatt aaattttcat cttccgaaat atgtgctaag actctcagct ctacttgaga
    18361 ataatcggct gaaaacattt tccaacctgg tttactcggt acgaaaactt gtctaatttt
    18421 ccgtccttct tctaaacgaa tagggatatt ttgcaagttc ggatcaactg aacttaagcg
    18481 tcctgtttgc gttaatgttt ggttgaaacg tgtgtgtact ttatgtgttt ctttatctgt
    18541 cactttaagc agcccttcga tataagtgga ctgaatttta ccaagttgac gatataacaa
    18601 aatttcatca ataatcgcgt gtttaccaga taaactttcc agtacatcgg cagccgttga
    18661 ataacctgtt tttgttttct tgacagctgg gagaccaagc ttttcaaata aaatcacacc
    18721 tagttgtttc ggtgaattaa tattgaattc ttcgccggct agagaatgga tcgactcttc
    18781 caatgttttc agtctacccg ctagctccac tttcatattc tctagacgtt ctgtatctac
    18841 actaacccct tgcatttcca tttctgctaa tacaaaagtt agaggtagct caaggtcttc
    18901 catcaaagct agttgttcat tttcttctaa atcatcaact agtcttttct ctaagtcagc
    18961 aatagccact gcttttctag ctaagtgtgc cgcaacaatg ctttcttcag gagtgctacg
    19021 tttagcacct tttccgtaga ctgcttcatc tgtttctact tctgtgtaat catgtcgtat
    19081 tgcaacactt gtaaagtcat caatcgaatc agatggattt agcaagtaag atgctaacat
    19141 gatatcaaag gtgataccag aaatggctaa accaatgcgg ttcattgcaa ccattgtttt
    19201 cttcgcatcg tacactactt ttgtttgatc actttctacc catttgcgga atacctcact
    19261 actttcggct gtttcttttg taaagaaata cgtcccttgg ctagaatgta ctgttaatcc
    19321 aatgaaatta gctgtatggt aattatcgtt ttctagctcc acataaagcg cggttttccc
    19381 accaaaatgt ttttctttta attctgttac gatttcaaaa gacaactctt ttagttcttt
    19441 cgtttcttct ggtgtatctc cctcgatatt tttcaaaagt gttgtaaaat tcatttcttt
    19501 taataaaggg ataacttttt ctgtttgata gccgtcgtat ttcgtgcttt cgaccgtgca
    19561 ttcaatcggt gaatccacat tgattgtagc taactcttta cttaaaatag ctaattcttt
    19621 attttccagt actttttctt ttagtttttt accggaaatt tcctcggcat gctctaacac
    19681 actttccacc gttccaccaa attcatgtaa gagttttaag gcagtttttt caccaacgcc
    19741 tggaatacca ggaatattat cggaggaatc acccattaaa cccttcatat caatgatttg
    19801 ttgaggagtc agattgtatt tttcttttag tgtttctggt gtgttggttt ccatatcggc
    19861 tatgcctttt ttagtaatat aaaccgttgt tttttcagaa gctaattgcg ttaagtcccg
    19921 gtctccggta atgattgcta cttccattcc gtctgcttcc gcttttttcg tcaatgttcc
    19981 gataatatca tctgcctcat aattggcaag ttcatattgc gggatatcat acgccgttaa
    20041 aagttctcgg atgaatggaa actgttcaga taactcactt ggggtttttt gacgtccgcc
    20101 tttataacct ttaaatgttg tatgtctgaa agttgttttc ccagcatcaa atgcaacgag
    20161 cacatggcta ggtttttctt tttcgagtac attcatcaac atcattgcga aaccatacac
    20221 cgcatttgtg taaacacctt tatcattatt taaaagcggt aaagcataaa aggcgcgatt
    20281 cgcaatacta tttccatcaa ttaatactaa tttattcaca gggatatcct cctcgatatt
    20341 gtcattcact tgtgtctatt ttaccatagg aacataaaaa caaaccactt atccgaatgg
    20401 gattaaatgg tttgttttaa aaacgtatat ttatggttaa aaataaaaat acagactagt
    20461 tttagaagtt aaaatagatt gttttagaaa ttttttatta attcatctgc aaattccgaa
    20521 catttaactt ctgtcgcacc atccattaat cgagcaaaat cataagttac ggttttcgca
    20581 gcgattgttt tttccattga ctgattaatt aatgcagccg cttcacccca accaatatgt
    20641 tcaagaagaa gtgtcccaga taaaataact gatgaaggat tcactttatc aagacctgca
    20701 tatttcggtg cagtaccatg cgtcgcttcg aaaattgcat ggccagttaa gtagttaatg
    20761 tttgctcctg gagcaatacc gattccgcct acttgagcag caagtgcatc agaaatgtaa
    20821 tctccattca agttcattgt agcaactaca tcaaattcag ccgggcgagt taagatttgt
    20881 tgcaagaaaa tatccgcaat cgaatctttg actaaaattt tcccagcagc aagcgcttct
    20941 ttttgtttcg catcagcaac ttctgttcct tctgcttctt taatgcgatc atactcattc
    21001 caagtaaata ctttatcgcc atattcgcgt tcacataagt catagcccca atttttgaaa
    21061 gctccttctg tgaatttcat gatattccct ttgtgtacaa gcgttaatga tttacgacct
    21121 tctttaattg catattcaat cgccgaacgc actaaacgct ctgttccctc tttggaaatt
    21181 ggcttaatac caataccaga agtttccggg aaacgaattt tgtcaacgcc aaactcagat
    21241 tttaagaagt cgattagttt ttttgattct tcgctgcctt ctttaaattc aatccctgca
    21301 tatatatctt ctgtattctc acggaaaatg accatatctg tgtcttccgg acgtttcacc
    21361 ggtgaaggaa cgcctttgaa ataacgaact ggacgtaaac aaacatataa atctaactct
    21421 tggcgcaggg caacgtttaa cgaacgaatg cctccaccga ttggagtagt aagcggtcct
    21481 ttaatagcaa tcaaatattc atcaattgta tctaaagtcg cttgtggtaa ccattctcct
    21541 gtttgtttaa atgctttttc accagctaat acttctttcc aagcaatttc tttttcgcca
    21601 ttgtaagctt tttttactgc ggcatctaaa acgcgttttg cagctgccca gatgtctgaa
    21661 ccagttccgt ccccttcaat aaaaggaatg actgggttgt ttggtgtttt gagcacaccg
    21721 ttttctactt gaattttttg actcataaag tttgttcctc ctcgattaaa ttcgttcttc
    21781 tacaggtaaa taacttctat tttcaggtcc aacgtaaatt gcacgcggac gaataagacg
    21841 attatcacgg tattgctcga aaatgtgtgc taaccaacca gatacacgac tcacagaaaa
    21901 cacaagcgta aacaagtcgc ggtcaatacc aagcgcatga taaacggagg ctgaatagaa
    21961 atcgacattc ggttttaagt gtttcaattc ccaaacagat tcttctactt gcagcgaaat
    22021 atcaaaccat ttctcttcgc ctttttcagc agttaacttt ctggacattt cacgcaaatg
    22081 ttgcgcacga ggatctccgc cgcgataaac acggtgacca aatcccataa tcttttgctt
    22141 cgtatcaatt ttttcttgaa tgtaattacg cacatcacca gcttggtcaa tttcttctaa
    22201 catatcaaat acgcgttcat tggcaccacc atgaagcggg cctttcagcg caccgattgc
    22261 agctgttacg ccggaataaa catccgaaag cgttgccaca caaactcgcg ctgtaaaagt
    22321 agacgcatta aattcgtgat cagcgtgcag tacgagcgct ttattcattg cttctactga
    22381 taatgcatct gcttcttctc ctgtaatcat atataggaaa tttgctgcca tatttaaatc
    22441 ttctctcggt ggaattggat cgagtccgcg acgaattctg gaaaaagcgg caacaatggt
    22501 tggcattttc gcttgaagtc gcaaaccttt acggtaaact gcttccccgt cgtctaattc
    22561 agcttctgta tcaaatacac cgagcataga aactgtagtt cttaaaacac tcatcggatg
    22621 taatttttgg tgattttgca ttcttaagct cgtaatgatt gtttcagaca ctgccatatt
    22681 ttcttggatt tctcgtttaa attttttaaa ttcatcttta ttcggcaaac gtaaatgcca
    22741 taataagtaa atcacttctt caaaagaagc gttattttcc attaaatcgt caataccata
    22801 gccaacataa gttaacatat catcaatgat agagctaatg gaagtttcag caacatatac
    22861 attttctaag cctttagata acgtcatttc atttcctcct tttatccttt tttacgtatg
    22921 tacttatttt atgaatgcaa ctaactgcat tgccatgtac gcaataccag ctgcaattac
    22981 tggtccagca gcaatccctc taaaaagcac cactgctaaa atggtcccga atactagtga
    23041 gacagtcact tgtggatcaa cggccatata gcctacacct tttttcgcta agatagaaac
    23101 ggcaattcct gcaccaaggc caatccagcc agctgccgat ttgaaagaat caattaaatc
    23161 tttaaaaccg atttgaccag ttgcgattgg aattaagata gcaaccgtaa taatcgttac
    23221 accccaattt atcccttttg cttgaatcat ttccattgct ttgccatcga cgtgaaataa
    23281 cttcaacaaa ataacgacag ctacagcaat gataagcgaa ttattttttg ctataagtcc
    23341 gagaagtaaa aaaagaagta aaaacaacat actttccgta aacatattaa gtcacctttc
    23401 aatatcacg
//
LOCUS       DASDYO010000032        23125 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.032, whole genome shotgun sequence.
ACCESSION   DASDYO010000032 DASDYO010000000
VERSION     DASDYO010000032.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 23125)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 23125)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..23125
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.032"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(35..373)
                     /locus_tag="U0290_001088"
     CDS             complement(35..373)
                     /locus_tag="U0290_001088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEM2301133.1"
                     /translation="MNKDNRKELIRAYKEKSPDAGVYRFISTKSGKSLIDNTMDLKGI
                     ANKLAFGVKIGAGNMLPPEMAKEAKEYGIDTIQFEILEKVDIKPEMTKEDIKEENDVL
                     LSLWLEREDI"
     gene            complement(387..866)
                     /locus_tag="U0290_001089"
     CDS             complement(387..866)
                     /locus_tag="U0290_001089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301134.1"
                     /translation="MKIPTTLKHKPVIVVENYEEVDGKNAYHSDAKGLSLGLAQWNDR
                     GKVDISAKVWRHTGDKWSRQSEELPLHRVLDLAILIARTKVHFKDAYRLPHFYDKENP
                     MLDRIGLQGDALTIAVCEDNEYIDEDMQLFEQVLKNDDELLSERLKTLSKLLQEAGY"
     gene            complement(949..1689)
                     /locus_tag="U0290_001090"
     CDS             complement(949..1689)
                     /locus_tag="U0290_001090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301135.1"
                     /translation="MEVSHVTLEPNKDSRPAVLTIGKFDGVHIGHQTILNTALSIKKE
                     NEILTAISFSPHPLWALKQIEIYREMLTPRMEKERWLAHYGVDHLIETAFTPRYAETT
                     PEEFVRDHLTNLNLSHIVVGSEFNFGKGRDSDVDLLRDLCKPYDIGVTSVPVIETNQT
                     KISSTNIRAFIRRGHFQEAEELLGHPWYITGIVENGEMTGLDDYVLPATGTYQTDSGI
                     VNVTNNRTIEVGLSDGLQQLHMKNELSE"
     gene            complement(1802..3607)
                     /gene="glmS"
                     /locus_tag="U0290_001091"
     CDS             complement(1802..3607)
                     /gene="glmS"
                     /locus_tag="U0290_001091"
                     /EC_number="2.6.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine--fructose-6-phosphate transaminase
                     (isomerizing)"
                     /protein_id="HEM2301136.1"
                     /translation="MCGIVGYIGTNNAKGILLEGLEKLEYRGYDSAGIALQNKDLVTV
                     VKEKGRIADLASLVPSDAFGTTGIGHTRWATHGKPNHENAHPHQSKSGRFTMVHNGVI
                     ENYTLLKEEYLKNHSFVSDTDTEVIVQLIELFAAELSTKEAFKKALSLLHGSYAICLI
                     DQTDTETLYAAKNKSPLLIGKGENFNVIASDAMAVLKETDEFVEIMDKEIVIVTKDGF
                     TLETLEGEEISRASYTAELDASDIEKGTYPHYMLKEIDEQPAVTRKIIQAYQNEAGEI
                     NVDQTILDEILSSDRIHIVACGTSYHAGLVGKNLIEKMVKIPVEVHVSSEFGYNLPLM
                     SKKPLFIFITQSGETADSRQCLVKVKELGYRTLTLTNVPGSTLDREADHSMYLYAGPE
                     IAVASTKAYTAQISVLAVLAVSLGREIGDAEALSINLAAELGIVATAMEAMVSSKEVI
                     EHIAGEYLATSRNAFFLGRNIDYFVAMEAALKLKEISYIQAEGFASGELKHGTIALIE
                     DGTPVLALITQESINWNIRGNVNEVLARGAKTCVFAMENVAQPGDRFVIPQVHPLLTP
                     LASVIPCQLLAYYAALHRDCDVDKPRNLAKSVTVE"
     gene            4054..4266
                     /locus_tag="U0290_001092"
     CDS             4054..4266
                     /locus_tag="U0290_001092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2301137.1"
                     /translation="MVFAKKLVASIAVFISLGFIYFRESTAVAFESTNTASFLPSTGD
                     AFSVWPIVIGVVLVALAVVLFIKKKI"
     gene            complement(4309..5037)
                     /locus_tag="U0290_001093"
     CDS             complement(4309..5037)
                     /locus_tag="U0290_001093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEM2301138.1"
                     /translation="MRIWIKSLLVITACIFSLTLLNTKYTFYSPTVKLESAKVVYKLD
                     NEPFNVRLDVPLVNQMDAPTLFNGCEVTSLAMLLQFNGKRVTKNELANNLPTTPIEQN
                     GLHGNPDKAFVGSISGDSPGLGVNHAPIANLAAKYVNEAHVHDISGNSIQDIITVLST
                     GAPVWIITTTDYHAPKNWQTVQTKEGKKKITYSMHSVVITGFDKDNFYINDPYGHKNR
                     AVKRSVLEEGWSAMGKQAIYLSHP"
     gene            complement(5050..6855)
                     /locus_tag="U0290_001094"
     CDS             complement(5050..6855)
                     /locus_tag="U0290_001094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464250.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyl-accepting chemotaxis protein"
                     /protein_id="HEM2301139.1"
                     /translation="MNLIKNRKLKTKLSINIVITTIMLIGLGATSFLGFRHVATLSDN
                     MVDNNVAPMKEIAKIQTNMAQINIDILTMFDTINGKSALIKDIDDLYAENDQAIHNFK
                     KANLTAEDKKQLAYFEEKLADMKSSASSVISDTSSALDDAELLGAQNRYYQNVKTKFD
                     DATKQLNVLNEMNYKEVENSSQAISDFGVKISIIFTAVIIAVLISLFIFNAYITRVIL
                     KGIRHLQTAVHKVASGDLSYRSTYNGRDELGDITNDLNEMSENLRLMIEDVKKASTDV
                     KSSSDNVIISSEIISAMTTEMDIEMKMMGEQIQTQIGSMKESTDAMDQMTGGVQNVAE
                     YALKVSDLTKDSAEKTNDGIAVINNLVSQMDRISGVMRSSTDVVSQLVNRVGEVEKAL
                     DTVTNIADQTNLLALNAAIESARAGEHGRGFAVVAEEVRKLAEQSRLAVVDINTVLKK
                     IQTESKTTIEVMNTGLSESEAGQKIISETEATFTDLLNRVNDISAQMQNVSQETEEMA
                     AGIEEVNTSISDVTEISNQIGEKSTAALEFAEVNKMKVDELVVISEEMQKISGSLEGY
                     IANFNTEVSEEAVEVTEEPESETKDPGEPVLAENV"
     gene            complement(7016..8746)
                     /locus_tag="U0290_001095"
     CDS             complement(7016..8746)
                     /locus_tag="U0290_001095"
                     /EC_number="1.2.3.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate oxidase"
                     /protein_id="HEM2301140.1"
                     /translation="MKKVKASETLVQTLKNWGIDHVYGLPGDSIDTVVDALRKEQEAI
                     EFIHVRHEEVATLAAAAYTKLTGKIGVALSIGGPGAIHLLNGMYDAKMDHVPMLVLAG
                     QVTTDVLNTGFFQEVNLPAIFEDVAVYNKQIDNAETLADVVDEAIRTAYKEKGVAVLT
                     IPNDIPSQVIKASLEAKTVKFEQENPKLDEAAIQEAVARIEKAEKPVILAGLGTKHAG
                     PELIAFSEKLKIPIIHSLPAKTIVPDNHPNALGNLGKIGTKPAYEAMQETDLLLMFGN
                     DYPYSDYLPKKADCIQIDIDPAKISKRFPATVGLVGDAAEIIGNLTAKTAPVEERKFL
                     QACQENMQEWWKWLEEDIAQTTDPIAPEVVMANIQKIADKDAIFSIDVGTATVWSTRY
                     LHLTPQNDFIVSAWLGTMGCGLPGAIAAKKAFPDRQAIAIVGDGGFSMVMQDFVTAVG
                     LNMPMIVVVLNNQQLSFIKYEQQSAGELNYAIDLPDINYAKFAESCGGIGFRVEKMAD
                     LEAAFGNAKLATKPVIIDVSVDSAAAPLPGKIVMDEALGYTKFEIQSVLEDHRFAKMP
                     PLKTILRRFL"
     gene            9017..9664
                     /locus_tag="U0290_001096"
     CDS             9017..9664
                     /locus_tag="U0290_001096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor G-binding protein"
                     /protein_id="HEM2301141.1"
                     /translation="MKEFIEPYQYNFIKNQLANVSRAYRSANDTSTLKALKSLTEEKI
                     NELFPESVLEEHKELFSELHAITSTKEAEPFLDGLKAYVIPFAPPSDVKLKKLFAKTK
                     KLKIPAWSKLDLRDYTFYGWNDIAQQRKYIVTYEDGNLVGVQGTISTEIQKGVCSICH
                     SHSKVSLFMAKTKSSSDGIYTTNGNYICYDSDVCNQQIKTHETLDEFIEVVKKRK"
     gene            complement(9707..10030)
                     /locus_tag="U0290_001097"
     CDS             complement(9707..10030)
                     /locus_tag="U0290_001097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1048 domain-containing protein"
                     /protein_id="HEM2301142.1"
                     /translation="MFNWYKKYREEKRDYKQYKKRIAALPEDYKTAMKAIETYLWNFA
                     KGAGMFEILKNVLEMFENAAADNLELKAVVGDDLAEFADNLLSEFPEETWMDKQRQKL
                     RDSIK"
     gene            complement(10030..10356)
                     /gene="lftR"
                     /locus_tag="U0290_001098"
     CDS             complement(10030..10356)
                     /gene="lftR"
                     /locus_tag="U0290_001098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464246.1"
                     /note="act as a regulator of LieAB which is involved in
                     aurantimycin A resistance; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PadR family transcriptional regulator LftR"
                     /protein_id="HEM2301143.1"
                     /translation="MKGLTELLKGSLEGMILERISRGETYGYEITKYLNDLGFDEIVE
                     GTVYTILVRLEKKGLVEIEKKKSELGPPRKFYTLSPAGEEELAIFWKRWDFIQGKIMQ
                     VKGGQA"
     gene            complement(10475..11119)
                     /locus_tag="U0290_001099"
     CDS             complement(10475..11119)
                     /locus_tag="U0290_001099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301144.1"
                     /translation="MGNWQQKWESWRDMTVAMQQEIKIEAAEKVTSYIKNDQFEEAIN
                     VIRQTENLLNELDFETKMNRVEEQLQAFTSDQEAAKSFEASQLQNLEKPSTKVSFDLS
                     HVKSEAINQFTKRDFNLVDSNDTHMQFLKGNRNFYMDIFNPEESEEYHYANLDEKCQY
                     KNIGFICQNDAAAEIATKLTNEWLETLEAPKKKFLTVNIANLNAMKQNQEVLFQ"
     gene            complement(11133..11801)
                     /locus_tag="U0290_001100"
     CDS             complement(11133..11801)
                     /locus_tag="U0290_001100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic transglycosylase domain-containing
                     protein"
                     /protein_id="HEM2301145.1"
                     /translation="MNPVEQVISARQAEFQSAFEAAKQSATTFETKLNERLNETTTAK
                     TTSVLTVTDAELTRAREAYEALINQSDTNSAASASSTTTETPTTSTGESTNWNNYQIK
                     PISAENEGKYSDLIKTSAAKYGVPEALIKRVIQVESNFNPNVVSSAGATGLMQLMYGS
                     NRTDPATNIDAGTKQLAGYIKKYDGDLKLALAAYNAGPGNVRKYGGVPPFKETQNYLT
                     KIIG"
     gene            complement(11818..13119)
                     /gene="fliI"
                     /locus_tag="U0290_001101"
     CDS             complement(11818..13119)
                     /gene="fliI"
                     /locus_tag="U0290_001101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein export ATPase FliI"
                     /protein_id="HEM2301146.1"
                     /translation="MNWSPKTEAWQELKNTVPYIQKGKIHTVQEQVYISKGPQVKIGD
                     TVMVGENKVLCEVISIEKENNMLLPFNQSDKVAYGDWVYVTDTKITIPADEYLLGKVL
                     NASGDILNEEAGVAKFKQKMPLEAPPIHAFSRAEITDTLETGIKAIDGMLTIGIGQKI
                     GIFAGSGVGKSTLLGMIARNAKADINVIGLVGERGREVKDFLRKDLGEDGLRKSVIVA
                     ATSDESHLMQLRAAKLATSIAEHFRDQGKTVLLMMDSVTRFADARRSVDIAVKDLPIG
                     GKTLLMESYMKKLLERSGKTQNGSITGIYTVLVDGDDMNGPVPDLARGILDGHIVLTR
                     ELATKNHYPAIDVLGSVSRVMEEIVPESQWKTASKIREWMSIYQENELYFKLGTIEQT
                     SDNAAIFTSKEKSYFIHQFLKQLRDESVTLEETSKLMETLV"
     gene            complement(13116..13808)
                     /locus_tag="U0290_001102"
     CDS             complement(13116..13808)
                     /locus_tag="U0290_001102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar assembly protein FliH"
                     /protein_id="HEM2301147.1"
                     /translation="MSLSNPRIPKGKVTLSDVKMELFYLDDIEETEEVESPYSKELEQ
                     LESHQKELEKHLSAIEIEQQKLANEKAALQAERQAIEELKREAETEIEANKQAFEKEK
                     TQMYLTITDFLWDESIDLAERIVHQAIDTRQIEVLPMLTEVIQKLPVAFDKLNVTTHP
                     ETLKALKEENTGTKYDWLLENIHWNFDMRLDYGEFTVEEEKEYFDYRITEIFQTLHKQ
                     NAERKILGGDKP"
     gene            complement(13795..14901)
                     /gene="fliG"
                     /locus_tag="U0290_001103"
     CDS             complement(13795..14901)
                     /gene="fliG"
                     /locus_tag="U0290_001103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliG"
                     /protein_id="HEM2301148.1"
                     /translation="MAETLKETLEETNAELETVEVEETEEKTTTSADSGISRREKAAL
                     IIWSLDEQIATEVVDLLPDASKQRLAREMAKMKEMDGGAVEEATREFLGELELLSGGI
                     AKLDREHLQRLFPDMTTEELNQLIYGVEAESRIGETALDILREIDDVDSLFTIISDES
                     PQTIAMIASYMKPEEASKLLALLPEEKMINTVIGIASLEQFDSEVMQNVSNLLRIKLD
                     TMSNSSLNKTDGIKNVANILNNVTRGLERTIFEHLDAEQAELSERIKEKMFMFEDIIL
                     LDNMTLQQVLAEIQDNNKIARALKNEKEELKEKILSCVSKNRRDMITEELEVLGPIRL
                     SDVEQAQQDIANVVKNLEKDGKIVIQRGEQDVLI"
     gene            complement(14904..16556)
                     /gene="fliF"
                     /locus_tag="U0290_001104"
     CDS             complement(14904..16556)
                     /gene="fliF"
                     /locus_tag="U0290_001104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar M-ring protein FliF"
                     /protein_id="HEM2301149.1"
                     /translation="MAKIKTMYSKLKNWHKGAILVGLFVVVTVLLLYMNTPKTEVTLY
                     KNLSETSQQQVTDQLAKMGVDYTVDKSGNILVDEKVETLVRDKFADLGIPYTGQDGND
                     ILLNSSLGASEEDKKMQEKVGTKVNLEKEIVQSYGTTIDSASVQLTLPESSSIFEEAS
                     QKGTAAVTLKTKNNQTLTSEQVLGIQRTVSAAVPNVASDDVAIIDTKNGVISEADTSK
                     EEGSSAYKNEVDIQNAIGKNVKTDIEGTLSSIFALDNFRVNTNVSVNFDEIKQNTEHY
                     PNDGKVRSNQKDTSTDTSKGSANTTESGTASNADVPNYTEQNGDDTNTYTSEKSSETT
                     NYELDSTIQEIKKHPALAKTNVVVWVDQNALNKNGVDMAEFTKAIGVSAGLTPNMTTE
                     EAGADGEAAAAPTFEGTFQNGDVTIMPIQFLDNATPAEKDTTEKAAPASKAWIWWLAG
                     SLLFAIIAAGIIAYIIFLKRKEQLEEALEPEEKDYIPAEEAIINPEEHPDFNFQTDAF
                     DLSEPELKARKESLKNKLGEMAKEDPGRAAAVIQKWLNERQE"
     gene            complement(16624..16920)
                     /gene="fliE"
                     /locus_tag="U0290_001105"
     CDS             complement(16624..16920)
                     /gene="fliE"
                     /locus_tag="U0290_001105"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-basal body complex protein FliE"
                     /protein_id="HEM2301150.1"
                     /translation="MAIESINAASVLPKVTLGETAKTDNATGAGNTFTQMLDSMSDTQ
                     SNAQTSVSNLLTTGEGNASDVLIQMKKAESEMKTAAVIRDNVIESYKQLLNMQV"
     gene            complement(16937..17347)
                     /gene="flgC"
                     /locus_tag="U0290_001106"
     CDS             complement(16937..17347)
                     /gene="flgC"
                     /locus_tag="U0290_001106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgC"
                     /protein_id="HEM2301151.1"
                     /translation="MFEGINTSGSALNAAKQWMEVSSNNIANADSSAAPGETPFLRKR
                     VVLSEITPFETALTGTKGVKVSEISSDTGSVKRVYDPTHPNANEAGYVNYANVDMTAE
                     MTNLMVGQKMYAANTSALQANEKMMEKDLEIGKV"
     gene            complement(17359..17760)
                     /gene="flgB"
                     /locus_tag="U0290_001107"
     CDS             complement(17359..17760)
                     /gene="flgB"
                     /locus_tag="U0290_001107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal body rod protein FlgB"
                     /protein_id="HEM2301152.1"
                     /translation="MENYTTHIGNYLNYLQTANQVVSNNIANANTPNFKASEASFEES
                     FGSSLRASGQNSTESAGNLTKTNTKHLAGTDIDETNAKVTTKSGSINEDGNNVNVTSE
                     MISLTKNNQMYALAISALNYNSSINTAARGK"
     gene            complement(17781..18062)
                     /locus_tag="U0290_001108"
     CDS             complement(17781..18062)
                     /locus_tag="U0290_001108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301153.1"
                     /translation="MNQAKTHLVELKALFHSTGQLNVTLEEYQAKLNELLKSTEHLPK
                     DTKEAILKETREVINKGILFTQKQLESTENAFSENKSRNAANLNYAKFF"
     gene            complement(18034..18420)
                     /locus_tag="U0290_001109"
     CDS             complement(18034..18420)
                     /locus_tag="U0290_001109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar protein FliS"
                     /protein_id="HEM2301154.1"
                     /translation="MQAWKRYTQNELNTSNPIKNTIYIYERCIIEFKKLDKALEQLHF
                     SEADLILDKMEKIFEELKLQLNPEAGQELYDNIFGLYEWISEQIRQMQLLKQPVNIDT
                     IIHVITQLKEGYEGVMKHESSKDTFG"
     gene            complement(18439..19728)
                     /locus_tag="U0290_001110"
     CDS             complement(18439..19728)
                     /locus_tag="U0290_001110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein 2"
                     /protein_id="HEM2301155.1"
                     /translation="MGSSIASSLMDPTQYYSQFISLQKASLEKAKTPYQNQISSYQSR
                     IDLYASLKNALSESLKTMSSFTTYESKTKLATSSNETSFTVSSTSSSVNGSYSIEVQN
                     LATADTYNKAVPDIEAKIGVSGTIKINGKEIKVDADSSMKNVMNSINSAGAKVNIYTL
                     GENMVVTSSTTGVENSIKFEGDSAVLDALGLVQNSPDHLAAEDAKLRINGATVTSATN
                     KVTNYIPGVTINLKKETTGAEKLTIQDQSDEKAASMITSFVNTYNALTSTMKTYTGKG
                     TILQASAVDLEANRALNNVFQHKKDGNTLFDFGISVDKEGVLKVDETAMKKMVAEDPT
                     AVERFFFGIGGIGDELYQSLNKTFGSTGFISDETTSMTNEINKLNLKLTDITSRNDTL
                     LTNITDQYNKWLEMMQAMQSDAMTLDALIDGMNSSNK"
     gene            complement(19740..20615)
                     /locus_tag="U0290_001111"
     CDS             complement(19740..20615)
                     /locus_tag="U0290_001111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein 3"
                     /protein_id="HEM2301156.1"
                     /translation="MRISTNQQANSIINQLNNVSGNLAKYQLQVSSGKKYESMSENPG
                     ATAQILSYNHVLSQLNREKTDVTEAKSLLNTAETSLSSMSTSMNRVNALVLQAINGTS
                     DKDNMSQSAEEIKGLLDVLISVANSEDDGRYVFSGSSTSVKPFTTDKTTGEIIYNGTT
                     ENKKFRVTDTLEVEVFHDGSAMTDVFNNIQKIVDAMKTGDKDALSALQETNSKNIEII
                     TNSMTNIGGQKNGVTAYDNVLSSKIVDFSERKSNVEEVNMPEAVSNLNKTSIAYQAAL
                     QSSVMVQKLSILNYM"
     gene            complement(20627..22147)
                     /gene="flgK"
                     /locus_tag="U0290_001112"
     CDS             complement(20627..22147)
                     /gene="flgK"
                     /locus_tag="U0290_001112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-associated protein FlgK"
                     /protein_id="HEM2301157.1"
                     /translation="MRLSDFNTSLSGMSAAQIANMVAQQNISNMNTPGYIRQAVDQTA
                     VYGDGGLLGGKQTGYGVKVTDIKRLTNTALTTQYNNQIAKQSASLYQSGALGQALNLF
                     GTPGKNTPSDNLDNFFTAWAALAKNPDQATNTTALLSSMSIFTDQLNQLHSGLKELET
                     TIAADTDAAIQDLNSLIKKLGSINKAIGNAGSNPPNDLLNQRDQLLSTMAGYAGISVS
                     AHPNNPDVYDVTIGGRLVVQGDETTEITSTRTATGFEFSVDGQKLNMPEGSIIASVRV
                     NQNEIKSYQEKIETFSNSLAKALDDIQVKNVNKTMDDLQKINDALKANPNDEKLLSNR
                     DELLRQLEKFPGVTRSGDTLTIGGVDHAIDTLGTSTYVTDVNDFSIPIFTQSSGKWIL
                     NPAITSNADNKPFLGVIAADIASLKTDKNIQGTTFPSFMDGIITEVATDASKSSATST
                     ADTQALNSLSESKSSLEGVNIDEEMTNIMQYQSYYVANTKAMNTVNDMMKALLAML"
     gene            complement(22167..22595)
                     /locus_tag="U0290_001113"
     CDS             complement(22167..22595)
                     /locus_tag="U0290_001113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Myocilin"
                     /protein_id="HEM2301158.1"
                     /translation="MQNELINQLEILIEKNVKATDAAILLGKLVQEENWIDAEERQLG
                     LQRELAALQNEYQALKTIIGEDNTLRTLQNTWTPAENAIIDERKKMLLEKENLLRVSV
                     TENQIRTEMQLAFSEHMVDVITGHHAETQAENNMMINETF"
     gene            complement(22605..23069)
                     /locus_tag="U0290_001114"
     CDS             complement(22605..23069)
                     /locus_tag="U0290_001114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YaaR family protein"
                     /protein_id="HEM2301159.1"
                     /translation="MNNVSIGQISQSKQTNVVRGMQELNQTQQLYFEQMKANGKKQTP
                     SLTEINELITNVTDKKSLVEMDMTVDNVLSYKKAVQTFLNFYVNNVMDYDNIESRHPK
                     YGFSQKMTILKQVEKQTNELDDVMNLIDTKTGHLDMLNRIGEITGMILDVVL"
BASE COUNT         5633 a         4551 c         4577 g         8364 t
ORIGIN      
        1 ttttaataaa aaaagacctt tcaagtgaaa ggtctcagat atcttcacgt tctagccata
       61 aactaaggag tacatcattt tcttctttaa tatcttcttt tgtcatttcg ggcttaatat
      121 ctactttttc aagaatttca aattgaatgg tgtcaatacc atattccttt gcttcttttg
      181 ccatttctgg tggtagcata tttcccgctc caattttcac tccgaaagca agtttattgg
      241 cgattccttt taaatccatt gtgttatcaa ttaaggattt accacttttt gtactgataa
      301 aacggtaaac gccggcatcg ggagattttt ctttatatgc acgaattagt tctttacgat
      361 tgtctttatt caattatttc acgtccttaa taacctgctt cttgtaatag tttgcttaat
      421 gttttgaggc gttcgctgag gagttcatca tcatttttta aaacttgttc gaacaattgc
      481 atgtcctcat cgatatattc gttatcttca caaacagcaa tagtcagcgc atctccttgc
      541 aaaccgatgc gatcaagcat aggattttct ttgtcataaa aatgaggtaa gcggtaagca
      601 tctttgaaat ggactttggt tctagcaatt aaaatggcca aatcaagcac acggtgtagc
      661 ggaagttctt cggattggcg tgaccattta tcaccagtat gacgccatac tttggctgaa
      721 atatctactt taccccgatc attccactgt gcaagtccga gcgaaagtcc tttcgcatca
      781 gaatggtaag cgttcttgcc atctacttct tcataatttt caacaacgat tactggttta
      841 tgttttaagg tagttggaat cttcataaga tttctccttt taatttttag taatttacta
      901 aattagtata ttactaattt tataaaatgt aaagaaaaac tttcctaatt actcggaaag
      961 ttcgtttttc atatgtaatt gttgaagtcc atctgacaat ccgacttcga tggtacgatt
     1021 gttcgttaca ttcactattc ctgagtctgt ttgatacgta cctgttgccg ggagaacgta
     1081 atcatctaag ccagtcatct caccattttc tacaattcca gtaatatacc acggatggcc
     1141 taagagctct tccgcttctt gaaaatgacc gcgccgaata aacgctcgaa tgttggtgga
     1201 acttattttg gtttgatttg tttcaataac cgggacagat gtgacaccaa tatcataggg
     1261 cttgcatagg tcccggagta aatctacgtc agaatcgcgc cctttcccaa aattaaattc
     1321 agaaccaacg acgatatgcg ataaattcaa attggttaaa tggtctctga caaactcttc
     1381 tggtgtcgtt tccgcatacc gaggtgtgaa tgctgtttcg attaaatgat cgacaccgta
     1441 atgcgcgagc caacgttctt tttccattct tggtgtgagc atttcgcggt atatttcgat
     1501 ttgttttaaa gcccaaagcg gatgtggact gaaactaata gcggttaata tttcattttc
     1561 tttttttatg gataaggctg tatttaaaat ggtctgatgg ccgatatgta ccccgtcgaa
     1621 tttgccgatt gttaaaactg cggggcggct atctttattt ggttcgagtg ttacgtgtga
     1681 tacttccatt ggctgatttc ccccattcct ctctaagttt atagtataac aagggcgtcg
     1741 tgcaaattta ttgattacat aaaaaaagac cttttctaat ttcgaaaagg tcttgaatac
     1801 tttattctac tgtgacactt tttgctaagt ttcttggttt atcgacatca cagtcacggt
     1861 gaagtgctgc gtaataagct aataattgac aagggataac gctcgctagt ggtgttaata
     1921 atggatgcac ttgcggaata acaaagcggt cacctggttg cgcaacgttt tccattgcaa
     1981 atacacaagt ttttgctcca cgcgctaaga cttcatttac atttccgcga atattccagt
     2041 tgatagattc ttgcgtgata agcgctaaaa ctggtgtgcc gtcttcaata agcgcaatag
     2101 taccatgttt taattcccca cttgcaaaac cttctgcttg aatatatgaa atttctttta
     2161 gtttaagtgc tgcttccatc gctacgaaat aatcgatgtt tctacctaag aagaaggcgt
     2221 tacgagaagt cgctaagtat tcgcccgcaa tatgttcgat aacttcttta ctagaaacca
     2281 ttgcttccat tgcagttgca acgataccta attcagcagc taaattaatg ctaagcgctt
     2341 cagcatcacc aatttcgcga ccaagtgaaa ctgcaagtac tgctaaaacc gaaatctgtg
     2401 cggtatatgc ttttgttgat gcaaccgcaa tttcaggtcc agcatagaga tacatcgaat
     2461 gatccgcttc acggtcaagc gtagagcctg gtacgttcgt taatgtcagc gtccggtaac
     2521 caagttcttt cacttttaca agacattggc ggctatcagc tgtttcccca ctttgggtaa
     2581 tgaaaatgaa taacggcttt ttagacatta gcggtaaatt atagccaaat tcactagaaa
     2641 catgtacttc tacaggaatt ttcaccattt tttcgattaa attttttccg actaaaccag
     2701 catgatagct cgtgccacaa gcgacaatat gaatacggtc agaagataaa atttcatcaa
     2761 gaattgtttg atcgacattg atttccccag cttcattttg gtaagcttgg atgattttac
     2821 gtgttactgc tggttgttca tcgatttctt ttaacatata atgcgggtat gtgccttttt
     2881 cgatgtcaga tgcatctaat tcagcagtgt agctcgcgcg gctaatttct tccccttcta
     2941 atgtttctaa tgtaaaaccg tcttttgtaa cgataacgat ttctttatcc ataatttcca
     3001 cgaattcatc tgtttcttta agaacagcca ttgcatcact tgcaataacg ttgaagtttt
     3061 cgccttttcc gattagtaat gggcttttgt tttttgctgc gtatagtgtt tctgtatcgg
     3121 tttggtcaat taagcagatc gcgtaagaac catgaagtaa cgataacgct tttttgaatg
     3181 cttctttagt cgaaagttct gctgcaaaga gttcaataag ctgaacgatt acttctgtat
     3241 ccgtatcact aacaaatgaa tgatttttta agtattcttc ttttaaaagg gtatagtttt
     3301 cgattacgcc gttatgaacc attgtaaaac gaccagattt gctttggtgc gggtgggcgt
     3361 tttcgtgatt tggtttaccg tgcgttgccc agcgtgtatg tccgattcct gttgtaccga
     3421 atgcatcact tggtacaagg ctcgcaaggt ctgcaatccg tcctttttct ttaactactg
     3481 ttactaggtc tttgttttgc aaagcgattc ccgcagagtc atagccgcgg tattctaatt
     3541 tttcaagtcc ttctaataaa atgccttttg cattatttgt tccaatatat ccaacgattc
     3601 cacacatagt aaattcctcc aataataaac ttgagggcag acttatccaa tttcaagccc
     3661 tctacatttt ttggtttcct tggagggtaa aaaacatgtt tcattactac tctgtccact
     3721 tggtcaccca agtgatttgt aagtaagact taacgactgc atgcacagcc gggagactcc
     3781 cgccgaaact tcgattaatc tcctcctcgt caactgactg tttacttttc agggatttca
     3841 ccttcaagta ttttcgttcc aatcagttct ggcgcttcta tttaattgta cgatcctcct
     3901 tcactacttt tcaaggaaac aaattcattt tacaataata tgtatactag gtcaagcatt
     3961 atatatagcc gtttgtttaa aattggtcta tacattgaca aaaaataaca aatgactaat
     4021 aatatagtta tgatacaaaa aggagcgagc tgaatggttt ttgcaaaaaa attagttgct
     4081 agtattgctg ttttcatttc acttggattc atttatttcc gagaaagtac agctgtcgca
     4141 tttgaaagta caaatactgc ttcctttctt ccttctaccg gagatgcatt ttcggtttgg
     4201 ccgattgtta ttggagtggt gcttgtcgcg cttgctgtcg tcctatttat taagaagaaa
     4261 atataaaaaa tcgtttgaga gcatgagata tgctttcaaa cgattttttt atgggtgact
     4321 taggtaaatg gcttgctttc ccatagcaga ccagccttct tcaagtacac ttctttttac
     4381 ggcacggttt ttatgtccat atgggtcatt aatataaaaa ttgtctttat cgaacccggt
     4441 aattaccaca ctgtgcatcg aatacgtgat tttcttttta ccttcttttg tttggacggt
     4501 ttgccagttt ttgggtgcat ggtagtcggt ggtagtgata atccatactg gtgcgcctgt
     4561 gctgagtaca gtaatgatgt cttgaatgct attcccgcta atatcgtgga cgtgtgcttc
     4621 attaacgtat ttagcagcca gattagctat gggagcatga ttcacgccta gaccagggct
     4681 atcgccgcta atgctcccaa caaatgcttt atccggatta ccgtgtaaac cattttgttc
     4741 gattggtgtt gttgggagat tattcgctaa ctcatttttc gttacacgct ttccattgaa
     4801 ttgtaagagc attgctaaac tcgttacttc gcagccatta aaaagcgtag gagcatccat
     4861 ttgattcact agtggcacat ctaatcttac attaaaaggt tcgttgtcta atttataaac
     4921 gactttggcg ctttcgagtt tgacggttgg tgaataaaag gtatatttcg tatttagaag
     4981 ggtcaaacta aatatacacg ctgtaatgac aagcagtgat tttatccaaa ttcgcattat
     5041 acatgcttcc tagacatttt ctgctaggac tggctctcct ggatcttttg tttctgattc
     5101 tggctcttct gttacttcga ccgcttcttc gctcacttcg gtattgaagt tggcgatata
     5161 cccttctaat gaaccggaaa ttttttgcat ttcttcggag ataacaacta gctcgtccac
     5221 tttcattttg tttacttctg cgaattcaag tgcagcagtg gatttttcac cgatttgatt
     5281 ggaaatttct gttacgtcgc taattgacgt gttgacttct tcaattcccg cagccatttc
     5341 ttcggtttct tgagatacat tttgcatttg agcggaaata tcattgacac gattgagtaa
     5401 gtctgtgaaa gttgcttccg tttcagaaat gattttttgg ccagcttctg attcggaaag
     5461 acctgtgttc attacttcga tagtagtttt tgattctgtt tgaatttttt tcagaacagt
     5521 attaatgtca acaacagcaa gtcgtgattg ttcagctagt ttgcggactt cttcggctac
     5581 gactgcaaat ccacggccat gttcaccagc acgagcagat tcgattgccg catttagggc
     5641 aagcaagttg gtttggtcag cgatatttgt aacggtatcc agcgcttttt ccacttcacc
     5701 aacgcggtta actaattgag aaacaacgtc tgtacttgaa cgcataacgc cgctgatacg
     5761 atccatttga gacacgagat tattgataac ggcaatgcca tcgttcgttt tttctgcgga
     5821 atcttttgtt agatcagata ctttaagcgc gtattcagcc acattttgaa cgccgccagt
     5881 catttgatcc attgcatccg tgctttcttt catgctgccg atttgtgttt ggatctgttc
     5941 acccatcatt ttcatttcga tgtccatttc tgttgtcatt gcagaaataa tttccgaact
     6001 aataataacg ttgtcactgg aagatttaac gtctgtagaa gcttttttaa cgtcttcaat
     6061 cattaatctt aggttttcgc tcatttcatt caagtcgttt gtaatatcac caagctcgtc
     6121 tctaccgtta taagtgctgc ggtacgacaa atctccacta gctactttat gtacagctgt
     6181 ttgcaagtgt cggattcctt ttagaatcac tcttgtaata taagcgttaa aaatgaatag
     6241 agaaattagc acggcaataa taactgctgt gaatatgata ctgattttta caccaaagtc
     6301 agaaattgct tgagaagaat tttcgacttc tttgtagttc atttcattta aaacgtttaa
     6361 ttgtttagtt gcatcgtcaa attttgtttt gacgttttgg tagtatctgt tttgcgctcc
     6421 aagtaattct gcgtcgtcta gtgcgcttga tgtgtcactg attactgagg atgcggatga
     6481 tttcatgtcc gctagttttt cttcaaagta cgctaattgt tttttatctt ctgctgttaa
     6541 attggctttt ttgaaattat gaattgcttg gtcattttcg gcataaagat catcaatatc
     6601 ttttataaga gctgattttc cgttaatagt gtcgaacatg gtcaggatgt cgatattgat
     6661 ttgcgccatg tttgtttgga tttttgcgat ttctttcatc ggtgcgacat tattatcaac
     6721 catattatct gaaagtgttg ctacatgacg aaagccaaga aagctagtcg cgccaagtcc
     6781 gattaacatg atggtcgtta taacaatatt gatgcttaat tttgttttca atttacgatt
     6841 tttaattaaa ttcacccatt ccacactcct attctctaat tctaatttat tatctcatat
     6901 tttttaaaaa aactccatat tttattgtaa aataattagt tttaataaaa aacgttataa
     6961 taattagcga gaatcggcat gaaacgggtg ataatgttat ttttttattt gttttttata
     7021 aaaatctgcg taaaatggtt ttaagtggtg gcatttttgc gaaacgatgg tcttctaaga
     7081 ctgattggat ttcgaattta gtataaccga gcgcttcgtc catcacgatt ttaccaggta
     7141 gtggagcggc tgcactgtcc acggaaacgt cgatgattac tggcttagtt gctagtttag
     7201 cgtttccgaa agcagcttct aggtccgcca ttttttctac tcggaaacca attcctccac
     7261 aactttcggc gaattttgcg taattgatgt ctggtagatc gatggcgtag tttagttcac
     7321 cagctgattg ttgttcatat ttaatgaatg aaagttgttg gttgtttaac acgacgacaa
     7381 tcattggcat gtttaaacct actgcagtga cgaaatcttg catgaccatg gaaaagcctc
     7441 catcaccgac gatggcgatt gcttggcggt ctgggaatgc ttttttggca gcgatagctc
     7501 caggtaaacc gcagcccata gtaccaagcc acgcggaaac gataaagtca ttttgtgggg
     7561 ttaaatgtaa ataacgagtg ctccaaacag ttgcagttcc tacgtcgata gagaaaatgg
     7621 catctttatc agcgattttt tggatgttcg ccattacgac ttctggggcg attggatcgg
     7681 ttgtttgtgc gatgtcttct tctaaccatt tccaccattc ttgcatgttt tcttggcatg
     7741 cttgaaggaa tttacgctct tctacaggtg cggttttcgc ggttaaatta ccgatgattt
     7801 ctgcggcatc gccaactaaa ccaactgttg cagggaaacg tttgctgatt ttggctgggt
     7861 caatatcgat ttggatgcag tcggcttttt ttggtaaata atcgctataa gggtaatcat
     7921 tcccgaacat taatagtaag tcagtttctt gcatagcttc atatgctggt ttggttccga
     7981 ttttaccaag gtttccgagt gcatttggat ggttatctgg aacaatggtt tttgctggta
     8041 aggaatgaat aatcgggatt ttcaattttt ctgagaaggc gattagttct ggtccagcgt
     8101 gtttagtccc taatccagct aagataactg gtttttccgc tttttcaatc cgtgctacgg
     8161 cttcctgtat tgccgcttca tctagttttg gattttcttg ttcgaatttg actgtttttg
     8221 cttcaaggct cgctttaatt acttgtgacg ggatatcatt tggaatcgtt aggacagcga
     8281 cgcctttttc tttataagcg gtgcggattg cttcatcaac cacatccgcg agtgtttcgg
     8341 cattatcaat ttgtttatta tacacggcaa catcttcaaa aatcgctggt aaattgactt
     8401 cttggaaaaa gccggtgttt aagacgtcgg ttgtcacttg cccagcgagt acgagcattg
     8461 gcacatgatc catttttgca tcatacatgc cgtttagaag atgaattgct ccggggccgc
     8521 cgatagataa tgcgacacca attttgcctg ttaatttggt atatgctgct gcggctagtg
     8581 tcgccacttc ttcgtgccga acgtgaataa attcgattgc ttcttgttct tttcgtaagg
     8641 catcaactac tgtatcaatc gaatcaccag gtaaaccata tacgtggtca atcccccaat
     8701 tttttaatgt ttgtacgagt gtttcacttg cttttacttt tttcatttta ctttctcctc
     8761 ccatggatgt tttctctaat gtccaatagt tttcgtttac cctgttttta aaagagtatt
     8821 cataaaagag aattgacgaa ctattcagaa gtgcttataa tgaaggcaag gtggtgatca
     8881 aagagatgca aacaaaattg cactgctctc gactttctaa caatggcttt aggattgttt
     8941 agaaagtaag agtgaaataa actcttcaat ccttcagcta gtttaaccaa cattaaacta
     9001 ttaaaggaga attataatga aagagtttat cgagccatac caatataatt ttatcaaaaa
     9061 tcaattagcc aatgtttcac gcgcataccg gtccgccaat gatacttcga ctttgaaggc
     9121 gttaaaatcg ttaacagagg agaaaatcaa tgaactattc ccggaaagcg tgctagagga
     9181 gcataaggaa ctgtttagcg agctccatgc gattacttca accaaagaag cagagccgtt
     9241 tttagatggg ttaaaagcct atgtgattcc tttcgcgcca cctagtgatg tgaaacttaa
     9301 aaaacttttt gcgaaaacga aaaaattaaa aattcccgcc tggtctaaac tagatttgcg
     9361 cgactatact ttttacggct ggaatgatat cgctcagcaa cgtaaatata tcgtgactta
     9421 cgaggacgga aatttggtcg gcgtacaagg aactatttcg acagagattc aaaagggtgt
     9481 ttgttcgatt tgtcactcgc attccaaagt atcgctcttt atggcgaaaa cgaaatcttc
     9541 gagtgacggc atttatacga caaatggtaa ttacatttgc tacgatagtg atgtgtgtaa
     9601 tcagcaaata aaaacccacg aaacgttaga tgaatttatt gaggttgtta agaaacgcaa
     9661 ataaaaaaca gaaagtctct catttttttg agaggctttc tgttttttat ttaatcgaat
     9721 ctcgcaattt ctgacgttgt ttatccatcc atgtttcttc cggaaattca cttagtaagt
     9781 tgtcggcgaa ttccgctagg tcatctccta caacggcttt taattctagg ttgtcggctg
     9841 cggcgttttc gaacatctcg agtacattct ttaggatttc aaacatccca gcgccttttg
     9901 caaagttcca taaataggtt tcgatagctt tcattgcggt tttgtaatct tctggcaaag
     9961 cggctattcg ttttttgtac tgtttgtaat ctcgtttttc ttcgcggtat tttttgtacc
    10021 aattaaacat tacgcttgcc ctcctttaac ctgcatgatt tttccttgaa taaaatccca
    10081 acgcttccaa aaaatagcta gttcttcttc accagctggg ctcaatgtgt aaaattttcg
    10141 tggtggacct aattctgatt ttttcttttc tatctcgact aatccttttt tctccagacg
    10201 aacgagaatg gtgtagacgg ttccttcgac gatttcatca aagcctaggt cattgaggta
    10261 tttggtgatt tcgtagccgt atgtttctcc tctagaaatc cgctccaaaa tcattccttc
    10321 taaactacct ttgagtaact cggttagtcc tttcacttga attcactcct ctactagttg
    10381 ttactaggta caagtatata gtaatacaaa gtaggttagt tgtcaacctg tttgtataaa
    10441 aaaacctgct ctctttggcg agaacaggtt ttttctattg aaaaagtact tcttgatttt
    10501 gtttcatcgc gtttaaatta gcaatgttga ccgttaaaaa tttctttttc ggagcttcta
    10561 aagtttcgag ccattcgttt gttaattttg ttgcgatttc agctgctgca tcgttttggc
    10621 aaatgaagcc gatgtttttg tattggcatt tctcatcaag attagcgtag tggtattctt
    10681 cgctttcttc gggattgaaa atgtccatat aaaaatttcg attgcctttg aggaattgca
    10741 tgtgggtatc atttgagtct actaggttga aatcgcgttt ggtgaactga ttgatcgctt
    10801 ctgattttac atgtgatagg tcgaagctta cttttgtgct tggtttttct aggttttgaa
    10861 gctggcttgc ttcaaatgat ttagctgctt cttggtcgga tgtgaatgct tggagctgtt
    10921 cttcgacacg attcatttta gtttcaaaat ccagttcgtt taggagattt tcggtttgtc
    10981 tgatgacgtt aattgcttct tcaaattggt cattttttat gtaggaagtc actttttcgg
    11041 ctgcttcaat tttgatttct tgttgcattg ctacagtcat atcgcgccat gattcccact
    11101 tttgttgcca gtttcccatg gtttattctc ccttacccaa taattttcgt taaatagttt
    11161 tgtgtttctt tgaatggtgg tacgccgcca tatttgcgga catttcctgg cccagcatta
    11221 taagctgcta atgccagttt gagatcgcca tcatattttt taatataacc tgccaattgt
    11281 tttgttccag cgtcgatatt agttgctggg tctgtacgat tcgagccgta catcaactgc
    11341 attaaacctg ttgcaccagc acttgataca acgttcgggt taaaattgga ttctacttgg
    11401 atgactcgtt tgatgagtgc ttctggaacg ccatattttg cggccgaagt tttgattaaa
    11461 tcactatatt ttccttcatt ttccgcactg attggtttga tttggtagtt gttccagttt
    11521 gttgattcgc ctgttgatgt agtgggagtc tcggttgttg tgcttgaagc agacgcggca
    11581 gaattggtgt cggattgatt gattaatgct tcatatgctt ctcgagcgcg cgtaagttcg
    11641 gcatctgtga cagttagtac actagttgtt ttggcagttg tggtctcatt taagcgttcg
    11701 tttaattttg tttcaaaagt ggtagccgat tgtttcgctg cttcgaacgc gctttgaaac
    11761 tcggcttgtc tagcacttat tacttgttct actggattca tccacggcac tcctttgtta
    11821 tactaacgtt tccatcaact tactcgtttc ttcaagcgtg acactttcat cccgcaactg
    11881 ttttaaaaat tgatggatga aataagactt ttctttactt gtaaaaatcg ccgcattgtc
    11941 gctcgtctgt tcgattgtac caagtttgaa atatagttca ttttcttgat aaatactcat
    12001 ccattcgcga attttcgaag ctgttttcca ctggctttct ggaacaattt cttccattac
    12061 ccgactaacg gagccgagga catcaatggc aggatagtgg tttttggtgg ccagttcacg
    12121 tgtgagaacg atatgtccat ctaaaatccc ccgcgctaga tcggggactg gaccattcat
    12181 atcatctcca tcaacaagca ctgtataaat accagtgatc gagccgtttt gcgttttacc
    12241 tgaacgttct agcaatttct tcatatatga ttccattagc aaggttttgc cgccgattgg
    12301 taagtctttg acggcgatat cgacgcttct tcttgcatca gcaaaacgag tgacagaatc
    12361 catcattaga aggacggttt ttccttggtc gcggaaatgc tcggcaatag aagtggctag
    12421 tttggcggcg cgtagttgca taagatggct ttcgtccgag gtagcagcaa caatcacgct
    12481 tttgcgcagt ccgtcttctc caagatcctt acgcaagaaa tcttttactt cacggccgcg
    12541 ctcgccgact aagccgatca cattaatgtc tgctttggcg ttacgagcaa tcattccaag
    12601 taaagtagat ttaccaacac ccgatccggc gaaaatacca attttttgac cgattccaat
    12661 cgttaacatc ccgtcaattg ctttgatgcc tgtttcgagc gtatcagtga tttctgctcg
    12721 actaaaagca tgaattggtg gagcttcaag cggcattttt tgtttaaatt tagccactcc
    12781 agcttcttcg tttaaaatat cgccggatgc gttgagtact tttccaagga ggtattcgtc
    12841 tgccgggatt gtaattttcg tatccgttac gtacacccaa tcaccgtatg ccactttgtc
    12901 gctttgatta aacgggagta gcatgttgtt ttctttttca atagaaatta cttcgcagag
    12961 cactttattt tcaccgacca tgacagtgtc accaattttc acttgagggc ctttggaaat
    13021 atagacttgt tcttggactg tgtgaatttt tcctttttgg atgtatggaa cggtgttttt
    13081 tagttcttgc caagcttcgg tttttggcga ccagttcacg gtttatcgcc tcctagaatt
    13141 ttccgttcgg cgttttgttt atgaagtgtt tggaaaattt cggtgatgcg gtagtcgaag
    13201 tattcctttt cttcttctac agtaaattcg ccgtaatcga gtcgcatatc gaagttccaa
    13261 tggatatttt ctaaaagcca gtcgtatttt gtgcctgtgt tttcttcttt tagagctttt
    13321 aaggtctctg gatgggtagt gacgtttagt ttgtcgaaag caactgggag tttttgaatg
    13381 acttcagtta gcattggtaa gacttcgatt tggcgcgtgt cgattgcttg gtggacgatt
    13441 ctttctgcaa gatcgatact ttcatcccaa aggaaatcgg tgatagttag atacatttgt
    13501 gttttttctt tttcaaaagc ttgtttgttt gcttcgattt ctgtttcagc ttcgcgtttt
    13561 aattcttcaa tggcttggcg ttcagcttga agtgctgctt tttcgttagc taatttttgc
    13621 tgttcgattt cgatggcaga taggtgtttt tccagttctt tttgatgact ttctagttgt
    13681 tcaagttctt tcgagtaggg tgactcgact tcttctgttt cttctatatc atccaaataa
    13741 aacagttcca ttttcacgtc ggataaagtg actttacctt ttgggattcg cggattagat
    13801 aaggacatcc tgttcccccc gttggataac tattttgcca tctttttcca gatttttaac
    13861 gacattggcg atatcttgtt gggcttgctc gacgtcagaa agtctgattg ggccaagaac
    13921 ttctaattct tcggtaatca tatcgcgacg gtttttcgat acgcaagata gaattttttc
    13981 tttgagctct tctttttcgt ttttgagtgc tcgagcgatt ttattgttgt cttgaatttc
    14041 tgccaacact tgttgcaagg tcatgttatc aagtagaata atatcttcaa acataaacat
    14101 tttctctttg atgcgttcgg aaagttcggc ttgttcggcg tcgagatgtt cgaaaattgt
    14161 acgttctaaa cctcgggtaa cattgtttaa gatatttgcg acatttttta tgccatctgt
    14221 tttgttcagt gagctattcg acatggtatc aagcttaatt cttagtaaat tagaaacgtt
    14281 ttgcatgact tcgctatcga attgttctag gctcgcgata ccaataacag tgttaatcat
    14341 tttttcttcc ggtagtaagg ctagtagttt cgatgcttct tctggtttca tgtatgaagc
    14401 tatcatcgcg atggtttgtg gcgattcgtc gctaataatt gtaaacaagg agtcaacatc
    14461 atcaatttct cgtaaaatat ctagcgcggt ttcgccgata cgtgattctg cttctacccc
    14521 gtaaatgagt tgatttagtt cttccgtcgt catgtctggg aacaagcgtt gtaagtgttc
    14581 gcggtcgagt ttagcaattc ctcctgaaag aagttctaat tcccctaaaa attctctagt
    14641 tgcttcttct actgcgccgc cgtccatttc tttcattttg gccatttcac gtgcaaggcg
    14701 ttgtttggat gcgtcaggga gcaaatctac cacttcggtc gcgatttgtt cgtcgaggct
    14761 ccaaataata agtgcggctt tttcacgtct tgaaatacct gaatctgctg aagtagttgt
    14821 tttttcttcc gtttcttcta cttcgacagt ttctagttca gcatttgttt cttctaaggt
    14881 ttctttgagt gtttctgcca ttgttattcc tgcctttcat tgagccattt ttggatgact
    14941 gctgcggcgc gccctgggtc ttctttggcc atttcaccga gtttattttt caagctttct
    15001 ttgcgggctt ttaattctgg ttctgataaa tcgaatgcat ctgtttggaa gttgaaatct
    15061 ggatgttctt ctgggttgat gattgcttct tccgctggaa tgtagtcttt ttcttctggt
    15121 tctaatgctt cttctagttg ttctttacgt ttaaggaaga taatgtaggc gataattcca
    15181 gctgcaatga tggcgaagag taaacttcct gcaagccacc aaatccaggc tttgcttgct
    15241 ggtgctgctt tttctgttgt atctttttct gctggcgtgg cgttgtctaa gaactggatc
    15301 ggcatgatgg taacatcgcc attttggaaa gtaccttcga atgttggtgc ggctgctgct
    15361 tctccgtctg cgcctgcttc ttcggttgtc atattaggcg ttaatccagc tgaaactcca
    15421 attgcttttg tgaattcggc catgtcaaca ccatttttat ttaaagcatt ttgatcaacc
    15481 cagacaacga catttgtctt tgctagggct gggtgttttt tgatttcttg gatggtggag
    15541 tctagttcat aattcgttgt ttcacttgat ttttcgcttg tataggtgtt cgtatcatca
    15601 ccattttgtt ccgtgtaatt tggtacgtca gcgtttgagg cggttcctga ttccgtcgta
    15661 ttcgcggaac cttttgatgt gtctgttgat gtgtcttttt ggttgctacg tacttttccg
    15721 tcgtttggat aatgttccgt attttgtttg atttcgtcaa aattaaccga gacatttgta
    15781 ttcacgcgga aattatctag ggcaaaaatg ctggaaagtg tcccttcgat atctgttttc
    15841 acattttttc caatcgcatt ttggatatcg acttcatttt tataagcaga actgccttct
    15901 tctttggatg tgtctgcttc agagataaca ccatttttcg tatcgataat cgctacgtca
    15961 tcactagcaa catttggtac ggctgcgctg acggtgcgct gaatgccgag aacttgttcg
    16021 cttgttagtg tttgattgtt tttggttttg agtgttactg cggctgttcc tttttggctt
    16081 gcttcttcaa aaatcgaact tgattctggt aaagttagct gcacggaggc gctatcgatg
    16141 gttgttccat agctttgaac gatttctttt tctaaattga ctttcgtacc aactttttct
    16201 tgcatttttt tatcttcttc actggctcca agtgagctgt ttagtagaat gtcattgcca
    16261 tcttggcctg tgtatggaat acctaggtcc gcaaatttgt cacgaacgag tgtctccact
    16321 ttttcatcga ctaaaatgtt accgcttttg tcgacggtat aatcaacgcc cattttggct
    16381 aattgatcgg tgacttgttg ttggcttgtt tcggatagat ttttataaag agtaacttct
    16441 gttttgggcg tgttcatgta gagtaataac accgtgacta cgacaaaaag gccgactaaa
    16501 atcgcgcctt tgtgccaatt cttcaatttc gaatacattg tttttatttt tgccatctta
    16561 aaaacttcgc tccatttttc tcgtgtggac gattgactaa aactcccccg actagtctaa
    16621 ccgctacact tgcatattta aaagctgttt gtagctttcg attacattat cacgaatgac
    16681 cgcagcagtt ttcatttctg attctgcttt tttcatttga atgagtacat cactcgcatt
    16741 tccttcgcct gttgttaaaa ggttcgatac ggaagtttgc gcgtttgatt gtgtatcact
    16801 catactatcc agcatttgcg tgaaggtatt tccggcacct gtcgcattgt ctgttttcgc
    16861 ggtttcacca agcgttactt taggtaagac acttgctgca ttaatacttt caattgccat
    16921 ttcttaaaac actcctttat actttgccaa tttctaaatc tttttccatc attttttcat
    16981 ttgcttgtaa ggcggaagtg tttgccgcgt acattttttg tccgaccatt aaattggtca
    17041 tttctgctgt catatcaaca ttcgcgtaat tgacgtaacc cgcttcattt gcgttaggat
    17101 gagttggatc atagacacgt ttgacgcttc ctgtgtcgct cgatatttcg cttactttaa
    17161 caccttttgt tccagttaga gctgtttcaa atggtgtgat ttcggataat acgacgcgtt
    17221 ttctaaggaa aggtgtctcg ccaggtgcgg cgcttgaatc ggcgttcgcg atattattgg
    17281 agcttacttc catccattgt ttcgcagcat ttaacgcgga gccacttgtg tttattcctt
    17341 caaacatggt ttatcacctt actttccacg ggctgctgtg ttgatggatg aattatagtt
    17401 gagtgcactg atagcgagcg cgtacatttg gttatttttt gttaagctaa tcatttcaga
    17461 agtgacgttg acattgttgc cgtcttcgtt gatggagccg ctcttggtcg ttacttttgc
    17521 atttgtttcg tctatatcgg ttccagctaa atgttttgtg tttgttttcg ttaggttgcc
    17581 ggccgactcg gtgctattct gaccagatgc gcgcaaactt gagccaaatg attcctcaaa
    17641 actcgcttca cttgctttaa aattgggcgt attggcattg gcgatattat ttgaaactac
    17701 ttggttggct gtttgaagat aattcaagta gttgccaata tgcgtggtat aattttccac
    17761 ttgtcatttc cttctttctt ttagaaaaat ttcgcataat tcaagttagc agcattgcga
    17821 cttttatttt cagaaaaggc attttcagtg gattctaatt gtttttgggt gaaaagaata
    17881 cctttattta taacttccct tgtttctttt aaaatggctt cttttgtatc ttttggtaaa
    17941 tgttcggtgc tttttagtag ttcatttagt tttgcttggt attcttcgag ggtaacgttt
    18001 aattgccccg tcgagtgaaa cagtgctttt aactcaacca aatgtgtctt tgcttgattc
    18061 atgtttcatc actccctcgt agccttcttt aagctgcgtg ataacatgaa tgatagtatc
    18121 aatattaacg ggttgtttta gtagttgcat ttggcgaatt tgttcagaaa tccattcata
    18181 taaaccgaaa atgttatcgt aaagttcttg cccggcttct ggatttaatt gtaattttaa
    18241 ttcttcaaag attttttcca ttttatcaag aataagatcg gcttcggaaa aatgtagttg
    18301 ttcgagtgct ttgtccaatt ttttaaattc aataatacaa cgttcgtata tataaatggt
    18361 gtttttaatg ggattgctcg tatttaattc attttgcgtg tatcgtttcc aagcttgcat
    18421 ttttttcacc taccattttt atttattaga actgttcatg ccatcgatga gggcgtctag
    18481 cgtcatggcg tcgctttgca tagcttgcat catttcaagc catttgttgt attgatccgt
    18541 aatattcgtt aataacgtgt catttcggct agtaatatcg gttaacttga ggtttaattt
    18601 attgatttca ttcgtcatcg aggtcgtttc atcactgata aagcctgtcg agccaaatgt
    18661 tttgttcaaa gattgataca gttcatcgcc aattccgcca atgccaaaga aaaatctttc
    18721 gacggcggtt gggtcttcag ctaccatttt tttcattgca gtttcatcga cttttaaaac
    18781 gccttctttg tcgacactta ttccaaaatc gaataatgta ttcccatctt ttttatgttg
    18841 gaatacgttg tttagggcgc gatttgcttc gaggtcgaca gcagatgctt gtaaaatcgt
    18901 tccttttccc gtgtaggttt tcattgtgct tgttagtgca ttgtatgtat ttacaaaact
    18961 ggtgatcatg ctggctgctt tttcatcgct ttggtcttgg atggttaatt tttcagcgcc
    19021 agttgtttct tttttgaggt tgatggtcac gcctgggatg tagttggtta ccttgtttgt
    19081 tgcacttgta acggtcgctc cgttgattct gagtttggcg tcctctgcag ctaaatggtc
    19141 tggggaattt tgtactaatc caagtgcatc gagaacagcc gaatcgcctt caaatttaat
    19201 actgttttcg acaccggttg ttgaagaagt tacgaccatg ttttcgccta gcgtgtagat
    19261 attcacctta gctccggcgc tattgatgga gttcatcaca tttttcattg agctatctgc
    19321 atcaacttta atttctttgc cattgatttt gattgtcccg cttacaccga tttttgcctc
    19381 aatatcaggt actgctttat tgtaagtgtc tgcggtcgcc aagttttgga cttcgataga
    19441 ataactgccg ttgacggaac tgctcgttga tgaaacagta aaactcgttt cgttggatga
    19501 agtcgcgagt ttggttttac tttcataagt cgtgaaagag ctcatcgttt tcagcgactc
    19561 agataaagca tttttcaaac tagcataaag atcaatccgt gattggtagc tggaaatttg
    19621 gttttgataa ggcgttttcg ctttttccaa actagctttt tgaagactga taaattgcga
    19681 atagtattgc gttgggtcca ttaaactgct tgcaatcgaa cttcccactt ggtctcacct
    19741 cacatataat ttagaatgct taatttttgt accatcacac tggattgtag tgcggcttgg
    19801 tatgcaatcg atgttttatt tagattactt acagcttctg gcatattgac ttcttcgaca
    19861 ttggatttac gttcggaaaa gtcgacaatt ttgctagaaa gtacgttatc ataggctgtt
    19921 acgccgtttt tctgtccgcc gatatttgtc atggaattgg tgatgatttc aatattcttg
    19981 ctgtttgttt cttgcaaggc agacaaagca tccttatcgc cagttttcat tgcgtcaacg
    20041 attttttgaa tgttgttaaa cacatccgtc atcgcactac catcatggaa aacttctact
    20101 tctaatgtgt ccgttacgcg gaatttttta ttttctgttg ttccgttata gatgatttct
    20161 ccagtggttt tatctgttgt aaatggcttc acgctcgtgc tagaaccact aaaaacatat
    20221 ctgccatcgt cttctgagtt agcgacagaa ataagaacat ccagtaaacc tttgatttct
    20281 tcggctgatt gcgacatatt gtctttatcg ctcgtgccgt taatcgcttg caagactaaa
    20341 gcatttaccc ggttcatcga tgtagacatg gatgaaaggg atgtttcagc cgtatttaat
    20401 aatgattttg cttcggttac gtccgttttt tcgcgattta gctgactaag cacatgatta
    20461 taggataaaa tttgcgctgt tgcaccagga ttttcgctca tcgattcata ctttttccca
    20521 gaagatactt gtaattggta ttttgcaagg tttcctgaga cattattcag ctgattaatt
    20581 attgaatttg cttgttgatt cgttgaaatt cgcattattt tcctccttat aacatggcta
    20641 agagagcttt catcatatcg ttcactgtgt tcatggcttt cgtattggcc acataataac
    20701 tttggtattg catgatattt gtcatttcct cgtcaatatt aactccttca agagatgatt
    20761 ttgattcaga aagagaattt aaagcttgcg tgtctgccgt agaagttgcg ctacttttac
    20821 tagcgtccgt cgccacttcg gtaatgattc cgtccatgaa actcgggaaa gttgttcctt
    20881 gaatgttttt gtctgttttc aaggaagcga tatccgccgc gataactcct agaaacggct
    20941 tgttatcagc gttacttgtg attgcaggat tcaggatcca tttgccagag ctttgggtga
    21001 aaattggaat ggaaaaatca ttcacatcgg ttacatatgt actcgtgcca agcgtgtcaa
    21061 tcgcgtggtc aactccgcca atcgtcagcg tatcaccaga acgagtcaca ccagggaatt
    21121 tttctaattg acgcaaaagt tcatcgcgat tgctcagtag tttttcgtcg ttcggattcg
    21181 ctttgagcgc atcattgatt ttttgcaaat cgtccattgt tttattgacg tttttgactt
    21241 gaatatcatc taatgctttt gctaggctgt tcgaaaaagt ttcgattttt tcttggtacg
    21301 atttaatttc attttggtta acacgaacgg aagcgatgat ggaaccttct ggcatgttga
    21361 gtttttgacc gtctacggaa aattcaaagc cagtcgcggt tcgcgttgat gtgatttcgg
    21421 tcgtttcatc accttggaca acaagacgtc cgccaattgt cacatcgtac acatctggat
    21481 tattcggatg ggcgctcacg gaaatcccag catagccagc catcgtacta agtagttgat
    21541 cgcgttggtt cagcaaatcg ttcggtgggt tggagcctgc atttccgatt gctttattga
    21601 tactgcctaa ttttttaatt aatgaattta agtcttgaat cgcggcatct gtatctgctg
    21661 caatggttgt ttctaattct tttaagcccg aatgaagttg gtttaattga tccgtaaaaa
    21721 tcgacatact ggataaaagt gccgttgtat tcgttgcttg gtcaggattt ttcgctaatg
    21781 ctgcccaagc ggtgaagaaa ttatctaaat tatcacttgg tgtatttttc cctggagtac
    21841 caaataaatt aagtgcttga ccgagcgccc cactttgata taacgaagcg gattgtttgg
    21901 cgatttgatt attgtattgt gtcgtaagtg ctgtatttgt tagacgttta atgtctgtca
    21961 ctttgactcc gtagcctgtt tgtttcccac caagcagacc accgtcaccg taaaccgccg
    22021 tctgatccac agcttgtctt atgtatcctg gcgtattcat attactaata ttttgctgag
    22081 cgaccatatt agcgatttgc gccgctgaca tgcccgataa tgacgtatta aaatcactta
    22141 aacgcacaaa aaatccctcc gtttacttaa aaagtctcgt ttatcatcat attattttct
    22201 gcttgtgttt ccgcgtgatg tcccgtaata acatccacca tatgttccga aaaagccaat
    22261 tgcatttctg ttctaatttg gttttccgta acacttactc gtaaaaggtt ttctttttca
    22321 agtagcattt ttttccgttc atctataatg gcattttccg caggtgtcca agtattttgg
    22381 agcgttctaa gcgtattatc ttcgccaatg attgttttta aagcttgata ttcgttttgc
    22441 aaagcggcaa gttcgcgctg tagtcctagt tggcgttctt ctgcatcaat ccagttctct
    22501 tcttgcacta attttccgag taaaattgct gcatcggtcg ctttgacatt tttttcgatt
    22561 aaaatttcta attgattgat taattcgttt tgcattccca tcacctacaa tacgacatcg
    22621 agaatcatgc cagtaatctc accaatacgg tttagcatgt ctaaatgtcc agtttttgta
    22681 tcaattaaat tcattacatc atcgagttca ttggtttgtt tttctacttg ctttaaaatc
    22741 gtcatttttt gcgaaaaccc gtattttgga tgacggcttt cgatattgtc gtaatccatc
    22801 acattattca cataaaaatt caaaaatgtt tggactgctt ttttatagct caaaacatta
    22861 tctaccgtca tatccatttc aacgagtgac tttttatctg tgacattcgt gattagttcg
    22921 ttaatttcag tcagggaagg agtttgtttc ttgccatttg ccttcatttg ttcaaaataa
    22981 agctgttgtg tttgatttaa ttcttgcatt cccctaacta cattcgtctg tttggactgc
    23041 gaaatttggc caattgaaac attattcatc ctttttcccc cgaaaaactc attttcgctt
    23101 tctaaacctt atttttctat ttaat
//
LOCUS       DASDYO010000033        22964 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.033, whole genome shotgun sequence.
ACCESSION   DASDYO010000033 DASDYO010000000
VERSION     DASDYO010000033.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 22964)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22964)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22964
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.033"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            232..933
                     /locus_tag="U0290_001115"
     CDS             232..933
                     /locus_tag="U0290_001115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbonic anhydrase"
                     /protein_id="HEM2301160.1"
                     /translation="MTKEKVLWGYDEKTGPEMWGHICSDFEIAHTGKAQSPVDIEQAD
                     VVKLKPSTMKFYYKETDYTIRRIEQSVHVFPHDKEQGLRFNGEYYPLVSFHAHIPAEH
                     LLDGYVYPIEWHFVHEKPDGTTLVMSAWMEIDNTNNVEFKDLPTYFPEVFADFETERE
                     ITLDVNEFMPEERVFYTYQGSRTTPPTVEGVTWIVLKNAKTLGQEDFTEFEKAIGNTS
                     RPVQDLNGREITFYN"
     gene            1001..1543
                     /locus_tag="U0290_001116"
     CDS             1001..1543
                     /locus_tag="U0290_001116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012985137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEM2301161.1"
                     /translation="MYEKARQMMIEAHSGQVRKITGEPYFSHPLNVARILRRAGFREE
                     VVVAGLLHDAVEDTEMTDADIRATFGDEVADLVASHTENKTLSWEERKAHTIEQVRTG
                     SLEEKALIVADKLDNLTSVKYALSSEGKSVWSYFKRGYDLQKWYNQGIKNNMEYGLNP
                     SEIPPFFGEYARLVKWIFKK"
     gene            1679..2551
                     /locus_tag="U0290_001117"
     CDS             1679..2551
                     /locus_tag="U0290_001117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464340.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM2301162.1"
                     /translation="MVYGAIEAGGTKFVVAIGEKSGKIIKRESYPTTEPAETMKAVIQ
                     FFKQYEDELKAIGIGSFGPIDIRKSSATYGYITQTPKLAWRNYDIVGAMKKEFNVPIG
                     FTTDVNAAALGEVSLGAAAGLDSCIYLTIGTGIGGGAVVSGKILEGFSHPEMGHIMVR
                     RHKRDRFTGSCPSHSDCLEGLAAGGAIEKRWGQKAAELADNEEVWNLEAHYIAQALMN
                     YTLILSPERIVLGGGVMKQRQLFPLVRQKLKALVNNYVQLPDLDEYIVPPKLEDDAGI
                     TGCVLLAVDAEESN"
     gene            2636..3565
                     /locus_tag="U0290_001118"
     CDS             2636..3565
                     /locus_tag="U0290_001118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015454391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitronate monooxygenase"
                     /protein_id="HEM2301163.1"
                     /translation="MSITNLLNIKYPIIQGAMAQIAKAPLVAAVSNAGGLGIIASGGM
                     TADMLREEIKKTKALTDKPFGVNLMLMMTNIAELTEVIIEEKVGIVTTGAGTPKTFMP
                     IWKEAGIIVISVVPSVMIAKRMEKMGADAVIAEGTEAGGHVGETTTMALLPQIVDAVT
                     IPVIGAGGIADGRGIVAALALGAKGVQIGTRFLATDECPVHPDFKAAVIKASDRDTMV
                     TGRKAGAPVRSIKNKMIKEYIRLEEENADRDTLEELTLGSLRKAVQEGDTDNGSVMAG
                     QIAGLITEIKPCKDVIEEMMTDAKNVIAGLELN"
     gene            3793..4245
                     /locus_tag="U0290_001119"
     CDS             3793..4245
                     /locus_tag="U0290_001119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2301164.1"
                     /translation="MKDILRDIGVIARALDSISNIEFKELNLAKGQFIYLVRICENQG
                     IIQEKLVDILKIDRTTASRAIKNLEKNGLIIKKQDKNNKKNKLLFPTEKGQQLYPLII
                     RENEYSNAVALKGFTEAEINMLADALKKVKENIADDWLYVKKGNKRSY"
     gene            4261..4767
                     /locus_tag="U0290_001120"
     CDS             4261..4767
                     /locus_tag="U0290_001120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464343.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301165.1"
                     /translation="MIKLCTISDSQALLEISYKTFDETFRAQNKPENMDAYLKTNFTA
                     KKLSDELKNTHSYFYFVFHQEAIAGYLKLNIGDAQTEEIAGNTIEIERIYVLKSFQKK
                     GLGKELFNQAIEIAKEVDAERIWLGVWEKNKNAIQFYAKLGFIKNGQHDFFMGDDCQT
                     DIIMIKDL"
     gene            complement(4791..5204)
                     /locus_tag="U0290_001121"
     CDS             complement(4791..5204)
                     /locus_tag="U0290_001121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464344.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2301166.1"
                     /translation="MSFAVPYLVFNGEGQDALTFYADVFQAEITSVQRFKEMNNFDGN
                     AVFGERLMHSRLAKNGEEFIYITDAPYDGFTIGNRVTILINFETEEDIKYAYEVLSAT
                     GKVEMELQVAFWGSTYAQVTDQFGVFWQLNFDKKS"
     gene            5429..8059
                     /locus_tag="U0290_001122"
     CDS             5429..8059
                     /locus_tag="U0290_001122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation-translocating P-type ATPase"
                     /protein_id="HEM2301167.1"
                     /translation="MLWVKESIEQLLSKLHTNLDTGLTKEQVKQKHAEFGTNEFEEGK
                     KESLLQKIGHHLVEITTIVLLFAAAISAYLAITTGYGWAKVVVILGIVVLNMVLGIYQ
                     ENSAEKALAALQSMNAHLTTVVRDGVRMQVDATELVPGDIIEIVAGDMIPADARIISS
                     SSLQVEESALTGESVPVEKDANAVVSEKAPIGDRLNMLYSGCLVTNGRATAVVVEIGM
                     ETEMGKIAGLLNSTSKLMTPLQLRLKELAKRLSIVALLAGILIFIIDVYVYGETIIET
                     LMIAISLAVAAVPETLPVIVTLTLAYGVQNMVRKNTIIRRIPAVETIGNTSVICSDKT
                     GTLTQNKMIIQQIWAADHAPIKATAEFDTAEQKVLEMLSLSSNATIDVTDGEETIIGD
                     PTESSIIRLLEEKGTTKKALEAKYPRVFELPFDSDRKLMTTIHQVEDGFLSITKGAFD
                     RIPVNFSEAFLAEAERVHDSFAEDALRVLVVAYKKYPEMPTDLSSEALETDLTFAGMV
                     GMIDPPRPESKAAVLAAKKAGIKTVMITGDHIVTASAIAKEIGILTDGDKAITGAELA
                     EMSEADLEKNIRDYAVYARVSPEDKIRIVKAWQKNGEIVTMTGDGVNDAPALKAADVG
                     AAMGITGTDVSKNAADMVITDDNFATIVDAVKEGRTAYENIRKTIYFLLSTNFSQIFI
                     MLIAIILGWGAPVVAVQLLLINVVSDGIPGFFLSREKADDSIMERKPIPKNAGIFANG
                     LGKKMATQAVVFTIVTLAGFYIGQFVTINNSIGASYEVGMTMAFVILAWSSVAHIFNV
                     RSDKSIFTIGFLSNRGLFFSAICSMLIILGLAIIPPLANMFFLVEMSLTHWILAFILS
                     MFPLLFVEIQKLIQRKRAKA"
     gene            8074..8922
                     /locus_tag="U0290_001123"
     CDS             8074..8922
                     /locus_tag="U0290_001123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301168.1"
                     /translation="MNETEKLVAALLERNFGKNIGTRYPDNEAAQMRAEEVIGEIAIV
                     IAPLVEKLGIESKTVKKTIPFLYELQKNQFCDMSAYPYPLLLVNGTSADTEKYWRDLP
                     TYWTDDANKIVLPYVLEHIKNNKVRQKLLAFHAWLIGEVVEMNEELGADFRIKLVFES
                     DMRIRLRVYDVEQIAIEVHFLDNHDTEQQHLGYDVSLDVDITDKARLLLRQGILTENL
                     GLEALKAYMKSVLPIAHSLKNLEYLTVEDTKKLTKLLTQEEPKIMEDTDLTSKALDFL
                     QKAAQQ"
     gene            9032..9589
                     /locus_tag="U0290_001124"
     CDS             9032..9589
                     /locus_tag="U0290_001124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464347.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301169.1"
                     /translation="MIRHAKKSDAPKIAPLLLVIWKDMELPILEVETEEAITNALIEA
                     IQTEDYRYSYRHLHVYEKDGDIAGVLAGYPGKIEPEIDRAWNEIAKKHGIRYEEPIFA
                     DKETFPGEWYLDSIVTNEKYRGHGVGTALLAKLTEIAAEDGEKVVGLNCDKGNPHAKR
                     LYERLGFHVTGEIILSGHEYEHMQK"
     gene            9606..10268
                     /locus_tag="U0290_001125"
     CDS             9606..10268
                     /locus_tag="U0290_001125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464348.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3153 domain-containing protein"
                     /protein_id="HEM2301170.1"
                     /translation="MKKIIFAVVLSLVLILAGCADVTNTVKVDKKGEATISFDIDISS
                     VAGIFASSYSDEVEAKLKEAGFTVDKKSNTSYHIEKKLDKNETTKSDMKPEDFGVKIT
                     NSKSFFTQKIKVDADIDIEKIWKKEVADVPFPKEILSQVDYTFILDLPISSIGENNAK
                     SVDGGKLTWDVPLDKKSEMYFEVTVPNVKNIAIVGGILLVAIIGLLIYLIKRHRKKKK
                     QL"
     gene            complement(10284..10673)
                     /locus_tag="U0290_001126"
     CDS             complement(10284..10673)
                     /locus_tag="U0290_001126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464349.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2301171.1"
                     /translation="MQQTIKEASEHTGLSAHTIRYYEREGLIPFLARDKNNNRIFDND
                     ALHWLELLTCLRVTGMPLAKQKEIVELTKGGDGTVSERIAVLKEHQQDMYRRQAELDR
                     AFKKIEKKLACYEELEQAVNKSVDQFS"
     gene            10794..11618
                     /locus_tag="U0290_001127"
     CDS             10794..11618
                     /locus_tag="U0290_001127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464350.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2301172.1"
                     /translation="MNLKDTVKLANGVEMPRLGFGVWKVQDGDEAVNSVKWAIEAGYI
                     SIDTAAAYKNEEGVGQAIKESGVKREDLFVTTKLWNAEQGYESTLAAFDESLRKLELD
                     YVDLYLIHWPVKGKFKDTWRAFEKLYKDKRVRAIGVCNFHEHHLKELMEDAEIAPMVN
                     QIELHPQLTQEPLRKFCAENNIVVEAWSPLGNGKLLSNPEIKAIADAHGKSVAQVILR
                     WDLQIGVVTIPKSVHQERIIQNADIFDFELSEEEVAKISGLNKDERTGPDPDNFNF"
     gene            11697..12665
                     /locus_tag="U0290_001128"
     CDS             11697..12665
                     /locus_tag="U0290_001128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AlkZ family DNA glycosylase"
                     /protein_id="HEM2301173.1"
                     /translation="MDAKTIIENRFQSQKLIQTAWSDSPERIVFHFGAMQSQNYGQSL
                     WAVGSRMTTPSEKAVEQAINNGEIIRTWLLRGTIHLFSAKDYHWMMDLIAPSIDKICK
                     PYRAKLGLTDEVLHKATEVVSEIVSEQAVTRKDLAAHLATKDLPSAGIPFAQLLVYLS
                     SRKVICSGPNETFRNTMHIPADTNHFTREEAIKELAKRYIQSHAPATLKDFCFWSGLT
                     VTDAKIGIADMPKMGDYYITTLVENGTMPTTIPLAGFDEWIIGYRDRSVVLPEIWHDE
                     IMTKNGIFRPAIITEGKVVGKWEKPKKRAELDGDFWDRYIQFRNML"
     gene            12706..13986
                     /locus_tag="U0290_001129"
     CDS             12706..13986
                     /locus_tag="U0290_001129"
                     /EC_number="1.1.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA reductase,
                     degradative"
                     /protein_id="HEM2301174.1"
                     /translation="MNAFDKFYKKTVEERRAILAEYADLNEEEQAFLASTGALSFDKA
                     NHMIENTIGIYSLPLGLGMNMLLNDKHYVVPMVMEEPSVVAAQSAGAKLIGQNGGITG
                     SATKRKMIGQIELISVSDIQAAKENIIANEEQLIAIANQAHPSLQKRGGGAVEIQVRT
                     AQTANDETLLIVHLLVDTQEAMGANMVNTMVETLAPELEMLTNGTANMRILSNLVDEA
                     TATAVCRINPESLATKTQSGEWVRDRIIAAYEFADADIYRAATHNKGIMNGIDAVIMA
                     FGNDWRAVEAASHAYAARTGSYKPMSKWSKDAEGYLVGELTLPMPVAFVGGSIGIHPI
                     ATLSKKIARVESAKELAMLVCAVGLTQNLAALKALVTEGIQRGHMSLQAKSLAMTAGA
                     EADEIEKVATFLQESKQLNVVAAKEFINKLRSGK"
     gene            14185..15819
                     /locus_tag="U0290_001130"
     CDS             14185..15819
                     /locus_tag="U0290_001130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na/Pi cotransporter family protein"
                     /protein_id="HEM2301175.1"
                     /translation="MGDINIQQMIFQFIGGLGIFLFGIKYMGDGLQMAAGDRLRDILD
                     KYTTNPFMGVLAGILVTVLIQSSSGTTVLTVGLVSAGFMTLKQAIGVIMGANIGTTVT
                     AFIIGIKLSEYALPIIAAGAVLLFFFKNHKVKNIGQVFFGFGALFYGLDLMGQGMKPL
                     AGMESFHELTAQMSTNPFLGLLIGTIFTAVVQSSSATIGILQELYGQGAIDLQAALPV
                     LFGDNIGTTITAVLAAIGASVAAKRAAATHVIFNLIGAIIFMLILPLFTSLVTYLQGL
                     FGLNPEMTIAVAHGTFNITNTFIQFWFIGAFAWLVTKLIPGDDSRIDYKTKHLDTNLI
                     DQSPGIALEMAREETLRMADYAKFGLQEARQYLVNRESKHAESTIQVEEAVNNLDRKI
                     TEYLTKISSVALTNNETEEHALMLDTVRDIERVGDHMENIVENIDQLIKNKAKMSEEA
                     SDQLIEMFELTTANFERAVKSMHKKDRALAEETILVEKDIDKAERRLRKNHIRRLNEG
                     KCQVVSGILYIDIVSDLERIGDHANNIAESVLELNE"
     gene            15973..19620
                     /gene="nifJ"
                     /locus_tag="U0290_001131"
     CDS             15973..19620
                     /gene="nifJ"
                     /locus_tag="U0290_001131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate:ferredoxin (flavodoxin) oxidoreductase"
                     /protein_id="HEM2301176.1"
                     /translation="MRNRKTMDGNTAAAYISYAFTEVAAIYPITPSSTMAELVDEWSS
                     KNKKNLFNEPVKVVEMQSEAGAAGTVHGSLQAGALTSTYTASQGLLLMIPNMYKIAGE
                     LLPTVFHVSARTISAASLNIFGDHSDVMAARQTGFAMLAEGSVQEVMDLSAVAHLASL
                     KGSLPFLNFFDGFRTSHELQKVEVLEYDELENLLDKEALQQFRNRAMTPNNPKTLGSN
                     QNPDIFFQQRETVNRYYEEIPNMVQNYMKEINQLRGTDYDLVNYYGAEDATDVIVAMG
                     SVTPVIEQVIDYLTTEGKKVGLLNIRLYRPFPAENFLAKLPKTVERVAVLDRTKEPGS
                     GGEPLLLDVQSVLYDSETRPLVIGGRYGLGSKDVTPDQILGVYSHLTTEKPKPRFTIG
                     ITDDITNLSIENAGPSDLTSEKTFQCKFWGFGSDGTVGANKAAIKIIGDNTDLYAQGY
                     FSYDSKKSGGLTVSHLRFGEKRIRSAYLIQQADFVSCSTSAYLRSYDLLKGLKPGGTF
                     LLNTIWEGEQLERHLPAAMREYIAKNNIQFYTLNAMRIAGEAGLGRRINTVMQTAFFR
                     VTDILPFEKALADLKESAIATYGKKDMAVAEKNILAMDQTVANLHKVEVPASWANPVV
                     TAETNATTEKPAYVQNILEPVNRLEGDNLTVGDLISNGMVSGAYPPGTAAYEKRGIAL
                     EVPEWISENCTMCNECAFVCPHAAIRPILTDEEEMESAPEGFMTREMRGKDGLRYRIQ
                     VSPMDCTGCNLCAETCPAKDKALVMKPFEEVTAKENPNWSFAINVKPKKNPGKKNTVP
                     GSQFEQPLLEFSGACAGCGETPYVKLLTQMFGDRMMIANATGCSSIWGASAPATPYTV
                     NDKGHGPAWGNSLLEDNAEYGYGMYLANQTMRKALNNKVTKALREEAMSETLREALID
                     WQTQMDVSEDTRERAEALQLALLSEMEGNEALESIYNDRELFIKRSQWMLGGDGWAYD
                     IGFGGIDHVLASGEDVNIFVMDNEVYSNTGGQSSKATPTAAIAKFASGGKSVGKKDLG
                     IMAMSYGNIYVAQIAMGANKRQTLKAIEEAEAYPGPSLIIAYTPCINHGISSGMKTML
                     SETQKAVECGYWSLYRYNPALEEKGKNPMTMDYKKVDFDQFEDFLKRETRYSALYKAN
                     PDVATKLSEKTRLDAEKRFKRYATMAGLDLEKIWKKKEATEDVKAPVDDERAARKAAR
                     EARRLAREQGK"
     gene            complement(19870..21831)
                     /locus_tag="U0290_001132"
     CDS             complement(19870..21831)
                     /locus_tag="U0290_001132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-1,6-bisphosphatase"
                     /protein_id="HEM2301177.1"
                     /translation="MKTIDMKYLRLLAKEYPTIAKTATEIINLEAIMNLPKGTEHFLS
                     DVHGEYSAFEQVLRNGSGVVKRKIRDIFGAELDDAEINSLSTLIYYPEEKMDLLASET
                     EDLQAWYRTTLFRLIELCQYVASKYTRSKVRKAMPEDFAYILEELLHENYNEDDKKLY
                     YEEILQHIISLGRAEEFISALSLLIQQLVVDHLHIVGDVYDRGPYPDKIMDTLMNYHS
                     LDFQWGNHDILWMGAASGSRVCAANVIRISARYLNLDILEDSYGISLRPLALFADEVY
                     KDDPCTYFQPKNEENINYSNAEITQIARMHKAISIIQFKLEGEIINRRKEFDMDHRLL
                     LQFIDYKKGTIHLKGKEYLLLDSHFPTINPEKPYELTDAERELIGKITAAFKNCRRLQ
                     KHVQFLYSKGSMFLTYNGNLLYHGCIPLHEDGTFMEMKLRGEKYAGRSLLEQFEILTR
                     EAYVRPTGTKEKKYACDIVWYLWTGAISSLFGKSEMTTFERYFVAEKETHTEEKNPYY
                     KLRNNELICKQILEEFGLDGECGHIINGHTPVKEGKGESPIKANGKMLVIDGGFAKAY
                     HKETNLAGYTLLFNSYGLQLVSHQPFTTKEDAIKNETDILSTRQVIEMEINRKRVRDT
                     DIGAKLSEQAEDLKLLLDAYRNGLLHENR"
     gene            complement(21946..22857)
                     /locus_tag="U0290_001133"
     CDS             complement(21946..22857)
                     /locus_tag="U0290_001133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AEC family transporter"
                     /protein_id="HEM2301178.1"
                     /translation="MEFLLILLPVFGIFAIGFIGQKTLKFDIPNLSKLTLYLMSPFLA
                     FNTFYTNALTIDYAYLAIYIFALCLSLILLVSLISFLLGYNLQDRCALILASAFMNNG
                     NYGTPVVLLVFGAVGLDIAVVLMVLQQLAMSTIGIYFAAKGSKDANGMKTVMKRVVRM
                     PIAYGALLGLTLQLLHVSLPSALMTCVKLVGDAAIPTIMIVLGMQLAVISFRRIELTK
                     VGIALVLKLLIAPIIAFGLTLILPVDEMTKQIMILLAAMPTAANTTLMAVQFDTKPDL
                     VSSATFISTVLSIITLPIVLYFLHPVF"
BASE COUNT         7676 a         4060 c         4866 g         6362 t
ORIGIN      
        1 tttcgaactt taagcctatg ttggaaaatt tgaattttat tattgagaat tataagaatg
       61 aaaagtaaag acgtttttat ataaaagatg taccggaaat aaagccacca gtatcttcac
      121 gtgagttcac accaaagtca aaacacgaac attaagcata taacttgtgg aatagatcag
      181 ctatccgcta aaataatgtt acgcaatttt tttcgaaaag gagaaatggt tatgactaag
      241 gagaaagtgt tatggggtta cgatgaaaag actgggccag aaatgtgggg gcatatctgc
      301 tctgactttg aaatcgcaca tactggaaag gcacaatcgc cagtagatat tgaacaagct
      361 gacgttgtga aattaaaacc atcaacaatg aaattttact ataaagaaac agactatacg
      421 attagaagaa ttgaacaatc ggtgcatgtt tttccgcatg acaaagaaca agggttacgc
      481 tttaacggcg agtattatcc gcttgtatcg ttccatgcac atattccggc ggagcatttg
      541 cttgacggtt atgtatatcc gattgaatgg cattttgttc atgaaaaacc agacggcaca
      601 acgcttgtaa tgagtgcttg gatggaaatt gataatacaa ataatgtcga attcaaagat
      661 ttaccaacct atttcccaga agtgttcgct gattttgaaa cagaacggga aattacttta
      721 gacgtgaatg aatttatgcc agaagaacgt gttttctata cgtaccaagg ttcacggaca
      781 acaccaccaa ccgtggaagg cgtaacttgg atcgtgttaa aaaatgcgaa gacacttggc
      841 caagaagatt tcactgaatt tgaaaaagca attggtaata caagtcgacc agtgcaagat
      901 ttaaatggtc gtgaaattac tttttacaat taaaaaacta gaaagcctcg ctcgaatctt
      961 gtatagtata gacatagatt ctgagtggag gcttcttttt atgtatgaaa aagcgagaca
     1021 gatgatgatt gaagcgcata gtggccaagt tcgcaaaatt actggcgagc cttatttttc
     1081 gcaccctttg aacgtagcga gaattttgcg ccgcgctggt tttcgcgaag aagttgttgt
     1141 cgcgggatta ctgcacgatg ccgttgagga tacggaaatg accgatgccg atattcgcgc
     1201 aacatttggt gatgaagtag ctgatttagt agcgtctcat acagaaaata aaacgttatc
     1261 ttgggaagaa cgaaaagccc atacgattga acaagtccgc actggcagcc tagaagaaaa
     1321 agcattaatc gtggcggata agctagacaa tttaacctcc gtcaaatatg ccttaagctc
     1381 agaaggaaag tctgtctgga gctattttaa acgcggctat gatctgcaaa aatggtacaa
     1441 ccaagggatt aaaaataata tggaatacgg attaaatcca tctgaaatcc ctccattttt
     1501 tggtgaatat gcgcgacttg tgaagtggat ttttaagaag taaattttgt atttaaatat
     1561 ctgttaaatt aggtatttag aattaaaatt ataagttttt agaaaataag tttctttttc
     1621 cagaaatcta ttgtaaaatg aaagcgttat aaaacttacg agaagggaag ttttttgaat
     1681 ggtttatgga gcaattgaag caggcggaac taagtttgtt gtagcaatcg gagaaaagtc
     1741 agggaaaatt attaagcgcg agagctaccc gacaacggag ccagcagaaa caatgaaagc
     1801 agtcattcaa ttttttaaac agtatgagga tgaattaaaa gcaattggga ttggctcatt
     1861 tggaccgatt gatattcgga aatcaagtgc tacatacggt tatatcacgc aaacaccaaa
     1921 acttgcatgg cgcaattatg atatcgttgg tgcaatgaaa aaagaattta atgtacctat
     1981 tggttttacg acggatgtta atgcagccgc tttaggagag gtaagtttag gcgcggcagc
     2041 aggtttggat agttgtattt atttaacgat cggaacagga atcggtggtg gagcagttgt
     2101 ttcaggcaaa attcttgaag gcttctccca cccagaaatg ggacatatta tggtgcgccg
     2161 acataagcgc gatcgtttta caggcagctg cccgagtcat agcgactgtt tagaggggct
     2221 tgcagcaggt ggagcaattg aaaaacgttg gggtcaaaaa gcagcagaac ttgcggataa
     2281 tgaagaagtg tggaatttag aagcgcatta tatcgctcaa gctttaatga attatacact
     2341 tatcttatcc ccagaaagaa tcgtgttagg tggaggcgtc atgaaacaac gccaactttt
     2401 cccacttgtt cgtcaaaaat tgaaggcact cgttaataat tatgtgcaat tgccggattt
     2461 agatgaatat atcgttcctc caaagttaga agatgacgct ggaattacag gctgtgtctt
     2521 gctcgctgtg gatgctgaag agtccaatta atggcgaaaa acagctctag tttatagggc
     2581 tgttttttga tatactaaat tgtgataaaa caaacaagaa cgcaggagga aaaagatgtc
     2641 cattacgaac ttattaaata ttaaatatcc aattatccaa ggtgcgatgg ctcaaattgc
     2701 caaagctcca cttgtagccg ctgtatctaa tgcaggcggt ttaggaatta tcgcttctgg
     2761 cggaatgact gccgacatgc tacgcgaaga aatcaaaaaa acaaaagcac tgacagataa
     2821 accatttggc gtcaacttaa tgctaatgat gaccaatatt gccgaattaa ccgaagtaat
     2881 tattgaagaa aaagtgggaa tcgttacaac tggagcggga acgccaaaaa cgttcatgcc
     2941 aatttggaaa gaagctggaa ttattgtgat ttccgttgtc ccatccgtga tgattgctaa
     3001 acgtatggaa aaaatgggcg cagatgcagt tatcgcagaa ggaacagaag caggcggaca
     3061 cgtcggcgaa acaacaacaa tggcactttt acctcaaatc gtggatgccg ttactatccc
     3121 agtcattggc gcaggtggaa ttgcagatgg tcgcggaatc gtcgcagcgc ttgctctagg
     3181 tgcaaaaggt gtccaaatcg gaacacgctt cctagcaacc gacgaatgcc cagtacaccc
     3241 ggactttaaa gcagccgtga ttaaagcttc cgaccgcgac acaatggtta ccggaagaaa
     3301 agccggtgcc cctgttcgct cgattaaaaa caaaatgatt aaagaataca tccgtttaga
     3361 agaagaaaac gccgatcgcg acacgttaga agagctaact ttaggttctt tacgaaaagc
     3421 agtacaagaa ggcgacacag acaacggctc tgtcatggcc ggtcaaatcg ctggcttaat
     3481 tacagaaatc aaaccttgta aagatgttat tgaagagatg atgacagatg ctaagaatgt
     3541 gattgcaggg ttagagttaa attaatgttt taaactgctt tcttttgaag cgtttgagta
     3601 aaatagcttt gataaattcc ttaatatatt atttggattt ttagtaagtt ataaaaagcc
     3661 gtgccagttc acttagtgct gatacggctt ttttagttag tagaaaaatt catttctgtt
     3721 tcatcaatac atcctctatg ttatactaat gcaaagttat attattgcaa atgcaacaaa
     3781 aggaggttgg cgatgaaaga tatattaaga gatataggtg taattgcacg tgcacttgat
     3841 tcaataagta atatcgaatt taaagaatta aatctagcaa aagggcaatt tatctatcta
     3901 gttagaattt gcgagaacca agggattatt caagaaaaac tagtagatat tttaaaaatc
     3961 gatcgaacca ctgcttcgag agctattaag aatttagaga aaaacggttt gattataaag
     4021 aaacaggata agaataataa aaaaaataaa ctattattcc caacagagaa aggacagcaa
     4081 ctatatccct taattatccg cgagaatgaa tactccaatg cagtagcttt aaaaggattt
     4141 actgaggctg aaattaatat gctcgccgat gcgctcaaga aggtcaaaga aaatattgca
     4201 gatgactggt tatatgttaa aaaaggcaat aaaagaagtt attaatttgg aggaaaagta
     4261 atgataaaat tatgtacaat aagtgattcc caagcactct tagaaataag ttataagaca
     4321 tttgatgaaa cattcagagc gcaaaataaa ccagaaaaca tggatgcata tttaaaaaca
     4381 aattttacgg ctaaaaaatt aagcgatgaa ctaaaaaaca cacattccta tttttatttt
     4441 gtttttcacc aagaagctat tgctggttat ttaaaactaa atataggaga tgctcaaaca
     4501 gaagaaatag ctgggaatac aatcgaaata gagcgtattt atgtattgaa gtcattccaa
     4561 aaaaagggat taggtaaaga gttatttaat caagcaatag agatagcgaa agaagttgat
     4621 gcagaaagaa tatggttagg tgtttgggaa aagaataaga acgctattca attttatgca
     4681 aagctgggtt ttattaaaaa tggacaacat gattttttca tgggcgatga ttgtcaaact
     4741 gatattatta tgataaaaga tttataaaaa aagttgagcg catactaagc tcaacttttt
     4801 ttatcaaaat taagctgcca aaacacccca aactggtccg tcacctgcgc ataggtcgaa
     4861 ccccagaacg ccacttgcaa ctccatttcc actttgcccg tagcactcaa aacttcatag
     4921 gcgtacttaa tatcctcctc tgtttcaaag ttaatcaaga ttgtcacccg attgccaatt
     4981 gtaaaaccat cataaggcgc atcggtaata taaataaatt cttccccatt ttttgctaaa
     5041 cgactatgca tcaatcgctc accaaaaacg gcattgccat caaaattgtt catctcttta
     5101 aaacgctgaa cgcttgtaat ctcagcctga aacacatccg cataaaatgt tagcgcatct
     5161 tgaccttctc cgttaaaaac taagtatgga actgcaaaag acatctcatc atctcctata
     5221 caattaatag ctttagtata agcctaatct actgcgaagt catgtctcaa aataataagg
     5281 atttgtgaat aaaaacaaaa tacttgcaaa taaacgtgat atattataca attacactaa
     5341 gaaatcggat atatttaaat taatattttt ttgcaataaa ataaagtaag tacttgcttt
     5401 tgggagtagg tgcgtaggag gtagatgtat gctttgggta aaagagtcaa ttgagcaact
     5461 tctcagcaaa ctacacacga atttagacac agggttaacg aaagaacaag tgaaacaaaa
     5521 acatgcagag ttcggaacga atgaatttga agaggggaag aaagaatcac ttcttcaaaa
     5581 aattggtcac catttagttg aaattacgac gattgtgttg ctttttgcag cggcgatttc
     5641 cgcttattta gcgattacga ctggttatgg ttgggcgaaa gtggttgtta ttttaggaat
     5701 tgtcgtgttg aatatggtgc tcggcattta ccaggaaaac agcgccgaga aagcacttgc
     5761 ggcacttcaa agtatgaatg cgcatttaac tacggtcgtt cgtgatggtg tgcggatgca
     5821 agtggacgca acggaattag taccagggga tattattgaa attgttgcag gagatatgat
     5881 tccagcagat gcacggatta tttctagtag cagtttgcaa gtcgaggaat ctgcgttaac
     5941 tggtgagagt gttccagttg aaaaagacgc aaatgcggtt gtttcggaaa aagcgccaat
     6001 tggcgaccgt ctgaatatgc tttactcagg ctgccttgta acgaatgggc gcgccacggc
     6061 ggttgtcgta gaaattggga tggaaacaga gatggggaaa attgctggac ttttaaacag
     6121 cacctcaaaa ctgatgacgc ctttacaact tcgcttaaaa gaattagcaa aacgacttag
     6181 tattgtagca cttttagcag gtattttaat ttttatcatt gatgtatatg tttacggtga
     6241 aacgattatt gaaacgttga tgatcgcgat ttctctagct gtagcagcag ttcctgagac
     6301 attgccagtt attgtgacat tgacacttgc ttacggcgtt caaaatatgg tgcggaaaaa
     6361 tacgattatc cgccgaattc ctgcagtaga aacaatcgga aatacgtctg ttatttgttc
     6421 tgataaaaca ggaacattaa cgcaaaataa aatgattatc caacaaattt gggcagcaga
     6481 ccacgcaccg ataaaagcaa cagctgaatt tgatactgca gaacaaaaag tattagaaat
     6541 gttgagcctt tccagtaacg cgacgattga tgtaacagac ggcgaagaaa ccatcattgg
     6601 tgacccaacc gaaagctcga ttatccgttt actagaagaa aaaggaacaa cgaaaaaagc
     6661 attggaagcc aaatatccac gcgtgttcga acttcctttt gactcagata gaaagctaat
     6721 gacgacaatt caccaagtag aagacggatt tctttccatt acaaaaggtg cttttgaccg
     6781 aattcccgta aacttttccg aggcgttttt agcggaagcg gagcgggtgc atgacagttt
     6841 tgcggaggat gcacttcggg tgttagttgt tgcctataaa aaatatccgg aaatgccgac
     6901 agacttgtct agtgaggcgc ttgagacaga cttaacgttc gcgggaatgg tcgggatgat
     6961 tgacccaccg agaccggaaa gtaaagcggc tgtgttagcg gcgaaaaaag cgggtattaa
     7021 gactgtaatg attactggtg accatattgt aacggcatca gcaattgcaa aagaaattgg
     7081 tattctaacg gatggggaca aagcgattac tggagcagag cttgctgaaa tgtcagaagc
     7141 tgatttggag aaaaacattc gagattatgc ggtatatgcg cgtgttagtc cagaagataa
     7201 aattcgaatc gttaaagctt ggcagaaaaa tggtgaaatt gtcacgatga caggtgatgg
     7261 tgtaaatgat gcaccggctc taaaagcagc ggatgttggt gctgcaatgg gaattaccgg
     7321 aacagatgta tctaaaaacg ctgcagatat ggttataaca gacgataatt ttgcaacgat
     7381 tgtagatgca gtcaaagaag ggcgtacagc ctatgagaat atccgcaaaa cgatttactt
     7441 tttactaagt acaaactttt ctcaaatttt cattatgtta attgcgatta ttcttggctg
     7501 gggcgcgccg gttgtagctg ttcagttgct attaatcaac gttgtgtctg atgggattcc
     7561 aggcttcttc ttaagtcgtg aaaaggcaga tgactcgatt atggagcgta agccaattcc
     7621 aaaaaatgca gggatctttg cgaatggact tggcaagaaa atggcgacac aagcggttgt
     7681 ctttacgatt gtgacacttg caggatttta tatcgggcag tttgtaacga ttaataattc
     7741 gattggtgca agctatgaag ttggaatgac aatggcattc gttattctag catggtcatc
     7801 tgtcgcgcat attttcaatg taagaagtga taaatcgatt ttcactatcg gatttttatc
     7861 taaccgtggt ttgttcttta gcgcgatttg ttcgatgttg attattttag gacttgcgat
     7921 tattccacca cttgcgaaca tgttcttctt agtagaaatg agcttaacgc actggattct
     7981 cgcattcatc ctctcgatgt tcccactcct attcgtagaa attcaaaagc ttattcagcg
     8041 aaaaagagca aaagcttgaa ggagggcaac tatatgaacg aaacagaaaa attggtagcc
     8101 gcattattag agcgtaactt tggtaaaaac attggtacac gctatccaga caatgaagcg
     8161 gcgcaaatgc gggccgagga agtaatcgga gaaattgcta ttgttatcgc accacttgtt
     8221 gaaaaacttg gaatcgaaag taaaacggtg aaaaaaacga ttccattttt atatgaactt
     8281 caaaaaaatc aattttgtga tatgagtgcc tatccgtatc cgcttcttct agtcaatgga
     8341 acgagtgcgg atacagaaaa atattggcga gatctaccaa cttactggac agatgatgca
     8401 aataaaattg tgctaccata tgttttggaa cacattaaaa ataataaagt acgtcaaaaa
     8461 ctactagctt ttcatgcttg gcttataggg gaagtagtag aaatgaacga ggagctaggg
     8521 gcagattttc gtataaaact agtctttgag tcagatatgc gcattcgttt acgggtgtat
     8581 gacgtagaac agattgccat tgaagtacat tttttagaca atcatgatac cgaacaacaa
     8641 catttaggct atgatgtgag tttagatgta gatattactg ataaagcaag gctcttatta
     8701 cgtcaaggta ttttgacaga aaatctaggc ttggaagcac taaaagctta catgaaatca
     8761 gttttaccaa tagcacacag cttgaaaaac ttggaatatt taacggttga agatacgaaa
     8821 aaactaacca aattattaac gcaagaagaa cctaaaatta tggaagatac agatttaaca
     8881 agtaaagcat tagacttctt acaaaaagct gcacagcaat aagaataaaa tgctatttgg
     8941 aggaaagtga tcctaatagc attttatttt tgcaagtggg gcggaaagaa tagtaaaatg
     9001 agacaatgaa attagaaatg aggatgtaaa attgattcga catgcgaaaa aatcagatgc
     9061 accaaaaata gcaccacttt tactagtaat atggaaagat atggaattac ctattttaga
     9121 agtagagacg gaagaagcga ttacaaatgc gctaattgaa gcgattcaga cagaagatta
     9181 tcgttatagt tatagacatc tgcatgtcta tgagaaggac ggggatattg cgggagtttt
     9241 ggcaggctat cctgggaaaa tcgaacctga aatcgaccgc gcttggaacg agattgcaaa
     9301 gaaacacggc attagatacg aagaaccaat atttgccgat aaagaaacat ttcctggtga
     9361 atggtactta gattcgatcg ttacaaacga aaaatatcgc ggtcatggtg ttggaacagc
     9421 acttcttgca aaattaacag aaattgctgc agaagatggt gaaaaagtag taggactaaa
     9481 ttgtgacaaa ggaaatccgc atgccaagag gctttatgaa cgtctaggat ttcatgtgac
     9541 tggagaaatc atacttagcg gtcatgaata tgaacatatg caaaaataag aaatgaggcc
     9601 aaccaatgaa aaaaattatt ttcgcagtgg tactaagttt agttctaatt cttgctggat
     9661 gtgccgatgt aaccaataca gtaaaagtgg ataaaaaagg ggaagcgacc atttcctttg
     9721 atatcgatat ttcttctgta gcagggattt ttgcctcaag ttactcggat gaagtagaag
     9781 ctaaactgaa agaagctgga tttacagtag ataaaaaatc aaatacaagc tatcatatcg
     9841 aaaagaaact agataaaaat gaaacaacga aaagcgatat gaaaccggaa gattttgggg
     9901 taaaaattac caatagcaaa agtttcttca cacaaaaaat caaagtagat gccgatattg
     9961 acatcgaaaa gatatggaaa aaagaagtgg cggatgttcc gtttccaaaa gaaattttaa
    10021 gccaagttga ttatacattt attttggatt taccgatttc gtcaattgga gagaacaatg
    10081 ctaaaagtgt ggatggcggg aagctcactt gggatgtgcc gctcgacaaa aaatccgaaa
    10141 tgtattttga agtcactgta ccaaacgtaa aaaacattgc gattgttggt gggattctac
    10201 ttgtcgcaat cattggtcta cttatttatc ttattaaaag acatcggaaa aagaaaaaac
    10261 aactataaaa aagtgtggat cagttagcta aactggtcca cacttttatt tactgcttgt
    10321 tctaactctt cgtaacaagc taattttttc tcgatttttt taaatgctcg gtctagctct
    10381 gcttgccggc ggtacatatc ttgttgatgt tctttcagta cagcgatgcg ttcggagaca
    10441 gtaccgtcac cgcctttagt tagttcaaca atttcttttt gtttcgcaag gggcattccg
    10501 gtgacgcgta aacaggtgag taattcaagc cagtgaaggg catcattatc aaaaattcgg
    10561 ttattatttt tatcgcgtgc tagaaaaggg attaatcctt ctcgttcata atagcgaatc
    10621 gtatgggcgc ttaaacccgt gtgttcagaa gcttctttga ttgtttgttg cactaaaacc
    10681 acctcttttt ttcttaataa tagcaccttg aaaatcgaaa agccaaatgt ttgcctttga
    10741 gtatactcta aggtgtatag taaacgtgtt attactttta ggaggcggat aaattgaact
    10801 taaaagatac agtaaaacta gcaaatggtg tagaaatgcc ccgtttagga tttggcgtat
    10861 ggaaagtgca ggacggcgat gaagcagtaa attctgttaa atgggcgatt gaagctggtt
    10921 acattagtat tgatacagct gctgcttaca aaaatgaaga aggcgttggt caagcgatta
    10981 aagagtctgg cgttaagaga gaagacttat tcgtaacaac gaaactttgg aatgcggagc
    11041 aaggttatga atccactttg gctgcatttg atgaaagctt acgtaaatta gaacttgatt
    11101 atgtagactt atatttaatt cactggccag tcaaaggtaa attcaaagac acttggcgcg
    11161 cttttgaaaa attatataaa gataaacgcg ttcgcgcaat cggcgtatgt aacttccacg
    11221 aacatcacct aaaagaatta atggaagacg cggaaattgc gccaatggta aaccaaattg
    11281 aattacaccc acaactaaca caagaaccat tacgtaaatt ctgtgctgaa aacaacattg
    11341 tagtagaagc ttggtctcca ctaggtaatg ggaaattact ttctaaccca gaaatcaaag
    11401 cgattgccga tgcacatggt aaatcagttg cacaagttat cttacgttgg gatttacaaa
    11461 tcggtgtcgt gactattcca aaatccgttc accaagaacg tattatccaa aatgctgata
    11521 ttttcgactt cgaattaagc gaagaagaag tagcaaaaat cagcggttta aataaagacg
    11581 aaagaactgg cccagatcca gacaacttta atttctaata gtgaaaaaat cccttccagc
    11641 ttatcgaact ggaggggatt tttatgctac aataaactaa aaaaagaggt taacagatgg
    11701 acgcaaaaac aataatagaa aaccgctttc aaagtcagaa attaatacaa actgcgtgga
    11761 gtgactctcc ggaaagaatt gtttttcatt ttggagcaat gcaatcgcaa aactatggtc
    11821 agtcgctctg ggctgttggg agtagaatga cgacgccaag tgaaaaggct gtagagcaag
    11881 cgattaataa tggtgaaatt atccggacat ggcttttgcg cggaacaatt cacttgtttt
    11941 cagccaaaga ttatcactgg atgatggatt taattgcgcc ttccatagat aaaatatgta
    12001 agccataccg agcgaaatta ggcttaacag atgaggttct tcataaggct acagaagtcg
    12061 tttcggaaat tgtttcagaa caagccgtta cgagaaaaga cttggcggct catttagcga
    12121 ccaaagattt accgagtgca gggattcctt ttgctcagct gttagtttat ttaagctcgc
    12181 ggaaagtcat ttgttcaggc ccgaatgaaa cttttagaaa tacgatgcat attccggctg
    12241 atacgaatca tttcactcga gaagaagcaa taaaagaatt agccaaacga tacatccaaa
    12301 gccatgcacc agctactttg aaagattttt gtttttggtc gggattaact gtgaccgatg
    12361 ccaaaatagg aatagcggat atgcctaaaa tgggcgatta ttacataaca acattggttg
    12421 aaaatggcac aatgccaact acaattccac tcgctggttt cgatgaatgg attatcggct
    12481 accgagatcg ctccgtcgtt ttaccggaaa tatggcacga tgaaattatg acgaaaaatg
    12541 ggattttcag accggcgatt atcacggagg gcaaagtagt cgggaaatgg gaaaaaccaa
    12601 agaaacgtgc tgaattagac ggagatttct gggaccgtta catccagttt cgaaatatgc
    12661 tatagtcaag tagatggata aattttaatt tgaggtgata aagctatgaa tgcttttgat
    12721 aaattttaca aaaaaacagt agaagaacga cgtgcaattt tggcggaata tgccgactta
    12781 aatgaagaag agcaggcatt tttagcttct acaggggcgc tttcttttga taaagcgaat
    12841 catatgattg aaaacacgat tggcatttat tcgctgccgc tcggattagg aatgaacatg
    12901 cttttaaatg ataaacatta tgtggtaccg atggtgatgg aagagccttc tgttgtggcg
    12961 gcccaaagcg ctggggcgaa acttattgga caaaatggcg ggataactgg aagtgcaaca
    13021 aaacgaaaaa tgattggtca gattgagttg atttctgttt ctgatatcca agcagcaaaa
    13081 gaaaacatca ttgcgaacga agaacaacta attgctatcg ctaaccaagc tcatccatcg
    13141 ttacaaaagc gtggcggtgg tgcggttgaa attcaagtta gaacagcaca aacagcgaat
    13201 gacgaaacgt tacttatcgt tcatttactc gtagacaccc aagaagcaat gggcgcgaat
    13261 atggtcaata cgatggtcga aaccttagcg ccagaattag aaatgttgac gaacggaaca
    13321 gccaatatgc gcattttatc taatttagta gatgaagcga ccgcaacggc tgtttgccgg
    13381 attaatccag aaagcttagc gaccaaaacc cagagtggtg aatgggttcg tgatcgaatc
    13441 attgctgcat atgaatttgc tgatgcagac atttaccgag cagcaaccca taataaagga
    13501 ataatgaatg gtattgatgc ggtaattatg gcgtttggga acgattggcg cgcggtagaa
    13561 gcggcaagtc acgcctacgc agctagaaca ggaagctata aaccgatgtc taaatggtca
    13621 aaagatgcgg aggggtattt ggttggggaa ttaacgttac cgatgccagt agcctttgta
    13681 ggaggttcta tcggcatcca tccaatcgca acactttcga aaaaaattgc tcgagtagaa
    13741 tcagcgaagg aattagcgat gttagtttgt gccgttggat taacgcaaaa tctcgctgct
    13801 ttaaaagcac tcgtaacaga aggaattcaa cgcggacata tgtcgctaca agcgaaatca
    13861 ctagccatga cagccggtgc agaagcagat gaaatcgaaa aagtagccac atttttacaa
    13921 gaaagcaaac aattaaatgt agttgctgca aaagaattta ttaacaaatt acgcagtgga
    13981 aaataaaata aattattaag cctaccttta caaaaactta acaatacatt cggaacgtga
    14041 taaagccttt agtatcaaca actttcagag atttacttgg acttcacttt acaaaataaa
    14101 aaaaaggtat ttacgttact tttactttct tttatgatga aaaaagagtg aaattacaag
    14161 attacaaaca aaaaggagat attcatggga gacataaata ttcagcagat gatttttcaa
    14221 tttatcggag gacttggaat ttttcttttc ggtataaaat acatgggaga cggactgcaa
    14281 atggcagccg gcgacagact tcgtgatatt ttagataagt acacaacgaa tccttttatg
    14341 ggagtacttg ccgggatttt agtaaccgta ttaattcaaa gtagctcagg tacaactgtt
    14401 ttgacggtcg gattagtaag tgctggattt atgacgttaa aacaagcaat tggtgttatc
    14461 atgggagcaa acatcggtac aaccgttacc gcctttatta ttggtattaa gctatccgaa
    14521 tacgctttac caataattgc tgctggtgca gtacttttat tcttctttaa aaatcataaa
    14581 gtcaaaaata ttggccaagt attctttgga tttggtgcct tattttatgg actagatttg
    14641 atggggcaag ggatgaaacc tcttgctgga atggaatctt tccatgaatt aactgctcaa
    14701 atgagtacaa atccattctt aggtttgtta atcggaacga tcttcacggc agttgtacaa
    14761 tcatctagtg cgaccatcgg gattttacaa gaattatacg gacaaggtgc gattgatctt
    14821 caagcggctt tgccagtcct attcggggat aacattggaa cgacgattac agctgttctt
    14881 gcagcaattg gtgcgagtgt tgcagcgaaa cgtgcagcag ctacacatgt tatctttaat
    14941 ttaatcggtg caatcatttt tatgctgata ctaccgctat tcacttctct ggttacctac
    15001 ctacaaggac tgtttggact aaacccagaa atgacgattg cggttgcgca cgggacgttt
    15061 aatattacga atacctttat tcaattctgg tttatcggcg catttgcatg gcttgttacg
    15121 aagcttattc ctggcgacga ctcgcgaatt gactataaaa ccaaacattt ggatacgaat
    15181 ttaattgacc aatctcctgg tatcgctctt gaaatggcac gggaggaaac gcttcgtatg
    15241 gcagattacg cgaaattcgg gttgcaagaa gcgagacaat accttgtgaa ccgggaatcg
    15301 aagcatgcgg agtcaactat tcaagtggaa gaagccgtaa ataatttaga ccgaaaaatc
    15361 accgagtact taacgaaaat ttcttctgtc gccctaacga acaacgagac agaagaacat
    15421 gcgctaatgc ttgataccgt tcgtgatatt gaacgcgtcg gtgatcacat ggaaaacatc
    15481 gtagaaaaca tcgatcaact gattaagaat aaagcaaaaa tgtctgaaga agcttctgat
    15541 caactcatcg aaatgtttga gctaacaacc gcgaatttcg aacgtgcagt gaaatccatg
    15601 cataaaaaag atcgcgcact cgcagaagaa actattttag tagaaaaaga tattgataaa
    15661 gcagagcgca gattacgtaa aaaccatatt cgccgcttaa acgaaggcaa atgccaagtc
    15721 gttagcggaa ttctatacat tgatatcgtc agtgatttag aacgaattgg tgaccacgcg
    15781 aacaacattg ctgaatctgt tttggaatta aacgaataat tctaaaggga actagactat
    15841 ttgacgtctg gtttcttttt tttgttaaaa atctacactt ttactagtcc ttgtgaagca
    15901 ttgagtataa gcggatagtg gtgtaaaata agaatgatta taaaactaga atgactggaa
    15961 gtgttgagtc ttatgcgaaa tagaaaaaca atggatggaa acacggcagc agcttatatt
    16021 tcttatgctt ttactgaagt tgcagcaatc tatccgatta ccccttcctc caccatggct
    16081 gaacttgtgg acgaatggtc atcaaagaac aagaaaaatt tattcaatga acctgtaaaa
    16141 gtagtagaaa tgcaatcaga agcaggagca gcaggaacag ttcacggatc acttcaagct
    16201 ggtgcgctaa ctagcacata cacggcgagc caaggtttac ttttaatgat tcctaatatg
    16261 tacaaaattg ccggtgaact attgccaact gttttccatg tttccgcaag aacaatttca
    16321 gcagcctcgc taaatatttt tggcgaccat agtgatgtga tggcagcacg tcaaacagga
    16381 tttgcgatgc ttgcagaagg ttccgttcaa gaagtaatgg acttatccgc ggttgctcat
    16441 ctggcttcac taaaaggaag tttgccattt ttaaatttct ttgacggctt ccgcacaagt
    16501 catgaattac aaaaagtcga agtactcgaa tatgacgaat tagaaaattt gctcgacaaa
    16561 gaggcattac aacaatttag aaatcgcgca atgacaccaa ataatcctaa aactttaggt
    16621 tcgaatcaaa atccagatat ctttttccaa caaagagaaa cggtgaaccg ctattacgag
    16681 gaaatcccta acatggttca aaattatatg aaagaaatca atcagcttcg tggcacggat
    16741 tatgacttag ttaattatta tggagcagaa gacgcaacag atgtcattgt ggcgatgggc
    16801 tcagtaacgc cagtcattga gcaagttatt gattacttaa caacggaagg caagaaagtg
    16861 ggattactca atattcgctt atatcgtcca ttcccagcag aaaacttttt agcaaaacta
    16921 ccgaaaacag tagaacgtgt ggctgtttta gaccggacga aagaacccgg atcaggcgga
    16981 gaaccacttt tactcgacgt gcaaagtgtg ctttatgata gtgaaactcg tccactagtt
    17041 attggcggta gatatggctt aggttcaaaa gatgttacac cagaccagat tctcggtgtt
    17101 tattcgcacc taacgacaga aaaaccaaaa ccgcgcttta caattggaat tacagatgat
    17161 attacgaatc tatctatcga aaatgctgga ccaagtgatc tcacttcaga aaaaactttc
    17221 caatgcaaat tctggggttt tggctcggat ggtactgttg gcgcgaataa agccgcaatt
    17281 aaaattattg gtgataacac cgatttatac gcccaaggtt acttttccta tgattcgaaa
    17341 aaatcgggcg ggctaactgt ttcgcatttg cgctttggtg aaaaacgaat tcgctcagcc
    17401 tatctaatcc aacaagcgga ttttgtctca tgctctacct cggcctattt acgttcctat
    17461 gatttattaa aaggtttaaa accaggcgga acattcttgc tcaataccat ttgggaaggc
    17521 gaacagttag aacgccattt gccagccgca atgcgcgaat atattgcgaa aaataatatt
    17581 caattttata cattaaatgc aatgagaatt gcaggagaag cgggacttgg tagaagaatt
    17641 aataccgtta tgcaaacggc ctttttccga gtgaccgaca ttttaccgtt tgaaaaagca
    17701 cttgctgatt taaaagaatc ggctatcgct acttatggga aaaaagatat ggcggttgcg
    17761 gagaaaaata ttctcgcgat ggaccaaact gttgctaatt tgcataaagt agaagttcct
    17821 gcaagctggg caaatccagt tgtaacagca gaaacaaatg caacgactga aaaaccagct
    17881 tacgtacaaa atatccttga gccagtgaat cgcttagaag gcgacaactt gactgttggt
    17941 gatttaattt cgaatggtat ggtcagtggg gcttatcctc cggggactgc agcttacgaa
    18001 aaacgcggaa ttgcactcga agttcctgaa tggatttctg aaaactgtac gatgtgtaat
    18061 gaatgcgcct ttgtttgtcc gcatgctgcc attcgtccaa ttttaacaga tgaagaagaa
    18121 atggaatctg ctccagaagg ctttatgaca agagaaatgc gcggcaaaga tggccttcgt
    18181 taccgtatcc aagtttcccc aatggactgc actggttgta acttatgtgc ggaaacgtgt
    18241 ccggcgaaag ataaagcgct tgtaatgaaa ccatttgaag aagtcacagc taaagaaaat
    18301 ccgaattggt catttgcgat taatgtgaaa ccgaagaaaa accctgggaa gaaaaatact
    18361 gtacctggaa gccaatttga acaaccgtta ttggagttct ctggtgcttg tgcaggttgc
    18421 ggtgaaactc cttatgttaa attattaacg caaatgtttg gcgaccggat gatgattgct
    18481 aatgcaactg gttgttcctc tatttggggc gcatctgcac ctgcaacgcc ttatactgtc
    18541 aatgataaag gacatggacc ggcgtggggc aattcccttt tagaagataa cgcagaatat
    18601 ggttatggta tgtatttagc aaaccaaacc atgcgaaaag ctttaaataa taaagtgaca
    18661 aaagcactca gagaagaagc catgtcagaa acgttacgcg aggcgcttat tgactggcaa
    18721 acacaaatgg acgtttcaga agatacacgc gaacgggcag aagcattaca acttgcgctt
    18781 cttagtgaga tggaaggcaa tgaggcactc gaatccatct ataatgaccg agaattattt
    18841 attaaacgat cgcagtggat gcttggaggc gacggctggg cttatgatat tggcttcggc
    18901 ggaattgatc atgtgttagc atcaggcgaa gatgtaaata ttttcgtaat ggataatgaa
    18961 gtatattcaa atactggtgg acaatcatcg aaagccacac caaccgcagc aattgccaaa
    19021 tttgcttcag gcgggaaatc tgtcggcaaa aaagaccttg gtattatggc gatgagttac
    19081 ggaaatatct atgtggcgca aattgcgatg ggggcgaata aacgtcaaac cttaaaagct
    19141 attgaagaag cagaggcata tccggggcca tctctaatta ttgcttatac gccgtgtatt
    19201 aatcacggta tttcaagcgg tatgaaaacg atgctaagtg aaacgcaaaa agcagtagaa
    19261 tgtggctact ggagcttgta ccgttataat ccggcactag aagaaaaagg aaaaaatcca
    19321 atgacaatgg attataaaaa agtcgatttc gatcaattcg aagacttcct aaaacgcgaa
    19381 acacgatact cagcgcttta caaagcaaat ccagatgttg caacaaaact atccgaaaaa
    19441 acccgtttag atgcagaaaa acgctttaaa cgctatgcga cgatggctgg gcttgattta
    19501 gagaaaatat ggaagaaaaa agaagcaact gaagatgtga aagcgcccgt tgatgatgag
    19561 cgagcagcaa ggaaagcagc acgtgaagca agaagattag cgcgggagca aggtaaataa
    19621 aaaaagtagg cctagctgat gctaggccta cttttttgct tttgatctgt gggaatcaga
    19681 agcgatgtgg gaatgaatag atattctctt atgagagtta taaagaaata actactattt
    19741 aaatataact ttttttctca gaagatgcac tagaaaaatg aagagataag ttttcatata
    19801 agtgttagtt gttgcagccc aagctttttg ggacttgtga aagttttatg acaattaaaa
    19861 acctattagt taacggtttt catgaagcaa gccattacga taggcatcta gtaacaattt
    19921 taaatcttct gcctgctcac taagtttagc cccaatatcg gtatccctta cacgtttacg
    19981 gttaatttcc atttcaataa cttgacgcgt ggaaagaata tccgtttcat ttttgatagc
    20041 atcctctttt gtagtaaatg gctgatgact cactaattgt aaaccgtaac tattaaaaag
    20101 tagtgtataa cccgctaagt tcgtttcttt atgataggcc tttgcgaacc cgccatcgat
    20161 gacgagcatt ttaccattcg ctttaatcgg actttcacct tttccttctt tgactggcgt
    20221 atggccgtta atgatatgcc cacattcacc atcaagccca aattcttcta aaatttgttt
    20281 gcaaattaat tcgttattac gcaatttgta gtaaggattt ttttcttctg tgtgtgtttc
    20341 tttttctgca acaaaataac gttcaaatgt agtcatttca ctttttccaa atagcgaaga
    20401 aatggcacca gtccacaaat accaaacgat atcacatgca tatttctttt ctttagttcc
    20461 agttggacgt acgtatgctt cgcgggtaag tatttcaaac tgctctaaaa gcgaacgacc
    20521 agcatatttt tcgccacgta atttcatttc cataaaagtc ccatcttcgt ggagtggaat
    20581 gcagccatgg tagagtaaat taccattata agttaaaaac atgctgcctt ttgaatatag
    20641 aaattgtaca tgtttttgca atcgacgaca gtttttaaaa gcggcagtaa ttttcccaat
    20701 aagttctctc tccgcgtcag tgagttcata aggtttttct ggattaatcg ttggaaaatg
    20761 actgtctaac aacaggtatt cttttccctt tagatgaatt gtgccttttt tataatcgat
    20821 aaattgaagt aaaagtcggt gatccatatc aaattctttg cgtcgattta taatttcacc
    20881 ttccaattta aactgaataa tcgagatagc cttatgcatc ctagcaattt gcgtgatttc
    20941 tgcattacta tagttaatat tttcttcgtt tttgggctgg aagtaggtac aaggatcgtc
    21001 tttgtacact tcgtcggcaa aaagggccag ggggcgaaga gaaataccgt aactatcttc
    21061 taaaatatct aaatttaaat aacgggcaga aatccgaata acattagccg cacaaaccct
    21121 agaaccacta gccgcgccca tccataaaat atcgtgatta ccccactgga aatcgagcga
    21181 atggtaattc attaatgtat ccatgatttt atctggataa ggaccacgat catagacatc
    21241 accaacaatg tgcaaatgat cgacgaccaa ttgttgaata agtaacgaga gagcactaat
    21301 aaattcttct gcacgaccaa gtgaaataat atgttgtaaa atttcttcat aataaagctt
    21361 tttgtcgtct tcattgtagt tttcatgaag taactcttct aatatgtagg caaaatcttc
    21421 gggcatggct tttctcactt tagaacgtgt gtattttgaa gcaacgtact ggcagagttc
    21481 aatcaaacga aaaagtgtgg tgcgatacca agcctgcaaa tcttctgttt cactagcaag
    21541 caaatccatc ttttcttctg gataataaat cagtgtacta agtgaattaa tctctgcatc
    21601 atctagctcc gcgccaaaaa tatcacgaat tttccgtttt acaacaccag aaccattacg
    21661 aagcacttgt tcaaaagcac tatattcacc gtgaacatca cttaaaaaat gttccgttcc
    21721 ttttggaagg ttcataattg cttcgagatt aatgatttcc gtagctgtct tggcaatagt
    21781 aggatattct tttgctaaca agcgtaaata tttcatatca atagttttca ccagtccagt
    21841 acctcctttt tcaattggta tagctattat atttcttaaa tgtaagcaag gcaaacgttt
    21901 tgttttataa ttggtctata caaaaaagac gagctagagc ccgccttaga aaactggatg
    21961 aagaaaatag agcacaatgg gtaaggtaat aatacttaaa actgtactaa taaatgtggc
    22021 actagaaact aaatctggtt ttgtatcaaa ttgtacagcc attaaagtag tattcgctgc
    22081 agttggcata gctgcaagta aaatcataat ttgttttgtc atttcgtcaa cagggagaat
    22141 caacgttaaa ccaaacgcaa tgattggagc aatgagtaat ttgagtacta atgcaatgcc
    22201 tacttttgta agttcgattc gtctaaacga aataactgcc aactgcattc caaggacaat
    22261 cataattgtt ggaatagcag cgtcgccaac aagttttacg caagtcatta aagcggatgg
    22321 aagtgaaaca tgaagtaatt gaagcgtaag cccgagtaaa gccccgtaag caatcggcat
    22381 ccgaacaacc cgtttcatga ccgttttcat tccatttgca tctttacttc cttttgcggc
    22441 aaaataaatc ccaatggtac tcatagctag ttgctgcaac accattaata caacagcaat
    22501 atcaagccca acagccccaa aaacaagcaa gacaacaggt gttccataat ttccattatt
    22561 cataaaagca ctagccaaaa tgagcgcgca acgatcttgc aagttataac caagcaaaaa
    22621 actaattaaa ctgacaagca aaatcaaact cagacaaagc gcaaaaatgt aaatcgccaa
    22681 atatgcataa tctatcgtta gcgcattggt ataaaaagta ttaaatgcaa gaaacggtga
    22741 cattaagtaa agcgtgagtt tagataagtt aggaatatca aattttaaag tcttttgtcc
    22801 aataaaccca atagcgaaga tcccaaaaac tggaagtaaa ataagtagaa attccatggc
    22861 gcccctcttt tctatgtata ttgtagctta ttgtaccata aaatgaagtt tcagttagac
    22921 acttttacat gttaccagtt tagtatttat cttaatctaa cagt
//
LOCUS       DASDYO010000034        22630 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.034, whole genome shotgun sequence.
ACCESSION   DASDYO010000034 DASDYO010000000
VERSION     DASDYO010000034.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 22630)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22630)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22630
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.034"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            105..461
                     /locus_tag="U0290_001134"
     CDS             105..461
                     /locus_tag="U0290_001134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464859.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301179.1"
                     /translation="MTTVIIILLIAAIALFVISFLQKGDNKQLEKELEDVAAQWMQEN
                     FELKQRISELEKAMKMDSPSIEAEQVPDSPKVRELMKKQVITLYTSGIVTSEIAEQSS
                     LPKEEVEKIIEEYLKH"
     gene            489..968
                     /locus_tag="U0290_001135"
     CDS             489..968
                     /locus_tag="U0290_001135"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEM2301180.1"
                     /translation="MKKNLRMLALGFLISAVVLLVYNQFFSTQTKADETKAASTKAGS
                     DENSSTWKNKYEKLLAQQEVDKATEAEAKKKAEEDAKKKAEEAKKVKSYTLKISKGDP
                     SSKAGDELQANGIIKSASDFDKYLRDNNYEKYIRDGSYNLKSDMSYETIAKILTHKN"
     gene            1131..2171
                     /gene="rsgA"
                     /locus_tag="U0290_001136"
     CDS             1131..2171
                     /gene="rsgA"
                     /locus_tag="U0290_001136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome small subunit-dependent GTPase A"
                     /protein_id="HEM2301181.1"
                     /translation="MTLEQYGFTNFFKEQKIAATSSYGRVTAVFRDYYRVITENEEFL
                     ASLKRGNFYELSSTSLPAVGDFVEVSSDAQILSVLERKTVFSRMNKDSEEQLIAANFD
                     YALIVMSLNHDFNLNRLERYLTVAWDSGATPIIILTKADLVEDLTAFAQQLETVAYGV
                     PAYYVDNLSHHGFEALERDLKPNSTLVLLGSSGVGKSSFINSLAGTDLMKTAGIREDD
                     SKGKHTTTHREMHLLTNGWIVIDTPGMREFGVGFNQAGLETTFSDVEELAEGCRFHDC
                     SHTQEPGCAVKAALEDGTLTMQHYENWLKLQREMAYHARKNSPALARQERDRWKVIQK
                     SLRTHLKTRPKK"
     gene            complement(2210..4381)
                     /gene="pnp"
                     /locus_tag="U0290_001137"
     CDS             complement(2210..4381)
                     /gene="pnp"
                     /locus_tag="U0290_001137"
                     /EC_number="2.7.7.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyribonucleotide nucleotidyltransferase"
                     /protein_id="HEM2301182.1"
                     /translation="MSEKQVFSTEWAGKTLSVEVGQLAKQASGAALIRYGDTVVLTAA
                     VGSKKPRPGDFFPLTVNYEEKMYSVGKVPGGFLKREGRPSDRATLTARLIDRPIRPLF
                     AEGFRNEVQITSTVFSVDQDCSPEMAAMLGSSVALVISDIPFEGPIAGVDVGRIDGKY
                     VINPTIEQAEKSDISLTVAGTYDAINMVEAGAKEVSEEAMLEAIMFGHEEIKRLCEFQ
                     QQIIAAVGKEKREIELFVSDPELEAEVKAASEGKMKAAIKTEEKKAREAAIEDVKEEI
                     LESYKAKELENEAEILSEVAHILEMIEKDEMRRLISQDKIRPDGRKVNEIRPLSSEVG
                     MLPRVHGSGLFTRGQTQALSVCTLAPLREHQIIDGLGTEEYKRFMHHYNFPQFSVGET
                     GPRRAPGRREIGHGALGERALQYVIPSEEEFPYTIRLVSEVLESNGSSSQASICGSTL
                     AMLDAGVPIKAPVAGIAMGLVKLGDDYTILSDIQGMEDHFGDMDFKVAGTKDGITALQ
                     MDIKIDGLSRQILDEALTQAKEGRLHILEHLTSTISAPREELSAYAPKIITLNIKPEK
                     IKDVIGPGGKQINAIIDETGVKIDIEQDGTVYIASQDQAMNRKAIAIIEDIVREVEVG
                     EVYTGKVRRIEKFGAFVELFKGTDGLVHISELAHERVGKVEDILKLGDEVTVKVIEVD
                     QQGRVNLSRKALLEKKEQPEGDKKPQAEKKFYPKTKKPESK"
     gene            complement(4629..4898)
                     /gene="rpsO"
                     /locus_tag="U0290_001138"
     CDS             complement(4629..4898)
                     /gene="rpsO"
                     /locus_tag="U0290_001138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011275926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S15"
                     /protein_id="HEM2301183.1"
                     /translation="MALTQERKNEIIAEYRVHDTDTGSPEVQIAVLTAEINSLNEHVR
                     VHKKDHHSYRGLMKMVGHRRNLLTYLRKKDVQRYRELIKRLGLRR"
     gene            complement(5035..5979)
                     /locus_tag="U0290_001139"
     CDS             complement(5035..5979)
                     /locus_tag="U0290_001139"
                     /EC_number="2.7.1.26"
                     /EC_number="2.7.7.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional riboflavin kinase/FAD synthetase"
                     /protein_id="HEM2301184.1"
                     /translation="MKTIYLHHPITTDEWTDINKVMALGFFDGVHLGHQAVIKKAKQI
                     AEKKGLQTAVLTFDPHPSVVLSNIRKQVKYLTPLEDKAEKMAELGVDIMYVVRFTTQF
                     SELSPQAFVDNYLVALHVQHVVAGFDYSYGKKGEGKMTDLAKYADGRFEVTIVDKQTA
                     ASDKISSTNIRRAIIEGELEEANQLLGYPYTTKGTVIHGDKRGRTIGFPTANIRVNED
                     YLIPKLGVYAVKFRVNGETHLGMASIGYNITFKDDQALSIEVYILDFHREIYGEEAEI
                     EWYQFFRPELKFNGVEGLIAQLEKDEQDTRAFFANLED"
     gene            complement(6049..6963)
                     /gene="truB"
                     /locus_tag="U0290_001140"
     CDS             complement(6049..6963)
                     /gene="truB"
                     /locus_tag="U0290_001140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA pseudouridine(55) synthase TruB"
                     /protein_id="HEM2301185.1"
                     /translation="MNGIIPLWKERGMTSHDCVFKLRKILHTKKVGHTGTLDPEVEGV
                     LPICIGRATKLAEYVTDEGKVYVAEITLGKSTTTEDATGETVMTKELADISADELQAA
                     LTKLTGKITQIPPMFSAVKVNGKKLYEYARAGIEVERPSRQVDIYSLTRLDGEATLNE
                     ANPTFQLEISCGKGTYIRTLAVMIGELLGYPAHMSKLERTRSGFFKKEDCLTLAEIDE
                     MMQASDSSFLYPLEKGIESMAKLVIDEEIHAKVLNGGLLPKSLFIEVENEPRAALIFN
                     DKLTAIYKPHPEKNELWKPEKVIELHQA"
     gene            complement(7059..7403)
                     /gene="rbfA"
                     /locus_tag="U0290_001141"
     CDS             complement(7059..7403)
                     /gene="rbfA"
                     /locus_tag="U0290_001141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosome-binding factor RbfA"
                     /protein_id="HEM2301186.1"
                     /translation="MNVRANRVSEQMKKELGDILNRKIKDPRLGFVTVTGVDVTGDLQ
                     EAKVFISILGTDKEKENTLLALAKAHGFIRSEIGCRIRLRKVPEMSFEIDNSIAYGNR
                     IDELLRDLNNDQ"
     gene            complement(7420..7698)
                     /locus_tag="U0290_001142"
     CDS             complement(7420..7698)
                     /locus_tag="U0290_001142"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF503 domain-containing protein"
                     /protein_id="HEM2301187.1"
                     /translation="MIQSVVSEFFMQEPQNLKEKRAILKRIVTRAKQKFNISIAETDY
                     QDLWQRAEISFAIVSSSHIQAEKEAREVLAFLDSFPEWERAETVMEKL"
     gene            complement(7695..10043)
                     /gene="infB"
                     /locus_tag="U0290_001143"
     CDS             complement(7695..10043)
                     /gene="infB"
                     /locus_tag="U0290_001143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-2"
                     /protein_id="HEM2301188.1"
                     /translation="MSKVRVYEYAKEHQVSSKKVIEALKDLGIEVANHMSTINENALR
                     QLDNAIDGTNKKAEAPKKETTSNENGNSKGPNKPNMTNSNEKSNKPNNPAGQANKPAT
                     ANKSQGAKPATNKPANTSKQTQSSGNQQQAGGQKRNNNNNSNRPGGGNPNRPGGNNRP
                     NRGGNFNNKGRNTKKKGKLNHSTVPPTPPKPKELPEKIVFSESLTVAELAKKLYREPS
                     ELIKKLFMLGVVATINQSLDKDAIELICDDYGVQVEEEIKVDVTDLDVYFENELNEAV
                     DESKLVERPPVVTIMGHVDHGKTTLLDSLRNTKVTLGEAGGITQHIGAYQLEIHDKKI
                     TFLDTPGHAAFTAMRARGAQITDITILVVAADDGVMPQTIEAINHAKAAGMPIIVAVN
                     KIDKPQANPDRVMQELTEYELVPEAWGGDTIFAPISAKFGEGLENLLDMILLVSEVEE
                     LKANPDRRAIGSVIEAELDKGRGPVATLLVQDGTLNIGDPIVVGNTFGRVRAMVNDLG
                     RRVKKVGPSTPVEITGLNDVPQAGDRFVVFEDEKTARNIGETRASRALVAQRSATNRV
                     SLDNLFEHMKAGEMKEVNVIIKADVQGSVEALAASLRKIDVEGVNVKIIHTAVGAINE
                     SDITLAAASNAIVIGFNVRPTAQAREAAENESVDIRLHRVIYKAIDEIEAAMKGMLDP
                     EFQEKIIGQAQVRQTINVSKVGTIAGCYVTDGKITRDSGVRIIRDGIVVFEGEIATLK
                     RFKDDAKEVAKGYECGITVQNFNDIKEDDVIEAYVMEEIERK"
     gene            complement(10066..10365)
                     /locus_tag="U0290_001144"
     CDS             complement(10066..10365)
                     /locus_tag="U0290_001144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxQ family RNA-binding protein"
                     /protein_id="HEM2301189.1"
                     /translation="MDKKALSLLGLANRARKITTGEELVLKAVRNGKAKMVLISEDIS
                     EKTEKTIRNKCEYYNVVVKKAGTREMIGGAIGKDTRAIVAILDKGFAVKLAELLG"
     gene            complement(10358..10642)
                     /locus_tag="U0290_001145"
     CDS             complement(10358..10642)
                     /locus_tag="U0290_001145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlxR family protein"
                     /protein_id="HEM2301190.1"
                     /translation="MRNKKIPLRKCIITGERLPKGELLRIAYSKDGALTIDPTGKAPG
                     RGFYIIKSVEVCEKAKKKNAIFHQLKMPEQESFYDELITYVKSLEEPTNG"
     gene            complement(10657..11775)
                     /gene="nusA"
                     /locus_tag="U0290_001146"
     CDS             complement(10657..11775)
                     /gene="nusA"
                     /locus_tag="U0290_001146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination/antitermination
                     protein NusA"
                     /protein_id="HEM2301191.1"
                     /translation="MSTELLDALHVLEHDKGISREVLVEAIEAALTSAYKRNFKDAQN
                     VRVDLNMENGSIRVLARKEAVEQVFDSRLEISMEEAHKLNPVYKPGDVVELEVTPKDF
                     GRIAAQTAKQVVTQRVREAERGIIYDEFIDREDDIMTGIVERQDSRFIYVNLGKIEAI
                     LSQNEQMPNETYHAHDRIKVYLTKVEKTTKGPQIFVSRTHPGLLKRLFEMEVPEIYDG
                     VVEIKSVAREAGDRSKISVYTANEEVDPVGACVGPKGARVQTIVNELKGEKIDIVEWS
                     EDPFTFVANALSPSKVLDVIVNEADQATTVIVPDYQLSLAIGKRGQNARLAAKLTGWK
                     IDIKSETVATELGIYPRNDVEAPEVEDAESETYTEDEE"
     gene            complement(11805..12272)
                     /gene="rimP"
                     /locus_tag="U0290_001147"
     CDS             complement(11805..12272)
                     /gene="rimP"
                     /locus_tag="U0290_001147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimP"
                     /protein_id="HEM2301192.1"
                     /translation="MSKVLEQVEAIVTPITDELQLELVDIAFEKEGPNWFLRIFIDKD
                     GGVDIDECAAVSEKVSEKMDENDPITQNYFLEVSSPGAERPLKKEQDFENAVSKYVHV
                     TSYEPIDGRKMWEGTLVSYDGTTLVITITDKTRKITCEIPKDKVAKARLAIQF"
     gene            complement(12454..16788)
                     /locus_tag="U0290_001148"
     CDS             complement(12454..16788)
                     /locus_tag="U0290_001148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit alpha"
                     /protein_id="HEM2301193.1"
                     /translation="MTAKEEEKQERFQLLMTQIGLQDVTTYEEFTKDAKIEKLVADKK
                     NKTWQFHLHVPQIFPAALFHMMDVGMKRAFSQIAETEMQIVPENQTIDETLIQDYWNL
                     IVEPIGKQSPMIGKLLMEQKPTFKEPHFIEVAVHNDMEEATIQQRFQTKIIESYGKAG
                     FPRLAMKMHLLDQSETEEYKAFALAKQEEDQKKAAEAVQVMQKRQAEGQSGGGGAAPL
                     TGPFQIGYKIKDDEEVKRLGDIYDEERRITVQGLIFATEIRELRSGRSLLQFKITDYT
                     SSMIIKMFSRDNEDAAMFQNLKKGMWVKVRGSVQNDTFVRDLIMMAQDVNEIAGVKRL
                     DTAEEKRAELHLHSPMSQMDATSSVDSLFKQAADWGHKAIAITDHSVAQSFPEAYGAG
                     QKYGLKVIFGIEANLIDDGVPIAYNDQHIALEDATYCVFDVETTGLSAVYDTIIELAG
                     VKMKNGEIIDKFEAFIDPGHPLSATTINLTGITDDMVKGSDPIDVVLKRFKEWSGDDI
                     LVAHNASFDMGFINTAYEKVGLEKAENAVVDTLELARFLYPHFKNHRLNTLTKKFNII
                     LEQHHRAVFDAEATAYLAWKLIKDAKEMHNIDFHDSLNDYMGEGDAYKRARPFHATIY
                     AQTAVGLKNLFKLITMSNINYFYRVPRIPRSQLKKLREGLIIGTACSQGELFEAMMQK
                     GMQAAEKVAEFYDFIEVQPKPVYAPLIERELVRDEKALEEILKNIVRVGEKTGKPVVA
                     TGNVHYKDPVDKIYRKILIHSQGGANPLNRAELPDVHFRTTDEMLKEFAFLGEEKAKE
                     IVVTNANLVVDWMEDLKPIKDELYTPKIDGAEDEVRNMSYAMAHQLYGEKLPEIVEAR
                     LEKELKSIIGHGFAVIYLISHKLVKKSLVDGYLVGSRGSVGSSFVATMTEITEVNPLP
                     PHYLCPNCKDSEFFDDGSVGSGFDLPDKDCPHCGTPYQKEGQDIPFETFLGFKGDKVP
                     DIDLNFSGDYQPVAHAYTKEIFGEDYVFRAGTIGTVAEKTAFGYVRNYERDMNMTIRG
                     AEIDRLVAGCTGVKRTTGQHPGGIIVIPDYMDVYDFTPVQFPADATDSEWKTTHFDFH
                     SIHDNVLKLDILGHDDPTAIRMLQDLSGIDPKTIPTDDPDVMKLFGSTESLGVKPADI
                     DSKTGTLGIPEFGTRFVRQMLEQTKPTTFSELVQISGLSHGTDVWLGNAEELIKNKTC
                     ELPDVIGCRDDIMVFLIYQGLESSLAFKIMESVRKGKGLTEEMEEAMMANKVPLWYIE
                     SCKKIKYMFPKAHAAAYVLMAVRIAYFKVHYPLYFYATYFTVRADDFDLTSMVNGKEA
                     VKATMKEVNDKGMEASTKEKNLLTVLEIANEMLARGFHFQKVDLYKSSADEFIIDGDS
                     LIPPFNAIPSLGTNVAKQIVAARENGEFLSKEDLQQRGKVSKTIIQYMDDQGCLEGLP
                     DQNQLSLF"
     gene            complement(16894..18600)
                     /locus_tag="U0290_001149"
     CDS             complement(16894..18600)
                     /locus_tag="U0290_001149"
                     /EC_number="6.1.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_007474535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline--tRNA ligase"
                     /protein_id="HEM2301194.1"
                     /translation="MRQTMTFIPTLKEVPADAEVKSHQLLLRAGFIRQTASGIYSYLP
                     LATLMLRKIETIIREELEAIGAAELLMPALQPAELWQESGRWNDYGPELMRLKDRASR
                     DFALGPTHEEVITALLRDEVKSYKRLPLTLYQIQTKFRDEKRPRFGLLRGREFIMKDA
                     YSFHATSESLDEVYNLMHQAYSNIFTRCGLEFRSVIADSGSIGGNESKEFMALSDIGE
                     DTIAYSDASDYAANTEMAPVLYMEKKSHELEKDMEKVATPDQKSIADIVEFLEVPIEK
                     TMKSMLYQVDDEVIMVLVRGDHEVNDIKIKNALDATNVELVDPAVAVELLGANFGSLG
                     PINVPENTRVFADNAVKDIVNAVVGANEDGFHYINVNPDRDFSVTSYFDLRMIQVGDL
                     SPDGQGVIKFAEGIEVGHIFKLGTKYSEAMNATILDENGRAQPIIMGCYGIGVSRILS
                     AIAEQSNDENGFVWDKQISPFDLHLIPVNMKSEEQVAFAETLYSSLQDAGFSVLIDDR
                     AERAGVKFADADLIGLPIRITVGKKAAEGVVEVKIRKTGEMIEVRQDELLNTLPILFG
                     DK"
     gene            complement(18641..19903)
                     /gene="rseP"
                     /locus_tag="U0290_001150"
     CDS             complement(18641..19903)
                     /gene="rseP"
                     /locus_tag="U0290_001150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RIP metalloprotease RseP"
                     /protein_id="HEM2301195.1"
                     /translation="MTTIIAFIFVFGLIVFFHELGHFLFAKRAGIMVKDFSIGFGPKI
                     FAYRKKETQYTIRLLPIGGYVRMAGEDGEEIELKPGYRVGLELTPEETVSKIIVNGKD
                     QYVNAQPIEVSLCDLEKELFIEGYEDYDDTKKVRYQVERDALVIDGKIETMITPYDRS
                     FNAKSLGNRAMTIFAGPLFNFILAILIFTALAFVQGGVPSTDNTLGNVLPDGAAAEAG
                     LKKGDEVLSINGKETKSWTDIVQSVSENPGKTLDFKIERDGKTQDIDVKPATQKENGK
                     DVGKIGVETPMDSSFTAKITNGFTQTWNWIVQIFTILGNMFTGGFSLDMLNGPVGIYT
                     STQQVVQYGFMTVLNWTAVLSINLGIVNLLPLPALDGGRLMFFLYELVRGKPIDPKKE
                     GIIHFAGFALLMVLMILVTWNDIQRAFF"
     gene            complement(19917..21059)
                     /locus_tag="U0290_001151"
     CDS             complement(19917..21059)
                     /locus_tag="U0290_001151"
                     /EC_number="1.1.1.267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-deoxy-D-xylulose-5-phosphate reductoisomerase"
                     /protein_id="HEM2301196.1"
                     /translation="MKKIILLGATGSIGTQTLAIIRENPEKFQIVALSFGRNMERGRA
                     IIKEFKPKMVAVWHTRDRVILEAEFPNVKFFNGLEGLREVATYLDGDVLLNAVMGSVG
                     LLPTLDAIEAGKAIAIANKETLVTAGHLVMRAAKEKNISLLPVDSEHSAILQALNGEN
                     TERIEKLVLTASGGSFRDKTREQLSEVTVKEALKHPNWNMGNKLTIDSATMFNKGLEV
                     MEAHWLFGVDYDDIEVVIQRESIIHSMVQFVDGSFIAQLGTPDMRMPIQYALTYPDRL
                     YIPYEKEFRITDFSALHFEKVDYERFPALKLAYNAGKIGGTMPTVLNAANEIAVAGFL
                     NGQVAFYNIEALVENAMNRHTSISDPDLDTILQVDQETRAYVKTLL"
     gene            complement(21074..21862)
                     /locus_tag="U0290_001152"
     CDS             complement(21074..21862)
                     /locus_tag="U0290_001152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidate cytidylyltransferase"
                     /protein_id="HEM2301197.1"
                     /translation="MKTRIITAVVALIFFIPFVVYGGIPFELLSILLATIALYEVLVM
                     TKQRIFSMNGIITLLLMWLVVVPDRYLDFLDTLHITEMEVIFILMALLLANTVFSRNK
                     FHFDQVGICMVAAFYTGFGFHYLALTREAGLMYVLFALFIVWSTDTGAYFIGKAIGKH
                     KLAPNVSPNKTVEGFIGGIVCALVIAGGFYYFAELPGNIALVLALLVFLSIFGQLGDL
                     VESALKRFYGVKDSGKILPGHGGILDRFDSLLFVLPLLHILQII"
     gene            complement(21876..22601)
                     /locus_tag="U0290_001153"
     CDS             complement(21876..22601)
                     /locus_tag="U0290_001153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010282358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoprenyl transferase"
                     /protein_id="HEM2301198.1"
                     /translation="MLNSELAEDLPIPRHVAIIMDGNGRWAKKRFLPRIAGHKEGMDV
                     VKRVTRYANAIGIDVLTLYAFSTENWKRPTDEVDFLMKLPVEFFDSFVPELIEENVRV
                     NVMGYRENLPNHTMRAVEKAIADTAHCTGLTLNFALNYGGRSEIITAAKEAMKELELK
                     GKSADDLTEEKLNDHLMSSGLGDPDLLIRTSGELRLSNFMLWQLAYSEFYFTDTHWPD
                     FSKEDFLQAIIEYQNRSRRFGGL"
BASE COUNT         6429 a         4757 c         3995 g         7449 t
ORIGIN      
        1 ttctttttat tttctttaca aaaccttatt tcggatggtg ttttgaggta aattatgcta
       61 taactagtag tagagtttat ggaagagagg tgtgtataaa acccatgacc acagtcataa
      121 ttatcttact aattgctgct attgcgctgt ttgttatttc atttctacaa aagggtgaca
      181 ataaacaatt agaaaaagaa ctggaagatg ttgctgctca gtggatgcaa gaaaactttg
      241 aactaaaaca acgtatctct gaactagaaa aagcaatgaa aatggatagc ccaagcattg
      301 aagctgagca agttcctgat agcccgaaag ttcgtgaatt aatgaaaaaa caagtgatta
      361 cactttatac ttctggaatc gtaacttcag aaattgctga acagtcatct ttacctaaag
      421 aagaagtgga aaaaatcatt gaagaatatt taaaacattg atttaaattt taaaggagga
      481 gcctatctgt gaagaaaaac ttacggatgt tggcgctagg tttcttaata tctgctgttg
      541 tcttactggt gtataaccag tttttctcca cacagaccaa agcagatgaa acaaaagccg
      601 catcaacaaa agctggttct gatgaaaatt caagcacatg gaaaaataaa tacgaaaaat
      661 tattagctca gcaagaagtg gacaaagcaa cggaagctga agcaaagaaa aaggctgaag
      721 aagatgctaa aaagaaagca gaagaagcaa aaaaagtaaa aagttatact ttaaagattt
      781 ctaaaggaga tccttcttct aaagctggtg acgaacttca agcaaatggt attattaaaa
      841 gtgcttcaga ttttgataaa tatttacgag ataataatta tgaaaagtac attcgtgatg
      901 gtagttataa tctcaaaagt gatatgagct atgaaacgat tgctaaaatt ttaacgcata
      961 aaaattaata caaaaaaagg aaataagtct agagcttgtt tccttttttg tgttattatt
     1021 taagaaagaa aggatgatga attatggcaa ttgtaaaaat ggaaaacctc ataattaata
     1081 cgggggtatt ttacctatag aatgctccca actacaaagg agcgaaaaca ttgacattag
     1141 aacaatacgg ttttacaaat ttttttaaag aacaaaagat agctgcaacc tcctcttatg
     1201 gtagagttac ggcggtattt agagattatt atcgcgttat tacggagaat gaagaatttt
     1261 tagcatcatt gaaacgtgga aatttttatg aactatcctc tacttccctt cccgctgttg
     1321 gtgattttgt agaggtcagt agcgatgcgc aaatactctc tgtactagag cgtaaaacgg
     1381 tcttttctcg gatgaataaa gactcagagg aacaattgat tgcagcgaat tttgattatg
     1441 ctctcattgt gatgagtttg aatcatgact ttaatttgaa tcgattagag cgttatttga
     1501 cggttgcttg ggatagtggt gcaacaccga ttatcatttt aacaaaagca gatttagtgg
     1561 aggatttaac agcctttgct cagcagctcg agacagttgc ttatggcgtt ccagcatact
     1621 atgtggataa tttatcacat catggttttg aagctttaga acgcgattta aagccgaata
     1681 gtacgcttgt tttgcttggc tcttccggtg tcggaaaatc ttcttttatt aattcgcttg
     1741 caggtactga tttaatgaaa actgctggta tccgcgaaga tgatagtaaa ggaaaacata
     1801 cgacgacaca tagggaaatg catttgctta cgaatgggtg gattgtgatt gatacacctg
     1861 gaatgcgtga attcggtgtt ggttttaacc aagctggatt agaaaccact ttctcggatg
     1921 tagaggaatt ggctgaagga tgtcgttttc acgattgctc tcatacacaa gaaccaggtt
     1981 gcgctgtaaa agcagcatta gaagatggca ctttaactat gcaacactac gaaaattggt
     2041 tgaaattgca gcgagaaatg gcttatcacg ctcgaaaaaa tagccctgct ctcgcaagac
     2101 aagaacgtga ccgctggaaa gttattcaaa aatcacttcg gacacattta aaaacacgtc
     2161 caaaaaaata gtaaaaaaag caagtagctc aggctacttg ctttttgtat tatttagatt
     2221 ctggtttttt cgttttagga tagaattttt tctctgcttg tggtttttta tcgccttctg
     2281 gttgttcttt tttctcaagc aaagctttac gtgataagtt aacgcgacct tgttggtcta
     2341 cttcgataac tttaacagta acttcatcac ctagttttag gatatcttct actttaccaa
     2401 cacgttcatg tgctaattca gaaatgtgaa ctaagccatc tgtacctttg aataattcaa
     2461 caaatgcgcc aaatttttcg atacgacgaa cttttccagt ataaacttct cccacttcca
     2521 cttcacgaac gatgtcttcg atgatagcaa ttgctttacg gttcattgct tgatcttgag
     2581 aagcaatgta cactgtacca tcttgttcga tatcaatttt tacgccagtt tcatcaataa
     2641 ttgcattgat ttgttttccg ccaggtccaa taacatcttt gattttctca ggtttgatgt
     2701 taagtgtaat gatttttgga gcataagcag aaagttcttc acgtggtgcg ctaattgtgc
     2761 tagtcaagtg ttctagaatg tgtaggcgcc cttcttttgc ttgcgttaat gcttcgtcca
     2821 aaatttggcg gcttaagcca tcaatcttga tgtccatttg aagtgctgtg ataccatctt
     2881 ttgttccagc aactttaaag tccatatcgc caaagtgatc ttccatacct tggatatcag
     2941 aaagaatggt gtaatcatcg ccaagtttga caagacccat tgcgatacct gcaactggcg
     3001 ctttaattgg aacaccagca tcaagcattg caagtgtaga accacaaata cttgcttgcg
     3061 aactagagcc attagattca agaacttcag atactaaacg gattgtgtac gggaattcct
     3121 cttcggaagg aataacatat tgtaacgcac gttcacctaa tgcaccgtga ccgatttcac
     3181 gacgacctgg agcacgacga ggacctgttt ccccaacact aaattgcggg aagttataat
     3241 gatgcataaa gcgtttgtac tcttctgtcc ctaaaccatc aatgatttgg tgttcacgaa
     3301 gcggtgccag tgtacataca cttagagctt gtgtttgacc acgagtgaat aaacctgaac
     3361 catggacacg aggaagcata ccaacttcag aagaaagtgg acgaatttcg tttactttac
     3421 gaccatctgg acggatttta tcttgagaaa tcaaacgacg catttcgtct ttttcgatca
     3481 tttcaagaat atgagctact tcgctaagaa tttctgcttc gttttctagt tcttttgctt
     3541 tatagctttc taaaatttct tcttttacat cttcaattgc tgcttcacgt gcttttttct
     3601 cttctgtttt gatagctgct ttcattttgc cttcacttgc tgcttttact tctgcttcaa
     3661 gttcaggatc gcttacgaaa agttcaattt cgcgtttttc tttaccaact gcagcgataa
     3721 tttgttgttg gaattcacaa agacgtttaa tttcttcgtg accgaacatg attgcttcaa
     3781 gcattgcttc ttctgaaact tctttcgctc cagcttctac catgttgatt gcatcataag
     3841 ttcctgcaac ggttaagcta atatcacttt tttctgcttg ttcgatagtt gggttgataa
     3901 cgtattttcc atcgatacga cccacatcca caccagcgat cggtccttca aatggaatat
     3961 cggaaataac taatgcaaca gaagagccaa gcattgctgc catttctgga gaacaatctt
     4021 gatccacact gaaaacagta gatgtaattt gaacttcatt acggaaacct tctgcaaata
     4081 atggacggat tggacggtca attagacgcg ctgttaatgt cgcacggtca ctaggacgtc
     4141 cttcacgttt taaaaatcca ccgggaactt taccaacgga gtacattttt tcttcatagt
     4201 taactgttag tgggaaaaag tcgcctggac gtggtttttt agaacctact gctgctgtta
     4261 aaacgaccgt atcgccgtaa cgaattaagg ctgctccact tgcttgtttt gctaattgac
     4321 ctacttcgac agataatgtc ttacctgccc attctgttga aaatacttgt ttttcagaca
     4381 tattttaatc tcctttgatt aggaaaaaca cgaaccagaa actttaccat gcataagaat
     4441 gttcacgcac actttagatt ttctaaagca cacatgaatc caaaaacctg ctaaaaatag
     4501 cgatttttga agcacgtttt tggattcatg cgataaagtt tcatttcttc ggcgtgtttt
     4561 ccaaaattta gtatagttaa tactcaaaaa aaagcgggaa cttttggtat cccgctttcg
     4621 tctggttttt atcgacgtaa acctaaacgt ttgataagtt cgcggtaacg ttgaacatct
     4681 tttttacgta ggtaagttaa taggttacga cggtgaccta ccattttcat taatccacgg
     4741 taagagtgat gatctttttt gtgtacgcga acgtgttcat ttaagctatt gatttcagca
     4801 gttaatacag cgatttgtac ttctggtgaa ccagtatctg tatcatggac acggtactct
     4861 gcaataattt catttttgcg ttcttgagtt aaagccattt ctttccacct ccttctaaaa
     4921 tatccccaat tactgagcca agcgtcggtg agtcgcaaaa gccaagtaat ggttctgttc
     4981 gtacagattt aaagatacac tatttaggct ctaaaagcaa gcagaaatag tcgtttaatc
     5041 ctctaaatta gcaaaaaatg ctcttgtatc ttgttcgtct ttttctaact gagcaattaa
     5101 accttctacc ccattaaatt taagttctgg tcggaaaaat tgataccatt caatttctgc
     5161 ttcttcgccg taaatttcgc ggtgaaaatc tagaatatat acttcaatgg acagcgcttg
     5221 atcgtcttta aacgtgatat tgtagccaat gctagccatc cccaaatgag tttccccgtt
     5281 cacgcgaaat tttactgcat agacaccaag tttcggaatc aagtaatctt catttacacg
     5341 gatattcgct gttggaaaac caattgttct acctcgttta tctccgtgaa tgacggttcc
     5401 ttttgttgta tatggatagc ctagtagttg atttgcttct tctaactcgc cttctataat
     5461 cgcacgtctg atatttgttg agctaatttt atcacttgca gcagtttgtt tatcaacaat
     5521 cgtaacttca aaacgaccat cagcatattt agccaaatca gtcattttcc cttcgccttt
     5581 tttaccgtaa gaatagtcga aaccagctac cacatgctgt acatgcaaag cgactaaata
     5641 attatccaca aaggcttgcg gagatagctc ggaaaactgt gttgtaaagc gaactacata
     5701 cataatatct acgccaagtt cagccatttt ttccgcttta tcttcaagtg gtgtgaggta
     5761 tttcacttgt ttgcggatat tacttaaaac aacggatggg tgcggatcaa aagttaatac
     5821 tgctgtttga aggccttttt tttcagcaat ttgtttcgct tttttaatga cagcttgatg
     5881 acctaaatgc acgccatcga aaaagccaag tgccattact ttgtttatgt cagtccactc
     5941 gtccgttgta atcggatgat gtaagtaaat cgtcttcatt tttgccactt ctcctctaaa
     6001 ttcgaattcc tctcatatca taatataaga aagctatagt cgcaataact atgcttgatg
     6061 taactcgatg actttttctg gtttccaaag ttcatttttc tctggatgag gtttgtaaat
     6121 tgctgttaat ttatcattga agataagtgc ggcacgaggc tcattctcta cctctataaa
     6181 taatgatttt ggtaaaaggc cgccatttaa aactttcgca tggatttctt catcaatcac
     6241 taatttggcc atggattcaa tgcctttttc aagtggatat aaaaagctgc tatcactcgc
     6301 ttgcatcatt tcgtcaattt ctgccagtgt taagcaatct tcttttttga aaaagccgct
     6361 acgagtccgt tctagtttgg acatgtgcgc tggatatcct aataattcac caatcataac
     6421 tgcaagtgtg cgaatataag taccttttcc acaagatatt tctaactgaa aagtcggatt
     6481 cgcttcattt agcgtagcct cgccatctaa gcgagttaac gaataaatat ccacttgcct
     6541 ggatgggcgt tccacctcta taccagctct tgcatattca tacaatttct tgccattgac
     6601 ttttacagca gaaaacatag ggggaatttg agtaattttt ccagtcaatt tagtgagcgc
     6661 ggcttgaagt tcatcagcgg aaatgtctgc taattccttg gtcataaccg tttcaccagt
     6721 cgcatcttcc gttgtagtcg atttgcctaa agttatttct gctacgtaga cttttccttc
     6781 atctgttacg tattctgcta gtttcgtcgc acggccgata caaattggaa gtacaccctc
     6841 tacttctgga tccagcgtgc cagtgtgtcc aacttttttc gtatgtaaaa tctttcttaa
     6901 tttaaaaacg caatcatgac ttgtcatccc gcgttctttc cacagtggga taatgccgtt
     6961 catcaagctc ctccttttaa gaaaaaaagt ttaagacaat tcccacttat atcccgtttg
     7021 aatgagaaga taaagggact gccttaaact tttatttatt attgatcgtt atttaagtcg
     7081 cgaagcaatt catcgattcg atttccgtaa gcgatggaat tatctatttc aaaagacatt
     7141 tctggaactt tacgaagtcg aatacggcaa ccgatttcag agcggataaa gccatgcgct
     7201 ttcgcaagtg cgagtaacgt attttctttt tccttatctg taccaagaat ggaaatgaac
     7261 accttagctt cttgtaaatc accagtaaca tcaactcctg ttacagtaac aaaacctaag
     7321 cgcgggtctt taattttacg atttaaaata tcgcccaatt cttttttcat ttgctcactg
     7381 acacgatttg ctcgaacgtt caagtgtatt cacctctttt tataacttct ccataactgt
     7441 ctcggcgcgt tcccactcag gaaaagaatc aagaaaagca agtacttctc tggcttcttt
     7501 ttctgcttgg atgtgcgagg aagatacgat agcaaagcta atttccgctc gctgccataa
     7561 atcctgataa tccgtttcag caatggagat attgaatttt tgttttgctc tcgttactat
     7621 tcgtttcagg atagctcgtt tttctttgag gttttgcggt tcctgcatga aaaattcact
     7681 aacgactgat tgaatcattt tctttcaatt tcttccataa cgtacgcttc aatgacatca
     7741 tcttctttga tatcgttgaa gttttgtact gtgataccac attcgtatcc ttttgcaact
     7801 tctttcgcat catctttaaa gcgtttaagt gtagcaattt cgccttcaaa gacaacaatt
     7861 ccgtcacgga taatacgaac gccactatca cgagtaattt taccatctgt tacgtaacag
     7921 ccggcaattg tacccacttt ggaaacattg attgtttgac gaacttgcgc ttgaccaata
     7981 attttttctt ggaattctgg atcaagcatc cctttcatcg ctgcttcaat ttcatcaatg
     8041 gctttataga taacacggtg taaacgaatg tctacacttt cgttttctgc tgcttcacga
     8101 gcttgagcgg ttggacgaac attaaatcca ataacaattg cattagaagc tgcagcaagt
     8161 gtgatatctg attcattgat agcaccaaca gcagtatgaa taattttaac gttaacaccc
     8221 tctacatcaa ttttgcgaag agatgcagca agagcctcta cagaaccttg aacgtctgct
     8281 ttaataataa cgttaacttc tttcatttcg ccagctttca tatgttcaaa taagttgtct
     8341 aaacttacgc ggttggttgc agaacgttgc gctactaacg cacggcttgc acgagtttca
     8401 ccgatgtttc ttgctgtttt ttcatcttca aaaacaacaa agcgatcgcc ggcttgtggt
     8461 acatcattta atccagtgat ttcaactggt gtacttggac caactttttt cacgcgacgg
     8521 cctaaatcat tgaccattgc acgaacacga ccaaacgtgt taccaacaac aattgggtct
     8581 ccaatattaa gcgttccatc ttgtactagt agagtcgcaa ctggaccgcg gcctttatca
     8641 agttctgctt cgataacaga accgatagca cgacgatctg gatttgcttt taattcttct
     8701 acttcagaaa caagtaaaat catatctaac aagttttcaa gaccttcacc gaatttagct
     8761 gagattggcg cgaaaattgt atcgccaccc catgcttcag gaactaattc atattctgtt
     8821 agttcttgca ttacgcggtc agggtttgct tgtggtttat caattttgtt gacagcaaca
     8881 ataattggca ttcccgcagc ttttgcgtgg ttgattgctt caattgtttg tggcataaca
     8941 ccatcatctg ctgctacaac taaaatcgta atatccgtga tttgcgcacc acgagcacgc
     9001 attgcagtaa aggcagcatg tcccggtgta tcaaggaaag tgattttttt gtcatggatt
     9061 tcaagttggt aagcaccgat atgttgggtg ataccaccag cttctcctaa agtaactttt
     9121 gtattacgaa gggaatctag taatgttgtt ttaccatggt caacgtgtcc cataatagta
     9181 acaactggtg ggcgttcaac aagtttagac tcgtcaaccg cttcatttag ttcattttca
     9241 aagtacacat ctaaatctgt tacatcgact ttaatttctt cttctacttg tacaccgtag
     9301 tcgtcacaaa ttagttcgat tgcatcttta tctaatgatt ggttaatcgt tgcaacaaca
     9361 ccaagcataa atagtttttt gattagttca gatggttctc tgtataattt tttcgctaat
     9421 tccgctactg ttagagattc gctgaacaca attttttcag gaagttcttt tggttttggc
     9481 ggagttggcg gtactgtact gtggtttagc ttccctttct tcttcgtgtt acgaccttta
     9541 ttattaaaat tgccgccacg attcgggcga ttgttaccgc ctggacggtt tggattgccg
     9601 ccgcctggac gattgctgtt gttattgttg ttgcgttttt gtccgccagc ttgttgttgg
     9661 ttaccacttg attgtgtttg tttacttgtg tttgctggtt tgtttgtcgc tggttttgca
     9721 ccttggcttt tgtttgcagt tgctggttta ttagcttgcc ctgctgggtt atttggttta
     9781 ttcgactttt cattactatt tgtcatattt ggtttgtttg gccccttact atttccattt
     9841 tcgttgctag tagtttcttt ctttggtgct tcggcttttt tatttgtgcc atcaatggca
     9901 ttatctaatt gtcttaatgc attttcatta atcgtggaca tgtgatttgc cacttcaata
     9961 cctaagtctt ttaatgcttc aatgactttt ttgcttgata cttgatgttc ttttgcgtat
    10021 tcatatacac gaactttact catgtcgtac acctccgtat aagattcaac cgagtaattc
    10081 tgctaattta acagcaaatc ctttatcaag tatggcaact attgcacgtg tgtctttgcc
    10141 gattgcaccc cctatcattt cccgggtacc ggcttttttc acgacaacat tgtagtattc
    10201 acacttgttg cggattgttt tctcggtttt ttcggatata tcttctgaaa tgagaaccat
    10261 ttttgctttc ccatttctaa ctgcttttag tactaattct tcaccagtgg taattttacg
    10321 tgctcggtta gcgaggccta ataaggaaag tgctttttta tccattcgtt ggttcctcga
    10381 gagacttcac ataagtaatt aactcatcat aaaaggactc ttgttccggc atttttagtt
    10441 gatgaaaaat ggcgtttttc tttttcgctt tttcgcatac ttctacactt ttaataatgt
    10501 agaaaccgcg tccaggtgct ttgcctgtag gatctatcgt aagcgctccg tctttcgaat
    10561 acgcaatacg aagaagttcg ccttttggca agcgttcacc ggtaataata cattttcgaa
    10621 gggggatttt tttattacgc atgataattc tcctttttac tcttcatctt ctgtataagt
    10681 ttcgctctct gcatcttcca cttctggcgc ttctacgtca ttacgaggat agatgcctag
    10741 ttcagttgca actgtttcac ttttaatatc aattttccaa ccagttagtt ttgctgctaa
    10801 acgggcattt tgaccacgtt taccaattgc tagtgataac tgatagtctg gtacgattac
    10861 cgttgttgct tggtctgctt cgttcacaat aacatctaac actttggaag ggctaagtgc
    10921 attggctacg aatgtgaaag gatcttctga ccattcaacg atatcgattt tttcgccttt
    10981 aagttcattg acgatcgttt ggacacgtgc gccttttggt cctacacatg cgccaactgg
    11041 atctacttct tcatttgcag tgtaaacaga gattttagaa cgatctcctg cttcgcgtgc
    11101 aacagacttg atttctacaa cgccgtcata gatttcaggt acttccattt caaaaagacg
    11161 tttcagtaag ccagggtgtg tacgggatac aaaaatttgc ggcccttttg tcgtcttttc
    11221 tacttttgtt aaatatactt tgatgcggtc atgtgcatga taagtttcgt ttggcatttg
    11281 ctcgttttgg gacaaaattg cttcgatttt accaaggttt acatagataa aacgagaatc
    11341 ttgacgctca acaataccag tcataatatc atcttcgcga tcgataaatt catcgtaaat
    11401 gatgccacgt tccgcttcac gaacacgttg ggttacaact tgtttcgctg tttgagctgc
    11461 gatacgtcca aaatcttttg gtgttacttc aagctccact acgtcacctg gtttgtatac
    11521 tggattcagt ttgtgtgctt cttccataga gatttcaagg cgagaatcaa atacttgttc
    11581 tactgcttct tttctagcta aaacacggat agaaccattt tccatattta aatctacacg
    11641 tacgttttgt gcatctttga agtttctttt atatgcagaa gtaagagcag cttcaattgc
    11701 ttctactaaa acctctcttg aaataccttt atcatgttct aacacatgaa gagcatctaa
    11761 taattctgtg ctcatttttt attcagctcc ttattctttg ctttttaaaa ttgaattgcg
    11821 agtcttgctt tggctacttt gtctttagga atttcacaag tgattttgcg tgttttgtcc
    11881 gtgatagtaa taacgagtgt tgtcccgtca taactaacaa gcgttccttc ccacatttta
    11941 cggccatcaa ttggttcata tgaagtaacg tgaacatatt tacttaccgc attttcaaaa
    12001 tcttgctctt tcttcagtgg acgttcagcc ccaggagaag atacttctaa aaagtagttt
    12061 tgtgtaatgg ggtcattttc gtccattttt tcactaactt tttcgctcac ggctgcgcat
    12121 tcatcgatat ctacgccacc atctttgtca ataaaaattc gtaaaaacca atttggacct
    12181 tctttttcaa aggcaatatc tacgagttct agttgaagtt catccgtgat tggtgtaaca
    12241 attgcttcta cttgttctag tactttactc atttcagcct ccttaagaga tacgcttttc
    12301 cagctaattc gtcccctact tctgccacag gtgactcttt gacagatttg caaaacgaaa
    12361 gcgtgggcat tggcccacgc ttggctgagt tatcgtagta tttcttaaat aagtttatca
    12421 caaattgtga ctacaagcaa gttttgccct tttttagaat agtgacaact gattttgatc
    12481 aggcaatcct tccaagcatc cttgatcatc catgtactga atgattgttt tggatacttt
    12541 tccgcgctgt tgtaagtctt ctttcgacaa aaactctcca ttttcacgag cggcaactat
    12601 ttgttttgct acattggttc caagacttgg aatcgcattg aatggcggaa taagtgagtc
    12661 tccgtcaata atgaactcat cagcagacga tttatacaaa tcaacttttt ggaaatggaa
    12721 tcctcgagct agcatttcat tcgcaatttc taaaacggtt aataagtttt tctctttcgt
    12781 tgaagcttcc atccctttat catttacttc tttcatggtt gctttcacgg cttcttttcc
    12841 gtttaccatc gatgttaaat cgaaatcatc ggcacgaacg gtgaaataag ttgcataaaa
    12901 atatagtgga taatgtactt tgaaataagc aatccggact gccattaaaa cgtaagcggc
    12961 agcatgggct ttggggaaca tgtatttgat ttttttacaa gattcaatgt accaaagtgg
    13021 cactttattc gccatcattg cttcttccat ttcttccgtt aagcctttcc ctttacgcac
    13081 agactccatg atcttaaagg ctaatgaact ttctagccct tgataaatta ggaaaaccat
    13141 aatatcatca cgacaaccaa ttacatctgg cagttcgcat gttttgtttt tgattaattc
    13201 ttccgcattt ccaagccaaa cgtccgtccc gtgggaaaga ccagagattt gtactagctc
    13261 agaaaatgtt gttggtttag tttgttctag catttgtctt acaaaacgcg tcccaaattc
    13321 agggattcct aatgttcctg tttttgaatc aatatctgca ggcttaacac caagtgactc
    13381 tgtagaccca aatagtttca tgacatctgg atcatcggtt ggaatcgttt ttggatcgat
    13441 accgcttaaa tcctgtaaca tccggatagc agtcggatca tcgtgtccaa gtatatctaa
    13501 ttttaatacg ttatcatgaa tcgaatggaa gtcaaaatgg gtcgttttcc attctgagtc
    13561 cgtcgcatca gctgggaact gcaccggtgt aaaatcgtaa acatccatat aatctggaat
    13621 aacgataata ccacctggat gttgcccggt agttcgttta acgcctgtac acccagcgac
    13681 gagtcgatca atttctgccc cgcgaatagt catattcata tcgcgttcat aatttcgaac
    13741 ataaccaaaa gcggttttct ctgcaacggt accaatcgtc cccgcacgga aaacgtaatc
    13801 ctcaccaaaa atttcttttg tataagcatg ggctaccggt tgataatccc ctgagaagtt
    13861 caagtcaata tcgggtactt tatccccttt aaatcctaag aaagtttcga aaggaatatc
    13921 ttggccttct ttttgataag gggttccgca gtgcgggcaa tctttatccg gtaagtcaaa
    13981 accagaacca accgaaccat catcaaagaa ctcagaatcc ttacaattcg ggcaaagata
    14041 atgtggtgga agtgggttta cttcggtaat ttccgtcatt gtagcaacga aagaagaacc
    14101 aaccgatccc cgcgaaccaa ccagatagcc atctacaagt gatttcttaa caagcttatg
    14161 tgaaatgaga taaataactg cgaaaccatg gccgataata cttttcagct ctttttctag
    14221 tctagcttcc acgatttctg gcagtttctc accataaagt tgatgtgcca tcgcataact
    14281 catatttcga acttcgtctt ctgcaccatc aatttttggt gtatataatt cgtctttgat
    14341 tggtttaagg tcttccatcc aatcaacgac taaattcgca ttagttacaa caatttcttt
    14401 tgctttttct tcaccaagga aggcaaattc tttcaacatt tcatccgttg tacggaaatg
    14461 aacatcaggt aattcagccc gattaagcgg atttgctcct ccttgcgaat ggattaaaat
    14521 tttacgataa attttatcca ctggatcttt gtaatgtaca ttacctgttg caacgacagg
    14581 ttttccagtt ttctcaccga cgcggacgat atttttcaat atttcttcta aagctttttc
    14641 gtcacgaact agttcacgtt caataagcgg tgcataaact ggcttcggtt gaacttcaat
    14701 gaaatcatag aactccgcta ctttttctgc agcttgcatc cctttttgca tcattgcttc
    14761 aaataattct ccttggctac aagcagttcc aataattaag ccttcgcgta atttttttag
    14821 ctgcgagcga ggaatacgtg gtacccggta aaagtaatta atattggaca tcgtaattaa
    14881 tttaaagaga ttcttcaaac caacagccgt ttgtgcgtaa attgtggcgt ggaatggtcg
    14941 cgcgcgcttg tatgcgtcgc cttctcccat atagtcattt aaagaatcgt gaaaatcgat
    15001 gttgtgcatt tctttcgcat ctttaattaa cttccaagcc aaatacgctg tagcttccgc
    15061 atcaaaaaca gcccggtgat gttgttcaag aataatattg aatttctttg tcaaagtatt
    15121 caagcggtga tttttaaaat gtgggtaaag aaaacgtgct aattctaatg tatcgacaac
    15181 cgcattttct gctttttcta gtccaacttt ttcataagca gtgttaataa aacccatgtc
    15241 aaaagaagca ttatgggcca caagaatatc atcaccgctc cattctttaa atctttttaa
    15301 aacaacatca attggatcag aaccttttac catgtcatct gtaataccag ttaaattaat
    15361 agtggttgca gaaagcgggt gtccaggatc aataaaagct tcaaatttat caataatttc
    15421 accatttttc atttttacgc cagcaagttc gataatcgta tcataaacgg cggataaacc
    15481 tgttgtttca acgtcaaata cgcaatatgt tgcatcttcc aaagcaatat gttgatcgtt
    15541 ataagcgatt ggcacaccat catctataag atttgcttcg atgccaaaaa taacctttaa
    15601 gccatacttt tgccctgctc catacgcttc tgggaaagat tgggcaacag agtgatcagt
    15661 aatagcaatc gctttatgtc cccaatcagc agcttgtttg aacagtgaat caacagatga
    15721 agtggcatcc atttgactca ttggagaatg aagatgtagt tctgcgcgtt tttcttcagc
    15781 agtatcaaga cgcttcactc cagcgatttc attgacatct tgcgccatca tgattaagtc
    15841 ccgcacgaaa gtatcgtttt gaacgcttcc tctaacttta acccacatac cttttttcaa
    15901 attctggaac atcgccgcat cctcgttatc acgagaaaac atttttataa tcattgaact
    15961 tgtataatca gtaattttga attgtaacaa actacgacca ctgcgaagct ctctaatttc
    16021 tgtcgcgaag attaagcctt gaacggtaat acgtcgttcc tcatcataaa tgtccccaag
    16081 acgtttaact tcttcatcgt ctttaatttt ataaccaatt tggaacggac cagttagtgg
    16141 agcagctcca ccgccaccgc tttgcccttc tgcttgtcgt ttttgcataa cttgcacagc
    16201 ttcagcggct tttttctgat cttcttcttg tttggccagt gcaaaagctt tatattcctc
    16261 tgtttcagac tggtcaagca agtgcatttt catggcaagg cgtggaaatc cagctttccc
    16321 gtaactttca ataattttcg tctggaatcg ttgctgaata gtcgcttctt ccatgtcatt
    16381 atgaaccgct acttcaataa aatgaggttc tttaaatgta ggtttttgct ccattaaaag
    16441 ctttccaatc atcggtgact gcttcccaat tggctctacg attaagttcc aataatcctg
    16501 aatgagtgtt tcgtcaattg tttgattttc tggaacaatt tgcatttctg tttccgcaat
    16561 ttggctgaac gcacgcttca ttccaacatc catcatatgg aaaagtgctg ctggaaaaat
    16621 ttgtggaacg tgtaaatgaa attgccatgt tttatttttc ttgtcggcaa cgagtttttc
    16681 gattttagca tcttttgtaa attcttcgta agttgttaca tcttgtaaac cgatttgtgt
    16741 cattaacagc tgaaatcgtt cttgtttttc ttcctctttt gcagtcattc cgaataacac
    16801 cccttcattt aaatttataa aagccagatg tccctcataa cccgttttta taggaacgag
    16861 tgaagtttca tctggcacga attgctcaat aaattattta tctccaaaga gtataggcag
    16921 cgtgtttagt aactcatctt gacgaacttc aatcatttcg ccagtttttc tgattttcac
    16981 ttcaactacg ccttctgctg cttttttacc tactgtaata cgaattggta agccaattaa
    17041 atctgcatca gcaaatttaa ctccagcacg ctctgcacga tcatcgatta acacactgaa
    17101 cccagcatct tgtaaagagc tataaagtgt ttcggcaaaa gcaacttgct cttcgctctt
    17161 catattaacg ggaattaaat gtaaatcaaa tgggctaatt tgtttatccc aaacaaaacc
    17221 attttcatca tttgattgtt cagcaatggc agataaaata cgtgatacgc caattccgta
    17281 acaacccata ataattggct gtgctcgacc attttcatct aaaatagttg cattcattgc
    17341 ttcactatac ttcgttccaa gtttgaaaat atgcccaact tcgatgcctt cagcaaactt
    17401 gattacgcct tgaccatctg gagataaatc accaacttga atcatccgta aatcaaaata
    17461 gctagtaacg gagaaatcgc gatctggatt cacgttaata taatggaaac catcttcgtt
    17521 tgcaccaact accgcattaa cgatatcttt cacagcatta tctgcaaaga cgcgcgtgtt
    17581 ttcaggaaca ttgattggtc ctagggaacc aaaattagct cctaatagtt caacagcaac
    17641 agctggatcc actaattcta cattggttgc atctaatgca tttttgattt taatatcatt
    17701 tacttcatgg tcaccgcgaa cgagaaccat tatgacttca tcatcgactt gataaagcat
    17761 cgatttcatt gttttttcaa ttggtacttc taaaaactca acgatatcag caatcgattt
    17821 ttgatcagga gtcgcaactt tctccatatc tttttctagt tcatgcgatt ttttctccat
    17881 atataaaact ggagccattt ctgtgttggc agcataatcg gaagcatcgc tataagcaat
    17941 tgtatcctcg ccaatatcag ataatgccat aaattctttt gattcattcc caccgataga
    18001 accagaatcc gcaataacag aacggaactc aagaccacat ctagtgaaga tattcgaata
    18061 agcttggtgc attaagttat acacttcatc caaactttca ctggttgcgt ggaaagaata
    18121 ggcatctttc attatgaatt cgcgaccacg taatagaccg aagcgtggac gtttttcatc
    18181 ccggaactta gtttgaattt ggtataaagt aagcggcaaa cgtttgtaag atttaacttc
    18241 atcgcgtaaa agtgcagtta taacttcttc atgggttggc ccaagcgcaa agtcgcgaga
    18301 agcgcggtct tttaggcgca ttaattctgg gccgtaatcg ttccaacgac cagattcctg
    18361 ccaaagttcc gcaggctgaa gcgcaggcat taacagttct gcagcgccaa ttgcttctag
    18421 ctcttcacga ataattgttt cgatttttcg taacatcaat gttgcaagtg gtaaataact
    18481 ataaatccca ctagctgttt gtcttataaa accagcacga agaagtaatt ggtgactctt
    18541 tacttctgca tccgctggta cttcttttaa tgttggtata aatgtcatcg tttgacgcat
    18601 ttaaaacacc cctttttccc tttattagtc tatctctttt ttagaaaaat gcacgttgaa
    18661 tatcgttcca tgtcacaaga atcatcagaa ccattaaaag tgcaaatcca gcaaaatgga
    18721 taatgccttc ttttttaggg tcaattggtt tgccgcgaac gagttcgtat aagaagaaca
    18781 ttaaacgtcc gccatctagt gctggtaacg gtagtaagtt aacaattcct aagttaatac
    18841 ttaaaacagc cgtccagttt agtacagtca taaagccata ttgaacgact tgttgcgtac
    18901 ttgtgtaaat ccctactggg ccatttagca tatcgagcga aaatccgcca gtaaacatgt
    18961 ttcctagaat cgtaaatatt tgtacaatcc aattccatgt ttgcgtaaat ccattcgtaa
    19021 ttttagcagt aaaagaggag tccattggtg tctctacacc gatttttcct acgtctttgc
    19081 cattttcttt ttgtgttgcg ggtttgacat cgatatcttg tgtcttgcca tctcgctcaa
    19141 ttttgaagtc aagtgttttt ccggggtttt ccgaaacact ttgaacaata tcggtccaag
    19201 atttcgtttc ttttccattg atggaaagaa cctcatcccc tttttttaga ccagcttcag
    19261 cagcagcccc gtccggtaga acattcccaa gcgtattatc ggtgcttgga acgccccctt
    19321 gtacaaaagc aagtgctgtg aaaattaaaa tagctaaaat aaagttaaaa agcggtccag
    19381 caaaaatggt cattgcccgg tttcctaatg atttagcatt aaaagaacgg tcatatggcg
    19441 taatcatcgt ttcgatttta ccatcaatca ctaaggcatc acgctctacc tgatagcgaa
    19501 ctttcttggt gtcatcgtaa tcttcgtagc cttcaatgaa aagttctttc tctaaatcac
    19561 agagagaaac ttctattggc tgcgcgttta catattgatc tttaccatta acaatgattt
    19621 tgctaaccgt ttcttccgga gttaattcta gccctactcg gtaaccaggt tttagctcga
    19681 tttcctcgcc atcttcccca gccatccgaa cgtaaccacc aatcggcaat aagcgaatcg
    19741 tatattgcgt ttctttttta cgataagcaa aaattttcgg tccaaaacca attgaaaagt
    19801 cttttaccat aattccagca cgttttgcaa aaagaaaatg tcctagttca tggaaaaata
    19861 caatcagtcc gaatacgaaa ataaaagcaa taatagttgt caaaatagct tcacctctat
    19921 aaaagtgtct ttacatacgc gcgtgtttct tgatcgactt gtaaaatggt atccaagtca
    19981 gggtcagaaa tgctagtatg acgattcatt gcattctcaa caagtgcttc aatattataa
    20041 aaagccacct gtccatttaa aaagccagcc acagcaattt catttgccgc atttaaaact
    20101 gtcggcattg ttccacctat tttaccagca ttatacgcga gtttcaatgc cggaaatctt
    20161 tcataatcca ctttttcaaa atgaagtgcg gaaaaatcag taatccggaa ttctttttca
    20221 tacggtatat aaagtctgtc gggataggtt aaagcgtatt gaattggcat ccgcatatct
    20281 ggtgtaccaa gttgcgcaat gaaacttcca tccacgaact gaaccataga atggataata
    20341 ctttcgcgct gtataacgac ttctatatca tcgtagtcca caccaaacag ccagtgcgcc
    20401 tccatcactt ctaaaccctt gttaaacatc gtcgctgaat caattgttaa tttattcccc
    20461 atattccagt tcggatgttt taacgcttct ttcaccgtaa cctcgctgag ttgttccctc
    20521 gtcttatctc ggaaacttcc accgctcgct gtcaaaacta gtttttcgat tctttccgta
    20581 ttttctccgt ttaatgcttg taaaatagca gaatgttcgc tatcaacagg taatagtgaa
    20641 atgttttttt ctttcgccgc acgcatgact aaatgtccag ccgtaacaag cgtttcttta
    20701 ttagcaattg caatggcctt cccagcttcg attgcatcta atgtcggaag taagccaacg
    20761 ctccccataa ctgcatttaa aagcacatct ccatctaaat aggtcgctac ttctctaagc
    20821 ccttctaaac cattaaaaaa tttcacgttt gggaattctg cttctaatat cacacgatct
    20881 ctcgtatgcc aaacagcgac cattttgggt ttaaattctt ttataatcgc cctaccacgt
    20941 tccatattac gcccaaaact aagcgcaaca atttgaaatt tttcagggtt ttcgcgaatg
    21001 attgcaagcg tttgtgttcc aatagaacca gttgcaccta gcaaaataat ttttttcatt
    21061 atcccatctc caattaaata atttgaagta tatgtagcag aggtaaaacg aacaacaagc
    21121 tatcaaagcg gtctaaaata ccaccatgcc ctggtaagat tttcccagaa tcttttacac
    21181 cataaaagcg tttcaaagca gattcgacca agtctcccaa ctgtccaaaa atagaaagaa
    21241 aaactaaaag cgctagtacg agtgcaatat ttcctggtag ctcagcaaaa taataaaagc
    21301 ccccagcaat gacaagtgca catacaatcc cgccgataaa cccttccacc gttttgtttg
    21361 ggctaacatt cggagctaat ttgtgttttc caatcgcttt tccaataaaa taagcccctg
    21421 tatcagttga ccaaacaata aataaagcaa aaagtacata cattaaccca gcttcacgag
    21481 ttaatgccaa gtaatggaaa ccaaatcctg tataaaaagc ggcaaccata caaataccaa
    21541 cttgatcaaa atggaattta tttcgtgaaa atacagtatt agcgagtaat aaagccatta
    21601 aaataaaaat aacttccatt tcagtaatat gcagtgtatc taaaaagtcc aaatatctat
    21661 ctggcacgac aactaaccac attaatagta aagtaattat cccattcatc gaaaaaattc
    21721 gttgttttgt cattacaagt acttcatata aagcaatcgt tgctagtaaa atacttaata
    21781 gttcaaatgg aattcctccg tagacaacga atggaataaa aaatataagc gcaacaactg
    21841 cagtaataat tctcgttttc aatctttttt cctccctaga gccctccaaa acgacgtgac
    21901 cggttttgat attcaataat tgcctgtaaa aaatcttctt ttgaaaaatc aggccaatgt
    21961 gtatccgtaa aataaaactc actatacgcc agttgccaaa gcataaaatt acttaatcta
    22021 agctccccac tcgtccgaat caacaagtca ggatcaccca aaccgctact catcaaatga
    22081 tcatttaatt tttcttctgt cagatcatct gcacttttcc ctttaagctc taattctttc
    22141 atcgcttctt tggcagcagt aataatttct gaacgtccac cgtagttaag tgcaaagtta
    22201 agcgtaagcc ctgtgcaatg cgctgtatca gctatggctt tctctacggc acgcatcgta
    22261 tgattaggta aattttctct gtaccccatc acattaacac gaacattttc ttcaatcaac
    22321 tctggtacaa aagagtcaaa aaattctaca ggaagtttca ttaaaaaatc cacttcatct
    22381 gtaggtctct tccaattttc agttgaaaat gcataaagcg ttaaaacatc gatgccaatt
    22441 gcattagcat aacgtgtcac tcgctttacg acatccatac cttctttatg cccagcaatg
    22501 cgcggcaaaa aacgtttctt cgcccacctt ccattcccat ccatgataat agctacatgg
    22561 cgcgggatag gcaaatcttc tgcaagttca ctatttaata tattttcatc ttgtcgaaat
    22621 agctttttaa
//
LOCUS       DASDYO010000035        22388 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.035, whole genome shotgun sequence.
ACCESSION   DASDYO010000035 DASDYO010000000
VERSION     DASDYO010000035.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 22388)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 22388)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..22388
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.035"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            147..1391
                     /locus_tag="U0290_001154"
     CDS             147..1391
                     /locus_tag="U0290_001154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter substrate-binding protein"
                     /protein_id="HEM2301199.1"
                     /translation="MKKKMFVVLALVLSLSLVLMACGGSKDDANSGDSKVLNVWAMGD
                     EAKSLKELAQKFTKDTGIEVKVQVIPWANAHDKLLTAVASKSGPDVVQMGTTWMPEFV
                     EAGALLDITKDVEKSKNMNSDLFFPGSVKTTQFDGKTYGVPWYAETRVLFYRTDLLKK
                     VGYNEAPKTWDELSDAALKLSKRGKDMYGFAIDPNEQTTGFIFGRQNGSPLFDKDGQP
                     VFNKKPFVDTVSYLDSFIKNGSAPDTDLGLDASQSFGGDGIVPMFMSGPWMVNTLKDT
                     APDIDGKWATAVLPKKENNESSLGGANLSIFKYSDKKDDALKFMDYMSQPDVQLSWLK
                     DTNSMPARMDAWEDDMLKNDPYYKVFGEQMKTAEPMPLIPQFEEIAQLYGKSWEQIYR
                     GGADVQTQMDTFNDQVEALLKK"
     gene            1452..2345
                     /locus_tag="U0290_001155"
     CDS             1452..2345
                     /locus_tag="U0290_001155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2301200.1"
                     /translation="MKQFLNKNTPYLFISPALFLLLLFSLLPILLAFVISFTDIDLVG
                     LADYSKINFVGVDNYVNIMQDPVFLKSIFNTLFYVIIGVPLVIVCSLGIALMINFSQA
                     KIFQFFRLIFYTPSITNVVAVAVVWSYLYNPRFGLLNYLLSFLDLGPVPWLQDPTIAK
                     LSLIILAVWRAIGVNMIIFLAALQGIPREYYEAASLDGANSRQQLFKITVPMLRFAIF
                     FVTVTTMIGWLQFFEEPFVMTEGGPLDSTNSVALFIYQNGFQLSKFGYAAAGSFILFI
                     AIIIITIIQFRIQRKNNDGDI"
     gene            2363..3193
                     /locus_tag="U0290_001156"
     CDS             2363..3193
                     /locus_tag="U0290_001156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2301201.1"
                     /translation="MNQYRQKSRGAQIAVITILTVGGFFMILPFIWMVLSSLKTDAEI
                     LKIPPTIWPETFTLDNFTKLFTEMDFAIYLKNTLIIVFFSFFGLFLNAMAGYGFAKFK
                     FKGKNKLFYLVLATMMIPGQVTMIPVYLLLNAAGLTNTMTGIVLPGLVGAFGIFLFRQ
                     FMSTISDDLLEAARLDGASEFYIFWRIVIPISRPVLAVQGILTFIAGWNSFLWPLIIA
                     NDEKFYTLSVGLQLLKGQYGSNYALQMAGATFMVIPIILIFMTFQKYILKGFNVSGMK
                     "
     gene            complement(3238..4707)
                     /locus_tag="U0290_001157"
     CDS             complement(3238..4707)
                     /locus_tag="U0290_001157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase subunit beta"
                     /protein_id="HEM2301202.1"
                     /translation="MGKATGFMEYDRIPSPGRDPKSRTRDWNEYSLPMPVADLTLQAA
                     RCMDCGVPFCSVGMEIKNGVSGCPLHNLIPEWNDAVYRGDWYEALQLLLKTNNFPEFT
                     GRICPAPCEGGCTVAISEPAVGIKSIEKAIIDRGFEEGWIKPAPPKKRTGKRIAVIGS
                     GPAGLACADQLNKAGHSVTVIEKSDRIGGLLMYGIPTMKLEKEQVTRRVNLMAEEGIE
                     FVTGVAAGTDVTFAELREEYDSIVLATGAGNARDIPLAGRDAVGIHFAVPYLSQSTRD
                     NLDNGGVQTLSAKGKNVVIIGGGDTGADCVATALRQGAKSIYQFGIQDKLPELRDGEN
                     PWPQYPRVFKMDYAHEEAEAVYGRDPREYLINTTSFEKDEAGNLIGLHTVEVEENKAE
                     RKYTPVEGSEKYFEVDMVLIAIGFAGTTEDIFTNFGVGKTERHTIDAAKGFYRTSEEG
                     VFACGDARHGQSLVVTAIAEGREAAREVDFYLMGETFLP"
     gene            complement(4722..9314)
                     /gene="gltB"
                     /locus_tag="U0290_001158"
     CDS             complement(4722..9314)
                     /gene="gltB"
                     /locus_tag="U0290_001158"
                     /EC_number="1.4.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate synthase large subunit"
                     /protein_id="HEM2301203.1"
                     /translation="MKQTNLPKKHGLYNPENEHDACGIGFVANIKKISSHKIVEQGIH
                     MLCQLKHRGGEVGGDTGDGAGILLEISDSFFRRECSKLGINLPEKYHYAVGMFNFPQN
                     KTERECLMAETEKLIASEGQTFLGWRKLPTDVTKVGAGARKTEPAIYQLFIQKNAKLD
                     EAGFERALYLIRKQIEKFAATSKQITETFYVPSLSTRTVIFKGMLLPEQINQYYLDLA
                     DPAYVSAFALVHSRFSTNTFPSWERAHPYRYLIHNGEINTQRGNVNWMKAREKRAESD
                     LLGEDLAKLLPIIDESGSDSATLDNALEFLVQAGRSLPHAAMMLIPEPWDKNPHMTDP
                     KRAFYEYHSTLMEPWDGPTSISFTNGRVIGTILDRNGLRPARYYETKDHTIIYSSETG
                     VVPVDSSEIIRKETVGAGTMLLIDLEEGRIVTDAELKEELTTEKPYREWLEAEMTEIA
                     DLATADLHYEAMDKSERFKKQRAFGYTQDELNKILIPMVTEKKDPMGAMGYDAPLAVL
                     SQRPQVLFNYFKQLFAQVTNPPIDGIREETVTSAMTLLGDEGNILNPTAQNANRIRLK
                     TPILSRKEFAALEQQTKFAQPTVTLPILFKAEERDGLEARLESLFVEADEKIAAGAEL
                     LILSDDGVNADWIGIPSLLAVSGLHHHLVKAGTRTQVSIVVKTAEARDVHQCALLIGY
                     GADAVFPSLAIDTFDGLIKEGRMKGFTLDEAESRYIEAITDGILKIMSKMGISTVQSY
                     RGAQIFEAIGIGDDVIKHYFPGTASQIGGIPLEVIAQEAWLRHREAYHDVGYQSFTLN
                     TGGEYQWRSNGEYHVYNPLAIHSLQQATRENDRETYNLYSDLMQNQNNAFLRGLLTFT
                     SDRKPIPLDEVEPAEAIFKRFKSGAMSYGSISQEAHEALAIAMNRIGGKSNSGEGGEN
                     PNRFTPDENGDWRRSAIKQIASGRFGVTSHYLVNAEELQIKMAQGAKPGEGGHLPGNK
                     VYPWISKTRGSTTGVGLISPPPHHDIYSIEDLSQLIFDLKNANQNARINVKLVSKTGI
                     GTIAAGVAKGNADVILVSGYEGGTGAAARTSIRHAGVPWEIGLAETHQTLLLNGLRNK
                     VVVETDGKLMTGKDVLVAAMLGAEEFGFATAPLVTLGCVMMRVCHLDTCPVGVATQNP
                     ELRKKFSGSADYVVNFFHFIVAEMREMMAELGFRSLTEIIGHKEFLTTHEKKEAHWKA
                     KYIDFSNMLYSDDFYKNQVQYCTKQQDHKIDQTLDMRELVPLIQPALENGEKVTGTFA
                     VRNVDRAIGTVAGSFISKKYGAEGLPEDTISLDFVGSAGQSFGAYTPLGMTLRIHGDA
                     NDYFGKGLSGGKLIVSPDAKTPIKPHDSAIVGNVTLYGATGGYAYVHGKAGARFAVRN
                     SGATAVVEGIGDNGCEYMTGGAVVVLGEIGENFAAGMSGGVAYLYTNNKQATTAKINH
                     ELVNSRSTLNTSELTKLKQLIEQHANLTGSNFAKDILQNWEAEKANFIFVIPNEYEMM
                     LTRITTLEQTGKTHDEAELQAFYEHKDGKLVAGVAK"
     gene            9507..10394
                     /locus_tag="U0290_001159"
     CDS             9507..10394
                     /locus_tag="U0290_001159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2301204.1"
                     /translation="MELRQLKYFMEVARVEHMTKASENLHVAQSAVSRQITKLEEELG
                     VHLFDRVGRNMQLTSVGQDFLKQAAIALNELQKAEALVTEYTDPAKGTVRVGLPNSLS
                     TKVLPSVISTFREKYPQITYQFMEGTNEELTEMLLSGVLDMTFLSPVPESSEQIEAIR
                     FFDEKLKLIVPKTHPLAENFTVSLKELASEKFVLYPEDFDLYKIVTKAANKKGFEPQI
                     AFQSRDFYTIQGLVGAGLGISILPEMILDGAIFKETKSIALRDKELRRSVGIITTKKR
                     NLSPSENLFRSFIISFFSN"
     gene            complement(10391..10909)
                     /locus_tag="U0290_001160"
     CDS             complement(10391..10909)
                     /locus_tag="U0290_001160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEM2301205.1"
                     /translation="MIIRKEQPQDYEAIRRVNEEAFKGTVEADLIESIRTSDYYQPGL
                     SLVAEAEDGLIVGYIMFSEISLEAAGRSRFILALAPLAVLPAYQGTRVGSRLMEEGIR
                     LSREKAYPAIAVLGHADYYPRFGFIPSEQFAIPAPFDVPAEYFMLLELYDGSLENLAG
                     TIHYPAAFSENN"
     gene            complement(10912..12018)
                     /locus_tag="U0290_001161"
     CDS             complement(10912..12018)
                     /locus_tag="U0290_001161"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase family
                     protein"
                     /protein_id="HEM2301206.1"
                     /translation="MLNKELIVRGAPQEYLCQVGAWDTLPTHLERRGLKNVLVVRGNA
                     SWEVAKKKFPVLSTVTSTFEVYNGGSTYEERDRLVAIMETNKMDAIIAVGGGKIADVC
                     KATAAVLRLPVIILPTLASTCAAYTPLSVMYDEEGAMIRYDVFASSNALLLIDPEMIL
                     DSPKELLVAGIGDTLAKWYEADVIINSLPTKSVEIEIAHFAAKMCRDNLLQYSEEALA
                     AMDKQVLNEAFVKIIETNILVGGMVGGFGDDYGRCAGAHSIHDALTMVPETHHLLHGN
                     KVAYGILVQLVIENRWDEIERLLPFYSELGLPMSLYDMGLATLAEETLVAVSKRATEP
                     HETIHMMPGEMTADVVLNAMKQLEDSMAMKRVAK"
     gene            complement(12110..12925)
                     /locus_tag="U0290_001162"
     CDS             complement(12110..12925)
                     /locus_tag="U0290_001162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2301207.1"
                     /translation="MKKGLLITVMLMVMLALGACSSGESKEDQWSRIKKDKEVVIGLD
                     DSFVPMGFRDKDDNLVGFDIDLAKAVFAEYGIKAKFTPIDWTMKESELKNGSIDLIWN
                     GYTVTDARKKQVAFSQPYMKNEQVLVTLKSSNINQFSDMKNKTLGAQNGASSIDDMAK
                     KTEVLTDIINNNEPELYDTFDTAFIDLNNKRIDGLIIDEVYARYYIDKQKNKDDYNII
                     TGGFDATDFAVGMRKSDKELQTKINEAFEKLYKEGKMQEISKKWFGDDEIAKQ"
     gene            complement(12927..13574)
                     /locus_tag="U0290_001163"
     CDS             complement(12927..13574)
                     /locus_tag="U0290_001163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465264.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM2301208.1"
                     /translation="MLEIKNLSKKFDQKTILDNVNISLQDGEILSIVGPSGGGKTTLL
                     RCISGLEKMDTGEIFIDEEKIDPMSRKDVENTIGVVFQEFHLFPHLSVLDNLILAPTL
                     ARKTKKADAVKEAERLLGLLDLADKANSMPYQLSGGQKQRVAIARALAMNPKVLLFDE
                     PTSALDPDLRDHVAALILSLKKVGITQIIVTHDHTFAEKVADQMMEVEPLKKEAI"
     gene            complement(13585..14226)
                     /locus_tag="U0290_001164"
     CDS             complement(13585..14226)
                     /locus_tag="U0290_001164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter permease"
                     /protein_id="HEM2301209.1"
                     /translation="MDYITEILPALLDGAKTTLLVFAVTLVCSIPLGAVVAVGNISKI
                     APLKFILNIYIWIMRGTPLLLQLIFIYYGLPIIGVVFDRMDAVFIAFILNYAAYFAEI
                     FRGGFLSIENGQYESAKVLGLTYGQTLQKIVLPQVVKRVLPAIGNEVINLVKDSSLVY
                     ILGIGDLLRAGKIAMSRDVTLIPLVLVAAIYLALTAILTILFKQLEKRFSYYK"
     misc_binding    complement(14284..14524)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(14624..15664)
                     /locus_tag="U0290_001165"
     CDS             complement(14624..15664)
                     /locus_tag="U0290_001165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM2301210.1"
                     /translation="MNWWSYIKDKRFFLLFFCSIMFFVGVLISIDPNSKLTLGNFIYL
                     YVFVLVFLLSYLVLGYFFKYNYWREMKELVSGEIEENIIELLPKPRTREQAFFNQLMA
                     KKHKEELRTISKLQDKQQEYHDFILYWVHEVKTPVVASKMLINNPDLNDTETIFKQID
                     EELTTIDKLVMQALYFSRLDTFSKDYFIQEQNLGVVVRESVKRHSKLFIGKKMKLDLQ
                     NVDMDVRTDSKWLGFILDQILSNALKYTKSSGEVKIWCDTEASEKKVLHIKDNGRGIK
                     EEDLPRVFEQGFTGNIGRQEKKATGMGLYLAKQMAKKLGHEICIQSESGVGTEVKIYF
                     EQKDDYLLIAKD"
     gene            complement(15686..17428)
                     /gene="ade"
                     /locus_tag="U0290_001166"
     CDS             complement(15686..17428)
                     /gene="ade"
                     /locus_tag="U0290_001166"
                     /EC_number="3.5.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine deaminase"
                     /protein_id="HEM2301211.1"
                     /translation="MVENLEQLQERVAVSDGRAKADLVIKNGRIINVFSGEIMDGDIA
                     IKNGYIAGIGNFPDAEKIIDAAGAFIAPGFIDAHVHVESAMVTPAEFARVLLPNGVTT
                     IVTDPHEIANVAGEKGIEFMLEDAKGVPIDMFVMLPSSVPATEGEHNGETLHAEKLHP
                     LYRHEKVIGLAEVMDFPSVAKGSSDILTKIIDAKKEGGRIDGHGAGLTSADLNNYLAV
                     GIRTDHESTTAKEATDRLRAGMFVMLREGTVGRDLLQTIPAVSEKNSHRFCFCTDDKL
                     INDLITEGSINYNIRLAIKNGIDPITAIQMATINAANCHNLPYLGAVAAGYQADIVFL
                     TDIETVEISKVLKNGEVVVDNGVRHEAAFKQQAAVPFVSPPINHHVSLQDLALPLTKE
                     TCYVIGMQPNSLFTEKRIEQVAIQDGKFVPTVENDLLKMAVVERHHDTGCVGLGIVKG
                     FGLTEGAIATTVAHDSHNIVAVGISDEAMKAAIDHITQTGGGIAVVNGAGQVLHDLAL
                     PIAGLLSDKSYEEVENDLAGLLNAFKQISTADGFDPFLTLSFLTLPVIPELKLTDQGL
                     FDFATFQIISNEVN"
     gene            complement(17445..17903)
                     /locus_tag="U0290_001167"
     CDS             complement(17445..17903)
                     /locus_tag="U0290_001167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301212.1"
                     /translation="MLNFEEKKALIESIDGFELHEISMGRINVHYPASKRDKKIIVKH
                     LHPNGNAFVYAPFLEVEPLDKQGYVNVKDYSENEIRVLLLEAKEFMDSDEDGYKEGLT
                     KIYQDNSGEKLSLVYENKMWVIFTGENLEAVFPTLESAEGYLLDEGFFEA"
     gene            complement(17924..18799)
                     /locus_tag="U0290_001168"
     CDS             complement(17924..18799)
                     /locus_tag="U0290_001168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2301213.1"
                     /translation="MKILVFGGTRFFGKKLVERLVSEGHEVTIGTRGKTEDNFGDTVK
                     RVILNRESRDALFQLAKEDWDVIYDNICFSPKEALYAVDAFKGKVKRYIYTSSLSVYS
                     QKGRALVEADFNPEHYEIVIGDKEDFDYGEGKRLAEAVFFQKASFPVVAVRFPIVLGL
                     DDYTKRLHFHINHIKNHQEIGISNGQAEIGFITSDEAAHFLEWVGVESDLTGPVNATS
                     NGTYALNGFIKMLEEKIGKLALVEEVTDDVDDSPFGIEKTYYLDNTKATEAGFVFNDL
                     KVWLPALVTAILKEN"
     gene            complement(18869..19546)
                     /gene="virR"
                     /locus_tag="U0290_001169"
     CDS             complement(18869..19546)
                     /gene="virR"
                     /locus_tag="U0290_001169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator VirR"
                     /protein_id="HEM2301214.1"
                     /translation="MVKVYIVEDDEVIRDTIRKHLSKWGFEIGVVEDFNNILQEFLAF
                     EPQLVILDVNLPFFDGFYWCNQIREVSNVPIIFLSSRNSRMDQIMGMNMGADYYIEKP
                     VDLDVLMARINALLRRTYSYADLEEANVMEHNNVFLHIDTNTLTHLEDKIELTKNEFL
                     ILYELMKQKGSIVSRDEIMRALWEDESFVDDNTLTVNVVRIRKKLAEIGLSEFIKTKK
                     GQGYMIE"
     gene            complement(19609..21588)
                     /gene="virA"
                     /locus_tag="U0290_001170"
     CDS             complement(19609..21588)
                     /gene="virA"
                     /locus_tag="U0290_001170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease VirA"
                     /protein_id="HEM2301215.1"
                     /translation="MLFKVALTNMRKNFNQYIVYFVSLIVCVLVFFTFVSLSYNPLID
                     TVFKRWELFGPAMFSSASLMLILFIIFFIFYSNGFFLKRRKREIGLYSLLGLRKSQIV
                     LVLFFENAMLYMLATIFGVLIGIFSSKLFAMVLFWIVGLAIDAEFIISFKAIIDTILV
                     FFGIMLFTSVYAVFLVLRYNLNQLFKNDDKEEKVAKGSLIFMLIGLALITFGYYLATR
                     NIEESPIWLAYDFFDLILVILACVILGTWLMVRFGTPYVIRQLYNNKRFFYKGTNMLG
                     ITSLRFRLKKNAGTIAMIAVLSATTLTIIGSMSSFYVRTINDISAENPSSYQVLNISA
                     KNEKEIIQTIRDDQDHKLKKLMQAEMLSAEVEYKDIPKYKMHMDTFIHTIVSESEYNR
                     IGERQQSDFVESKKIAYGDAILLGKNTYYARSDIQEKWLTRKMVVQSNKSVAKKMPPI
                     KVVDFRENSIFNTGISYETLVVSDEYYDDLERLFPPESVTMFDITNPNHSESLDKKVQ
                     TIVDGEPSLFSENVSSYYTNYHLISTVVGSLLFIGIFIGIVFFLATGSIIYFKLVTDA
                     VSEKAKFDILFKLGVTEKEIRKIISKQVWPIFVIPLFFGIAHSMAALWGISVNLMDNI
                     KYPVLIGTGIYILCYAAYYFLCINSFTKIVMANKK"
     gene            complement(21578..22345)
                     /gene="virB"
                     /locus_tag="U0290_001171"
     CDS             complement(21578..22345)
                     /gene="virB"
                     /locus_tag="U0290_001171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein VirB"
                     /protein_id="HEM2301216.1"
                     /translation="METVLKAHKVRKVYGSKGNLFSALGSISLEIQKGSFVGIMGPSG
                     AGKSTLLNVLSSIDKPTSGEIEIGGKQISTMNGKELAVFRRDQLGFIFQDYNLLDTMT
                     VKDNIVLPLALARIKQAEIDQRFEIIARQFGIFELRNKYPTEISGGQKQRTAVCRAMI
                     TEPTLIFADEPTGALDSKAATNLLEGLSQAKDVRDSTIMMVTHDAFAASYCERIMFIK
                     DGEIFTEIYRGTSSRKQFFQKVLDVLALLGGGENDVI"
BASE COUNT         6617 a         4870 c         3721 g         7180 t
ORIGIN      
        1 ttctatgaaa tattgtgtat gtgaattaat tttcacaatt tgcttcatcc cgtacggcgc
       61 actagttccg tgcaacagtt tttattcttt aacagctttt agttaatcaa gttgctttga
      121 aaaaaacaaa aaatggagga aaaatcatga agaaaaagat gtttgtcgtt ttagctttag
      181 tgttgtcgct tagtttagtg ttaatggcgt gtggtgggtc aaaggatgat gcaaattccg
      241 gcgattctaa agtattaaat gtttgggcaa tgggtgatga agccaagtca ctaaaagaac
      301 tcgcacaaaa attcacgaaa gatactggca ttgaagttaa agttcaagtt attccttggg
      361 caaatgcaca tgataaatta cttacagccg ttgcttctaa atctggcccc gatgtagtcc
      421 aaatgggaac tacttggatg cctgaatttg tcgaagctgg cgcactactt gatattacaa
      481 aagatgtcga aaaaagtaaa aatatgaatt ctgatctatt tttcccaggt tcagtaaaaa
      541 ctactcaatt tgacgggaaa acttacggtg ttccgtggta tgcagaaact cgcgtattat
      601 tctaccgtac cgatttactg aaaaaagttg gttataatga agctccaaaa acatgggatg
      661 aactatccga cgctgcactt aaactttcta aacgtggcaa agatatgtac ggctttgcca
      721 ttgatccaaa cgaacaaacg actggtttca ttttcggacg tcaaaacggc tcccctcttt
      781 tcgataaaga tggtcaacca gtattcaata aaaaaccttt cgtagacact gttagttatt
      841 tagatagttt cattaaaaat ggttccgctc cagatactga tcttggttta gatgcttctc
      901 aaagcttcgg cggcgacggt attgtgccaa tgttcatgag tggtccttgg atggttaata
      961 cactgaaaga cactgcccct gacattgacg gaaaatgggc tactgcagta ttacctaaaa
     1021 aagaaaataa cgaatcaagc cttggtggcg ctaacctttc cattttcaaa tatagtgata
     1081 agaaagatga tgctctaaaa ttcatggact acatgagtca acctgatgtg caattatctt
     1141 ggttaaaaga tacaaactcc atgccagctc gtatggatgc ttgggaagat gatatgctga
     1201 aaaatgaccc ttactacaaa gtattcggcg aacaaatgaa aacagctgaa ccaatgccac
     1261 ttatcccaca atttgaggaa atcgctcaat tatatggaaa atcttgggaa caaatttatc
     1321 gtggtggtgc agatgtacaa acacaaatgg atactttcaa cgatcaagta gaagcacttc
     1381 ttaaaaaata acgaataaaa agggcaaatg atttattctg ccatttgccc ttttagaatg
     1441 gactggatgt tatgaaacaa tttttaaata aaaatacacc ctatttgttt atatcgccag
     1501 cactgttttt acttcttctg ttttccctac ttccgatttt gcttgctttt gtcattagtt
     1561 ttacggacat tgatttagtc gggcttgccg attactctaa aattaacttt gttggtgtgg
     1621 acaattacgt caatattatg caagacccgg tatttttaaa atctattttt aacacgcttt
     1681 tctatgtaat tattggcgtt ccacttgtta tcgtctgctc gcttggtatt gcgctgatga
     1741 ttaacttctc acaagcgaag attttccaat ttttccgctt aatcttctac actccttcaa
     1801 ttacaaacgt tgttgctgta gctgtcgttt ggagttactt atataatccg cgctttggtt
     1861 tacttaacta tttgctctcg tttttagact taggaccagt tccatggtta caagacccta
     1921 ctattgcgaa attatcactg attatcctag ctgtttggcg ggcaatcggt gtaaatatga
     1981 ttattttctt agccgcacta caaggcattc cacgtgaata ttatgaagca gcctcccttg
     2041 acggcgcaaa tagccgccaa caattattta aaattacggt tccaatgctt cgtttcgcca
     2101 ttttctttgt aacagttaca acgatgattg gttggttgca attcttcgag gagccgttcg
     2161 ttatgacaga aggtggacca cttgatagta cgaactctgt cgccctcttt atctatcaaa
     2221 acggtttcca attaagtaaa tttggttatg ccgctgctgg atcgttcatc ttgtttatcg
     2281 cgattattat tatcacgatt attcaattcc ggattcagcg caaaaataat gatggggata
     2341 tttaagagag gagtgtttat aaatgaatca atatagacaa aaatcgcgcg gcgctcaaat
     2401 tgccgtaatt acaattttaa cggttggcgg attctttatg attttaccgt tcatttggat
     2461 ggttctctcc tctttgaaaa cggatgctga aattttaaaa atcccaccta ctatttggcc
     2521 agaaactttc acactagata atttcaccaa actatttact gaaatggact ttgctattta
     2581 cttaaaaaat acgttaatca ttgtgttctt ctcgtttttc ggtttatttt taaatgcgat
     2641 ggcgggttac ggctttgcta aatttaaatt taaagggaaa aacaagttat tttatcttgt
     2701 tcttgctaca atgatgattc caggacaagt aacaatgatt ccggtttact tgctgcttaa
     2761 tgcggctgga ttaacgaata cgatgacagg gattgtgctt ccaggacttg ttggggcatt
     2821 cggaattttc ttattccgtc aatttatgtc caccatatcc gatgatttac tcgaagcagc
     2881 aagacttgat ggcgctagtg aattttatat tttctggcgg atagttatcc ctatttcccg
     2941 ccctgtgctt gcggtacaag gtattcttac tttcatcgct ggttggaact cgttcttatg
     3001 gccgttaatc attgccaacg acgaaaaatt ctacacccta tcagttggcc ttcaattatt
     3061 aaaaggtcaa tatggcagca actacgcctt acaaatggcc ggagcaacct tcatggttat
     3121 tccaattatc ttgattttca tgacattcca aaagtacatt ttaaaaggct tcaacgtttc
     3181 tggaatgaaa taattagtca aaaaagagct tacccattta ggataagctc ttttttatta
     3241 tggtaaaaat gtttcaccca tcaagtaaaa gtctacttca cgagctgctt ctcgtccttc
     3301 tgcaatcgcg gttacaacta aactttgacc gtgacgcgca tctccgcaag cgaatacgcc
     3361 ctcttcgctt gtgcggtaaa atcctttagc agcatctatc gtatggcgct ctgtttttcc
     3421 tacaccaaag tttgtaaaaa tatcttcggt tgttcctgca aaaccaatcg caattagaac
     3481 catatctact tcaaagtatt tttcgctacc ttctacaggt gtatattttc tttctgcctt
     3541 attttcttct acttctacag tatgcagtcc aataagattt cctgcttcat ctttttcaaa
     3601 agaagttgta ttaataaggt actcacgtgg atctcttcca tacactgctt ccgcttcttc
     3661 gtgcgcataa tccattttga aaacacgtgg atattgcggc caagggtttt cgccatcacg
     3721 caattcgggt agtttatctt gaataccgaa ttgataaata ctttttgccc cttgtctgag
     3781 cgcagttgcc acacagtcag cacctgtatc tccaccaccg ataatcacca catttttacc
     3841 tttagcagaa agtgtttgta ccccgccgtt atccagatta tcacgcgtac tttgcgataa
     3901 atacggaaca gcgaagtgaa tcccaactgc atcacgtcca gcaagtggga tatcgcgcgc
     3961 attccctgct cctgtcgcaa gaacgataga atcatactct tctcgtagtt ctgcaaaagt
     4021 aacatctgtc cctgctgcaa cacctgtgac gaattcgatt ccttcttccg ccatcaagtt
     4081 cactcggcgc gttacttgtt ctttctccag tttcatcgtt ggaataccgt acattaataa
     4141 gccaccaatg cgatcacttt tttcaatgac cgttacgcta tggccagctt tatttaattg
     4201 atcggcgcag gcaagtccag ccggtcctga cccaatcaca gcaattcgtt taccggtacg
     4261 ttttttagga ggagccggtt taatccagcc ttcttcaaaa cctcggtcaa taatcgcttt
     4321 ttcgatggat ttaatcccta cagcaggttc cgaaattgcc accgtacagc caccttcaca
     4381 cggtgccgga caaatacgac cagtaaactc tggaaaatta tttgttttta agagtagttg
     4441 taaggcttca taccagtcac cccgataaac ggcatcgttc cactcgggaa ttaaattatg
     4501 cagcggacag cctgaaacac catttttaat ttccattcct acactacaaa acggtacgcc
     4561 acaatccatg caacgagcgg cttgtaatgt taaatctgct accggcattg gtaaactata
     4621 ttcgttccag tcacgtgtcc ggcttttcgg atcacgtcct ggagagggaa ttcggtcata
     4681 ttccataaat ccagttgctt ttcccatggt ttcactcctc tctatttcgc cactccggca
     4741 actaattttc cgtctttatg ttcataaaaa gcttgtaatt cagcttcatc atgtgttttt
     4801 ccagtttgtt caagcgtcgt gattctcgtc agcatcattt catattcatt tggaatgacg
     4861 aaaataaaat tcgctttctc tgcttcccaa ttttgcagaa tatctttagc aaaattgctt
     4921 cctgtaaggt ttgcgtgttg ttcaatcagc tgttttaatt tagttaattc ggaagtattt
     4981 aaagtagaac ggctgtttac gagttcatga ttgattttgg ctgtcgtcgc ttgtttattg
     5041 tttgtataaa gataagcaac tccaccagac attccagccg caaagttctc accaatttca
     5101 ccgagaacaa ctactgcacc gcctgtcata tattcacaac cattgtcacc gatgccttcc
     5161 acaacagctg tcgcaccact attccgaaca gcgaaacgtg cacctgcttt tccgtgcaca
     5221 taggcataac caccagttgc accgtaaagc gttacattcc cgacaatcgc ggaatcatgc
     5281 ggtttaatag gtgttttagc atctggacta acaatcaatt tgccaccaga aagtcctttt
     5341 ccgaagtaat cattggcgtc accgtgaatt cggagcgtca tgccaagagg cgtataagca
     5401 ccgaagcttt gtccagctga accaacaaaa tcaagtgaaa tggtatcttc cggcaatccc
     5461 tctgcaccat attttttgct aataaaggag ccagcaaccg ttccaatcgc gcggtcaaca
     5521 tttcgtacag cgaaagttcc agttactttt tcaccgtttt ctagtgccgg ctgaattaat
     5581 ggcacaagtt cgcgcatatc aagcgtttgg tcgattttgt ggtcttgttg ttttgtgcaa
     5641 tattggactt ggtttttata aaaatcatca ctataaagca tattcgaaaa gtcgatatat
     5701 tttgctttcc aatgtgcttc ttttttctcg tgagtagtta aaaattcttt atgtccaatg
     5761 atttctgtta aacttctaaa gccaagttcc gccatcattt cgcgcatttc agcaacgata
     5821 aaatggaaga agttcacgac ataatctgcc gaaccactga attttttccg cagctcagga
     5881 ttttgtgttg ctacacctac tggacatgta tccaagtgac aaacacgcat catgacgcaa
     5941 ccaagtgtta cgagtggtgc cgttgcaaaa ccaaattctt ccgcgccgag catagcggca
     6001 accagaacgt cttttcctgt cattagtttg ccatctgttt cgacaacgac tttgtttcta
     6061 agtccattta gcaagagcgt ttggtgtgtt tcagctaagc cgatttccca cggcactccc
     6121 gcgtgacgga tacttgttct tgccgccgca ccagttccgc cttcataacc gcttactaaa
     6181 ataacgtcgg cattcccctt cgctacgcca gcagcaatcg taccaatacc agttttcgaa
     6241 actagtttca cattgatacg tgcattttga tttgcatttt ttaaatcgaa aatcaattga
     6301 gacaaatctt caatcgagta aatatcatga tgtggcggtg gtgaaatcaa tcctacacca
     6361 gttgttgaac cacgcgtttt cgaaatccat ggatagactt tatttccagg caagtgtcca
     6421 ccttcaccag gtttcgctcc ttgagccatc ttgatttgca gttcctctgc attgaccaag
     6481 taatggcttg ttacaccaaa acgaccagat gcaatttgtt tgatagcact tctacgccaa
     6541 tcgccatttt cgtccggggt aaatcggttc gggttttcgc cgccttcccc actattactt
     6601 ttcccgccga tacggttcat tgcgatagca agcgcttcat gagcttcttg actaatcgaa
     6661 ccataagaca tcgcgccaga cttaaatcgt ttaaaaatgg cttcggccgg ctctacttcg
     6721 tccagtggaa tcggcttgcg atcacttgta aaagtgagta atcctcttaa aaaggcatta
     6781 ttttgatttt gcattaaatc tgaataaaga ttatacgttt cacggtcatt ttctcgagta
     6841 gcttgttgca aagaatgaat cgctagtgga ttgtagacat gatattctcc gtttgagcgc
     6901 cactgatatt ccccgcctgt attaagcgtg aaactctggt agccgacatc atgataggct
     6961 tcgcgatgac ggagccaagc ttcttgcgcg ataacttcca gtggaatccc gccaatttgc
     7021 gaggctgttc ccgggaaata atgtttaatt acatcatcac caataccgat tgcttcaaaa
     7081 atctgggcac cacggtaact ttgcactgta gatatcccca ttttggacat gatttttaga
     7141 attccatctg taattgcttc aatataacga ctttccgcct catcaagtgt aaatcctttc
     7201 atccgtcctt ctttaatcaa gccgtcaaac gtatcgatag caagacttgg aaataccgcg
     7261 tctgccccgt aaccaattaa gagcgcacat tgatggacat ctctcgcttc cgctgttttc
     7321 acaacaatac tcacttgtgt acgcgtccca gctttaacta aatgatgatg taatccactg
     7381 acagctaaga gagaaggaat gccaatccaa tccgcattta ccccatcatc tgataaaatg
     7441 agcaattctg ccccagctgc gattttttca tctgcttcta caaataatga ttctaagcga
     7501 gcttctaaac catctctttc ctctgcctta aataaaattg gtaaagtgac agtcggttgg
     7561 gcaaattttg tttgttgctc aagtgccgca aattcttttc gagataaaat tggtgttttc
     7621 aagcgaatcc ggttagcatt ttgagcagtt ggatttagaa tattaccttc atcaccaagt
     7681 aacgtcatcg cagaagttac cgtttcttcg cgaatcccat caatcggagg gttggttact
     7741 tgcgcaaaaa gttgtttaaa gtaattaaat aacacttgtg gtcgttggct taaaacagca
     7801 agtggtgcgt cataacccat tgcgcccatt ggatcttttt tctctgttac catcggaatc
     7861 aaaattttat ttaactcatc ttgagtgtaa ccaaatgcgc gttgtttttt aaaacgttct
     7921 gatttatcca ttgcttcata atgtaaatcg gctgttgcta aatcggcaat ttctgtcatt
     7981 tctgcttcca accattcacg gtacggtttt tccgttgtta gttcttcttt taattcagca
     8041 tccgtcacaa ttcgtccttc ttctaaatca attaacaaca tcgttcccgc gccaaccgtt
     8101 tctttgcgaa taatttcact cgaatccact ggcacaacgc ccgtttccga agaataaata
     8161 atcgtatggt ctttcgtttc ataataacgc gccggacgta agccatttct atccaaaatc
     8221 gtcccaataa ctcgaccatt cgtaaaggaa atggatgtcg gcccatccca cggctccatt
     8281 aatgtactat gatattcgta aaaagcacgt ttcggatccg tcatatgcgg atttttatcc
     8341 catggttctg gaataagcat cattgccgca tgaggtaacg aacggcctgc ctgcactaaa
     8401 aattctaagg cattatccaa agtagccgaa tcactaccac tttcgtcaat aattggtagc
     8461 aatttggcta aatcttctcc aagtaaatca gattctgctc ttttttcccg agctttcatc
     8521 cagttgacat taccacgttg cgtattaatt tcaccgttat gaattaaata tcgatacgga
     8581 tgcgcccgct cccaactagg aaaagtattc gtcgaaaaac gagaatgcac tagcgcaaaa
     8641 gccgatacat atgctggatc tgctaaatct aaatagtatt gattaatttg ttctggtagt
     8701 aacattcctt taaaaataac cgttcttgtg gataaacttg gaacgtagaa agtctctgta
     8761 atttgcttag aagtcgcagc aaatttttcg atttgctttc taattaaata aagtgctcgt
     8821 tcaaacccag cttcgtctaa cttggcattt ttttgaatga atagctgata aatcgctggt
     8881 tctgtttttc ttgcaccggc acccaccttt gttacatcag ttggtaattt gcgccaacca
     8941 aggaacgttt gaccttcact cgcaatcagt ttttccgttt cggccattaa acattcgcgt
     9001 tctgttttat tttgagggaa attaaacatc ccaaccgcat aatgatattt ttcaggcaaa
     9061 ttaataccta gtttgctaca ctcgcgtcgg aagaaagagt ctgaaatctc aagtaaaata
     9121 ccagcgccat cacccgtatc cccaccaact tctccaccgc ggtgctttaa ttgacaaagc
     9181 atatgaatac cttgttcgac aattttatga gaagaaatct ttttaatatt tgctacgaag
     9241 ccaattccac aagcatcgtg ctcattttct gggttgtata ggccgtgttt ttttggtaaa
     9301 ttagtttgtt tcatcctagt tcctcctctt caaaaaccga atccttctaa gtctttctgg
     9361 taattattta aattaactga taattaacca gcgattcagc ttaccttaca tttcttgtag
     9421 tatctatttt attccttttc atttatcgaa acaatatata taatagaata aaacaatctc
     9481 atttcgagaa caattggagg taagaaatgg aactgcgaca attaaagtat tttatggaag
     9541 tagcccgtgt cgagcatatg accaaagcta gtgagaattt acacgtagcc caatctgccg
     9601 ttagtagaca gataacgaaa ctcgaagaag aactcggcgt acatttattt gaccgtgttg
     9661 gaagaaatat gcaactcacc agcgttggtc aagatttctt aaaacaagca gcaatcgcct
     9721 taaacgagct acaaaaagcc gaagcactcg tgaccgaata taccgatccc gcaaaaggaa
     9781 ctgttcgcgt cggcttaccg aactccctgt ctaccaaagt gttgccatcc gttatttcga
     9841 cctttcggga aaaatatccg caaattacct accagtttat ggaaggcacc aatgaagaac
     9901 ttaccgagat gctcttaagt ggcgtccttg atatgacttt tttatcgccc gtcccagaat
     9961 ctagcgaaca aattgaagcc attcgttttt ttgatgaaaa attgaagcta attgtcccta
    10021 aaacccatcc acttgctgaa aacttcaccg tttcactaaa agagctcgct tccgaaaagt
    10081 tcgtccttta tccagaagac tttgatttat ataaaatcgt aacaaaagct gccaataaaa
    10141 aaggattcga gccacaaata gcatttcaaa gtagagattt ttatacaatt caaggacttg
    10201 tcggagcagg tcttggtatt agcattttgc cagaaatgat tttagatgga gcgattttta
    10261 aggaaacgaa aagtatcgct ttgcgtgata aagaattgcg gcgttcggtc gggattatta
    10321 cgacaaaaaa acggaaccta tccccttccg agaatttgtt ccgttcgttt attatttcgt
    10381 tcttttcgaa ttaattattt tcagaaaatg cagctggata atggatagtt ccagctaaat
    10441 tttctaaact accatcatat aattctaata acataaagta ttcagcaggc acatcaaatg
    10501 gcgcaggaat agcaaactgc tcagaaggaa taaagccaaa tcgcggataa taatcagcat
    10561 gtccaagcac agcaatggcc ggatatgctt tttcgcgtga taaacggatt ccttcttcca
    10621 ttaatctcga gccaactcgc gtcccttgat acgcaggtaa aacagcaagt ggcgcaagtg
    10681 ctaaaataaa tctgcttcgt ccggctgctt caagcgaaat ctcactaaac ataatgtacc
    10741 caacaataag tccatcctcc gcttctgcga caagggataa acctggttga taataatcgg
    10801 atgtccggat actttcaatc aagtctgctt ccacagtacc cttaaaagct tcctcattca
    10861 cacgacgaat ggcctcgtaa tcttgtggtt gttctttccg aataatcatt tttacttagc
    10921 cactcgtttc attgccatac tatcttctaa ctgtttcatc gcatttaata ctacatcagc
    10981 tgtcatttca ccgggcatca tatggattgt ttcatgtggc tccgttgcac gtttagatac
    11041 ggccacaagc gtttcttccg caagtgtcgc aagtcccata tcatataaac tcatcggaag
    11101 accaagctca gaataaaatg gcaacaaacg ctcgatttca tcccatctat tttctattac
    11161 taattgaact aaaataccat aagctacttt attaccatgc aataagtgat gtgtttctgg
    11221 aaccatcgtt agcgcgtcat gaatcgaatg cgctcctgca caacgtccat aatcatcgcc
    11281 aaaaccaccg accattccac caactaaaat attcgtctca ataattttaa caaacgcttc
    11341 attcaatact tgtttgtcca tggcagcaag tgcttcttcg ctatattgca acaagttatc
    11401 acggcacatt ttggcagcaa aatgcgcgat ttcaatttcg actgatttag ttggtaagga
    11461 attaataatc acgtctgctt cgtaccattt ggctaacgta tcgccaattc cagcaactag
    11521 taactctttc ggtgagtcta aaatcatttc cggatcaatt aataacagcg cattactact
    11581 cgcaaacaca tcgtaacgaa tcatagcgcc ctcttcgtcg tacatcacac taagtggtgt
    11641 ataagcggca caagttgatg caagtgtcgg taagataatg actggtaaac gtagaactgc
    11701 tgctgtcgct ttacatacgt cagctatttt tccgccacct actgcgataa tcgcatccat
    11761 cttatttgtt tccatgattg ccaccagacg atcgcgctcc tcgtaggtag aaccaccatt
    11821 atatacttca aaagtagatg taacagttga taaaacaggg aatttctttt tagcgacttc
    11881 ccaagaagca tttccacgaa ctactaatac atttttcaaa ccgcggcgtt ctaggtgagt
    11941 aggtaatgta tcccacgcgc ctacttggca taaatattct tgcggagctc cgcgaacaat
    12001 caattcttta ttcaacaaaa atcatccctt ctgtctggca cggtcggata ttcggctgcg
    12061 acatttataa ttcaaattgt ataggaactt aaacctactg tcaatcgcac tattgcttag
    12121 cgatttcgtc atcaccgaac cattttttac taatttcttg catttttcct tctttgtata
    12181 atttttcaaa agcttcattg atttttgttt gcagttcttt atcacttttg cgcattccta
    12241 cagcaaaatc tgtggcatca aaaccgcctg ttataatgtt gtaatcgtct ttattttttt
    12301 gtttatcaat gtaataacgc gcgtacactt catcaatgat taaaccatcg attcgtttgt
    12361 tattcaaatc aataaaagct gtatcaaacg tatcgtataa ttctggttcg ttattattta
    12421 taatgtctgt tagcacttct gtttttttcg ccatgtcatc gatcgaactt gccccatttt
    12481 gtgctccgag cgttttattc ttcatatcgc taaattgatt aatattgctt gattttaaag
    12541 tgactaatac ttgttcattt ttcatgtaag gctggctaaa agcgacttgt tttttcctcg
    12601 catccgtcac agtatatcca ttccaaatta aatcaatcga gccgtttttc agttcagatt
    12661 ctttcatcgt ccagtcaatc ggtgtgaatt ttgctttaat gccatattct gcaaatacag
    12721 ctttcgccaa atcaatatca aagccaacta agttatcgtc tttatcacga aatcccatcg
    12781 gtacaaaact atcatctaaa ccaattacaa cttctttatc ttttttaatt ctactccact
    12841 ggtcctcttt agattcaccg ctggaacaag ctcccagcgc taacattacc attaacatta
    12901 cagttattaa taatcctttt ttcatgttag attgcctcct tttttaatgg ttctacttcc
    12961 atcatttgat ccgctacttt ttcggcaaaa gtgtgatcat gtgtaacgat aatttgcgta
    13021 ataccaacct ttttcaaact taaaattaat gctgcaacat gatcgcgcaa gtcaggatct
    13081 aaagcggatg tcggttcatc aaatagcagc actttgggat tcatcgcaag cgctctggca
    13141 atcgcgaccc gttgtttttg tccgcctgat aattggtacg gcatactatt tgctttatcg
    13201 gctaaatcaa gtaagccaag taatcgttct gcttctttaa cggcatctgc tttctttgtt
    13261 ttccgagcaa gggtcggtgc taaaatcaag ttatctaaaa cacttaaatg cggaaataag
    13321 tggaattctt ggaaaacaac accaatcgta ttttccacat cttttctcga cattggatca
    13381 attttttcct cgtcaataaa aatttcacct gtatccattt tttccagtcc actaatacag
    13441 cgcagtaaag ttgttttccc accacctgat ggaccaacaa ttgagagaat ttcaccatct
    13501 tgaagagaaa tattcacatt atctaaaatt gttttttgat caaatttttt cgatagattc
    13561 ttaatttcta acattttctt cacctcattt ataataacta aaacgttttt cgagttgttt
    13621 aaataatatg gttagaatag ccgttaaagc taagtagatt gcagctacta atacgagtgg
    13681 aatcagtgta acatctctac tcatagcaat tttccctgct cttagtaagt cgccaattcc
    13741 aagaatatat actaaagaag agtcttttac taagttaata acttcattcc caattgctgg
    13801 taagacacgt ttgacaactt gtggtaagac aattttctgc agtgtctggc cgtaagtaag
    13861 acctaaaacc ttggcgctct catattgccc attttcgatg gaaagaaatc ccccgcggaa
    13921 aatctctgca aaataagctg cataatttaa aataaaagca ataaaaacgg catccattcg
    13981 gtcaaaaaca accccgataa tcggtaagcc ataataaata aaaattaatt gtaaaagtaa
    14041 tggcgtgcct cgcataatcc aaatgtaaat atttaaaata aatttaagtg gggctatttt
    14101 gctaatattt ccgactgcca caaccgcccc gagtggtatc gaacaaacta acgtaactgc
    14161 aaaaacgagc agtgttgttt ttgctccatc aagtaatgct ggtaaaatct ccgtgatata
    14221 atccatcatt cttcgctcct tttttaacat aaaaaaatcc cgtcgcactt ggcgctaatt
    14281 ggccaagagg acgagaataa tattcacgtg gttccacctc aatttgctga tacttcgcag
    14341 taccaacctc tgttagttcg agactaacaa gctataacgg gcttaacccg agttcaccta
    14401 ctcacttatg cttcagcaaa ccagctccga gatgtgttcg ataacgctat ctttatcctt
    14461 tcacaccaac caaggactct cttttaaaga attacgctct acttgttctg ttcgacgctt
    14521 ttacttcttc ttgctaatac tctaccacga taaagcgata gagtcaacca ttttatttac
    14581 aaaaaaagtg atacgccaat cataattggt gtaccacttt ttattaatct ttggcaatca
    14641 gtaagtaatc atctttctgt tcaaagtaga ttttcacttc tgttcctacg ccgctttcag
    14701 attgaataca aatttcgtga cctagtttct ttgccatttg tttagctagg tataaaccca
    14761 tacccgtagc ttttttctct tgtctaccaa tattacccgt gaaaccttgc tcgaacacac
    14821 gtggcaaatc ttcttcctta attccacgtc cattgtcttt tatgtgtagc actttcttct
    14881 cagatgcttc tgtatcacac caaattttta cttcgccact gctttttgtg tatttgagtg
    14941 cattggacaa gatttgatcc aaaataaaac caagccactt gctatccgta cgcacatcca
    15001 tgtccacatt ttgcaaatcc aacttcattt tcttcccaat gaaaagttta gaatgccgtt
    15061 tgactgattc gcgcactact actccaagat tttgctcctg aataaaatag tcttttgaga
    15121 aagtatctag acgtgaaaaa taaagtgcct gcataactaa tttatctatt gttgttaatt
    15181 cttcatcgat ttgtttgaaa atcgtttctg tatcatttaa atcaggattg ttaattaaca
    15241 ttttacttgc aacaaccggg gttttcactt catgcaccca atataaaata aaatcatgat
    15301 attcttgctg tttatcttgt agcttactaa tagttcgtaa ttcttcttta tgtttttttg
    15361 ccattagttg attaaaaaag gcttgttcgc gagtacgtgg ttttggtagt aattcaatga
    15421 tattctcttc aatctctccg ctaacaagtt ccttcatttc acgccaataa ttatatttaa
    15481 agaaatagcc cagcacgaga taggaaagca agaagactaa aacaaaaaca tacaagtaaa
    15541 tgaaatttcc aagcgttaat ttactgttcg gatcgatcga aatcaacacg cctacaaaaa
    15601 acataatact acaaaaaaac aataagaaaa atcgcttatc ttttatataa ctccaccaat
    15661 tcatggcgca cctcctcgct actaattagt ttacttcatt tgaaataatt tgaaacgtag
    15721 caaaatcaaa caacccttga tcggttaatt ttaattctgg aatcactggt aatgttaaga
    15781 atgacaatgt taaaaatgga tcaaaaccat cagccgtact aatctgttta aaggcattta
    15841 aaagacccgc taaatcgttt tccacttctt cgtatgattt atcactaagc aatccagcga
    15901 ttggaagggc taaatcatga agtacctgac cagctccatt tactacagca ataccgccac
    15961 ctgtttgagt aatatgatca atagccgctt tcattgcttc atcactaatg ccaacagcaa
    16021 caatattatg agaatcgtgc gcgacagtcg tagcaattgc gccttctgtt aaaccaaagc
    16081 cttttacaat gcctaatcca acacaaccag tatcatggtg acgctctaca actgccattt
    16141 tgagtaaatc gttttccacg gttggaacaa acttaccgtc ttgaatagcc acttgttcga
    16201 tacgtttttc tgtaaataaa ctattgggtt gcatcccgat tacataacac gtttctttgg
    16261 tcaaaggtaa tgctaaatct tgtaaactca catgatgatt aattggtgga gatacaaatg
    16321 gtactgccgc ttgttgctta aatgcagctt cgtgacgaac accattatcc acgactactt
    16381 ctccattttt caaaactttg ctaatttcta ctgtttctat atctgttaga aaaacaatat
    16441 ctgcttggta tcctgcagca actgcaccaa ggtatggcaa attatgacaa ttagctgcat
    16501 taatagttgc catttggata gcggtaattg ggtctattcc gtttttgata gccagtctaa
    16561 tgttatagtt aattgatcct tccgtaatta aatcattaat tagtttatca tctgtgcaaa
    16621 agcaaaaacg atggctattt ttttcagata ctgcaggaat tgtttgaagt aaatcacggc
    16681 ctacagttcc ctcgcgtagc ataacaaaca ttccggcacg taagcggtct gttgcttcct
    16741 tagcagtagt actttcatga tctgtccgaa taccaacagc caaataatta ttcaaatcag
    16801 cgctcgttaa gccagctcca tgtccatcaa ttcgtccgcc ttctttttta gcatcgataa
    16861 ttttggttaa aatatccgaa cttccttttg ctacagatgg aaaatccatc acttctgcaa
    16921 ggccgattac tttttcatgt ctataaagcg gatggagttt ctcagcatgt aatgtttcgc
    16981 cattatgttc gccttccgtt gcaggaacag aagatgggag catgacaaac atgtctattg
    17041 gtactccttt ggcatcttct agcatgaatt caattccttt ttctccagcc acattggcaa
    17101 tttcatgcgg gtctgtaaca atcgttgtaa caccatttgg gagtaagaca cgggcaaact
    17161 cagcaggtgt gaccatcgca ctctccacgt ggacatgtgc atcaataaaa ccaggtgcaa
    17221 tgaaggcacc agcagcatct attatctttt ctgcatctgg aaaattgcca ataccagcaa
    17281 tataaccatt tttgatggca atatctccgt ccattatttc tcctgaaaac acatttatta
    17341 ttcgtccatt ttttattact aaatctgctt ttgctcgtcc atcacttact gcaactcgtt
    17401 cttgcagctg ttctaaattc tccaccaaaa ctcgcctccg tcaattaagc ttcaaaaaaa
    17461 ccttcatcaa gcaaataacc ttctgcgctt tcaagggttg ggaaaactgc ttccaagttc
    17521 tcccccgtaa aaataaccca cattttattt tcatacacta gtgaaagttt ttcgccacta
    17581 ttgtcttgat atattttagt tagaccttct ttatagccat cctcgtcact atccatgaat
    17641 tcttttgctt ctaatagtaa tacgcggatt tcattttcag agtaatcttt tacattcaca
    17701 tagccttgtt tgtcgagtgg ctctacctct agaaatggtg cataaacaaa agcattaccg
    17761 tttggatgaa gatgtttgac gatgattttc ttgtctcttt tacttgctgg atagtgtaca
    17821 ttaatacggc ccatagaaat ttcgtgtaat tcaaagccgt cgatagattc tattaatgct
    17881 tttttttctt caaagtttaa catagtatta tttttccccc aaattaattt tcttttaaaa
    17941 tagctgtcac taaagctggt aaccatactt ttaaatcatt aaacacaaaa ccagcttcgg
    18001 tagctttcgt attatctaaa taataggttt tttcaatgcc aaacggagaa tcatcgacgt
    18061 catccgtcac ctcttcaact agtgctaatt tcccgatttt ttcttcaagc attttgatga
    18121 aaccatttaa tgcgtatgtg ccattggagg tagcgtttac cggtcctgtc agatccgatt
    18181 ccacaccaac ccactctaaa aaatgcgccg cttcatcaga agtaataaag ccaatctcag
    18241 cttgtccatt actaatccca atttcttggt ggtttttaat atgattaata tgaaagtgaa
    18301 ggcgttttgt gtaatcgtca agtccaagca cgattggaaa acgaactgca actactggaa
    18361 aagaagcttt ttggaaaaat acggcttcag caagtcgttt cccttcaccg taatcaaaat
    18421 cttctttatc tccaataaca atttcataat gctctggatt aaagtcagct tcaactaaag
    18481 ctcgaccttt ttgactataa acagagagtg atgatgtata tatgtatcgt tttaccttgc
    18541 ctttaaatgc atctacggca taaagtgctt ctttcggaga gaaacatata ttatcgtaaa
    18601 taacatccca gtcttctttt gctaattgga ataaagcatc tcttgattct cgatttaaaa
    18661 taacccgttt gacagtatca ccaaaattat cttctgtttt gccccttgtc ccaatggtga
    18721 cctcatgtcc ttctgaaaca agtctttcca ctaatttctt gccaaaaaaa cgagtaccac
    18781 cgaatactaa aattttcatt tagactcctc ctccatttac gaaaaacagg aagttcgcgt
    18841 tttttagcgc tatcttcctg ttttttcgtc attcaatcat atatccttgg ccttttttcg
    18901 ttttgataaa ttcgctcaaa ccaatttctg ctagtttttt acgaatacga acaacattaa
    18961 ctgtcaatgt attatcatca acaaaacttt catcttccca aagtgcgcgc ataatttcat
    19021 cacgacttac aatgctacct ttttgtttca ttaattcata taaaatcaaa aattcatttt
    19081 tcgttagctc aattttatct tctaaatgtg taagtgtgtt cgtatcaatg tgtaggaaaa
    19141 cattattatg ctccatcaca ttggcttctt ctaaatctgc gtaagaatat gtccgcctta
    19201 atagagcatt tatccgcgcc attaaaacat ccagatcaac tggtttttca atataatagt
    19261 ctgcacccat attcatgccc attatttggt ccattcgcga attacgtgat gataaaaaga
    19321 taatgggtac attcgaaact tctcgaattt gattacacca ataaaagcca tcaaagaaag
    19381 gaagattaac atctaaaata actaattgag gttcgaaagc taaaaactct tgtaaaatat
    19441 tgttaaaatc ctctactaca ccaatctcaa atccccattt acttaaatgt tttcggattg
    19501 tatcacgaat tacttcatca tcttctacga tatatacctt taccatttct agtgcctccc
    19561 tcggtggaac tctcttctca ttttagctga aataaccaca aaagccaatt actttttatt
    19621 ggccatcaca attttggtaa aagaattgat acacaaaaag taataagctg cataacaaag
    19681 aatataaata cctgtaccaa ttaataccgg atattttata ttatccatta aattaacaga
    19741 aataccccac agtgcagcca tggaatgcgc aattccaaaa aataatggaa taacaaaaat
    19801 tggccaaacc tgcttggaaa taattttccg gatttctttt tccgtaactc ctaatttaaa
    19861 taaaatatca aacttggctt tttcagaaac tgcatctgta actaatttga agtaaatgat
    19921 acttcccgtt gctaaaaaga aaacaatacc aataaaaata cctataaata atagtgaacc
    19981 taccactgtg gagattaagt ggtaattcgt ataataagaa gaaacatttt ccgagaataa
    20041 tgaaggctcc ccgtcaacga ttgtttgcac tttcttatcc aagctttcac tatgattcgg
    20101 attagtaata tcaaacattg tcacagattc aggagggaaa agtcgctcca aatcatcata
    20161 atattcatcg gaaacaacca gcgtttcata agaaatccct gtattgaaaa ttgaattttc
    20221 tcgaaaatcc actactttta ttggtggcat tttctttgca actgatttat ttgattggac
    20281 gaccatttta cgagtaagcc atttttcttg aatgtccgat cttgcgtaat aagtattttt
    20341 tccaagtaag attgcatcac cataggcaat ttttttagat tcgacaaaat cactctgctg
    20401 cctttcaccg atacgattat attctgattc cgatacaatg gtatgaatga atgtatccat
    20461 atgcatttta tatttaggaa tatctttata ttccacttca gcactaagca tctctgcttg
    20521 catcaatttt ttcaatttat gatcttgatc atcgcgaatc gtttgaataa tctctttttc
    20581 atttttagca gaaatattga gcacttgata actggaagga ttctccgctg aaatatcatt
    20641 aattgtacgc acataaaaac tactcatgga gccgataatc gttaacgttg tcgcactaag
    20701 aacagcaatc atcgcaatcg taccagcatt tttctttagc ctaaaacgaa gcgatgtaat
    20761 ccctagcata ttcgtccctt tataaaagaa acgtttatta ttgtatagtt gtcgaatgac
    20821 ataaggggtg ccaaatctaa ccatcagcca ggttcctaaa ataacgcaag ccagtatcac
    20881 taaaattaaa tcaaaaaaat cataggctag ccaaataggc gattcttcaa tattcctcgt
    20941 tgccagatag tatccaaaag tgattaaagc taacccaatt aacataaaaa ttagtgaacc
    21001 tttagctact ttttcttctt tgtcatcatt tttgaatagc tgattcaaat tataacgtaa
    21061 tacaagaaaa actgcataaa ccgatgtgaa aagcataata ccaaaaaaga ccagtatcgt
    21121 atcgataatc gctttaaatg aaataataaa ctctgcatca atcgcaaggc cgacaatcca
    21181 aaataagacc attgcaaaca atttagaaga gaaaattcca attaaaacgc caaaaatagt
    21241 tgcaagcata tatagcatcg cattttcaaa aaataatact aatacaattt gtgattttcg
    21301 caaaccaagt aatgaataaa gccctatttc tcgttttcgc cttttaagaa aaaaaccatt
    21361 ggaataaaat ataaaaaaga taataaacaa tattaacatg agactagctg acgaaaacat
    21421 ggccggtccg aataattccc aacgtttaaa cactgtgtca atcagcgggt tatatgataa
    21481 cgaaacaaac gtaaaaaaaa ctaatacaca aacaattaac gaaacaaaat aaacaatata
    21541 ttgattaaag ttctttcgca tattggtcag cgcgacttta aataacatcg ttttcgccac
    21601 ctccaagaag cgccaaaaca tctaatacct tctggaagaa ttgttttcta gaacttgtcc
    21661 ctcggtagat ttcagtgaaa atttcgccat ctttaataaa cataattctt tcgcagtaac
    21721 tggctgcaaa agcatcgtgc gtcaccatca taatagtgga atcacgcaca tcttttgctt
    21781 gagaaagtcc ttctaataaa ttggtcgctg ctttggaatc aagcgcacca gtgggttcat
    21841 ccgcaaaaat cagcgttggt tctgtaatca ttgctcgaca aaccgctgtt cgctgctttt
    21901 gtccaccaga tatttcggtt gggtacttgt tccttaactc aaaaatccca aattgacgag
    21961 caataatttc aaaccgctga tcaatttccg cttgtttaat acgagcaaga gccagcggta
    22021 gaacaatatt atccttcaca gtcatcgtat ctaataaatt atagtcttga aatataaaac
    22081 caagctgatc tcttctaaaa acagctaatt cttttccgtt catagtagaa atttgctttc
    22141 caccaatctc aatttctcca gaggttggtt tatctataga agacaataca tttaataaag
    22201 tagatttacc agcaccagag ggacccataa tgcctacaaa ggaacctttt tgtatctcta
    22261 aactaatact tccaagcgca gaaaacaaat ttccttttga accgtatact tttctaactt
    22321 tatgcgcctt tagcactgtt tccattgtat tcctcccgtt acgttcttta tttggttatt
    22381 ttacctta
//
LOCUS       DASDYO010000036        21678 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.036, whole genome shotgun sequence.
ACCESSION   DASDYO010000036 DASDYO010000000
VERSION     DASDYO010000036.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 21678)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21678)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21678
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.036"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(94..840)
                     /gene="fabL"
                     /locus_tag="U0290_001172"
     CDS             complement(94..840)
                     /gene="fabL"
                     /locus_tag="U0290_001172"
                     /EC_number="1.3.1.104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-[acyl-carrier-protein] reductase FabL"
                     /protein_id="HEM2301217.1"
                     /translation="MNRVALVTGSSRGLGREIAIALANEGYDIAVNFSRNRKKAEEVQ
                     QEIEQLGRKCVIFKANVGDVEKIRDLFKAVDEEFGRLDIFINNAASGVLRPLMELEES
                     HWDWTMNINAKALLFAGQEAAKLMQRHQSGKIISLSSIGSIRYLENYTTVGVSKAAVE
                     SLTRYLAVELAPFGIAVNAVSGGLIETDALNHFPNREELLKDAISKTPAGRMIEPNDL
                     VNAVLFLASEKADMIRGQTILVDGGRTLLV"
     gene            complement(844..1941)
                     /gene="mutY"
                     /locus_tag="U0290_001173"
     CDS             complement(844..1941)
                     /gene="mutY"
                     /locus_tag="U0290_001173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="A/G-specific adenine glycosylase"
                     /protein_id="HEM2301218.1"
                     /translation="MRKMKRLTWDETKITAFQEALVSWYEANKRVLPWRENTDPYRIW
                     VSEIMLQQTKVDTVIPYFNRFMTQFPTMEDFVQADEADILKAWEGLGYYSRVRNLQTA
                     MKQVMADFSGKVPTDLTTILSLKGVGPYTAGAILSIAYNQAEPAVDGNVMRVIARVLE
                     ISEDIMKVSTRKIFEEVLYQLIDKENPAAFNQGLMEIGALVCTPTKPMCMLCPLQPFC
                     EAHKNGVETNYPVKIKKVKTKTKELLSIIVISEDGKIAIEKRPENGLLANMWQFPTIE
                     ISKKENEEVAKLQFLHNYGLDVLLEDEPIAHIKHVFSHLVWKMDIRVAKLQSAIPNEN
                     WYFATEEEMKRLAFPVPYQKMWQAWKDFKGE"
     gene            2141..3121
                     /locus_tag="U0290_001174"
     CDS             2141..3121
                     /locus_tag="U0290_001174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-dependent hydrolase"
                     /protein_id="HEM2301219.1"
                     /translation="MDTGTHVVMGIALGALATVDPVVAGSSQAAIGIMTATIIGSQIP
                     DIDTVLKLKNNADYIRNHRGITHSLPMLAIWPLLISSVLYLLFPAATFIHLLLWTFIA
                     VGLHIFVDIFNAYGTQAVRPFKETWVAFGFINTFDWFIFGSHVVAIAAWLLGSPVLAT
                     FVTLYVILALYYVARFVTQRMIKHAVQNLIPDSEEIIIASTIHFFQWRVAVTTKDHYY
                     VGRAFKRNISIYEKFDRLPVPDNEIIRSAKKDKNLAAFISFSKVYNWRIEEKLDGTYV
                     TFTDLRYRSNGHYPFVAVVKLDDDLKIVSSYTGWIFSTEKLYKKLAPVSI"
     gene            complement(3150..3611)
                     /locus_tag="U0290_001175"
     CDS             complement(3150..3611)
                     /locus_tag="U0290_001175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dUTP diphosphatase"
                     /protein_id="HEM2301220.1"
                     /translation="MKVRGFEVVNEASRKFPEQTISLPIRGDKGSAGYDFFSNETVTI
                     LPGEKHIFWTDIKSYMQEEEVLNIYVRSSIGIKKGLLLCNGTGIIDSSYYSNPGNDGN
                     IGIAIKNFSNEAVAIEAGERVAQGVFQKYLVADTDIVANESRVGGVGSTGR"
     gene            complement(3623..3856)
                     /locus_tag="U0290_001176"
     CDS             complement(3623..3856)
                     /locus_tag="U0290_001176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YfhJ family protein"
                     /protein_id="HEM2301221.1"
                     /translation="MYTYLDELTAELMTKNPHLDKEQALWWIEMLWSDFESSYAKAGY
                     PYRGPEYAADYVRQQIERHGSFLHQVERKDPNK"
     gene            complement(3858..4667)
                     /gene="recX"
                     /locus_tag="U0290_001177"
     CDS             complement(3858..4667)
                     /gene="recX"
                     /locus_tag="U0290_001177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombination regulator RecX"
                     /protein_id="HEM2301222.1"
                     /translation="MKITSISVQQKNKERYNIFIDEKYNFSVDEEVLARYQLMKGKVL
                     TEAEIEEIKQADMVRKGLNKAINFLSHRVRSEKEIRDYLRKQEMEAFAIDEILKKLAD
                     MDYINDLEFAELYTKTQIKTTLKGPRTIERELVEKGLTREIITQVIEEYSDEAQLENA
                     TKQAIKIMKRNNKSAKKMLQQKIITDLIQKGYTSELAKVAATEATSELDVADEAEILQ
                     KQIEKTMRKNKRYKPSIAKQKTITSLMQKGFSYDTIQSYLTENEISFEEEE"
     gene            4765..5667
                     /locus_tag="U0290_001178"
     CDS             4765..5667
                     /locus_tag="U0290_001178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR01777 family oxidoreductase"
                     /protein_id="HEM2301223.1"
                     /translation="MHILLTGATGFIGDHLVHELEKSDHELYILTRQKLKNRANVHYI
                     EWLNEDKLPNLEDLPVDVCINFAGAGLMDEKWTYDRKKVIVNSRIEATSALLSIVKKM
                     KSKPKLWINASAIGAYTSSKSTIYLDTEENNYADNFLGKTVYEWEKTASAASDLGIRV
                     VYARFGLVLGTDGGSFPVFEKLFQTYTGGRFGNGRQWYSWIHVDDVVAAILFIFDHEQ
                     INGVVNFTAPHPVQEKKFAERLGKKMHKPYKTPVPKKIIKFILGERAMTILDSQRAYP
                     EKLMSNHFEFRFETLQEALDDLLD"
     gene            complement(5688..8285)
                     /gene="mprF"
                     /locus_tag="U0290_001179"
     CDS             complement(5688..8285)
                     /gene="mprF"
                     /locus_tag="U0290_001179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional lysylphosphatidylglycerol
                     flippase/synthetase MprF"
                     /protein_id="HEM2301224.1"
                     /translation="MKEKLMQAYAWFQKNSTVVKIVFITFVMAFVIFEIINIATGIDY
                     PSLKENLTSQSPEQIFIMFIVGLIAVTPMLLYDYVIVKLLPGKFSPSHVIASGWITNT
                     FTNIGGFGGVLGASLRASFYGKNASHKEILLAISKIALFLVSGLSIYCLVSLATLLIP
                     GFANHFVNYWPWLLAGGLYFPILFTITKWKSKSLFVDLPIKRELTLIIASLLEWGFAF
                     GCFAIIGTLMGEPVDIFKVFPLFVIASVIGIASMVPGGVGTFDVVMILGLSQLGVSQE
                     LALAWMLFYRIFYYIIPFVVGLLFFVQKAGKKVNDFLEGLPLLFLQKVAHRFLVIFVY
                     GSGLLLILSSAVPNAIYHVPFLYKIMPFNFLFTSQITIVAFGFLLLGLARGIECKTKK
                     AYIITVIVLGCAIFNTLARVFSMKQAIFLGIVLLCLFLARNEFYREKLVYTWSKVIMD
                     SIIFIVCLAGYIVIGIYNSPNIKHSKEIPDYLRIASEHLWLVGFVGVFIAVVSLVIIY
                     IYLSTTKEKLGSPFEAVKVREHLAKWGGNEVSHTMFLRDKLLFWAANGEVLFSYRILA
                     DKMVIMGEPTGNMDKMEAAIEEVMMNADRFGYRPVFYEVRGTMIPYLHDHGFDFIKLG
                     EEGFVDVQNFTMSGKKKKGERALMNKLEREGYTFEIIEPPFKHETWTTLRAVSDEWLD
                     GREEKGFSLGFFDTYYLEQAPIAIAKNGEGTVVGFASMMPSYTEEMTSIDLMRYSKEA
                     PSGIMDFLFINLFEKAKEDGFQTFNAGMAPLANVGESKYAFLGERLAGLVYRYSQGFY
                     GFKGLRNFKSKYVTEWEQKFVAFRKRSSIAFTMLQLMILVGKKRPLANSQVVLDFPLE
                     EETKKPDSE"
     gene            complement(8312..8986)
                     /locus_tag="U0290_001180"
     CDS             complement(8312..8986)
                     /locus_tag="U0290_001180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM2301225.1"
                     /translation="MQVQKCRFFVLLLPALYLLYGISLALQFGNNADLINTIANSCLL
                     FLATIILTNMARLKNWIDFIWFCVFILYIIILLHLVAYIAVGDFVNSTYTGNFHIQKE
                     MINLIPFTTIENTFQQTLPTMPTIIQILGNVLLLCPLSFFMLYFKITSTAGKTLLVIF
                     LTSCGIELLQFAQTTMITGFESISLPPKRSTDIDDIILNTLSGLIGILLAYAVPSVRK
                     RINKRR"
     gene            9194..10159
                     /locus_tag="U0290_001181"
     CDS             9194..10159
                     /locus_tag="U0290_001181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM2301226.1"
                     /translation="MKELLGLLKEGNKSALTAALVNTVVSIIKGITYFFTGNIAMFAE
                     TLHSLGDAANQFFVFIGSALSKKRPTKRFPHGFGRMVNLVLLGAVIVVGIMAFETIRE
                     GFAHIIHPTSSTGFLINLTVLLLCTVLEFSVLVKAMHEIAHDVGLESKGLRLFKDSIL
                     NLGKAKAATKLVFLEDSVATGGGLLAMIAVIISHFTPFHQAEGIASMLIGVMMFIVVG
                     KVFLDNAAGVIGESDQSMHLTVGQLVMSDPDVRDIQVLTVLKEGDVFHVDVEVELDPM
                     LTLAEVDDIKDRLEESIGKLRGVADVLISFDEDDAIRNWEYGDGR"
     gene            complement(10204..10746)
                     /locus_tag="U0290_001182"
     CDS             complement(10204..10746)
                     /locus_tag="U0290_001182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301227.1"
                     /translation="MRITGERIYLRPFQITDANQKLAFHLANKAFFEGYSMERDDRFY
                     TIKEQQSLISRLEDFAASDVEYYYGIFLHDTDELIGTINLFSILRESLQSAFIGYFLD
                     KEHNGNGYATEAVELIVDFGFDILGLHRIEAGVMPKNERSKQVLLKAGFHLEGLAVQN
                     VRINGNWEDHQVLAIINPGD"
     gene            10936..11838
                     /locus_tag="U0290_001183"
     CDS             10936..11838
                     /locus_tag="U0290_001183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEM2301228.1"
                     /translation="MNVNAETEDATLLLDGLLQNVAIIRFDTNKKVTYANALFAEAMG
                     YSEEEMLTLSHPDLCFPDFVQSASYKAMWTNLLAGQKFQNKIERKNARGERVWFEATY
                     IPIIREDTVVGVAKIATDITRREETVHDFASGLKSMATNLKEHSSVGKTRSEALLELV
                     KSITKESNENTDTLHDLQTEAQNIHGIINTINGIASQTNLLALNAAIEAARAGDAGRG
                     FSVVAEEVRKLSSRVEEAIKEVEKSVNGITQEINTISSGTERVEAKVEESQEVLILSL
                     EDFSQIESASTALDQNAGAFTKMI"
     gene            11866..12072
                     /locus_tag="U0290_001184"
     CDS             11866..12072
                     /locus_tag="U0290_001184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301229.1"
                     /translation="MKLIGKHPSGRAIIIRLNNQEYHYETANSFGSATSLTRAKTEAR
                     ADSFTSSEMNQGLHIGNWHWKELG"
     gene            complement(12112..12465)
                     /locus_tag="U0290_001185"
     CDS             complement(12112..12465)
                     /locus_tag="U0290_001185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301230.1"
                     /translation="MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQSDL
                     TEKTANPIEATHWVFYSETQAGDAIGDKVRSSIMVRHRDNKFVVHYNVSDFQFVTVFD
                     VATAFKDQLEQALNA"
     gene            complement(12494..12895)
                     /locus_tag="U0290_001186"
     CDS             complement(12494..12895)
                     /locus_tag="U0290_001186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fosfomycin resistance thiol transferase FosX"
                     /protein_id="HEM2301231.1"
                     /translation="MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKE
                     KFFLIAGLWICIMEGDSLQERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQG
                     EGRSIYFYDFDNHLFELHAGTLEERLKRYHE"
     gene            complement(12910..14289)
                     /gene="rlmD"
                     /locus_tag="U0290_001187"
     CDS             complement(12910..14289)
                     /gene="rlmD"
                     /locus_tag="U0290_001187"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEM2301232.1"
                     /translation="MNQNPVEEGQKFPLTIRRMGINGEGIGYFKKAVVFVPGAITGEE
                     VVVEAVKVRDRFTEAKLNKIRKKSPNRVTAPCPVYEACGGCQLQHVAYSAQLELKRDI
                     VIQSIEKHTKIDPTKLKIRPTIGMEDPWRYRNKSQFQTRMVGSGQVETGLFGANSHQL
                     VPIEDCIVQQPVTIKVTNFVRDLLEKYGVPIYDEKAGSGIVRTIVVRTGVKTGETQLV
                     FITNSKKLPKKREMLAEIEAALPEVTSIMQNVNQAKSSLIFGDETFLLAGKESIEEKL
                     MELEFDLSARAFFQLNPFQTERLYQEVEKALVLTGSETLVDAYCGVGTIGQAFAGKVK
                     EVRGMDIIPESIEDAKRNAEKNGIENVYYEVGKAEDVLPKWVNEGFRPDAVIVDPPRS
                     GCDQGLIKSLLDVEAKQLVYVSCNPSTLARDLALLAKKYRIRYMQPVDMFPQTAHVET
                     VVLLQLKDK"
     gene            complement(14354..14734)
                     /locus_tag="U0290_001188"
     CDS             complement(14354..14734)
                     /locus_tag="U0290_001188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEM2301233.1"
                     /translation="MTKPLKLVYTENGFDTGSFLIDDKLTEYSPADLMLMSIASCSAI
                     VFRNILKKKRVNFTDLWVDATMERIPEEENRISAIHLHFKITGAALDPKALEKALKLT
                     PKYCSMVRSVEKSILVDESLEIMP"
     gene            14841..15485
                     /locus_tag="U0290_001189"
     CDS             14841..15485
                     /locus_tag="U0290_001189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HEM2301234.1"
                     /translation="MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRI
                     LEMFYEDPKRWAFALQIYFLNTRFRSIKAALTDQNNVLDRSIYEDALFTQINFEEGNI
                     SEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQTFDNP
                     GLLDYYKHLHSRYDSWFESYDKSETLVINIDEIDINQPNDADYVMQLIHEKLKR"
     gene            complement(15515..16384)
                     /locus_tag="U0290_001190"
     CDS             complement(15515..16384)
                     /locus_tag="U0290_001190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEM2301235.1"
                     /translation="MWKKVVKYTKKNGIVQIGQTVSARVGRNDVSGNAAQLAYYMLFS
                     IFPMLLIAATLLAYLHIDKDSVFNMIKEFAPDQIMDFLEENLNNLLTQKNGGLLSIGI
                     IATLWSASNGMNAVMKSLNKAYGVTNKRNYVVQRLLSMFFTLAMLATVGATLLLLVFG
                     QQIGMFLINHLNFSEDFLSFWNNLRWTVTLIVIFVVFTFLYWVAPNRRSTLISVLPGA
                     LFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYLTGIILMIGGELNATL
                     AIRKKKKELGEIN"
     gene            16474..16695
                     /locus_tag="U0290_001191"
     CDS             16474..16695
                     /locus_tag="U0290_001191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465232.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1128 domain-containing protein"
                     /protein_id="HEM2301236.1"
                     /translation="MNLETPSQENLNFMLTEITTKLKMVNVGVFENLELDSVDYNALI
                     DIYQLIKRKSNFSPREMQLFAEELRRIRK"
     gene            complement(16715..17521)
                     /locus_tag="U0290_001192"
     CDS             complement(16715..17521)
                     /locus_tag="U0290_001192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465233.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAC(3) family N-acetyltransferase"
                     /protein_id="HEM2301237.1"
                     /translation="MGEKMAIWRTKKPATKQKIVSDLQESGIKKGDTIIFHASMSKAH
                     WICGGPVTVILALQELVGESGNIVMPAQTGQLSDPAKWENPPVPESWWKIIRRETPPF
                     DPLVTPTRGMGVIAETFRTMPDVERSFHPYHSFCAWGKDKKQILANQPLAKSMGDESP
                     LGKMYQLDAKIILFGVDNNNNTSLHLAEERSNVFPLIENQAAFLKNGEIIWEKYQEID
                     YNSEVFIALGRAYEKERDFHPTTIIGAPTKIYDMRDLVDFGTDYFQTKNH"
     gene            complement(17647..18405)
                     /gene="map"
                     /locus_tag="U0290_001193"
     CDS             complement(17647..18405)
                     /gene="map"
                     /locus_tag="U0290_001193"
                     /EC_number="3.4.11.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I methionyl aminopeptidase"
                     /protein_id="HEM2301238.1"
                     /translation="MITLKSRREIDEMKAAGKILADTHKELKKIIKPGITSWDLEVFT
                     EEFLRKNGATPEQKGFEGYEYAICASINDEICHGFPRKQKLNQGDIITVDMVVNYRGA
                     LADSAWTYAVGEVPDDVKHLMDVTHKALYLGIEQAQVGARVGDIGHAIQTYVESENLA
                     VVREFIGHGVGPTLHEKPDIPHYGTAGKGPRLKEGMVITVEPMVNMGAWKAKMDDNGW
                     TARTVDGSLSAQYEHTFAITKDGPEILTYQGEND"
     gene            18593..19039
                     /locus_tag="U0290_001194"
     CDS             18593..19039
                     /locus_tag="U0290_001194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465235.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HEM2301239.1"
                     /translation="MTKVMIVYASMTGNTQEIADILGEELEKYDIEVEIEECISVDPE
                     DLLEYDGALIGGYTYDDGQLPDEFVDFYEDMADVDFSGKVCASFGSGDTFYDEYCLTV
                     DLIETRLKEQGATVPVAGLKVDLDPDEEDVVRAESYAKTFVDVLKG"
     gene            19177..20409
                     /locus_tag="U0290_001195"
     CDS             19177..20409
                     /locus_tag="U0290_001195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465236.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminopeptidase"
                     /protein_id="HEM2301240.1"
                     /translation="MTVFSEKLEKYAELIVKVGVNVQPEQKVVIMAPVDAAPLVRLIS
                     KYAFEVGAEDVIMDWRDEELGALRYKNAPLRVFESAPVHRVAEKTELAKEGACFISIT
                     SEDPDLLNGVDSNKIATFQKTMGGAMSEFRELMQANVVSWTVVAAASQGWAAKVFPDL
                     TPAEQMETLWEAIFETTRINTENPVETWKNHDQTLAAKAESLNEKQFTSLHYTAPGTD
                     LTIGLPKNHLWVGAGSKNKKGHEFMANMPTEEVFCCADKLKVEGYVSSTKPLSYAGNI
                     IDDFKITFEKGRIVGVEAASGEEILKDLIATDEGSHYLGEVALVPDPSPISQSGILFY
                     NTLFDENASNHLAIGSAYAFNVKGGEEMSREELEAAGVNNSLTHVDFMIGSSEMDIDG
                     VTESGEVVPVFRKGDWAF"
     gene            20513..>21678
                     /locus_tag="U0290_001196"
     CDS             20513..>21678
                     /locus_tag="U0290_001196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2301241.1"
                     /translation="MKFSTWDINLKVRLFGEALLDISFWMVFPFLTIYFSESIGRELT
                     SLLLIISQVLAVFTALLGGYFADNFGRKRMMSISVIGEGFGFLVFAIGALHVVDSPYL
                     SFAGFAIASVFMAFYQPASQAMIADVVPPEHRTHIYSVFYMMINIAVVIGPILGSVLF
                     YNFTTETLLAIVCADLLLLFLLQKFGHETAPLLVNPDLQKEAVRKSIGAVLMEQLKNY
                     KIIFKDKIFFLYIVAGIIVSQSFMQLDLLFPLYIKEVIGASNLFVFHFTGEQLFGVIV
                     SINGFFVAALTVVVTRWMSHFREKFVFMNSSFLYAIAIFLFGISTGPWGAICAIILFS
                     FAELMTVGLQQTFVSQLAPEDKRAMYFSAAGLRYTLGKVIAPLAITLSTLIGYTG"
BASE COUNT         6402 a         4139 c         4054 g         7083 t
ORIGIN      
        1 tgcaaaaaaa caatatcgtg ctgaaacgga atattttcct caaaaaagaa ctttttttac
       61 ataaaatagc taatttttac ctattttgtt ttactatact aaaagtgttc tgccgccatc
      121 tactaaaata gtttgcccgc gaatcatatc tgctttttcg ctcgcaagga ataatacggc
      181 atttactaag tcattgggct caatcattcg acccgctggt gttttactta tagcatcttt
      241 taacaattct tcacgattgg gaaagtgatt tagtgcgtct gtttcaatta agccgccaga
      301 aacagcatta actgcaatgc caaaaggtgc aagttcaact gctaaatacc gagtaagtga
      361 ttctaccgcc gcttttgaaa cgccaactgt tgtgtaattt tctaaataac gaatcgagcc
      421 aatcgagctt aagctgatga ttttcccgct ttgatggcgt tgcattaatt tagctgcttc
      481 ttgacctgca aacaacagcg cttttgcgtt aatattcatt gtccaatccc aatgtgattc
      541 ctctaactcc atcaatggtc gaaggacacc acttgctgca ttgttaataa aaatatctaa
      601 tcggccgaat tcctcatcta cagctttaaa taagtctcta attttttcca cgtcaccaac
      661 atttgcttta aaaataacgc attttcttcc taattgttca atttcttgtt gtacttcttc
      721 tgcttttttg cgatttctgg aaaaattaac agcgatatca tagccttcat ttgcaagtgc
      781 gatggctatt tctcttccaa gtcctctact acttcctgtt actaatgcca ctctattcat
      841 ttgttattcc cccttaaaat ctttccacgc ttgccacatt ttttgatatg gtactggaaa
      901 agcaagtcgc ttcatttctt cttctgttgc aaaataccaa ttttcatttg gaattgctga
      961 ctgaagtttt gccacacgaa tgtccatttt ccatactaaa tgagaaaaaa cgtgtttgat
     1021 atgcgcaatt ggttcgtctt ctagtaaaac gtctaagcca taattatgta aaaattgtag
     1081 tttagctact tcctcatttt cttttttcga aatttcaata gtaggaaatt gccacatatt
     1141 tgcaagcaaa ccattttctg gtcgtttctc tatggcaatt tttccgtcct ctgaaataac
     1201 aatgatgctt aatagttctt tggttttcgt tttcactttt tttattttta ctggataatt
     1261 cgtttcaacg ccatttttat gcgcttcgca aaacggttgg agcggacaaa gcatacacat
     1321 tggttttgtt ggtgtacaaa caagcgcacc aatttccatt aaaccttggt tgaaagcggc
     1381 tggattttct ttgtcaatta gttgatataa cacttcttca aaaattttcc gggtggacac
     1441 tttcatgatg tcttcactaa tttctaaaac gcgcgcgatg acacgcataa cattgccatc
     1501 cactgctggt tcagcttggt tgtaggcaat actcaagata gctcccgctg tatatggacc
     1561 tacaccttta agcgataaaa tagtggttaa gtcggtagga acttttccag aaaaatcggc
     1621 catcacttgc ttcatggctg tttggaggtt tctgacacga gaataatagc ctaagccttc
     1681 ccacgctttt aaaatatccg cttcatccgc ttggacaaaa tcttccatcg tcggaaattg
     1741 agtcataaag cgattaaaat aaggaattac tgtgtcgact tttgtttgtt gaagcatgat
     1801 ttctgagacc caaattctgt aaggatcggt attttcgcgc cacggtaaga cgcgcttatt
     1861 cgcttcatac caggaaacga gtgcttcttg aaaagcagtt atctttgttt catcccaagt
     1921 tagtctcttc atttttctca ttttcccctc gtaattctaa tagatttcta atgtgtgttg
     1981 ctccggatgt gtagtataat gtagacaggg aataaaatag tatacccatt cttaagccga
     2041 tttctattat accgaatgct ggcttgattg aatagtgttg tgctcttaca ggcagcacca
     2101 cttgtatttt ttaagaccga ttttagagga ggcaaagtca ttggatactg gcacacatgt
     2161 agtaatggga attgcactcg gagcgttagc aaccgtagac ccggtagttg ccggaagttc
     2221 tcaagctgcc attggtatta tgacagcaac aattattggt tcacaaattc cagatattga
     2281 cactgtacta aaattaaaaa acaacgctga ttatattaga aatcaccgag gaataacaca
     2341 ttccttgccg atgcttgcaa tttggccatt acttatttca tctgttttgt atttactttt
     2401 cccagcagca acatttattc atttactgtt atggacgttt atcgcggtgg gattacacat
     2461 ttttgtagat atttttaatg cttacgggac acaagcagtc agaccgttta aagaaacatg
     2521 ggtcgcattt ggatttatca atacctttga ttggttcatt ttcggttctc atgttgtggc
     2581 tattgcggct tggttgttag gttctcctgt attagctaca tttgtaacac tctacgtcat
     2641 tttagcactt tattatgtgg cgagatttgt tacacaacga atgattaaac atgcggttca
     2701 aaacttaatt ccagattcag aagaaatcat tattgcttcc accatccact tcttccagtg
     2761 gcgtgtggcg gtaacaacca aagatcatta ctatgtaggt cgagctttca aacgcaacat
     2821 ctctatctac gaaaaatttg accgattacc tgttcctgat aatgaaatca tccgttctgc
     2881 gaaaaaagat aaaaatctag ctgcttttat ctcattctcc aaagtttaca actggcgcat
     2941 tgaggaaaag ctagatggga cttatgtaac atttaccgat ttacgttatc gtagcaatgg
     3001 acattatcca tttgtagcag tggtgaaatt agatgatgat ttaaaaattg tttcatctta
     3061 cactggttgg attttctcca cagaaaaatt atacaaaaaa ctagcacctg ttagtattta
     3121 aaaaaagacc cggaatcccg ggtctttttt tatctgcctg tacttcctac cccaccaaca
     3181 cgggattcgt ttgcgacaat atctgtatct gcaactaagt atttttgaaa tacgccttga
     3241 gcaacacgtt cccccgcttc aatagctact gcttcattgg agaagttttt aatggcaatc
     3301 ccaatattgc catcattacc tggattacta taataagaag aatcaataat tcctgtaccg
     3361 ttacatagaa gtaaaccttt ctttatacca atggaagaac ggacatagat attcaaaacc
     3421 tcctcttcct gcatataact tttaatatct gtccaaaaaa tgtgtttttc tcctggtaag
     3481 atggttactg tttcattaga gaagaaatca tagccggccg aacctttgtc cccgcgtatt
     3541 ggtaaagata ttgtttgttc cggaaatttt ctgcttgctt catttactac ttcaaatcct
     3601 cttactttca attcgttcac tcctatttgt ttgggtcttt tcgttctact tggtgtaaaa
     3661 aactgccgtg gcgctcgatt tgctgacgga cataatctgc cgcgtactct ggaccacgat
     3721 acgggtaacc tgctttagca tatgaacttt caaaatctga ccaaagcatt tcaatccacc
     3781 acaaggcttg ctctttatct aaatgcggat ttttagtcat taattccgct gttagttcat
     3841 ctaaatacgt atacaattca ctcttcctcc tcgaaactga tttcattttc agttaggtat
     3901 gattgaattg tatcataaga aaaacctttc tgcattagcg atgtgattgt tttttgtttg
     3961 gcaatgcttg gtttgtagcg tttattttta cgcattgttt tttcgatttg cttttgtaaa
     4021 atttctgctt cgtccgccac atccaattcg ctcgttgctt cagtagcggc tactttggct
     4081 agttcgctcg tatagccttt ttggattaaa tccgtgataa ttttttgttg aagcattttt
     4141 ttggcgcttt tgttatttcg cttcataatt tttattgctt gtttggtggc attttctagc
     4201 tgagcttcat ccgaatattc ttcgataact tgagtaatta tttctctagt tagtcctttt
     4261 tcgactagtt cgcgttcaat ggtccgcgga ccttttaggg ttgttttgat ttgcgttttc
     4321 gtatacagtt ccgcaaattc gagatcatta atataatcca tgtcggctaa tttttttaaa
     4381 atctcgtcaa ttgcaaaagc ttccatttct tgctttctta aataatcgcg aatttctttt
     4441 tccgagcgaa cacggtggga taagaagttg atggctttat ttagcccttt tcgaaccata
     4501 tcagcttgct taatttcttc tatttcggcc tcggttagaa ctttaccttt catcagctgg
     4561 tagcgggcta aaacctcttc gtctacgcta aagttgtatt tttcatcaat aaaaatgttg
     4621 tagcgttctt tgtttttctg ctggacactt atggacgtga ttttcataat ccgcctcctt
     4681 ctcctatcta tcataccgca aaaattggtt ttaatactac taaaaaggga ataaactagt
     4741 taggacaatg aagaggtgat aaaattgcat atcttactta caggcgcaac aggttttatt
     4801 ggtgatcatt tagtgcatga attagaaaaa tctgatcacg agctttatat tttaacaaga
     4861 caaaagctaa aaaaccgcgc aaatgtacac tatattgaat ggttaaatga agataaattg
     4921 ccgaatttag aagatttacc agtggatgtt tgtattaatt ttgctggtgc tggtttgatg
     4981 gatgaaaaat ggacttacga tagaaagaaa gtgattgtaa atagccgcat cgaagctact
     5041 tcagcactct tatcgattgt gaaaaaaatg aaatcaaaac caaaattgtg gattaatgca
     5101 agtgcaattg gagcctacac ttcctccaag tcaacgattt atctcgatac agaagaaaat
     5161 aattacgcag ataacttctt aggaaaaaca gtctatgaat gggaaaaaac agcgagtgcg
     5221 gcaagtgatt tgggtattcg tgttgtttat gctcgctttg gtcttgtact tgggactgat
     5281 ggtggctcgt tccctgtttt cgaaaaatta ttccaaactt atacaggggg acgctttggt
     5341 aacggcagac aatggtattc ttggattcat gtggatgatg ttgtggcggc aatcttattt
     5401 atttttgacc acgaacaaat aaacggtgtt gttaatttta cagcccctca tcctgttcaa
     5461 gaaaagaaat ttgctgaacg ccttggaaaa aaaatgcata aaccgtataa aactcctgtg
     5521 cctaaaaaaa ttattaaatt cattctaggt gaacgtgcca tgactatttt ggacagtcaa
     5581 cgtgcttatc cggaaaaact gatgagtaac cattttgaat ttcgctttga aacgttacaa
     5641 gaagctttag atgacttatt agattgataa aaaaccagat tctgatttta ctcagaatct
     5701 ggtttttttg tttcttcttc aagcgggaaa tcaaggacta cttgactatt tgcaagtggt
     5761 ctttttttac caacaagaat cattaattgt aacatggtga aagcaataga acttcttttt
     5821 ctaaaggcaa caaatttttg ttcccattct gtaacatatt tggatttaaa attacgcagt
     5881 cctttgaagc cgtaaaaacc ttgactatag cggtatacca gtccggctaa tcgttcacct
     5941 aggaaagcat atttactttc tccaacattg gcaagcggcg ccataccggc attaaatgtt
     6001 tggaagccgt cttctttagc tttttcgaat agattaatga aaaggaaatc cataatacct
     6061 gatggtgctt ctttagagta tcgcattagg tcaatcgaag tcatctcttc tgtatatgac
     6121 ggcatcatcg aagcaaatcc aacgacagta ccttctccgt ttttagcgat agcaatcgga
     6181 gcttgttcga gataatacgt atcgaaaaat cctaatgaga aacctttttc ttctcttcca
     6241 tctagccact catcagaaac tgctcgtaaa gttgtccaag tctcgtgctt gaatggtggt
     6301 tctattattt caaaagtata accttctcgt tctaatttat tcatgagagc acgctcacct
     6361 tttttctttt taccactcat tgtaaagttt tgaacgtcga caaaaccttc ctctccaagc
     6421 ttgataaagt caaatccgtg atcatgtaaa tatggaatca tcgtgcctcg aacttcatag
     6481 aaaacaggtc gatagccaaa tctgtcagcg ttcatcataa cctcttcaat cgctgcttcc
     6541 attttgtcca tattcccagt tggttcgccc atgatgacca ttttgtccgc caagattcgg
     6601 taagagaaaa gtacttctcc attagccgcc caaaaaagta gtttatctcg taagaacatc
     6661 gtatgactga cttcatttcc gccccatttc gctaaatgtt cacgtacttt gacagcttca
     6721 aatggagaac ctaatttttc ttttgttgtg gataaataaa tataaataat gactaaacta
     6781 acaacagcaa taaatacgcc aacaaaacca actaaccata aatgttctga ggcaatgcgt
     6841 aaatagtcag gaatttcttt ggaatgtttg atatttggtg agttgtaaat accaataaca
     6901 atgtaacctg ctagacatac gatgaaaata atgctatcca taattacttt actccatgta
     6961 taaactagtt tttctcggta aaattcgttt cgagctaaga ataaacataa tagcacaatt
     7021 cctaaaaaga tcgcctgctt catcgaaaat acgcgagcaa gtgtgttgaa aatcgcgcaa
     7081 cctagaacaa ttactgtaat aatatacgct ttctttgttt tacattcaat tcctctcgca
     7141 agtcccagta gtaaaaagcc aaatgcaacg atggtaattt gggaagtgaa taagaaatta
     7201 aacggcataa ttttgtataa gaaaggcaca tggtaaatgg cgtttggaac ggcggaagat
     7261 aaaatcaaca ataatccgga accgtaaaca aaaataacta agaagcgatg agccactttt
     7321 tgtaaaaata atagcggtaa cccttcaaga aagtcattta cttttttacc agctttttgg
     7381 acgaagaaaa gtaatcccac tacaaaggga ataatatagt agaaaattcg gtaaaatagc
     7441 atccaagcga gcgctaattc ttgagaaacg cctaattggc taagtcccag aatcatcacg
     7501 acgtcaaatg tccctactcc accaggtacc atcgaagcaa tcccaattac cgaagcgata
     7561 acaaataatg ggaacacttt gaagatatcg actggttctc ccatcaatgt accaataatc
     7621 gcgaaacatc caaaagcgaa gccccactcc aaaagagagg cgataattaa cgttaattct
     7681 cttttgatag gtaaatcaac aaaaagtgac ttacttttcc atttcgttat tgtaaataag
     7741 attgggaagt aaagaccacc cgcaagaagc catggccagt aattaacaaa atgatttgca
     7801 aatcctggaa tgagtaaagt ggctaatgat actaaacagt aaatcgataa accagatact
     7861 aaaaataaag caatcttaga aatagcgagt aatatttctt tatgagatgc attttttccg
     7921 taaaaacttg ctcttaaact ggcacctaat acgccaccaa aaccaccaat attagtaaat
     7981 gtattcgtaa tccaaccaga ggcaatcaca tgacttgggg aaaactttcc aggcaacaac
     8041 ttaacgatga cataatcata caatagcatt ggagtgacag caattaagcc aacaataaac
     8101 ataataaata tttgttctgg actttgagaa gttaaatttt cttttagcga tggatagtca
     8161 attcccgtcg caatattaat aatttcaaaa ataacaaaag ccatcacaaa agtaataaaa
     8221 acgattttta cgacggtact atttttttga aaccaggcat aggcttgcat taatttttct
     8281 ttcataacag agtctcctta acgatttcca ttcatcttct tttattgatt cgttttctaa
     8341 cagatggtac agcataagct agtagaatgc ctattaatcc acttaacgta tttaaaatga
     8401 tatcatctat atctgtagaa cgttttggtg gtagcgatat actttcaaat cctgtaatca
     8461 tcgttgtttg cgcaaattga agtagttcga tgccgcaaga tgttaagaat atgactaata
     8521 atgtttttcc cgcagtgctt gttattttaa agtaaagcat gaagaaagac agtggacata
     8581 acaataaaac attccctaaa atttgaataa tagtaggcat cgttggtaat gtttgctgaa
     8641 atgtattttc tatggtggta aaaggtatta agttaatcat ttctttttga atatggaaat
     8701 tcccagtata agtactgttt acgaaatccc caacagctat gtaagccaca aggtgtaata
     8761 agataattat atatagaata aaaacgcaaa accatataaa gtctatccaa ttctttagtc
     8821 tcgccatgtt ggttagtatg atggttgcta aaaaaagtaa gcaactattt gcaatggtat
     8881 tgattaaatc tgcgttattc ccaaattgta gtgcaagcga aatcccgtac aagagatata
     8941 acgctggcaa taacaacaca aaaaaacggc atttttggac ctgcattctc gtattccaac
     9001 gccttccgtt tcaaaatcag ctctcagact ctctgaataa gctcctagta tcagtttagc
     9061 agatataaaa atgaaaagaa agcttgtttg tgcttacatt tttgcaagct tctgtaaggc
     9121 tttcgggttc ttattttctt tttggtaaaa aaagtgctac aatttcttaa tgatatttgt
     9181 ggaggagact aggatgaaag aattattagg gttattaaaa gaaggtaaca aatccgcctt
     9241 aacagcggct cttgttaaca ccgttgtttc tattattaaa ggtattactt atttttttac
     9301 aggaaatatc gccatgttcg cggaaacgtt acatagtctt ggagatgcag caaatcaatt
     9361 ttttgttttc atcggctctg ctttaagtaa aaaacggcca acaaaacgct ttccacatgg
     9421 tttcgggcga atggttaact tagtgctact tggtgctgtc attgttgttg ggataatggc
     9481 ttttgagacg attcgtgaag gttttgcgca tattatccat ccaacaagtt ccactggttt
     9541 ccttataaac cttactgtgc tcctactttg taccgtgcta gaattttctg ttttagtaaa
     9601 agcaatgcat gagattgcgc acgatgttgg cttagaatca aaaggacttc gcttatttaa
     9661 agacagtatc ctaaatctag gtaaagcaaa agctgcaacc aaactcgtat tcttggaaga
     9721 ttccgttgca actggtggtg gacttcttgc gatgattgcg gttattattt ctcactttac
     9781 ccctttccat caagcagaag gtattgcatc catgttaatt ggtgtaatga tgtttatcgt
     9841 cgttggtaaa gtctttttgg acaatgcggc tggagttatt ggcgaatcag atcaaagtat
     9901 gcatttaact gtcggtcagc tcgtaatgag tgatcctgat gtgcgcgata ttcaagttct
     9961 aaccgttctt aaagaaggcg atgttttcca tgtcgatgtg gaagtggaat tagatcccat
    10021 gctcaccctc gctgaagtgg acgatattaa agaccgtttg gaagaaagta tcggaaaatt
    10081 acgcggtgtt gctgatgtac ttatttcatt tgatgaagat gatgccatcc gtaactggga
    10141 atatggggac ggacgttaaa aatagaaaaa gccaagtgcg cggactgcga cacttggctt
    10201 tttttagtct ccaggattaa taattgctag gacttgatga tcttcccaat ttccatttat
    10261 gcggacattt tgtactgcga gcccttctaa atggaagcca gcttttaaaa ggacttgttt
    10321 ggaacgttca tttttcggca ttactcctgc ctcaattcgg tgcaggccaa gaatgtcaaa
    10381 accaaaatct actatcaact ccactgcctc ggttgcataa ccatttccat tatgctcttt
    10441 atccagaaaa taaccaataa acgcagattg taaagattcc cgcaaaatac taaataaatt
    10501 aatcgtacca ataagttcat ccgtatcatg gaggaaaatc ccataatagt actccacatc
    10561 actcgcagcg aaatcttcta atcgtgaaat aagcgattgc tgttctttta tcgtataaaa
    10621 acgatcatcc cgctccatag aataaccttc aaaaaaagct ttattcgcta aatgaaaagc
    10681 tagtttttga ttggcatctg ttatttgaaa aggtcttaag taaatccgtt cccccgtaat
    10741 ccgcatcctt atccctcccg catttttcta aattataaga ttgttctgat gtgattgcaa
    10801 gtatcactgc taagcttaat ttttctatat acccatttta ttaaaaaata aacttcccat
    10861 tacgaataca tgtgtgttat tatgttgatg ttggttgttt ttatattatt tttctaaaaa
    10921 atggaggttt ttttaatgaa tgttaatgcg gaaacagaag acgcaactct ccttctcgat
    10981 ggtttacttc aaaacgtggc aataattcgt tttgatacta ataaaaaagt aacttatgct
    11041 aatgcccttt tcgcggaggc aatgggatac tcagaagaag aaatgttgac tttatcccac
    11101 ccggacttat gctttcctga ttttgtccaa agtgcaagct ataaagcaat gtggacaaat
    11161 ttgcttgctg ggcaaaaatt tcaaaataaa attgaacgaa aaaatgcacg cggtgaacgt
    11221 gtttggtttg aagcgactta tatcccgatt atacgtgaag atacggtcgt tggagtagcc
    11281 aaaatcgcta cagatattac gagaagagaa gaaacggttc atgactttgc atctggttta
    11341 aaaagcatgg ctacaaattt aaaagaacat tccagtgttg gaaaaacgcg cagtgaagct
    11401 ctccttgaac tcgtgaaatc aatcacgaaa gaatccaatg aaaataccga tacacttcac
    11461 gatttgcaaa cagaagccca aaatattcac ggcattatta atacaattaa cggtattgct
    11521 tctcagacta atttacttgc cttaaatgca gcgattgagg cagcacgtgc tggtgacgcc
    11581 ggacgtggat ttagtgttgt agcggaagaa gttcgtaaac tttcgagtcg tgtagaagaa
    11641 gcaattaaag aagtggaaaa aagtgtcaac ggtatcacgc aagaaattaa tactatctca
    11701 agtggtacgg aacgtgtcga agcaaaagtc gaggaaagcc aagaagtgct tattttatct
    11761 ttagaagact ttagccaaat tgaatctgcc tctactgcct tggatcaaaa tgccggtgct
    11821 ttcacaaaaa tgatttaacc gactgaaaaa aggagcgaag aaaccttgaa acttattgga
    11881 aaacatcctt ctggtcgtgc cattattatc cgtttgaaca accaagaata ccattatgaa
    11941 accgcaaata gttttggaag tgcgacttca ttaacacgag caaaaacaga agctagagcc
    12001 gatagtttta catctagtga aatgaaccaa ggtttacata ttggtaattg gcactggaaa
    12061 gaacttggat gaacgaaaat cccgtctata aaaatagacg ggatttttta tttacgcatt
    12121 caatgcttgt tctaattggt ctttaaaggc ggttgccaca tcaaatacag taacaaattg
    12181 gaaatcgctc acgttgtaat ggacgacaaa cttattatcc cggtggcgaa ccataatgga
    12241 agagcggact ttatcaccaa ttgcgtcccc tgcttgggtt tcgctataaa aaacccagtg
    12301 agttgcttcg attggatttg ctgttttttc tgtaaggtcg ctttgaatga gttgttttat
    12361 ttcatcactt aattctggcg cgaattcatt gtcgatgtag ccgtaccaaa tagttcggta
    12421 gtactttgct tcaaattcat tcgtttcatc aaatagtttt ttcatgtttg tttcctccta
    12481 ttaggtgtta tttctattcg tgataccttt ttaagcgttc ttctaatgta ccagcgtgta
    12541 attcaaacag atgattatca aaatcataaa aataaatgga acgtccttca ccttggactc
    12601 tgggacgttc tggtttcatt tccacaccga gagctttaat ccgctcagta tattcatcca
    12661 cttcctcgga ttgaatttgg aaagcaatat gattgtaagt tcgctcttgt aaagaatctc
    12721 cttccataat gcaaatccac aaaccagcta ttagaaaaaa tttttctttg gaaagcgaaa
    12781 atgttttgtc gccactagaa tagatttctt ctgcattaaa aatattctgt aagaaagcag
    12841 ttgttttatt caaatctttc acaattaaag tgatatggct taatcctgaa atcatgtacc
    12901 accagtcctt tatttatctt ttaactgcaa gagtactacg gtttccacgt gagctgtttg
    12961 cgggaacata tcgacgggtt gcatatagcg aatgcgatat ttcttcgcga gtaaagctaa
    13021 gtcacgtgct aatgtggatg gattacagga tacataaaca agttgttttg cttccacatc
    13081 tagtaatgat tttattaggc cttggtcaca gccgcttctt ggtgggtcaa cgatgactgc
    13141 gtctgggcgg aaaccttcat ttacccattt tggtaatacg tcttctgctt tcccaacttc
    13201 ataataaaca ttttcgatgc cattcttctc ggcgtttcgt ttagcgtctt caatggattc
    13261 tggaataata tccataccac gaacttcttt tacttttccg gcaaaagctt ggccgattgt
    13321 tccaacaccg caataagcat ctactagtgt ttcactgcct gttagtacga gtgctttttc
    13381 gacttcttga taaagtcgct ctgtttggaa cgggtttaat tggaaaaagg cacgagcaga
    13441 tagatcgaat tctagttcca ttaatttctc ttcaatgctt tcttttcctg ctaaaaggaa
    13501 cgtttcgtca ccgaaaataa gtgaggattt tgcttgattc acgttttgca taatcgaagt
    13561 gacttccgga agagctgctt cgatttctgc aagcatttcg cgttttttag gtaacttttt
    13621 actatttgta atgaagacga gctgtgtttc gccggttttc acgccagtac gaacgacgat
    13681 agttcggacg ataccactgc cagctttttc atcataaatt ggcacgccgt atttttctag
    13741 taagtcgcga acaaaattcg ttactttgat ggtaacgggt tgttggacga tacaatcttc
    13801 aattggaaca agttggtgag aattggcacc gaaaagccct gtttcgactt gaccactgcc
    13861 taccattctt gtttggaatt ggcttttatt acggtaacgc catgggtctt ccattccgat
    13921 tgttgggcgg atttttaatt tggttggatc gatttttgta tgtttttcga ttgattgaat
    13981 aacaatatct ctttttagtt caagttgggc gctataggcc acatgttgca actggcaacc
    14041 accacacgcc tcgtaaactg ggcaaggtgc ggtaactcgg tttggagatt ttttacgaat
    14101 tttatttaat tttgcttcgg tgaaacgatc acgaactttg accgcttcga caactacttc
    14161 ttcaccggta attgcgccag gtacaaatac aactgctttt ttaaagtagc cgattccttc
    14221 cccgttgatt cccatgcgcc gaatagttag cgggaatttt tgtccttctt ctactggatt
    14281 ttgattcatt attttcctcc atcattccaa gtcttcatta atactaacaa aaaaacagca
    14341 gcttgtcagt agtttatggc atgatttcaa gactttcatc gacaaggatg cttttttcga
    14401 cagaacgaac catcgaacag tatttcggtg ttaattttaa tgctttttca agtgcttttg
    14461 gatccaaggc agcaccggtt attttaaaat gaagatgtat cgcgcttata cgattttctt
    14521 cttctgggat gcgttccatt gtggcgtcta cccataagtc ggtaaagttt actcgttttt
    14581 tctttaaaat gttacgaaaa acaatggcgc tacaactggc aatagacatt aacatcaaat
    14641 ccgctggtga atattcggtc agtttgtcat cgattaaaaa acttcctgtg tcaaacccat
    14701 tttcggtata aactagcttt aatggttttg tcatggttat ccctcatttc ttctctttta
    14761 tcgtacaaaa aatctcctta ttaagcaaat tagtagtata atgaacagat agtcgaccaa
    14821 aaaaggaggc tactcatgtt atggaaggag taggaaataa agtgattgtt ttagcaggaa
    14881 tgattggtgc tgggaaaagt agctatacag agctaatcgc aaatgaactc ggaacaaagg
    14941 cattttatga aagcattaag gataaccgca tccttgaaat gttttatgaa gacccaaaaa
    15001 gatgggcttt tgccttacaa atatattttt taaatacccg ctttcgtagt attaaagctg
    15061 cgttaacgga tcaaaataat gtgcttgatc ggagcatata cgaggacgcg ctttttacgc
    15121 aaattaattt tgaagaaggt aacatttcgg agcctgagat ggatacatac cttgatttac
    15181 tcgacaatat gatggaagaa cttgcttata tgccgaaaaa agcgcctgat ttgttgattt
    15241 atttgcgagg aagtttagac actgtattga gccgaattgc tctccgtggt cgtccttatg
    15301 aacaaacctt tgataatcca ggtttacttg actattacaa gcatctgcat agtcgttatg
    15361 acagctggtt tgagtcttat gataagagtg aaacccttgt tattaatatc gacgaaatag
    15421 atattaatca accaaatgac gcagattatg tcatgcaact tattcatgaa aaattaaaac
    15481 gctaaaacag gctttttgct gttttagcgt ttttttaatt gatttcgcct aattcttttt
    15541 tctttttccg aatcgccagt gtagcgttaa gctccccgcc aatcatcaaa ataatgccgg
    15601 tcaaataaaa ccataacatt aaaataataa ttacaccgat actgccatat gtggctgaat
    15661 agttgccgaa attatttacg taatacgcaa aacctagcga agcaactgtc caaccgattg
    15721 ttgaaaaaag cgctccaggt agaacactaa tcaacgtact gcgccggttt ggtgcgaccc
    15781 aatataaaaa ggtaaatacg acaaaaataa cgatgagtgt aacggtccaa cgaagattat
    15841 tccaaaagct aagaaagtct tccgagaaat tcaaatgatt aattaaaaac atccctattt
    15901 gttgtccaaa tacaagtaat agcaaggttg cccctactgt cgcaagcatt gcgagtgtga
    15961 aaaacatcga taataatcgt tgcacgacgt agtttcgctt attggttacg ccatacgctt
    16021 tattgagcga tttcatgacc gcattcatgc cattcgaggc cgaccataaa gtcgcgataa
    16081 tcccgataga aagtaatccg ccatttttct gcgttagtaa gttatttaaa ttttcttcta
    16141 aaaagtccat aatctggtct ggcgcgaatt ctttaatcat attaaaaacg gaatctttat
    16201 caatatgaag ataggcaagt aatgttgccg cgattaagag cattggaaaa atcgaaaaca
    16261 gcatataata agctaactgt gctgcatttc ctgaaacatc atttcgacct actctcgcac
    16321 ttactgtttg gccaatttga acaatcccgt ttttctttgt atatttaact acttttttcc
    16381 acactgataa ggccccctgt tctagtcatt cgtctggaag tttttcttct actatggtaa
    16441 aattttgtct attagcttga aaggagcaaa aagatgaatc ttgaaacccc ttcacaggaa
    16501 aacttgaatt ttatgttaac cgaaattaca acgaaactaa aaatggtgaa tgttggtgtt
    16561 tttgaaaatc tggagcttga ctctgttgat tataacgcac ttatcgatat ttatcagcta
    16621 attaaacgta aatccaattt cagcccgcgt gagatgcaat tatttgcaga agaattacgc
    16681 cggattcgca aataaaacaa attccagcca ctttttagtg gttttttgtt tggaaataat
    16741 cggtaccaaa atccactaaa tcacgcatat cataaatttt cgtcggcgct ccgataatcg
    16801 tcgttgggtg aaagtcacgt tctttctcat aagcgcgacc taacgcgata aacacttcac
    16861 tattataatc aatttcctga tacttctccc aaatgatttc gccatttttt agaaaagctg
    16921 cctggttttc gatgagcgga aatacattgg agcgttcttc cgctaaatga agcgatgtat
    16981 tgttattatt atctaccccg aacaagataa ttttcgcatc aagttgatac attttcccta
    17041 gcggcgattc atctcccatg cttttcgcaa gtggctggtt ggcaagaatt tgttttttat
    17101 cttttcccca agcacaaaac gaatggtatg gatgaaaact acgctcaaca tctggcatag
    17161 tacgaaatgt ttcggcaatg acacccattc cacgagttgg tgttacaagc ggatcaaatg
    17221 gcggtgtttc tctgcgaatt attttccacc aactttcagg aactggcgga ttttcccact
    17281 ttgcaggatc acttaattga cctgtttgag ccggcattac tatattgcct gattcaccaa
    17341 ccagttcttg caatgccaaa ataacggtaa ctggaccacc gcaaatccag tgtgcttttg
    17401 acatggaggc atgaaaaata atcgtatctc cctttttaat acccgattct tgtaggtccg
    17461 acacgatttt ttgttttgtt gctggctttt ttgttcgcca gatagccatt ttttctccca
    17521 ttgtatgtca ccgcctctaa aaataaagcc agatgcctag aaaaaaacgg caaactaaaa
    17581 gcagctgtgt gaaacttgtg cttttacttg cattctgttc taaatgcatc tggctaaata
    17641 gtttaattaa tcgttttcgc cttgatacgt taaaatttct ggaccatctt ttgtgattgc
    17701 aaaagtatgt tcatattgcg cagacaaaga gccatcaaca gttctagcag tccagccatt
    17761 atcgtccatt ttggctttcc aagcacccat attgaccatt ggttccactg taataaccat
    17821 gccttctttc aagcgaggtc ctttgccagc tgtaccgtaa tgtgggatat ctggtttttc
    17881 atgtaaagtt ggtccaacgc cgtgaccaat aaactcacgt acaacagcaa gattttctga
    17941 ttctacatat gtttgaatag catgaccaat atcgccaact cgtgcgccaa cttgtgcttg
    18001 ttcaatccct aaataaagtg ctttatgcgt tacatccatt aaatgtttca catcatctgg
    18061 cacttcacct acggcataag tccaagcaga atcagcaagt gcaccgcgat aattcacgac
    18121 catatctact gtaataatat cgccttggtt aagcttttgt ttgcgcggga agccatgaca
    18181 aatttcgtca ttaatacttg cacaaatagc atattcataa ccttcaaagc ctttttgctc
    18241 tggagtcgcg ccatttttac gtaaaaattc ttctgtaaat acttctaaat cccagctagt
    18301 aatacctggt ttaataattt ttttaagttc tttatgcgta tcggcaagga ttttccctgc
    18361 tgctttcatc tcatcgattt cgcgtcttga tttgagtgtg atcatctttt cattccctcc
    18421 taaaatttcc actatttact attatagctc gaaacccctt agaaataaag taatctggaa
    18481 aaaaggttgc agtttttctg aagacattta taatagaatg tatcagttaa aaaatggtgg
    18541 gctggtttgt gccattttaa acaataaaaa attcagaaaa tggtgatgca aaatgacaaa
    18601 agtgatgatc gtttatgcca gcatgactgg taatacacaa gaaattgccg acattttagg
    18661 tgaagaatta gaaaaatacg atatcgaagt agaaattgaa gaatgtattt cagttgatcc
    18721 tgaagattta ctagaatatg atggcgctct aatcggtggc tatacatacg atgatggtca
    18781 gcttcctgat gagttcgttg atttttatga agatatggcg gacgttgatt ttagcggcaa
    18841 agtttgtgct tctttcggtt ccggcgatac tttttatgat gaatactgtt taacagttga
    18901 tttaattgaa actcgtctaa aagagcaagg tgcgaccgtt cctgttgctg ggcttaaagt
    18961 agaccttgat ccagatgaag aagatgttgt tcgcgcggaa agttacgcaa aaacatttgt
    19021 ggatgtatta aaaggataat tcgaaagcaa gtcctctttt tcggacttgc ttttttattt
    19081 atttaaaaat agcgaaaaca gtagcgtagt ggttgcttta cctcattaat tgagatacaa
    19141 ttctcgtatt gaataaaaag attggagtga ttaattatga cagtatttag tgaaaagtta
    19201 gaaaagtatg cagaattgat tgtaaaagtt ggggtaaatg tccaacctga acagaaagtg
    19261 gtaattatgg ctccagttga cgcggctcca cttgttcgcc ttatttccaa atatgctttt
    19321 gaagttggtg cagaggatgt cattatggat tggcgcgatg aagaattagg cgcattacgt
    19381 tacaaaaatg ctccactacg cgtttttgaa agtgctccgg ttcaccgtgt tgcagaaaaa
    19441 acagaacttg ccaaagaagg cgcttgtttt atctccatca cttccgaaga tccggattta
    19501 ctaaacggcg tggatagcaa caaaattgcg acattccaga aaacaatggg tggtgcaatg
    19561 agcgagtttc gcgagttaat gcaagcaaat gttgtaagtt ggacagttgt tgcagcagct
    19621 tcacaagggt gggcagcaaa agtattccca gatttaactc cagcagaaca aatggaaaca
    19681 ctttgggaag ctatttttga aacaactcgt atcaatacag aaaacccggt agaaacttgg
    19741 aaaaatcacg atcaaacact tgctgcaaaa gcagaaagtt taaatgaaaa acaatttact
    19801 tctttacatt atacggctcc tggaacagac cttacaattg gtcttccaaa aaaccatctt
    19861 tgggttggcg ctggcagtaa gaataaaaaa ggacatgaat ttatggccaa tatgccaaca
    19921 gaagaagtat tctgttgtgc ggataaacta aaagtggaag gttatgtttc tagtacgaaa
    19981 ccacttagtt atgcaggaaa tattatcgat gacttcaaaa tcactttcga aaaaggtcgt
    20041 attgtaggtg tagaagcagc atccggcgaa gaaattttga aagatttaat cgcgactgat
    20101 gaaggctccc actatttagg tgaagtggct ctagttccag acccttcccc tatttcccaa
    20161 tccggcattt tattctacaa tacactattt gatgagaatg cttctaacca cttagcaatt
    20221 ggtagtgcgt atgcatttaa tgttaaaggt ggcgaagaaa tgtctcgtga agagttagaa
    20281 gcagctggtg tgaacaatag tttaacacac gttgatttca tgattggttc ttctgaaatg
    20341 gacattgatg gtgtaaccga atctggtgaa gttgttcctg ttttccgtaa aggcgactgg
    20401 gcgttctaat ccttttttaa aacttatgcc ttttgcgtaa aacccttgta gcttttggct
    20461 ttcaagggtt ttcgtttgtt tattttttac aaaagagagc gaggtgcatt ggatgaaatt
    20521 tagtacatgg gacatcaatt taaaagtaag gctttttggg gaagcactac tcgatatttc
    20581 tttttggatg gtcttcccct ttctaacgat ttacttttcg gaaagtattg ggcgcgagct
    20641 gacgagcctt ttgctgatta tttcgcaagt tttggcggtt ttcacagctt tgcttggcgg
    20701 ttattttgcg gataactttg gtcgtaaacg gatgatgagt atttctgtca ttggagaagg
    20761 ttttggtttt cttgtttttg caataggtgc acttcatgtt gtggattctc cttacttgag
    20821 ttttgctggt ttcgcgattg cgagtgtttt tatggcgttt tatcagccag caagtcaagc
    20881 gatgattgcc gatgtggttc ctcctgagca tcggacgcat atttattcgg tgttctatat
    20941 gatgattaat attgcggtcg ttattggccc cattcttggt tcggttttat tttataattt
    21001 cacgacagaa acactacttg caattgtttg tgcggattta ttattactat ttttattgca
    21061 aaaatttggt cacgaaacag cccctctttt agttaatcct gatttacaaa aagaagcggt
    21121 tcgaaaaagt attggtgctg ttttaatgga acagctaaaa aactataaga ttatttttaa
    21181 agacaagatt ttctttcttt atattgttgc cgggattatt gtttctcagt cgtttatgca
    21241 actggattta cttttcccac tatatattaa agaagttatc ggcgcctcta acttgttcgt
    21301 gtttcatttt acaggtgagc aattgttcgg ggttattgtt tctattaatg gcttctttgt
    21361 tgcagcgctt actgtcgttg tcactcgctg gatgagccat tttagagaaa aatttgtctt
    21421 tatgaattct tcttttctct atgcgattgc gattttctta tttggtattt cgacaggacc
    21481 gtggggagcg atttgtgcca ttattctctt tagcttcgcg gaactgatga ctgttggctt
    21541 gcaacaaacc tttgtttcac agttagctcc agaggataaa cgggcgatgt acttctctgc
    21601 tgctggactt cgttatacgc tgggtaaagt cattgctcca cttgcgatta cactttcgac
    21661 tttaattggc tatactgg
//
LOCUS       DASDYO010000037        21628 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.037, whole genome shotgun sequence.
ACCESSION   DASDYO010000037 DASDYO010000000
VERSION     DASDYO010000037.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 21628)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21628)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21628
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.037"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            21..692
                     /locus_tag="U0290_001197"
     CDS             21..692
                     /locus_tag="U0290_001197"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2301242.1"
                     /translation="MDALFNYKEFVRLSHEGNIKYEKLKVPKHTDLVNTASQRNNHVY
                     LIVEGFVSISMNPQSSSIYTVLGKGSFVNYYSLFQGNVDDFLFTTISPCTIYKYSFKD
                     LEYFLSMFPENFGFQFFIMRDLARHAFFKSLFAETSSSDKLELSFSNMGKLHGTLYEK
                     DSVILPKEMRTSTIAAYSNLSKSSFYKQLTLLKDQGKIWKNGREWVVRNKELYDYVKA
                     RQFVD"
     gene            complement(836..1387)
                     /gene="nrdG"
                     /locus_tag="U0290_001198"
     CDS             complement(836..1387)
                     /gene="nrdG"
                     /locus_tag="U0290_001198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463811.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase
                     activating protein"
                     /protein_id="HEM2301243.1"
                     /translation="MNNPKPCEWKSNELSRGYIADYKAFNFVDGEGVRCSLYVSGCPF
                     HCEGCYNKAAQSFKYGKPYTKELEDDILKDIGHESVQGLTLLGGEPFLNTATCLSVVK
                     RIRATYGETKDIWSWTGYTWDEMMQETADKLELLSLIDVLVDGRFEQKLFDPNLAFRG
                     SSNQRIIDVQKSLAAGEVVLYEL"
     gene            complement(1380..3530)
                     /gene="nrdD"
                     /locus_tag="U0290_001199"
     CDS             complement(1380..3530)
                     /gene="nrdD"
                     /locus_tag="U0290_001199"
                     /EC_number="1.17.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463810.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="anaerobic ribonucleoside-triphosphate reductase"
                     /protein_id="HEM2301244.1"
                     /translation="MYVEQLNEQMVIKRDGRKANFDLIKIRNAVEASMKAINLEDETF
                     LEEILLEVVSELPNKADMTIDEIQHCVENTLMKSTYPDVARAYIEYRHDRDHERENIT
                     DMHKSVEKLLQKDKTVVNENANKDATVFNTQRDLTAGAVAKSYALKYMLPKHVSNAHL
                     KGEIHFHDLDYSPYHAMTNCCLIDIEGMLSKGFTIGNANVESPKSIQTATAQIAQIIA
                     NVASSQYGGCSVDRIDEVLSVYARLNFEKHKKDAMEWVVPEKQEGYAAEKTRKDIYDA
                     MQSLEYEINTLYTSNGQTPFVTLGFGLGEDWFAREIQKAILKVRIGGVGKDKHTAIFP
                     KLVFSIRRGTNLNAEDPNYDIKQLALECSSKRMYPDVLNYDSLVRLTGDFKVPMGCRS
                     FLPAWENENGEHVNAGRNNLGVVTLNIPRIAIQSGGDKERFWEIFHERMKTVKDALLF
                     RLNRVRQARPENAPILYKYGAFGKRLQDGENVDQLFNKERSTISIGYIGLYEAATVFY
                     GGEWEGDKEAKNFTLDILKELKGYADNWKDEYGYWFSVYSTPSESLTDRFNRLDKEKY
                     GVIKDITDKDYYQNSFHYDVRKKITPFEKIDFEKDYPEFCSGGFIHYCEYPKMVHNTK
                     ALEAVWDYSYDRVAYLGTNTPIDKCYECNFEGEFVPTEEGFKCPSCGNTDPEKADVVK
                     RTCGYLGNPMKRPMVHGRHVEISNRVKHMENLGE"
     gene            3821..4921
                     /gene="ugpC"
                     /locus_tag="U0290_001200"
     CDS             3821..4921
                     /gene="ugpC"
                     /locus_tag="U0290_001200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463809.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sn-glycerol-3-phosphate ABC transporter
                     ATP-binding protein UgpC"
                     /protein_id="HEM2301245.1"
                     /translation="MAQLSLEHIYKIYDNKVTAVSDFNLEIDDKEFIVFVGPSGCGKS
                     TTLRMIAGLEEISKGELSIDGKVMNNVAPKDRDIAMVFQNYALYPHMTVYDNMAFGLK
                     LRKMPKDEIKKRVEHAANILGLTEYLKRKPSALSGGQRQRVALGRAIVRDAKVFLMDE
                     PLSNLDAKLRVQMRAEITKLHQQLDTTMIYVTHDQTEAMTMATRIVIMKDGVIQQVGS
                     PKQVYDHPVNMFVAGFIGSPAMNFFKGRLEGSNFIGDDFTIEVPEGKLKLLKDRGFDG
                     KDIVFGIRPEDIHDEPIVIEANPGYTFKATTIVAELTGAEFMLHSRVGTHEFVARVDA
                     RSEHQPNEVLTLAFEMSKSHFFDPETEDNLTD"
     gene            complement(4959..5930)
                     /locus_tag="U0290_001201"
     CDS             complement(4959..5930)
                     /locus_tag="U0290_001201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463808.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2301246.1"
                     /translation="MGNLNWAILGPGSIAHEFAEGMRGMNREIYAVGARSLEKGQAFA
                     SQYGIENVYDDFDKMLADPAIDVVYIATPHSNHYEFIMKSLHNGKHVLAEKAITVSSE
                     ELNEINVLAKEKGLIVKEAMTIFHMPLYKKLREIVESGAIGKLKIIQVAFGSAKEKDP
                     KNRFYNMDLAGGALLDIGTYALSFARYFLSETPDEVLTTMKKFETGVDEQSGILLKNK
                     EEELAVVSLSFRAKMPKRGVIACEEGFITVDEYPRASRATVTHTATGKVEEIEVGETS
                     KALEYEIIAMEESIATGENTTYQLTNDVITIMSDVRTQWGIKFPFEK"
     gene            6046..6867
                     /locus_tag="U0290_001202"
     CDS             6046..6867
                     /locus_tag="U0290_001202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463807.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2301247.1"
                     /translation="MTKKYLICSDIDGTLLRQDQTVSIKTRDLIQTLEKDGHIFSIST
                     GRMYRSAREVGFQVSNSGHVIASNGSYAAIRDEQLLKTTLEEKAIRSTYDIMSDFDLP
                     LFFFSTNTLFYTKEPPAFFQNLADKSRLDTGHNSFSLVSINEKGVFDENMHQFLNAIV
                     VAEDDASKLTEVRAALNEANGIRVLSSHHNNLEILPANSDKKTAVEALGKHYNIPRER
                     IITFGDGENDIGMLQYAGTGVAMANASDNVKAAADHLTDTNEADGVYKFLKEFIS"
     gene            6884..7726
                     /locus_tag="U0290_001203"
     CDS             6884..7726
                     /locus_tag="U0290_001203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463806.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2301248.1"
                     /translation="MKKGILNVLLVFALIAGLSVPSSMQVEAAAPTIKVHFIDVGQGD
                     AIYIKAPSGEDILIDAGNKGKGKTVVNYLKKLKVKDIEIMIASHSDADNIGGLPEVMN
                     NIKVKSLYAPKSTNTTAAYKNFVNTAKKKKLTIKTAKAGVKLPVKGVNAQFVGPVKTY
                     GKTDRNNWSAVLHVAYKKNTFLFTGDAQTKAENDMIKAKKTLRADVLKVSTQGSKAAT
                     SKAFVNVVKPKYAIISVGKNGYGHPTSQTVNTLTKAKAKVYRTDRNKTVVVTGNGSSY
                     SIGK"
     gene            7984..8646
                     /locus_tag="U0290_001204"
     CDS             7984..8646
                     /locus_tag="U0290_001204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2301249.1"
                     /translation="MAYPFNHKEFVAMMEQYNLKSNSITIPEHTILNDLVTENRDCVY
                     LLKSGILAGYIDFDNDKIYSIFTSNFFMGYYTIFDNASLVLTYQTLTECELIIYKKKD
                     IEYSLSLFPENFSFQYTIMRTIAKHGYYKSLLQYRDKKDQLAFVFEMLVKILDIPVED
                     GVAVLPKSISTTVIKNYCTLSKAFFYSQLKELKEAGIISKVKLQWRINMEALSEKNNS
                     IN"
     gene            complement(8683..9186)
                     /locus_tag="U0290_001205"
     CDS             complement(8683..9186)
                     /locus_tag="U0290_001205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301250.1"
                     /translation="MKRNYHVKFLNEKDVELAEAVCAASEDYYLMEQDKPASKSDALK
                     IITEIPNGKTRFDKFVLAVLDENEKPIGLVDIVSDYPRKGRWFIGLLLLTPDARHNGL
                     GKVLHQTIKEWANDGGADSLALGVLAENEKGRGFFEYLGYTKEETKQANYGGKEQEVS
                     IFTLAIK"
     gene            9322..10134
                     /gene="yidA"
                     /locus_tag="U0290_001206"
     CDS             9322..10134
                     /gene="yidA"
                     /locus_tag="U0290_001206"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HEM2301251.1"
                     /translation="MYKLIAIDIDGTLLTDDHKVTDEVKEAIRQAKLKGVKVVLCTGR
                     PLVGVENYLTDLELREEGDYVISFNGAFVQDTFTKEVISHLTLGIDDLKEIYQVSLDS
                     NLHMHFFDDKALYTPNREIGKYTIVEAYLTGSQLIYKEIENVPEDFIMSKAMFIEEAP
                     ELEVGIAKIPESFREKYHLVRSTPFYLEILNRDASKGNAVKELSEKLGIKQSEVICIG
                     DQENDVTMLEFAGLGIAMGNAPERIKQLADYTTASNNDSGVAKAIQKFVLDK"
     gene            10254..11690
                     /locus_tag="U0290_001207"
     CDS             10254..11690
                     /locus_tag="U0290_001207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463802.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2301252.1"
                     /translation="MEHQKRSPFPKDFLWGSASAAYQIEGAWDADGKGKSVWDEYVRI
                     PGTTFKGTNGDVAVDHYHRYKEDVKLMADAGLKAYRFSIAWTRIFPNGKGEVNEAGLK
                     FYDNLIDELLKYDIEPLVTLYHWDIPQALFDEYGGWESRQVIEDFTNYSTTLFKRYGD
                     RVKYWVSLNEQNIFVGMGYGQALHPPKVSDPKRMYAVNHIANLANASVIKAFHEIVPD
                     GKIGPSFAYTPHYPIDTDPKNVQAADDAEELNSYFWMDMYAFGRYPKAVWKYLEENDI
                     APVIEDGDMELLASAKPDFMGVNYYQSATVAYNPLDGVGQNNEMNFTGKKGSTKETGV
                     PGVYKKVVNPFVKTTNWDWTIDPKGLQIALRRINSRYALPILITENGLGEFDKLVDGE
                     VNDDYRIDYLSAHATAIRDAISDGVDMLGYCTWSFTDLLSWLNGYQKRYGFVYVDRDV
                     EDDAPMTRIPKKSYYWYKQVIETNGADL"
     gene            11694..12317
                     /locus_tag="U0290_001208"
     CDS             11694..12317
                     /locus_tag="U0290_001208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEM2301253.1"
                     /translation="MADLQDWLARIQAKITALKEKDPDLNLFGSESHAYKLNQPLSNQ
                     TLTEFENEHQITLPQDYRAFLEQIGNGGMGPYYGLETLADGLCASLDYKDEKYGVQTL
                     SEPFPHTDDWTAPGYKEGMSDEDYDAWQELCFQDKEVFGLLRIANFGCGVSINLVVNG
                     PSYGEIWVDDRNNDNGVYPDFYFGNEERLGFLEWYELWLDKSIEEIE"
     gene            12451..13536
                     /locus_tag="U0290_001209"
     CDS             12451..13536
                     /locus_tag="U0290_001209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2301254.1"
                     /translation="MKKFILASLACTTLISFSPLVGQVEVSAATTNIATAPEKNLQEA
                     PPATVDQIFPDDALAFKVAQELGVSEDTVVTQEQLDTIETMVYVDFGVEDLTGMEYLH
                     NLKFVDLSQNKISNLENLANLTELETVSLNYNQITDITPLMNSPKLYNLELGVNQIST
                     LPSFENLTNLRILNLSSNQLKDISALKDTPQLTNLSISANNISDISVLSECDNLRVFY
                     AESNQLTSIEPLRNKTKLEYFDANFNQIKDVTPLSTIPTIRSIKIEENQISDFSSLAG
                     HRLELFDATGQNIYLPDVALGDSTNIVMKDNLGVTLHDWVWYTPGTYQNDTLTWENAG
                     DNSAYFLNNQYPTYPSVTVTVYQTVTP"
     gene            complement(13565..15451)
                     /locus_tag="U0290_001210"
     CDS             complement(13565..15451)
                     /locus_tag="U0290_001210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463800.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM2301255.1"
                     /translation="MKRIVKIFLHYLLGILGIILISCVPAIFSKVTSWSSSTYWEALK
                     SIFTAIFHPTKWEISYQGSAEVFHVSLADFITGPYFYSMKIIVASLLISAIIAYLLVI
                     ATFRGPKWLRRGLSGFLSILQAFPDFSFIFLIQMAVVYIYQQTGVFTLNFYSLNGEQI
                     YAAPIVCLSIIPTVLFYKMMMLLMENEWQADYIQLARGKGLTDRAILLRHATPNMMQS
                     LFYQSKTIVWFILSAYLVVEFLFGIEGVLYYLLAGFSPLNIFLVLALVFTPFYFFYAL
                     IDLWISRGKNTESANVTRIPLHWNSFQKTFTEKVNLKSKWRNFVVTTGQLLKRPSFSI
                     PLATLSILLIASLIYGLMGDKINSLKFISDATGRVTDMAPFKPNAQVWLGTDQAGNSI
                     LDQLLVGIKYTLLIAVIIATLRVVIGYILAVPLAFFSKPRTRNFVQSIADGMHYLPLS
                     LLVFIIMVNEFISYSGVFETSLFTRITFQILIMVVIVLPITTNRISSEISQVLKKEFV
                     LSALVFGGNARWILTKHINPQIWSKLILIWIEQLIQTLQMFVHLAIFGIFIGGAIMGA
                     DDGMLNPVIPELSGLIANAKFVFANHQFWIILPPLVVFMVLILCFQIMANSLLKREEE
                     SKKA"
     gene            complement(15535..16170)
                     /locus_tag="U0290_001211"
     CDS             complement(15535..16170)
                     /locus_tag="U0290_001211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463799.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2301256.1"
                     /translation="MAEGLRTIYFVRHGKTEWNMTGQMQGWGDSPLVAEGIDGAKAVG
                     EVLKDTPIDAVYTSTSKRTQDTAAYILGDREIEIQPLEELKEMGFGTWEGIRVTEIDE
                     QHPEERAKILHSPETYKAEVNGGETYYELAERLLEGVEKIIAENLSGNILVVSHGMSL
                     TLLLYLLQGGTVEDHRKEAPRILNTSISIVEYQNGEFSLKKINEIGHLDLK"
     gene            complement(16242..17201)
                     /locus_tag="U0290_001212"
     CDS             complement(16242..17201)
                     /locus_tag="U0290_001212"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEM2301257.1"
                     /translation="MKLTGIHHVSIFTANARANFDFYTKIMGLRLVKKSVNQDDPYTY
                     HLYYGDEIGSPGTALTFFEVPNMAKNHPSRNAISSLSLRVPSDEALHYWDKRLDEHRI
                     FHSKPIDQFGRKIIRLKDTDGLPVNLISDETSTQVTEVSPWEDSPVPAEYAIRGLGPV
                     RFSVFKKEKTDRLLTKILGFERIGAYEDDDKLVTVFKTGDVGLGGEVHVESRPDLEQG
                     NLGAGGIHHVAFRVPTDGDLIGWTEMIQDLGYKNSGYVDRFYFHSLYFRESNGILIEL
                     ATDEPGFQTDFTKEHGTYVDLPPHLENRREDILAHLKPLDTDK"
     gene            complement(17208..17624)
                     /locus_tag="U0290_001213"
     CDS             complement(17208..17624)
                     /locus_tag="U0290_001213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2301258.1"
                     /translation="MVKKEERLGVLLWFRFSRFYNRNMKLTNQNLRAVGISTAQFDCI
                     AQIGLDKEITQQQLAEKLVVTKGNVTQLLAKLEQLGYITRTKTGREKHITLTEKGQAC
                     YRENVPKQEAFQQAQFDKLTRDEQKELLKLLKKLGE"
     gene            complement(17771..18910)
                     /locus_tag="U0290_001214"
     CDS             complement(17771..18910)
                     /locus_tag="U0290_001214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463796.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ArgE/DapE family deacylase"
                     /protein_id="HEM2301259.1"
                     /translation="MERQRKIQILKDIVNIDSTNGHEEQVANYLQKLLAEHGIESEKV
                     QYDVDRASLVSEIGSSDEKVLAFSGHMDVVDAGDVSKWKFPPFEAAEHEGKIYGRGAT
                     DMKSGLAAMIIAMIELHEEKQKLNGKIRLLATVGEEVGELGAEQLTQKGYADDLDGLI
                     IGEPSGHRIVYAHKGSINYTVKSTGKNAHSSMPEFGVNAIDNLLLFYNEVEKFVKSID
                     ATNEILGDFIHNVTVIDGGNQVNSIPEKAQLKGNIRSIPEMDNETVKQVLVKIINKLN
                     KQENMNLELIFDYDKQPVFSDKNSDLVHIAKSVASDIVKEEIPLLGISGTTDAAEFTK
                     AKKEFPVIIFGPGNETPHQVNENVSIENYLEMVDVYKRIATEFLS"
     gene            complement(19044..20543)
                     /locus_tag="U0290_001215"
     CDS             complement(19044..20543)
                     /locus_tag="U0290_001215"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463795.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2301260.1"
                     /translation="MKRNKVILRIVVTLAAVLAITFWVGMSSKEVEAAVIEQPTPINE
                     IFTDPVVADNVKTLLEKADVTDEVTQTDLDSITQLSAKSAGITTIEGMQYLTNLSELE
                     LTDNQITDVSPLANLTKITELGLSGNPLKDVSALAGLKSLTTMHLIYTDITDVTPLEG
                     LTNLQELNLDINQITDISPLAALTNLQTLSLGYTQVSDLTPIANLSKLTILNAENSKV
                     SDISPLASLSSLTEVYLRENQISDVSPLANIPNLSIIELTDQIITNQPVYYQNKIIVP
                     NVIKGLSGELIAPDTISDNGAYTSPDLTWDLNSYINSVSYTFNQSIAFKNTTVPFSGT
                     VTQPLTEAYTAVFDVDGEQTSLTVVVNELIEEPTVPTKEGYTFDGWYDAETNGNKWDF
                     AVDKMPASDITLYAKFTENEEPNASSSINVEPNDDNSINVEPDASNSITVKPTENNDG
                     TNNPNSSGDDKINIKLPITGDEWNVLPIFVGAVLIGMGLVLFRKKRQTK"
     gene            complement(20751..>21628)
                     /locus_tag="U0290_001216"
     CDS             complement(20751..>21628)
                     /locus_tag="U0290_001216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="InlB B-repeat-containing protein"
                     /protein_id="HEM2301261.1"
                     /translation="FFGITLDDQKITSEPVLYQQELVVPNNIKDEMGALISPDTISDN
                     GVYASPNISWNLANYTNQVSYTFNKQLAQGSFSGTVIQPLHNAYTATFDVDGVKTNEV
                     VEETKLLQEPTAPTKEGYTFTGWYDAKTGGNKWDFATDKMPAEDITLYAQFTINSYTA
                     TFDIDGKLTTQKVTYQSLLEEPAAPTKDGYTFKGWYDAKTGGTKWDFATGKMPAGNIT
                     LYAQFTKNATPDSNDPTTVTPTGNGNGTSNPSNSGGNTTLPTAGDENTMLPIFVGVFL
                     LGTAMLILRKTIKVK"
BASE COUNT         6408 a         4209 c         4034 g         6977 t
ORIGIN      
        1 aagtaaaggg gctgctaata atggatgcat tatttaatta taaagagttt gttcggcttt
       61 ctcatgaagg caatattaaa tatgaaaaat taaaagttcc aaaacataca gatttagtaa
      121 atactgcctc gcaaagaaat aaccatgtct atttaattgt agaaggcttc gtgtctattt
      181 ctatgaatcc gcaatctagt agtatttata cagtcttagg taaaggctct tttgtaaatt
      241 actatagttt gttccaagga aatgtagatg actttctgtt tacaaccatt tccccgtgca
      301 ctatttacaa atattctttt aaagatttag agtactttct ttcgatgttt ccagagaatt
      361 ttggttttca atttttcatt atgcgagact tggcgcgaca tgcattcttc aaaagccttt
      421 tcgccgagac tagttcttct gataaattag agctttcttt ttctaatatg ggcaaattac
      481 acggaacgct ttatgaaaaa gatagtgtta ttttaccgaa agaaatgcga actagtacta
      541 tcgctgctta tagcaatcta tcgaaaagca gtttttacaa acaattaacc cttttaaaag
      601 accaaggtaa gatttggaaa aatggaagag aatgggttgt tagaaataag gaattgtacg
      661 attatgtgaa agctagacaa tttgttgatt aaaaaacgcc acctgagtta tgggtggcgt
      721 tttttatttg gattagtact atcatcattc ttacattgtt gattctatgc ccgcacatat
      781 attcaataag catccaaagc aaaaagaata agccctccat caaagagggc atatttcaca
      841 actcatacaa aaccacttca ccagcagcaa gtgatttctg cacatcaata attctttggt
      901 tgctggaacc gcggaatgct aggttggggt cgaatagttt ttgttcgaag cggccgtcta
      961 ccagaacatc tattaaggat agaagttcta gtttgtcggc ggtttcttgc atcatttcgt
     1021 cccaggtgta gccggtccat gaccagatat cttttgtttc gccgtatgtt gcgcggattc
     1081 gtttcacgac agataggcat gtggcggtgt ttagaaatgg ttctccgcca agtaaagtga
     1141 ggccttggac gctttcatgt ccgatgtctt ttaggatatc gtcttctaat tctttcgtgt
     1201 aaggtttgcc gtatttaaat gattgcgcag ccttgttgta acagccttcg cagtggaaag
     1261 gacatccaga tacatataga ctgcaccgga cgccctctcc gtcgacaaag ttgaatgcct
     1321 tatagtcggc gatataccct ctggataatt cattcgactt ccattcacac ggttttggat
     1381 tattcaccta agttctccat atgtttcacg cgattgctaa tttctacgtg acgtccatga
     1441 accattggac gtttcattgg gttgcctaaa tagccacaag tacgttttac aacatctgct
     1501 ttttcggggt cggtgttgcc acagcttggg catttgaagc cttcttctgt aggaacaaat
     1561 tcaccttcaa aattacattc gtaacattta tcgattggtg tatttgtacc aaggtaagct
     1621 acacgatcat aggagtaatc ccatacagcc tcaagtgctt tcgtattgtg aaccattttt
     1681 ggatattcac aataatgaat gaatccgcca gagcaaaatt ctggataatc tttttcaaaa
     1741 tcaatttttt caaatggggt aattttttta cgaacatcat agtggaaaga gttttggtag
     1801 tagtctttat ctgtgatgtc tttaattaca ccatattttt ctttgtctaa acggttaaaa
     1861 cggtcagtta agctttcact tggagtcgaa tatacgctaa accagtagcc atattcatct
     1921 ttccagttgt ccgcataacc ttttagttct ttcaagatat caagcgtgaa gttttttgct
     1981 tctttgtcgc cttcccattc cccgccgtaa aatacagtcg ctgcttcata aagaccgata
     2041 tagccgatag agatagtaga acgttcttta ttgaaaagtt gatcaacatt ttcgccatct
     2101 tgtagtcgtt tgccaaatgc tccgtattta tataaaattg gtgcattttc tggacgtgct
     2161 tgacgtacgc ggtttaaacg gaaaagtagc gcatctttga cagttttcat gcgttcgtgg
     2221 aaaatttccc agaaacgttc tttgtcccca ccactttgga tagcgatacg tggaatgtta
     2281 agtgttacaa caccaagatt gtttcttccc gcgttcacgt gttcgccgtt ttcgttttcc
     2341 caagctggca agaacgaacg acagcccatt ggtactttga aatcgcctgt taagcgaacg
     2401 agtgaatcgt agttgagtac atctggatac atccgtttcg aggaacactc tagcgccaat
     2461 tgtttaatgt cataattagg atcttctgca tttaaattag ttccacggcg aatcgaaaat
     2521 actaatttcg ggaaaatagc cgtgtgttta tctttaccaa ccccaccaat acgcactttt
     2581 aggatggctt tttgaatttc acgggcaaac caatcttcac caagaccgaa gcctagtgtt
     2641 acgaacggtg tttggccgtt acttgtatat aatgtgttga tttcgtattc taagctttgc
     2701 atcgcatcgt aaatatcttt gcgtgttttc tccgctgcat agccttcttg tttttctgga
     2761 acgacccatt ccatcgcatc ttttttatgt ttttcaaagt tcaaacgcgc gtaaacggat
     2821 aaaacttcat caatacggtc aaccgaacaa ccgccgtact gtgaacttgc tacgtttgcg
     2881 attatttgag caatttgtgc ggtagcagtt tggatagatt tcgggctttc tacgttggca
     2941 ttaccaatcg taaatccttt tgacagcatt ccttcgatgt cgattaaaca acagttggtc
     3001 atcgcatggt atgggctgta atctaaatcg tgaaaatgaa tttccccttt taaatgagcg
     3061 ttggatacgt gttttggtag catgtatttt aatgcgtaac tttttgctac ggctcctgct
     3121 gtcaaatcgc gttgcgtatt aaagacagtc gcgtctttgt tggcattttc gtttactact
     3181 gttttgtctt tttgtagtag cttttctacg cttttgtgca tatctgtgat gttttcacgc
     3241 tcatggtcgc gatcatggcg gtactctatg taagccctcg ctacatcagg atacgtcgat
     3301 ttcattaaag tattttcgac gcaatgctgg atttcatcga tggtcatatc tgccttgtta
     3361 ggtaattcac ttacaacctc aagcaaaatc tcttctaaga aagtctcgtc ctctaaatta
     3421 attgctttca tagatgcttc aacggcatta cgaattttaa ttaaatcaaa gtttgcttta
     3481 cggccgtccc tttttattac catttgttca ttaagttgtt ccacgtacat gataatcccc
     3541 cactaactat atattgtgtc tgctttaata atataacaca agatgaagtt ttattgtaat
     3601 gatatctgag gaatttccgg aattgggact aaagaattaa gcgctgtgaa aaatctttca
     3661 cataaaaggt cttttgtccc tttacttctt tttatttttt tgctacttat gcaagttgcc
     3721 caacagatga attttttctt tgtgcaaatt gccatagttt ttgtaaagcg ttttcatata
     3781 caatgaacac aagttaaaaa atagaaagag gcgaagaaag ttggcacaat tatcactaga
     3841 acatatttat aaaatttatg ataacaaagt aactgcggta tctgacttta atttagaaat
     3901 cgatgacaaa gaattcatcg tttttgtagg tccatctggt tgtggtaaat ctacaacttt
     3961 acgtatgatt gctggactag aagaaatttc aaaaggcgaa ctatctattg atggtaaagt
     4021 aatgaacaat gttgcgccaa aagaccgtga catcgcaatg gtattccaaa actacgcatt
     4081 atatccgcat atgactgtat atgataatat ggcattcggt ttaaaacttc gtaaaatgcc
     4141 aaaagacgaa attaaaaaac gtgttgagca tgcagcaaat attcttggct taactgaata
     4201 cttaaaacgt aaaccaagtg cactttccgg tggtcaacgt caacgtgttg ctctaggtcg
     4261 tgcaatcgtt cgtgacgcaa aagtcttcct aatggatgaa ccactttcca acttggatgc
     4321 gaaattacgt gtgcaaatgc gtgcggaaat cacaaaactt caccaacaat tagatactac
     4381 aatgatttac gttacccatg accaaacaga agcgatgaca atggcaactc gtatcgttat
     4441 catgaaagac ggtgttatcc aacaagttgg ttcaccaaaa caagtttacg atcacccagt
     4501 aaatatgttc gtagccggct ttattggaag cccagcaatg aacttcttca aagggcgttt
     4561 agaaggttct aactttatcg gtgatgattt cactattgaa gttccagaag gcaaattaaa
     4621 acttcttaaa gatagagggt ttgacggtaa agatatcgtt ttcggtattc gtccagaaga
     4681 tattcatgat gagccaatcg ttattgaagc taatcctggt tatacgttca aagcaactac
     4741 tattgttgcc gagcttactg gtgctgaatt tatgcttcat agccgcgttg gtacacatga
     4801 attcgtagca cgtgttgatg ctcgctcgga acaccaacca aacgaagtac tgactttagc
     4861 attcgaaatg tctaaatctc acttcttcga cccagaaaca gaagataact taactgatta
     4921 atattcttag aaaaacccgc caagctcggc gggttttctt atttttcaaa aggaaattta
     4981 attccccact gcgttctaac atcgctcata atcgtgataa catcatttgt taactgataa
     5041 gtcgtgtttt ctcctgtcgc gatgctctct tccatagcta taatttcata ttctaaagct
     5101 ttacttgttt caccaacctc aatttcttcc acttttccag ttgccgtgtg tgtaacagtt
     5161 gctcggctgg cacgcgggta ttcatctaca gtgataaatc cttcttcaca agcaatgaca
     5221 cctcgttttg gcattttagc acggaaagat agcgatacaa ccgctagttc ctcttcttta
     5281 tttttcagta aaattccgga ctgttcgtcc acacctgttt cgaatttctt catcgtcgtt
     5341 aatacttcat ccggcgtttc acttaaaaaa taccgagcaa aactaagggc atacgtacca
     5401 atatcaagta atgctccacc cgccaaatcc atattataaa aacggttttt cggatctttt
     5461 tctttggcac ttccaaaagc aacttgaata attttcaatt taccaattgc tccagattcc
     5521 acaatttctc gtaacttttt ataaagcggc atatggaata tggtcattgc ttctttaacg
     5581 attaagcctt tctctttggc tagcacattg atttcattaa gttcttcgct acttacagtt
     5641 atcgcttttt cagctaaaac gtgtttgccg ttatgtaaac ttttcatgat aaattcatag
     5701 tggttagagt gtggtgtagc gatataaact acatctatcg ccggatcagc aagcattttg
     5761 tcaaagtcat cgtatacatt ttctattccg tattgacttg cgaatgcttg ccccttctct
     5821 aaactccgtg ctcctaccgc ataaatttca cggttcattc ctcgcatacc ttctgcaaat
     5881 tcgtgtgcaa ttgaacctgg tccaagaatt gcccagttta aatttcccat catggaactc
     5941 ctccaaaaaa ttattttaga actcgataaa aactattgta tcataataac tattccgatt
     6001 cgcacatggt atacttaagt tattaactaa aaaggatgat tttatttgac taaaaagtat
     6061 ttgatttgtt ccgatatcga tggcacatta ctgcgccaag atcaaactgt ctctataaaa
     6121 acgcgtgatt taatccaaac cttagaaaaa gatggccata ttttttctat ttctacagga
     6181 cggatgtatc gctctgcccg tgaagttggc ttccaagtga gtaattccgg tcatgttatt
     6241 gcctcaaacg gatcctacgc ggctattcgc gatgaacaac tgcttaaaac cactttagaa
     6301 gagaaggcaa ttcgctccac ttacgatatt atgagcgact tcgatctacc actttttttc
     6361 ttctctacca atacactttt ctatacaaaa gaaccacctg ctttcttcca aaatcttgct
     6421 gataaaagtc gcttagatac aggacacaat agtttttcgc ttgtttctat taatgaaaaa
     6481 ggtgtttttg atgaaaacat gcatcaattt ttaaatgcta ttgtcgttgc ggaagatgat
     6541 gcctcaaaac taaccgaagt tcgcgctgct ctaaatgaag cgaatggtat tagagtcctt
     6601 tcttcacacc ataataattt agaaatactt cctgctaatt ctgacaaaaa aacagccgtt
     6661 gaagcgcttg gaaagcatta caatattcca cgcgaaagaa ttattacttt tggtgatggc
     6721 gaaaatgata ttggcatgct acaatatgct ggaaccggtg ttgcgatggc aaatgcaagc
     6781 gataatgtca aagcagcagc agatcatctt actgacacga atgaagcaga tggggtttac
     6841 aaatttctaa aagaattcat ttcataagag aagaggaaaa gggatgaaaa aagggatttt
     6901 aaacgtatta ttagtttttg ctttaattgc ggggctttcc gtaccaagtt ctatgcaagt
     6961 tgaagctgct gcaccaacta taaaagtgca ttttattgat gttggtcaag gagatgccat
     7021 ttatatcaaa gcacctagtg gagaagatat tttaattgat gcaggtaaca aaggtaaagg
     7081 gaaaacggtt gtaaattatt taaaaaaatt aaaagtaaaa gatattgaga taatgattgc
     7141 ttctcattca gatgcggata acattggtgg attaccagaa gtcatgaata atatcaaggt
     7201 aaaaagcctt tatgcaccaa aatccacaaa cacaacagcc gcttacaaaa attttgtgaa
     7261 cacggcgaaa aagaaaaaac taaccattaa aaccgcaaaa gcaggcgtaa aactccctgt
     7321 caaaggagta aatgcgcagt ttgttggtcc tgttaaaact tacggaaaaa cagatcgaaa
     7381 caactggagt gctgttctcc acgtcgcata taagaaaaac accttccttt tcacaggaga
     7441 tgcgcaaaca aaagcagaaa acgatatgat taaggcaaag aaaaccttac gagctgacgt
     7501 gttaaaagta agtacacaag gttccaaagc tgcaacaagc aaagcgtttg tcaatgtcgt
     7561 taaaccaaaa tacgccatta ttagcgttgg gaaaaatgga tatggccacc ccacttcaca
     7621 aaccgttaac acattgacaa aagcaaaagc gaaagtttat cgaacagatc gtaataaaac
     7681 cgtcgttgta acaggcaacg gctccagtta ttctatcgga aaataattta tgcttatacg
     7741 aaaagccaat aataaagata cgactttatt attggctttt tccaactatg cgtattggtt
     7801 aacctttctg agttagaaat aactcaaata tgacaaaaat attgcggtta cattggctaa
     7861 aaaagggtat tttcataaaa aagaggtttt ttagaagtct atttttagta cttgtgcaaa
     7921 cttttacgat gatacaatgt atttgtatta gtacaactga atctgaagga gacgaagtaa
     7981 aaaatggcct atccatttaa tcacaaagag tttgttgcaa tgatggaaca atacaattta
     8041 aaatctaaca gcatcacaat acctgaacat accattctaa atgatctagt tactgaaaat
     8101 cgggattgtg tgtatttact taaatctggt atattggccg gatatattga tttcgacaat
     8161 gataaaattt attctatttt cacatctaat tttttcatgg gatattatac gattttcgat
     8221 aatgcatccc ttgttttaac gtatcaaaca ctaactgagt gcgaattgat tatctacaag
     8281 aagaaagata tcgaatactc gctctctctc ttccctgaaa actttagctt ccaatacaca
     8341 attatgagaa ctatcgccaa acatggttac tacaaatcac ttttacaata tcgcgataaa
     8401 aaagatcaat tggcttttgt atttgaaatg cttgtcaaaa tcctcgatat tccagtggaa
     8461 gacggcgtcg cagtactacc aaaatctatt agtacgacag tcattaaaaa ctactgtacc
     8521 ctgtcgaaag ccttcttcta ttctcaactt aaagaattaa aagaagccgg gattatttca
     8581 aaagtaaaac tgcaatggcg tattaacatg gaagctcttt cagaaaaaaa caatagcata
     8641 aactaagaaa aaggatgcag ttttatgagc tgcatccttt ttttatttaa tcgctaaagt
     8701 gaaaatacta acttcttgtt cttttccgcc ataattagct tgtttggttt cttctttcgt
     8761 gtagccaagg tattcaaaga atccacgccc tttttcattc tcagctaaaa ctcctaaggc
     8821 taatgaatct gccccgccgt cattcgccca ctctttgatc gtttgatgaa gtacttttcc
     8881 aaggccgtta tgacgagcat ctggcgttaa aagaagtaat ccgataaacc agcgcccttt
     8941 tcgcggatag tcagaaacaa tatctactaa gccgattggt ttttcatttt catccaatac
     9001 agctagtaca aacttatcga atcttgtttt cccgtttgga atttctgtga taatttttaa
     9061 tgcatcactt ttcgatgcag gcttatcttg ttccattaaa taataatctt cggatgccgc
     9121 gcaaacagct tctgcaagtt ctacatcttt ttcatttaaa aatttcacat gataattacg
     9181 tttcattatt tcactctttt ctttatcaag tttccaagtc aatcatgcca taaattccct
     9241 gttgtttcaa tagatagcca gaaatccatc tgaatttatg ctatactaga atgagtttat
     9301 gatggaaaag gagctagtat attgtataaa ttaatcgcga ttgatattga tggaacacta
     9361 ctgacagatg atcataaggt tacggacgaa gtaaaagaag ccattcgcca agcaaaacta
     9421 aaaggcgtaa aagtggttct ttgtactgga cgtccgcttg ttggtgtaga aaattatctg
     9481 actgaccttg aattacgtga ggaaggcgat tacgttatta gttttaacgg cgcatttgtt
     9541 caagatacgt ttacaaaaga agttatttct cacttaacgc ttggcattga cgatttaaaa
     9601 gaaatttatc aagtgagttt agatagcaat ttgcacatgc atttctttga tgacaaagcg
     9661 ctttatacgc cgaaccgtga aatcggcaaa tacacgattg tcgaagctta tcttactggt
     9721 agccaactga tttataaaga aatcgaaaac gtgccagaag attttattat gtcaaaagca
     9781 atgtttattg aagaagcccc tgagctagaa gttggtattg cgaaaatccc agaatcattc
     9841 cgcgaaaaat atcatctagt tcgtagcacg cctttctact tggaaattct aaatcgtgac
     9901 gctagtaaag gtaacgcggt caaagaactt tccgaaaaac ttggcattaa gcaaagcgaa
     9961 gttatctgca ttggcgacca agaaaatgat gttacaatgc ttgaatttgc tggtcttggt
    10021 attgcgatgg gcaatgctcc agaaagaatt aagcaattag ctgactatac gactgcatcg
    10081 aacaatgata gtggtgtagc aaaagcaatt caaaaatttg tgctggataa ataaaacaaa
    10141 aacgcagatt cgaataggaa tctgcgtttt ttaactatct ttttaaaaga atatacttta
    10201 aaatatatta gtagagtttt ttaataaaaa tcgctttaat ggaggttata ttaatggaac
    10261 atcaaaaacg ttcaccattc ccgaaagatt tcttatgggg ttctgcatcg gcagcttatc
    10321 aaatcgaagg cgcatgggac gcagacggta aaggtaaatc agtttgggac gaatatgtcc
    10381 gcattcctgg aactactttc aaaggtacaa atggcgatgt agctgtcgac cattatcacc
    10441 gttataaaga agacgtaaaa ctaatggcag acgctggcct aaaagcttac cgtttctcta
    10501 tcgcttggac tcgtattttt ccaaatggta aaggcgaagt gaatgaagct ggcttgaaat
    10561 tttatgataa cttaattgat gagttgctta aatatgacat tgaaccactt gtaacgcttt
    10621 atcactggga tatcccacaa gcattatttg atgaatacgg tggctgggaa tctcgccaag
    10681 ttattgaaga tttcacaaat tattccacaa cgctattcaa acgttacggc gaccgcgtga
    10741 aatattgggt ttccttgaat gagcaaaata tctttgttgg tatgggttat ggtcaagcgc
    10801 ttcacccacc aaaagttagc gatccaaaaa gaatgtacgc agtaaaccac attgcgaact
    10861 tagctaatgc gagtgttatc aaagctttcc acgaaatcgt tcctgatgga aaaattggac
    10921 caagttttgc ttacacacca cattatccaa tcgacacaga tcctaaaaac gttcaagctg
    10981 ccgacgatgc agaagaatta aacagttatt tctggatgga tatgtatgct tttgggcgct
    11041 atccgaaagc ggtttggaaa tatttagaag aaaacgatat tgcgccagtt atcgaagacg
    11101 gcgatatgga acttcttgct tctgcaaaac cagatttcat gggcgtaaac tattaccaat
    11161 ccgcaactgt tgcttacaac ccgcttgatg gcgttggtca aaacaacgaa atgaacttca
    11221 ctggtaaaaa aggtagcacg aaagaaactg gtgtccctgg cgtttacaaa aaagtcgtta
    11281 atccttttgt gaaaacaacg aactgggact ggacaatcga tccaaaaggc ttacaaattg
    11341 cgcttcgtcg tattaacagc cgctatgctt taccaatttt aattacagaa aacggtttag
    11401 gtgaatttga taaattagtg gacggagaag taaacgatga ctaccgtatt gactatctaa
    11461 gcgcgcacgc aactgctatt cgcgatgcaa tcagtgatgg tgttgatatg ttaggctatt
    11521 gtacttggag cttcacagac cttctaagct ggttaaacgg ctatcaaaaa cgttacggtt
    11581 ttgtttatgt tgaccgcgat gtggaagatg atgcgccaat gacacgtatt ccgaagaaaa
    11641 gttattactg gtataaacaa gtgattgaaa ctaatggagc agatttataa atgatggctg
    11701 accttcaaga ttggctagct agaatccaag caaaaatcac tgcgttaaaa gaaaaagatc
    11761 ccgatttgaa tttatttggt tcagaaagcc acgcctataa acttaatcaa ccattgtcta
    11821 atcaaacgct taccgagttt gagaatgagc atcaaattac cttacctcaa gattatcgcg
    11881 cttttctaga gcaaattggt aatggtggaa tgggtcctta ttatggctta gaaacacttg
    11941 cggacgggct ttgcgcctcg cttgattaca aggatgaaaa gtacggggtg caaacattaa
    12001 gtgagccttt tccacataca gatgattgga ccgctcctgg ttataaagaa ggaatgtccg
    12061 atgaagatta tgatgcttgg caagaactgt gcttccaaga taaagaagta tttggacttc
    12121 tgcgtatcgc taattttggt tgtggcgttt cgattaacct tgttgtaaac ggtccttctt
    12181 atggagaaat ttgggtggat gacagaaata atgataatgg cgtctatcct gatttttact
    12241 ttgggaatga agaacgttta ggctttcttg aatggtatga gttatggtta gataaatcta
    12301 tagaggaaat tgaataaaga aaaaaccgct aaaaagaagc atactctttt tagcggtttt
    12361 tttatgcaat gttcatatgt gatggctttt tatttttaaa taatttgcat gctatactcc
    12421 atttatatta tagaaaagga gtaggatgac atgaaaaaat ttattctagc aagccttgca
    12481 tgtacgactt tgattagttt tagtcctttg gtaggacaag tcgaagtaag cgctgctaca
    12541 acaaacattg ccactgcccc agaaaaaaat ttacaagaag ctcctccagc cacggttgat
    12601 caaattttcc cagatgatgc tctagctttt aaagtcgcac aggaactagg tgtttccgag
    12661 gatacagtcg ttacacaaga acaactagat actatcgaaa caatggtata tgtggatttc
    12721 ggtgtggaag atttaacagg catggaatat ttacacaact taaaatttgt agatttaagc
    12781 caaaataaaa ttagcaactt agagaatctc gctaatttaa cagaattaga aacggtatca
    12841 cttaactaca atcaaattac agatattact ccactaatga actcacctaa attatataac
    12901 ttagaattag gcgttaacca aatctctact ttaccatcct tcgaaaattt aactaattta
    12961 aggatattaa atctaagtag caatcaacta aaagatattt cggccctaaa agatactcct
    13021 caattaacta atttatctat ttcagcaaat aatatatcag acatcagtgt cctttcagaa
    13081 tgcgataatc tccgagtttt ttatgccgaa agcaatcaac tgacttctat tgagccatta
    13141 agaaataaaa caaaactaga atacttcgat gctaatttta atcaaattaa agatgttaca
    13201 cctctcagta ccattccaac aattaggtca ataaaaattg aagaaaatca gattagtgat
    13261 ttcagctcat tggcaggtca ccgcttagaa ttgtttgatg ctactggaca aaatatatac
    13321 cttccagatg ttgcgctcgg cgattccact aatattgtaa tgaaagataa tctcggagta
    13381 acattacatg attgggtttg gtacacccca ggaacttacc aaaatgatac acttacttgg
    13441 gaaaatgcag gcgataattc cgcttacttt ttaaataatc aatatccaac ttacccttct
    13501 gtcacagtga ctgtctatca aacagtcact ccttaaataa taatagccta gttcttttat
    13561 agaactaggc ttttttactt tcttcttctc gtttcaaaag cgaatttgcc ataatttgga
    13621 aacaaagaat taaaaccata aataccacta atggaggtaa aattatccag aattggtggt
    13681 tggcgaacac gaatttagcg tttgctatta aaccagataa ttcagggata actgggttta
    13741 gcatgccgtc atcggcgccc atgattgccc ctccgatgaa aattccaaag atagctaaat
    13801 ggacgaacat ctgtagcgtt tgaatgagct gctcaatcca aatcaaaatt aatttggacc
    13861 agatttgtgg attgatatgc ttggttaata tccagcgagc atttccgcca aaaacgagcg
    13921 cactcaagac gaactctttt tttaacacct gggaaatttc actgctgatt cggttggttg
    13981 taattggtaa aacgatgaca accatgatta aaatttggaa ggttatgcgt gtaaataggc
    14041 ttgtttcgaa aacgccagaa tagctgatga attcgttgac catgataata aagacgagta
    14101 atgacagtgg tagataatgc attccgtccg ctatcgattg aacaaaattg cgggttcgtg
    14161 gcttgctgaa aaatgcgagc ggtactgcca aaatgtaacc aatcacgaca cgtagcgttg
    14221 cgatgatgac agctataagt agcgtatact tgatgccgac gagtaattgg tcgagaatgg
    14281 agttgccggc ttggtcggtg cctagccata cttgcgcatt tggtttgaag ggcgccatat
    14341 cggtcactcg tccggtcgca tcactgataa atttaagcga gttgattttg tctcccataa
    14401 gcccgtaaat aaggctcgcg attagtaaga tgctaagtgt tgccagcgga atgctgaagg
    14461 atgggcgttt taggagctgc ccggtcgtta ctacaaagtt gcgccatttg cttttaaggt
    14521 ttactttttc cgtaaaggtt ttctggaaac tattccagtg cagcggtatt cgggtcacgt
    14581 ttgcgctctc ggtatttttc ccacggctaa tccataggtc tattagtgcg taaaagaagt
    14641 aaaatggggt gaacacgagt gctaatacta ggaaaatatt taatgggcta aatcctgcta
    14701 gtaaatagta gagcacgcct tcgataccga ataaaaattc tacaacgagg taggcgctta
    14761 aaataaacca aacgatggtt ttggattggt aaaataggct ttgcatcata ttgggtgtgg
    14821 catggcgaag tagtatcgct ctatcggtta agcctttccc gcgagccagt tggatgtagt
    14881 cagcttgcca ttcattttcc ataaggagca tcatcatttt gtaaaagagc acggttggta
    14941 tgatggataa gcagacgatt ggtgctgcat aaatttgctc gccgtttaag ctgtaaaaat
    15001 tcaaggtgaa cacgcctgtt tgctgatata tgtagacgac ggccatttga ataaggaaaa
    15061 taaaggaaaa atctggaaaa gcttgaagta tcgataggaa tccgcttaag cctcggcgca
    15121 accattttgg cccgcgaaat gttgcaatca ctagtaaata agcaataatc gctgaaatta
    15181 gcaagctcgc tacgataatt ttcatggagt agaaatatgg tccggtaata aaatctgcca
    15241 acgagacatg aaaaacttct gcgcttcctt ggtaactaat ttcccatttg gttgggtgga
    15301 aaatcgctgt gaaaattgac ttaagagcct cccagtacgt gcttgatgac catgaagtca
    15361 ctttgctaaa tatcgcggga acacaactga ttaaaataat tcctaaaatt cctaataaat
    15421 aatgtagaaa aattttgaca attcttttca tatgtatgtt ttctcccttt ttctagcttt
    15481 ctcttatgta taaatctagg acacacctcc aatgagatat gtccaagatt ctacttattt
    15541 taagtctaaa tgaccgattt cattgatttt tttaagagaa aattcgccgt tttggtattc
    15601 tacgatgcta atacttgtgt tcaagattct tggcgcttct ttgcggtgat cttcaaccgt
    15661 tccgccttgc agcaagtata ataataacgt gagcgacatg ccgtgagaaa cgacgagaat
    15721 gttgccgctt agattttctg caatgatttt ttcgacgcct tctaacagtc gttctgcaag
    15781 ttcataataa gtctcgccgc cgttcacttc tgctttgtag gtttctgggc tatggagaat
    15841 ttttgcgcgt tcttcagggt gttgttcgtc aatttcagtt actctaatgc cttcccacgt
    15901 tccaaatccc atttctttta gttcttccag aggttgaatt tcgatttcgc ggtcgccaag
    15961 aatgtaagcc gcggtatctt gcgtgcgttt acttgtactt gtataaaccg catcaattgg
    16021 tgtatctttc aacacttcgc caactgcttt tgccccgtca ataccttctg caactagcgg
    16081 cgaatcgccc catccctgca tttgtccagt catattccat tccgtcttac catgtcttac
    16141 aaaataaatt gtacgtaaac cttctgccaa aattctgcct cctaattaca cattcttcta
    16201 aaattgtatc atgaataggc atattttcaa ggttttctta tttatttatc tgtatcaagt
    16261 ggttttaaat gagccaaaat atcttcgcgg cgattttcta aatgtggtgg taaatcaacg
    16321 taagttccat gttctttcgt gaaatcggtt tggaaacctg gttcatcggt tgcaagttcg
    16381 attaaaatgc cattgctttc gcggaaataa agagagtgga aataaaaacg gtccacatat
    16441 cctgaatttt tgtagccaag gtcttgaatc atttctgtcc agccaatcaa gtcgccatct
    16501 gtcggtacac gaaacgccac gtgatgaatc ccgccagcac ctaaatttcc ttgttctaaa
    16561 tcaggtcgcg actccacatg cacttctccg ccaagcccaa cgtcgccagt tttgaatact
    16621 gtaactaatt tatcgtcatc ttcataggca ccgatccgct cgaagcctaa tatttttgtc
    16681 aaaagacgat ctgttttttc ttttttgaaa acagagaagc gcactgggcc aagtccgcga
    16741 atggcatatt ctgctggaac cgggctatct tcccaagggc tcacctcggt tacttgtgtg
    16801 cttgtttcat cggaaatcaa attgaccggt aagccatctg tgtcttttaa acgaataatt
    16861 ttgcgcccga attggtcgat tggtttactg tgaaaaatgc gatgctcatc gagtctttta
    16921 tcccagtagt gcaaggcttc atcgcttgga acacgtaagc tgaggctaga aatcgcattg
    16981 cgtgatgggt ggtttttggc catatttgga acttcaaaga aagttagcgc tgtccccggc
    17041 gaaccgattt cgtctccgta atataagtgg tacgtataag ggtcatcttg gttaaccgat
    17101 tttttcacta gtcgtagtcc cattattttt gtataaaagt caaagttagc tcgtgcgttc
    17161 gctgtaaaaa tagatacgtg atgaattccc gttaatttca taaataatca ctctcctaat
    17221 ttttttaata gcttaagtag ttctttttgt tcgtctcttg ttaatttatc aaattgagct
    17281 tgctgaaaag cttcttgttt tggcacgttt tcgcggtaac acgcttggcc tttttctgtg
    17341 agggtaatat gtttttcgcg ccctgtcttt gttcgcgtga tataacctaa ttgttctaat
    17401 ttcgcgagga gttgggtaac atttcccttc gttacaacta atttttcggc aagttgttgc
    17461 tgtgtaatct ctttgtctaa gccaatttgg gcaatgcaat caaactgcgc tgtcgaaatt
    17521 cctaccgctc gcaaattctg attggtcagc ttcatattcc gattgtaaaa tcgactaaat
    17581 cgaaaccaaa gcaaaacccc tagcctttct tcttttttta ccatgctcgt cccctcctct
    17641 tgatattatt agtttagtac taaactgtat taaaagcaag aaaaaagcct agcacctgtt
    17701 tacaaacaaa tactagactt ttatttaatt gcgtatttta tagcggaaaa taagtaaagt
    17761 taaagttcca tcacgataaa aactcggtgg caattcgttt gtaaacatct accatctcca
    17821 aataattctc tatagaaaca ttttcgttta cttggtgagg ggtttcgttt cctggtccaa
    17881 aaataatcac tgggaactct ttcttagctt tggtaaattc tgctgcatcg gttgttccgg
    17941 aaataccgag taatgggatt tcttctttga caatgtcgct tgctacgctc ttagcaatgt
    18001 ggactaaatc cgaattttta tcactaaata ctggttgttt gtcataatca aatattaatt
    18061 ctagattcat attttcctgt ttgtttaact tattgataat cttcactagc acttgtttca
    18121 ctgtttcatt atccatttct ggaatcgagc gaatattccc ttttagttgc gctttttcag
    18181 ggatactatt gacttgattt ccaccatcaa ttacggtgac attatgaata aaatcgccta
    18241 atatttcgtt agtagcatca attgatttca cgaatttttc tacttcatta taaaatagca
    18301 acaagttgtc aatcgcatta acaccgaatt ccggcatcga actatgcgca tttttaccag
    18361 tggatttaac ggtataatta atggaacctt tatgcgcata aacaatccgg tgtccactcg
    18421 gttcgccgat aatcaagcca tctaaatcat ctgcgtaacc tttttgcgtt agttgttcgg
    18481 ctccaagttc accgacttct tcaccaaccg ttgctaataa tctaattttg ccatttagtt
    18541 tttgtttttc ttcatgaagc tcaatcattg caataatcat cgccgctaga cctgacttca
    18601 tatccgtcgc gccacgtccg tatattttcc cttcatgctc tgctgcttca aaaggtggga
    18661 acttccactt cgagacatca cccgcatcaa cgacatccat atgccctgaa aacgccaaaa
    18721 ctttctcgtc actggaacca atttcgctaa ctaggctggc tctgtctacg tcgtattgta
    18781 ccttttcgga ttcaataccg tgttcagcta acaacttttg caaatagttc gcaacttgtt
    18841 cttcatgccc attagtcgaa tcaatattca caatgtcttt taagatttga atttttcttt
    18901 gtcgttccat gtttacgccc tctttctttg aattccactc tatgttttcc cgttccataa
    18961 aaagacaaac tcatcctcct aatctctaat caaaaaatgg cttagctact gtatgattta
    19021 cagaagccaa gccagtaatc aaattatttt gtttgacgtt ttttgcggaa taaaactaag
    19081 cccattccga taagaactgc tcctacaaaa atgggaagca cattccattc gtccccagta
    19141 attggtaact tgatgttaat tttatcatca cctgaactgt tcggattatt tgttccatcg
    19201 ttattttctg ttggttttac agtgatggaa ttgctagcgt cgggttctac attgatggaa
    19261 ttatcatcgt ttggttccac attaattgaa ctactagcat ttggttcttc gttctcagtg
    19321 aacttagcat ataaagttat atcactagca ggcattttat ctaccgcaaa gtcccattta
    19381 ttcccattcg tttctgcgtc ataccagcca tcgaatgtat atccttcctt ggttggaact
    19441 gttggttctt caattaattc attcacaact actgtcaaac ttgtttgctc tccgtccaca
    19501 tcaaaaacgg cagtgtaagc ctctgttaat ggttgggtga ctgttccact gaaaggaacc
    19561 gttgtatttt tgaaagcaat tgattgatta aatgtgtaac taacactatt aatgtagctg
    19621 tttaaatccc acgttaaatc aggactagta tatgctccat tgtcgctaat agtatcaggt
    19681 gcaataagct caccggaaag gccttttatc acatttggaa caatgatttt attttgataa
    19741 tatacgggtt gattggtaat tatttgatcc gtcaactcaa taatagataa gttgggaata
    19801 ttcgcaaggg gactcacatc gctaatttga ttctctctca agtaaacttc tgtaagacta
    19861 gataaactag caagtggcga gatatcgctt actttactat tttcagcgtt taatatggtt
    19921 agtttagata aattagcaat tggggttaaa tcactaactt gggtatatcc gagtgataat
    19981 gtttgcaagt tagttaaagc tgctagtgga cttatatccg ttatttgatt gatatccaaa
    20041 tttaattcct gcaaattggt aagaccttca aggggagtca catcggtaat atctgtataa
    20101 ataagatgca tcgttgttag actttttaat cccgcaagcg cactcacatc ttttaatgga
    20161 tttccggata atccaagctc tgttattttc gttaaatttg cgagcggact tacatcggtt
    20221 atttggttat ctgttagttc tagttctgat aaattagtta agtactgcat tccttctatc
    20281 gttgttattc ccgcagattt agctgataat tgggttatac tatctaaatc agtttgcgta
    20341 acttcatctg ttacatccgc tttttcgaga agtgttttca cattatcagc aaccactgga
    20401 tcagtaaaaa tttcattaat aggggttggt tgttcaatta ccgctgcttc tacttctttt
    20461 gagctcatcc caacccaaaa agtaattgcc aatactgcag ctaaagtcac tacgattctt
    20521 aatattactt tgtttctttt cattaaacta tctcctttgt atgatcgttc tgcttttaga
    20581 aatttgtgtg ttctcgtagt tgagttacta tattatagcg tagtaggttt tcgttcaatc
    20641 actaaaatta gacttgttat cgttttaatt gtgacgttta gatgaatttc tttgctaata
    20701 aaaaaacagc cgaaatctat agaaaaacta tagatctcag ctgttttttg ttattttact
    20761 ttgattgttt tgcggagaat aagcattgct gttcctaaca agaaaactcc tacaaaaatg
    20821 ggaagcatgg tattttcgtc cccagctgtc ggaagtgtcg tatttccacc tgaattgctt
    20881 gggttacttg taccattgcc atttcctgtt ggagtaaccg ttgttgggtc attggaatct
    20941 ggggtggcat ttttagtaaa ctgggcgtat agcgttatat ttcccgccgg catttttcct
    21001 gtcgcaaaat cccatttagt tccacctgtt ttagcatcat accaaccttt gaacgtatag
    21061 ccatccttcg ttggcgctgc tggttcttct agcaagcttt gataagtgac tttttgcgtc
    21121 gttaacttcc catcgatgtc gaatgtggct gtatagctat taatcgtgaa ctgcgcgtat
    21181 aaagtgatgt cctctgctgg cattttgtct gtcgcaaaat cccatttatt cccgccagtt
    21241 ttcgcatcat accagcctgt gaaagtgtat ccttctttgg ttggggctgt tggttcttga
    21301 agcaatttcg tttcttccac tacttcattt gttttcactc catctacgtc aaatgtcgct
    21361 gtataagcat tgtgaagtgg ttgaatcact gttccgctaa aagaaccctg tgctaattgt
    21421 ttattaaatg tgtaacttac ttggttagta taattagcca agttccaact aatattcggg
    21481 cttgcataaa caccattatc gctaattgta tctggtgaga ttaacgctcc catttcatcc
    21541 ttaatgttat tagggaccac aagctcttgt tgatacaata ctggttcact cgttattttt
    21601 tgatcatcta aagtaatacc aaaaaaat
//
LOCUS       DASDYO010000038        21532 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.038, whole genome shotgun sequence.
ACCESSION   DASDYO010000038 DASDYO010000000
VERSION     DASDYO010000038.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 21532)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 21532)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..21532
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.038"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            120..326
                     /locus_tag="U0290_001217"
     CDS             120..326
                     /locus_tag="U0290_001217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301262.1"
                     /translation="MRPYSFNDFRYICYVEGKDKAIEKLFASLRTDKEIAILNKRIQK
                     DTINIENVYKEYLRGINGAEQNNI"
     gene            650..2173
                     /locus_tag="U0290_001218"
     CDS             650..2173
                     /locus_tag="U0290_001218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LXG domain-containing protein"
                     /protein_id="HEM2301263.1"
                     /translation="MSRIDIGEIQAFLYQLRAANEPGRKTIQSIKAAVTKYVGDNSLK
                     GKAVDASKNYYQMTYFPLCDAIIEAMDESEERLGQYIQDFHAEVDSSPDAKIDADGLY
                     ELGKMIDRIESKKEALAQRMNSGTEGQMQNYRSQLAIAYKQENILEKYLSFEQSHASF
                     FDHLIDLVQAVQQTIRELQSNIQFNSQTGTYDLSKLNHATVSHMQQALNKARGIKEDI
                     IKELQDYTVLAVVYLDSNGKEQVMWLLERDGLGVENAELKAYLEKNGKYLNPEDYSII
                     TNEDLNKKINKAWRDGVYYLNGNKYDGLTGGILSTSAYVEAGKGFIDKSGLADVVLGL
                     GLSTAAIRGSVTFGKKNKLKGYDYLDDLLGDLNNKVKIKKYDSAESVNKYWHQQNYDQ
                     PPYTPKTPVQDLELLVETKFVRVYDGGSSKLHGGWLMKAEDIKGLTPTQIKDKFALPN
                     IPKFVGEVTLPKGSNIRMGEVNPLFENKGGGIQFDLKGQFIGEFKELGKISEWGGLK"
     gene            2155..2532
                     /locus_tag="U0290_001219"
     CDS             2155..2532
                     /locus_tag="U0290_001219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301264.1"
                     /translation="MGRIKVTINAEYIDNKLTAFGKSIEFKNKIVELKENDNCLFVRL
                     LVVPGQELNENTLSNVYAINKLGEIQWQIKNVAPKGNNVYICAPLVGMDIEENDLFVT
                     DFMGRRFEVNQENGELNQVRIVK"
     gene            3005..3349
                     /locus_tag="U0290_001220"
     CDS             3005..3349
                     /locus_tag="U0290_001220"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301265.1"
                     /translation="MTKITHMNNKLIFENQEYTFEYPIQTLREDKNHVYVLLDIPANQ
                     EYTFDDFHNIYAFSYTGERKWQIGERPVGDNDVYTLINVKEGILYATDFSGRKYKVCE
                     KNGIPEKMEIVK"
     gene            3475..3816
                     /locus_tag="U0290_001221"
     CDS             3475..3816
                     /locus_tag="U0290_001221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301266.1"
                     /translation="MKKLQWLTNRLFATSILLITTLFIIPPTFAIADGSKVSFYEYIY
                     GAPFRWLTVISTTDKKGAFTEMFFSGNEGITIQWPNLMINFLLIFLAITIIFSLAKKL
                     YDKKNVKKDNP"
     gene            complement(3883..4251)
                     /locus_tag="U0290_001222"
     CDS             complement(3883..4251)
                     /locus_tag="U0290_001222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2301267.1"
                     /translation="MAFSIGEFSELVGIPSSTLRFYEKEGLITPDRDKNNLRIYSEED
                     ANWLKFLLHLKGAGLSVEELKQYTIWRAAGDSTISERLNMLKKKKVILEQEIEDLQKN
                     LDTVVRKIGIYEEKVKTRRV"
     gene            complement(4307..5290)
                     /locus_tag="U0290_001223"
     CDS             complement(4307..5290)
                     /locus_tag="U0290_001223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2301268.1"
                     /translation="MKKRQLGNTGLVTSELGFGCMGLNYHWGPAKDRKEMIEVVRTAM
                     DTGITMFDTAEVYGPYTNEELVGEALVGKRNHVQIATKGGFKINGLNNEVDSRPESIK
                     AAVEGSLKRLKTDYIDLYYIHRIDPSIPIEEVAGTIQNLKQEGKILHWGLFEASAKTI
                     RRAHKVEPLAAVENEYSIWWREAEKEIFPVLEELGIGLVAYSPLGRGYLTGKLDINAN
                     FNENDNRGGLPRFQKEAMEANQVLLDFMKEIADEQNVTTAQLAIAWILDQKPWIVPIP
                     GTTKQSRIKENIASTDIRFDDGARQKIADALSQIEIVGDRYSAAENKRIGK"
     gene            5681..6370
                     /locus_tag="U0290_001224"
     CDS             5681..6370
                     /locus_tag="U0290_001224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2301269.1"
                     /translation="MKYIDYHDYMHKDAIIYAYLQNNFPYIRKRIKAWESFTLDREDI
                     LLVKSGAIFEEISGKKKGIARCFFSKSLIFPTRNQIVLKAFETSEICFINAETAFGKL
                     EKDQILSNFFLQIAEKNEEDMRRQAFLGTENSKNKIISTLNFLLENNKSNNKTPIFPE
                     WLQINVLAQLANCSISTISSTVNELHAEGILDIKSSPWKLKGREKRIEILENEHQKIK
                     LNERKHKSNVF"
     gene            6447..12326
                     /locus_tag="U0290_001225"
     CDS             6447..12326
                     /locus_tag="U0290_001225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEM2301270.1"
                     /translation="MKKNILVVMIVSVLAISAIVSAFFLMRDDAYAIETEGFTYSPKG
                     KVVDFSSEAKYNDTWINNEKTITDKKEMKPINLARTLFLKDGRIQFLGKSVAVKSASD
                     LIELPSKTSITESKGSYKAKSDSNKTLAQLPKGTVVKLAEGRYIILDNAYLKNKQGLN
                     KKLPKNVLVSIDENKKVTLMGDKTIEELGGDDAYIEMENNHYHFDLKKEMLVSQTAKE
                     TDIDIRSIKVEIDDNAEKRSLKTAKETANETTKDSTQKEPEKQSNDTSGQKTTQNNET
                     SEGKDNQTQGASGNNANGNANNNTARSNGTGGSDSGANGSQPGGTQNKPNEGDVNKAN
                     EIIKKLNEAENTNTFQVPIVDVNLTVKGQVATAKLKLTDSSKRLNSLEAILYDSKNNI
                     VKKEKLNSTKANQNFTFNNLKYGETYQVVVQGSYKSASNKNQDTIFFRQTVEAKPVVL
                     TPKVTERGEDYMKAELTATELYGQIDKLVLKIKENNSNVTTSQKVTVDASQLTKDGQV
                     EVKFNSLSSAKEYIIEMEELIVDGKNVTDDSWYFISSTLKAKPTIEGINLSYSTDKGE
                     FVASPVNLIDRDESITSIRYVAYLEDDYKANGSNAKEYAYSVVDANQKKTAVKVGRTV
                     DMNDGSYIFVGYISGNNGQSDYTFATPASNSVIVGKKTKPTVEFSLKEAEQDKLTINY
                     EIFDADNTLLFDNLTHPTLKLYKSDAQGMYSGNPVATVDLTKKSDITNLLEFDGLESE
                     AYYVVVMTGSYNLDDGAGIMVDELIGQSSVFRTTEITKVNASFSLDSVDTTKATINVK
                     LSEAAVNLNDANLKIYEKKTNTLVKTIPLHGDFEKLMSDLGNSYPFKDLSINKEYLVK
                     IEDGYDSGMNHVPVEGQFIFKTKKEAPETDKVLLDYKASEMKLGGLAGIAATEKPLID
                     DYNAVSSITYSIYKADDLNTPLVEQEVSTAADFEKHVYFDLTNKLLGRGYSYVIKADV
                     VWNDNYEDHHIEINSDTIQIKKEKPTVEYEILSRTASEIKLNVYVEDEEESIVPGTLE
                     ITSTTGGNEQLQSGKNNVTLPLSSEGTTTIKTTGDYIITSGSSAISDIFMTKQLAALN
                     TTAPQVGAKIAMDASGKSMTIAPEPNAVAKTSVMRTKYDLKDAASSKPDYSITKSGPN
                     QFNTQNLNLPIGNIWFDNSYQLTLDMKMNYTENKIDNQNLANNYYLSIGNGASFVSSL
                     SGAVSTTNNVNSADVFKVTKASTDSEGNISGVTFKNIWTDKYIAYRNGILISNSETPD
                     SFKLIRQADGSYVPELSGRYVSFSVGLVTDEAAGSKIDLYSTQEKLEQVSEAISVKAL
                     EEPAISAENISVYDKRVKIDVIGEDKDNTTVKKDNKNELFVNVYKADGTTLVKSIRID
                     GLPTRDVSVTELSPDSDYVVKVEGKYDLLDGKGEKDKVYFSETIKTEKSLPSMTSTDY
                     SWNPAYGQRAIKGNIHFTDESSVLTNIEYRLYDAATISSNLSNLVALEQELGNKTPVA
                     TFDNMTNSPEFSIYNSSGAQNFVSGKTYVIAAYMKTSLTRAPIFLSDAKELYISPPSG
                     VSAPITLENVSTREATLKFSYNDPQSYFVGGTNKEFQYVLKNTTNGKEIKKGSFQGGN
                     TASWINTFEELEPATGYTLTISTQYDNLNGGLVRAWNTSFNFTTDDEYVTSNSLTIQL
                     DAGAKVVKLQAKEVKPGSTTIENIKMEFYELIDYGGNNEHNQLVETKNITLPSSYPAT
                     IAADFNVAGKKKNQSFLGKMIVTYRTPTNEVKTYEKTSNFITLQEDIAAGLKAFKSVR
                     ATNKTLEVKLDTPQVNLTDKGDYTYELKGENGEVIDTEKVAAEDISKTVSLSMEPTSD
                     YTLTVINPDNQPVALYQGNNEENNLKAEINKDSFTLMSNNTADAETTMTVTVEPKELT
                     AWQTVQSWFGKDFTETYNIQKDELDTGVKIDANYQDTKVTVEETKSGKNFGIIELEES
                     K"
     gene            12323..14632
                     /locus_tag="U0290_001226"
     CDS             12323..14632
                     /locus_tag="U0290_001226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301271.1"
                     /translation="MKPTWKIGIIVAAVPLIIIAVVLWGSFKEARYNLVSLPDDGVVL
                     NNEQETLQFQKGNTLYRSWNSDQLIAKNDKEDTRNEIMESTILYLNKEALMFTKSVPV
                     IDTNGVSSKLKGRQVYQQTNSSYKYKNSEITENSIVKLANRQYYLNADATLYLGGKEI
                     KKVSKPLLLIDKTGSVTIYENKKKSRFLGHMTLKVNDKTVLDASNETYTVGERKIDLA
                     SFGGTDNEKIVVKEDKKKTAESAKEKESAKKTASNSSQSENESNQTTKGTGNQLNATK
                     KYGNNLNVGNGTSDSEPNDGKDTKNNGSGSNANGGTNQSDLNEIDNYEAILRKIEDLN
                     KKLERNIPVLRIGYIAPGVTSVKVNYNYVDPNNTLIGVTKISAVDEKTGKTVNTQYVS
                     AVDTEATLKGLSPNGKYHLEFTYQYDLGTNKGIQEVKMQSDSFTTQTVAAIYQMQSVT
                     STTMKVNIALDAQIDDVKRARIKVTKADGDFFYMNVSANFLNGNGETLNVTGLSPKTA
                     YQFQTIIEMKNGETIELNSSEKYYTMQATVLRNLRASQSVNKVLQVQYDWSSADYTLN
                     QATIELEDEEDKTEVDYQIVNQEKGNIHLVPDTKRELINLKAKLVLKTTNNNTKESKT
                     FEYPVKQEIEYDKQAKLTMDLTPFQTEENSELQSEKQDLVAEKETNGNDLTAKMEDVL
                     APQNATYDMSFSMQRKALETYQLEFERKIAGIDDDNWTVWKSQQVTTDEAGQVKVTET
                     ISKLAKESFDYRVAVYDAQGALQLYVYQK"
     gene            14689..14931
                     /locus_tag="U0290_001227"
     CDS             14689..14931
                     /locus_tag="U0290_001227"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463621.1"
                     /note="Produces ATP from ADP in the presence of a proton
                     gradient across the membrane. Subunit C is part of the
                     membrane proton channel F0; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP F0F1 synthase subunit C"
                     /protein_id="HEM2301272.1"
                     /translation="MDLVVACSVIGAALAIGLATLGAAIGQGIAVSRATEIIGKNPNA
                     KKEVMGGLFLGLLMIVALMLFALAIAVILLWVNPFI"
     gene            14943..15974
                     /locus_tag="U0290_001228"
     CDS             14943..15974
                     /locus_tag="U0290_001228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEM2301273.1"
                     /translation="MEKMIQTIILYSVFAVGFLYLLHFTLRKLENILTSFFYEVSQDQ
                     SLEKESLLRRLKRQKVATTQEEQKNRQLAIESEQKEELFLEEIDQLIAQNKSYEQQLQ
                     AWENEKPKQIVEVPRFETTPHAPYKSLSSYINEIFQQVFIESEEDEARLFTEAIREFD
                     ALVRTEKIRCALPYKVILQLFEMYSPDQLHLFAQSFQRYSERSSKLPVKQIYQSSYLS
                     PEQKLKVMQEEGTLDELDAEFIQFLFYMMTHYSYRQTRNLYRNFLEVYNIHFYTGLIC
                     IHVASKDSANHFEKLWQPAHRSYKIEYQVQKELIGGVIIQYGSKSIDMSYQELIKRST
                     EKMEAEVKL"
     gene            15971..17467
                     /locus_tag="U0290_001229"
     CDS             15971..17467
                     /locus_tag="U0290_001229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463623.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEM2301274.1"
                     /translation="MKTIHFDMNKYETHVDLEYLKEHGRVEKISDGVIFCSGLENAAL
                     HQAVLIDERHRGVILELNEEFVGIGLIDKTNDILEGMHVGVSGKFIEVDLFEEMAGRV
                     IDTTGKMLYEESEEKPTATSPLFCVTPAIMTIDSVTRPLNTGLAVIDSITPIGRGQRQ
                     LILGNRQSGKTQIAVDTIINQHDQNVHCIYVAIGLKAAYIAEVIETLRNHGAMEYSTV
                     VATAASDSLTAQYLTPYAGMAVAEALRDQGKDVLIILDDLTKHADAYRAITLLFNRPP
                     GREAYPGDSFYIHSSLLERAVQMNEEHGGGSITAIPMIETLSDDVTAYIPTNVISITD
                     GQLFLKSDLFNRGQKPAVDVGVSVSRIGGDAQHPIIRKLSKNLTLILSQFEELKELLD
                     FGNALDDGSMKMVSDGRLLTELFKQKILSPLSVTELIVILYAFQNGFLTKIPPANIQT
                     FKDLLLEKTHMHKDFESFSAQIETINELNESHIEMLEEIIREAGRLFS"
     gene            17464..18333
                     /locus_tag="U0290_001230"
     CDS             17464..18333
                     /locus_tag="U0290_001230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEM2301275.1"
                     /translation="MSSIDQARKTIKALNSTYKIVHVTELATLGKLSALREKAEAAVS
                     YYETILKSLRWVRKTMYTSNNQVKEEKNVTAIAITSERGLCGAYNSEVFVEIDQLIES
                     LGEQVTINWVVVGEQGHRYLTKLGQNITSYLQFSLENIDLETTTAVTADFIDLIHSEQ
                     MDALYVIFTKYLNAVQSEAMCEKIYPEIPEDSNTEEIEVDYVLDFETDDEQVEQLLLE
                     NYLCGLLYSMFRYSVASEYCMRRIAMKQAKDNIQKQLEEAIFNARKQALQQKTGELLD
                     IISGAQTIRKDEE"
     gene            18334..19704
                     /locus_tag="U0290_001231"
     CDS             18334..19704
                     /locus_tag="U0290_001231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463625.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEM2301276.1"
                     /translation="MKKNTGTIISISGFVLKIEFNESELPEIGFALEYHTHQGTYLAE
                     VVQHTGINTVSAIAIGEVSGLARGTEVVNLGHPIEVPVGETVQGRMLNVYGKAIDGKP
                     EPAAEVKWPIFRDQPLLRELDTNKEILYTGIKVIDLICPILKGGKTGLFGGAGVGKSV
                     LMQELINNISMLGGNSVFTGVGERVREGIGLYKELEASGVLPQTTVVLGQMNESPGVR
                     MRVALTGLTIAEYLRDEEKKDVLLFIDNVFRFIQAGSEVSSLQGKIPITGGYQSTLSK
                     EVGDFQDRIASTKNGSITSIQCVFLPADDIDDPSAVATFSHLDSTIVLERSIAALGIF
                     PAVNPLQSFSRALNPTFVGERHYQLAAQVKFILQRYMELQEIINVLGMAELSDEDRKL
                     VHRARKIRNFLSQPFYVSEKFTGTEGTFVEIEDLLGSIERILNGDYDERSERDFLFIG
                     SYKDLK"
     gene            19717..20049
                     /locus_tag="U0290_001232"
     CDS             19717..20049
                     /locus_tag="U0290_001232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEM2301277.1"
                     /translation="MKLKIVSPMGQFFEGEVEGFVINTKEGQQTVLEEHIDCLSFFDY
                     SEISILDAVASDPIFVALGYLHLVQNEANIMAQFASTDAEQAERIFERLNKRKQTESR
                     RSDDKRIF"
     gene            20030..20590
                     /locus_tag="U0290_001233"
     CDS             20030..20590
                     /locus_tag="U0290_001233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301278.1"
                     /translation="MTSEFFSTLLLIIGLLLGFFLAILLILVGIRRFLCSAEEPLKRI
                     QRYQLWHNRYQLNAEVTSFLIVIGASLSVSLITLQITAIPFQYTVLIFWSSWLFHLLS
                     FWKKIRVPKKMKNEMKQLAGFLLITVLYFVGFFAMKSVHFSIIQVADFPGVIQFGIRT
                     YLTICSFFVACGALIVWQRIYVKLLK"
     gene            20765..21397
                     /locus_tag="U0290_001234"
     CDS             20765..21397
                     /locus_tag="U0290_001234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2301279.1"
                     /translation="MTFLEFHQLVKEDLLIYSWIIKNFHLTRQKLMAGGEITMNREQV
                     IVMEKGLLVQVNEEGKDDLYRVFIDQRIIFTTKGDITLTALEDTTYSIIRAEELIGKL
                     EDQHLLPTFFLEIAEDFEKGLDWQRTLISVDPAERAEMILAKIIERYQINSENKPEFP
                     RWLRINVLARFAKCSVSTMSSVVNELVNEGDLNIKGTPWLLTRPYQATCA"
BASE COUNT         7752 a         3433 c         4236 g         6111 t
ORIGIN      
        1 tacaagtatg tagttccagt ccacattgat aacgaaaaac acattgtgca gcttgaaaga
       61 tttgacgaac gaataattga cattaatata gaagatattg ttttctgcga ggttatgaca
      121 tgagaccata tagctttaat gattttagat acatctgcta cgtagaagga aaagataaag
      181 ctatagaaaa actatttgct agtttgcgga cagacaaaga aattgctata ctaaacaaaa
      241 gaatacaaaa ggatacaatt aatatagaaa atgtttataa agaatacttg cggggcataa
      301 atggggcaga gcaaaacaac atataaatac ttatagcttc ttgtaacagc ttttaaaaag
      361 gcataaaccg cgtaacaaag ccgatttctt cccgtgaatg cgtataactg ctcaacacaa
      421 aaccaactct taatcagcgg gtcgggggtt cgaaaccctc acaacccata aaaaacaaac
      481 gccagtgact gttaaagtcg ttggtgtttt gtcgttttta cgggcaaaat gttaataatt
      541 tcaataataa gctgatttct ttttgattat ttatcgatta catagaaaat aagtggaatt
      601 tcaaagtatc taataattta ctacatgata tacaaaagga gttgtttcag tgagtagaat
      661 tgacatcgga gaaatacaag cttttttata ccagctacgt gcagccaatg aaccaggaag
      721 gaaaactatc caatctatca aagcggccgt gacaaagtat gtgggagata atagtttaaa
      781 aggaaaagca gttgatgcat cgaaaaatta ttatcaaatg acttatttcc ctctctgtga
      841 tgcaataatc gaagctatgg acgaaagtga agaaagattg gggcagtaca tccaagattt
      901 tcatgccgaa gttgatagct caccagatgc caaaatcgat gcggacggtt tatatgaact
      961 gggtaaaatg attgaccgaa tagaaagcaa aaaagaagct ttagcacagc gaatgaacag
     1021 tggaacagaa gggcaaatgc agaattatcg ttctcagtta gctattgcgt ataaacagga
     1081 aaacattctc gagaaatatt tgtcatttga acaaagccac gctagctttt ttgaccattt
     1141 gattgactta gttcaagcag ttcagcagac catccgcgaa ctccagtcga atatccagtt
     1201 caacagccag acaggcactt acgatctaag taagctgaat cacgctacag tgagccacat
     1261 gcaacaagct ttaaataaag cacgaggaat aaaagaagat attataaaag aactacaaga
     1321 ctacacagtg cttgcagtgg tatatttaga tagtaatgga aaagaacagg tgatgtggtt
     1381 attagagcga gacggcttag gagtggagaa tgccgaactt aaagcctatt tagaaaaaaa
     1441 cggaaaatat cttaatccag aagattattc gattattact aatgaagact tgaataagaa
     1501 aatcaataaa gcttggcgag atggtgttta ttatctaaat ggtaacaagt atgatggact
     1561 aactggcggt attttatcta cctcggcata tgttgaagct gggaaagggt ttatagataa
     1621 gagtgggtta gcggatgttg tgctggggct tgggttgagt acggctgcga ttagagggag
     1681 tgtgacattt ggtaagaaaa ataaactgaa gggttatgat tatttagatg acctgttggg
     1741 cgatttaaat aataaagtga aaataaagaa gtatgactct gctgaaagtg tcaataaata
     1801 ttggcatcaa caaaactatg atcaacctcc atatacacct aaaacacctg tccaagattt
     1861 agaacttttg gtagaaacta aatttgtcag ggtatatgat gggggaagtt caaaactaca
     1921 tggtggatgg cttatgaaag cagaggatat aaaaggttta acaccgactc aaattaaaga
     1981 taaatttgca ttacctaata tacccaaatt tgttggagaa gttactttgc caaaaggcag
     2041 caatatcaga atgggagaag taaatcctct tttcgaaaat aaaggtgggg gtatacaatt
     2101 tgatttgaaa ggtcaattca ttggtgaatt taaagaactc ggaaaaatct cagaatgggg
     2161 cggattaaag tgacaattaa cgcagaatac attgataata aattaactgc ttttggaaaa
     2221 agcattgaat ttaagaataa aattgtagaa ttaaaagaga atgataactg tttatttgtg
     2281 agattattgg ttgttcctgg tcaagaatta aatgaaaaca ctttaagtaa tgtatatgca
     2341 attaataaat tgggtgaaat tcaatggcaa ataaaaaatg ttgcgccaaa aggaaataat
     2401 gtttatatat gcgcaccatt ggtaggtatg gatatcgaag agaacgattt atttgtaaca
     2461 gatttcatgg ggcggaggtt tgaagttaat caagaaaatg gtgaactcaa ccaagtgaga
     2521 atagtgaaat aaactctcct tttactctaa taaatttttg tttgttgaag tttattagga
     2581 tattggattt actattaaag gtagcgaggt ggactaaaag tctcgtaatt actggattta
     2641 aatgataata cgggtgaaat caaggatatt gaagagttaa taaatgaaaa ctcatgtgat
     2701 taagtaaaca aattacggag gaataactat ttttaagttg gaaataagtt tgcgctttag
     2761 aaagccgaca ttattaagaa atgctgaaac agggcacgca ccatttaaag cgataactta
     2821 atttgaataa tttttaaatg aagatgagtg aaaattggct aaaggtactt tctcatgaga
     2881 gaaatatatc aagtgaactg tccacaagag aatataagac ctttttagag gatatgatgt
     2941 tgaggtagtt aagctgatag atttgctaaa gaaagaatca aacacaaaga tgaggaaaaa
     3001 gcttatgacg aagataactc atatgaataa taaattaatt tttgaaaacc aagaatacac
     3061 atttgagtat ccaatacaaa ctttgagaga agataaaaat catgtatatg ttttattaga
     3121 tataccagcc aaccaagaat atacgtttga tgattttcat aatatttatg ctttttctta
     3181 tacgggtgaa cggaaatggc aaataggaga gagacccgtt ggagataatg atgtttatac
     3241 tttgattaat gtaaaagaag gaatacttta cgctacagat tttagcggaa gaaaatataa
     3301 agtttgtgaa aaaaatggaa ttcctgaaaa aatggaaatt gtaaaataaa aaatacattt
     3361 tactgtctcg ttcagaaccc ttgcaaccca tatttaaaaa gggcctaaat gttttagcaa
     3421 tgtttttata aaatcccaaa ttggaaaacc aaccttcacc caaaaggagc taacatgaaa
     3481 aaactacaat ggctaactaa ccgattattt gcaacctcta tcctcctaat caccacgtta
     3541 tttatcatac ccccaacatt tgcgatagct gatggaagta aagtgagttt ttatgaatac
     3601 atatatggag caccttttag atggctaact gtaattagta cgacagataa gaaaggtgca
     3661 tttacggaga tgtttttctc gggaaacgag ggtataacta tccaatggcc caatctaatg
     3721 ataaactttc tcttaatttt ccttgcaata actattatct tttccctagc aaaaaagctt
     3781 tacgataaaa agaacgtcaa aaaagacaac ccataacagg ttgtcttttt ctatatgctg
     3841 ttgtaaatgg tctcttactg tacacgagaa aaattcacct agctaaactc gtctagtctt
     3901 aaccttctct tcataaatcc caatcttcct aaccactgta tccaaattct tctgcaagtc
     3961 ttcaatctct tgctccaaaa taaccttttt cttttttaac atatttaatc gttcggaaat
     4021 agtgctgtct cctgctgcgc gccaaattgt gtactgcttt aattcttcta ccgataaccc
     4081 ggcgcctttt aagtgcagta aaaattttag ccaattggcg tcttcttcgc tgtatatgcg
     4141 caaattattc ttgtcgcggt caggggttat taagccttct ttttcgtaga atctaagggt
     4201 gctactggga atgcctacta gttcggaaaa ttcaccgata gaaaaagcca tttaatcacc
     4261 tcatctgtgt gtttttcata aggataccat tttgaatagg aaatgcctac tttccgatgc
     4321 gtttattttc agctgctgag tatctatcac caacaatttc aatctgcgat aaagcatcag
     4381 ctattttttg tcgtgctccg tcatcaaaac gaatgtccgt ggaggcgata ttttctttaa
     4441 ttctgctttg ttttgttgtt ccgggaattg gcacgatcca aggtttttgg tcaagtatcc
     4501 aagcgatggc gagttgtgcc gttgtgacat tttgctcgtc ggctatttct ttcataaaat
     4561 cgagtagtac ttggttggct tccatggctt ctttttggaa tcttggtaag ccaccgcggt
     4621 tgtcgttttc attgaagtta gcatttatat ccaatttgcc agttaaataa ccgcgaccta
     4681 gtgggctgta tgcgacaagc ccgatgccaa gttcttctaa aaccggaaat atttcttttt
     4741 cagcttctcg ccaccagatg gaatactcat tttcaacagc agctagtggc tctactttat
     4801 gagcacggcg tattgtcttt gcgctggctt cgaaaagtcc ccagtgtaga atttttcctt
     4861 cttgttttaa attctgaatg gttccggcaa cctcttcaat tgggatagag gggtcaattc
     4921 tatgaatgta atataaatca atgtaatccg tttttagccg tttgagagag ccttcaaccg
     4981 cggccttgat gctttctgga cggctatcga cttcgttatt taaaccatta attttaaaac
     5041 caccttttgt tgcaatttga acatggtttc ttttgccaac taaagcttct ccgacaagtt
     5101 cttcattagt ataaggtccg tacacttcag cagtatcgaa catcgtaatc cctgtatcca
     5161 ttgcagtgcg tacgacttca atcatttctt ttctatcttt cgcaggtccc cagtgataat
     5221 tgagtcccat acagccgaat ccaagctctg aagttactaa accagtgttt cctaattgtc
     5281 tctttttcat aaaaatatgc tccttttaaa ccaaattttt aaattagaaa tatcaggatg
     5341 ttgtatttag tttatcagtt gaagtgaact ttaagtcaag cgtaactaat ttatttttaa
     5401 gagcatgaga tagtttaaca aaagcgatga ttaattttat tttattgatg ggggcttatt
     5461 ctttgttctt ggaaggaaaa attgcataaa agctgtctta aataagcgct aggaacgatt
     5521 ttagtagttt taatagtact aatacatcaa gaaatgttac gaaaaaatgt cgacaaatac
     5581 tcaaaatcac gtaaatcagt tgtaaatgag tatacgaatt aaacgtattt tctaagataa
     5641 taatatttat gatggaaatt cagaaagggt gataacaaga atgaagtata tcgattacca
     5701 tgattatatg cataaagacg cgataatata tgcttatctc caaaataatt ttccgtatat
     5761 ccgcaaacga ataaaggcgt gggaaagttt tacgctagat cgagaagata ttctattggt
     5821 gaaaagtggc gcaatatttg aagaaattag tgggaagaaa aaaggcatag cacgatgctt
     5881 tttttcgaaa agtttaattt ttcctactag aaatcaaata gtattgaaag ctttcgaaac
     5941 ttcagaaatt tgttttatca atgctgaaac agcttttggg aaattagaaa aagatcagat
     6001 tttatccaat ttttttctac agattgcgga gaaaaacgaa gaagacatgc gaagacaagc
     6061 atttcttggg acagagaact caaaaaataa aattatttca acgctcaact tcttgctaga
     6121 aaataataaa tctaataata aaacacccat ctttcctgaa tggcttcaaa taaatgtttt
     6181 ggcacagtta gcgaattgtt ccatctctac catttcttct actgtaaacg aattacatgc
     6241 ggaaggaata ttagatataa aatcttcgcc ctggaaactt aaaggcagag aaaagaggat
     6301 agaaattctt gaaaatgagc accagaaaat aaagcttaat gaaagaaagc ataagagtaa
     6361 tgttttctaa tggtataaga cttgaaaaaa ctttttgagt acttttccaa gcacaaaaat
     6421 tatactaaaa gaggtggaag taggacttga agaaaaatat tttagtcgta atgattgttt
     6481 cggtacttgc aattagtgca attgtatcag cttttttctt aatgagagac gatgcttatg
     6541 ctattgaaac ggaaggcttt acttatagcc cgaaaggaaa agtagtagat ttctcatcag
     6601 aagccaagta taacgataca tggattaaca atgagaaaac aataacagat aaaaaagaaa
     6661 tgaagccaat taacctagca agaacgttat ttttaaaaga tggacgaatt caatttttag
     6721 gaaaaagtgt agccgttaaa agcgcatcag atttgattga attaccatcc aaaacttcta
     6781 taacagaaag caaaggtagt tacaaagcaa aaagtgatag taataaaaca ttagcacaac
     6841 ttccaaaagg cacagttgta aaacttgcag aaggaagata tatcattttg gataatgcct
     6901 acctaaaaaa caaacaaggt cttaataaga aactacctaa aaacgtactt gtttccatag
     6961 acgaaaataa aaaagtgact ttaatgggcg ataaaaccat agaagaatta ggcggggatg
     7021 atgcttatat tgaaatggag aacaatcact atcactttga cttgaaaaaa gaaatgttgg
     7081 tcagtcaaac agctaaagaa acagatattg atattcgctc cattaaagtg gaaatagatg
     7141 ataatgccga aaaaagaagt ctaaaaacag ctaaagaaac agcaaatgaa acaacaaaag
     7201 attcaactca aaaagaacca gaaaaacagt cgaatgatac ttctggacaa aaaacaacgc
     7261 aaaataatga gacgtctgaa ggtaaagata atcaaacaca aggcgcgtct ggcaacaatg
     7321 caaatggaaa tgcaaataac aatacagcga gaagtaatgg aacaggcgga agtgattctg
     7381 gtgcaaacgg ctctcagccc ggtggtacgc agaataaacc aaatgaaggc gatgttaata
     7441 aagcgaatga aattattaaa aagctaaacg aagctgaaaa cacaaatacg tttcaagtac
     7501 caattgtgga tgtcaatttg acagttaaag gtcaagtggc tacagctaaa ctaaaactga
     7561 cagactcatc caaaaggcta aactccttag aagcaattct ttacgatagt aagaacaata
     7621 ttgtaaaaaa agaaaaattg aactcaacaa aagcgaatca aaacttcacc tttaacaatt
     7681 taaaatatgg cgaaacatat caagtagttg ttcagggaag ctacaagtca gcaagcaata
     7741 aaaatcaaga tactattttc ttccgccaaa cggttgaggc aaaaccggtt gttttaactc
     7801 caaaagtgac ggagcgcggc gaagattata tgaaagcgga actgactgca accgaacttt
     7861 acggtcaaat tgataagctg gttttaaaaa tcaaagaaaa caacagcaat gtaaccactt
     7921 ctcaaaaagt tactgttgat gcgagtcaat tgacaaaaga cggtcaagta gaagttaaat
     7981 ttaattcatt aagtagtgct aaagaataca ttatcgaaat ggaagaattg attgttgatg
     8041 gaaaaaacgt gacagatgat agttggtact ttatttcctc tacattaaaa gcgaaaccaa
     8101 caattgaagg cataaatctt tcatacagca cggataaagg cgaatttgtt gcgtcaccag
     8161 ttaatctaat tgacagagac gaatcaatta caagcattcg atatgtagcg tatttagaag
     8221 atgactataa agcaaatggt tctaatgcca aggaatacgc ttattctgta gtagatgcca
     8281 accaaaagaa aaccgctgtt aaagttggtc gaacagttga tatgaatgat ggtagttata
     8341 tttttgttgg ttatatttct ggcaataacg gtcagtctga ttatactttt gcaactccag
     8401 cttcgaacag tgtcatcgtt ggtaaaaaaa cgaagccaac tgtagagttt tctctgaaag
     8461 aagcagagca agataaactg acaatcaact atgaaatttt tgatgcagat aacacacttc
     8521 tttttgataa tctaacacat ccaaccttaa agctttataa gtcagacgct caagggatgt
     8581 atagtggaaa tcctgttgct acagttgatt taacaaagaa aagtgatatt acgaatttac
     8641 tagaattcga tggtttagaa agtgaagctt actatgttgt cgtaatgaca ggctcctata
     8701 atctggacga cggagcaggg attatggttg atgagcttat tggtcagtca agtgtcttcc
     8761 ggacaaccga aattacaaag gtcaacgcat ctttttcact tgattcagtt gatacaacaa
     8821 aagcaacaat taatgtcaaa ttatctgaag cggctgttaa tttaaacgac gctaatttaa
     8881 aaatttatga aaagaaaaca aatacacttg tcaaaacgat tccgctacac ggggattttg
     8941 agaagttaat gagcgatttg ggaaatagtt atccctttaa agatttaagt attaataaag
     9001 agtatcttgt gaaaatagaa gatggctatg atagtggaat gaatcatgtt ccagttgaag
     9061 ggcaatttat tttcaaaacc aagaaagaag cacctgaaac agacaaagta ttgcttgatt
     9121 acaaagcttc tgaaatgaaa ttaggaggcc tagcgggaat cgcggcaacg gaaaagccac
     9181 tgattgatga ttacaacgct gttagttcta ttacctatag tatctataaa gcagacgatt
     9241 taaacacacc gcttgtggag caagaagttt caacagcggc agactttgag aagcacgtgt
     9301 actttgattt aactaataag ctcttaggac gaggttattc ttatgtcata aaagcggatg
     9361 ttgtttggaa tgataattat gaagatcatc atattgaaat taattccgat acaatccaaa
     9421 tcaaaaaaga aaaaccaacc gttgaatacg aaattttaag ccgcacagcg agcgaaatta
     9481 aattaaatgt atatgtagaa gatgaggaag aatctatcgt accgggaacg cttgaaatta
     9541 ctagtacgac aggcggtaat gagcaacttc aaagtgggaa aaataatgta accttaccac
     9601 tttcaagcga gggaactaca acaattaaaa caacaggtga ttacattatt accagcggaa
     9661 gttcagctat ttcagatatt tttatgacga aacagttggc agcattaaat actactgcac
     9721 cacaagttgg agccaaaatt gccatggatg cttcaggcaa atcaatgact atcgccccag
     9781 aacctaatgc agttgcaaaa acttctgtga tgagaactaa atatgatttg aaagatgctg
     9841 caagctccaa accagattat tcaattacaa aatctggtcc taatcaattt aatactcaaa
     9901 accttaatct gcctataggt aatatttggt ttgataattc ctatcagcta acccttgata
     9961 tgaaaatgaa ttatacagaa aacaaaatcg ataaccaaaa cctagccaat aattactatc
    10021 tatctattgg aaatggagcg tcatttgtta gctctttaag cggagcggtt tcgacaacga
    10081 acaacgtaaa tagtgcggat gttttcaaag taacgaaagc aagcaccgat tcagaaggta
    10141 atatttccgg agttacattt aaaaatattt ggactgataa gtatatagct tatcgaaatg
    10201 gtattttgat tagtaatagc gagactcctg attcattcaa attaatccgt caagctgatg
    10261 gaagttatgt accagaattg agcggtcgct atgttagttt ctctgttgga ctagtaacag
    10321 atgaagcagc tggatcaaaa atcgatttat attcaactca ggaaaaatta gaacaagttt
    10381 cggaagctat ttctgtaaaa gcacttgaag agccagctat ttcagctgag aatattagtg
    10441 tttatgataa acgcgtcaaa atagatgtta ttggtgagga taaagacaat acaacggtta
    10501 agaaagataa caagaatgaa ctgtttgtaa atgtttataa agcagatgga acaacgctcg
    10561 ttaaatcaat tcggattgat ggactaccaa cacgcgatgt ttctgttaca gagctttcac
    10621 cagattcaga ttatgttgtt aaagttgaag ggaaatatga tttgttagat ggtaaaggcg
    10681 aaaaagacaa agtgtatttt tcagagacaa ttaagacaga aaaaagttta ccgagtatga
    10741 cttcaactga ttattcatgg aatccagcat atggtcagcg agcaattaaa ggaaatatcc
    10801 attttactga tgaaagtagc gtattaacaa atattgaata tcgtctgtac gatgctgcga
    10861 caatttcttc caatttatct aatttagtag ctttagagca agagttaggc aataaaactc
    10921 ccgtagctac atttgataat atgacaaata gtccagaatt ctctatatat aacagttctg
    10981 gagctcaaaa ttttgtttct ggaaaaacat atgtgattgc agcatatatg aagacaagtc
    11041 taacaagagc acctatcttc ctaagtgatg ccaaggagct ttatatttca ccgccaagtg
    11101 gtgtttctgc tccaatcacg ctagaaaatg tttcaacaag agaagcgact ctgaaattct
    11161 cttataatga tccacaaagt tattttgttg gcggaacaaa taaagaattc cagtacgtat
    11221 taaaaaacac gacaaatgga aaggaaatta aaaaaggatc gtttcaaggt gggaatacag
    11281 ctagttggat aaatactttt gaggaattag aacctgcaac aggatatacg ctaacaatta
    11341 gcacccaata cgataatcta aatggtggat tagtaagagc atggaatact agctttaatt
    11401 tcactacaga tgatgaatat gtaacttcga actcacttac cattcagcta gatgctggag
    11461 caaaagtagt taaattacag gctaaagaag tcaaaccagg atctacaacg attgaaaata
    11521 ttaaaatgga gttctatgag ctaatcgact atggaggcaa taatgaacat aatcaattag
    11581 ttgaaactaa aaatatcact ttaccaagtt cttatccagc aactattgca gcagatttta
    11641 atgtggcagg taagaagaaa aatcaaagtt tcttgggtaa aatgattgtc acctatcgaa
    11701 caccaacaaa tgaagttaaa acgtatgaaa aaacatctaa tttcattact ttacaagaag
    11761 atattgccgc aggattaaaa gcatttaaga gtgtgcgagc aacaaataag actttagaag
    11821 taaaattaga tactccgcaa gttaatttaa ccgataaagg agattacacg tatgaattga
    11881 agggcgaaaa tggtgaggta attgatacag aaaaagttgc agcggaagat atttctaaaa
    11941 ctgtatcgtt atcaatggag ccaacaagtg attatacgtt gactgtcatt aatccagata
    12001 accagcccgt cgcactttat caaggcaata acgaagaaaa taatctgaaa gctgaaatca
    12061 acaaagatag ttttacactg atgagcaata acacagccga tgctgaaact acaatgacag
    12121 taactgtaga gcctaaagaa ttaacagcat ggcaaacagt tcaatcctgg tttggtaaag
    12181 actttacaga aacttataac atccaaaaag atgagctaga tacaggtgtg aaaattgatg
    12241 caaattatca agacactaaa gttactgtcg aagaaacaaa atcaggaaag aattttggaa
    12301 ttattgaatt ggaggagagc aaatgaaacc tacatggaaa atagggataa tcgttgcagc
    12361 tgttccgtta ataattattg ctgtcgtctt atgggggtct tttaaggagg caaggtataa
    12421 tcttgtctct ctccctgatg acggtgtagt cctaaataat gagcaagaga cattgcaatt
    12481 tcaaaagggc aatacgcttt atcgcagttg gaatagtgat caattaattg cgaaaaacga
    12541 taaagaagat actcgaaacg aaattatgga gagtaccatc ctttatctaa ataaagaagc
    12601 cttaatgttt actaagagtg ttcccgtcat tgatacaaat ggggttagta gcaaactaaa
    12661 aggaagacaa gtctaccaac agaccaattc ttcctataaa tacaaaaact cagaaatcac
    12721 ggaaaacagt attgtaaaac tagcaaaccg tcaatactat ttaaacgcag atgcaacact
    12781 ttatcttggc ggcaaagaaa tcaaaaaagt gtcgaaacca ttacttttga ttgataaaac
    12841 aggaagcgtc actatttatg aaaacaaaaa gaaaagccgt tttcttggtc atatgacctt
    12901 gaaagtcaat gataaaacgg ttttagatgc tagtaacgaa acgtatactg ttggcgaacg
    12961 gaaaattgat ttagctagct ttggtggaac agacaatgaa aagatagtcg taaaagaaga
    13021 taagaaaaag accgcagaat ctgcgaaaga aaaagagtct gcgaagaaaa cagcaagtaa
    13081 ctcctctcaa tcagaaaatg aaagtaacca aacaacaaaa ggtacaggca atcaactcaa
    13141 tgctaccaaa aaatacggaa ataatttaaa tgttggaaat ggaacttctg attcggaacc
    13201 aaacgatggt aaggatacta aaaataatgg ttcaggaagt aatgcgaatg gtggtactaa
    13261 tcaatcagat ttaaatgaaa ttgataatta tgaagcaatc ttacgtaaaa tagaggactt
    13321 aaataaaaaa ttagagcgaa acattccagt gctaagaatc ggctatatcg cacctggagt
    13381 gactagcgtg aaagtcaact ataactatgt agatccgaat aacactttaa ttggtgtcac
    13441 taaaattagc gccgtagatg aaaaaactgg aaaaacagtt aatacgcaat atgtttcagc
    13501 agtagatacg gaagctacac taaaaggact ttcgccaaat ggcaagtatc atcttgaatt
    13561 tacctatcaa tatgatttag gaacaaataa aggcattcag gaagttaaaa tgcaaagcga
    13621 ctcttttaca acgcaaactg ttgccgcaat ttatcaaatg caaagcgtta caagcacaac
    13681 aatgaaagta aatatagcgc ttgatgcaca aattgatgat gttaaacgag caagaattaa
    13741 agtaaccaaa gcagatggag attttttcta tatgaatgtt agtgcgaatt ttttaaatgg
    13801 taacggagaa acgcttaatg taactgggct aagtcctaaa actgcttacc aattccaaac
    13861 gattattgaa atgaaaaacg gagaaaccat tgaattaaac agctccgaga aatattacac
    13921 tatgcaagca actgtactaa gaaatctaag agctagtcaa tctgtgaata aagttttaca
    13981 agtgcaatat gattggagtt cggctgatta tacattaaat caagcaacca tcgaactgga
    14041 agacgaggaa gataaaacag aagtagatta tcaaatcgtt aatcaagaaa aaggtaatat
    14101 tcatcttgtt ccagacacga aaagggagtt aatcaactta aaagccaaac tagtactcaa
    14161 aacgacaaat aataacacaa aagaaagcaa aacatttgag tatcctgtta agcaagaaat
    14221 tgaatacgac aaacaagcta aactaacaat ggacttaacg ccgtttcaaa ctgaagaaaa
    14281 cagtgagtta cagtctgaaa aacaagattt agtagcagag aaagaaacga acggaaatga
    14341 tttaacagct aagatggaag atgttttagc ccctcaaaac gcaacttatg atatgtcctt
    14401 ttcgatgcaa cgtaaagctc tcgaaacgta tcagttggaa tttgaaagga agatagctgg
    14461 gatagacgat gataattgga ccgtgtggaa gagtcaacaa gttacaacgg atgaagcagg
    14521 gcaagtgaag gttacagaaa ccatttcaaa actagctaaa gaaagcttcg attatcgtgt
    14581 agctgtatac gatgctcaag gtgcattaca actgtacgtt tatcaaaagt agtaaaaaat
    14641 gatatgcatt ttaatacaac aaactcaaac agaaggtagg aaacaacaat ggatttagta
    14701 gttgcatgta gcgtaattgg cgcggcactg gcaattgggc ttgcgacttt aggagcggca
    14761 attggacaag gaattgccgt aagtagagca acagaaatta tcggaaaaaa cccgaatgca
    14821 aagaaagaag ttatgggagg tctctttttg ggacttctca tgatagttgc attaatgcta
    14881 tttgcactgg caatcgcagt catcttgctt tgggttaatc cgtttatatg atgggtgaga
    14941 atatggagaa aatgattcaa acaataattc tatatagtgt tttcgcagta ggattcttat
    15001 atttactgca tttcacctta agaaaactag aaaatatctt gactagcttt ttttacgaag
    15061 tgagtcaaga tcagtcgctt gaaaaggaaa gtcttttacg ccgtttaaag cgacaaaaag
    15121 tagcaacaac acaagaagaa caaaaaaatc gtcaattggc tattgaatcg gaacaaaaag
    15181 aagagctttt tttagaagaa atcgatcaat taatagctca aaataaaagc tatgaacaac
    15241 aattgcaggc atgggaaaat gaaaagccaa agcaaatcgt ggaggtgcct agatttgaaa
    15301 caacaccaca cgcaccgtac aaatcactaa gtagttacat taatgaaatt tttcaacaag
    15361 tttttattga gtcggaagaa gatgaagcgc gtctatttac agaagcaatt cgggaatttg
    15421 atgcattagt tagaacagaa aaaatacgtt gtgcgctccc atacaaagtg attttgcagt
    15481 tatttgaaat gtattcgcca gaccagttac atttatttgc tcagtcattt cagagatata
    15541 gtgagcgttc gagtaaactt cctgtgaaac aaatttacca aagtagttat ttatcgccag
    15601 agcaaaaatt aaaagtgatg caagaagaag gtactttaga tgagttagat gctgaattta
    15661 tccaatttct tttttacatg atgacgcatt actcttaccg ccaaacgcgg aacctgtatc
    15721 gtaacttttt agaggtatac aatattcatt tttatacagg tcttatttgc atccatgtag
    15781 ctagcaaaga ttcagctaat cactttgaaa aactttggca gccggcgcat aggagctata
    15841 aaatcgagta tcaagtacaa aaagagttaa ttggcggagt gattattcaa tatggttcta
    15901 aatcaattga tatgagctac caggaattaa ttaaacgatc aacagaaaaa atggaagcgg
    15961 aagtgaaact ttgaaaacaa ttcattttga tatgaacaaa tacgaaaccc atgtggactt
    16021 ggaatatttg aaagaacatg gccgagtgga aaaaatttct gatggagtta ttttctgctc
    16081 aggcctagaa aatgcagcgc tacatcaggc tgttttaatt gatgaaaggc accgaggtgt
    16141 aattctggag ctcaatgagg aatttgttgg aatcggtttg attgataaga cgaatgacat
    16201 tttagaaggt atgcatgttg gggtctccgg caaatttatc gaagtagacc tatttgaaga
    16261 aatggcaggg cgtgttattg atactacagg aaaaatgctt tatgaagaaa gtgaagaaaa
    16321 gccgacagca acctctccac ttttctgtgt aactccagct attatgacga ttgatagtgt
    16381 aacacgcccg cttaatacgg ggcttgcggt gattgattct attacgccaa ttggtcgagg
    16441 tcagcgtcaa ttaatccttg gcaatcgcca gtctgggaaa acacaaattg ctgtggatac
    16501 gataattaac caacatgatc aaaatgtgca ttgcatctat gttgctattg gcttaaaagc
    16561 agcttatatc gcagaagtta ttgaaactct tcgaaatcat ggagcaatgg aatattctac
    16621 ggttgttgca actgcagcca gtgattccct taccgcgcaa tatttaacac cgtatgcggg
    16681 tatggcagta gcggaagcct tgcgagatca aggtaaagat gtactcatca ttttagatga
    16741 tttaaccaaa catgcggatg cttatcgagc aattacttta ctctttaacc gcccgccagg
    16801 aagagaagct tatccaggag atagttttta tattcactct agcctcttag aaagggccgt
    16861 tcaaatgaat gaagaacatg gtggcggttc tattacagca ataccgatga ttgaaactct
    16921 atcagatgat gtaacagctt atatccctac taatgttatc tctattacag atgggcaatt
    16981 atttttaaaa tcggatttat tcaaccgtgg tcaaaagcca gccgtagatg ttggtgtgtc
    17041 tgtttcaagg attggcggcg atgcacaaca cccaattata cgcaaattaa gtaaaaactt
    17101 aacgttgatt ctttcgcagt ttgaggaatt aaaagaatta ctcgattttg gtaatgcact
    17161 tgatgatggc agtatgaaaa tggtatcgga tggccgatta ttaacagaat tattcaagca
    17221 aaaaattcta agcccgttat cagtaacgga attaatcgtt attttatatg ctttccaaaa
    17281 tggctttcta acaaaaatcc cgcctgccaa tattcagacc ttcaaagacc ttttgctaga
    17341 aaaaacgcat atgcataaag attttgagtc gttttcagct cagatagaaa cgattaatga
    17401 actgaatgaa tcgcacatcg aaatgctaga agagatcatt cgggaagctg ggaggctttt
    17461 tagttgagta gcatagacca agcccgaaaa accattaaag cactaaattc aacctataaa
    17521 atagtccatg taacagaact agcgacactc ggaaaacttt ccgccttaag agaaaaagcg
    17581 gaagcggctg ttagttatta cgaaactatt ttaaaaagtt tgcgctgggt gagaaaaact
    17641 atgtacacca gtaataacca agtaaaagaa gaaaaaaatg ttactgctat tgcgataact
    17701 tctgagcgtg gtctttgcgg cgcctataat agtgaggttt ttgttgaaat cgaccagttg
    17761 attgaatcac tcggcgagca agtaacgata aattgggtag ttgtaggtga acaaggtcac
    17821 cgttatttaa caaaactagg tcagaatatc acctcttatt tacagttttc tcttgaaaat
    17881 attgatttag aaaccactac ggctgttact gctgatttta ttgacctaat tcattcggaa
    17941 caaatggacg cactatatgt gattttcacg aaatatttga atgcagttca atcagaagct
    18001 atgtgtgaaa aaatttatcc tgaaattcca gaagactcga atacggagga aattgaagta
    18061 gattatgtac tcgatttcga gacggatgat gagcaggtgg agcagttatt attagaaaac
    18121 tatttgtgtg gcttgcttta tagcatgttt cgttactcgg ttgccagtga atattgcatg
    18181 cgccgaatcg cgatgaaaca agccaaagac aatatccaga aacaattgga agaagctatt
    18241 tttaatgcca gaaagcaagc attacaacaa aaaactggcg aattactcga tatcattagt
    18301 ggagcacaga cgattaggaa ggacgaagaa taaatgaaaa aaaacacagg aaccattatt
    18361 agtattagtg gttttgtttt aaaaatcgaa tttaatgaga gcgaactgcc tgaaattggc
    18421 tttgcgcttg agtatcatac acatcaagga acttatctag ctgaagttgt tcaacatact
    18481 ggaattaata cagtgtctgc catcgctatt ggtgaggtaa gtggcttggc tagaggtacg
    18541 gaagtcgtta atttaggaca tccaattgaa gtacctgttg gggaaaccgt ccaaggaaga
    18601 atgctaaatg tatatggaaa agcgattgac ggcaaaccag aaccagctgc ggaagtaaaa
    18661 tggccaatat tccgtgacca gcctttactt cgagagctag atacgaataa agaaattctt
    18721 tacactggta ttaaagttat agatcttatt tgtcctattt taaaaggtgg gaaaacaggt
    18781 ttattcggtg gagcgggtgt agggaaatct gtcttaatgc aagaattgat taataatatc
    18841 agtatgcttg gtggtaactc tgtatttact ggggttggag aaagagttag agagggaatc
    18901 ggcttgtata aagaattaga agcaagtggt gtgctccctc aaacaaccgt tgtacttggt
    18961 caaatgaatg aatctccagg tgtacggatg cgcgtggcat taacaggact aacgattgca
    19021 gaatatctac gagatgaaga gaaaaaagat gttttattat ttatagataa tgtcttccgc
    19081 tttattcaag cgggttctga agtttcttct ttacaaggaa aaattcctat tactggaggt
    19141 taccaatcca cactttccaa agaggtcggc gattttcaag accgcatcgc gtctactaaa
    19201 aatggctcta ttacctcgat tcagtgtgta tttttaccag cagatgatat tgatgatcca
    19261 tctgcagttg cgacgtttag ccatctagac tcaacaattg tattagagcg ttcgattgcg
    19321 gcacttggga ttttcccagc ggttaatcca cttcaatcat tctcaagagc actcaatcca
    19381 acctttgttg gcgagcgaca ctaccaatta gcggcgcaag tgaaatttat cttacagcgt
    19441 tatatggaac tgcaagaaat catcaacgta cttggaatgg cagaattaag tgatgaagat
    19501 agaaaactag ttcatcgtgc aaggaaaatc cggaatttcc tttcacaacc attctatgtt
    19561 tcggaaaaat tcactggaac agaaggcaca tttgtagaaa ttgaagattt gctagggagt
    19621 atcgaacgca ttttgaacgg tgattatgat gaacgctcag aacgtgattt cctatttatc
    19681 ggatcctaca aagacttgaa ataggaggag aaggaaatga aacttaaaat cgtctcgcct
    19741 atggggcagt tttttgaagg agaagtagag ggctttgtta ttaatacaaa agaaggacaa
    19801 caaaccgtgt tagaagagca tattgattgt ttaagctttt ttgactatag tgaaatcagt
    19861 attttagatg cagttgcttc ggacccaatc tttgtggcac ttggatattt acatttagta
    19921 caaaatgaag caaatatcat ggcacagttt gcttctacgg atgccgagca agcggagcgg
    19981 atttttgaaa gactaaacaa gcgaaaacaa acagagagta ggcggtccga tgacaagcga
    20041 attttttagt acacttctgt tgattattgg tttattactt ggtttttttc tggcgatatt
    20101 attgattttg gtggggattc ggcgcttttt atgtagcgct gaggaaccct taaaacgaat
    20161 ccagcgctat caattatggc ataatcgcta tcagttaaat gcagaggtta cttctttttt
    20221 aattgttatt ggagcatcac tttcagtaag ccttattaca ttacaaatta ccgcaattcc
    20281 ttttcaatat acggtgctaa tattttggag tagttggcta ttccacttac tttctttttg
    20341 gaagaagata agagtaccta aaaaaatgaa gaacgaaatg aagcaattag caggatttct
    20401 tttgatcaca gtgctttatt ttgttggttt ttttgcaatg aagtcagtgc atttttctat
    20461 tatacaagta gcagattttc cgggagttat tcagttcgga ataagaacct atctaactat
    20521 ttgtagtttt tttgtggcgt gtggggcatt aattgtttgg cagcgcatct atgtgaaact
    20581 actaaaatga ctaagaatgt gaataaagca taaccaagaa aagtgaggat gtctacgtgg
    20641 catccttttt tataaatgaa tataaaaaaa gaatttttct aacatatttc taacatactt
    20701 gtactatact ttaaataagc tgttgattag ccataagaaa atgaacgaaa ggaagtaaat
    20761 tcaaatgact tttttagaat tccatcaatt ggtcaaagaa gatttgttga tttattcatg
    20821 gattataaaa aattttcacc ttacgcgtca aaaattaatg gcgggtggcg aaataacgat
    20881 gaaccgtgaa caagtaatag tcatggagaa aggtttacta gtacaagtaa acgaggaagg
    20941 taaagatgat ttgtatcgtg tttttatcga tcaacgaatt atttttacaa caaaaggaga
    21001 cattacctta acggcgttag aagataccac ttatagcatc attcgagcag aagaattaat
    21061 tggaaaatta gaagaccaac atttattacc aacatttttc ttagaaatag cggaagactt
    21121 tgagaaaggt ctagactggc aaagaacgct aatttctgtt gatcctgcag aacgtgcgga
    21181 aatgattttg gcgaaaatta tcgagcgtta tcaaataaat tcagagaaca aaccagaatt
    21241 tccaagatgg ttaagaataa atgtactagc aagatttgcc aaatgctcag tgtctactat
    21301 gtcgtcagtt gtaaacgaac tagtcaatga aggtgactta aatataaaag gaacaccttg
    21361 gttattgact cgaccttatc aggcaacttg tgcttaaaac agacctgtaa aaaaccacgc
    21421 ttaaatgaca tttgcgtggt ttttttacgc gatctataaa aaaagataaa tttattacgt
    21481 ttttttgata tagatacaac aattttcaga tacactaaat aatcaaaacg ta
//
LOCUS       DASDYO010000039        20985 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.039, whole genome shotgun sequence.
ACCESSION   DASDYO010000039 DASDYO010000000
VERSION     DASDYO010000039.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 20985)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20985)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20985
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.039"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..306)
                     /gene="era"
                     /locus_tag="U0290_001235"
     CDS             complement(<1..306)
                     /gene="era"
                     /locus_tag="U0290_001235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEM2301280.1"
                     /translation="MSEPFKSGFVAIVGRPNVGKSTLLNHIIGQKIAIMSDKAQTTRN
                     KVQGVYTTDESQIIFIDTPGIHKPKHKLGDFMVKIALNTFQEVDLIYFVIDASTGFGR
                     "
     gene            complement(303..698)
                     /locus_tag="U0290_001236"
     CDS             complement(303..698)
                     /locus_tag="U0290_001236"
                     /EC_number="3.5.4.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytidine deaminase"
                     /protein_id="HEM2301281.1"
                     /translation="MKENNFISLAKQAREFAYVPYSKFPVGAALVTKDDEVVLGCNIE
                     NASFGLTNCAERTAIFKAVSEGKRDFKQLVVVADTDGPVSPCGACRQVISEFCAPDMP
                     VILTNLTGKTATVTVKELLPGAFTSEDML"
     gene            complement(723..1118)
                     /locus_tag="U0290_001237"
     CDS             complement(723..1118)
                     /locus_tag="U0290_001237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family protein"
                     /protein_id="HEM2301282.1"
                     /translation="MLMDLKDRKYKRSKNYAESFHHAFTGLKTAFLEERNMRFHTFAA
                     LAVVICGFFFHVTKSEWILLILSIFGVLTLEMVNTAIERAVDVATEQYIDEAKKAKDV
                     AAGAVLLAAIVASFIGLIIFIPYFCQMFL"
     gene            complement(1096..1581)
                     /gene="ybeY"
                     /locus_tag="U0290_001238"
     CDS             complement(1096..1581)
                     /gene="ybeY"
                     /locus_tag="U0290_001238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rRNA maturation RNase YbeY"
                     /protein_id="HEM2301283.1"
                     /translation="MTVLEIDLLDETKNLLDEDKQLVENILQFAAEYLKIEQGTELSL
                     TFTTNEGIREINREYRDKDQATDVISFALEEMGDGETEIDWGEFDLETPRMLGDIIIS
                     TEKAEEQAKDYGHTKARELGFLAVHGLLHLLGYDHMEPDEEKIMFGLQKEVLDAYGLE
                     R"
     gene            complement(1598..3754)
                     /gene="pgpH"
                     /locus_tag="U0290_001239"
     CDS             complement(1598..3754)
                     /gene="pgpH"
                     /locus_tag="U0290_001239"
                     /EC_number="3.1.4.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP phosphodiesterase PgpH"
                     /protein_id="HEM2301284.1"
                     /translation="MKLAKKWRDWYIESGKKYLFPLLLVCFAVVAYFLVCQMTKPESY
                     NVKLFQVAEKTIRSPQTVEDTEKTKEERTKASDAVEDVYVYNRETGQNRVALIQSLFA
                     YVNEVNAEAQEKDTKNKEKAKKENKPAPAPTSTEDKLKNLKDKLSSNVSEKITSNISD
                     EVFTTLIEAKSKDFNVMEDVVTTEVEKSMENKIRDENLNSVKIRARDDIELSAIPAYY
                     KNVSKALVSYAIVPNEVYDEEQTDARRKEAAQSVVPVKILQGQVIVQEGQIVDRETYR
                     QLKMLHLLDQKMPVKQYAGFAIFIIALAAILFLYTKKQTQPKAKKMQTMLIFSSVYLV
                     SLFMLLIILFLETQNIANIAFLFPAAFAPMILKILLNEKYAFLSVIFIAVTSLLTFQN
                     DATSGITIFILLSGATSVVVLRDYSRRSAIMLSGFMVGLINMVYVLLLLLINNSTLLQ
                     VSTLMAIGYAFLGGFGAFILGVGVIPLFETIFGLLTTSRLVELANPNHPLLKKILMKA
                     PGTYHHSMMVANLAEACADKIGANSLLVRVGCFYHDIGKTLRPPYFVENQLQGINPHD
                     RLTPEQSRDIILSHTKDGAEILKENHMPQPIIDIALQHHGTTLLKYFYFKAKETNPDV
                     KEADYRYSGPKPQTKEIAIINISDSVEAAVRSSTEPTMAKITEIIDGIIKDRFLDGQF
                     TECDITIQEIKIIRDTLIATLNGIYHQRIQYPDDKD"
     gene            complement(3770..4729)
                     /locus_tag="U0290_001240"
     CDS             complement(3770..4729)
                     /locus_tag="U0290_001240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhoH family protein"
                     /protein_id="HEM2301285.1"
                     /translation="MLNEFNEVVELSDDTNIQDLFGNNNKNIELLEELLQVKIITRGE
                     SLSITGEEEPVQHTTAVLNELILTVKRGIHIDGRDIAQAVKMQRNGTLIYFHTLFEEE
                     ITKNAKGMPIRPKTFGQRTYIQMIKKHDIVFGVGPAGTGKTYLAVVMAVDAWKKGNVS
                     KIILTRPAVEAGESLGFLPGDLKEKVDPYLRPVYDALYDIFGTEHTTRLMDRGVIEIA
                     PLAYMRGRTLDHAFVILDEAQNTTIAQMKMFLTRLGYDSKMIVNGDMTQIDLPKGATS
                     GLVNAEQVLKDVKDIGFVYFEHHDVVRHPLVAEIIKAYEGKQN"
     gene            complement(4917..5363)
                     /locus_tag="U0290_001241"
     CDS             complement(4917..5363)
                     /locus_tag="U0290_001241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GatB/YqeY domain-containing protein"
                     /protein_id="HEM2301286.1"
                     /translation="MTLLDKLNEDMKQAMRDKEKEKLSVIRMLKAALQNEAIHQGVKD
                     LTPDDEVTVISRELKQRRDSLAEFDKAGRNDLSDKVRSEIVIVEDYAPKQLTPEELEN
                     IVKATIEEVGASSKADFGKVMSAIMPKVKGKADGGAVNQFVKKYLS"
     gene            complement(5383..5556)
                     /locus_tag="U0290_001242"
     CDS             complement(5383..5556)
                     /locus_tag="U0290_001242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_016998564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S21"
                     /protein_id="HEM2301287.1"
                     /translation="MSKTVVRKNESLEDALRRFKRTVSKSGTLQESRKREFYEKPSVK
                     RKKKSEAARKRKF"
     gene            complement(5754..6521)
                     /locus_tag="U0290_001243"
     CDS             complement(5754..6521)
                     /locus_tag="U0290_001243"
                     /EC_number="2.1.1.193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003732345.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (uracil(1498)-N(3))-methyltransferase"
                     /protein_id="HEM2301288.1"
                     /translation="MQRYFVTNELENDNETLSITGENFHHITRVMRMKESDQVFIVFP
                     SKKTCIAAITAINDDEVFLNLVKWLEEDTELPIEITIASGLPKGDKLELIIQKSTELG
                     AHKFIPYKAERSVVKWDDKKVIKKIERLQKIAQEAAEQSHRTIIPEVHYAASFKELMF
                     DHVHYDFVIAAYEESAREGEDSALANLFQTMKPGQSVLCVFGPEGGISEKELMQLQEV
                     NAKLAGLGPRILRTETAPLYCLSAASFYFDLYKNKKE"
     gene            complement(6522..7466)
                     /gene="prmA"
                     /locus_tag="U0290_001244"
     CDS             complement(6522..7466)
                     /gene="prmA"
                     /locus_tag="U0290_001244"
                     /EC_number="2.1.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L11 methyltransferase"
                     /protein_id="HEM2301289.1"
                     /translation="MEWSEVEVHTTNEAVEPVANVLTEFGAAGVSIEDVADFLRERED
                     KFGEIYALRREDYPEDGVIIKAYFLKTTEFVEQIPEIEQTLKNLSTFDIPLGNFQFVV
                     NDVDDEEWATAWKKYYHPVQITDRITIVPSWESYTPSANEIIIELDPGMAFGTGTHPT
                     TQLCIRALSDYLQPGDEVIDVGTGSGVLSIASAKLGAKSILATDLDEIATRAAEENIT
                     LNKTEHIITVKQNNLLQDINKTDVDIVVANILAEVILLFPEDVYRALKPGGIFIASGI
                     IEDKAKVVEEALKKAGLVIEKMEQQGDWVAIISKRGVE"
     gene            complement(7538..8668)
                     /gene="dnaJ"
                     /locus_tag="U0290_001245"
     CDS             complement(7538..8668)
                     /gene="dnaJ"
                     /locus_tag="U0290_001245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaJ"
                     /protein_id="HEM2301290.1"
                     /translation="MAKRDYYEVLGVSKSASADEIKKAYRKLSKQYHPDINKEAGADE
                     KFKEISEAYEALSDPQKRAQYDQYGHVDPNQGFGGGAGGGFSGGGFSGFEDIFDTFFG
                     GGGRQQDPNAPRQGSDLQYTMRLKFKEAIFGKDAEIEIPREENCDTCHGSGAKPGTTP
                     EKCSHCGGKGSINVEQNTPFGRVVNKRTCQYCNGTGKEIKEKCPTCHGKGRVTKTKKI
                     KVKVPAGVNDGQQMRVSGEGEAGINGGPNGDLYVVFVVIPDEFFEREADDIYVEVPIT
                     FVQATLGDEIDVPTVHGKVRLKIPSGTQTGTTFRLRGKGVPHLRGNGTGDQHVIVKVI
                     VPKKLDDKQKEILREFASTTGDKVDEQTSGFFDKMKRAFKGD"
     gene            complement(8810..10651)
                     /gene="dnaK"
                     /locus_tag="U0290_001246"
     CDS             complement(8810..10651)
                     /gene="dnaK"
                     /locus_tag="U0290_001246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molecular chaperone DnaK"
                     /protein_id="HEM2301291.1"
                     /translation="MSKIIGIDLGTTNSAVAVLEGGEAKIIPNPEGARTTPSVVGFKN
                     GERQVGEVAKRAAITNPNTISSIKRHMGTNYKETIEGKDYSPQEISAIILQYLKSYAE
                     DYLGETVDKAVITVPAYFNDAQRQATKDAGKIAGLEVERIINEPTAAALAYGMDKTET
                     DQTILVFDLGGGTFDVSILELGDGVFEVHSTAGDNELGGDDFDKKIIDYLVAEFKKDN
                     GIDLSQDKMALQRLKDAAEKAKKDLSGVTSTQISLPFITAGEAGPLHLEVTLTRAKFD
                     ELTHDLVERTIAPTRQALKDANLSASDIDQVILVGGSTRIPAVQETIKKELGKEPHKG
                     VNPDEVVAMGAAIQGGVITGDVKDVVLLDVTPLSLGIETMGGVMTTLIERNTTIPTSK
                     SQTFSTAADNQPAVDIHVLQGERPMAKDNKTLGRFQLADIPPAPRGIPQIEVSFDIDK
                     NGIVTVRAKDLGTGKEQNIVIKSSSGLTDEEIEKMVQDAEANAEEDKKNKENAELRNN
                     ADQLVFTVDKTLKELEGKVEEEEVKKAEAARDELQEALKGEDFEAIKEKTESLNEIVQ
                     NLSVKLYEQAAAEQQAAGGAEGQEAPQNDDVVDAEFEEVNDDDKENK"
     gene            complement(10685..11260)
                     /gene="grpE"
                     /locus_tag="U0290_001247"
     CDS             complement(10685..11260)
                     /gene="grpE"
                     /locus_tag="U0290_001247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide exchange factor GrpE"
                     /protein_id="HEM2301292.1"
                     /translation="MSEKKNKKERLADEIEQEELNILDETEETVEEEAAADTLTEEQA
                     KILELENKLDEVENRYLRMQADFENVKKRHIADRDASQKYRSQSLAQDLLPALDSFEK
                     ALATTSDQEEVKQILKGMEMVYNQILVAFEKEGIEVIPAVGEQFDPNFHQAVMQDSDE
                     NAGSNEITAELQKGYKLKDRVIRPSMVKVNQ"
     gene            complement(11302..12339)
                     /gene="hrcA"
                     /locus_tag="U0290_001248"
     CDS             complement(11302..12339)
                     /gene="hrcA"
                     /locus_tag="U0290_001248"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heat-inducible transcriptional repressor HrcA"
                     /protein_id="HEM2301293.1"
                     /translation="MLTERQLLIFRAIIDHFTWTIQPVGSKNLLKEKGLPYSSATIRN
                     EMGVLEEYGFIEKTHSSSGRVPSEKGYRFYVDYLLQPKKLDKSDRQMIRSFFSENYYE
                     MEGLIQNSALMLSDLTNYTSILLGPEATKNHLSGFRFVPINNFQAMLILITDQGHVDN
                     HLVTIPEGTTLSDIERMVNILNERLVGLSLDDLKVQIPMEVKELLGKHVRNYESFMHV
                     FSDSFAQASQQKVYFGGKTNILNQPEFHDINKVREMLHLMEEEQDVYELFRDIPDGLQ
                     VKIGRENNNSLMEDCSIITATYNIAGERVGGIVLLGPTRMEYSRMMGLVDVMSRDLTD
                     VLTKLYRDNQN"
     gene            complement(12486..13643)
                     /locus_tag="U0290_001249"
     CDS             complement(12486..13643)
                     /locus_tag="U0290_001249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-independent coproporphyrinogen III
                     oxidase"
                     /protein_id="HEM2301294.1"
                     /translation="MINTNQSSKESSAVYIHIPFCEHICYYCDFNKVFLEGQPVDEYV
                     DLLIKEMELTAAKGPIAPVDTVFVGGGTPTTLNEAQIARLCTAIHNILPLKKDIEFSF
                     EANPGDLSLSKLQAMQDHGVNRISMGVQSFNNELLKKIGRIHTVKDVYQSVENMRKIG
                     FENVSIDLIFSLPGQTEADFQDTLKQALDLDLPHYSAYSLIIEPKTIFYNLMQKGKLF
                     LPGQDAEANMYDLLLNEMEKHGRKQYEISNFAKEGFQSKHNITYWSNEHYYGFGAGAH
                     GYVGNTRYSNFGPIKKYMEPLQKNILPTFQQKELTLKEKMEEEMFLGLRKVDGVDKKH
                     FKQKFGQDLDATFANAIQKTTAKGWLENNEENVALTRSGRFLGNNVFQEFL"
     gene            complement(13732..14760)
                     /locus_tag="U0290_001250"
     CDS             complement(13732..14760)
                     /locus_tag="U0290_001250"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldehyde reductase"
                     /protein_id="HEM2301295.1"
                     /translation="MKNNVLVTGGTGFLGMHIIFQLLQQGYQVKTTVRSLKSKEKVIE
                     VLQNNGITDFTQLSFVELDLSKDEGWKEAMLDCKYVLSVASPVFFGKFKNEEELIRPA
                     IEGITRILQAAKEAKVKRVVMTSNFGAIGFSNADKNSITTEAYWTDELAKGLSAYEKS
                     KLIAEKEAWKFMENETELEFATINPVAIFGPSQSSHVSGSFDLLKNLLNGSMKRIINI
                     PLNVVDARDVADLHIRAMITPEANGERFIASADGEISMADIAHLLQRERPELVSKMPK
                     KTLPNAAIRAAAIFSKHAKEGELMINMNRQISNSKARDLLGWQPISTKEEAVLAAVDS
                     LAKYGLLD"
     gene            14873..15310
                     /locus_tag="U0290_001251"
     CDS             14873..15310
                     /locus_tag="U0290_001251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2301296.1"
                     /translation="MTYSIKEVSKIFNLSIYTLRYYDKQGLLPFVSKNQSGYREFTES
                     DLNLIHTICCLKNTGMPLKQIRTYIDYCMEGPVSIEARKQLLLDHRAAVLKSLEDLTE
                     NLKEVDVKIAKYSSPDAVEIITAERNYVSMEKKKHDLIYPYNI"
     gene            complement(15356..17182)
                     /gene="lepA"
                     /locus_tag="U0290_001252"
     CDS             complement(15356..17182)
                     /gene="lepA"
                     /locus_tag="U0290_001252"
                     /EC_number="3.6.5.n1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor 4"
                     /protein_id="HEM2301297.1"
                     /translation="MNKEEMNARQKKIRNFSIIAHIDHGKSTLADRILEQTGALTHRE
                     MKNQLLDSMDLERERGITIKLNAVQLKYKAKDGETYIFHLIDTPGHVDFTYEVSRSLA
                     ACEGAILVVDAAQGIEAQTLANVYLALDNDLEILPVINKIDLPAADPERVREEIEDVI
                     GLDASDAVLASAKSGIGIEDILEQIVEKVPEPSGDVNKPLKALIFDSVFDAYRGVIAN
                     IRIMDGVVKAGDRIKMMSNGKEFEVTEVGVFSPKATPRDELLVGDVGYLTAAIKNVGD
                     TRVGDTITLANNPAEEALDGYRKLNPMVYCGLYPIDSSKYNDLRDALEKLELNDSALQ
                     FEAETSQALGFGFRCGFLGLLHMEIIQERIEREFNIDLITTAPSVIYHVNLTDGSNIV
                     VDNPAEMPEPGVIESVEEPYVKATVMVPNDYVGAVMELAQNKRGNFITMEYLDDIRVS
                     IVYEIPLSEIVYDFFDQLKSSTKGYASFDYELIGYKASKLVKMDILLNAEKVDALSFI
                     VHRDFAYERGKIIVEKLKELIPRQQFEVPIQAAIATKIVSRSTIKALRKNVLAKCYGG
                     DVSRKRKLLEKQKEGKKRMKQIGSVEVPQEAFMAILKMDESK"
     gene            17427..17681
                     /locus_tag="U0290_001253"
     CDS             17427..17681
                     /locus_tag="U0290_001253"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S20"
                     /protein_id="HEM2301298.1"
                     /translation="MPNIKSAIKRVKTAETRNSRNASQRSAMRTAIKKFDEAAANNAD
                     NAKDLYVEASKKLDSAVSKGLIHKNNAARNKSRLAAKLAK"
     gene            complement(17767..18798)
                     /gene="holA"
                     /locus_tag="U0290_001254"
     CDS             complement(17767..18798)
                     /gene="holA"
                     /locus_tag="U0290_001254"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465006.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta"
                     /protein_id="HEM2301299.1"
                     /translation="MLPEWKQIRSKKIMPVYLIIGTEDYIINETKQLLIDNILEGEEV
                     EFNYANLDLEEMPIEVVIQEAESMPFFGDKRLVMANNPLFLTTEKSKNKVEHDTAKLE
                     AYLNEPVDYSVLCFVARVEKLDERKKLTKLLKKTATVIEAKRPNENELKKWIEAKLSE
                     NNMQMSQEAITRLVELTSGQLTTAMNELQKLMLYCFDSKEITIQDVESLVVRSLEQNI
                     FLLLDKMIAMDISGALRIYYDLLKQKEEPIKILALISSQFRLLNQLKLLEQQGYSQQQ
                     AATKLKVHPFRVKLASKQAKNFTELQLNQALKRLAEIDLEMKTGFGDKEQKLEWFLFE
                     LQDNRQKRV"
     gene            complement(18866..20935)
                     /locus_tag="U0290_001255"
     CDS             complement(18866..20935)
                     /locus_tag="U0290_001255"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003766928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA internalization-related competence protein
                     ComEC/Rec2"
                     /protein_id="HEM2301300.1"
                     /translation="MEKFNTSSFTATEYNGNCQIIDNLKIDGDSFQTFVRCEKEKFQL
                     SYKITTEEEQQKLKKLHYGQFISVSANIETPSVNRNQNQFNYQTYLKNQNVHYILRAS
                     NLAISSQFSPSFLMKLQNIRLKIITHLTEKISPTISPYCLALISGEKNGFSPEMYEVY
                     QQMGVVHLLAISGLHVNLLIGAIYFLLLKFGITRDRAITCLLVFLPFYVILTGANPPV
                     IRAATMTALLLLSEKYTTKWSSFSAICLSFILFFLLQPYIIREVGFQLSYAVSFGIIL
                     SSRQILTRQQNAFTKSLAISFISTIMSSAVMMYHFYSFSWVGIFFNLIYVPIFTMIIL
                     PGCLTVFVLSFFSTEIFHFPEAMLTFFIQLVEKLTYIFAKIPHQTIVTGRPNTVILVL
                     TIITIIIVFSQWQKKKFPLGIFICFCLLCYLASFNFSGKVSFIDVGQGDSILIQLPYN
                     QGNYLIDTGGQLPFEKEAWAKKRKPFTIGGSTLSPVLKSKGINSLDKVIITHSDADHM
                     EGLDDLQKNITIKELIFAKGAENKPIMKEALAAMPKVKQTIILAGAKWQIGENSFECL
                     YPDKAGEGGNDDSIVLKAVLDGKIWLFTGDLEANGEKGISEQPIKADILKVGHHGSKT
                     SSSKEFIQKVKPTFAVISCGLNNRFGHPHAETINTLEKAGVTILRTDVQGEITYTFGK
                     GFEATLK"
BASE COUNT         5890 a         4154 c         3590 g         7351 t
ORIGIN      
        1 gcgtccaaat ccggtagatg cgtcgattac gaaataaatt aagtctactt cttggaacgt
       61 atttagcgca atcttcacca tgaaatcgcc taatttatgc tttggtttat gtatacctgg
      121 tgtatcaata aaaataattt gtgattcatc tgttgtataa acaccttgta ctttatttct
      181 tgttgtttga gctttatcac tcataatggc aattttttgg ccaatgatgt gatttaataa
      241 agttgatttc ccaacgttag gccgcccaac tatagctaca aatcctgatt taaatggttc
      301 actcataaca tatcctccga tgtgaatgcg cctggtaaaa gttctttcac cgttaccgtc
      361 gctgttttcc ctgttaagtt tgttaatatt actggcatat ctggcgcaca aaattcactg
      421 atgacttgtc tgcatgcccc acacggcgaa actggaccgt ctgtatccgc tacgacaact
      481 aactgtttaa aatctcgttt tccttctgat acagctttaa aaatagctgt ccgttctgcg
      541 cagtttgtta aaccgaatga tgcattctcg atattacagc caagtacaac ctcgtcatct
      601 ttcgtaacaa gagctgctcc tactggaaat ttcgagtaag gaacatacgc aaattctctt
      661 gcttgtttag cgagtgagat aaaattattt tctttcattt accaagtcac aatcccttct
      721 ttttataaaa acatctggca aaagtatggt atgaatataa tcagtccaat aaaacttgct
      781 acaattgctg ctaacagtac cgctccggca gctacatcct tcgctttttt cgcctcatca
      841 atgtattgtt ctgtcgccac atctaccgct cgttcaatcg ctgtgttcac catctctagc
      901 gttaacacac caaaaataga aaggattaat aaaatccact cagatttagt tacatgaaag
      961 aaaaagccac agatgacaac agcaagcgct gcgaaagtat gaaatctcat attacgttct
     1021 tctaaaaaag cagtttttag tccagtaaaa gcatgatgaa aagattctgc ataattttta
     1081 ctacgtttgt attttctatc tttcaagtcc ataagcatcc aacacttctt tttgtaagcc
     1141 aaacatgatt ttctcttcgt caggctccat atgatcatac ccaagcaagt gcagcaatcc
     1201 atgaactgct aagaaaccta attctcttgc ttttgtatgt ccgtaatctt tggcttgctc
     1261 ttctgctttt tcagtcgaaa taattatatc gccaagcata cgaggcgttt caagatcaaa
     1321 ttcgccccaa tcaatctccg tttccccgtc gcccatttct tctagcgcga acgaaataac
     1381 atcggttgct tgatctttat cccgatattc tcggttaatc tcacgaatac cttcattcgt
     1441 tgtaaaggtg agtgacagct ctgtcccttg ttcgattttt aaatactcag ccgcaaattg
     1501 taaaatattt tcaactagct gtttatcttc atcaagtaaa ttcttagttt cgtctagtaa
     1561 atcaatttct aagaccgtca tcttttgtcc tcctatttca atctttgtca tcaggatatt
     1621 gaattcgttg atgatatatt ccatttaatg tggcgattaa ggtgtcacga atgattttaa
     1681 tttcttgtat tgtaatatca cattctgtaa attgcccatc aaggaaacga tctttaatga
     1741 ttccgtcaat aatttctgtt atttttgcca tggttggctc tgtggaagaa cgaactgccg
     1801 cttcaacact atccgatata ttgataatgg cgatttcttt cgtttgtggc tttggaccac
     1861 tgtaacgata atctgcctct ttcacatctg gatttgtttc tttcgcttta aaatagaaat
     1921 atttaagcag tgtcgtcccg tgatgttgga gtgcgatatc aataattggt tgtggcatat
     1981 gattttcttt taaaatctct gctccgtctt ttgtatgcga aagaattata tcacgacttt
     2041 gttctggtgt cagtctatcg tgcggattta ttccttgcaa ttgattttcc acaaaataag
     2101 gtggtcttaa tgtttttcct atatcatgat aaaaacagcc aacacgaaca agtaaactat
     2161 tggcaccaat tttgtcagcg catgcttctg ctaagttagc taccatcata ctatgatgat
     2221 acgtaccagg agctttcatt aatattttct tcaataatgg atggtttgga ttagctaatt
     2281 cgaccaaacg actcgttgtt aacaatccaa aaatcgtttc gaataacgga ataactccta
     2341 ctccgagaat aaatgcgcca aatccaccta aaaaggcata tccaatggcc attagtgtag
     2401 aaacttgcaa cagtgtgctg ttatttatta ataataaaag taacacataa accatattaa
     2461 ttaaaccaac cataaaccca gacaacataa tagccgaacg tctactataa tcgcgtaaca
     2521 caacaacact cgtcgcgcca ctcaataaaa taaaaatagt tatgccgctt gtagcatcat
     2581 tttgaaatgt taacaaacta gttacagcaa taaaaatgac gcttaaaaag gcatatttct
     2641 cattgagtaa aattttgagt atcatcgggg caaaggcggc tgggaataag aaagcaatat
     2701 tcgcgatatt ttgcgtttct aaaaataaaa taattaataa cataaacaaa gaaacaagat
     2761 aaaccgaaga aaaaataagc atcgtctgca tttttttcgc tttaggttgt gtttgttttt
     2821 tcgtgtaaag gaatagaatt gctgctaaag caataatgaa aatcgcaaat ccagcgtatt
     2881 gttttacagg cattttttga tcaagtaaat gtagcatttt tagctgacga tatgtttctc
     2941 tatctacaat ttggccttct tgaacaataa cttgcccttg taagattttc acaggaacaa
     3001 cggattgcgc agcttcttta cgtcgtgcat cggtctgctc ttcatcgtaa acttcattcg
     3061 gtacgatagc ataggaaact aaggcttttg agacattttt gtagtaagcg ggtatcgctg
     3121 aaagttcaat atcatcacga gctctaattt ttacagaatt caagttttca tctcggattt
     3181 tattttccat ggatttttca acttctgttg taaccacgtc ttccatgaca ttaaaatctt
     3241 tacttttcgc ttcgattaaa gtagtgaaaa cttcgtcaga tatgttagaa gttatttttt
     3301 cagatacgtt actagataat ttgtctttta agttttttaa tttatcttca gttgatgttg
     3361 gcgcaggagc aggcttattc tctttttttg ctttctcttt attcttggta tctttttctt
     3421 gcgcttctgc gtttacttca tttacatagg caaataaact ttggataagt gctactcggt
     3481 tttgaccagt ttcgcgattg tagacataca catcttctac agcatcgctt gctttggttc
     3541 tttcttcttt tgttttttct gtatcttcca ccgtttgagg tgaacgaatt gttttttcag
     3601 ccacctggaa tagtttaaca ttgtaagatt ccggtttcgt catttggcaa acgagaaaat
     3661 aagctacaac tgcaaagcaa acaaggagca gcggaaaaag gtatttcttt ccactttcga
     3721 tgtaccaatc tctccatttc ttggctagtt tcacatcttt gtctcctctc taattttgtt
     3781 tcccttcata agctttaata atttcagcaa cgagtgggtg tctgactaca tcatgatgtt
     3841 caaagtaaac aaaaccgata tcttttacat cttttaaaac ttgttctgca ttgacaagac
     3901 cgctagttgc accttttggt aagtcaattt gtgtcatatc tccattgaca atcattttgg
     3961 agtcataacc aagtcgtgtt aaaaacattt tcatttgggc aatggtcgta ttctgcgcct
     4021 cgtctaaaat gacaaaggca tgatcaagtg tacggccacg catataagcc agaggagcta
     4081 tttcaatgac gcctcggtcc attaaccttg ttgtatgctc tgtaccaaaa atgtcatata
     4141 acgcgtcgta cacagggcgt agataaggat ctactttttc ttttagatct ccaggcaaaa
     4201 aacctaaact ttcgccagct tcaacggcag gtcttgttaa aatgattttg ctcacatttc
     4261 cttttttcca tgcatctact gccataacta ctgctagata ggttttacca gtacctgctg
     4321 gaccaacgcc gaaaacgatg tcatgttttt taatcatttg aatataagtt ctttgtccga
     4381 atgtttttgg cctaattggc attccttttg cattcttcgt aatttcttct tcaaataagg
     4441 tatgaaagta aataagtgtt ccgtttcttt gcatttttac cgcttgagcg atatctcgac
     4501 catcaatatg aatacctcgt tttaccgtca aaataagttc atttaaaacg gcagtcgtat
     4561 gctgtacagg ctcttcctcg cctgtaatag atagtgactc tccccgagta atgattttca
     4621 cttgaagtaa ctcttctaaa agttcgatat tcttattatt attgccgaat aaatcttgaa
     4681 tatttgtgtc atcagataat tcgactactt cattaaattc atttagcatt ggctaacccc
     4741 ttcacctgtt ataagtgcct tgattagtta tattatacac gaaattgcct tgcttgaaaa
     4801 acgaagcgat agcaacaacg caattcaagt aaaaatcggc ataaaaaaac aggatttcct
     4861 ccacaaaata ggaagtaatc ctgtttctta atgtttcaaa actagtttga attagtttat
     4921 gaaagatatt tttttacgaa ttggttaaca gcaccaccgt cagctttacc ttttacttta
     4981 ggcataatcg cggacattac tttgccgaaa tcagctttac tagatgcgcc aacttcttcg
     5041 atagttgctt tcacaatatt ctcaagctct tcaggagtca attgttttgg cgcgtagtcc
     5101 tcaacaatga caatctcgga acggacttta tcagaaaggt cgttacgtcc agctttgtca
     5161 aactctgcta gagaatctct gcgttgtttg agttcgcggg aaatcacggt tacttcatca
     5221 tccggagtaa gatctttcac accttggtga attgcttcgt tttgtaaagc tgcttttaac
     5281 atacgaataa cggaaagttt ttctttctct ttatcgcgca tcgcttgttt catatcttca
     5341 tttaacttgt caagcagtgt caacgaaatc atcgcctttt aattagaatt tgcgttttct
     5401 tgctgcttcg gattttttct tacgttttac gcttggtttt tcataaaatt cgcgctttct
     5461 ggattcttgc aaagttccac ttttggaaac agtacgttta aagcgacgaa gagcatcttc
     5521 aagcgattcg tttttacgaa ctactgtttt tgacatctct ctttccctcc ctccggcact
     5581 tacatgcact cacttaaatc cttcatttaa gttccagaat aggacataac ggaaaataaa
     5641 ttatgaatta ttctgaagta atgcagataa gcattcactc attaaaaatt atatacgaaa
     5701 catcgggcat cgtcaacatg aaatcgttaa ctttcgcata aaactttgaa atgttattct
     5761 tttttgtttt tataaagatc aaaatagaaa gaagcagcgg ataaacaata gagtggtgcg
     5821 gtttctgttc ttaatattct cgggccgagt cctgcgagtt ttgcatttac ttcttgaagt
     5881 tgcattagct ctttttcgct aatgcctcct tcaggcccaa aaacacataa aacagactgt
     5941 ccaggcttca tggtttggaa taagttagca agcgcgctgt cctcaccttc tctggcgctc
     6001 tcttcatatg ctgcgataac aaagtcatag tgaacatggt caaacattaa ctctttgaaa
     6061 ctagcagcat aatgaacttc tggaatgatt gtccggtgcg attgttcagc agcttcttgc
     6121 gcaatttttt gaagtcgctc gatttttttg atgactttct tgtcatccca tttcaccaca
     6181 gatcgttctg ctttataagg gataaatttg tgtgcgccta gttctgtact tttttgaatg
     6241 atgagttcta gtttgtcgcc ttttggtaga ccacttgcga tggtgatttc tataggcaat
     6301 tcggtatctt cttctagcca tttcactaaa tttaaaaata cttcatcatc gtttatagct
     6361 gtaatagcgg caatacatgt ttttttgcta ggaaaaacaa tgaaaacttg gtcggattct
     6421 ttcattcgca taacacgagt aatatgatgg aagttttctc cagtaatgga tagtgtttcg
     6481 ttatcattct ctagctcatt tgttacaaaa taacgttgca tttattccac tcctcgtttg
     6541 gaaataatcg caacccagtc cccttgttgc tccatttttt caataacaag cccagccttt
     6601 ttaagtgctt cttcgactac tttcgctttg tcttcaataa tcccggaagc aatgaaaatt
     6661 ccgcctggtt tgagtgctct ataaacatcc tcagggaaaa gcaaaataac ttctgctaaa
     6721 atgttcgcaa caacaatatc cacgtctgtt ttattaatat cttgaagtag attattttgt
     6781 ttgacagtaa taatgtgttc agttttattt aaagtaatat tttcttctgc tgcacgagtg
     6841 gcgatttcgt cgaggtctgt tgctaaaata gattttgcac ctaatttagc actggcaata
     6901 cttaagacgc cagaaccagt cccaacatca atcacttcat ctcctggttg taaataatcg
     6961 ctcagtgcgc ggatacatag ctgagttgtc ggatgtgttc ctgtcccaaa agccattcct
     7021 ggatctagct caatgattat ttcgttagca gatggggtgt atgattccca acttggtaca
     7081 atcgtgatcc tgtcagtgat ttgaactgga tgataatact tcttccatgc ggtagcccac
     7141 tcctcgtcgt ccacatcatt aacgacaaat tggaaattac ctagcggaat atcaaaagta
     7201 gacagattct tcaatgtttg ttcaatttct ggaatttgct ctacaaattc tgttgtcttt
     7261 aagaagtaag ctttaataat aacgccgtct tctggataat cttctcgtct tagtgcatat
     7321 atttctccaa atttgtcttc tcgttcacgt aaaaaatcag caacatcttc aatggatact
     7381 cctgctgcac caaattctgt caaaacatta gctactggtt ctacagcttc gtttgttgta
     7441 tggacttcta cttctgacca ttccattttt aacactcctt ttgtatgtag aaaaggtcga
     7501 tggttgcttc tcgcacaact atcgacctct acgttcatca atcgccttta aaagctcgtt
     7561 tcattttgtc aaaaaatccg gatgtttgtt cgtctacttt gtctccagta gtggaagcaa
     7621 attctcgcaa gatttctttt tgtttatcat ctagtttttt cggaacaatg actttgacga
     7681 ttacatgttg atcgccagtt ccatttcctc gaagatgtgg cacaccttta ccacgtaagc
     7741 ggaaagttgt tcctgtttga gtaccacttg gaattttcaa acgaactttg ccgtgaacag
     7801 ttggaacatc aatttcgtca cctaatgtag cttgtacgaa tgtgattggg acttctacgt
     7861 aaatatcatc tgcttcgcgt tcgaaaaact catctggaat tacgacaaat accacatata
     7921 aatcgccgtt aggtccgccg ttaatgccgg cttctccttc accagatacg cgcatttgtt
     7981 gcccgtcgtt cacgccagct ggaactttca ctttgatttt tttcgtttta gttacacggc
     8041 ctttaccgtg acaagttggg catttttctt tgatttcttt accagtacca ttacagtatt
     8101 gacatgtccg cttgttaact acacgaccaa atggggtatt ttgttccacg ttaatggaac
     8161 ctttaccacc acaatggcta catttttcag gtgttgtccc tggttttgca ccggaaccat
     8221 gacatgtgtc acagttttcc tcgcgaggaa tttcgatttc tgcatcttta ccaaaaatag
     8281 cttctttgaa tttaagacgc atagtatatt gtaaatcgct accttgtctt ggggcatttg
     8341 gatcttgttg acgtccaccg ccaccaaaga atgtgtcaaa gatatcttca aatccagaga
     8401 atcctccacc gctaaatccg ccaccagcac cgccgccgaa gccttggttt ggatctacgt
     8461 gtccatattg atcatattgc gcacgttttt gtgggtcact taatgcttca tatgcctctg
     8521 atatttcttt aaatttttca tcagcgcctg cttctttatt tatgtccgga tgatactgtt
     8581 tggacagttt ccggtaagct ttttttattt cgtccgctga ggcgcttttg gaaacaccaa
     8641 gcacttcata gtaatctcgt tttgccatcc gccatcactc ctgtccatga tagattttta
     8701 tagtcctaac gtattgtaac atttgaaaga gatgttgtaa aaactttatt tcagataaaa
     8761 agtcaaagcc acagtagact ttgactcatt atctttactt taaaaaagat tatttgtttt
     8821 ctttgtcgtc gtcatttact tcttcaaatt cagcgtctac tacgtcgtca ttttgaggag
     8881 cctcttgacc ttctgcaccg ccagctgctt gttgttctgc tgcagcttgt tcgtataatt
     8941 taacagatag gttttgaacg atttcgttta agctttctgt tttttctttg atagcttcaa
     9001 aatcttcacc tttaagcgct tcttgtagtt catcgcgagc tgcttctgct tttttcactt
     9061 cttcttcttc cactttgcct tctaactctt tcaaagtttt atctacagtg aatactaatt
     9121 ggtctgcatt gttgcgaagt tcagcgtttt ctttgttctt tttatcttct tcagcgttag
     9181 cttcagcatc ttgaaccatt ttctcaattt cttcgtctgt taaacctgaa gaagatttga
     9241 taacgatgtt ttgttcttta ccagttccaa gatcttttgc acgaactgtt acgataccat
     9301 ttttgtcgat atcaaaagat acttcgattt gtggaattcc gcgtggagct ggtggaatat
     9361 ccgctaattg gaaacgacct aatgttttgt tgtcttttgc cattggacgt tcaccttgaa
     9421 gtacatggat atctacggct ggttggttgt cagctgctgt agagaaagtt tgtgatttag
     9481 atgttgggat agttgtatta cgttcgataa gtgtagtcat aacgccaccc attgtttcaa
     9541 taccaaggga taatggagtt acgtcaagta gtacaacgtc ttttacatca ccagtgatta
     9601 cgccaccttg aattgcagca cccattgcta caacttcatc tgggtttaca cctttatgag
     9661 gttctttgcc taattctttt ttgattgttt cttgaactgc aggaatacga gtagatccac
     9721 caactagaat tacttggtca atatcgcttg cagacaagtt tgcatctttt aatgcttgac
     9781 gagttggcgc aatagtacgt tcaactaagt catgtgttaa ttcatcaaat ttagcacgag
     9841 taagggttac ttctaagtga agtggaccag cttctccagc tgtgataaat ggtaaggaga
     9901 tttgtgtgct tgttacgcca gaaagatctt ttttcgcttt ttcagcagca tctttcaaac
     9961 gttgaagcgc cattttatct tggcttaagt caataccatt atcttttttg aattctgcta
    10021 ctaaatagtc gatgattttt ttatcgaagt catctccacc taattcgttg tcgccggcag
    10081 tagaatgtac ttcgaatacg ccgtcaccta attcaaggat agatacgtca aatgtaccac
    10141 caccaaggtc aaatactagg attgtttggt ctgtttctgt tttatccata ccgtaagcaa
    10201 gagctgctgc tgttggttcg ttaataatac gttccacttc aagaccagcg attttaccag
    10261 catcttttgt tgcttgacgt tgcgcatcgt tgaagtaagc tggaactgta ataacagctt
    10321 tatctacagt ttcaccaaga tagtcttctg cgtagctttt tagatattgt aaaatgattg
    10381 cactgatttc ttgtggtgag taatcttttc cttcgattgt ttctttatag ttagtaccca
    10441 tgtgacgttt aatagaacta attgtatttg ggtttgtaat agcagcacgt ttcgctactt
    10501 caccaacttg gcgttcgcca tttttgaaac caacgacaga aggtgttgta cgtgcgcctt
    10561 ctgggttagg gatgattttt gcttctccgc cttctaatac tgctactgca gagtttgttg
    10621 ttcctaagtc aattccgata attttgctca ttgttatttc ctcctgttat tcagtaatta
    10681 ttttttattg atttactttt accatagatg ggcgtataac ccggtcttta agtttataac
    10741 ctttttgaag ttccgcagtg atttcattgc ttcctgcatt ttcatcacta tcttgcatta
    10801 cggcttgatg gaagttcggg tcaaattgtt cgccgacagc tggaatgact tcaatacctt
    10861 ctttttcaaa agcaacaagg atttggttgt ataccatttc cattcctttt aaaatttgtt
    10921 tcacttcttc ctgatcagaa gtcgttgcaa gtgctttttc aaaactgtct agtgcgggaa
    10981 gtaaatcttg cgctaggctc tgcgaacgat atttctgact ggcatcacgg tctgcgatat
    11041 gtcttttctt cacattttcg aagtccgctt gcatgcgaag gtagcgattt tctacttcat
    11101 caagtttgtt ttcaagctct aaaatttttg cttgttcttc tgttaaagtg tcagccgcag
    11161 cctcttcttc aacagtttct tctgtttcat ctagaatgtt taattcttct tgttcgattt
    11221 catcagctag tctttctttt ttgttctttt tctcagacac tttagccacc tcctgaaaaa
    11281 acgtgtgctt tttcagcctt cctaattttg gttatcacga taaagtttgg ttaacacatc
    11341 ggttaaatct cggctcatca catcaacgag tcccatcatt ctgctatatt ccattcttgt
    11401 gggtcctagg agtacaatac cgccaacgcg ttcgccagca atattatatg ttgctgtaat
    11461 gatactacaa tcttccatta gactattatt gttttctcgg ccaattttca cttgaagacc
    11521 atcgggaata tccctaaaca attcatacac atcttgttct tcttccatca aatgaagcat
    11581 ctcacggact ttattaatgt catgaaattc cggttgattt aaaatattcg tttttccgcc
    11641 aaaatacact ttttgttgac ttgcttgagc aaaagaatcg gaaaacacat gcataaagct
    11701 ttcgtaattt ctaacatgct tcccaagtaa ttcctttact tccatgggta tttgtacttt
    11761 taaatcatca agcgaaagtc ctactaaccg ttcatttaga atgttgacca tacgttcaat
    11821 atcggagagc gttgtgcctt ctggtattgt caccaaatgg ttatcaacat gcccttgatc
    11881 ggtaattaat atgagcattg cttgaaaatt atttattggt acaaatctaa agccacttaa
    11941 atgatttttc gtcgcttcag gaccaagcaa aatggacgtg taattggtta aatcggataa
    12001 cattaatgct gaattttgga taagtccttc catttcgtag tagttctctg aaaagaagga
    12061 acgaatcatt tgcctgtcgg atttatctag ctttttgggc tggagtaaat aatcgacata
    12121 gaagcgatat cctttctctg atggaactcg tcccgatgag gaatgcgtct tttcaataaa
    12181 accgtattct tcgagaacgc ccatttcatt acggatagtc gcggaactat aaggcaaacc
    12241 tttttctttc agcaaattct ttgatccaac tggctgaata gtccaagtga aatgatcgat
    12301 gatggcacga aaaatcaaaa gttgtctttc tgttaacata gcaatcacct cttttagcac
    12361 tccataacgt caagtgctaa atacaagtat aaatttacca aacaattcca ccttagtcaa
    12421 ccgaaaacac tcgatttcag actaaagttg gattgtttgg tcaaaaaagg tcaaatagtg
    12481 cggttttaga gaaattcttg aaaaacatta tttcctaaaa atcttccact tcttgtaagt
    12541 gccacatttt cttcgttatt ttcgagccag ccttttgcgg ttgttttttg aatagcattc
    12601 gcaaatgttg catctaaatc ttggccgaat ttttgtttga aatgtttttt atctacgccg
    12661 tccacttttc taagccctaa aaacatttct tcttccattt tttcttttaa tgtaagctct
    12721 ttttgttgga atgttgggag tatatttttt tggagtggtt ccatgtattt tttgattggt
    12781 ccgaaattac tataacgtgt attgccaaca tagccatgtg ctccggcgcc aaatccgtag
    12841 taatgttcat tgctccaata agtgatattg tgtttactct gaaatccttc tttggcaaaa
    12901 ttactaattt catattgttt acgaccgtgc ttttccattt cgttgagaag taaatcgtac
    12961 atatttgcct cggcatcttg accaggtaag aaaagctttc ctttttgcat aaggttataa
    13021 aaaatcgttt ttggttcgat gattaatgaa taggcggagt aatgcggtaa atcaaggtca
    13081 agcgcttgtt ttaatgtatc ttggaaatct gcttctgttt gaccaggcaa gctaaagatt
    13141 aaatcaatgc ttacattttc aaatccgatt ttgcgcatat tttccacaga ttgataaaca
    13201 tcttttacag tatgaatgcg cccaattttt ttgagaagtt cattgttgaa gctttgaact
    13261 cccatactga tacgattaac gccatgatct tgcatggctt gtaatttaga tagcgaaaga
    13321 tctcctgggt tggcttcaaa ggaaaattcg atatcttttt ttagaggtag aatgttatgg
    13381 atggctgtgc aaagtctcgc aatttgcgct tcgttcaggg ttgtaggcgt tcccccacca
    13441 acaaatacag tgtcgactgg cgcaataggt ccttttgcag cagttaattc catttcttta
    13501 attagtaaat ctacgtattc gtcgaccggt tgtccttcta agaatacttt attaaaatcg
    13561 cagtaatagc aaatatgttc gcaaaacgga atatggatat ataccgcgga actttcctta
    13621 ctcgattggt tcgtatttat catttttatc aattccttgc acttaaaatt tgcttcgttg
    13681 tccattagtc agtttaacat attttccagt gctttggtgc aggattcgct tttaatctaa
    13741 taaaccatac tttgccaaac tatccactgc agcaagaacg gcttcttctt ttgtcgaaat
    13801 cggctgccat cctaaaagat ctctcgcttt tgaattgctt atttgccgat tcatattaat
    13861 catcaactcg ccttctttgg cgtgtttact aaatatagca gctgctctta tagcggcatt
    13921 tggcaatgtt tttttcggca ttttactcac tagttcagga cgctctcgtt gaagcaaatg
    13981 tgcgatatct gccatactaa tttctccgtc agctgaagca ataaaacgtt ctccgtttgc
    14041 ttcaggagta atcattgcgc gaatatgtaa atcggcaaca tctcgtgcat ctactacgtt
    14101 taacggaata tttatgatac gtttcataga accatttaac agatttttta ataagtcaaa
    14161 gcttccggag acatgactgc tttgtgatgg accaaaaatg gcaaccggat tgatggtagc
    14221 aaattccaat tctgtttcat tttccatgaa tttccaagct tctttttctg caattagttt
    14281 agatttttca tatgctgaca aacccttagc gagttcatcg gtccaatatg cttctgttgt
    14341 aatgctattt ttatctgcgt tgctaaaacc aatagcgcca aaattcgaag tcataactac
    14401 tcgttttact tttgcctctt ttgcggcctg taaaattctt gtaatacctt ctattgctgg
    14461 gcgtattaat tcttcttcat ttttaaattt accgaaaaat actggagatg cgacacttag
    14521 cacatattta caatcgagca ttgcttcttt ccatccttca tctttggata aatcaagttc
    14581 gacaaaggat aattgcgtaa aatccgttat tccattattt tgcagtactt ctattacttt
    14641 ttctttgctt tttaaagagc gtacggttgt tttgacttga tagccttgtt gcaataattg
    14701 aaagataata tgcattccta aaaatccagt tccgcctgtt actaatacgt tatttttcat
    14761 cgtgaattcc tccaatagta gttaattttg cttattttct ttattaactt tatacttact
    14821 ttaaacccta gagtatagtg tagggcaagt aaattattta ttggaggaag aaatgactta
    14881 ttctattaaa gaagtgtcca aaatatttaa tttgtcgatt tatacattgc gttactatga
    14941 taagcaaggt ttattgccgt ttgtttctaa aaaccaatcc ggctaccgtg agtttacgga
    15001 atcagactta aatttaattc atacgatttg ttgcttgaaa aatacaggaa tgccactaaa
    15061 gcaaatccgc acatatattg attattgtat ggaaggcccc gtttctattg aagcgcgtaa
    15121 acagttgctc ttggatcatc gggccgccgt tttaaaaagt ttagaagatt taacagaaaa
    15181 tctaaaagaa gtcgatgtta aaatagcgaa gtattcgtct cctgatgcgg tagaaatcat
    15241 tactgccgag agaaattatg tcagtatgga aaagaaaaag catgatttga tttatccgta
    15301 taatatataa aaaagttgtg ctgtgaacat ttctgttcac agcacaactt ttttattatt
    15361 tggattcgtc cattttcaag attgccataa atgcttcttg cgggacttca actgaaccga
    15421 tttgtttcat tcgtttttta ccttcttttt gtttctctaa aagttttcgt ttacgagata
    15481 cgtccccacc gtaacattta gcaagtacgt tttttcgcaa cgctttaata gtagaacgag
    15541 aaacaatttt tgtggcaatt gctgcttgaa taggtacttc aaattgttgt cttggaataa
    15601 gttcttttaa tttctccacg atgatttttc cacgctcata agcaaaatca cggtgaacga
    15661 taaagctaag tgcatcaact ttttctgcat ttaaaagaat atccattttc acaagtttag
    15721 aagctttata gccaattaat tcataatcaa aggacgcata accttttgta gatgatttta
    15781 attggtcaaa aaagtcatat acgatttcgg ataatggaat ttcgtacaca atacttacgc
    15841 gaatatcatc taagtactcc atcgtaatga agtttccacg tttgttttgt gccagttcca
    15901 tcactgcacc aacataatca tttggaacca tcacagttgc ttttacatat ggctcttcca
    15961 cgctttcaat aacaccaggt tctggcattt cagcaggatt atcaaccaca atgttagaac
    16021 catctgtcaa gttgacatga tagataacac ttggagcagt ggtaattaaa tcaatgttaa
    16081 attcacgttc gattcgctct tgaataattt ccatatgtag taatcctaag aaaccacaac
    16141 ggaaaccaaa acctaatgct tgagaagttt ccgcttcaaa ttgcaaagca gagtcattta
    16201 attctagttt ttctaaagca tcacgaagat cattatattt agaggagtcg attggatata
    16261 gaccacaata aaccattgga tttaatttac ggtaaccatc cagcgcttct tcagctggat
    16321 tattcgcaag tgtgattgta tcacctacgc gcgtatctcc aacatttttt atagctgctg
    16381 ttaagtaacc aacgtcacca acaagtaatt cgtcacgtgg tgttgccttt ggtgagaata
    16441 caccaacctc cgttacttcg aattctttgc cattggacat cattttaatt cggtcgcctg
    16501 cttttacaac accatccatg atacggatat tagcaataac accacgatat gcatcaaaaa
    16561 cagagtcaaa aatgagcgct tttagtggtt tatttacatc accagatggc tcaggaactt
    16621 tttcgacaat ttgttctaga atgtcttcaa taccaatacc agatttcgca gaagcaagta
    16681 cagcgtcaga agcatctaaa ccaattacat cttcaatttc ttcgcggact ctttccggat
    16741 cggccgctgg taaatcgatt ttgttaatga ctggtaaaat ttctaaatcg ttgtctagtg
    16801 ctaaataaac attagcaagg gtttgtgctt caattccttg cgcagcatct acaacaagga
    16861 ttgctccctc acatgcagct aaacttcttg atacttcata ggtgaaatcg acatgcccag
    16921 gcgtatcaat cagatggaag atatatgttt ctccatcttt tgctttatat tttaattgta
    16981 cagcatttaa ttttatggtt atcccgcgtt cacgttctaa atccatcgaa tctagtagct
    17041 gatttttcat ttcacgatgc gtcaaagcac ccgtttgttc taaaatccga tcagcgagtg
    17101 tagatttacc atgatctatg tgcgcgataa tcgaaaagtt tctaattttc ttttgtcttg
    17161 cattcatttc ttctttgttc atttccccag ctcctgatta gaactcatcg cataaatccg
    17221 atggcaagct atccttgatt atatcagtag aacgcttaac attcaatgac ttctttatta
    17281 attacgtata aatttaaaat aaaatagaaa gtattattgc aatatggctg tgatttcggt
    17341 ataatagcat ttgttctgat ataatttaaa aaggtatgtt atatgaaata aatactacct
    17401 cattagtttg gacggaggtg aatggaatgc caaatattaa atctgcaatt aaacgtgtaa
    17461 aaactgctga aactcgcaac agccgtaatg catctcaacg ttctgcaatg cgtactgcta
    17521 tcaaaaaatt tgacgaagca gctgcaaaca acgcggacaa cgcgaaagat ctttacgtag
    17581 aagcatcgaa aaaattagat agcgctgtga gcaaaggatt gattcacaaa aacaatgctg
    17641 ctcgcaacaa atctcgctta gctgctaaat tagctaaata ataccgagtt cggtataaaa
    17701 catcacacct tgtgtggtgt tttttgtttg caaaaatagc tttgtcttaa atgacaaagc
    17761 tattttttat actctctttt gccgattatc ttgtaattcg aataagaacc attcgagttt
    17821 ctgttcttta tcaccaaagc cagttttcat ttccaagtcg atttcagcta atcgttttaa
    17881 agcttgattt aattgtaatt ccgtgaaatt cttcgcttgt tttgatgcta acttaacgcg
    17941 gaatggatgc acttttagtt tagtcgcagc ttgttgttgc gaataacctt gttgttctaa
    18001 tagctttaat tggtttaaca acctgaattg actagaaatt aatgccagta tcttgatagg
    18061 ctcttctttt tgttttaata agtcgtaata aatccgaagt gccccgctga tatccatagc
    18121 aatcatctta tcaagtaaca aaaagatatt ttgttcaagt gaacgtacaa ctaaagattc
    18181 tacatcctga atggtaattt cttttgaatc aaaacaatag agcattaatt tttgcagttc
    18241 attcatggca gttgttagct gaccactagt taattccacc agtcgagtaa tagcctcttg
    18301 tgacatttgc atgttgttct cgcttaattt tgcttcaatc cattttttca actcattctc
    18361 attaggtcgt tttgcctcta taacagtagc tgttttcttg agtaacttag taagcttttt
    18421 acgctcatct aacttttcta cgcgcgctac aaagcataat acggaataat ccactggttc
    18481 attgagataa gcctctaatt ttgcagtatc atgctccact ttgtttttac ttttttcagt
    18541 tgttaaaaaa agcggattat tggccattac taaacgttta tcaccgaaaa aaggcatgct
    18601 ttctgcttct tgaatgacca cttctattgg catttcttct aaatctaaat tagcgtagtt
    18661 aaattctact tcttcgcctt ccaaaatgtt atctattaaa agttgcttcg tttcgttaat
    18721 aatataatct tccgtaccaa tgattaaata caccggcatt atttttttgg agcgtatctg
    18781 tttccattct ggcagcattc atttcgcctc gcttcactct tatttctctt tctatggtaa
    18841 aacatgaaat aagagatagc aagttttatt tcaaagtcgc ttcaaagcct tttccaaatg
    18901 tataagttat ttccccttgt acatctgttc gtaaaattgt tactcctgcc ttttctagcg
    18961 tattaatagt ttctgcgtgt ggatgaccaa agcgattgtt taacccgcat gaaataactg
    19021 caaaagtcgg cttcactttt tgaataaatt ctttggaact ggaggtcttg ctaccatgat
    19081 gccctacttt caaaatatct gctttgatag gctgttctga tatgcccttt tctccgttcg
    19141 cctctaaatc accagtaaaa agccatattt taccatctaa tactgccttt aatacaatag
    19201 agtcatcatt tcctccttct cctgctttat cgggatataa gcattcgaaa ctgttttcgc
    19261 caatttgcca cttggcaccg gccaaaataa ttgtctgttt cacttttggc atcgcagcga
    19321 gagcttcttt catgatgggt ttgttttctg ctcctttagc aaaaataagc tctttaatag
    19381 taatgttttt ctgtaaatca tcaagtcctt ccatgtggtc agcatcgcta tgtgtaataa
    19441 ttactttatc taagctatta attccttttg attttaacac tgggctaagt gtacttccgc
    19501 ctattgtaaa tggttttctt ttcttagccc atgcttcttt ttcaaatgga agttggcctc
    19561 cagtatctat taaataattc ccttgattgt atggtagttg aattaaaatg ctatcccctt
    19621 gccccacatc gataaaacta acttttccac taaaattaaa actagctaaa taacataata
    19681 aacaaaaaca aatgaatatc cctaaaggaa actttttctt ttgccactgg ctgaagacga
    19741 tgatgatagt tataatggtt agcactaata taacggtgtt tggcctccct gttacaatag
    19801 tctgatgcgg aatcttggcg aaaatgtagg ttaatttttc taccaattgt ataaagaatg
    19861 taagcattgc ttcaggaaaa tgaaatattt ctgttgaaaa aaaagacagc acaaacacag
    19921 ttagacaacc tggcaaaata atcatcgtaa aaatgggcac ataaattaaa ttaaagaata
    19981 tccctaccca tgaaaatgag taaaaatgat acatcatgac agctgaagac atgatggttg
    20041 aaatgaagga aatagcaagt gacttagtaa atgcgttctg ctgtctggtt agtatttgtc
    20101 ttgacgataa aataattcca aacgatactg cataagatag ttgaaaacct acttctctaa
    20161 tgatatacgg ttgcaagagg aaaaacagaa taaaggacaa acaaatggca gaaaacgaac
    20221 tccatttagt agtatatttt tctgacaata aaagtaatgc tgtcattgta gcagctcgta
    20281 tgactggcgg atttgctcct gtaaggataa cgtaaaatgg taagaaaaca agtagacaag
    20341 tgatggctct atcccttgta ataccgaatt ttagtaggag aaaatatatt gcccctatta
    20401 ataaattcac gtgaagtcca gagatagcta gcaaatggac aacacccatt tgttgataaa
    20461 cttcatacat ttcgggggaa aagccgtttt tctctccact aattaatgcg agacaataag
    20521 gagaaatggt tggagatatt ttttcggtta aatgggtaat tattttcaaa cgtatatttt
    20581 gaagtttcat taggaaagat ggtgagaatt gactggaaat agcaagatta cttgctcgaa
    20641 gtatatagtg tacattttgg ttctttaaat aagtttggta attgaattga ttttgattgc
    20701 ggttgacgga aggtgtttct atatttgcag aaacagaaat aaactgtccg taatggagct
    20761 tttttagttt ttgttgttcc tcttccgttg taattttata actcaattga aatttttctt
    20821 tttcgcagcg tacaaaagtt tgaaaactat ctccatcgat ttttaaatta tctataattt
    20881 gacagttccc attatattca gttgctgtaa aagaggaagt attgaatttt tctattacaa
    20941 acaaaaaact ataggttaga aaataaatga ggacaaaaag aagaa
//
LOCUS       DASDYO010000040        20710 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.040, whole genome shotgun sequence.
ACCESSION   DASDYO010000040 DASDYO010000000
VERSION     DASDYO010000040.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 20710)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20710)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20710
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.040"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..467
                     /locus_tag="U0290_001256"
     CDS             <1..467
                     /locus_tag="U0290_001256"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="GHKL domain-containing protein"
                     /protein_id="HEM2301301.1"
                     /translation="IESNNYKISLLQNIHVIELKGLLAVKLIRAQELKIDAILEVVEP
                     IDKISMDSIDLCKVVGILLDNAVEAALTCENPVIRIAFVKKGDSIIIVFANSLPVNMP
                     PIYKIFEEGFSTKGEGRGLGLASLREIMKKYSHVALDTKVTDREVIQELEIM"
     gene            486..1214
                     /locus_tag="U0290_001257"
     CDS             486..1214
                     /locus_tag="U0290_001257"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2301302.1"
                     /translation="MLPVFICEDNRMQRERLTKYIEDYIMVEHFDMKLELSTGDPFEL
                     VSRMPTHQGMGLYFLDIDLGQPDMNGFELAQEIRKFDPRGFIIFITTHAELSYMTFTY
                     KVEALDYIIKDDIDLLHDRVLACMKQAEERISNDQDMQKYFTFKVSDKKIIHELLDDI
                     LFFETAPTIHKVILHGKNRQVEFYGKLKNIEKMLDESFYRCHRSYIVNKKNIHELDTT
                     KGVVKMSNGENCYASSKLIKSLSL"
     gene            1381..3354
                     /gene="pdeA"
                     /locus_tag="U0290_001258"
     CDS             1381..3354
                     /gene="pdeA"
                     /locus_tag="U0290_001258"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic-di-AMP phosphodiesterase PdeA"
                     /protein_id="HEM2301303.1"
                     /translation="MSGYFQKRMLKYPLYGLIAATIILSVITFFFSWWLSALVVVGGI
                     ILTVAMFYFEYRLNEDVQLYVSNLTYRIKRSEEEALVEMPMGILLYDEHYKIEWVNPF
                     MSKYFDKAELIGESLEEVGPEFLDVITGNDEKGIMSIAWRDHRFDTIVKRKERILYLY
                     DRTEYYDLNKKFQANKSVFAVIFLDNYDEWAQGMDDRRRSALNNLVTSMLTNWAREHR
                     IYLKRISTDRFMAFLTEEMLKRLEEEKFQILDRIRERTSKQNIPLTLSIGIGYKEDDL
                     IQLADLAQSSLDLALGRGGDQVVIKQPEGKVRFYGGKTNPMEKRTRVRARVISQALQE
                     LITQSDQVFVMGHRYPDMDVIGSSLGVMRIAEMNDRNAYVVVEPGKMSPDVKRLMNEI
                     EEYPNVIKNIVTPQVALENITEKSLLVVVDTHKPSMVINKELLDSATNVVVVDHHRRS
                     EEFVGSPVLVYIEPYASSTAELITELFEYQPDLEQVGKIEATALLSGIVVDTKNFTLR
                     TGSRTFDAASYLRSLGADTILVQQFLKEDITTFTQRSRLVESLEIYHDGMAIATGHED
                     EEFGTVIAAQAADTMLSMEGVQASFVITLRPDKLIGISARSLGQINVQVIMEKLGGGG
                     HLSNAATQLKDVTIAEAEKQLISAIDAYWKGET"
     gene            3357..3803
                     /gene="rplI"
                     /locus_tag="U0290_001259"
     CDS             3357..3803
                     /gene="rplI"
                     /locus_tag="U0290_001259"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L9"
                     /protein_id="HEM2301304.1"
                     /translation="MKVIFLKDVKGKGKKGETKNVADGYANNFLIKNGYAVEANNAAL
                     STLSAQKKKEDKLAAEELAEAKALKEKMENLTVELKAKSGEGGRLFGSITSKQIAQTL
                     EKTHGIKIDKRKMDLPEAIRALGHTKVPVKLHHEVTATLDVHVSEE"
     gene            3828..5180
                     /gene="dnaB"
                     /locus_tag="U0290_001260"
     CDS             3828..5180
                     /gene="dnaB"
                     /locus_tag="U0290_001260"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replicative DNA helicase"
                     /protein_id="HEM2301305.1"
                     /translation="MDNNFQDRTPPQNIEAEQAVLGAIFLEPNALITASEILMPDDFY
                     RTGHQIIFETMLDLNDHGKAVDVLTVYEALAAKGNLEDAGGLPYLTELSGAVPTAANL
                     EYYAHIIEDKALLRRLIRTATQIATDGYSREDELDMLMDEAEKSILEVSQRKNVGAFK
                     NIKDVLVKTYDDIEILHNRKGDITGIPTGFNELDKMTAGFQRNDLIIVAARPSVGKTA
                     FALNIAQNVATKTDENVAIFSLEMGAEQLVMRMLCAEGNINAQNLRTGALTSDDWQKL
                     TIAMGTLSNSGIYIDDTPGVRVNEIRSKCRRLKQETGLGMIVIDYLQLIAGSGRGGEN
                     RQQEVSEISRSLKALARELEVPVIALSQLSRSVEQRQDKRPMMSDIRESGSIEQDADI
                     VAFLYREDYYDREGENDGTIEIIIAKQRNGPVGDVKLAFVKEYNKFVNLEVRYDDAMA
                     "
     gene            5438..6730
                     /locus_tag="U0290_001261"
     CDS             5438..6730
                     /locus_tag="U0290_001261"
                     /EC_number="6.3.4.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenylosuccinate synthase"
                     /protein_id="HEM2301306.1"
                     /translation="MSSVVVVGTQWGDEGKGKITDFLSENAEAIARYQGGNNAGHTIK
                     FDGVTYKLHLIPSGIFYKEKISVIGNGMVVDPKALVEELKYLHDKGVDTSNLRISNRA
                     HIILPYHIRIDEADEERKGANKIGTTKKGIGPAYMDKAARVGIRIIDLLDKETFKEKL
                     EHNLGEKNRLLERFYELEGFKLEDILEEYYDYGQQFKEYVCDTSVVLNDALDDGKRVL
                     FEGAQGVMLDIDQGTYPFVTSSNPIAGGVTIGSGVGPSKINHVVGVAKAYTTRVGDGP
                     FPTELFDTIGDTIREVGHEYGTTTGRPRRVGWFDSVVVRHARRVSGLTDLSLTLLDVL
                     TGIETLKICVAYKLDGKTITEFPASLKDLARCEPVYEELPGWTEDITGVTSLDDLPVN
                     CRHYMERIAQLTGVQVSMFSVGPDRAQTHVIKSVWRLA"
     gene            7033..7326
                     /locus_tag="U0290_001262"
     CDS             7033..7326
                     /locus_tag="U0290_001262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WXG100 family type VII secretion target"
                     /protein_id="HEM2301307.1"
                     /translation="MSGQIRMSPSELRDRAKTYGQSGRDIEDILSRLSQLQEQLRSEW
                     EGQAFMRFDDQFEQLKPKVTEFANLMDQINDQLEKTANAVEEHDQQLSQNFGF"
     gene            7475..10681
                     /gene="esaA"
                     /locus_tag="U0290_001263"
     CDS             7475..10681
                     /gene="esaA"
                     /locus_tag="U0290_001263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EsaA"
                     /protein_id="HEM2301308.1"
                     /translation="MKKVKWSILLFLVLAIFLSAGITYLALNQSSNKESKNNSEKTHK
                     MTIALVNEDQGDNFQGKQVEFGNQFVKSIEKDDTHEWYVVSRGVAESGLKRDVYNMMI
                     VIPSDFSEKAMSMTSSAPEKVTISYKVNDVGNSDLKAEAEKTAASVLEDFNSRIIDVY
                     FASILTTLQEAQDNIGTLVKEEKKYDAIYNKDVNNPLSSYTKQFKTVQDYTGTSKESF
                     QGFQDIMKEFEESLNLSQKENEEHMKNMDAFTKTQEENAPFGAEFTENLSKFDGTLSA
                     EDIRMQTAALEQANAKMTSEFQILEDSNSLLSQTQALQSYIAETNARIDAVDAEIMGT
                     LENHFRTAVYNDLLRILRENEYSDKLNEIGLKDLTGEDINAGFNKMIVKEIQSLPTYN
                     ADQLASIGLDEEMYKNVVTLSKEYYSNHRSAFGEGFSFTTDPKTLPTDTLKSDTINRL
                     KSEGVTLESSSYTVEGSDYPTEIILTLDENFTFSDVDCLVNGSSNPELVQQTAYGENG
                     IKLSIQALGSTPAEIKITGKAKLREGVNVPLIGAVNWNATLQQYEKKEYSEMPTIPSE
                     LDPTTPDTSLIVRKEPVPIKVTAPTYLNETKSSVKAITNTVKDYYKLQALFDLYYGID
                     ASDSGQIPDFSNYQVTLENSAKASSYYYIFNKEDVIGSFVNLTTDRFVADYTKKIKAF
                     EKRIDDYKNTMAEANSRSEDVTNRLNETTQEAINLNTNLALTLQNLESWREASKGLIE
                     ENGVVLEKSGEEATMALQLSSEFAGLLAESESLAGTSEGNLKSAEVVYKTFEAIDKEA
                     KNIQQSGETLVKEASTLSDDLSEKLEDDETFQKNFAKVMENSRVGDRQNENLYSFLSS
                     PVDKMNAGTIVAGDKSMPYFMILICTILAIFTSYVISHQEKKREQLNEFEKEMSLVFK
                     NIPITFLAICVGIIEGLIIGAISGFIFEVGEIGMFLWIGVCVLIMMTLVTAFSYLLRQ
                     FNMIGMSIILLVLSLYLFLTDAVGLNIDNESIFATFRTFSPLQYMEYLLNGILSAQKD
                     YIIVVYSLIGAALLFTGLNLFVWHRSKEEVEEDDSDEI"
     gene            10671..11186
                     /gene="essA"
                     /locus_tag="U0290_001264"
     CDS             10671..11186
                     /gene="essA"
                     /locus_tag="U0290_001264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssA"
                     /protein_id="HEM2301309.1"
                     /translation="MKFKIAALLMLLCFAFAPGVLAADSDSYLENNGKMDIKTDRLQK
                     TEEEKTKELEQMEETELDKNGIPLFTDEMDEKIAKEKAAEKAEYDRIKDSLFEEESTS
                     GETVKKTKEKLFTDEYETTAVNTETPTTTETTVEDETKKTKQKTVGGAIAGTLVALAG
                     GIYVAARNVFE"
     gene            11204..11455
                     /locus_tag="U0290_001265"
     CDS             11204..11455
                     /locus_tag="U0290_001265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EsaB/YukD family protein"
                     /protein_id="HEM2301310.1"
                     /translation="MAKNTHMNVTVDFTNWGASKYDLRIPVHQPIKALIINLAETLKI
                     DYKDLSKCTIKTTNKAILLSDDDKLTNFQIADGDILEIL"
     gene            11477..12673
                     /gene="essB"
                     /locus_tag="U0290_001266"
     CDS             11477..12673
                     /gene="essB"
                     /locus_tag="U0290_001266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463593.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssB"
                     /protein_id="HEM2301311.1"
                     /translation="MNKTIEMDGTTYDFTYEDLVWSITFPKSKTRAKELAQLELLEKP
                     ATHFTPAKISSDSDSYTISYEIAKRTYGFEQVRKMGREDKLRALRNIADLGELLNTRY
                     TFFLHPDNLIFDINLVPSIVHRGIKNILPPYELTEETFFKQYQCFVIAMFSKKFSFEN
                     LYNGSLSGARGTQFEKSILDAKTVQDIATILEEAYVKEHAAVQKNMASVPKKKYSTFR
                     GLAVGFIIVAILLAIPVSYFAFVKVPLQNDLLTANENFLKTDYDKVITGLENVDPEKM
                     PQSVQYELAYSYVKGEKMSDKKKENIMNTISLKSDAKNLLYWIYNGRGEFSKSLDIAK
                     LLDDPTLAMYSLTKQIEQVQSDTTLSGDEKVEKLKTLEESLKEYDEKVNESTTTEDET
                     TNTEAK"
     gene            12687..17183
                     /gene="essC"
                     /locus_tag="U0290_001267"
     CDS             12687..17183
                     /gene="essC"
                     /locus_tag="U0290_001267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type VII secretion protein EssC"
                     /protein_id="HEM2301312.1"
                     /translation="MNREALLIVSNGQQCHKNHLSPEKVVTIGNTIEHEITYPELAES
                     IEVKYDEGSWNAGTTALQANQAVNVENLAFYLCQDLHTQVYDVVTNISVTFGVGIEND
                     VTLDDTKSDFILLRDAKEKLFKLQVLNGEVYHNFSLVTEDCVLEPGDQLYTDGVTITI
                     GKEDISVLAVKNRVTSKLAPLFAADNSFGEDYPDYHRSPRIIYRAPEEKISMAKPSSK
                     PSKPTDGLIKIILPPLIMVAITVMISIFQPRGLYIIMTIAMSAVTITMAILNYIKSRK
                     KYKIDSKQRVESYDLYLKRKTKELHETSEKQRHALTYHYPDVTELEKMALRVDSRIYE
                     KTMFHHDFLTFRVGRGDEASSFSVEFQQEEFSQEKDELVEEAVKIKGQYLSINEVPVA
                     TDLMHGPVGYIGPRRLVLEQLQMLVMQTSLFHSYYDLQFITIFPEEEKADWDWMRWLP
                     HANMRDVNVRGFVYHERSRDQVLNSLYQILKERKQALTEQASKQEKLYFTPHYVVLIT
                     DEKLVLDHTVMEFFNEDPSELGVSLVFVQDVMESLPEHVKTVVDIRDAKSGNIILEQG
                     DLVNRAFVPDHLPADFDKEVISRALAPLNHLQNLKNSIPESVTFLEMYGVERVEELNI
                     AGRWAKNETYKSLAVPLGLRGKDDIVQLNLHEKAHGPHGLVAGTTGSGKSEIIQSYII
                     SLGVNFHPYEVAFLLIDYKGGGMANLFKNMPHLLGTITNLDGAQSMRALASIKAELQK
                     RQRLFGEHDVNHINQYQKLYKQGKATEPMPHLFLISDEFAELKSEQPEFMKELVSTAR
                     IGRSLGIHLILATQKPSGVVDDQIWSNSKFKLALKVQNASDSNEILKTPDAAEITLPG
                     RSYLQVGNNEIYELFQSAWSGADYVPDKESTDYIDTTIYAINDLGQYDILTEDLSGLD
                     KKDDLTKLPSELDAVIDHIHAYTEASGIKALPRPWLPPLPERIFAQDLHPVNFEEAWK
                     EPKKPLQATIGLLDQPELQAQVPLTLDLTKDGHVAVFSSPGFGKSTFLQSLVMDLARQ
                     HNPEQLHVYLLDFGTNGLLPLVDLPHIADTMMVDEVEKIQKFLRICLNEIKTRKKLLS
                     QYRVANIEQYERASGKELPNIIVVLDNYDAVKDAGLGDDFEKIITQITREGASIGMFM
                     IISASRHMSLRTQMATNIKQMIALYLIDKNDISSTVGRTDTPLEEYPGRALVKLETVT
                     TFQTTLPSHGEETIQQIEGIRNEAKLMREGWQGELPESVPMIPEKIKLADFCEWMETK
                     EVVANGNIPIGVDFEYVKPVGIDYKQTGVLIIADVIGRNLVSINKNVANSLVQNPNIS
                     LLISDTANFDLVEMSTKANLYSNNTEDLKQNMKKVLSIYQSRTEKADELRKAGDNLGV
                     TAMIQGLKDIVAFVGDYDILLKTLDEEDQKVLIDMINNGKTYGCYLILSGSIQAFKGY
                     GDLNKAVQAQRNYIFFDRLSNSSPFSFSFNIYREQELLPEEGYVIAGQEWQKIKIAKY
                     EEEV"
     gene            17189..17506
                     /locus_tag="U0290_001268"
     CDS             17189..17506
                     /locus_tag="U0290_001268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4176 domain-containing protein"
                     /protein_id="HEM2301313.1"
                     /translation="MLTKEILPIGSVVYLKESLKKVMITSRLITIQGDEEKEFYDYGG
                     VVYPEGTKDDNILAFDAEDITDVKFRGFVDDDEVVLVKRMREWQKEEFGVSPEEEDEM
                     LEL"
     gene            17496..17930
                     /locus_tag="U0290_001269"
     CDS             17496..17930
                     /locus_tag="U0290_001269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301314.1"
                     /translation="MNYDERVRVLIELKVDLSGKLEMMENEEALLCRQKHDFASAWSN
                     AKTEDAYRKLNEAVRKKIKETTEYAREIDEKITARIKRIEAAYKAEYQSNRSYTWRIA
                     EIDPIKFKEKYNERLNQLSYLSCDGSVKTRLIKEFRQNNFLK"
     gene            17942..18250
                     /locus_tag="U0290_001270"
     CDS             17942..18250
                     /locus_tag="U0290_001270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301315.1"
                     /translation="MVSPMPDKTVKMDKGSINPKLDKLISSLDNFDNINKKMGTIVGS
                     QEISGEAADALSESLLVLVSYGEQYSLVIRNLKEVIVDYCKSVEEIDKTAANAVSKGV
                     "
     gene            18269..18910
                     /locus_tag="U0290_001271"
     CDS             18269..18910
                     /locus_tag="U0290_001271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301316.1"
                     /translation="MKSRNWLKGLGVTMIVVTLILTGCGNGDAEKTDTKEQTKSVEEE
                     GKEVKIESNEGKPQHEQLITVKLPPEAEYLNDETLEVYEQDKKKYDQTEQLITNNSVT
                     ILLGDFCYYEPAWSSLTCSAILVNGTDTNIEDLSFKAEIMNKPMSGKIFSDDKVPELT
                     KAKTGKFQPNEGIPIILVFSEENPKNEENAEPQKINIKDIKVKIKDIQYKAVK"
     gene            18922..19236
                     /locus_tag="U0290_001272"
     CDS             18922..19236
                     /locus_tag="U0290_001272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin B"
                     /protein_id="HEM2301317.1"
                     /translation="MAKEIKVNPDFLKKVESNVTNYIDAQKEVSVELLAVRTNLASNF
                     SGIACDEIKNYITELMNDLEKEFGVFITRNHEKVKALGESYKELDGQLGQTFNYGMER
                     TK"
     gene            19233..20195
                     /locus_tag="U0290_001273"
     CDS             19233..20195
                     /locus_tag="U0290_001273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301318.1"
                     /translation="MSGKIKFNIAEAQNISLELKIAAGRYTQETEELLKVLKNNSLCD
                     KDQDVVEQRGRIEKNNQRLIEYEKFVNTNLAKSNSVIEELFMSVEVLYAQQVSEFRNP
                     NSAGYKELMGNVKAISYQKISQISGLGEMLTSKGSVGAIKDIRDTLLGTLVDDTYLKL
                     IDDTVEYQGENKNITDLYGDKISKVGSRRKKLDTPTKYLSTAYLISDTLKSFNSYGNS
                     KDSSRLAGDLTGIAITKGADFAVGKLATTALSGFGVSGVKGAIAGAIISVAADKIIDP
                     TVEYVKESKVEAKRDDWETKGIYKGWKKIRDLKLEYTMGNYQAS"
     gene            20299..20634
                     /locus_tag="U0290_001274"
     CDS             20299..20634
                     /locus_tag="U0290_001274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301319.1"
                     /translation="MYINLKSSDGNVITTKVGSCWTCVFLSFFGPLLRGDIKFFVLYV
                     ILDGAGLFITLNYDRDIGIAIMAMVTLLFESNYNTWFIRGKMNNGWEPETEKDREILL
                     EKGVIKTEV"
BASE COUNT         7220 a         3165 c         4580 g         5745 t
ORIGIN      
        1 caattgaatc taacaactat aagatttctt tgcttcaaaa tattcatgtg attgaactaa
       61 agggtttgct agctgttaaa ttaatacgag ctcaagagtt gaaaattgat gcaattttag
      121 aagtagttga accgattgat aagatttcga tggatagcat agatttgtgt aaagttgtcg
      181 ggattttgct agataatgcg gttgaagcag cgctaacttg tgaaaatcca gttattcgaa
      241 tcgcttttgt gaaaaaaggt gatagtataa ttattgtatt tgcgaatagt ttaccagtaa
      301 atatgccacc gatttataaa atatttgaag aaggtttctc tacaaaagga gagggtcgtg
      361 gattaggcct tgctagtttg cgggaaatta tgaagaaata ttcgcacgtt gccttagata
      421 cgaaagtgac cgatagagaa gttattcaag aattagaaat tatgtagaag aatggggatg
      481 aatttatgct accggttttt atttgtgaag ataacagaat gcagcgagaa aggttaacga
      541 aatatattga agactatatt atggttgaac attttgatat gaagttagaa ctttcaacag
      601 gagatccgtt tgagttagta tcacgaatgc ctacacatca aggtatgggg ctttattttt
      661 tagatattga tttagggcag ccggacatga atggttttga attagctcag gaaattcgga
      721 agtttgatcc gcgtggtttc attattttta ttacaacaca tgcggagtta agttatatga
      781 ctttcacgta taaggtggaa gcgcttgatt acattattaa agacgatatt gatttgctgc
      841 atgaccgggt acttgcctgt atgaagcaag cagaagaacg gatttccaat gatcaagata
      901 tgcagaagta ttttacgttt aaagtgtcgg ataagaagat tattcatgaa cttttagacg
      961 atatcttatt ttttgaaaca gccccaacta ttcataaagt aattttacat ggcaaaaatc
     1021 gccaagtgga attttatggt aagttgaaga atatcgagaa aatgttggac gaatcatttt
     1081 atcggtgcca caggtcgtat attgtgaata agaaaaatat tcatgagctg gatacgacaa
     1141 aaggtgtggt gaagatgtct aacggtgaaa attgttacgc atcatcgaaa ttaattaaaa
     1201 gcttgagttt ataaaagtgg ccttaaaggt cgcttttttt gtacagtggc aagtttggat
     1261 ttgatgaaat gggtaaatat aggtaaaata atagtgatga attgttagtt aagtttatgt
     1321 tatgatatag atactcaaat tcagacaaaa ggtatgtaaa aaaatgggga gctggatgaa
     1381 atgtcaggct attttcaaaa acgaatgctt aaatatccac tatacggtct gattgcagcg
     1441 acaattattt tgagcgtaat cacgttcttt ttttcgtggt ggctatcggc gttagttgtt
     1501 gttggcggaa ttattcttac ggttgcgatg ttttattttg aatatcgctt gaatgaagat
     1561 gtgcaactat atgtttctaa tttaacgtat cggattaagc gtagtgaaga agaagcgctt
     1621 gttgagatgc cgatgggaat acttctgtat gatgaacatt acaaaatcga atgggttaac
     1681 ccgtttatgt cgaaatactt tgataaggca gagctaattg gggaatcttt ggaagaagta
     1741 ggacctgaat ttttggacgt tattactggg aatgatgaga aggggattat gtcgattgct
     1801 tggcgtgatc accgttttga tacgatagta aagcgtaagg aacggatttt gtatttatat
     1861 gaccgaacag aatattatga tttaaataag aagtttcagg cgaataaatc tgtttttgcg
     1921 gttattttct tagataatta tgatgaatgg gcgcagggca tggatgatag acgtcgcagt
     1981 gctttaaata atttggtgac gtcgatgttg actaactggg ccagagaaca tcgtatttat
     2041 ttgaaacgga tttcgacaga ccgctttatg gcctttttga cggaggaaat gttgaagcgg
     2101 ttggaggaag agaagtttca aatcttggac cggattcgcg aacggacgtc gaagcaaaat
     2161 attccattaa cgcttagtat tgggattggt tataaggaag atgatttgat tcagctggcc
     2221 gatttggcac agtctagtct ggaccttgct ttagggcgcg gcggagatca ggtcgtaatt
     2281 aagcaacctg aaggaaaagt gcgtttttat ggcgggaaaa caaatccgat ggaaaaacgg
     2341 actcgtgttc gcgcacgtgt tatctcgcaa gccttgcaag agttgattac gcaaagtgac
     2401 caagtttttg ttatggggca ccgctatccg gatatggacg taattggttc gagtcttgga
     2461 gtgatgcgga ttgcggagat gaatgatcgg aatgcttatg tggtcgtgga acctggcaaa
     2521 atgagtccag atgtgaagcg attaatgaat gaaattgaag aatatccaaa tgtgattaaa
     2581 aatatagtta caccgcaagt cgcgctagaa aatatcacgg agaagagttt gcttgtggtt
     2641 gttgatacgc acaaaccttc gatggttatt aataaggaat tgcttgactc ggctacgaat
     2701 gtggtggttg tcgatcacca tcgtcgttca gaggaatttg ttggaagccc ggtgcttgtt
     2761 tatatcgaac catatgcgtc atctactgcc gaattgatta cggagctgtt tgagtatcaa
     2821 ccggatttag agcaggttgg gaaaatcgag gcaacggcgc ttctttccgg gattgtggtt
     2881 gatacgaaga actttacgct acggactggg tcgcgaacgt tcgatgcggc gagctattta
     2941 cggtcgcttg gtgcggacac gattttggtt cagcaatttt tgaaggaaga tattactact
     3001 tttactcagc ggagtcgttt agttgagtcg cttgaaattt atcatgatgg tatggcgatt
     3061 gcgactggac atgaagacga ggaatttggc acagttatag ctgcgcaggc ggcagatacg
     3121 atgctttcga tggaaggcgt gcaggcatcc tttgttatta cgctacgtcc ggataaatta
     3181 atcgggatta gcgcgagatc gcttggtcaa atcaatgtgc aagtcattat ggaaaaacta
     3241 ggcggtggcg gacatttatc gaatgcagcc acacagctta aagatgttac aattgcagaa
     3301 gcagaaaaac aattaattag cgccattgat gcgtattgga agggagaaac ataattatga
     3361 aagttatttt cttgaaagac gtaaaaggta aaggtaaaaa aggtgaaact aaaaatgttg
     3421 ctgatggtta tgcaaacaat tttttaatta aaaatggtta cgcagttgag gctaataatg
     3481 cggctttaag cactctttca gcgcaaaaga aaaaagaaga taaattagct gctgaagaac
     3541 tagctgaagc aaaagctttg aaagaaaaaa tggaaaattt aacagtggaa ttaaaagcga
     3601 agtctggtga aggcggcaga ttgtttggtt ctattacatc taaacaaatt gctcaaacgc
     3661 ttgaaaaaac acatggtatt aaaatagata aacgtaaaat ggatctacca gaggcaattc
     3721 gagctttagg gcatacgaag gtgccggtga agttgcacca tgaagtaacg gcaacacttg
     3781 atgtacatgt gagtgaagaa taatttttct taagggagcg taagacagtg gataataatt
     3841 tccaggacag aacaccacca caaaatattg aagccgaaca agctgtactg ggcgcgatat
     3901 ttcttgagcc aaatgcgctg attactgctt ctgaaatttt aatgccggat gatttttatc
     3961 gaactggtca ccaaatcatt ttcgaaacga tgcttgattt gaacgaccac gggaaggctg
     4021 tcgatgtttt aacagtatat gaggcgcttg ctgccaaggg taatttagaa gatgcgggcg
     4081 gtttgcctta tttgacggaa ttatccggtg ctgtaccgac tgcggctaac ttggaatact
     4141 atgcccatat tatcgaggac aaggcgcttc taagacgttt aattagaact gctacccaaa
     4201 ttgcaacaga tggatattcg cgcgaagacg agctcgatat gcttatggac gaagcggaaa
     4261 agagtatctt ggaagtttcg caacgtaaaa atgttggtgc attcaagaat attaaagatg
     4321 tcctagttaa aacttatgat gatattgaaa ttttgcataa tcgcaaaggt gatattactg
     4381 ggattccaac tggatttaac gagctggata aaatgacagc tggatttcag cggaatgatt
     4441 taattattgt tgccgcgcgt ccttctgttg gtaaaacagc attcgcccta aacattgcgc
     4501 aaaatgttgc aacgaaaacc gacgagaatg tggccatttt tagtttggaa atgggtgcgg
     4561 aacaacttgt tatgcggatg ctttgtgcgg aaggaaatat taatgcgcag aatttacgga
     4621 cgggtgcttt aacgagcgat gattggcaaa agctgacaat cgcgatgggt acactttcta
     4681 attcggggat atatattgat gatacgccgg gtgttcgggt gaatgaaatt cgttccaaat
     4741 gtcgccgttt aaaacaagaa actggtcttg gtatgattgt gattgattac ttgcaactga
     4801 ttgcagggag cggtcgtggt ggcgaaaata gacaacaaga agtttctgaa atttctcggt
     4861 cgttaaaagc tttggcgcga gaacttgaag tgccggttat tgcactttcg cagttatctc
     4921 gtagtgtaga gcaacgtcaa gataaacgcc caatgatgtc agatattcgt gaatctggtt
     4981 cgattgagca agatgccgat atcgtagcct ttttataccg ggaagattac tatgaccggg
     5041 aaggtgaaaa tgatggcacg attgagatta ttattgcgaa acaacgtaat ggtccagttg
     5101 gtgacgtgaa actagccttt gtaaaagaat acaataagtt tgtgaattta gaagtgcggt
     5161 acgacgacgc aatggcttaa tgaggaaacc ttgtgaaatt caaattagat ttggagttcg
     5221 caaggttttt attttatgca aaaaggtaac gtattactat taatggactt tgaaattccc
     5281 gtaaaaagat taaaaaagcg aacgataaaa ttaccttaca aatcaatgtt cgtaaatcca
     5341 ttgactattt tggtggcaaa cggtacaatg tatagtggaa aatgaagagg ctatgaaaac
     5401 gcatagctat caaagaccaa ttaaatgagg tgtttaaatg tcttcagttg ttgtagtagg
     5461 aacacagtgg ggcgatgaag gaaaagggaa gattacagat tttctttccg aaaatgcaga
     5521 agcgattgct agatatcaag gtgggaacaa tgcaggccat acaattaagt ttgatggcgt
     5581 aacgtacaaa ttacacttaa ttccatcagg tatcttttac aaagaaaaaa ttagtgttat
     5641 tggtaacggt atggttgtgg atccaaaagc tttagtggag gaattaaaat atcttcatga
     5701 taaaggcgtg gatacttcta atttgcgtat ttctaaccgt gcgcacatta ttttaccata
     5761 tcacattcgt attgatgaag ctgacgaaga acgtaagggc gcaaacaaaa tcggtacaac
     5821 gaaaaaaggt attggcccag cttacatgga taaagcagcg cgtgtaggta ttcgtattat
     5881 tgatttatta gataaagaaa catttaaaga gaaattagag cataatcttg gcgagaaaaa
     5941 ccgtttatta gaacgttttt acgaactaga aggctttaaa ctagaagata ttttagaaga
     6001 atattatgac tatggtcaac aatttaaaga atatgtttgc gatacatctg ttgttttaaa
     6061 tgacgcatta gatgatggta aacgtgtatt atttgaaggt gcgcaagggg ttatgcttga
     6121 tattgatcaa ggaacatatc catttgtaac ttcaagtaac ccgattgctg gtggcgtaac
     6181 tatcggtagt ggcgtaggtc cttcaaaaat caatcatgtt gttggtgtgg cgaaagctta
     6241 tacaacacgt gttggtgatg gtcctttccc aacagaatta ttcgatacta ttggggacac
     6301 tatccgtgag gttggtcatg agtatggtac aacgactggt cgtccgcgcc gtgtaggttg
     6361 gtttgacagt gtagtggttc gccatgcgcg tcgtgttagt ggcttaacag atttatcgtt
     6421 aacactactg gatgttttga caggaattga aacacttaaa atctgcgtag cttacaaatt
     6481 agacggaaaa acaattacag agttcccggc aagtctgaaa gatctagctc gttgcgaacc
     6541 tgtatatgaa gaacttccag gctggacgga agatattact ggagttacat cactcgatga
     6601 tcttccggtg aactgccgcc attacatgga gcgtattgca cagctaactg gtgtgcaggt
     6661 ttctatgttc tctgtaggcc ctgatcgcgc tcaaacacat gtcattaaaa gcgtttggcg
     6721 tttagcttaa taaaataaat atcaagccca tctaaggtgt attcttggat gggctttttt
     6781 gctgtataaa aataatagtg attctggaaa agtatacaat tttttatccg aaaaattgaa
     6841 aaagttaaca aaaggggaag gtgtttgtga aaaaggcatc tttttgtata gtgatgttgt
     6901 ttttaaaaga cctattatca agtctttata ggagttttat tcgtattttt gtcacatttt
     6961 actttgtgaa ttcatgttat aatttgagag tgatatctta ttcacaatag ataataagag
     7021 gagatgaagt gaatgtcagg tcaaattcgt atgagtccaa gcgaactacg tgatcgcgcg
     7081 aaaacttacg gtcaaagtgg tcgggatatt gaggatattc taagtcgttt aagtcaacta
     7141 caagaacaac tacgtagcga atgggaaggt caagctttta tgcgttttga tgatcaattt
     7201 gaacaattaa aaccaaaagt aactgaattc gcaaacttaa tggatcaaat taacgatcaa
     7261 cttgagaaga cagcaaacgc agtagaagag cacgatcaac aactttctca aaacttcgga
     7321 ttctaaaatc aacaaaaagt ggggcataca tacaaatatc gttggatgct ttacgaaaag
     7381 ccatgcagtt ttttgcatgg ctttttctaa acatagaaag cttatgccta aaaaggtatt
     7441 tatataaaaa agacacagcg ggagtgggac atgaatgaag aaagtaaaat ggagtatttt
     7501 actcttttta gtcttggcga tttttctttc ggcaggaatt acttatttgg ctttgaatca
     7561 aagttcgaat aaggagtcta aaaataatag tgaaaaaaca cacaagatga ctatcgcact
     7621 tgtaaatgag gaccaaggag acaacttcca aggtaaacaa gtagagtttg gtaatcaatt
     7681 tgttaaaagt attgaaaaag atgatacgca tgaatggtac gttgttagcc gcggagttgc
     7741 agaaagtggc ttaaaacgag atgtatacaa tatgatgatc gttatcccga gtgacttttc
     7801 tgaaaaagca atgtcaatga cttcgagcgc cccggaaaaa gtgacaatta gctacaaagt
     7861 taacgatgta ggaaatagcg atttaaaagc ggaagccgaa aaaacagcag cttctgtatt
     7921 ggaagatttc aattcacgga ttattgatgt ttattttgca agcattttaa caactttaca
     7981 agaagcgcag gataatattg gaaccctagt taaagaagag aaaaagtatg acgctatcta
     8041 caacaaagat gtaaataatc cgttatccag ctacacaaaa cagtttaaaa cggtgcaaga
     8101 ctacacagga acttctaaag aaagcttcca aggtttccaa gatattatga aagaatttga
     8161 ggaaagccta aatctctctc aaaaagaaaa cgaagaacat atgaaaaaca tggatgcttt
     8221 tacaaaaaca caagaggaaa atgctccttt tggggcagaa ttcacagaaa atttgtcaaa
     8281 atttgatggc actttatcag cagaagatat tcgaatgcaa acggccgctt tagaacaagc
     8341 caatgcgaaa atgacttcag aatttcaaat tttagaagat agtaattcat tgttatcaca
     8401 aacacaggcc ttacagagct atatagctga aaccaatgca cggattgatg cggtggatgc
     8461 cgagattatg ggaacgctcg aaaatcattt tcggacggct gtttataatg acttgttgcg
     8521 tattttacga gaaaacgagt actcggataa gttgaatgaa attggcctta aagatttgac
     8581 cggagaagat attaatgctg gctttaacaa aatgattgtt aaggaaatac aatcattacc
     8641 aacatataat gcggatcaat tagcgtcgat tgggcttgat gaagagatgt acaaaaatgt
     8701 tgtaacgctc tctaaggaat attatagtaa ccatcgcagt gcttttggcg aaggttttag
     8761 ctttacgact gatcccaaaa ctctaccaac tgacacactg aaaagcgata cgattaatcg
     8821 attgaaatcc gaaggggtca cgctagaaag cagttcctat acggtggaag gtagcgatta
     8881 tccaacagaa ataattctaa ctttagatga aaatttcact ttttcagatg ttgattgttt
     8941 ggttaatgga agcagtaatc cagagttagt tcaacaaacc gcatacggag aaaatggcat
     9001 aaagcttagt atacaggcgc ttggaagtac accggcagag attaaaatca ccggaaaagc
     9061 gaagttgcga gaaggtgtga atgttccatt aattggtgct gtaaattgga atgctacact
     9121 gcagcaatat gagaaaaaag aatatagtga aatgccaaca attccatcag agcttgatcc
     9181 tactaccccg gatacttcat taatagttag aaaagaacct gtaccgatta aggtcactgc
     9241 accaacatat ttgaatgaga cgaagagttc tgtaaaagca attactaata cagtaaaaga
     9301 ttactataaa ctacaagcat tatttgattt atattacgga attgatgcga gtgattctgg
     9361 acaaataccg gattttagta attatcaagt gacattagaa aattctgcga aagcatcctc
     9421 gtattattat atttttaata aagaagatgt gattggtagc tttgtaaatc ttactacaga
     9481 tcggtttgtg gcagattata cgaaaaaaat caaagctttt gagaagcgaa ttgatgacta
     9541 caaaaataca atggctgagg ccaattccag atcagaagac gtaacaaata gattaaacga
     9601 aacgacgcaa gaagctatta atttaaatac aaatctagcg ttaacgttgc aaaacctaga
     9661 atcttggcga gaggcaagca aaggtttaat agaagaaaat ggcgttgttt tagaaaaatc
     9721 tggcgaagaa gccacgatgg cactgcaatt aagctccgag tttgccgggc ttttagcgga
     9781 aagtgaatcg ttagctggta cttctgaagg taatttgaag tcagcggaag tcgtgtacaa
     9841 aacttttgaa gcgattgata aggaagccaa aaatattcaa caaagcggag aaactttagt
     9901 aaaagaagca tctacactat ccgatgattt aagcgaaaaa ttggaagacg acgaaacgtt
     9961 ccagaaaaat ttcgctaagg ttatggaaaa tagccgtgtt ggtgatcgac aaaatgaaaa
    10021 tctatatagt ttcttaagta gtccggtcga taagatgaat gctgggacta ttgttgcggg
    10081 tgacaaatca atgccatact tcatgatttt gatttgtacg attctggcaa ttttcactag
    10141 ctacgttatt tcacaccaag agaaaaaacg tgaacaatta aatgaatttg agaaagaaat
    10201 gtcgcttgtc tttaaaaata ttccaattac tttcctagcg atttgtgttg ggattattga
    10261 ggggctcata ataggcgcca tttcaggatt tatttttgaa gttggagaaa ttgggatgtt
    10321 cctatggata ggtgtctgcg ttctaattat gatgacgtta gttactgctt tttcatattt
    10381 attacgtcag ttcaacatga ttgggatgtc gattatttta ctcgttttaa gtttgtatct
    10441 attcttaacg gatgcagttg gacttaacat tgataatgaa tctattttcg cgacgttcag
    10501 aacgttctcg ccacttcaat acatggaata cttattgaat gggattttaa gtgcccagaa
    10561 agattacatt attgtcgtat acagtttgat tggggcggct ctattattta ctggtctcaa
    10621 cctatttgtc tggcaccgtt ctaaagaaga agtagaggag gacgattcag atgaaattta
    10681 aaatagcagc actacttatg ttactttgtt ttgcttttgc tccgggagtt ctcgctgcgg
    10741 attcagatag ctatttagaa aacaatggga aaatggacat caaaacagat agacttcaaa
    10801 aaacagaaga agaaaaaaca aaagaactag aacagatgga ggaaacggag ctcgataaga
    10861 acggaattcc actttttact gacgaaatgg acgaaaaaat cgccaaagaa aaagcggcag
    10921 agaaagcgga atatgaccgg attaaagact cactttttga agaggaatct acatctggtg
    10981 aaacagtgaa aaaaacgaaa gagaagttgt ttacagacga gtacgagaca acagctgtaa
    11041 acacggaaac acctactact acggaaacaa cagtagaaga tgaaacgaaa aaaacaaaac
    11101 aaaaaacagt tggtggagca attgcaggaa cacttgtagc tttagcaggc gggatttatg
    11161 tggctgcgcg caatgttttt gaatagaaag cggggagttt taaatggcta aaaacacaca
    11221 tatgaatgtg acagttgatt tcactaattg gggagcaagc aagtatgatt tgcgaattcc
    11281 ggtgcatcaa ccaatcaaag cattaattat caatttggca gaaacgctca aaatcgatta
    11341 caaagatttg tccaaatgta cgataaaaac aacgaataaa gcgatattac taagcgatga
    11401 tgacaaattg actaattttc aaattgcgga cggagacatc ttagaaattt tatagaaaaa
    11461 aaggagaata aaaacgatga ataagacaat tgaaatggac ggaacaactt acgattttac
    11521 ttatgaggat ctagtttgga gcattacgtt tccaaaatca aaaacacgcg ctaaagaact
    11581 cgcacaacta gaactattag aaaaacctgc gacacatttt actcctgcaa aaatctcaag
    11641 tgatagcgat tcgtatacaa tttcttatga gattgcgaaa cgtacttatg gatttgaaca
    11701 agttcgaaaa atgggacgtg aagataaact gcgcgcactg cggaatattg cggatttagg
    11761 cgaattgtta aacacgcgct atacattctt tttacacccg gataatctga ttttcgatat
    11821 taacttagtg ccaagtattg ttcatcgggg cattaaaaat atattaccgc cttatgaact
    11881 aacagaagaa acttttttca aacaatatca atgtttcgtt attgcgatgt tttctaagaa
    11941 attctctttt gaaaacttgt acaatggctc gctatcaggg gctagaggaa cgcaatttga
    12001 gaagagtata ttagatgcaa aaacggtgca agatattgct actattttag aagaagcata
    12061 cgtgaaagaa catgcggcgg ttcaaaaaaa tatggcaagc gtaccgaaga aaaaatacag
    12121 tactttccgt gggttggcgg ttggtttcat tatcgtcgct attttacttg caattccagt
    12181 aagttatttt gccttcgtta aagtccctct gcaaaatgac ttactaacgg caaacgagaa
    12241 tttcctgaaa acagattacg ataaagtgat tacaggtcta gaaaatgtgg atccagaaaa
    12301 aatgccgcag tctgtccaat atgaattagc ttattcctat gttaaaggcg aaaaaatgag
    12361 cgataaaaag aaagaaaaca ttatgaatac aatcagctta aaatctgacg ccaaaaactt
    12421 actttactgg atttacaatg gtcgcggaga atttagtaaa tcacttgata ttgccaaact
    12481 tttagacgac ccaacgcttg cgatgtacag tttaacaaaa caaattgaac aggtacaaag
    12541 tgatacaaca ttaagcggcg atgaaaaagt ggaaaaacta aaaactttgg aagaaagctt
    12601 gaaagaatac gatgaaaaag taaatgaatc aactacaact gaagatgaaa caacaaatac
    12661 agaagcaaaa taagggagaa tggaccatga atagagaggc tttattaatt gttagtaacg
    12721 ggcagcaatg tcataaaaac cacttgtctc ctgaaaaagt cgtgacaatt gggaatacaa
    12781 tcgaacacga aatcacttat cctgaactgg ctgagtcgat tgaagttaaa tacgatgaag
    12841 gctcttggaa tgctggaaca acagcgctcc aagcgaatca agctgtaaat gtagagaact
    12901 tagcattcta tctatgccaa gatttacata cacaagttta tgatgttgta acgaatattt
    12961 ctgtgacatt tggcgttgga atagaaaatg atgtcacatt agatgataca aaatcagatt
    13021 ttatactttt acgtgatgca aaggaaaaac tgtttaagtt acaagtctta aatggcgaag
    13081 tttatcataa cttttctcta gtaacggaag actgcgttct agaaccgggt gatcagctct
    13141 atacggacgg tgtgacgatt acaatcggaa aagaagatat tagtgtgcta gctgtgaaaa
    13201 atcgcgtgac gagcaaatta gcgcctttat ttgctgcgga caattcgttc ggggaagatt
    13261 atccggatta ccaccgttca ccgcggatta tttaccgtgc gccagaagaa aaaatcagca
    13321 tggcgaaacc gtcaagtaaa ccctcaaaac caacagatgg cttaattaaa attattttac
    13381 caccccttat catggtggca attacggtca tgatttccat tttccaacca cgtggacttt
    13441 atattattat gacaatcgca atgtcagcag tgacaatcac aatggcgatt cttaactaca
    13501 taaaatcacg taaaaaatac aaaatcgatt ccaaacaacg cgtggaaagc tacgatttgt
    13561 atttaaaacg aaaaacgaaa gaattgcacg aaacaagcga aaaacagcgt cacgctttaa
    13621 cctatcacta tccagacgta actgaactag aaaaaatggc gttacgtgtg gattcgcgga
    13681 tttacgaaaa aacaatgttc catcatgatt tcttgacttt ccgagttggt cgaggcgacg
    13741 aagcaagtag cttttccgtg gaattccaac aggaagagtt cagccaagaa aaagacgaac
    13801 ttgtagaaga agctgtgaaa attaaagggc aatatttatc aatcaatgaa gtgccagttg
    13861 cgacagattt aatgcacgga ccagtggggt atatcgggcc acgccgttta gtattagaac
    13921 aactgcaaat gttagtaatg caaacatccc ttttccatag ttattatgat ttgcaattta
    13981 ttacgatttt cccagaagaa gagaaggcgg attgggactg gatgcgctgg ctaccgcatg
    14041 cgaatatgcg tgatgtgaat gtgcgtggtt ttgtttacca tgaacgttcg cgcgaccaag
    14101 tgttgaactc gctttatcaa attttaaaag agcgtaaaca agcgcttact gaacaagcga
    14161 gcaaacagga aaaattatac tttacgccac attatgtggt tttaattacc gacgaaaaat
    14221 tagtactcga tcacacggtt atggaattct tcaatgaaga tccaagcgaa ctaggtgttt
    14281 ctttagtgtt cgtacaggac gtaatggaga gcttgccaga acacgtgaaa acggtcgtgg
    14341 atattcgtga tgcgaagagc gggaacatta ttttggaaca aggcgacctt gtaaaccgag
    14401 cgttcgtgcc ggatcatttg ccagcagatt ttgacaaaga agtaatcagc cgggctcttg
    14461 cgccgctaaa ccatcttcaa aacttgaaaa actcgatccc agaatccgtt acttttcttg
    14521 aaatgtacgg tgtagagcgc gtcgaagagt taaacattgc tggacgctgg gcgaaaaatg
    14581 aaacgtataa gagccttgct gtaccacttg gcttgcgcgg aaaagacgat atcgttcaac
    14641 tgaatttaca tgaaaaagcg cacgggccgc atggtttggt agccggaaca actggttctg
    14701 gtaaatcaga aatcattcag tcttacatta tctcacttgg cgtcaatttc cacccatatg
    14761 aagtcgcgtt cttgctgatt gactataagg gcggcggtat ggcgaactta tttaaaaata
    14821 tgccacattt actgggaaca attacaaact tggacggcgc gcaatccatg cgtgcactag
    14881 cttccatcaa agccgaattg cagaaaaggc aacggttatt tggcgagcac gatgttaacc
    14941 acatcaacca ataccaaaaa ctatacaaac aaggaaaagc gaccgaacca atgccgcatt
    15001 tattccttat ttcagatgag ttcgccgagt tgaaatcaga acaaccagaa ttcatgaaag
    15061 aacttgtttc gacagcacgt atcgggcgtt cactcggaat ccatttaatc ctagcaaccc
    15121 aaaaaccaag tggcgtcgtg gatgaccaaa tctggtccaa ctccaaattc aaactagccc
    15181 tcaaagtaca aaacgccagc gattcaaacg aaattttgaa aacaccagac gcagcagaaa
    15241 tcacactacc aggccgttcg tacttgcaag ttggtaataa cgaaatttac gaactgttcc
    15301 aaagtgcttg gagtggtgcg gattacgtgc cagataagga aagcacggat tatattgata
    15361 cgacgattta tgcgattaat gatttaggtc agtatgatat tttgacagag gatttgagcg
    15421 gattagataa gaaggatgat ttgactaagt tgccgagtga acttgatgcg gtgattgatc
    15481 atattcatgc gtatacggag gcttctggga ttaaggcgtt gccgagacct tggttgccgc
    15541 cgctacctga acgaattttc gcccaagact tacatccagt caattttgaa gaagcatgga
    15601 aagaaccgaa aaaaccactt caagcaacaa ttggtttact ggatcaaccc gaattacaag
    15661 cacaagtccc attaacactc gatttaacaa aagatggaca cgtggctgta ttctcaagtc
    15721 cagggtttgg gaaatccacc ttcttgcaaa gtttagtgat ggatttagct cgtcaacata
    15781 atccagagca actgcatgtt tatttgttgg attttgggac gaatgggttg ctacctctag
    15841 tagatctgcc acatattgct gatacaatga tggtggatga agttgaaaaa atacagaaat
    15901 ttttacgaat ctgcctaaat gaaataaaaa caaggaagaa gcttcttagc caatatcgtg
    15961 ttgcaaatat agagcagtat gaaagagcaa gtggaaaaga actacctaat attattgttg
    16021 ttctagataa ttacgacgct gtaaaagatg caggcttagg ggatgatttt gaaaaaatca
    16081 ttactcaaat tactcgtgaa ggtgcatcca ttggaatgtt tatgattatt agcgcatcaa
    16141 ggcatatgag tttgagaaca caaatggcta ctaatattaa acaaatgatt gctttatatc
    16201 taattgataa aaatgatata tcatcaactg ttggtcgaac ggatacacca cttgaagagt
    16261 atccaggaag agcgcttgta aaattagaaa cagttacaac atttcaaacg acgttaccat
    16321 cgcacggaga agaaacaatt caacagattg aaggtattcg aaatgaagca aaattaatga
    16381 gagaaggttg gcaaggagaa cttccagaga gcgtaccaat gattccagaa aaaattaaac
    16441 tagctgattt ttgtgaatgg atggaaacta aagaggtcgt tgcaaatgga aatataccta
    16501 tcggagttga ttttgaatac gtaaaaccag taggcattga ttacaagcaa accggagtac
    16561 taattattgc agatgtaatt ggacgaaact tagtaagcat aaataaaaat gtagctaatt
    16621 ctcttgtgca aaatccaaat atttctctct taattagcga cacagcgaat tttgatttag
    16681 tggaaatgtc tactaaagcc aatttataca gtaacaacac agaggatttg aagcagaata
    16741 tgaaaaaagt actctctatt tatcaatcca gaactgaaaa agcagatgaa cttcgaaaag
    16801 caggagataa tttaggcgta actgccatga ttcaaggatt aaaagatata gttgctttcg
    16861 taggagatta cgatatctta ctaaaaactc ttgatgaaga agaccaaaaa gttctaatag
    16921 atatgattaa caatggaaaa acatatggtt gctatttaat tttaagtggt tcgattcaag
    16981 catttaaagg atatggtgat ttgaataaag ctgttcaagc tcaaagaaac tatatattct
    17041 ttgatcgact atcgaattca agcccattct ccttctcgtt taatatttat agagaacaag
    17101 aattattacc tgaggaaggt tatgtaatag caggacaaga gtggcaaaaa ataaaaattg
    17161 caaaatatga agaagaggtg taaggaaaat gctaacaaaa gaaatattac ctattggaag
    17221 cgttgtttat ttaaaagaaa gcctgaagaa agttatgatt acgagtagat taattacaat
    17281 tcagggagat gaagaaaaag aattttatga ttatggaggt gtagtttatc cagaagggac
    17341 aaaggatgac aatattttgg catttgatgc agaagatata acagatgtga agtttagagg
    17401 ttttgtagat gatgatgagg tagtcttggt gaagagaatg agagaatggc agaaagaaga
    17461 atttggtgtt tctccagaag aggaggatga gatgcttgaa ttatgatgaa cgtgtacgag
    17521 ttttaattga gttgaaggtt gatttgtccg ggaaattaga aatgatggaa aatgaagaag
    17581 cgttattatg tagacaaaaa catgattttg caagtgcctg gtcaaatgca aaaacagagg
    17641 atgcttacag aaaattaaat gaagcagtta gaaagaaaat caaagaaaca acggaatatg
    17701 caagagaaat tgatgaaaaa attactgctc gtatcaaacg aattgaagca gcatataaag
    17761 cagaatatca gagtaatagg agctatacat ggcgtattgc agaaatcgat ccaattaaat
    17821 ttaaagaaaa gtataatgaa agattaaatc agttaagcta cttatcatgt gatggcagtg
    17881 taaaaacacg tttaataaaa gagtttcggc aaaataattt cctgaaatag gaggatgaaa
    17941 tatggtaagt ccaatgccag ataaaacagt aaaaatggat aaaggaagta ttaatcctaa
    18001 attagataaa ctaatttcaa gtctagacaa ttttgataat atcaataaga aaatgggcac
    18061 tatagtaggt agccaggaga ttagtgggga agcagcagat gctttatctg agagcctatt
    18121 agtgctagta agttatgggg aacaatatag tttagtaatt agaaacctaa aagaagtgat
    18181 agtcgactat tgtaaaagtg tggaagaaat tgataaaaca gcagcaaacg cagtaagtaa
    18241 aggcgtttaa aaagaaagag gttaaactat gaaaagtaga aattggttaa aaggattggg
    18301 agtaacaatg attgtcgtta ctttaatttt aacgggatgc ggaaatggag acgctgaaaa
    18361 gacagataca aaggaacaga ctaaaagtgt tgaagaagaa ggaaaagaag taaagattga
    18421 gagtaatgaa gggaagccac agcatgaaca acttataaca gtgaagttgc cgccagaagc
    18481 agagtattta aatgatgaaa cgttagaagt gtatgagcaa gataaaaaga agtatgacca
    18541 gacagagcaa ctaattacta ataactcagt tacaattcta ttaggtgatt tttgctatta
    18601 tgagccggca tggagcagtc ttacatgttc tgcaattctt gtgaatggaa ctgacacaaa
    18661 tattgaagac cttagcttca aagctgaaat aatgaataag ccaatgtcag gaaaaatttt
    18721 ttcagatgac aaagttccag aacttacaaa agcaaaaaca ggaaaattcc agccaaacga
    18781 gggtatacca attattttag ttttctcaga agagaacccg aaaaatgagg aaaatgcgga
    18841 gcctcaaaaa attaacatta aagatataaa ggttaagata aaggatattc aatataaagc
    18901 agttaaatag gagggagaaa gatggcaaaa gaaattaagg taaatccaga ttttttgaag
    18961 aaggttgaaa gcaatgtaac aaattacatt gatgcccaga aagaggtttc tgttgaatta
    19021 ctagcagtta ggaccaactt agcaagtaat ttttcaggta ttgcttgcga cgaaataaaa
    19081 aattatataa cagaattaat gaatgatcta gaaaaagaat ttggtgtatt tattacaagg
    19141 aatcatgaaa aagttaaggc gttaggggaa agttataaag aacttgatgg tcagttggga
    19201 caaaccttta actatggaat ggagaggact aaatgagcgg aaaaataaaa ttcaatatcg
    19261 ccgaagctca aaatattagt cttgagctga aaattgcagc aggtaggtat acgcaagaaa
    19321 cagaagagct attaaaagtg ctgaaaaata atagtttatg tgataaagac caagatgtcg
    19381 ttgaacagag ggggcgaata gagaagaata accaaagact tatagaatat gagaaatttg
    19441 taaacacaaa tctcgctaaa tctaattcag ttatagaaga attgtttatg agtgtagaag
    19501 tattgtatgc acagcaagtt tctgagttta gaaaccctaa ttctgcgggt tataaagaat
    19561 taatgggaaa tgtgaaagcg atatcatatc aaaaaatttc acagatttca ggattgggag
    19621 aaatgcttac atcgaaaggt tcggtgggag caattaaaga tatcagagac acactacttg
    19681 gaacattggt agatgatact tacttgaaat taattgatga tacagttgaa tatcaaggag
    19741 aaaataaaaa tataactgat ttatatgggg ataaaatatc taaagtgggg tcaaggagaa
    19801 aaaaattgga cactccaacc aaataccttt caacagccta cctcatctca gacacgctaa
    19861 aaagttttaa cagttatgga aatagcaaag attcctctcg acttgcagga gatctaaccg
    19921 gtatagcaat aacaaaaggt gcggattttg ctgttgggaa attagctact acggcattat
    19981 ctggttttgg tgtaagtggt gttaaaggcg ctatcgcagg cgccattatt tccgttgctg
    20041 cagataaaat tattgatccg acggttgaat atgttaaaga gagcaaggta gaagcaaaga
    20101 gggatgactg ggaaacaaaa ggtatatata aaggctggaa aaaaattcga gatttaaaac
    20161 tagaatatac aatgggtaac tatcaagcaa gttaacagtt aaaaatataa gattttttac
    20221 ctaataaaaa tgacagcagt atctatatga gactactaac aacttcacca tgtgcgttac
    20281 aaataaaagg aggaaaaaat gtatattaat ttaaaatcca gtgatggaaa tgtgattaca
    20341 acaaaagttg gttcttgctg gacctgtgta tttctttcgt tctttggtcc tttactccga
    20401 ggagatatta aattcttcgt tctttatgta atattagatg gagcggggct tttcatcact
    20461 ttgaattatg atagagatat cggaatagct atcatggcta tggtaacttt actctttgaa
    20521 tccaattata atacatggtt tatccgcggg aagatgaaca acgggtggga accagaaaca
    20581 gagaaagatc gagaaatatt gttagaaaaa ggcgtcatta aaacagaggt atagtatata
    20641 aatccaattc gaaagggact caataaaatg aattcaaatg aaatttcaga gattataatt
    20701 cagcaaaata
//
LOCUS       DASDYO010000041        20287 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.041, whole genome shotgun sequence.
ACCESSION   DASDYO010000041 DASDYO010000000
VERSION     DASDYO010000041.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 20287)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20287)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20287
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.041"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            20..1225
                     /locus_tag="U0290_001275"
     CDS             20..1225
                     /locus_tag="U0290_001275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonium transporter"
                     /protein_id="HEM2301320.1"
                     /translation="MESVFMFFCTLLVWLMTPGIALFYGGMVRRKNVLSTAMYSFSSM
                     AIVSILWVIVGYSLAFAPGNGFIGSFDWTFLHNVGFAANDTYSDAIPHILFMMFQMTF
                     AILTVAIISGAFAERMNFSAYLIFIILWSLLVYSPVAHWVWGDGGWLRNLGALDFAGG
                     NVVHISSGVTGLVLAIMIGRRKEADSASPHNLPLALIGGILVWFGWYGFNVGSALTID
                     NVAMIAFVNTNTAAAAGIIGWGLVEWLTNKKPTMLGTISGAIAGLVSITPAAGFVTVP
                     SSLIIGFLGGALCFWAVFWLKGKVKYDDALDAFGLHGIGGIWGGIATGLFATTKVNEA
                     GADGLFYGNASLVVKQLIAIGSTVAYVAIATAIIVVIIKLFLPIRVNEEQEYKGLDLT
                     LHGEKAYQE"
     gene            1239..1604
                     /locus_tag="U0290_001276"
     CDS             1239..1604
                     /locus_tag="U0290_001276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="P-II family nitrogen regulator"
                     /protein_id="HEM2301321.1"
                     /translation="MSGLTKIEIITRPNRFHLFQKELAKIGVSGLTVTKALGTGLEKG
                     FIELYRGTKKESNIHERMKIEIVVSTVPVEDVLRVVKETLRTGEPGDGKVFIYPLAEV
                     VKISTGETGIDALQDKPSK"
     gene            1754..2134
                     /locus_tag="U0290_001277"
     CDS             1754..2134
                     /locus_tag="U0290_001277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301322.1"
                     /translation="MRKIPIFTVLVAILLFGGYYLYQHASSKVDVTFNFVVDQKSKNN
                     TITGKIDGAGNKSITLPLSEESWDAVKKGNRYNVEATFYNKNKISSSEAKELDGPFWS
                     NDSNRGLLVNKVHVENIQELSDDF"
     gene            complement(2174..3949)
                     /gene="aspS"
                     /locus_tag="U0290_001278"
     CDS             complement(2174..3949)
                     /gene="aspS"
                     /locus_tag="U0290_001278"
                     /EC_number="6.1.1.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate--tRNA ligase"
                     /protein_id="HEM2301323.1"
                     /translation="MEKRTSYCGELNEAHIGQSVVLHGWVQKRRDLGGLIFIDLRDRE
                     GIVQVVFNPEFSKEALEIADSVRNEFVVTIKGTVHARGEKAINEKLATGKVEVLAEEI
                     TILNSSKTPPFYIEDGVNVSDELRLKYRYLDLRRPEMNNIFKMRHTVTRTFRNKLDAL
                     GFFDIETPYLTKSTPEGARDYLVPSRVYPGNFYALPQSPQILKQLLMTAGFDKYYQIV
                     RCFRDEDLRGDRQPEFTQIDLETSFLTKEEIQAITEDMLVDVVKEAKNITIDKPFPRM
                     TYKEAMDRFGSDKPDIRFGLELQNVSDVVKDVDFKVFQSAIENGGEVKAINAKAAAAN
                     FSRKDLDALGVFVANYGAKGLAWLKVEAGELKGPIAKFFPEEKATELKASLQAEDGDL
                     LLFAADKADIVAASLGALRNKLGKELNLINEEELAFLWVTDWPLFEYDEEAGRYVSAH
                     HPFTLPKEEDIPLLETDSSKVMAEAYDIVLNGYEIGGGSLRIYKKEVQESMFRALGFT
                     DESAKEQFGFLMDALEYGTPPHGGIALGLDRIVMILAGRNNLRDTIAFPKTGSAVDPL
                     TNAPGEVSEAQLAELKLETVKKETN"
     gene            complement(3951..5228)
                     /locus_tag="U0290_001279"
     CDS             complement(3951..5228)
                     /locus_tag="U0290_001279"
                     /EC_number="6.1.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine--tRNA ligase"
                     /protein_id="HEM2301324.1"
                     /translation="MDLQLPRGTRDILPEEVSKWHFLETEFKKVCENYQYEEIRTPVF
                     EHTELFERGVGDSTDIVSKEMYTFQDKGGRSLTLRPEGTASVVRAFVEHKLYGEVSQP
                     IKMYYNEPMFRYERPQGGRQRQFTQMGIEALGSDDPSIDVEVISLAMEFFRKIGLINI
                     KLVINSLGDKESRLKHREALVAHFEPHIDEFCAECQVRLHKNPLRILDCKKDHDNPLI
                     QSAPSILDFLNEESVAYFENVKKYLNALEIPFEIDSTMVRGLDYYNHTTFEIMSVEEG
                     FGAKTTLCGGGRYHGLVREFGGPDTPGMGFGIGVERILLALEKADIKIPAKKPLEVYV
                     ITAQPEAELKAVTLVNKLRQNGISAEKDYLKRKFKAQLKDANRKNAVYTIILGEEELQ
                     TGNYQLKNMETGEQEAVSETTILEKLINTKGEN"
     misc_binding    complement(5292..5519)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            5679..6962
                     /locus_tag="U0290_001280"
     CDS             5679..6962
                     /locus_tag="U0290_001280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEM2301325.1"
                     /translation="MKNKFIFITVVSILLIAAGIFTTIAMANANSVVVKAEVLNVRSG
                     PGLAYDVTSQARKNEVLRVVGEENQWYKVQLDNGNSGWVASWLVENTDVSAASNSVAI
                     VSSDGGLNVREKPSTSSKALGLLNNGDQVTVTSQQNGWAQIQYNGTSAWVSSDYLTIR
                     ESVTKVDESELQTVTIRDDSTNIRNKPSRDGAVIEKANSGQGFAIQGVQGDWYKIRTT
                     SGEEGYVANWVVDVSDKGQTSSPRSKTTKLSEATIVIDPGHGGNDPGAKGSNGTIEKE
                     MTLKTAKQLKQKLEARGAKVILTRNSDKYVSLKGRTNIAAENNADVFISIHFDSLEDA
                     SKGVSGQTTYYYDNSDKSLAESINTTLGKDLPTTNRGARVGDYYVVRENSQPAVLLEL
                     GYLSSAKDESNINSASYRSQIAESVTDGLSNYFSN"
     gene            complement(7000..7452)
                     /locus_tag="U0290_001281"
     CDS             complement(7000..7452)
                     /locus_tag="U0290_001281"
                     /EC_number="3.1.1.96"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-tyrosyl-tRNA(Tyr) deacylase"
                     /protein_id="HEM2301326.1"
                     /translation="MRVLLQRCYEASVSVEEEVISEIAGGLCLLVGFTHKDTPETVDY
                     MAKKIVGLRIFEDESEKMNISLAERGGAILSVSQFALYADVSRGKRPSFTKSAPAEKA
                     ETLYDLFNQKLTEAGFIVETGVFGAMMDVKIVNHGPVTIMLDSDEMRK"
     gene            complement(7468..9684)
                     /locus_tag="U0290_001282"
     CDS             complement(7468..9684)
                     /locus_tag="U0290_001282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional (p)ppGpp
                     synthetase/guanosine-3',5'-bis(diphosphate)
                     3'-pyrophosphohydrolase"
                     /protein_id="HEM2301327.1"
                     /translation="MAKEQNLTAEQVIDMASHYMNQEHLALVKKAYEFARDSHKEQFR
                     KSGEPYIIHPIQVAGILVELKMDPSTVASGFLHDVVEDTPVTLADLEEVFGSEVAMLV
                     DGVTKLGKIKYKSHEEQQAENHRKMFIAMAQDIRVILIKLADRLHNMRTLKHLPVEKQ
                     RRIANETLEIFAPLAHRLGISRVKWELEDTALRYLNPQQYYRIVHLMKQKRDARERYL
                     HDVIDGVNENLDELNIQADISGRPKHIYSIYRKMSEQNKQFNEIYDLLAVRIVVSSIK
                     DCYAVLGIIHTRWKPMPGRFKDYIAMPKSNMYQSIHTTVIGPQGEPLEVQIRTHEMHQ
                     IAEYGVAAHWAYKEGKVVNSKTSFDNKLTWFREILEYQNESDNAEEFMESLKLDLFSD
                     VVYVFTPKGDVYELPNGSVPLDFAYRVHTEIGNKTIGAKINGKIVTLDYKLKTGDIID
                     ILTSKHSYGPSRDWLKLVQTSQARNKIKQFFKRQAKEENVEKGRDLVEKEIRQLGFES
                     KKIMTPENLRKLADKLNFSHEDDLFAAVGYNGITALQVANRLTEKLRKERELEAETEK
                     LLTQSENKPSNSDANNEKLKIKHNAGVVVQGVGNLLIRLSRCCNPVPGDAIVGYITKG
                     RGISIHRQDCPNVQAIEPERLIEVDWEDADSQAKNDYNVDIEIYGYNRNGLLNDILQV
                     INSLTSNINGVNAKVDNNKMATLVVTLQIHNINHLQRVVDKIKQIPDVYTVRRLMN"
     gene            complement(9890..10411)
                     /locus_tag="U0290_001283"
     CDS             complement(9890..10411)
                     /locus_tag="U0290_001283"
                     /EC_number="2.4.2.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adenine phosphoribosyltransferase"
                     /protein_id="HEM2301328.1"
                     /translation="MEIKDLQDYVAIVNDWPKKGIVFKDITPLMNDGEAYRFATDKIV
                     EYAKELKIDIIVGPEARGFIIGCPVAYALGIGFAPVRKPGKLPRETIEMEYDLEYGTN
                     KLSMHSDAIKPGQRVLITDDLLATGGTIEATIKLVEELGGIVAGCAFLIELKELEGHK
                     KLNGYDRLILMQL"
     gene            complement(10401..12752)
                     /gene="recJ"
                     /locus_tag="U0290_001284"
     CDS             complement(10401..12752)
                     /gene="recJ"
                     /locus_tag="U0290_001284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded-DNA-specific exonuclease RecJ"
                     /protein_id="HEM2301329.1"
                     /translation="MIHSKYLWNIEEAAEDKASQLAEQLKISLPLAKLLWKRKITTQG
                     QFDKFFHPEKYESYDPFLFAEMDLAVARIKRAIELNEQILVYGDYDADGVTSIAVLMK
                     TLRHLGANAEFYIPNRFTEGYGPNITAFDMAKNQGTDLIITVDNGIAALEVMTHAKEI
                     GLDVIVTDHHEPREVMPEAVAVIHPKHPKSAYPFDELAGVGVAYKLSHALLGEEPKEL
                     LDLVAVGTVADLVSLTDENRLLVQLGLRQLRESANLGLSVLAKKASLKLEEATEETIG
                     FGLAPRLNAVGRLGPADPAADLLLTEDPEEALFLAEEIDDANKERKQIVVDTTKLAME
                     AIEAKETLGNVLVVYGEGWNTGILGIVASKLVGTYSRPAIVLGIDPVTGIAKGSGRSV
                     DAFHLYQALDKHRDLMTAFGGHPMAAGLTLPAENLTELEAKLQEEASFLSEEDFRPAL
                     KIEEKINIADVSVAFIAQLEKLAPFGMDNPKPIFLLENMHLKGTKRIGADKTHLKTML
                     ATEENDATLDSIGFGVGDLVEKISPNAAVDVVGELSINEWNNVKKPQLRMMDIHISHW
                     QLFDVRNKSEWARILQEQTESRVFVCFEERTIGTLGEKNYILVDEKADFTADFQTEEL
                     VFADMPTKTELVETIVRETKPERIFVHFDAAEGNQIPAIPDRLAFAELYSLIKKFQPF
                     PIKKYTPRLMQKFGWNKEQIDFMSKVFFDLEFAKMESGQIIINEVVEKRNLDESLVYQ
                     QKVEEITTRKKLLYSNYTELHSWMESMMETSIYPNAEELENGN"
     gene            complement(12857..13201)
                     /locus_tag="U0290_001285"
     CDS             complement(12857..13201)
                     /locus_tag="U0290_001285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1049 domain-containing protein"
                     /protein_id="HEM2301330.1"
                     /translation="MKENKVQWQVIAGIILALIIAIFAVINVDPVEVNFLFAQAEWPL
                     ILIILGSVLCGCLIIFFLNIAKSRGMKKQVKQLTSEKAELERQLAAAKAMKTHSSKVE
                     TRDTENVVDTTK"
     gene            complement(13299..15563)
                     /gene="secDF"
                     /locus_tag="U0290_001286"
     CDS             complement(13299..15563)
                     /gene="secDF"
                     /locus_tag="U0290_001286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein translocase subunit SecDF"
                     /protein_id="HEM2301331.1"
                     /translation="MVKKSKIVIFFLVVAIIFGAVFGTAKMVMQNINLGLDLQGGFEV
                     LYEVSPADGKGTVSKQTLTDTVTSLDKRINSLGVAEPSIQIEGDNRIRVQLAGVTDQE
                     EARKMLSTTAQLSFRDANDKMMMNGSDLVAGGAKQAFDSSNNPIVTLKLKSADKFASV
                     TKTILAEAPDNQLVIWLDWKEGQKYKTEREKKDPAYLSAPNVSSVLDTDKVEISGSFT
                     TEEAKDLADLLNSGALPVKMKEVYSTSVGAQFGQDALQETILAGIIGVIAIFIFMMAV
                     YRLPGVIACITLVAYTYLVLLILSLLNATLTLPGIAGLILGIGMAVDANVITYERIKE
                     EIKVGRSTKAAFEVGGKEAFRAILDGNLTTLIVAAVLFYFGTSSIKGFATVLIISILV
                     SFLTAVWGSRFLLGLLVKSNWLNNKPGFFAVKRKDIHNLHEGINSFSLKTHFDRFDFV
                     KHHRLFLSIFAAIVIVGIVILSIFRLNLGIDFASGTRAEVTANQTLTETQIKKDLDAI
                     NMPSDDIVFQGSGSKTAVVSYKGTLSQNDVAKFKNYFEDKYKHEPSISTVSPTVGKEL
                     AKNGFWALGVASVLIVLYIAVRFEFYMGIAAILSLLFDAFIIFIFFSVTRLEVDLTFI
                     AAVLTVIGYSINDTIVTADRIRDISMKMQRFKTKEEIANAVNKALRQTFTRSINTILT
                     VIFTVLALVLFGSESILNFSIALLVGLVSSVFSSIFMAMQLWYVFKARQLRKKGPIST
                     VKKKKPRNNGQPVV"
     gene            complement(15664..15954)
                     /locus_tag="U0290_001287"
     CDS             complement(15664..15954)
                     /locus_tag="U0290_001287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="post-transcriptional regulator"
                     /protein_id="HEM2301332.1"
                     /translation="MDTFSEWYEDLAPAISIKVEDFHILGYREIKASHIWAFLTEEKW
                     KNEPTPALHERINDVMQMNIGQLMQFIMTTAEQESNNHVSQADSMLQPNVED"
     gene            complement(16097..16426)
                     /gene="yajC"
                     /locus_tag="U0290_001288"
     CDS             complement(16097..16426)
                     /gene="yajC"
                     /locus_tag="U0290_001288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit YajC"
                     /protein_id="HEM2301333.1"
                     /translation="MGGIVTFIPIILMIVLFYFLLIRPQQKRQKEVQNMQSSLAKGDK
                     IITIGGLHGIVEAIEDGTVILKCGNSKLTFDRNAIRTVLEKGNAVSNPVVAETTSDDT
                     EVVEDNK"
     gene            complement(16460..17599)
                     /gene="tgt"
                     /locus_tag="U0290_001289"
     CDS             complement(16460..17599)
                     /gene="tgt"
                     /locus_tag="U0290_001289"
                     /EC_number="2.4.2.29"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA guanosine(34) transglycosylase Tgt"
                     /protein_id="HEM2301334.1"
                     /translation="MSAIRYELIKTDKQTGARLGKIHTPHGTFDTPMFMPVGTLATVK
                     TMSPEELKAMGAGIILSNTYHLWLRPGEELIREAGGLHKFMNWDQPILTDSGGFQVFS
                     LSKMRDIKEEGVHFRNHLNGDKLFLSPEKAIQIQNALGSDIMMSFDECPPYPASHEYM
                     KKSVERTSRWAERGLKAHVRPEDQGLFGIVQGGAYEDLRAQSAKDLVSLDFPGYSIGG
                     LSVGEPKDVMNRVLEHTTPLLPANKPRYLMGVGSPDSLIDGVIRGVDMFDCVLPTRIA
                     RNGTCMTSSGRLVIKNAKFTHDFRPIDENCDCYTCKNYSRAYIRHLIRCEETFGIRLT
                     TYHNLHFLLNLMKQVRGAIMEDRLADFREEFFEQYGFNRPDAKNF"
     gene            complement(17686..18714)
                     /gene="queA"
                     /locus_tag="U0290_001290"
     CDS             complement(17686..18714)
                     /gene="queA"
                     /locus_tag="U0290_001290"
                     /EC_number="2.4.99.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA preQ1(34) S-adenosylmethionine
                     ribosyltransferase-isomerase QueA"
                     /protein_id="HEM2301335.1"
                     /translation="MKVEDFDFDLPEELIAQTPLLDRTSSRLMVLDKKSGDIKDQHFT
                     DIISYLNEGDALVLNDTRVLPARLHGIKDETGAHIEVLLLKQKEGNAWETLVKPAKRI
                     RKGATITFGDGALKAICLEELEHGGRILEFSYEGIFYEVLEQLGEMPLPPYIKEQLAD
                     QDRYQTVYAKENGSAAAPTAGLHFTEDLLAKISAKGVEIIFVTLHVGLGTFRPVDVED
                     TTNHKMHSEFYRLTEESAERINKIKAQGGKVVAVGTTSIRTLETIASRHDGKLVAESG
                     WTEIFISPGYTFQAVDALITNFHLPKSTLIMLVSALSDRTKILAAYNHAVEEQYRFFS
                     FGDAMFIH"
     gene            complement(18718..19725)
                     /gene="ruvB"
                     /locus_tag="U0290_001291"
     CDS             complement(18718..19725)
                     /gene="ruvB"
                     /locus_tag="U0290_001291"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction branch migration DNA helicase
                     RuvB"
                     /protein_id="HEM2301336.1"
                     /translation="MDERIISSETVDAEEVSFETSLRPQNLSQYIGQDKVKNNLTVFI
                     EAATLRNEALDHVLLYGPPGLGKTTLAMVIAAEMGSQIKTTSGPAIERPGDLATILTS
                     LEPGDVLFIDEIHRLSRAIEEILYPAMEDYCLDIVIGTGPTARSVRLDLPPFTLIGAT
                     TRAGLLSAPLRDRFGVIDHLEFYTEEQLTEIVLRTSNILDTKIDDLGAREIARRSRGT
                     PRIANRLLKRVRDFAQVRGNGTVTEKLAKEALTLLQVDPRGLDTIDQKLLHTIIQSFR
                     GGPVGLDTIAASIGEERETIEDMQEPYLLQIGFLQRTPRGRIATETAYNHLGISYEKE
                     V"
     gene            complement(19741..>20287)
                     /gene="ruvA"
                     /locus_tag="U0290_001292"
     CDS             complement(19741..>20287)
                     /gene="ruvA"
                     /locus_tag="U0290_001292"
                     /EC_number="3.6.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Holliday junction branch migration protein RuvA"
                     /protein_id="HEM2301337.1"
                     /translation="AGQIGYQIITGNPFSFQRLEGTEAQVFLYQHVREDNISLFGFQT
                     TEERYLFKKLLSVSGIGPKSALAIIASGDVVPLISAIESEDDVYLTKFPSVGKKTARQ
                     IILDLKGKLADVVASEIVYVAPENDMVAGLSPQLEEAVLALEALGYSTRELKKVIPKL
                     SKEEDLTSDAYIKLALQLMTK"
BASE COUNT         5866 a         4247 c         3554 g         6620 t
ORIGIN      
        1 acaaaaagga gagttgagta tggaatcagt atttatgttc ttttgtactt tattggtttg
       61 gttaatgaca ccaggtattg cattatttta cggtgggatg gttcgacgca aaaatgtgtt
      121 gagtacggcc atgtatagtt ttagttcgat ggcaattgta tctatccttt gggtgatagt
      181 tgggtattca ttagctttcg cccctggaaa cggctttata ggaagttttg actggacctt
      241 cctccataat gttggcttcg cagcaaacga tacttactca gatgctattc cacatattct
      301 attcatgatg tttcaaatga ctttcgcaat tttgactgta gctatcattt ctggggcatt
      361 tgcagaaaga atgaatttct ccgcttattt gattttcatt atcttatggt cgttacttgt
      421 ttattcccct gttgctcact gggtttgggg tgacggtggt tggttacgta atctcggcgc
      481 acttgatttc gccggtggga atgttgttca tattagttca ggtgtaacag gattagtcct
      541 tgcaattatg attggacgta gaaaagaagc cgattctgct tcacctcata atttaccttt
      601 agcgcttatt ggtggtattc tagtttggtt tggttggtat ggttttaatg ttggtagcgc
      661 ccttacaatt gataatgtgg ctatgatagc ttttgttaat acgaatacag ctgctgctgc
      721 aggtattatc ggttggggtt tggttgaatg gttgacgaat aaaaagccaa ctatgcttgg
      781 aaccatttcc ggagcaattg ctggtttagt atccattacc cctgccgctg gatttgttac
      841 cgttccaagt tcacttatca ttggtttcct cggcggagca ctatgcttct gggctgtgtt
      901 ctggttgaaa ggaaaagtaa aatatgatga tgcacttgat gcattcggac ttcatggaat
      961 cggaggtatt tggggtggta tcgcaaccgg ccttttcgcc acaacaaaag taaatgaagc
     1021 tggagcagac ggattattct acggcaatgc ttctctcgta gtaaaacaat taatcgccat
     1081 tggttcaacg gtagcatatg tggctatagc gacagcaata atcgtcgtaa ttatcaaact
     1141 atttttacca atccgtgtaa acgaagaaca agaatataaa ggacttgatt tgacgctgca
     1201 cggcgaaaaa gcatatcaag aataaaggag gcaacaatat gtctggatta acaaaaatcg
     1261 aaatcattac tcgcccaaac cgctttcact tgtttcaaaa agagcttgcg aaaatcggcg
     1321 tgagcggctt aactgtcaca aaagcactcg gtacagggtt agaaaaagga tttatcgaac
     1381 tttatcgcgg tacaaaaaaa gaaagcaata ttcatgaacg aatgaaaatt gaaatcgttg
     1441 tttccactgt cccggttgag gatgtacttc gtgtcgttaa agaaacgcta cgtactggcg
     1501 aacccggcga cggaaaagta tttatttacc cacttgcaga agtcgttaaa atcagcactg
     1561 gcgaaaccgg aatcgacgca ttacaagata aaccatcaaa atgaatagtt aaaatggtga
     1621 attaattaaa aatggggcct ctattctaaa aaatcaatga gaaatggcgt ttaccccttc
     1681 cgcttcttag cttttacact tataatgaaa aaggaagaac gtttagaaca gataaggagg
     1741 cgcgaaattc cctatgcgta aaatccccat tttcaccgtt ctagtagcta tcctgctttt
     1801 tggcggttat tatctttatc aacacgcttc gtcaaaagta gacgttacct ttaatttcgt
     1861 ggtggaccaa aaatcaaaaa acaataccat cactggcaaa attgatggcg ctggaaacaa
     1921 atcaattaca ctaccacttt ctgaagagag ttgggatgca gtaaaaaaag ggaatcgcta
     1981 caatgtggaa gccacttttt ataataaaaa taaaatcagc tccagtgaag cgaaagaatt
     2041 ggacggccca ttctggtcca atgattccaa tcgagggtta ttagttaata aagtacacgt
     2101 tgaaaacatt caagaattaa gtgatgattt ttaaaacgaa aagaaggtga gcatttgcgc
     2161 tcaccttctt tttttagttt gtttcttttt tcactgtctc gagtttcaac tctgctagct
     2221 gtgcttcact cacttcacct ggtgcatttg ttagcggatc cactgcacta cctgttttag
     2281 ggaatgctat tgtgtcacgc aagttatttc ggccagctaa gatcataacg atacgatcta
     2341 atccaagcgc gataccacca tgaggcggtg taccatattc taacgcatcc attaggaagc
     2401 caaattgttc tttcgctgat tcatccgtaa agccaagtgc acggaacatc gattcttgca
     2461 cttctttttt ataaatccgt aatgaacctc cgccgatttc atatccattt aatacgatat
     2521 cataagcttc tgccattact ttagaagagt ccgtttcaag aagtggaata tcttcttctt
     2581 ttggtaaagt gaatggatga tgcgcagata catagcgccc tgcttcttca tcatattcaa
     2641 ataacggcca atcagtcacc cataagaaag caagttcttc ttcattgatt aagtttaact
     2701 ctttaccaag tttattacga agcgccccca gtgatgctgc aacgatatct gctttatcag
     2761 ctgcaaatag taataaatcg ccatcttctg cttgtagaga tgcttttagt tctgttgctt
     2821 tttcttcagg gaagaattta gcaatcgggc ctttcagttc accagcctct acttttaacc
     2881 aagcaagacc ttttgccccg tagttagcaa caaaaacacc tagtgcatct aaatctttgc
     2941 gtgaaaaatt agctgcggct gcttttgcat tgattgcttt cacttctcca ccattttcga
     3001 ttgcggattg gaaaacttta aaatcaacat cttttacgac atcggataca ttttgtaatt
     3061 ctaaaccaaa acgaatatcc ggtttatcac tgccaaaacg atccattgct tctttatatg
     3121 tcatacgagg aaacggtttg tcgatagtaa tatttttcgc ttctttcact acatctacta
     3181 acatatcttc cgtaatcgct tggatttctt ctttcgttaa aaagctagtc tctaaatcga
     3241 tttgtgtaaa ttcaggttga cggtcaccgc gcaaatcctc atcgcggaag caacgtacga
     3301 tttggtaata tttatcaaac ccagcagtca ttagtaactg ttttaaaatt tgcggagatt
     3361 gtggcaatgc atagaagtta ccagggtaaa cacgacttgg tacaagataa tcgcgtgcac
     3421 cttctggcgt acttttcgtt aaataaggtg tttcaatatc aaagaatccg agtgcatcca
     3481 gcttattgcg gaacgttctc gttaccgtgt gacgcatttt gaaaatgttg ttcatttccg
     3541 ggcgtcgtaa gtctaaataa cggtatttca aacgcaattc atccgaaaca ttcacaccat
     3601 cttcaatata aaatggtggt gttttagacg aatttaaaat ggtaatttct tctgctaaaa
     3661 cttctacttt accagttgct aatttttcat tgatagcttt ttcaccacga gcatggactg
     3721 tccctttaat agtaacaaca aattcatttc gaacactatc agcgatttca agcgcttctt
     3781 tcgaaaattc aggattgaaa acaacttgga caattccttc gcgatcacgt aaatcaataa
     3841 aaattaaacc acctaagtcg cgtctttttt gcacccaccc atgaaggaca acactttgac
     3901 caatatgcgc ttcgtttaat tcaccgcagt aacttgtacg tttttccatt ttaattctcc
     3961 cccttggtgt ttattaattt ttctagtata gttgtttcag acacagcttc ttgctcgcct
     4021 gtttccatat ttttcaattg ataattgcct gtttgtaatt cttcttcacc aagaataatg
     4081 gtatatacgg cattttttct attggcgtct tttagttgtg ctttgaattt acgttttaag
     4141 taatcttttt ctgcactaat gccgttttgt cttaatttat ttacgagtgt tacggctttt
     4201 agttctgctt ccggttgcgc tgtaatcaca taaacctcta acggtttttt cgcaggtatt
     4261 ttgatgtccg ctttttctag cgccagtaaa atacgttcca caccaatacc aaagcccatt
     4321 cctggtgtat ctgggccacc aaactctctc actaaaccgt gatatcttcc gccaccacaa
     4381 agcgttgttt tcgcgccaaa tccttcttct acgctcataa tttcaaatgt cgtatggtta
     4441 taataatcta aaccacgaac catcgttgaa tcaatttcaa acggaatctc tagcgcattt
     4501 aagtattttt ttacattttc aaaataggca acagattctt catttaaaaa gtccagaata
     4561 gatggtgccg attgaattag tggattgtca tgatcttttt tacagtctaa aatacgcagt
     4621 ggatttttgt gtaaccgcac ttggcattcc gcacaaaatt catcaatatg tggttcaaaa
     4681 tgcgcaacca gggcttcccg gtgttttaga cgactttctt tatcaccaag actattaatg
     4741 accaatttaa tatttattag accaattttt ctgaaaaact ccattgctag tgaaattact
     4801 tctacatcaa tagaaggatc atcacttcca agcgcctcaa tgcccatttg agtaaactgg
     4861 cgttgtcttc cgccttgtgg acgttcataa cgaaacattg gctcattata atacattttg
     4921 attggttggc ttacttcgcc gtataattta tgctcaacaa aagcacgaac aacagaagcg
     4981 gtcccctctg gtctcagcgt taaacttctg ccacccttat cttggaaagt gtacatttct
     5041 tttgatacga tatcggtgga atcaccaacc ccgcgttcaa ataattctgt atgttcaaaa
     5101 acaggtgttc taatttcttc atattgatag ttctcacaca cttttttaaa ctctgtctct
     5161 aaaaaatgcc atttactaac ctcttctggc aaaatatctc gtgtccctct cggtaattgc
     5221 aaatccatca ccataagcct cctttttcac ttcaaaatat aaagaaaaac ccccgtcact
     5281 tgttataaaa aacaagggac gagagtttgt ttacacccgt ggtaccaccc taattagaac
     5341 tactaatgag tcctcactta agtcagttaa cgcctgaata cgttcttgct tactgttttc
     5401 aacaagaaac ctcgagagtg tcttttcaga aaatgtgact atctttatcc tttcagccaa
     5461 atgggataaa ttctctgtat agcatggatt tccttacttt tctctgtcgc tagttttaaa
     5521 tatgaattat tctaagatta ctaaaaacac actgaaaagt caacattttg ccagtttttt
     5581 tataaaaaac cactttctag ttccatgaaa gcgcatttta tggtaacatt ttactgtcag
     5641 ataaaagttt atgagtatat gggtggtgtt agctttaaat gaagaataaa ttcattttta
     5701 tcaccgttgt ctccatttta ttgattgcag caggtatttt tacaaccata gcaatggcga
     5761 acgcgaattc cgtagtcgtc aaagcagaag tcttgaatgt ccgcagcggt cctggtttag
     5821 catatgatgt aacgagccaa gccagaaaaa atgaagtact ccgggtagtc ggtgaagaaa
     5881 atcaatggta caaagttcag ttagataacg gaaatagcgg ttgggttgca agctggttag
     5941 tagaaaacac tgatgtcagc gcagcaagta acagtgtcgc tatcgtttct tctgacggcg
     6001 gtttgaatgt acgtgaaaaa ccaagtacct caagtaaagc acttggattg ctaaataatg
     6061 gtgatcaagt aacagttact agccaacaaa acggctgggc gcaaatccaa tataacggta
     6121 caagcgcatg ggttagctcc gattacttaa cgattcgtga atctgttaca aaagtagatg
     6181 aaagcgagct acaaacagta accattcgcg atgactccac taatattaga aataagccaa
     6241 gtcgtgatgg cgccgtcatc gaaaaagcaa attctggtca agggttcgct attcaaggag
     6301 tacaaggtga ctggtataag atacgtacga caagcggcga agaaggttat gtagctaact
     6361 gggtagtcga tgtttctgac aaaggtcaaa catccagccc tcgaagcaaa acaaccaaat
     6421 tatccgaagc aaccatcgtt attgaccccg gacacggtgg caacgatccg ggcgctaaag
     6481 ggtcaaatgg cacaattgaa aaagaaatga ctttgaagac agcaaaacaa ttaaaacaaa
     6541 aattagaagc tagaggcgct aaagtaatcc taacgagaaa cagtgataaa tatgtctctc
     6601 taaaaggaag aacaaatata gctgccgaaa ataatgcaga tgtgtttatt agtattcact
     6661 ttgatagctt agaagacgcg agcaaagggg taagcgggca aacaacttat tattatgata
     6721 atagtgataa atcgcttgct gaaagtatta atactacgct cgggaaagac ctccctacta
     6781 ctaatcgtgg tgcaagagtc ggcgattatt atgtagtcag agaaaattct caaccagcag
     6841 tccttctaga acttggttat ctaagttctg caaaagatga aagtaatatc aactcagcat
     6901 catacagaag ccaaatcgct gaatcagtaa cagatgggct atctaattac ttctctaatt
     6961 aaaaaaaaca atcattcagg agactgaatg attgtttttt tatttacgca tttcatctga
     7021 atcgagcatt attgttactg gaccgtgatt gacaattttc acatccatca ttgcgccaaa
     7081 tactccagtt tcaacaataa aacccgcttc tgtaagtttt tgattaaata agtcatacag
     7141 tgtttctgct ttttctgctg gggcggattt tgtaaagctt ggacgttttc ctctacttac
     7201 atcagcgtat aaagcgaact gggaaacgct aagaatcgcg ccgcctcgtt ctgctaaaga
     7261 aatattcatc ttctcggatt catcttcaaa aattcgtaat ccaacgattt tttttgccat
     7321 atagtccacg gtttctgggg tatctttatg ggtgaatcca actaataaac aaagacctcc
     7381 agctatttcg ctaatgactt cctcctccac actcacggaa gcttcataac accgttgcag
     7441 tagtacacgc atcgcttctc cactccttta gttcattaat cttctcactg tataaacatc
     7501 tggaatttgt tttattttat ccactacgcg ttgtaaatga ttaatattat gaatctgtag
     7561 cgtgaccact aatgttgcca tcttgttgtt atcaacctta gcattgacgc cgttaatatt
     7621 ggaagttaga ctgttaatca cttgtagaat atcatttagc aaaccgttac gattatagcc
     7681 ataaatttcg atgtctacat tatagtcatt tttcgcttgt gaatcagcat cttcccagtc
     7741 cacttcgatc agccgctctg gttcaatagc ttgaacattt gggcaatctt gacgatgtat
     7801 agaaatgcct cgaccttttg taatataacc aacgatagca tcaccaggca ctggattaca
     7861 acatctggat agtcgaatca atagattacc tactccttga acaactactc ctgcattatg
     7921 cttaatcttc agtttctcat tgttagcatc tgaattcgaa ggtttatttt ctgattgcgt
     7981 caataacttc tctgtttctg cttctaattc acgttctttt cgaagttttt ctgttaagcg
     8041 gttagctact tgtaaagctg taatgccatt ataaccaaca gctgcaaaca aatcatcttc
     8101 atgcgaaaaa tttagtttat cagctaattt acgaagattt tctggcgtca taattttttt
     8161 cgattcgaat ccaagttgtc taatttcttt ctcaactaaa tcgcgacctt tttcgacatt
     8221 ctcttctttt gcttgtcgtt tgaaaaattg tttaatttta tttcgcgctt gcgaagtttg
     8281 aactaattta agccagtcgc gacttgggcc gtaagaatgt ttggacgtta aaatatcaat
     8341 aatatcgccc gtttttaatt tatagtcgag tgtcacaatt tttccgttaa ttttagcccc
     8401 gattgttttg tttccgattt cggtatggac acggtaagca aaatcgagtg gtacagagcc
     8461 atttggtaac tcgtacacat cgccttttgg agtaaatacg taaacaacat ccgaaaataa
     8521 gtcgagtttc aagctttcca taaactcttc cgcattatcc gattcatttt gatattctaa
     8581 aatttctcgg aaccatgtta atttattatc gaatgaagtt ttggaattaa ccactttgcc
     8641 ttctttatag gcccagtgtg ccgcaacccc gtattcagcg atttggtgca tttcgtgcgt
     8701 tctaatttga acttcaagcg gttctccttg aggccctata accgtcgtgt gaatcgattg
     8761 atacatattc gacttcggca tcgcaatata atctttaaag cgacctggca tcggtttcca
     8821 gcgcgtatga ataataccaa gaacagcata gcaatccttg atactactaa cgacaattcg
     8881 aacagccaac aaatcataaa tttcgttaaa ttgtttattt tgttcgctca ttttccggta
     8941 aatcgaataa atatgttttg gtcttccaga aatatccgct tgaatattga gttcatctag
     9001 attttcattc acaccgtcaa tcacatcatg caaataacgc tctcttgcat cccgcttttg
     9061 tttcattaag tggacgatgc gataatattg ttgtggattt aaataacgca gcgctgtatc
     9121 ttccagctcc catttcactc gcgaaatacc caagcgatgt gcaagtggcg caaaaatttc
     9181 taatgtttcg ttcgcaattc tacgttgttt ttccacgggc aaatgtttta atgtccgcat
     9241 attatgcaaa cggtccgcca gtttgattaa aataacgcga atatcctgcg ccatcgcaat
     9301 gaacattttc cgatgatttt cagcttgttg ctcttcgtgt gatttatatt taattttacc
     9361 aagtttcgtt actccgtcta ctagcatggc aacttcactg ccaaaaactt cttctaaatc
     9421 cgctagtgtg actggcgtat cttccacgac atcatgtaaa aatccagatg caacggtcga
     9481 tggatccatt tttaattcga ctaaaatgcc ggcaacttga attggatgaa taatatacgg
     9541 ctcacctgat ttacgaaatt gctctttatg agaatcgcgc gcaaattcat acgctttttt
     9601 tacgagcgct agatgttcct gattcatata atgagaagcc atatcgatga cctgctcagc
     9661 tgtcagattt tgttctttcg ccatttacat tcaccctctt atctccatgt catatataca
     9721 acttaaaaac acccaaaaac tgagtgttct aaaaaatatt cttgtttaat attatagcat
     9781 gagccgtctt tgtttagaaa gcacttttcc ttgatttttc acattttctg gcagttttca
     9841 gctttttaat caaaaaacta cccctaaaat aataggagta gtttgatttt tataattgca
     9901 taaggattaa acggtcgtaa ccatttaatt ttttatgtcc ttctagctct tttagttcga
     9961 ttaagaaagc acaaccagca acaataccgc ctaattcttc tacaagtttg atagttgctt
    10021 cgattgttcc accagttgca agtaaatcat ctgtaattaa aacgcgttgc cccggtttaa
    10081 tcgcatcact atgcatagat aatttattcg taccatattc taaatcgtat tccatttcga
    10141 ttgtttcacg aggaagtttt cctggtttac gaacaggcgc aaaaccaatt cctaacgcat
    10201 aagcaactgg gcagccaata ataaagccac gtgcttctgg tccaacaata atatcaattt
    10261 ttaattcttt tgcgtattcc acaattttat ctgtagcaaa acgatatgct tctccgtcat
    10321 tcataagggg tgtgatgtct ttaaatacaa tccctttttt gggccaatcg ttcacaatcg
    10381 ctacataatc ttgtaaatct ttaatttcca ttttctagtt cctccgcatt cgggtaaatt
    10441 gatgtttcca tcattgattc catccaacta tgaagttccg tatagttaga gtacaacagt
    10501 ttttttcttg tagttatttc ttctaccttt tgttgataaa caagtgattc gtccagatta
    10561 cgtttttcaa caacttcatt aataataatc tgaccacttt ccattttagc aaattctaaa
    10621 tcaaaaaaca cctttgacat gaaatctatt tgctctttat tccagccaaa cttttgcatt
    10681 agccgtggtg tgtacttttt aattggaaat ggttggaatt ttttgatgag actatacagc
    10741 tcagcaaagg ctaaccggtc tggaattgct ggaatttgat tcccctctgc tgcatcaaaa
    10801 tggacaaaaa tacgctctgg tttcgtttca cgaacaatcg tttccactaa ttcagtcttc
    10861 gttggcatat ccgcaaaaac aagttcttct gtctggaaat ccgccgtaaa atcagctttt
    10921 tcatccacta aaatatagtt tttttctcca agcgtgccaa tcgttctttc ttcaaaacaa
    10981 acaaaaactc ttgattctgt ttgttcttgg agaatcctag cccactcaga tttattacgt
    11041 acatcgaaaa gttgccaatg cgagatgtga atgtccatca tgcgtagttg tggttttttc
    11101 acattattcc attcattgat ggataattcc ccaaccacgt ccacggctgc atttggagaa
    11161 attttttcta ccaaatcgcc tacaccaaat ccgatagaat ctaaagtggc atcattttcc
    11221 tctgtagcaa gcattgtttt taaatgggtt ttatctgccc caattctttt cgttcctttt
    11281 aaatgcatat tttctaacaa gaaaattggt ttagggttat ccattccaaa aggagctaat
    11341 ttttcaagtt gagcaataaa tgctacggaa acatccgcaa tatttatttt ctcttctatt
    11401 ttcaaggctg ggcggaaatc ttcttcagaa agaaaactcg cttcttcttg taatttagct
    11461 tctaattctg ttagattttc agcgggcaat gtaagacccg cagccattgg atgcccacca
    11521 aatgcagtca ttaaatcacg atgtttatca agcgcttgat acaaatgaaa tgcatcgacg
    11581 cttcgaccag atcctttggc aattccagta actggatcaa ttcctagtac aatcgccgga
    11641 cgagaatatg ttccaactaa tttagaagca actatcccta aaatccctgt attccaaccc
    11701 tctccgtaaa caacgagcac atttcctaat gtttcttttg cctcaattgc ctccatcgcg
    11761 agcttcgttg tatcaacaac tatttgttta cgttctttat tcgcatcatc aatttcttct
    11821 gctaagaaaa gtgcttcttc tggatcctct gttaaaagta aatccgccgc tggatctgct
    11881 gggcctaaac gaccaacagc attcagtcgt ggagctaaac caaagccaat agtttcttcc
    11941 gtagcctctt ctaacttcaa actagctttt ttagctaaca ctgaaagtcc aaggttcgcg
    12001 gattcgcgca attggcgcaa tccaagttgg acaagtaagc gattttcatc tgttaaagaa
    12061 actaaatctg ccaccgttcc aactgcaact aaatcaagca attctttcgg ttcttctcca
    12121 agtaatgcat gcgataactt ataagcaaca cccacacccg ctaattcatc aaaaggataa
    12181 gctgacttag gatgcttcgg atgaattact gcaacagctt ccggcataac ttcccgtggt
    12241 tcatggtgat ccgtcacaat aacatctaaa ccaatctctt tggcatgcgt cattacttca
    12301 agcgccgcaa taccattatc aaccgtaata attaaatccg ttccttggtt tttagccata
    12361 tcaaaagcag tgatatttgg accataacct tccgtaaaac gattaggaat ataaaattca
    12421 gcatttgctc ctaaatgccg cagtgttttc attaaaacgg caatactagt aactccatct
    12481 gcatcataat ctccgtaaac taaaatctgc tcatttagtt ctatcgctcg cttaattcta
    12541 gcaaccgcaa gatccatttc agcaaataaa aatgggtcat agctttcata tttttctggg
    12601 tggaaaaatt tatcgaattg tccttgcgtt gtaatttttc ttttccaaag tagttttgca
    12661 agtggaagcg aaatttttag ctgttctgct aattggcttg ctttgtcttc cgccgcttcc
    12721 tcgatattcc ataagtattt tgaatgaatc acattacccc acctctcaac cttcctatta
    12781 tatcgaaaat cactagaaaa accaagagga atcttctaac aaaaaacgcc aacatatttt
    12841 gtcagcgtcc cattttttat ttagttgtgt ctaccacatt ttctgtatca cgtgtttcta
    12901 ctttagatga atgagttttc attgctttag cagctgctag ttggcgttct aattctgctt
    12961 tttcggatgt taattgtttt acttgtttct tcattccacg cgatttcgcg atatttaaga
    13021 aaaagataat taaacaacca caaagaacag agcctaaaat aattaaaatt aatggccact
    13081 ccgcttgcgc aaataaaaag tttacttcta ctggatctac attaataact gcaaaaatag
    13141 caataatgag tgctaaaata atccccgcaa ttacttgcca ctgtacttta ttttctttca
    13201 tgttttttct cctccttgca caattatctt attatttacc cgtttctagg ctattaaaaa
    13261 cgaccgaatc tctttttatg aaattcggcc gttcgttttt atacgacagg ttgcccgtta
    13321 ttacgtggtt ttttcttttt aactgtgcta attgggcctt tttttcgtag ttgtcgtgct
    13381 ttgaatacgt accacaattg cattgccata aagatggagg agaatacact cgaaacaagt
    13441 ccaacaagta aggcgatgga gaagttcaga atagactcac taccaaatag tacaagtgcc
    13501 agtacggtga aaataaccgt taaaatggta ttaattgaac gagtgaatgt ttggcgtaat
    13561 gctttattaa ccgcattcgc aatttcttct ttcgttttga aacgttgcat cttcatacta
    13621 atatcccgta tccggtcggc ggtgactatc gtgtcattaa tggaataacc gataaccgtc
    13681 agcaccgcgg caatgaaggt taagtcaacc tccagccttg ttacactgaa gaatatgaag
    13741 atgataaatg cgtcgaatag taaggacaga atcgccgcaa tacccatata aaattcaaac
    13801 cggactgcaa tataaagtac aatcagcaca gacgccacac cgagtgccca gaagccattt
    13861 ttggcaagtt ctttaccgac agttggtgaa acggtactaa tgcttggttc gtgcttatac
    13921 ttgtcctcaa aatagttttt aaatttagct acatcatttt gtgataatgt ccctttataa
    13981 gaaacaacgg ctgttttaga ccctgatcct tggaaaacaa tatcatccga tggcatatta
    14041 atcgcatcta aatctttctt aatttgcgtt tctgtcagcg tttgattagc tgttacttcc
    14101 gctcgtgtcc cactggcaaa gtcaatacct agatttagcc taaatatgga gagaataaca
    14161 ataccgacaa taacaattgc agcaaaaata gataagaaca gacgatgatg ttttacaaaa
    14221 tcaaagcgat caaagtgtgt ttttaagcta aagctattaa ttccctcatg taaattatga
    14281 atatcttttc gtttaactgc aaagaatcct ggtttattgt taagccaatt acttttcact
    14341 aataagccta ataagaatct tgatccccaa acggctgtca agaagctgac taaaatacta
    14401 atgattagaa ccgtagcaaa acctttgatg gagcttgttc caaagtagaa gagaaccgca
    14461 gctacgataa gtgtcgtcaa gttaccatct aaaatcgcac ggaatgcttc tttaccgccg
    14521 acctcaaaag ccgctttcgt cgacctaccg actttgattt cttcttttat ccgctcgtag
    14581 gttattacgt tcgcgtcaac agccatacct atccccagaa tcaaacctgc aatccctggt
    14641 aaagtaagtg ttgcgttaag cagactcagt attaatagta ctaaataagt gtatgcaact
    14701 aaagtgatac aagcaataac gcctggtaaa cggtaaactg ccatcatgaa aataaagata
    14761 gcaatgaccc caataatacc agctaaaatt gtttcttgta acgcatcttg cccaaattga
    14821 gcaccaacag atgtcgagta aacttctttc attttaacag ggagtgcacc agagtttagc
    14881 aaatcagcta aatcttttgc ttcttccgtt gtgaaacttc cggaaatttc tactttatct
    14941 gtatcaagca cgctactaac gtttggtgct gataagtaag ctgggtcttt cttctcgcgt
    15001 tctgttttgt atttttgtcc ttctttccaa tctaaccaaa taactaattg attgtcaggc
    15061 gcttccgcta gtattgtttt tgttacacta gcaaatttat ctgcactttt tagttttagc
    15121 gtaacgattg ggttgttgct tgaatcgaaa gcttgtttgg caccgcccgc aactaagtca
    15181 ctaccattca tcatcatctt gtcatttgca tctctaaatg ataattgggc tgtggttgat
    15241 agcatttttc gtgcttcttc ctgatcagtt accccagcaa gttgaacacg aatacggtta
    15301 tccccttcga tttgaatact tggttcagct acacctaatg aattgatacg cttgtcgagt
    15361 gaagttaccg tatctgtcaa tgtttgtttg gatacagttc ctttgccatc agctggtgaa
    15421 acttcatata gaacttcgaa tcccccttga agatccaagc ctaggttgat gttttgcata
    15481 accatttttg cggtaccaaa tacagcacca aagataattg caactactag aaagaaaata
    15541 actatcttac tcttttttac catttctgtt tcgttcctcc ctcatctaaa ccataacaaa
    15601 tcccagtcta acaacaaata cttctatttt atgtatgaaa cccaagcatt tgctaacagg
    15661 ctgttaatct tccacatttg gttgaagcat actatctgct tgagaaacat ggttattaga
    15721 ttcttgttca gctgttgtca taataaattg cattaattgt ccaatattca tttgcataac
    15781 atcatttata cgttcatgca aagcaggggt tggttcattc ttccactttt cttctgttaa
    15841 aaatgcccaa atgtggcttg ccttgatttc tcggtaacct aaaatatgaa aatcttccac
    15901 ttttattgaa atcgctggcg ctaaatcttc ataccattcc gaaaatgtat ccatatcaag
    15961 tcgtcccctt tcttaaacaa taagcatatt cccattttat ctaaaaaaag cttaaatggg
    16021 aagtataagc tctattttta tggttaaaaa atgccatttc accgtttaaa gggaaatggc
    16081 atttttattt caagtattat ttgttgtctt ctacaacttc agtgtcatca gaagttgttt
    16141 ctgctacaac tggattagaa actgcattac ctttttcaag tacagttctg attgcgttac
    16201 ggtcaaaagt taatttgctg tttccgcatt tcaaaatgac tgtgccatct tcaattgctt
    16261 caacaatacc gtgaagtcca ccaatagtaa taattttatc accttttgct aaactacttt
    16321 gcatattttg tacttctttt tgacgttttt gttgaggtct gattaataag aagtaaaaca
    16381 aaacgatcat caagataatt ggtataaatg ttacaatacc gcccatattt tccaactcct
    16441 ttcgatactt tatatatatt tagaaatttt ttgcatcagg acgattgaat ccatattgct
    16501 caaaaaattc ttccctaaaa tcagcaagac gatcttccat aatagcgcca cgaacttgct
    16561 tcattaagtt taacagaaaa tgaagattat gataagttgt aagtcgaatt ccaaatgttt
    16621 cctcacaacg aatcaagtgt cgaatgtatg cacgtgagta atttttacaa gtataacagt
    16681 cacaattttc atcaattgga cggaaatcat gggtaaactt agcattttta ataactaagc
    16741 gaccactaga tgtcatacaa gtaccatttc gtgcaatacg tgtgggaaga acacagtcaa
    16801 acatgtccac tcctcgaatt acgccatcaa tcaatgagtc aggcgaacct actcccatta
    16861 gataacgtgg tttattagct ggtagtagtg gtgtcgtgtg ttccaaaacg cgattcatca
    16921 cgtcttttgg ttcaccaaca gacaatccac caattgagta tccagggaaa tctagagata
    16981 ccagatcttt cgcactttgc gcacgtaaat cttcgtaagc tccaccttgg acgataccga
    17041 acaaaccttg gtcttctggt ctaacgtgcg cttttaagcc acgttcagcc cagcgagatg
    17101 ttctttctac tgatttcttc atatattcat gcgacgctgg atatggtgga cattcgtcaa
    17161 aactcatcat gatgtcagat ccaagcgcat tttgaatttg aatcgctttt tctggtgata
    17221 ggaaaagttt gtctccgttt aaatggttac ggaaatgaac gccttcttct ttgatatcac
    17281 gcattttact caaactaaac acctgaaaac cacctgaatc cgttaagatt ggttgatccc
    17341 agttcataaa tttatgtagt ccgcccgctt ctcggataag ttcttctcca ggacgcaacc
    17401 ataaatgata cgtattgctt aaaataatac ctgcacccat ggcttttaat tcttcgggtg
    17461 acattgtttt taccgtcgca agcgtgccaa ctggcataaa cataggtgta tcaaatgtgc
    17521 cgtgcggtgt atggatttta ccaagacgag cacctgtttg tttatctgtt ttaattagtt
    17581 cataacgaat ggcagacatg tgttacctct ttcttattta ctctattcac tagcataacg
    17641 aaaattacca atgaaaacaa gcttttctat taattttttc gcaatttaat gaataaacat
    17701 ggcatcgcca aaactaaaga agcgatattg ttcttctaca gcatgattat aggctgctaa
    17761 aattttcgtg cggtccgata aagcagacac gagcataatt aatgttgatt ttggtaaatg
    17821 gaaattcgtt attagtgcat ctactgcctg aaaagtatac cctggggaaa tgaagatctc
    17881 tgtccaacct gattcagcca ctagtttgcc gtcatgacga ctcgcaattg tttctaatgt
    17941 tcggatagaa gtcgttccaa ctgcaacaac ttttccgcct tgtgctttga ttttattaat
    18001 tcgctcagca gattcttctg ttaaacgata aaattcagaa tgcattttat gattggtagt
    18061 atcttctacg tccactgggc ggaatgttcc gagccctaca tgaagcgtca cgaaaatgat
    18121 ttctacacct tttgcgctaa ttttcgccag taaatcttct gtaaaatgaa ggcccgctgt
    18181 cggcgctgct gctgaaccat tctctttcgc atagacggtt tgataacgat cctgatcagc
    18241 aagttgttct ttaatgtatg gtggaagtgg catctcgcca agttgttcta aaacttcata
    18301 aaaaatgcct tcataagaaa attctaaaat ccgaccacca tgctcgagct cttccaagca
    18361 aatcgctttt aaagcaccat caccaaaagt aatggtagca ccttttcgaa ttcttttggc
    18421 aggttttact aaagtttccc atgcattgcc ttctttttgt ttcaaaagga gcacttcaat
    18481 gtgcgcgcca gtttcatctt taataccatg cagccttgct gggagaacac gtgtgtcatt
    18541 taatactagt gcatcccctt cgtttaaata gctgataata tcagtgaaat gttggtcttt
    18601 tatgtcacct gactttttat caagcaccat tagccggctt gaagtccggt ctaatagtgg
    18661 ggtttgtgcg attaattctt ctggtaaatc aaaatcgaaa tcttctactt tcatgcttta
    18721 tacctctttt tcataactta ttcctaaatg gttatacgcc gtttcagttg cgattcttcc
    18781 gcgcggcgtc ctttgtagaa aaccgatttg tagtaaatat ggttcttgca tatcttcaat
    18841 ggtttctcgt tcttctccaa tacttgcagc gattgtatcc agtccaactg gaccgcctct
    18901 aaatgattgg ataattgtgt ggagcaattt ttggtcaatg gtatctaatc ctcttggatc
    18961 tacttgaagc aaagtaagtg cttctttcgc tagcttttct gttaccgttc cgtttcctcg
    19021 aacttgcgcg aaatcacgta cccgttttaa taaacgattg gcaatccgtg gggttcctct
    19081 tgaacgtcta gctatttcac gtgcaccaag atcatcaatc tttgtatcta atatattcga
    19141 agttctgagt acaatttctg ttaactgctc ttctgtataa aattccaagt ggtcaattac
    19201 gccaaaacga tctctgagtg gtgccgataa aagtcccgct cgtgtggtag ctccaatcaa
    19261 tgtaaatggt ggtaagtcta gacgaacaga gcgcgcagtt ggacctgttc caatcacaat
    19321 atccaaacaa taatcttcca ttgccggata taaaatttct tcaatcgctc tcgataaacg
    19381 atggatttca tcaataaata aaacatcccc tggctcaagg cttgttaaaa ttgtcgccaa
    19441 gtcacctggt cgttcaattg ctggtccact cgttgtttta atttgactcc ccatttcagc
    19501 tgcaataacc attgcaagcg ttgttttacc aagccctgga ggtccgtata aaagcacgtg
    19561 atccaaggct tcattccgga gtgtggcagc ttctataaaa actgttaaat tattctttac
    19621 tttgtcttgc ccaatatatt gtgaaaggtt ctgtggccgc aaactagttt caaaagatac
    19681 ttcttctgcg tctaccgttt cacttgaaat aattcgttca tccatgccac aagctcctct
    19741 ctattttgtc attaattgta gtgctagctt gatatatgcg tcgcttgtta ggtcttcttc
    19801 ttttgacaat tttggtatta ctttttttag ttctcgcgtg ctataaccga gcgcttctaa
    19861 agctaataca gcttcttcta attgcggaga aagtccagca accatatcgt tttctggagc
    19921 aacataaaca atttcgctcg cgacaacatc agctagtttg cctttcaaat caagaatgat
    19981 ttggcgtgct gtttttttac caacgcttgg aaatttggtt aaataaacat cgtcttcgga
    20041 ttcaatagca gaaatcagtg gaacgacatc gcctgaagca ataatagcta gcgcgctttt
    20101 tggtccaatg cccgaaacac tcaataattt tttgaataaa taacgttctt ctgttgtttg
    20161 aaaaccgaat agagaaatat tatcctcccg cacatgttga tacaaaaaga cttgtgcttc
    20221 tgtaccttct aatcgttgaa aggaaaacgg gtttcctgta attatttgat agccgatttg
    20281 tcctgcc
//
LOCUS       DASDYO010000042        20279 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.042, whole genome shotgun sequence.
ACCESSION   DASDYO010000042 DASDYO010000000
VERSION     DASDYO010000042.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 20279)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20279)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20279
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.042"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(36..884)
                     /locus_tag="U0290_001293"
     CDS             complement(36..884)
                     /locus_tag="U0290_001293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PhzF family phenazine biosynthesis protein"
                     /protein_id="HEM2301338.1"
                     /translation="MNLSVYVASAFSKNNKGGNKAGVVLNEPTLATAQKMAIAKQLGY
                     AETAFLTESNCADYKLEYFTPKEEVDLCGHATIGTFAILMHLNKIHKSQYTIETNSGV
                     LTITIKDGTIFMEQNQPTFYDTIPPNKLTGCFNLNLLNTNYPIQIVSTGLKDILIPIK
                     SEADLYALEPNFEEVKKVSKHYEVVGMHLYTFNADQIICRNFAPLYDINEEAATGTSN
                     GALACYLYKNHYLRKENYVFEQGYSLHSPSEIFVNLVISNKDEIEKVYVGGKGYYCEM
                     QDLSME"
     gene            complement(911..1387)
                     /gene="ybaK"
                     /locus_tag="U0290_001294"
     CDS             complement(911..1387)
                     /gene="ybaK"
                     /locus_tag="U0290_001294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cys-tRNA(Pro) deacylase"
                     /protein_id="HEM2301339.1"
                     /translation="MNKKTNACRILDKQKVNYELREYAWSEDSLDALHVAAETGNNPA
                     QIFKTLVLTGDKTGNIVACIPADKTLHLKHLAKISGNKKCELIAVDTLEKLTGYIRGG
                     CSPIGMKKLFPTFIDNSAESLDTILISAGKRGLQIELAPTDLKKVVRAEFAMIKEE"
     gene            1511..2161
                     /locus_tag="U0290_001295"
     CDS             1511..2161
                     /locus_tag="U0290_001295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5105 domain-containing protein"
                     /protein_id="HEM2301340.1"
                     /translation="MKKGLFSMVLVLAMVLVLSACGASRVEPKKAGEITVNAVVYNKD
                     TDKVKDVYGEDGSKFEKEFETSFKESFISTFTASFSSDVNLDKQVDEFYDALRKQVNE
                     KTSYTTKVTNDDKESPEIQFAVKGLDMKGVQTELVEELTKAATADPSLATDDQKMAEK
                     TMEIYTKAVQNADAVSEAKTVTLKLKADPDDDSLWKMENDMAFMQELTTAFFMGGM"
     gene            2267..3157
                     /locus_tag="U0290_001296"
     CDS             2267..3157
                     /locus_tag="U0290_001296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen hydrolase family protein"
                     /protein_id="HEM2301341.1"
                     /translation="MNTIKIALIQQKAVPNNKEANLKLAIKYIKEAHEKGADLVLFPE
                     MWSNGYAPPFEDAFNHPLATDFDNERTKWLNEAITEDSAYFLTLKELAKELKIGICAT
                     YLSKTEQKPQNTAIIIDRKGEIILDYAKVHTCDFSLEILLQSGEEFKVCEFDGIKLGG
                     MICYDREFPESARVLMLKGAEIILVPNACDMNPARLNQLNSRAFENMVGVAMANYPGE
                     KWGRSTAFSPIVFDENGDYRDNTIIETDDVSEGIFIAEFNLDEIRTYRENETWGNAYR
                     KPQTYTDLISLDVEAPFKRN"
     gene            complement(3192..3893)
                     /locus_tag="U0290_001297"
     CDS             complement(3192..3893)
                     /locus_tag="U0290_001297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF554 domain-containing protein"
                     /protein_id="HEM2301342.1"
                     /translation="MVLLGALVNGLGILIGSVIGMKLHNIPERMKDTVMKGMGLSVIV
                     LGIQMAFKTSNSLIVILSICFGAVIGEWLNIDYHLNQLGHWIERKVGAKGKSNVSKGF
                     VTATLIFVIGAMGIIGALDSGIRGNHDVLYTKSVMDGFIALLLSTTLGWGVMLSAIPV
                     FLFEGIIALFATQINQFVPADLMALIIKELTATGGIMILAIGLNLLGLTKIRVANLVP
                     GILVVALIVTGLYYF"
     gene            complement(4008..4649)
                     /locus_tag="U0290_001298"
     CDS             complement(4008..4649)
                     /locus_tag="U0290_001298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM2301343.1"
                     /translation="MKIGIIGATGRAGSRILEEAKNRGHEVTAIVRNAGKITQTHKDI
                     NILQKDIFDLTLSDLSDQNVVVDAYGISPDEAEKHVTSLDHLISVLNGTVSPRLLVVG
                     GAASLQIDEDGNTLLESKGLREAPYYPTARAQAKQLEHLKSHQAEFSWTYISPSAMFE
                     PGERTGDYQIGKDHLLFGSDGNSFISMEDYAIAVLDEIERPNHLNERFTVAGK"
     gene            complement(4733..5653)
                     /gene="rarD"
                     /locus_tag="U0290_001299"
     CDS             complement(4733..5653)
                     /gene="rarD"
                     /locus_tag="U0290_001299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EamA family transporter RarD"
                     /protein_id="HEM2301344.1"
                     /translation="MENKQNGQLGGIIAGALAYVCWGVLPIYWKLVTNVPPMEILAYR
                     IIWSFIFMLFLIVCLRKASMVFQETKDVLLKPKTLIAIIAAAFLVTANWYLFIYTVNS
                     GHVTEASLGYYINPLVNVLLATVILKERLSRGEIIAVISATIGVLILTWHLGSVPWAA
                     IGMAVTFSLYGLIKKVVSVSVWTGLTLETMIITPFALIYVIFFATNGLMQYAAQTNII
                     LVGAGVVTAIPLLLFATAAKKISYTMVGFLQYIGPTLMLALGVLLFKESFDHIQLFAF
                     MFIWLALIIFTISHIYSAAKIKQLANAAKK"
     gene            complement(5762..6292)
                     /locus_tag="U0290_001300"
     CDS             complement(5762..6292)
                     /locus_tag="U0290_001300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyisoprenoid-binding protein"
                     /protein_id="HEM2301345.1"
                     /translation="MTVEKWNVDPAHSSIEFQVKHMMVSKVKGAFSDFTADIEMDPED
                     LTSAKLNFYVAAASVDTRQAQRDGHLKSEDFFNVEKYPNVTFSATKITADGDDEYEVT
                     GDLTIRDVTKPLTLEVSYEGTGKDPNTGNMVAGFEAKGKFNRKDFGLNYNAALETGGV
                     LIGDEVKLNIQIEASK"
     gene            6548..7009
                     /locus_tag="U0290_001301"
     CDS             6548..7009
                     /locus_tag="U0290_001301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2301346.1"
                     /translation="MVGINTDTENISELLKTYWSIQRISAGYADQNAASLGLTIQQLA
                     MINVIYSTPGISVADLTKRLIITGSSAAANVDGLISLGLVVKLNKTIPNDSMDLTLKL
                     SKKGEDLSKRSTANAFMYKAMMKVFENLTENEIEELIRLNKKVETLLKKSK"
     gene            complement(7061..8521)
                     /locus_tag="U0290_001302"
     CDS             complement(7061..8521)
                     /locus_tag="U0290_001302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464325.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM2301347.1"
                     /translation="MKKETHGEIRRDLKTRHLSMIAIGGSIGTGLFLASGNAIHTAGP
                     GGALVAYIAIGIMVYFLMTSLGEMATYMPVSGSFSTYASRFVDPAFGFALGWNYWFNW
                     AITLAVDISTAAIIVQFWLPNTPAWLWSAIFLILIFGLNALSVKAYGESEYWFSIIKV
                     ATVIIFLIVGVLTIVGILGGEVIGFSNFTAGDAPFKGGFFAILGTFLIAGFSFQGTEM
                     VGIAAGESATPETSVPKAIKQVFWRILLFYIFAIFIIGMIIPYTNPNLLSAEATDVAI
                     SPFTLVFEKAGLAFAASVMNAVILTSVLSAGNSGLYASTRMLWAMARDKKAPKFLGKV
                     NRRGIPMAALIVTTIVGAMTFITTLTENGTVIYTWLLSASGLTGFIAWVGIAISHYRF
                     RKAFIKQGHDLSELKYKAKFFPFGPILALILCILVIVGQDYAAFLKPEFTNPAWWQKI
                     GISYIGLPIFLVFWLSFKFTNKTKVIPLEDCKFDQK"
     gene            complement(8877..9638)
                     /locus_tag="U0290_001303"
     CDS             complement(8877..9638)
                     /locus_tag="U0290_001303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464326.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="blue-light photoreceptor"
                     /protein_id="HEM2301348.1"
                     /translation="MTAYPQFDVILKALNLSSVGVIITDPEQKDNPIIFVNTGFENIT
                     GYAKEEALGSNCHFLQGDDTDKKEVAKIRHAINEKSTANVLLKNYRKDGTSFMNELTI
                     EPIYDDHNHLYFVGIQKDVTTEHDYQLELEKSLTEIEKLSTPIVPIKENICVLPLIGS
                     LTHDRFQHMSEYVSEYMDHGKEDYLIMDLSGLAEFNEDAVMNLVKFHGFMKLTGVELI
                     ITGISPKFAMTLIRYEENLASLTTYSTIKEALQFY"
     gene            9791..10144
                     /locus_tag="U0290_001304"
     CDS             9791..10144
                     /locus_tag="U0290_001304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301349.1"
                     /translation="MYITFTDSAKNRLAALRSNLEGRLHLYYDTEGCSCENSGIFTLR
                     LVEEKTAEDDEIESNIGPVLIKRWTEMFLEEALTIDYNDTEKTMILKSDGQYYNRNLL
                     LVTNTDEVISCPVTS"
     gene            10299..10937
                     /locus_tag="U0290_001305"
     CDS             10299..10937
                     /locus_tag="U0290_001305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HEM2301350.1"
                     /translation="MEQPSVDELKNWRNVMLLHRFALEEVNTKLKILNEEFQFIHDYN
                     PMEHLKSRVKSLESIGAKLEKKKVDITPENALKYVHDIAGIRITCSFVSDIFRIHEML
                     AGQSDITIKRVKDYVTNPKPNGYRSLHLLCEVPVFLTNRSEKMTVEIQIRTVAMDFWA
                     SLEHKIYYKYQQEAPIELVKELQDAARIITHLDEKMKNLNDQIDQYKKEKEK"
     gene            11066..13114
                     /locus_tag="U0290_001306"
     CDS             11066..13114
                     /locus_tag="U0290_001306"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter"
                     /protein_id="HEM2301351.1"
                     /translation="MEIFLYVLALLVAIFISNLLNRFVPFVSVPLIQIGLGVLIAIMP
                     ITFDLQLNPELFLVMFIAPLLFNDGRQTDKAALWGMRMPILVLALGLVFATVVVIGYF
                     VHWMIPTIPLAAAFALAAALAPTDAVAVSSLSGRINLPKRIMNLLEGEALINDASGLV
                     AFQFAIAAMVTGVFSFMDASISFFVIAIGGILVGLILSWLKFRLLKWVRGLGMEDVTF
                     HMLIQILTPFIIYLAAEEIHVSGILAVVAAGIMHSMEQKKMDPQSVKLNVVSQSTWSV
                     IIFVLNGLVFLLLGTQLPAITEVVWNDSGSSNLQVMAYILSITAALILLRFLWVYISW
                     SIGAKQRQKQNKKTQLPKFRPVVLTSLSGVRGAVTLASALAIPFFLDDGSLFPQRSLI
                     IFIASGVILCTLVIATFILPLLAKSEEVTTEDERAETATRIRILRNVIRELKEQTLPE
                     TKAATDEVIEDYRRRIYDLQQNNSSNRGMDERERAKRLEIIQWERENTQKMTDEGRIV
                     ATDSYRYQHYLNMMEQAIKQRFRTKIKTAWMFLYRLIMLVIHPKKWGRITHKVKKGIS
                     KDSERFQAIRQLREENEVLIISKLKEQLTKENVDIIGPLITEHTIFLERVRKEHSPRG
                     KRAKFEQKKREVQVLAFQLERDIIQNMFEKGGISRDLARDLRQNLNMIETYLYDDFLE
                     "
     gene            complement(13154..13627)
                     /locus_tag="U0290_001307"
     CDS             complement(13154..13627)
                     /locus_tag="U0290_001307"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEM2301352.1"
                     /translation="MKSYPFFKYNMNIKTFFMFIVCFAILSLGLYFFITFESLRIWQF
                     FGIYTFFSAYTIYVLTTYVNGTVSVNSHALFYKKGFSDKKYLFNQYMLECDTRLHGRT
                     TSFLPFYTINILDLETGKETKIKIRNAAIVHRNGRKNFHLEIVNLAEQLKKIQAK"
     gene            complement(13655..14113)
                     /locus_tag="U0290_001308"
     CDS             complement(13655..14113)
                     /locus_tag="U0290_001308"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003732943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301353.1"
                     /translation="MKKYRFSELNINIGTVLLIIMISFTFITFIIIGMTLPVPWEYFV
                     ILFVIALMFSVFFKRLFPSNFSVSEEAFYYKEKAYPYSEYLIECDAKLIRFNGGSRGM
                     PYYRIVIINKDTRAEKLIRVYNAERRYKNANKHMQELMEELRNEINQYQA"
     gene            14323..14865
                     /locus_tag="U0290_001309"
     CDS             14323..14865
                     /locus_tag="U0290_001309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2301354.1"
                     /translation="MEIGKRIKNLRLSKNLTQEELGERTDLTKGYISQLERDLSSPSI
                     ETLFAILEVLGSTPKDFFDEEEHNQKVIYGELEHTFFEDEEKGYRIKWLVPESNEKEM
                     EPVLLEIEANSCFKSFEPSLSETFAYVLKGEVTVLLGRNEYVAKKGEAIYFHAADEHQ
                     IINRSNEQATLILVATESYL"
     gene            14881..15975
                     /locus_tag="U0290_001310"
     CDS             14881..15975
                     /locus_tag="U0290_001310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464334.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301355.1"
                     /translation="MTETIIRFENVTKQFDNDPPVLDNVSFEIEKGKFYTLLGPSGCG
                     KTTILRLIAGFLEASEGQIYLGDKVINQIPANKRPVNTVFQDYALFPHLNVYENVAFG
                     LRIKKLKKDAIDEKVKEALRFVNLKGYEKREISEMSGGQRQRVAIARAIVNEPEVILL
                     DEPLSALDLKLRTEMQYELRDLQKRLGITFIFVTHDQEEALAMSDEIFVLNKGEIQQS
                     GTPIDIYDEPINKFVADFIGESNIVNGKMIQDFEVEFVERRFECVDQGFRPNEVVEVV
                     IRPEDLEITSAEKGQLQVTVDWMLFRGVHYEVGCIDTDGNEWLVHTTRKVRVGDKIGL
                     AFEPEAIHVMRLGETEEEFDKRLDSYDEVQ"
     gene            15975..16784
                     /locus_tag="U0290_001311"
     CDS             15975..16784
                     /locus_tag="U0290_001311"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301356.1"
                     /translation="MNRRTRTVYLVPYVLWILLFVVAPILLIVYYSFFDVDGNFTVDN
                     YIHFFTPVYLKMTASSFWYAFLITVFTLLISYPTAYLLTKLKHKQLWLLLIILPTWIN
                     LLLKAYAFIGIFGTYGAANQFLEIIGIGSKQILFTDFSFLFVSTYIFIPFMILPIFNA
                     IEEINPTLIQASRDLGASSLTTFRRVIFPLTADGVKSGCQAVFIPALSLFMITRLIAG
                     NRVITLGTAIEEHFLVTQDWGMGSTIGVFLIIAMILIMFLTGSKKKRGARK"
     gene            16781..17587
                     /locus_tag="U0290_001312"
     CDS             16781..17587
                     /locus_tag="U0290_001312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301357.1"
                     /translation="MKKSKWGTIYLVLVFVILYAPIFYLIFYSFNKGGTMHNFSGFTL
                     GYYKEVFQDTRLLIIVLNTFVIALLSSVIATIIGVCGALAIKFMPKPFAKNSLLSLNN
                     VLIVSPDVIIGASFLIFFTILGVKLGFISVLVSHIAFSIPIVVLMILPKLQEMSPTLM
                     DAARDLGASQWQVLSKVILPYIMPGVLAGFFMALTYSLDDFAVTFFVTGNGFSTLAVE
                     IYSRARQGISLSINALSTLIFLFTIILVIGYYFINQRNTSKNIRTGATKE"
     gene            17584..18657
                     /locus_tag="U0290_001313"
     CDS             17584..18657
                     /locus_tag="U0290_001313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2301358.1"
                     /translation="MKQLLKIFVPVIVVALLMMLLATTMNRSEGYAGSNTLTIYNWGD
                     YIDPSLITKFEKETGIKVIYQTFDSNEAMMTKIEQGGTTFDIAVPSDYAISKMKEENL
                     LIPLDHSKLPNEKYLDPRFMDLSFDDDNKYSMPYFWGTLGIIYNKEMFPDKNFDTWNA
                     LFDPELKNQILLIDGAREVMGLGLNSLGYSLNDTNKAHLQAARDKLETMTPNVKAIVG
                     DEIKLLMADNEAGVAVTFSGEAAEMLSENEDLEYVIPKDGSNLWFDNMVIPKTAKNVD
                     GAHKFINFMLKPENAAINAEYVGYATPNEKAVKLLPKEISSDERFYPDMDELNNLEVY
                     DNLGKRMLSYYNELFLEFKMYRK"
     gene            complement(18720..19493)
                     /locus_tag="U0290_001314"
     CDS             complement(18720..19493)
                     /locus_tag="U0290_001314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2301359.1"
                     /translation="MKKYVVITGASSGIGYATAKGFAKRKNNLILIARREANLLKLKN
                     EIEKEVPEIEVLIKAIDLTKIDRLEKLFSELDPYFIETWINNAGLGYYSEVKNQSLTK
                     TLQLLHLNIEALTVLSVLYVRKYHDQSGTQLINVSSAGGYTMVPAAATYCASKFYVSS
                     FTEALSLELRESCSPLQAKVLAPAATKTEFGQKANDVSDYDYDKKFNNYHTSDEMAQF
                     LLDLYDSDKIVGMIDRKAFSFTLTENLFSYANQASSNQK"
     gene            complement(19577..19948)
                     /locus_tag="U0290_001315"
     CDS             complement(19577..19948)
                     /locus_tag="U0290_001315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2301360.1"
                     /translation="MNYTIGAFSREVELSIDTLRYYEKEKLILPKRNEINRRIYDSSD
                     ITWINFIKKLKQTGMPIKDIKEYAKLRYLGDQTIEQRMTLLYKQYDVLVEKREEIELY
                     TQFLLNKIDIYKEMLSARDIK"
BASE COUNT         6550 a         3610 c         3879 g         6240 t
ORIGIN      
        1 tgaaatgaag tgaagtggaa tatatttacc atgagttact ccatgcttaa atcctgcatc
       61 tcacagtaat atcctttacc gcccacatac actttctcta tttcgtcttt attacttatg
      121 actagattaa cgaagatttc ggaaggcgag tgcaaagaat agccctgttc aaatacataa
      181 ttttcttttc gtaagtagtg atttttataa agataacagg ccaaagcacc attagaggtc
      241 ccagtcgcag cttcttcatt aatgtcgtat agtggcgcga aattccgaca aataatttgg
      301 tcagcattaa aagtatacag gtgcattccg actacttcat aatgcttact gactttttta
      361 acctcttcaa aattcggctc tagggcatat aaatctgctt cacttttaat tggaattaat
      421 atatctttta aaccagttga cacaatttga atagggtagt tagtatttag taaatttaag
      481 ttaaaacaac ctgttaattt attgggggga attgtatcat aaaaagttgg ttgattttgt
      541 tccatgaaga tagtgccatc ttttatcgta atcgtcagta caccgctatt tgtttcaatt
      601 gtatactggc tcttatgaat tttatttaaa tgcatcaaaa tcgcaaaagt gccgattgtc
      661 gcatgaccac ataaatcgac ttcttctttc ggagtaaaat attctaattt ataatcagca
      721 cagttagatt cagttaggaa agcagtttcc gcatagccta attgttttgc aatggccatt
      781 ttttgagcag tggcgagtgt tggttcgttc aatacgacac ccgccttatt tccaccttta
      841 ttattcttac taaatgcact tgcaacataa acagataaat tcataaaaat aaaactccct
      901 tgtaaaaact ttattcttcc ttaatcatcg caaactccgc acgtactact tttttcaaat
      961 cagtaggggc tagttcgatt tgtaatcctc tttttccagc cgaaatcagt atagtatcaa
     1021 gcgattcagc gctgttatca ataaacgttg gaaataattt cttcattcca atcggcgaac
     1081 atccaccgcg aatatagcca gtcagcttct ctaacgtatc taccgcaatc aattcacatt
     1141 ttttattacc gctaatcttt gccaaatgtt ttaaatgcaa agtcttatcg gcaggaatgc
     1201 acgctacaat atttcctgtt ttgtcaccag tcaggactaa tgttttaaaa atctgtgcgg
     1261 gattattccc tgtttctgcc gcaacatgaa gcgcatcaag ggaatcctcg ctccaggcat
     1321 actcacgtaa ttcatagttt accttctgtt tatctaaaat ccgacacgca tttgtctttt
     1381 tattcaagtc tttcacctca attaattcag aaatatgtat aatttatgac actttttgtg
     1441 aaatagttgg cttttccctt ttcattctgt acaatgaagt ggaattcaaa taagaaaggg
     1501 agatttacta atgaaaaaag ggttatttag tatggttctt gtgctagcaa tggtacttgt
     1561 attaagtgca tgtggcgcat caagggtaga accaaaaaaa gcaggagaaa tcacagttaa
     1621 tgccgtagtc tacaacaaag atacggataa agtaaaagat gtatatggtg aagatggttc
     1681 taaattcgaa aaagaatttg aaactagttt taaagaaagc tttatcagta catttacagc
     1741 aagcttttct agtgatgtaa acttagacaa acaagtggat gagttttatg atgcacttcg
     1801 caaacaagta aacgaaaaaa cttcgtatac tactaaagta acaaatgacg acaaagaaag
     1861 tccagaaatt caattcgctg ttaaagggct tgatatgaaa ggcgttcaaa cagaattagt
     1921 tgaagaatta acaaaagcag caacagctga tccatctctt gcaacagatg atcaaaaaat
     1981 ggctgaaaaa acaatggaaa tctatacgaa agctgttcaa aacgcagatg cagtatcaga
     2041 agctaaaaca gttacactta aattaaaagc agatccagat gacgattctt tgtggaaaat
     2101 ggaaaatgac atggcattca tgcaagaatt aacaacagca ttctttatgg gcggcatgta
     2161 agcttttata tggcaaaaca ccaataactt tcgggttgtt ggtgtttttt tgtttccaag
     2221 aataaatgtt ataataacat aaagatttac taatgggagg cgctatatga atactataaa
     2281 aatcgcatta atccaacaaa aagcagtacc aaataataag gaagccaatt tgaaattagc
     2341 cattaaatat ataaaagaag cgcatgaaaa aggagcagat ttagtacttt tccctgagat
     2401 gtggtcaaat ggttatgcgc caccttttga agatgctttt aatcatccac tagctactga
     2461 ttttgataat gaaagaacca agtggttaaa tgaagctatc acagaagaca gtgcgtattt
     2521 tttgacactg aaagaacttg ccaaagagtt gaagattggc atttgcgcta cgtatttgtc
     2581 taaaacggaa caaaaaccac aaaatactgc tattattatt gaccgaaaag gagaaataat
     2641 tttagactat gccaaagtcc atacgtgtga tttttcttta gaaatattac tacaaagtgg
     2701 cgaggaattt aaagtttgtg agtttgatgg tattaagctg gggggcatga tttgctatga
     2761 ccgcgagttt ccagaaagtg ccagagttct catgttaaaa ggggcagaaa ttatcctcgt
     2821 tccaaatgct tgtgatatga atccagccag acttaatcaa ctaaattctc gtgcttttga
     2881 aaacatggtt ggcgtagcga tggcaaacta tcctggcgaa aaatggggca gatccactgc
     2941 tttttccccg attgtttttg atgaaaatgg ggattaccgc gataatacga ttattgaaac
     3001 agacgacgtt tcagaaggta tttttattgc tgaatttaat ttagacgaga ttcgaactta
     3061 ccgggaaaat gaaacgtggg gaaatgccta ccgaaaaccg caaacatata cagatttaat
     3121 aagtttagat gtagaagcgc catttaaacg aaattaaaaa aacagagatg agcgattctc
     3181 tgttttttct tttaaaaata ataaagcccg gtaacaatca gcgcaacgac taaaatcccc
     3241 ggaacaaggt tcgcgacccg aatcttggtt aaaccaagca agtttagacc aattgccaaa
     3301 atcataatcc cgcctgtagc cgttaattcc tttataatta gtgccatcag gtctgccgga
     3361 acgaattgat taatctgggt tgcgaataac gcgataatgc cttcaaagag aaacactgga
     3421 atcgcagaaa gcataacgcc ccaaccaagt gtcgtactaa gaagtagggc gataaatcca
     3481 tccatcaccg atttcgtata aagtacatca tgattgccgc gaatgccgct atcaagcgca
     3541 ccaataatcc ccatcgcacc aatcacaaaa ataagtgtag ctgtcacaaa gccttttgaa
     3601 acattacttt ttcccttggc accgacttta cgttcaatcc agtgcccgag ctgattcagg
     3661 tgataatcta tattaagcca ttccccaata acggctccaa aacaaatact taaaatgaca
     3721 ataagcgagt tgctcgtttt aaatgccatt tgaatgccaa ggacgataac ggataaaccc
     3781 atccctttca tgaccgtgtc tttcatacgt tcagggatat tatgtaattt catgccaata
     3841 acagagccaa tcaaaatccc aagcccattc actagcgcac caagtagaac cattttcttc
     3901 ctcccttttt ttacatatag caatagtata caggaagttt tcgccaattg ggagttttat
     3961 tttgtacaaa aaagtcgaag gatcaaagtg atccttcgac tttaagtcta ttttccggct
     4021 actgtaaagc gttcatttaa gtgattaggt cgttcaattt catctaaaac agcaattgca
     4081 tagtcttcca tactgataaa actattacca tcgctaccaa ataagagatg atcttttcct
     4141 atttgatagt ctccagtgcg ttcgccgggc tcaaacatgg cagaagggct aatgtaagtc
     4201 caactgaatt ctgcttgatg tgattttaaa tgctctaatt gtttcgcttg cgcacgtgca
     4261 gttggatagt aaggcgcttc ccgtaggccc ttggactcta aaagcgtgtt tccgtcttca
     4321 tcaatttgca gactagctgc tccgccaacg acaagtaagc gcggagacac agttccattt
     4381 aaaacagaaa ttaagtgatc aagggaagtg acatgttttt ctgcttcgtc tggactgatg
     4441 ccataagcat caacaacgac attttggtct gataaatctg aaagagttaa atcaaaaata
     4501 tctttttgta aaatattaat atctttgtgt gtttgcgtga ttttcccggc gtttctaaca
     4561 atggctgtta cttcgtgacc gcgatttttt gcttcttcta aaattctcga accagctcgg
     4621 cccgtagcac caatgatacc aattttcatg aaaaaagccc cctattcatt tttatggaat
     4681 agattctcgt ttgatagaag aattattccc gaaagagggg actgggaaac atttattttt
     4741 ttgcggcgtt tgctaattgt ttaattttgg ctgcggaata aatgtgagaa atcgtgaaaa
     4801 taatcagtgc taaccaaata aacatgaatg caaacaattg aatatgatcg aaactttctt
     4861 taaatagtaa tacgccgagt gcgagcatta atgttggtcc gatatattgc aggaagccaa
     4921 ccattgtata gctaattttt ttcgcagcag tggcaaacag aaggagtggt atagctgtaa
     4981 cgacaccagc gccaactaaa ataatattgg tttgtgccgc gtactgcatt aatccattgg
     5041 tcgcgaaaaa gattacataa ataagcgcga atggcgtaat aatcattgtc tcaagggtta
     5101 aaccagtcca aacagatacg gaaacgactt ttttaattag cccataaagc gagaaagtaa
     5161 ccgccatacc gattgccgcc caaggaacag atccaagatg ccatgtgagg attaaaacac
     5221 cgatagtagc agaaataaca gcaataattt cgccacgact caagcgctct tttaagataa
     5281 ctgttgcgag aagtacgttt acaagtggat tgatgtaata accaagactt gcttcggtca
     5341 catgcccact attcaccgta taaatgaata aataccagtt tgctgtcact aaaaaagctg
     5401 ccgcaataat cgcaatcagc gtttttggtt taagcaatac gtccttagtt tcttgaaaaa
     5461 ccatcgaagc ttttcgcaaa caaacgatca aaaataacat aaaaataaaa gaccatataa
     5521 ttctataggc caaaatctcc attggtggga catttgtgac tagcttccag taaatcggaa
     5581 ggacacccca acatacataa gcgagagcgc cagcgatgat tccgcctagc tgtccatttt
     5641 gtttattttc catagcgatg ttagccccct ttttttaaac aatagaacta ttttagctta
     5701 aaagggggaa taaagctaca aaaaaaacta cgaataggct agctattcgt agtttctaca
     5761 attatttgct tgcttcgatt tggatgttta atttcacttc gtcgccaata agtacgccac
     5821 cagtttctaa cgcagcattg taattaaggc caaagtcttt gcggttgaat ttaccttttg
     5881 cttcaaagcc agctaccatg ttgccagtat ttggatcttt tcctgttcct tcgtagctta
     5941 cttctagtgt aagaggtttg gttacgtcgc gaatagttaa gtcaccagtc acttcgtatt
     6001 catcatcgcc gtcagctgta atttttgttg ccgaaaaagt cacgtttgga tatttttcta
     6061 cattaaagaa gtcttcgctt ttcaaatgtc catcacgttg cgcttgacga gtgtcaacag
     6121 aagcggctgc aacgtagaag tttaattttg cagaagttaa atcttctgga tccatttcga
     6181 tatccgctgt gaaatcgcta aatgcacctt ttacttttga taccatcatg tgttttactt
     6241 gaaattcgat tgaactatgc gctgggtcta cgttccattt ttctactgtc attgtttcat
     6301 tcctccaaat atgttttttt ataaaagcat tctcttttaa tctagcctaa atcctaagaa
     6361 attaaacctg agaaaaaata cttttacgcc ttagaaaagc aattgcttaa ctgtttataa
     6421 gtaaactata tcatacttac ttttaataag caactataaa aacgtattat aaatatattt
     6481 ttttcgtaaa tatgattgag tttttcggtt aaagtgcgta gaataggtta caagaggagg
     6541 ttggatgatg gtaggaatta atacagatac agaaaatatt agtgaactat taaaaactta
     6601 ttggtcaatc cagcgaattt cagcgggata tgccgatcaa aatgcggcga gtttaggatt
     6661 aacgattcag caacttgcca tgattaatgt gatttacagc acacctggta tttcagtggc
     6721 ggatttaacg aaacgattaa ttattactgg aagttcggct gcagctaatg ttgacgggtt
     6781 aatcagcctt ggcttagtag tgaaattaaa caaaacaatt ccaaatgaca gcatggattt
     6841 aacactcaag ctttcgaaaa aaggagaaga cttatcgaaa cgctccactg caaacgcttt
     6901 tatgtataaa gccatgatga aagtattcga aaacctgacc gaaaacgaaa tagaagaatt
     6961 aattcgccta aataaaaaag tcgaaacctt actgaaaaag agtaaataaa aacatctcct
     7021 gtatcattca agtaaaaatg aatgaacaag agatgttttt ttatttttga tcaaatttgc
     7081 agtcttccag tggaataact tttgttttat ttgtaaattt aaaagatagc cagaaaacaa
     7141 ggaaaatagg gaggccgata taagaaatac cgattttttg ccaccaagca ggattcgtaa
     7201 attctggttt caaaaatgcc gcgtaatctt gaccgacaat aactaaaata cataaaatta
     7261 gtgctaaaat aggtccgaat gggaaaaatt ttgctttata ttttagttca cttaagtcat
     7321 gtccttgttt gataaatgct tttcggaaac ggtaatgact gatagcgatg ccgacccaag
     7381 caataaatcc ggttaaacca gaggcggaaa gtaaccacgt ataaatcact gtgccgtttt
     7441 ctgttagcgt tgtaatgaat gtcattgcac caacaatcgt cgtaacaatt aaagctgcca
     7501 tcggaatacc acgacggttt actttaccca agaatttagg tgctttttta tcacgagcca
     7561 ttgcccaaag cattcttgtg gaagcataaa gacctgaatt accagcagat aaaacagaag
     7621 tcaggataac cgcattcatc acggaagccg caaatgcaag accagctttt tcaaatacga
     7681 gtgtaaatgg gctaattgcc acatctgttg cctcggcact aagtaaattc gggttagtat
     7741 aaggaataat catcccaata atgaaaatcg caaaaatata aaatagcaaa atccgccaga
     7801 atacttgttt aatcgctttt ggcacgctgg tttctggagt agcactttca ccagctgcaa
     7861 taccaaccat ttcagtccct tggaaagaaa atccagcaat taagaaggta cctaagatgg
     7921 caaaaaatcc acctttaaac ggagcatcgc cagcagtaaa gttagaaaag ccaataactt
     7981 cgccgccaag aattccgaca atagtaagca cgccgacgat aaggaaaata ataaccgtgg
     8041 ccactttaat aattgaaaac caatactctg attctccgta tgcttttacc gaaagcgcgt
     8101 ttaagccgaa aatcaaaatt aagaaaatcg cgctccatag ccaagcgggg gtgttcggta
     8161 gccaaaattg aacgataatt gcagcagtgg aaatatcaac tgcaagtgta atggcccagt
     8221 taaaccaata attccaacca agcgcaaaac cgaaagctgg gtcaacaaat cgactagcat
     8281 aggtactaaa tgaaccagat acaggcatgt aagtagccat ttcgcctaaa cttgtcatta
     8341 aaaagtacac cataatcccg attgctatat aagcaactaa agcgccacca ggtcctgctg
     8401 tatgaatcgc attaccactt gctaaaaata atcccgtccc gattgaacca ccaatggcaa
     8461 tcatggacaa atgccttgtt tttaagtcac gacgaatctc gccatgtgtt tctttcttca
     8521 ctattaatct ccctttctat tatcagagga agtgcgcaaa aacagccaat ctgcaagaaa
     8581 ttggctgtta cgtattttac caacatcatt ttgtcagata gcacacctat aagaaatttc
     8641 gacaaattct tatagcagtc cagccccttt aggaaactgt cccaacaact atttctaaac
     8701 aaagagaaaa tagtcacttc ggcgatcaac ctgttcattc tttgtcgtcg gcgtctttgt
     8761 ttcgcctcga aaaaattact agtgcatctc gcaacctcta cctcaccatt tggatgaggg
     8821 tttatatttg attatttacc cataataacg gaaaacgggc tattttgcaa tatcttttag
     8881 taaaattgta atgcttcttt gattgtgctg tatgtagtta agctggctag gttttcttcg
     8941 tagcgaatta atgtcatggc gaattttggc gatattccgg tgatgatgag ctctacacca
     9001 gttaatttca taaatccgtg gaacttcaca agattcatta ccgcatcttc attaaattca
     9061 gctaaaccag aaagatccat aatcaaataa tcttccttgc catggtccat gtattcactc
     9121 acatattcag acatatgctg aaaacggtca tgtgttagcg agcctatcag tggtaacaca
     9181 caaatgtttt ctttaatcgg aacaattggc gtggaaagtt tctcgatttc tgttaatgat
     9241 ttctcgagtt ccagctgata gtcgtgctct gtcgtcacat ctttttgaat gccaacaaaa
     9301 tagagatgat tatgatcatc gtaaatcggt tcaatcgtaa gttcattcat aaaagaagta
     9361 ccatcttttc ggtaattttt tagtaaaaca ttcgcagttg atttttcgtt aatggcatga
     9421 cggatttttg caacttcttt tttgtcagta tcatctcctt gtaaaaagtg acaattggag
     9481 ccaagtgctt cttctttagc atagccggta atattttcaa aaccagtgtt aacaaaaata
     9541 attggattat ctttttgctc aggatctgta ataattactc ctacgctaga caaatttaat
     9601 gcttttaaaa taacatcgaa ttgtggataa gcggtcatct gcgtgtttct ccccctttgt
     9661 aaatacattt ctatcatacc acgcaaatga atgaaaaccc aatgtataat ttgtgaaatt
     9721 aatcgtatgt gagcagtgcg gaggtaaagt tggaaatgtg ggtgtataat agagctagag
     9781 gtgataagtt atgtatataa catttacaga tagcgctaaa aatcggcttg ctgcactacg
     9841 gtcgaattta gaagggcggc tacatttgta ttatgataca gaaggctgtt cttgcgaaaa
     9901 tagcggtatt ttcacattgc gattagtaga agagaaaaca gcggaagatg acgaaattga
     9961 atcaaacatt ggtccagtgc taattaaacg atggacagaa atgtttttag aagaagcgct
    10021 aactatcgat tacaacgaca cagaaaaaac catgattcta aaaagcgatg gtcagtatta
    10081 taatcgtaat ctactgcttg tcacaaatac agacgaagta attagttgcc cggtaacttc
    10141 ataataatag aagaaaagcc tagaataaat tttttattct aggctttttt atgaaaattt
    10201 catgagaaag tggtgaaact ttagacatat agttacactg acctcggttt tgtagtaaca
    10261 tggaatagga agtttataca tatggaagga gtgtcctcat ggaacaacca tcagtagatg
    10321 agctaaaaaa ttggcgaaat gttatgcttc ttcaccgttt tgcgttagaa gaagtcaaca
    10381 cgaaacttaa gatattgaat gaagaatttc aatttattca tgattataat ccaatggaac
    10441 atttgaagtc acgtgtgaag tcactagaaa gtatcggagc aaaattagaa aagaaaaagg
    10501 tggatatcac gccagaaaat gcactaaaat atgtacacga tattgcgggc attcggatta
    10561 cttgttcttt tgtttcagat atttttagaa ttcacgaaat gcttgcaggg caaagtgata
    10621 tcactatcaa acgagtaaag gactatgtaa cgaatccaaa acctaatggc tatcggagtt
    10681 tacatttact ttgcgaagta cctgtattcc tgacaaatcg ttccgagaaa atgaccgtgg
    10741 aaatccaaat tcggacagtt gccatggatt tttgggcgag tttggagcat aaaatttatt
    10801 ataaatatca acaagaagca ccaattgagt tagtaaaaga attacaagac gccgcacgaa
    10861 ttatcaccca tttagatgaa aaaatgaaaa acttaaacga tcaaattgat caatataaaa
    10921 aagaaaaaga aaaataatct aatagggagc tttatttctt tgcaagcggg atggatgcat
    10981 agaaataaag ctgttttata tttgcgagtt aggttatttt gcttcataat aatataggag
    11041 aaaaaacgaa aggggacgat acatattgga gatattttta tatgttttag cattacttgt
    11101 ggccatcttt atttctaatt tactcaaccg gtttgttccc tttgtttcgg taccactaat
    11161 ccaaattggc cttggtgtat taattgccat tatgccgatt acgtttgatt tgcaattaaa
    11221 tccagaactt tttctagtga tgtttattgc gccattgcta tttaatgacg gaagacagac
    11281 ggacaaagca gctctttggg gtatgcgaat gccgatttta gtattagcgc tcggacttgt
    11341 atttgcaacg gttgtcgtga ttggatattt tgtccactgg atgattccga cgattccact
    11401 agcagcagct tttgccttag cagcggctct tgcgccaacg gatgctgtag cagttagttc
    11461 tctttctggg cggattaatt taccgaaacg aattatgaat ttgctcgaag gtgaggcatt
    11521 aatcaacgac gcgtcaggac tcgtggcatt ccagttcgcg attgcagcga tggtgaccgg
    11581 cgttttcagt tttatggatg caagtattag cttttttgtc attgcgattg gtggtatttt
    11641 agttgggctc attttgagtt ggttaaaatt ccgattgtta aaatgggttc gcggccttgg
    11701 catggaagat gttacgtttc atatgcttat ccaaatttta acaccattta ttatttactt
    11761 agcggcagaa gaaatccatg tttctgggat tttggcagtt gttgcagccg gaattatgca
    11821 ctcgatggaa caaaagaaaa tggatcctca gtcggtgaaa ttaaatgtcg tttcgcaaag
    11881 tacttggtcg gtgatcattt ttgttttaaa tggtttagta tttttacttt taggcacaca
    11941 acttcctgcg attacagaag tagtttggaa tgattcagga agtagtaatt tacaagtgat
    12001 ggcttacatt ttgtctatca cagctgcctt aattttactg cgctttttat gggtatacat
    12061 atcgtggagc atcggcgcaa aacaaagaca gaaacaaaat aaaaaaacac agctacctaa
    12121 gtttagaccc gttgtactta catcgctttc tggtgttcgc ggggcagtta cacttgccag
    12181 tgcgctcgca atcccgtttt tcttagatga cggatcacta tttccgcagc gctcgctaat
    12241 tatttttatc gcatcaggtg ttattctttg tacattagtg attgcgacat ttattttacc
    12301 gttacttgcc aaaagtgaag aagtgacaac ggaagatgaa cgagctgaaa ctgcaacccg
    12361 gattcgaatc ctgagaaacg taatcaggga attaaaagaa cagacgctac ctgaaacgaa
    12421 agcggcaacg gatgaagtaa ttgaagatta tcgcagacga atttacgatt tacagcaaaa
    12481 taatagttcg aatcgaggca tggatgaaag agaacgtgcc aaacgattag agatcatcca
    12541 gtgggaacgt gaaaacaccc aaaaaatgac cgatgaagga cgcattgttg ctacagatag
    12601 ctatcgttat caacactatc ttaatatgat ggaacaagcg atcaaacagc gcttccggac
    12661 aaaaataaaa acagcctgga tgttccttta tcgtctaata atgcttgtca ttcacccgaa
    12721 aaaatggggt agaatcacgc ataaagtgaa aaaaggtatt tctaaagaca gcgaacgatt
    12781 ccaagcaatt cgccaattac gcgaagaaaa tgaagtactc attatttcta aactcaaaga
    12841 acaactaacg aaagagaatg ttgatatcat tggcccatta attaccgaac atactatttt
    12901 cctagaacgc gtaagaaaag agcacagtcc aagaggtaag cgagcaaaat tcgaacagaa
    12961 aaaacgcgaa gtccaagtgc tggctttcca attagaacgt gatattattc agaatatgtt
    13021 tgaaaaaggc gggatctcga gagacttagc ccgagactta cgccaaaatt taaatatgat
    13081 tgaaacatat ttatatgatg attttttaga atgacaaaaa gccctaagaa cagtgtcttg
    13141 ttcttagggc tttctattta gcttgtattt tttttaattg ttcggcgaga tttactattt
    13201 ctaaatggaa gttctttctg ccatttctgt gaacgatagc tgcattacga atcttaattt
    13261 ttgtttcttt acctgtctct aaatcaagaa tattgattgt gtaaaaggga agaaaagaag
    13321 tggtccgccc gtgcaatctg gtgtcacact ccagcatata ttgattgaaa agatactttt
    13381 tatccgaaaa ccctttttta taaaagagcg catgactatt aacggaaaca gtaccattaa
    13441 cataagtagt cagtacgtaa atagtatacg cgctaaaaaa ggtatatata ccaaaaaatt
    13501 gccaaatacg gagtgactca aaggtaataa aaaaatacag tccaaggcta agtattgcaa
    13561 aacaaacaat aaacataaaa aatgttttga tattcatatt atatttaaag aaagggtagc
    13621 ttttcatttt tgtgcaccac ctaagatgtt ttagttaagc ttgatattga ttgatttcat
    13681 tacgcagttc ttccattagt tcttgcatat gcttatttgc gttcttgtat ctacgctctg
    13741 cattgtatac tcgaattagt ttttctgcgc gtgtatcttt atttatgata acaattcgat
    13801 agtaaggcat ccctctggag cctccattaa agcgaattaa tttagcatcg cattcgataa
    13861 gatattcgct ataaggatat gctttttctt tatagtaaaa agcttcttca ctaacagaaa
    13921 agttacttgg aaaaagcctc ttgaaaaata ctgagaacat gagggctatg acaaaaagaa
    13981 taacaaaata ttcccatggt accggaagtg tcattccaat tattataaaa gtaataaagg
    14041 taaagctaat cataattata agaagcacgg tacctatatt gatattgagt tctgaaaagc
    14101 gatatttttt catgaatatc tgccacctaa gctgttttat taaagaaatt ttagcactaa
    14161 aaataaacgt tgtctatctt agggaaattc aaaaaaacta ttgttcatgt ggaagctttg
    14221 ttgtataatg tagcttgctg taagtaaact tcgtgtttaa tattagtaaa cttctgtgac
    14281 ttgaggttta ctatcactaa acttgaaaga aaggacattg acatggaaat tggcaaacgc
    14341 ataaaaaatc ttaggctcag taagaatttg acacaagaag aattaggcga acgaacggat
    14401 ttgacgaagg gatatatttc tcagctagaa cgagatttga gttctccttc tatcgaaacg
    14461 ttatttgcta ttttggaagt gttaggttct actccgaaag atttctttga tgaagaagaa
    14521 cacaatcaaa aagtaattta cggagaacta gagcatactt tctttgaaga tgaagaaaaa
    14581 ggttacagaa ttaagtggct tgttccagaa tcgaatgaaa aagaaatgga accagtgcta
    14641 cttgaaatag aggcaaatag ctgttttaaa agcttcgaac catcactttc agaaactttt
    14701 gcctacgtgc taaaagggga agtgaccgtg ctgcttggtc gaaatgagta tgtagccaaa
    14761 aaaggggaag caatttattt ccacgccgca gatgaacatc aaataattaa tcgatcgaat
    14821 gaacaagcga cactcatctt agtagcgaca gagtcatatt tataagggag gtaaatgatt
    14881 gtgacagaaa caattattcg ttttgaaaac gtaacaaaac aatttgataa tgatccacca
    14941 gtgcttgaca atgtcagctt tgaaatagaa aaagggaagt tttatacttt acttggccca
    15001 tctggttgcg ggaaaacgac cattttgcgc ttaatagctg gatttttaga agcttcagag
    15061 ggacaaattt atctagggga taaagtaatt aaccaaattc cagccaataa acgtcctgta
    15121 aataccgttt tccaagatta tgcgttattt ccacatttaa atgtgtatga aaatgtggct
    15181 tttggtctgc gtattaaaaa gctaaaaaaa gatgcaattg acgaaaaagt aaaagaagca
    15241 ctgcgctttg ttaacttaaa aggctacgaa aaaagagaaa ttagcgaaat gtctggtgga
    15301 caaagacaac gtgtcgcgat tgcacgggca atcgtcaatg aaccagaagt tattttactt
    15361 gatgagccac tatcagcgct tgatttaaaa ctacgtacgg aaatgcaata tgaattgcgc
    15421 gatttgcaaa agcgtcttgg aattacgttt atttttgtga cacatgatca agaagaagca
    15481 cttgcgatga gtgatgaaat ttttgtgtta aataaaggcg aaattcaaca aagtggtacg
    15541 ccaattgata tttacgacga gccaattaat aaatttgtcg cagattttat cggcgaatcg
    15601 aacattgtta atggcaaaat gatacaagat ttcgaagtgg aatttgtgga aagacgtttt
    15661 gaatgtgtcg accaaggttt ccgcccaaat gaagtcgtgg aagtagttat ccgtccggaa
    15721 gatttagaga ttacttcggc tgaaaaaggt caactgcaag taaccgtaga ctggatgctt
    15781 ttccgtggtg tgcattatga agtaggttgt atcgacactg atggaaatga atggcttgtt
    15841 cacacaacga gaaaagttcg tgtgggtgat aagattggct tagcgtttga accagaggca
    15901 attcatgtta tgcgtctcgg ggaaacggag gaagaattcg ataagcggct tgatagctac
    15961 gatgaggtgc agtgatgaat agacgcaccc gtacagttta ccttgttcct tatgtacttt
    16021 ggattttact ttttgtagtc gcgccgattt tattaattgt ttattattct ttttttgatg
    16081 tagatggcaa ttttacggta gataattata ttcacttttt tacgcctgta tatttaaaaa
    16141 tgacggctag ttcgttctgg tacgcatttt taattactgt ttttacgttg ttgatttcgt
    16201 atccaacggc ttacttatta acgaaactaa aacataaaca attgtggttg ctacttatta
    16261 ttttaccaac ttggattaat ttgctgctta aagcgtatgc ctttattggg atttttggga
    16321 catacggggc ggcgaatcaa tttttggaaa taattggaat tggttcgaaa cagattttat
    16381 ttacggattt tagtttctta tttgtatcga cctatatttt tattccgttt atgatattac
    16441 cgatttttaa tgcaattgag gaaattaatc cgacgttgat tcaagcgtcg cgcgatttag
    16501 gcgcatctag tttgacaaca tttagacggg tgattttccc gctcactgct gatggcgtga
    16561 aatcagggtg tcaggctgtt tttattccag cactatcact ctttatgatt acacgattaa
    16621 ttgcaggaaa ccgcgtcatt acgctcggaa cagcgattga agagcatttc ctagtaacgc
    16681 aagactgggg aatgggttcg acaattggcg tatttttaat tattgcgatg attttaatta
    16741 tgttcctaac aggctcgaaa aagaaaagag gtgcgcgtaa atgaagaaaa gtaaatgggg
    16801 tacgatttat ttagtgcttg tttttgtgat tttatatgcg ccgattttct atttgatttt
    16861 ttactcgttt aataaaggcg gcacgatgca taattttagt ggctttacgc ttggctatta
    16921 taaagaagtt ttccaagata cgcgcctact aattattgtt ttaaatacat ttgtaattgc
    16981 gctgctttct tcggtgattg caactattat cggcgtttgc ggggcgctgg cgattaaatt
    17041 tatgccaaaa ccattcgcga aaaattcgct tttaagtttg aataatgtgt tgattgttag
    17101 cccggacgtt attatcggtg ctagtttctt gattttcttc acgattttag gcgtaaaatt
    17161 agggtttatt tccgtcctag tgtcgcatat tgcctttagt attccgattg tcgtattgat
    17221 gattttgccg aaattgcaag aaatgagccc gacgttaatg gatgcggcgc gcgacttagg
    17281 tgcaagccag tggcaagttc tttctaaggt tattttgccg tatattatgc caggcgtttt
    17341 agctggattt ttcatggcat taacgtactc gctagatgat tttgcggtga cgttctttgt
    17401 aactggaaat ggcttctcga cattggcagt ggaaatttat tcccgagcta gacaagggat
    17461 ttcgctttct atcaatgctt tgtcgacact gattttctta ttcacgatta ttctcgtgat
    17521 cggttattac tttatcaacc aacgtaatac aagtaaaaat attcggacgg gggcgacgaa
    17581 agaatgaagc aactgctgaa aatttttgtg ccagtcattg ttgtcgcact cctaatgatg
    17641 ctacttgcaa caacgatgaa ccgctctgag ggctatgctg ggagcaatac gctgactatt
    17701 tataactggg gcgattacat tgatccatcg ctcattacta aatttgaaaa agaaacaggc
    17761 atcaaggtca tttaccaaac atttgattct aatgaagcga tgatgacgaa aattgagcaa
    17821 ggtggaacga cctttgatat tgcggtgcca agtgattacg cgattagcaa aatgaaagaa
    17881 gaaaatttgt tgatcccact tgatcattcc aaattaccaa atgaaaaata ccttgatccg
    17941 cgttttatgg atttatcgtt tgatgatgat aataaatatt cgatgcctta tttctgggga
    18001 acgcttggca ttatttataa taaagaaatg ttcccggata aaaatttcga tacgtggaat
    18061 gcgctatttg atcccgaatt gaaaaaccaa attttgctga ttgatggggc gcgtgaagtg
    18121 atggggcttg ggctgaatag tctcggttac tcactgaacg atacgaataa agctcaccta
    18181 caagctgcca gagacaagct agaaacgatg acaccgaatg taaaagcaat tgttggcgat
    18241 gagattaaac ttctcatggc ggacaatgag gcgggtgtcg cggttacttt ctccggagaa
    18301 gcggcggaaa tgttaagtga aaatgaagat ttagaatacg taattccaaa agacggctcg
    18361 aatttatggt tcgacaacat ggtcattcca aaaacggcga aaaatgtcga tggcgcgcat
    18421 aaatttatta acttcatgct aaaaccagaa aatgccgcaa ttaacgctga atatgtcggc
    18481 tatgcaacac caaatgaaaa agccgtcaaa ttgttaccaa aagaaatttc tagtgatgaa
    18541 cgtttttatc cggatatgga tgaactgaat aatttagaag tatatgataa cctcggtaaa
    18601 cgaatgctgt cgtattataa tgaattattt ttggagttta agatgtatcg gaaataaagc
    18661 ttcatctcaa acaattagac tcttgtatta tgatacaaga gtcttttttt tacaattcct
    18721 tatttttgat tagaagaggc ttgatttgcg tatgaaaaca aattttcagt caaagtaaat
    18781 gagaatgctt tcctatcaat catgccgaca attttgtcgc tgtcatacaa atccaataaa
    18841 aattgggcca tttcatcact tgtatgataa ttattaaatt ttttgtcata gtcatagtcg
    18901 cttacatcat ttgctttttg tccaaattcg gttttggtag cagctggtgc taatactttt
    18961 gcttgaagtg gagagcagct ttctcgtagt tccaaactta atgcttcagt aaaggaacta
    19021 acatagaatt tactagcaca ataagttgct gcggcaggaa ccatcgtata gccgcctgct
    19081 gaagaaacat taattagctg tgtacctgat tggtcatgat actttctaac atacaagact
    19141 gatagaactg ttaatgcttc aatattcaaa tgaagaagtt gtaaagtctt agttaggctc
    19201 tggtttttaa cttcactata atatcctaga ccagcattat ttatccatgt ttcaatgaaa
    19261 taaggatcca attcagaaaa taatttctct aaacggtcta tttttgtcaa atcgatcgct
    19321 ttgattagga cttcaatttc gggtacttcc ttctcaatct catttttcaa cttcaacaaa
    19381 ttagcttctc ttctggcaat taagatgaga ttatttttgc gttttgcaaa ccctttagcg
    19441 gtagcatagc cgatgccgga actcgcacct gtgatgacaa catatttttt catggcaatt
    19501 cctcctagca tttagtatgg agtaactata aatgctggag ttaacaccat gtcaactctt
    19561 cttatacgag caaaaattat ttaatatctc gtgcactcaa catttcctta taaatatcta
    19621 ttttattcaa tagaaactga gtgtatagct caatttcttc ccttttctca actaaaacat
    19681 cgtattgctt atataacaaa gtcattcgtt gctcgatggt ttgatctccc agataccgaa
    19741 gttttgcata ttccttaata tctttaattg gcatgcctgt ctgctttaat ttttttatga
    19801 agttaatcca agtaatatcc gaactatcat aaattctacg gttaatctca tttctttttg
    19861 gtaaaattag tttttctttt tcataatatc gtaatgtatc aattgataac tccacttctc
    19921 ttgaaaatgc accaattgtg taattcacga gtaatcatct cctattttaa atggatatgg
    19981 tgttaactcc agcatactac ataaaaagga gcggggaaag atagtttgga atactcgtaa
    20041 gtccctttgc aagctgccag agataaattt ggatgagatt aaacttctca tggtggacaa
    20101 tgaaacggtt ggcacgtata aatttattaa ttcatgctaa actctgagaa taccacaatt
    20161 aatactgaat atgtcagcta cgcaacacca aatgaaaaag aagtcaaatt attacaaaaa
    20221 gaaatttcaa gtgatgaacc tgtttaccta tatatggata agattactag tttagaagt
//
LOCUS       DASDYO010000043        20153 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.043, whole genome shotgun sequence.
ACCESSION   DASDYO010000043 DASDYO010000000
VERSION     DASDYO010000043.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 20153)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20153)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20153
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.043"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            100..1947
                     /locus_tag="U0290_001316"
     CDS             100..1947
                     /locus_tag="U0290_001316"
                     /EC_number="3.5.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464375.1"
                     /note="catalyzes the hydrolysis of a monocarboxylic acid
                     amid to form a monocarboxylate and ammonia; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidase"
                     /protein_id="HEM2301361.1"
                     /translation="MKRRILLTITAVCTVFSIVGGYVFFTSQQTTTSENKSAVSKKKP
                     PTTKNEKPKQPPNKLTLGKNKENSHLEKNFGGKQLQVEGIDDRAFQSSLKKRTEIKLK
                     PEKAPPKKQDIKPVKPIPSKPEKEEDSSSPIYEKARIMTPINNQLDKLDLAVLEAKEP
                     LIIGADVTKLQQLIATKQLSYKELAGIYLNRIKKYDQNGLTLNAITEINPTIIAEAEQ
                     LDKDNSANKSALYGMPVLLKDNIGTKELPTSAGTVALKDWVIGEDATIVENLKANGAL
                     ILGKTNMSEWAAGMDEELPNGYSGKKGQSKNPYSSDLDPSGSSSGSATGATSDFAAIA
                     IGTETNGSIIIPASAQSAVGYKPSQGLINNKGIIPLSSRFDTPGPLTRTVNDAYLTTN
                     ALINTTSNPPLSTDSLQGKRIGLLADGESNEETAVIKKIKYDLKKAGAIIIEGVAVGE
                     FEQLDTDYALLLNADFKHDLNQFLNVNNAPMTTLESIIQFNQTNPARNMKYGQSELVK
                     SQQSTTTKLQADSLASNLIQEAQNELDSMLQKDKLDAVVTIGMGGSVTFLAPIAGNPE
                     LTIPAGYDEETNQPISLTFITARNSDTTLLNMGYSYEQQSKNRKSPNLK"
     gene            complement(1995..2723)
                     /locus_tag="U0290_001317"
     CDS             complement(1995..2723)
                     /locus_tag="U0290_001317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM2301362.1"
                     /translation="MTKLKVTGLKKSFGANEVLKGIDIEVKEGEVVCVIGPSGSGKST
                     FLRCMNNLEEITAGEVVVDDFNITDKKVDINKVRENIGMVFQHFNLFPHLSVLENITL
                     APVELKKMDKEAAKSNALRLLEQVGLREKAEEFPNQLSGGQKQRVAIARALAMDPDIM
                     LFDEPTSALDPEMVGEVLGVMKELAKGGMTMMIVTHEMGFAREVGDRVIFMDGGYIVE
                     EGKPADIFDNPTNERTISFLDKVL"
     gene            complement(2716..4158)
                     /locus_tag="U0290_001318"
     CDS             complement(2716..4158)
                     /locus_tag="U0290_001318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter substrate-binding
                     protein/permease"
                     /protein_id="HEM2301363.1"
                     /translation="MKKFSRFILMMAIACVAAFIFTGNGLNAKAAEETYLIGTDTTFA
                     PFEFEKDGEHVGIDMDILKAIAKDQNFKYEIKAMGFNAAVQALEANQVDGVIAGMSIT
                     DERKQKFDFSDPYFDSGVVMGILKDNDEIKTYDDLKGKKVAVKTGTEGYAFAEKIKDK
                     YDFDIVVFDDSAQMYDDVKTRNSVACFDDYPVLAYGVQTGNGLKIVTEKEKGNSYGFA
                     VNKGKNQELLEKFNAGLVNIKASGEYDKILENYLGKNAIKENTTEKGFMGIIKSSWPA
                     LLSGLWLTIRLAVVSLIIAFIIGITFGFMKVSNSKILRGIATVYVDIFRGTPLIVQAF
                     FFYFGIPAALDFRMPVFLAGVIALSLNAGAYMVEIVRGGIQSVDKGQMEAARSLGLPH
                     KKAMMKVVLPQAIRMMIPSFINQFVITLKDTSIMSAIGLVELTQSGKIIMARTFESTW
                     TWLIIGIMYLIVITILTKISDRLERRLRND"
     gene            complement(4328..5428)
                     /gene="uvrC"
                     /locus_tag="U0290_001319"
     CDS             complement(4328..5428)
                     /gene="uvrC"
                     /locus_tag="U0290_001319"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit C"
                     /protein_id="HEM2301364.1"
                     /translation="MDDKLQKKLTLLPESPGCYIYRDENNEILYIGKSKCLKNRVKSY
                     FHSKQIGKTARLVRQIRDLELIITTSEKEALLLEMILIQKYQPPFNIQLKEGTSYPYI
                     KITNEKNPHIEVVFEVKRDGAHYFGPYPGRFSARQTVDLIEKLFPLCRCDGKPGRPCL
                     YYHLGLCLGPCQAEIDPVVYKKQIHKISRFLEGDVKNVKDKLLGDMLTATENLEFERA
                     AELRDKIHAINETIEKQHIIFPGLKNRDIIGCYEQDNHLSVFVFFVRNGAINGSKWHV
                     FQIEKSLQEDLAKFLNQFYKDPNNIRPKELLIAEKIDKSLLNEQLRKACLFPQKGGKK
                     KQVDLAIENAKSAYIAYAKMKEYDFEIQLNNH"
     gene            complement(5533..6636)
                     /locus_tag="U0290_001320"
     CDS             complement(5533..6636)
                     /locus_tag="U0290_001320"
                     /EC_number="2.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-methyltetrahydropteroyltriglutamate--
                     homocysteine S-methyltransferase"
                     /protein_id="HEM2301365.1"
                     /translation="MNQLAPFYADHVGSILRTKGIKDAREKFQSGEITVSELRKIENT
                     EIKYIVEKQKEVGLKSITDGEFRRAWWHFDFLENLDGVEGYDAAGGIQFSKVQTKSHS
                     VKITGPIDFTTHPFIEDFIFLKEAVGDKHVAKQTIPSPAMLHYRGDIEYQPYLDDAEK
                     FAKDLAVAYQKAIQAFYDAGCRYLQLDDTSWSYLCSDEQREVVRQRGFDPDTLQETYK
                     NLINDAIKYKPADMVITMHICRGNFRSTWIAEGGYGPVAETLFGKLNIDGFFLEYDNE
                     RSGDFAPLKNVTRPDLKIVLGLITSKTGELEDEAAIKARIEEASEIVPLSQLRLSPQC
                     GFASTEEGNILTEEEQWDKLRYVVRLAKDIWGE"
     regulatory      complement(6731..6828)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            complement(6893..7270)
                     /locus_tag="U0290_001321"
     CDS             complement(6893..7270)
                     /locus_tag="U0290_001321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RidA family protein"
                     /protein_id="HEM2301366.1"
                     /translation="MAKEIIQTSSAPKALGPYSQAVKVNGLIFTSGQLGINPETGELA
                     DGTTKQAEQAFKNIAAVLAEAGSGLDKIIKATVFFKDLNEFKAVNEVYATFFSSDFPA
                     RSAFQVAKLPLDAAIEIEVIAEA"
     gene            7349..7606
                     /locus_tag="U0290_001322"
     CDS             7349..7606
                     /locus_tag="U0290_001322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1294 domain-containing protein"
                     /protein_id="HEM2301367.1"
                     /translation="MILTIYLIAITLVSFLLFAVDKRKAIKHAYRIPESVLLFTAFLG
                     GAFGSWMSMQLFHHKTQKPKFRILVPLAMVWTVGMVIWWLY"
     gene            complement(7744..13827)
                     /locus_tag="U0290_001323"
     CDS             complement(7744..13827)
                     /locus_tag="U0290_001323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterial Ig-like domain-containing protein"
                     /protein_id="HEM2301368.1"
                     /translation="MIKATRARHYLVLLMAFFLVLGQLNLTALKVFAKENGNDELTYE
                     VQSKLAEDKKSADLTIKVTPKNDQVKILTIETPDGEKKEGQEVSYKAEKNGTTNFLIN
                     YQDASEEKAETKKYTASYEVNDIVSDDEANKDNTTEKVTEKEADNIQPPSTKDSNKNL
                     KSLKAGQTTVDLKIPDYDQTAWANGDIKEVTATVNFGDNTSTGKKVNFTLPDGMRFVS
                     LPVPSNYQAGSNVDKGVLSHLGASDPLGIAITSVKVPDKEKAYNQATFGTVSYELSPG
                     TEKASFTFSVRVDAAKYYGAVDLATPIKTEIFMGETTSPVASAEQAIHAEGNKVVGYT
                     NQDHVKTMFRTWYSNQRLTEVLASTDTTDSYNYTKSYSVVNGLNNLDNRGSAYYLAKN
                     IEMTLYYPEGMEFVNVVNHGGTPLTDNSNLTITNYPSENKVVVDCKQLNFNSANNSIY
                     GVKYKVPKGTPVGTYSTAKAPHAVITTYDGEVFETDALTNNTNDLTTLAPLDTCKVVD
                     TSNNKMNLFSANGTINPDNETWAGSIQIDNKRTSGVKKNQMYHIEFDPNWEAYMVNIP
                     FDSTISENKITDVQYKTNLNDTFRTYEGALTKNNNQMYRLDANAVELQEGEYFTEVKA
                     NVGDFSPGYQNTEASATYRWNSTVSYGKVKPGITSVQYKGSIWDADDEAETKSSATST
                     YSVLNTESTAANGTAAFYDKAGNVVKTASPGETIKTKATLLLSDYPYGTRTVLNNPEV
                     YLRALEGTKVLPSSIKLTDQDGKDVNFSIQQETANNGDKVYVLKTTDVSVGAFTGYPA
                     KSKFLNISYDTTFDVTLAKSINMDAQEVLAWGGPNVASAIANNNFSDVGLDVNKNGKD
                     NEKLLSVNSSTLSVPKQDTVAVETFLSIAGEGEKAAYTEGDDSTVSYFTPGTDAEYTV
                     QITNASNGEATTFELYIPIPKTGQNFGEKFQSEAFKWDMKLNSALAINDEQKNQFEVS
                     YATQANENNYDSTSIYTETVSDYEKVNMVRIKVKTQINAGEAQTFKVPLKVDETFDSA
                     TEGNKIGERDVYNPFYRVITNTFSGSLSGTKVGAELVIGEVSGTLFNDKDVNGIYEKA
                     KGDEPLANETVELYKWNDATSNYEPAKKAGENVTTKTNSDGKYSFDYNSGVGYGNYAV
                     KFPDKAGYQFTLKNVGKDVTLDSDVPYSGAEKGWNKEIDPTQPNAQYINAGYYAYNPT
                     QDLKVNLNEKQVQMGRSLEITLPKVASTTGQAAEDTIEPSFFKNIKAATNGYKWTVAD
                     TNVATVQTLADGSAAVVGVSTNNKTIDVTDLTITIQDIFGTEQSSTAPVYVTGTEGQV
                     AQQDGYTMGATDFSMEYKEATELTKAQALTLAKTAAFEEVKDGVNSSAEDRLDSVQVS
                     QTQLDAIKNGSNQGSVYPLTYSITKDSKTVSVTIQVTVAKDLTAVNAHDSTIYIGDAW
                     EAKDNFDSATNKEGATDIAFSDVTVTGSVNTAVAGVYPVTYTYNGVSKKINVTVKAIK
                     TAVNAHDSTIYTGDTWNARDNFDSALDKDGNSVAFADVTVTGSVNTNETGTNTITYSY
                     DGVSQTITVTVVENKEGISAHDSTIYAGESWNAKDNFDSAFDKDGNAVDLEDVTVTEK
                     PTVDTTKAGAYEVTYKYGKVSKKITLTVKAKLTAVNAHDSAIYIGDTWSAEDNFDSAL
                     DKDGNSVAFADVEVKGTVDTDKAGTYPVTYTYDGVSKTINIQVKDILTAVNAHDSEIY
                     IGDNWNAKDNFDSAQDKDGNTVNWNEINVSENPAVDLETVGVYQVTYSYGGVSKTINL
                     TVHPRKTSLEVHDSTMYTGDKWKAEDNFDNATDKKGDQIPFKDVTVTGQVDSKTAGTY
                     EISYIYDGLKKVARITVIKNQAQITVKDSVIPYGGKWEAEANFIGATNRDGVAIPFSK
                     IKVDGTVDVNKAGTYKVIYTYDPNEGTADAGKKELSVTANIQVEAEFVKPIKPVDPSK
                     PTDPKKPSTEKTPLKVVDNKQHTATYEAAKPLPKTGDQTNNWVIWTGICLLSMSMLLW
                     VVMRGRKKNYQ"
     gene            complement(14279..16921)
                     /locus_tag="U0290_001324"
     CDS             complement(14279..16921)
                     /locus_tag="U0290_001324"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="calcium-transporting ATPase"
                     /protein_id="HEM2301369.1"
                     /translation="MEIYRKSAAETFTQLEATEQGLTTSEVTKRQEKYGFNELKNKKK
                     DPLWKLFLETFKDPMVIVLVVAALVQLVLGEVVESLIIFLVLIVNSIISVVQTRKAES
                     SLDALREMSAPVAKVIRDGSKQSIHARELVPGDVVILDAGDFVPADGRLFESGSLKID
                     EGMLTGESEAVEKYIDTIPDEVGLGDRVNMVFSGSLVVYGRGMFVVTGTASETEIGKI
                     AGLLETAEAKQTPLQRKLESFSKKLGLGILALCVLIFAVEAGRVLLGDNSADMATAIL
                     NAFMFAVAVAVAAIPEALSSIVTIVLAVGTNKMAKQHAIIRKLPAVETLGSTSVICTD
                     KTGTLTQNKMTVVDYYLPDGTKENFPESPENWSEGERRLIHIAVLCNDSNINSEGKEL
                     GDPTEVALIAFSNKNNQDYNEIREKFIREGEIPFDSDRKLMSTLHTFNGNKAMLTKGG
                     PDVMFARCSYVFLDGEEKPMTEEILAKLKETNEEFSNQALRVLAYGYKRMPADTTELK
                     LEDEQDIVLVGLTAMIDPPREAVYASIEESKKAGIRTVMITGDHKTTAQAIGRDIGLM
                     DADDIALTGQELDAMPEEELDKKLEHIAVYARVSPENKIRIVKAWQKKGKITAMTGDG
                     VNDAPALKQADIGVAMGSGTDVAKDSAAMILTDDNFVSIVDAVGVGRTVFDNIKKSIA
                     YLFAGNLGAIIAILFALVLDWINPFTALQLLFINLVNDSLPAIALGMEKAEPDVMKRK
                     PRDINEGIFAGGTMRAVISRGVLIGIAVIISQYIGLQISPGMSVAMAFTTLILARTLQ
                     TFAARSNVQTAFGAGFFSNKYVIGAVLLCFVLYGITVLPGAREIFSIPASFGLHEWSI
                     AAGLALAAVVMMEIIKLVQNKFFK"
     gene            17123..17593
                     /locus_tag="U0290_001325"
     CDS             17123..17593
                     /locus_tag="U0290_001325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2301370.1"
                     /translation="MDKNEQVMANVRDLFNKLAWINKVKMEKALEGYKPSEVHCIEYI
                     AKNEDPNVTKLAEAFYMTKSAISKITKKLMDKGYIESYQKPENKKEIYFRLTAKGAEI
                     NQVHDDLHQEFLDRDKVVFEDVTDAQYAEVLKFVDKYSRHLDNEMQKVYNQKSE"
     gene            17723..18934
                     /locus_tag="U0290_001326"
     CDS             17723..18934
                     /locus_tag="U0290_001326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetracycline resistance MFS efflux pump"
                     /protein_id="HEM2301371.1"
                     /translation="MSSTKSIINKKTLLFGLISVFLCGMGFSIIMPVVPFLVTPYVTN
                     ASDQALMVTLLTSVYALCVFFAAPGLGALSDRFGRRPVLLICFIGSAIGYFIFGLGGA
                     LWVLFLGRIFEGITGGSISTLFAFFADITPQEERTKYFGWVSAAAGAGAALGPAFGGL
                     LAHFGYAMPFFFGAAITFINFLFGYFYMPESLEEANRLKRIPLMRLNPFSQLLKILTI
                     KNLGRLLIAAFFIWVPNGSLQAVMSQFAIDSFSWKPVLIGMMFSIMGIQDILSQAFVM
                     PKLLLKLTDKQIAILGMIAEIIGYLLIAASSIFTLAPLLVIGMFVFGFGDSIFGPSFN
                     GMVSKSASASEQGRIQGGSQAIQSVARIIGPVIGGQLYITLGHAAPAIMGVLLITVAI
                     FILYKKTSLAK"
     gene            complement(19042..>20153)
                     /gene="hpt"
                     /locus_tag="U0290_001327"
     CDS             complement(19042..>20153)
                     /gene="hpt"
                     /locus_tag="U0290_001327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hexose phosphate transporter Hpt"
                     /protein_id="HEM2301372.1"
                     /translation="KKIMSFLLGISAIISIIIGILLVTKQATVGILFILWGANGFVQS
                     PGGPASYSTITRWTPKLKRGRWLGFWNASHNIGGALAGIVAFWGATTFFNGGAGGMFI
                     VPGIIAIIIAIICFSVGHDEPEELGWNSAAEIFEEREEQGESETKDLSRFQILCRFVI
                     NNPWVWTLCVINIFIYIVRIGIDNWAPVYCIQALGWSTKDAIMTISFFEIGALLGSLS
                     WGWLSDIMKGRRMLCSIIAVVIEFFMLISYSQVTSVYSMYTVLFILGFLVFGPQLLIG
                     VSVIEFVPRNALAVTNGLTGTFAYLFGDSFAKVFLGYIADPTKAGIQIFGYTLHGWGA
                     TFTIMFTALIIAGLMMIPVALKQEKIIRQAKVLHL"
BASE COUNT         5740 a         4125 c         3499 g         6789 t
ORIGIN      
        1 cctttttaaa aaatttttta gttttcacaa aattgtcact gatttacttt ttttgatgct
       61 atataattaa attacatatt taaacatcgg aggaatcgca tgaaaagacg cattttatta
      121 acaatcaccg cagtttgtac agtttttagt atcgtcggtg gctacgtatt ctttacgagt
      181 caacaaacta ctacatcaga aaataaaagt gctgtttcta aaaaaaagcc accaaccaca
      241 aaaaatgaaa aaccaaaaca accaccaaac aaattaacac ttggcaaaaa taaagagaac
      301 tcccatttag aaaaaaactt cggaggtaag caattacaag tcgaaggtat agacgaccga
      361 gctttccaaa gttcgctcaa aaaaagaacc gaaattaaac tgaaaccaga aaaagcacca
      421 ccaaaaaaac aggacattaa accagtaaaa ccaataccaa gcaaaccgga aaaagaagaa
      481 gattcatcta gtcccattta tgaaaaagcg cgtattatga cgccgattaa taatcaatta
      541 gataagttag atttggctgt tcttgaagca aaagaaccac ttatcattgg tgctgatgtt
      601 acaaaactcc aacaactcat tgcgacaaaa caacttagct acaaagaatt agccggtatt
      661 tatttaaatc gaatcaagaa atatgaccaa aatggcctaa ctctaaatgc aataaccgaa
      721 atcaacccca ctattattgc ggaggcagaa caactagata aagataattc agccaacaaa
      781 tctgctttat acggtatgcc agtcctttta aaagataaca tcggcacaaa agaactcccc
      841 acaagtgctg ggactgttgc tttaaaagat tgggtaatcg gggaggacgc tacaattgtt
      901 gaaaatctaa aagcaaatgg tgctttaatt ctcggaaaaa ccaatatgtc tgagtgggca
      961 gctggaatgg acgaagaact tccaaacggc tactcaggta aaaaaggcca aagcaaaaat
     1021 ccttattcgt cggacttgga tccctctggt tcgagttctg gatccgctac tggagcaaca
     1081 agtgattttg cagcaattgc aatcggtaca gaaacaaatg gttcgattat tatacctgcg
     1141 tctgctcaat ctgctgttgg gtataagcca tctcaaggtt taataaataa caaaggtatt
     1201 attcccttat caagcagatt tgatacaccc ggaccactaa caagaactgt taatgatgcc
     1261 tatttgacga caaatgctct aataaatact acttccaatc caccgctttc tacggattct
     1321 cttcaaggta aacgtatcgg tcttttagcg gatggcgaaa gcaatgaaga aacagcagtt
     1381 ataaaaaaaa taaaatatga tttgaaaaaa gcaggtgcta ttatcattga aggtgttgca
     1441 gtaggtgaat ttgaacagtt agatactgat tatgccttat tactaaatgc tgactttaaa
     1501 catgatttga atcagttttt gaatgtgaac aacgctccca tgacgacgtt agaatcaatt
     1561 attcaattta atcagaccaa cccagcgaga aatatgaaat acggccaatc cgaacttgtc
     1621 aaatcacaac aaagcacaac tacgaagcta caagcagaca gtttggcgag taatttgatt
     1681 caggaggcgc aaaacgaact tgactctatg cttcaaaaag ataaactgga tgcggtcgta
     1741 acaattggca tgggaggttc cgtgacgttt ctagcaccca ttgcaggaaa cccagaactg
     1801 actatcccag ctggctatga tgaagaaaca aatcaaccga ttagcttaac ttttattaca
     1861 gctagaaata gtgatacaac cttattaaat atggggtatt cctatgaaca acaatcgaaa
     1921 aacagaaaaa gtcctaattt aaagtaaaaa aagcaagatg cttttggaaa ttccaaagtc
     1981 atcttgcttt ttgtttataa tactttatct aagaaactaa tcgttctttc gttggttggg
     2041 ttatcaaaaa tatcagccgg cttgccttct tcaacaatat agccaccatc cataaagata
     2101 actcggtcgc caacttcacg agcaaaaccc atttcgtgtg taacaatcat catcgtcatg
     2161 ccgcctttag ctaattcttt cataacgcct aaaacttccc ctaccatttc tggatcaagc
     2221 gctgacgttg gctcatcgaa caacataata tcaggatcca ttgcaagtgc tctcgcaatc
     2281 gccacccgtt gtttttgtcc accagacagt tgattaggaa attcttctgc tttttctcgt
     2341 aagccaactt gttctaataa acgtaaagca ttacttttcg cggcttcttt atccattttt
     2401 ttcaattcaa caggtgctaa tgtgatattt tctaaaacag acaaatgcgg gaaaagatta
     2461 aaatgttgga aaaccatgcc gatattttcg cgaactttat tgatgtccac ttttttatcc
     2521 gtaatattaa aatcatcgac cactacttcg ccagcagtaa tttcttccaa gttattcata
     2581 caacgaagaa atgtactttt accagatcca gaaggtccga tgacacaaac tacttcgcct
     2641 tcttttactt ctatatcaat gccttttaag acttcatttg cgccaaaact ctttttcagt
     2701 ccagttactt taagtttagt catttcgtaa tctcctttct aaacgatcgg atattttcgt
     2761 taaaatggta ataacgataa ggtacataat tccgatgatt agccatgtcc aagtactttc
     2821 gaatgtacgc gccataatga ttttacccga ttgtgttagt tcgacgagtc caatggccga
     2881 cataattgat gtatctttaa gcgtgataac aaattggtta ataaaggatg gaatcatcat
     2941 tcgaattgct tgcggtagaa caactttcat catagctttt ttatgtggta aaccaagact
     3001 tcttgctgct tccatttgtc ctttgtcgac tgattgaata ccaccgcgaa cgatttcgac
     3061 catgtaggca ccggcgttca agcttagcgc gataaccccg gctaagaata caggcatcct
     3121 gaaatcaagt gctgctggaa taccaaagta gaagaagaat gcttgtacaa ttaatggtgt
     3181 tccacggaag atatcgacat aaacagtcgc aatcccgcgc aagattttgc tattgctcac
     3241 tttcataaat ccgaatgtaa tcccaataat gaaggcgatt attagcgaaa ctacggctaa
     3301 tctaatcgtc aaccacaaac cggataatag tgctggccaa gaagatttaa taattcccat
     3361 aaagcctttt tcagttgtat tttctttaat cgcattttta cctaagtagt tttctaaaat
     3421 tttatcatat tcgccgcttg ctttaatatt aactaatcca gcattgaatt tctctaaaag
     3481 ttcttgattt ttgcctttgt tgacagcaaa accataggag tttccttttt ctttctcagt
     3541 aacaattttt aaaccgttac ctgtttgaac gccgtaagct agtacgggat aatcatcaaa
     3601 acatgctaca gaatttcttg ttttaacatc gtcatacatt tgagctgagt catcaaacac
     3661 aacgatatca aagtcgtatt tatctttgat tttttctgcg aaggcgtaac cttctgtacc
     3721 tgttttaaca gctacttttt ttccttttaa gtcgtcgtaa gttttgattt cgtcgttatc
     3781 tttcaaaatc cccataacga caccagaatc aaagtatgga tcggagaaat caaacttttg
     3841 cttacgttcg tctgtaatac tcatcccagc gataacaccg tctacttggt tagcttctag
     3901 tgcttgtacc gctgcattga atcccattgc tttaatttca tatttaaaat tttggtcttt
     3961 tgcaattgct tttaggatgt ccatatcaat tccgacatgt tctccatctt tctcaaattc
     4021 aaaaggtgca aaggttgtgt ctgtaccaat caagtaagtt tcttccgcag cttttgcatt
     4081 taacccgttt cctgtgaaaa taaatgcggc aacacaagcg attgccatca ttagtatgaa
     4141 gcgtgaaaat ttcttcatat tgtgtcctcc ctctatatgt gtttaacttt aattaaatgt
     4201 tttatgtagc ataaattttt tccgtactcg taagatttta ccataagggt aggttattga
     4261 ccatagttat ttaagataag attttcaaca caacaaagag aagaagctaa tcgttaaaaa
     4321 ttagcttcta atgattgttt agttgtattt caaaatcata ttctttcatt tttgcgtatg
     4381 caatataagc acttttcgca ttttcgatag ccaggtctac ttgtttcttc ttaccgcctt
     4441 tttgtggaaa taaacaagct tttctaagct gctcattcag taagctctta tctatttttt
     4501 cagcgattaa caactctttt ggtcgaatat tgttaggatc tttataaaat tgattgagaa
     4561 atttggctaa atcttcttga agggattttt caatttggaa aacgtgccat ttacttccat
     4621 taattgcgcc atttcgaacg aagaaaacga agacacttaa atggttatct tgttcatagc
     4681 aaccaatgat atcccgattt tttaggccag gaaaaataat atgttgcttt tcgattgtct
     4741 cattaatagc gtgtatttta tctcgaagtt ctgccgccct ttcgaattca agattttcgg
     4801 ttgcagttaa catgtccccc agtagtttat ccttcacatt tttcacgtcg ccttcaagaa
     4861 aacgactaat tttatggatc tgttttttat aaactaccgg atcaatttcg gcttggcatg
     4921 gacctaagca caatccaaga tggtagtaca aacatggtcg tcctggctta ccgtcacatc
     4981 gacaaagtgg aaacaatttt tcaattaggt ccaccgtttg tcttgcggaa aaacgacctg
     5041 gataaggacc aaaataatgc gcgccgtctc gctttacttc aaacacaact tcgatatgcg
     5101 gatttttttc gttcgtaatt ttgatatatg ggtagctcgt tccttctttt agctggatat
     5161 taaaaggtgg ctggtatttt tgaattaaga tcatttcgag tagtaaagct tctttttcgg
     5221 aggttgtaat aattaattct aaatctcgaa tttgcctaac aagtcttgca gttttcccaa
     5281 tttgtttgct atgaaaataa gactttacac ggtttttcaa acatttagat ttaccaatat
     5341 aaagaatttc attattttca tctctataaa tataacaacc tggtgattca ggtaataagg
     5401 tcaatttctt ttgtaattta tcgtccaaag ggctccccct ccttctagaa catctattct
     5461 atccctagtc atcctttttg taaagacaca aaaagaacta gcacaaactc ttcggctagt
     5521 tctcctcatt tattattcgc cccagatatc tttcgcaagc cggacaacat atcgcaattt
     5581 atcccactgc tcttcttccg tcaaaatatt gccttcttct gtcgaggcga aaccgcattg
     5641 cgggcttaag cgcaactggc ttagaggcac aatttcactc gcttcttcaa tccgtgcttt
     5701 aatggctgcc tcgtcctcta attcacctgt tttggatgta attaagccta gaacgatttt
     5761 caagtctgga cgggtgacat tttttagtgg cgcaaaatct ccagaacgtt cattatcata
     5821 ctccaaaaag aaaccatcga tatttagttt gccaaataac gtttctgcaa cggggccata
     5881 gccgccctct gcaatccaag tggagcggaa attcccacga caaatgtgca tcgtaatgac
     5941 catatcagct ggtttatatt tgatagcatc attgataaga tttttatatg tttcttgtaa
     6001 agtatctggg tcaaaacctc tctggcgaac gacttcacgc tgttcatcag agcataaata
     6061 actccacgac gtatcatcta attgcaagta ccgacaaccg gcatcataaa atgcttgaat
     6121 cgctttttga tacgcaacag ctaaatcttt ggcaaacttc tccgcatcat ctaaataagg
     6181 ctgatactct atatccccac gataatgaag catcgctggg cttggaatag tttgtttcgc
     6241 gacatgcttg tcacccacag cctctttaag aaaaataaaa tcttctataa atggatgtgt
     6301 cgtaaagtca attggtccgg taatttttac cgaatgtgat tttgtttgga ctttgctgaa
     6361 ttgaatacct ccagccgcat cgtacccttc taccccgtcc aaattttcca agaagtcaaa
     6421 atgccaccac gcacgacgaa attcgccatc tgtgattgat tttaagccca cttctttctg
     6481 tttttcaacg atatatttaa tttctgtatt ttcgattttg cgcaactctg agactgttat
     6541 ttcaccactt tggaatttct ctcgtgcgtc cttaattccc tttgttctta atatacttcc
     6601 cacatgatct gcataaaatg gtgctagttg attcattttc ttcgcctcaa ttctcattat
     6661 ttttatgtat aaaaaaactt tcccttaaaa gacagctttt aagggaaaga gtaatttacc
     6721 tgattcgcgt gccttatctg tcagtgttac ctgctggatt tggcaccgtg aaacttccgg
     6781 ttgccaaggc ttcacggggc cagaaccctc cacctttctt gataagttgc tatgtaattg
     6841 gttcttatta tatcgtttat ttcttgtggt tgtcaaattt atttctgaat atttatgctt
     6901 ctgcgataac ttcgatttca attgcagcat caagcggtaa ttttgctact tggaaagcac
     6961 ttctcgcggg aaaatcacta gaaaagaatg tcgcatacac ttcattcacg gccttaaatt
     7021 catttaaatc tttgaagaaa acagttgctt taataatttt gtccagtcca gaaccagctt
     7081 ctgctaatac tgctgctata tttttaaaag cttgctcggc ttgttttgtc gtgccatctg
     7141 ctaattcgcc ggtttccggg ttaataccga gttgacctga tgtaaaaata agtccattca
     7201 cttttacagc ttgcgagtat ggtccaagtg cttttggggc tgacgatgtt tgaataattt
     7261 cttttgccat tttatccctg ctttctttta tggtatgctt ttattctaat caataaagtt
     7321 tgttttagca atgaaggggg atttctaaat gattttaacg atatatttaa tcgcgataac
     7381 gcttgtttct tttctattat tcgctgttga taaacggaaa gcaattaaac acgcttaccg
     7441 gatacctgaa tctgtactgc ttttcaccgc ttttcttggt ggggcgtttg gtagctggat
     7501 gtcgatgcaa ctatttcacc ataaaaccca aaaaccaaag ttccggattt tagtgccgct
     7561 tgcgatggtt tggactgttg gaatggtgat ttggtggttg tactgaatta acaaatcagt
     7621 agcattacct caaaaaaaca tcaattaact tctatatttc tcgataaaaa aataccgacc
     7681 agaaaaatct ggtcggtatt tagtttacct tcttattgtc tttcctttat ctgttggttc
     7741 ctcttactga tagtttttct ttcttcctct cattaccacc catagaagca tgctcatact
     7801 tagcaagcaa atgcctgtcc agattaccca attatttgtt tggtctcctg tttttggtaa
     7861 tggttttgct gcttcatatg ttgcagtatg ttgcttgtta tcaactactt tcaatggtgt
     7921 tttttctgtt gatggttttt taggatctgt tggttttgat gggtcaactg gttttatagg
     7981 ttttacaaat tctgcttcta cttgaatatt agctgtaaca gaaagttctt tcttacctgc
     8041 atccgctgtt ccttcattcg gatcatacgt ataaatcact ttgtacgtac cagctttatt
     8101 tacatctact gtaccatcta ctttaatttt ggagaaagga attgctacac catctcggtt
     8161 tgtcgcacct ataaaattag cttctgcttc ccattttcct ccgtatggaa tgacgctatc
     8221 ttttacagtg atttgtgctt gatttttgat tacagtaatt cgtgctactt ttttcaatcc
     8281 atcatagata tagcttattt catacgtgcc tgctgtttta gaatcaactt gtccggttac
     8341 agttacatct ttgaaaggaa tttggtcacc ttttttatct gtagcattat caaagttgtc
     8401 ttctgctttc catttatctc ctgtatacat tgtggagtca tggacttcta gacttgtttt
     8461 tcttggatga acagtcagat taattgtctt cgaaacaccg ccataactat aagtcacttg
     8521 gtaaacacca actgtttcta aatcaactgc tggattttcc gaaacattga tttcattcca
     8581 atttactgtg tttccgtctt tatcttgggc actgtcaaaa ttatctttgg cattccagtt
     8641 gtcccctata taaatttcag aatcatgcgc gttcaccgct gttaagatgt cttttacttg
     8701 gatattaatt gtttttgaga caccgtcata tgtgtacgtg actggatatg ttccagcttt
     8761 gtctgtatca acggttcctt taacttcgac atcagcaaaa gcgacagaat tgccatcttt
     8821 atccagcgca ctgtcaaagt tatcttctgc actccacgta tctccgatgt aaatcgcgga
     8881 atcatgtgcg ttgactgctg ttaatttagc tttcactgtt aaagtgattt ttttcgatac
     8941 ttttccatat ttgtaagtga cttcgtaagc acctgctttt gttgtatcaa cggttggttt
     9001 ttctgtgact gtaacgtctt ctaggtcaac cgcattccca tctttatcaa aagcgctgtc
     9061 gaaattatct tttgcattcc atgattctcc tgcatagatt gtagaatcat gtgcactgat
     9121 accttcttta ttttctacaa cagtaactgt aatagtttga gaaacgccat cgtagctata
     9181 agtgatagta tttgtaccag tttcatttgt attaacgctt cctgtcactg ttacatcagc
     9241 aaaggcaaca gaattaccat ctttatcaag cgcactatca aagttatctc tcgcattcca
     9301 tgtgtcacct gtatagattg tggaatcatg tgcgttcact gctgttttta tagctttgac
     9361 agtaacatta atttttttag agacgccatt gtaagtgtag gtcactggat aaacaccggc
     9421 tactgctgta ttcacacttc ctgtaactgt cacatcgcta aacgctatat cagtggcacc
     9481 ttctttattt gtcgcactat caaagttgtc ttttgcttcc catgcatctc ctatataaat
     9541 agtagaatca tgtgcgttca ccgctgttaa atctttcgct accgttactt gaatagttac
     9601 tgagacagtt ttgctatctt tagttatcga gtaagttaat ggatacacac taccttggtt
     9661 ggaaccattt tttattgcat ctagttgtgt ttgactcact tgtactgaat ctaaacgatc
     9721 ttctgcgctt gaattaacac catcttttac ttcttcaaaa gcggctgttt tcgcgagagt
     9781 tagtgcctga gctttcgtta attcagtggc ttctttatac tccatcgaaa agtcagtcgc
     9841 acccatagtg taaccgtctt gttgcgcaac ctgtccctcg gttccagtaa catatactgg
     9901 agctgtggag ctttgttctg taccaaaaat atcttgaatt gtaatcgtta aatccgttac
     9961 gtcaatcgtt ttattgtttg tggaaacacc tacgacagca gctgatccat cagctaacgt
    10021 ttgtactgtc gctacattgg tatctgcaac agtccatttg tagccatttg ttgctgcttt
    10081 aatattctta aagaagcttg gttcaatggt atcttcggca gcttgtccag tggttgaagc
    10141 tacttttggt aaagtgattt ctaagctgcg acccatttga acttgttttt catttaagtt
    10201 aacttttaaa tcttgcgtag gattataagc atagtatccc gcattgatat attgtgcgtt
    10261 tggttgtgtt ggatcaattt ctttattcca acctttttct gcaccgctgt atggtacatc
    10321 actgtctaat gtgacatctt ttcctacatt tttcaacgta aattgataac ctgctttgtc
    10381 tgggaatttc acagcataat taccatagcc tacaccagaa ttgtaatcaa agctgtattt
    10441 cccatcacta ttagttttag tagttacatt ttctcccgct ttcttagcag gttcataatt
    10501 agaggttgca tcattccact tataaagctc cactgtttca ttagctaatg gttcatcacc
    10561 ttttgctttt tcataaatcc cgttaacatc tttgtcatta aataatgttc ccgaaacttc
    10621 gccaatgaca agttcagccc ctacttttgt tcctgataat gaaccagaga aagtattggt
    10681 tattactcgg tagaaaggat tgtaaacatc acgttcacca atcttattcc cttccgtcgc
    10741 agaatcaaaa gtttcgtcta ctttaagtgg aactttgaaa gtttgtgctt ctccagcatt
    10801 aatttgcgtt tttactttaa ttcgaaccat atttactttt tcataatctg acactgtctc
    10861 tgtataaata ctagttgagt cataattatt ttcattggct tgcgttgcat agctcacttc
    10921 aaattgattt ttctgttcgt cattaattgc aagtgcgcta tttaacttca tgtcccactt
    10981 aaatgcttca ctttggaatt tttctccgaa gttttgacca gtttttggga ttggaatata
    11041 aagttcaaaa gtggttgctt ccccattaga tgcgttagtg atttgaactg tgtattcagc
    11101 atctgttcct ggtgtgaagt aagaaactgt actatcatcg ccttcagtat aagctgcttt
    11161 ttctccttct ccagctatgc tcaagaaagt ttccactgca acggtgtctt gttttggaac
    11221 acttaaagta ctactgttaa cagaaagtaa tttttcattg tctttgccat ttttattaac
    11281 atctagacct acatctgaaa agttattatt ggcaattgcg gaagcaacat tggggccgcc
    11341 ccatgcaagg acttcttgtg catccatatt gatactctta gctaatgtta catcaaatgt
    11401 tgtgtcgtaa ctgatattta gaaatttact cttagccggg tatcccgtaa atgcccctac
    11461 ggaaacatcc gttgtcttta atacataaac cttatctcca ttatttgccg tttcctgctg
    11521 aatggagaaa ttaacatctt tcccatcttg gtctgtcagt ttaatagaag aaggcagaac
    11581 ttttgtacct tctaaagcac gtaaatatac ttctggatta ttgagtacag ttctagtccc
    11641 ataaggatag tctgataaaa gtaatgttgc ttttgtttta atggtttctc ctggactagc
    11701 tgtttttact acattaccag ctttatcgta gaaagcagcc gtaccatttg ctgcggtact
    11761 ttctgtattt aaaacactat aagttgatgt cgcagaagat tttgtttcgg cctcatcatc
    11821 agcatcccaa atggaacctt tatattgaac tgatgtaatt cctggcttaa cttttccgta
    11881 cgaaacagtt gagttccaac gataggtagc cgaggcttct gtattctgat atccaggtga
    11941 aaagtctccc acattcgctt tcacttctgt gaaatactca ccttcttgaa gctccactgc
    12001 gtttgcatct aagcgataca tttggttatt atttttagtg agcgctcctt catacgttcg
    12061 gaatgtgtcg tttaaatttg ttttatattg aacatcagtt attttatttt ctgaaatggt
    12121 gctatcaaaa gggatattga ccatgtaggc ttcccagtta ggatcaaatt caatgtgata
    12181 catttgattt ttcttcacac cagatgttct tttattatcg atttggatac taccagccca
    12241 agtttcgtta tccgggttga ttgttccatt tgctgaaaat aaattcattt tattattgga
    12301 agtatcaact actttacaag tatctagagg agctaaagta gttaaatcat tagtattgtt
    12361 agttaatgca tcggtttcga atacttctcc atcatacgtt gtgataaccg catgtggcgc
    12421 ttttgcagtg ctataagttc caacaggcgt tcctttaggc actttatatt tgactccgta
    12481 aatagaatta ttcgctgagt tgaaatttaa ttgcttacaa tcaactacaa ccttattttc
    12541 acttggataa ttagtaatag ttaggttgga attatccgtt aaaggcgtac caccatgatt
    12601 cacaacgttt acaaactcca taccttctgg ataataaagc gtcatctcta tgttttttgc
    12661 tagataatac gctgatccac ggttgtctaa attatttaat ccattcacaa cagagtaaga
    12721 ttttgtatag ttataagaat ctgttgtatc tgtgcttgca agtacttctg ttagcctttg
    12781 attactatac caagttcgga acatagtttt cacatgatcc tgattcgtat aacctacaac
    12841 cttatttcct tccgcatgaa tcgcttgttc cgcggaagca actggtgaag ttgtctcacc
    12901 cataaaaatt tctgttttta ttggagtggc taagtcaact gctccgtaat attttgctgc
    12961 atctactcgt acagaaaaag taaagctcgc tttttcagtt cctggactta gctcataact
    13021 aactgttcca aaagtggctt gattatatgc tttttcttta tcaggtactt ttaccgaagt
    13081 aatggctatt cctagtggat cacttgcccc taaatgactt aaaacccctt tgtctacatt
    13141 cgaaccagcc tgatagttgc tcggcactgg caaagaaaca aaacgcattc catctggtaa
    13201 agtgaaattt acttttttgc cagtagaagt attgtcgcca aagtttactg ttgcagttac
    13261 ttctttaata tcaccgtttg cccatgctgt ttggtcataa tcaggtattt ttaaatcaac
    13321 cgttgtttgt cctgctttaa gtgattttag atttttgtta ctatctttag tagaaggagg
    13381 ttgaatatta tcagcttctt tttcagttac cttctctgtt gtattatctt tatttgcttc
    13441 atcatctgaa actatatcat ttacttcata agaagcagta tattttttag tttctgcttt
    13501 ttcttcgctt gcatcttgat aattaattaa gaaattagtt gtgccatttt tttcggcttt
    13561 atagcttact tcttggcctt ctttcttctc tccatcaggt gtttcaatgg taaggatttt
    13621 cacctgatcg ttttttggtg ttactttaat ggttaaatca gctgattttt tatcttcagc
    13681 caatttggac tgaacttcat aagttagctc atcattccca ttttcttttg caaaaacctt
    13741 aagcgctgtt aaatttaatt gtcctagtac taggaaaaat gccattaaca gtacgaggta
    13801 atgccgtgct ctagttgctt taatcataaa gagttctctc ctcaaagtat atattatagt
    13861 tgcgaaataa tgtgtaatca cattgcaact cttatattac ttgctaaaaa cttctatgta
    13921 catatgacta aaatgagttt ttaaaataaa gaatgaatat aagaatttta tacaaaagtt
    13981 cgtcatataa aaaagcggtt tccgacacaa ttccgacata tttaacaaat gaagaatcgt
    14041 tagtaatttt taaaagattc tccacttccc ttttacagag ccattcacca ataaaattca
    14101 ccacatacac aattcatctc atcgtttttt taccttttta gtactttttc caataaaaca
    14161 actaattatt aattttcacc tgcgcaatga ctacttatca ttctcataag ttattttgga
    14221 tagaaagaaa aaacacagaa atcctccgcc aaacgagtga tttctgtgtt tatataattt
    14281 atttgaaaaa cttattctga actaatttaa taatctccat catcacaact gctgcaagtg
    14341 ctagccccgc tgctatcgac cattcatgta ggccaaatga tgctgggatt gagaaaattt
    14401 ctcgagctcc tggtaatact gtaattccgt ataggacgaa acaaagtaat accgcaccga
    14461 ttacgtattt gttactgaag aatcctgcgc caaatgcggt ttggacattc gagcgagctg
    14521 caaatgtttg taatgtacgt gctaggataa gcgtagtaaa tgccattgca acactcatcc
    14581 ctggtgaaat ttgcaacccg atatattgtg agatgataac agcgataccg attaatacac
    14641 cgcggctgat aacggcgcgc atcgttccac cagcaaaaat gccttcgtta atatctctcg
    14701 gtttgcgttt cattacgtca ggttctgctt tttccatacc tagtgcgatt gctggtaagg
    14761 agtcattgac taagttgata aatagtaatt gtaacgcagt gaacgggtta atccagtcca
    14821 gcactagcgc gaataaaatc gcaataatcg cacctaggtt tcctgcaaat agataagcaa
    14881 ttgatttctt aatattgtca aaaacggttc taccaacgcc aaccgcatcc acaatcgaaa
    14941 cgaaattatc atcggtcaga atcatcgcgg cagagtcttt cgcaacgtcg gttccgctac
    15001 ccattgcgac accaatatcg gcttgtttta aagcgggtgc atcattgaca ccgtcgccag
    15061 tcattgctgt gattttgcct tttttctgcc aagctttgac gatacggatt ttattttctg
    15121 gtgaaactcg ggcgtagact gcgatatgtt ctagtttttt gtcgagttct tcttctggca
    15181 ttgcgtctag ttcttggcct gttaatgcga tatcatcggc atccattaaa ccaatgtcac
    15241 ggccgattgc ttgtgccgtt gttttatggt caccggtgat catgactgta cgaatgccag
    15301 cttttttgga ctcttcaatc gatgcataca cggcttcacg tggcggatca atcattgcag
    15361 ttaagccaac tagaacgata tcttgctcat cttctaattt taattcagtt gtatcagcag
    15421 gcatccgttt gtagccgtaa gcaaggaccc ggagcgcctg attcgaaaat tcttcatttg
    15481 tttcttttaa tttcgctaaa atttcttctg tcattggctt ttcttcccca tcaaggaaaa
    15541 cataactgca acgcgcgaac atcacgtctg gtccgccttt tgttagcatt gccttgtttc
    15601 cattaaaggt atgaagcgta gacattaact tacgatctga atcaaaggga atttcgcctt
    15661 cacgaatgaa tttttcgcga atttcattgt aatcttgatt atttttatta ctaaaggcaa
    15721 ttagcgccac ttcggtcggg tcgcctaact ccttgccctc actgttaata tttgaatcgt
    15781 tacaaagtac cgcaatatga atcaaacggc gttccccttc tgaccaattt tctggacttt
    15841 ccgggaaatt ttcttttgtg ccatcgggta aatagtaatc gacgaccgtc attttatttt
    15901 gcgttaacgt tccggttttg tctgtacaaa taacgcttgt ggagccaagt gtttcaactg
    15961 ctgggagctt tctaataatc gcgtgctgct ttgccatttt gtttgttcca actgcaagta
    16021 caatcgttac aatagaagaa agtgcttccg gaatcgctgc tacagctacg gccacggcaa
    16081 acataaaggc atttaaaatc gccgttgcca tatccgctga attgtcgccg agtaatacgc
    16141 gaccagcttc aactgcaaaa ataagtacac agagagctaa aataccgagt cctagctttt
    16201 tactgaatga ttctagtttt ctttgtagtg gtgtttgttt tgcttctgct gtttcaagaa
    16261 gtccggcgat ttttccgatt tctgtttcgc tcgctgtgcc tgttacaaca aacatcccac
    16321 gaccatatac aacgagggaa ccgctgaaaa ccatattcac acggtcgcca agccccactt
    16381 catctggaat ggtatcaata tatttctcga ccgcttccga ttcaccggta agcatccctt
    16441 cgtcgatttt taaagagccg ctttcgaaca aacggccgtc tgctgggacg aaatcaccag
    16501 catccaaaat aacgacgtca cccggaacaa gttcgcgcgc atgaatactt tgcttagagc
    16561 catcacgaat tactttggca accggcgcag acatttctcg taatgcatca agcgaacttt
    16621 ctgctttcct cgtctgaact acgctaataa tcgagttgac aataagtact aaaaagataa
    16681 taagcgattc aaccacttcg cctaaaacca actgcactaa ggcagcaacg actaaaacaa
    16741 taaccattgg atctttaaat gtttccagga aaagtttcca aagtggatct ttctttttat
    16801 tcttcagttc gttaaaaccg tatttttctt gtcgttttgt tacctcacta gttgttaagc
    16861 cttgttctgt tgcttctagt tgtgtaaatg tttctgccgc gcttttgcgg tatatctcca
    16921 atcatgtcag ccccttccaa acagtttatg tgttaagtat aacaaatctt aacagtgaaa
    16981 taatattgat aacactggaa atttacacac tcttaacaaa cagcgctttc aagttcccct
    17041 tttagctacg aaaggcaata aatagttgaa ccggacacaa aaaacagcta tactacaagc
    17101 agatagagta ggagggcatg gcatggataa aaatgaacaa gtcatggcga acgtcagaga
    17161 tttatttaat aagctcgctt ggattaataa agtgaagatg gaaaaagcgc tagagggata
    17221 taaaccttct gaagtccact gcatcgaata cattgccaaa aatgaagatc ctaatgtaac
    17281 gaaactcgcg gaagccttct atatgacaaa gagcgcgatt agcaaaatta caaaaaagct
    17341 gatggataaa ggctatattg aaagttatca aaaaccggag aataagaaag aaatttattt
    17401 ccgtctaaca gctaaaggcg ctgaaattaa ccaagtccac gatgatttgc atcaagaatt
    17461 cctcgatcgt gacaaggtag ttttcgaaga cgtaacggat gcacaatatg cggaagtgtt
    17521 aaaatttgtg gataaatata gtcgtcattt agataatgaa atgcagaaag tttacaatca
    17581 aaaatccgaa taaacctagt aacagcctaa tttttcaagt taggttgttt tttattgttt
    17641 tatttttgtt gacaaggaaa caaaaacgag ttaagctaat tatgtttcct aggacactaa
    17701 ttacaatcga taggagtatt acatgtcttc aactaaatct attattaata agaaaacttt
    17761 acttttcggt cttatatctg tcttcctttg tgggatgggt tttagtatta ttatgcccgt
    17821 tgtcccgttt ctcgtaacac cttacgtaac aaatgctagt gatcaagcgc ttatggtgac
    17881 actgctcaca tctgtttatg cgctttgcgt gttctttgct gcgcctggtc ttggtgcttt
    17941 aagtgacaga tttggcagac gaccagtgtt actcatttgt tttatcggct ctgcgattgg
    18001 ttactttatt ttcggtcttg gtggggcgct ttgggtgctc tttcttggtc gaatttttga
    18061 aggaatcact ggtggtagca taagtacact atttgctttc tttgctgata ttacgcctca
    18121 agaggagcgg acgaaatact ttggttgggt tagcgctgca gctggtgcgg gtgctgcgct
    18181 tggtccggct ttcggtggat tgcttgccca ctttggttac gcaatgccat ttttctttgg
    18241 agcagcgatt actttcatca actttttatt cggttatttc tacatgcctg agagtttaga
    18301 agaagcaaat cgtttaaaac gaattccgct tatgcgactc aatccgtttt cccagctgct
    18361 taaaattctg accatcaaaa acttaggacg tttactgatt gctgcatttt tcatttgggt
    18421 tcctaatggt tccttgcaag ctgtcatgtc tcaattcgcc attgatagtt tcagttggaa
    18481 gccagtttta attgggatga tgttttccat tatgggaatt caagatatct tgtcgcaagc
    18541 ttttgttatg ccaaaattac tactcaagtt aacggacaaa caaatagcta ttttggggat
    18601 gattgctgag attattggct atttgcttat tgcagcttcc tcgattttca cacttgcacc
    18661 gctacttgtt atcggaatgt tcgttttcgg ttttggcgac tcgattttcg gaccttcgtt
    18721 taacggcatg gtttcaaaat ctgctagcgc tagcgaacaa ggtcggattc aaggaggtag
    18781 ccaagccatt cagtcggtgg cgcgtattat cggacccgtt atcggtgggc aactttatat
    18841 tacgcttggc catgccgctc ctgctattat gggtgtcctt ttaatcactg ttgcaatttt
    18901 tattctttat aaaaagactt ctttagcaaa ataatttttt tcgtatttaa caaaccattt
    18961 tgcaatgaaa aaggtatcct tatactatta attaggatac ctttttagta attagtttat
    19021 cttcactcat tacttttcaa cttatagatg taaaactttt gcttgtcgga tgattttctc
    19081 ttgttttaat gcaactggaa tcatcattaa gcctgcaata attaaagctg taaacataat
    19141 ggtaaaagtt gcgccccagc cgtgtaaagt atagccaaat atttgtatac ccgcttttgt
    19201 tgggtctgcg atatatccta gaaagacttt agcaaaagaa tctccgaata agtatgcaaa
    19261 cgttccagtt aagccatttg ttacagctaa agcatttcta ggaacaaact cgatcaccga
    19321 cacaccaatt aaaagttggg ggccaaatac taagaatcct aaaataaata ataccgtata
    19381 catgctataa acacttgtaa cttgcgaata actaattaac atgaaaaatt caatgacaac
    19441 tgcaataatc gagcaaagca tacggcggcc tttcataata tctgagagcc agccccacga
    19501 taatgaacct agcaatgctc caatttcaaa aaaagaaata gtcataattg catcttttgt
    19561 gctccatcct agcgcttgaa tacaataaac gggcgcccaa ttatcaatac caattctaac
    19621 aatatagatg aatatattta tgacacataa agtccatacc caaggattat taataacaaa
    19681 tcgacacaaa atttgaaatc tagaaaggtc ttttgtctcc gattctcctt gttcttcccg
    19741 ctcttcaaaa atttcagcgg cagagttcca tcctaattct tctggttcat catgccccac
    19801 ggagaagcaa ataattgcaa tgatgatcgc aatgataccc ggaacgataa acattccccc
    19861 tgccccgcca ttaaagaaag tagtcgcacc ccaaaaagca acaattcccg ctaaagcacc
    19921 acctatatta tgcgaggcat tccaaaaacc taaccatctt cctcttttca attttggcgt
    19981 ccatcgtgtg atagttgaat aggaagccgg tccacctggt gattgcacaa atccatttgc
    20041 tccccaaagg ataaacaata tacccactgt tgcttgcttt gtaactaaaa gtattccaat
    20101 aataattgat ataatggcgg aaatccctaa taaaaaactc attatttttt tag
//
LOCUS       DASDYO010000044        20139 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.044, whole genome shotgun sequence.
ACCESSION   DASDYO010000044 DASDYO010000000
VERSION     DASDYO010000044.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 20139)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20139)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20139
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.044"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(22..633)
                     /locus_tag="U0290_001328"
     CDS             complement(22..633)
                     /locus_tag="U0290_001328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PepSY domain-containing protein"
                     /protein_id="HEM2301373.1"
                     /translation="MYRKLATVGMTVLLVGALSACSFNDDKDTSSNNSSNETTSSKSS
                     NNESSSDSLQNKSFDMSYEDAINAFKDKHSDAEISSVELEKSLGKYVYKVDGISNDNE
                     YEMKFNAETKEQLSDETDRLDREDAGGVEKENEKLSLDGIKSPKEAMDKAVSEQAGDV
                     TSWKIERELDTTYYEVTVKQDNNKYEIKLNAKTLEILQTEQDD"
     gene            complement(786..1025)
                     /gene="rpsR"
                     /locus_tag="U0290_001329"
     CDS             complement(786..1025)
                     /gene="rpsR"
                     /locus_tag="U0290_001329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S18"
                     /protein_id="HEM2301374.1"
                     /translation="MAGGRRGGRRRKKVCYFTSNGITHIDYKDVELLKKFVSERGKIL
                     PRRVTGTSAKYQRKLTVAIKRSRQMALLPFVAEEK"
     gene            complement(1069..1605)
                     /gene="ssb"
                     /locus_tag="U0290_001330"
     CDS             complement(1069..1605)
                     /gene="ssb"
                     /locus_tag="U0290_001330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM2301375.1"
                     /translation="MMNRVVLVGRLTKDPELRYTPAGVAVATFTLAVNRTFTNQQGER
                     EADFINCVVWRKPAENVANFLKKGSMAGVDGRVQTRNYEGNDGKRVYVTEIVAESVQF
                     LEPRNSNGGGGNNYQSGNNNNNYNSGGNNFGQAPTNNGGFGQDQQQSQNQNYQSTNND
                     PFASDGKPIDISDDDLPF"
     gene            complement(1661..1954)
                     /locus_tag="U0290_001331"
     CDS             complement(1661..1954)
                     /locus_tag="U0290_001331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S6"
                     /protein_id="HEM2301376.1"
                     /translation="MARKYEIMYIIRPNIEEDEKKAVVERFDGILTENGAEIIESKEW
                     GKRRLAYEINDYRDGFYHIVKLNADKADSINEFDRLAKISDDIIRHMVIKEEA"
     gene            complement(2233..3465)
                     /gene="arcA"
                     /locus_tag="U0290_001332"
     CDS             complement(2233..3465)
                     /gene="arcA"
                     /locus_tag="U0290_001332"
                     /EC_number="3.5.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arginine deiminase"
                     /protein_id="HEM2301377.1"
                     /translation="MKMEQALNITSEIGKLQTVLVKRPGSELENITPEYLESLLFDDI
                     PYLKMMQKEHDFFAKTMKDSNIEVLYLEKLAAEALREANNKESFLTKMIKESNQMDES
                     ALYVRDYLMSFDEEEMIRKLMSGLKKSEIPERKKKHLNEMMDEQYPFFLDPLPNLYFT
                     RDPAAVIGNGVTINRMFQPARRRESMFIELILKHHPRFSNQEIPVWSGRGEPFSLEGG
                     DELVLNEETVLVGVSERTDARAVERLAESLFSRSPKIKRVLAVEIPETRSFMHLDTVF
                     TMVNFAQFTIHPAIQNQQGELNIYILEKSENGLEITPRRDFQRVIAEVLDEPEIDFIP
                     CGGEDVIVSAREQWNDGANTLAIAPGEVITYDRNQVSNDLLRSAGIKVHEVISSELSR
                     GRGGPRCMTMPLVRENLK"
     gene            complement(3544..4203)
                     /locus_tag="U0290_001333"
     CDS             complement(3544..4203)
                     /locus_tag="U0290_001333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEM2301378.1"
                     /translation="MDFITYIIDFILHIDQHLVEIINNFGIWTYIILFLIVFIETGLV
                     VFPFLPGDSLLFAAGALSVLDGSILHIVPLIITLWLAAVLGDTVNYHIGKKIGTSIPE
                     DSWFGKLINKEKMEKAEAFFNKHGGKTIFIARFMPFIRTFAPFVAGASRMNYRYFLNY
                     NILGATVWVLLCTLAGYFFGNFPIVKDNFSLVVIGIIVVSVIPMVVSFIKSKMDKKSA
                     E"
     gene            complement(4307..5086)
                     /locus_tag="U0290_001334"
     CDS             complement(4307..5086)
                     /locus_tag="U0290_001334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2301379.1"
                     /translation="MDFFEISSKTVASLTRNERILFDYVVKNMNLIKNQSIREVSAEC
                     FVSTTTFLRFVRKLGFTGYSEFTTVLKFTLLGHTELKPSPFVVEQSDYREEYLKNIIE
                     SVRVLEPSKIKKITKKLVSKPRIYFFAKGLSKHAAKYIKYLYTMSGFLVEFPEDYQYR
                     QAVLPHIGKDDLVFILTYGGHDIELIQTAQKLKSRNETPMLISITGADNNIIQNMSDI
                     NLYIFTDEIEMNNLDITSRISTIAIMELILYQFMEDETSSF"
     gene            complement(5103..6212)
                     /gene="aguA"
                     /locus_tag="U0290_001335"
     CDS             complement(5103..6212)
                     /gene="aguA"
                     /locus_tag="U0290_001335"
                     /EC_number="3.5.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase"
                     /protein_id="HEM2301380.1"
                     /translation="MGQLKGLPVEDGFRMPGEYEPHIGCFMIWPERPDNWRLGGKPAQ
                     QNYKEVAVAISNFEPVTMFVSPNQYKNARKELPDTIRVIEMSNDDAWIRDYGPSFLVN
                     DKGEMRGVDWGFNAWGGLLDGLYFPWDKDNQIAKKVCDIERLDYYSQKDFILEGCSIH
                     VDGEGTLVTTEECLLSEGRNPNLTKIEIEQTLKKYFHVQKVIWLKHGFYLDETNGHVD
                     NIFNFVAPGEVVLSWTDNKSDPQYEISRECYDILANQTDAKGRTFIIHKLHCPDPVLI
                     TQTESEGVEAINGTFPRQAGDRLAASYVNYYTANGAIIFPLFDDPKDKDAQELLEQLY
                     PDRKIVGIKAREILLGGGNIHCITQHLPDKSTIRE"
     gene            complement(6313..7254)
                     /gene="arcC"
                     /locus_tag="U0290_001336"
     CDS             complement(6313..7254)
                     /gene="arcC"
                     /locus_tag="U0290_001336"
                     /EC_number="2.7.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamate kinase"
                     /protein_id="HEM2301381.1"
                     /translation="MNQKIVVALGGNAILSSDASAEAQQSALEKTAEYLVQFIENGDD
                     LIISHGNGPQVGNLMLQQHAGASEKNPAMPLDTCVAMTQGSIGYWMQNALDKAFLKHG
                     LDKVAVSLITQVVVDKDDPAFKKPTKPIGPFLTKEEAEKEMAETGAIFLEDAGRGYRK
                     VVPSPRPLSIKEHQIIKQLVDSGVVTISAGGGGVSVVENGLDLSGVETVIDKDFASEK
                     LAELISADLLVILTGVENVYINYNQPNQKKLERVTVSELEKYIDEKQFAAGSMLPKIE
                     AATAFVKERPNAKAIITSLENIGAMLEQGAGTVIIAG"
     gene            complement(7267..8361)
                     /gene="aguA"
                     /locus_tag="U0290_001337"
     CDS             complement(7267..8361)
                     /gene="aguA"
                     /locus_tag="U0290_001337"
                     /EC_number="3.5.3.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="agmatine deiminase"
                     /protein_id="HEM2301382.1"
                     /translation="MRTIDSSSKKDGFRMPGEFEKHAGCYIIWPERPDNWRLGAKPAQ
                     KAFVDVATAISRFEPVTVVASSSQYVNARYMLPDEIRVVEMDNDDAWVRDSGPTFVVN
                     DSGDVRGVDWSFNSWGGLVDGLYFPWDKDDQVAQKICELERKDRYRLADFVLEGGSIH
                     VDGEGTLVTTEECLLSEGRNPQLSKQQIEMVLKEYLNLEKIIWLKRGIYLDETNGHVD
                     NIFNYVRPGVVALAWTDDETDPQYEISKECFDILSNETDAKGRKLEVHKINVPKPILI
                     TDEESKGVDAVEGTLPREEGDRLAASYINYYTANGGVVFPLFGDPNDELAREKLRQLY
                     PNCEVVGVKAREILLGGGNIHCITQQVPRG"
     gene            complement(8348..9733)
                     /locus_tag="U0290_001338"
     CDS             complement(8348..9733)
                     /locus_tag="U0290_001338"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEM2301383.1"
                     /translation="MEKKKKFRLFDAVLMAVCVVLVVESAAPAAAIGSSQFFWWIALL
                     ILFFLPYGLVSAELGTTYDDEGGIYDWVKRAFGRKWGARVAWLYWINYPIWMASLAVL
                     FVEVITQIFPVSFGTPVSIFIQLIFVWIVVIISCYPVSDSKWILNIAAFCKVAIMLCL
                     GVLGIYFAMTKGLANDFSGKALLPTFDLESLSFISVILFNFLGFEVVTTLASDMENPK
                     KQIPQAIIYGGVLIAFFYLLAAFGMGAAIPTSELSTSGGLIDSFIMLIGGVNPFVIII
                     GIMFMYTLVANLVSWALGVNYVAMYAAKNKDLPAVFGKTNPKNGMPTGTSILNGIVAS
                     VLIVAAPLIPNENIFWAFFALNVVALLGSYILMFPAFLKLRKVDPDRERPFKVPGGKI
                     LLYLMTFVPMILLIITLIFSAVPLNGSSAELNEKIPILIGTVVAVIVGEICIWLAGKR
                     KDKGEIGNEND"
     gene            complement(9806..10831)
                     /locus_tag="U0290_001339"
     CDS             complement(9806..10831)
                     /locus_tag="U0290_001339"
                     /EC_number="2.1.3.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="putrescine carbamoyltransferase"
                     /protein_id="HEM2301384.1"
                     /translation="MNKKRDFIDTKDFSKEEILFMIEIGRKMKESIKNGHYPQLLKHK
                     TLGMIFEQSSTRTRVSFETAMTQLGGHAQYLAPGQIQLGGHESVGDTAKVLSRLVDIL
                     MARVERHQTVVELANTAAIPVINGMSDYNHPTQELGDAITMFEHLPKGKKIEDCKIVF
                     VGDATQVCASTMFMATKLGMDFVQFGPKGFQLREEHLKIAEENCKVSGGSYLITEDVD
                     IALKDADFIYTDVWYGLYEAELSEEERMKTFYPKYQVNKELISKAAPHVKFMHCLPAT
                     RGEEVTDEVLDAPYSVVIDEAENRLTAMRALLVYFMNPYVREAGFAVAEKYDAELELL
                     LRNGAGL"
     gene            complement(11066..12151)
                     /locus_tag="U0290_001340"
     CDS             complement(11066..12151)
                     /locus_tag="U0290_001340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEM2301385.1"
                     /translation="MKPTMMTYINEEEEMCRVILADFQTNAEKLESLVKNGAKEWLIL
                     ATGSSLNAAQSAKYYIENLADVRITIEEPFNHLYYEKLSSHLDLVIGISQSGQSTSTI
                     SALERVKKEASVPVVALTSDVTSEIAEFADITLDIGSGKERVGYVTKGFTATVLTLML
                     TGLHFAYKTVQIDETRFNNEISAFSRAIDAIPATIAETEAFYERWQEEFATAPKFTAI
                     GYGPTVGTCKEFETKFSETVRVPSQGLDLEAFMHGPYLEVNPQHRIFFLETASAVTER
                     LVLLRDYESKYTPFTYTVKFGKGEDDRTLVIPTDLDEYQAPFLMILPFQILAHHIAEL
                     KGNKLTERIYTDFGVAMKSKTKPGDYA"
     gene            complement(12153..13511)
                     /locus_tag="U0290_001341"
     CDS             complement(12153..13511)
                     /locus_tag="U0290_001341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2301386.1"
                     /translation="MSSERSLSSRFIEGLSIFAQKISSQKHIMAIRDGFAAMIPITII
                     AAFFLLVNNVLLQPENGLLKFIPNVENYLGVGIQVYNATLGIMAILAAFLIGNFLAKS
                     YGMEGRTEGVIAVAAYVVLIPASSHLMSVDGKAFEAGGVLTQEMTSSTGMFLAIIAAL
                     VSVTMLAKFSKSKKLKISMPESVPPAIAKSFNILIPSFLVLSILAIIEVLVVSFVSMS
                     IPEIIVKVLQIPLVGGFQTLPGILLYVFLAGFLWVFGIHGAFVLGAISGPVLLTSLQQ
                     NIDAVNAGTALPNIVTQPFLDAFVYMGGGGTIICLVIAIFIASKRPDHRMVTKFGLIP
                     SIFNVSEPLMFGLPVVFNPIYGIPLVIAPLASTAMAYFATSWGWISQTYILIPWVTPP
                     VLSGYLATGGDIRASILQIAIIIVGTLIYLPFVLVANRAYVLEQKAAGKVEAETVTNG
                     EV"
     gene            complement(13524..15926)
                     /locus_tag="U0290_001342"
     CDS             complement(13524..15926)
                     /locus_tag="U0290_001342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 9 protein"
                     /protein_id="HEM2301387.1"
                     /translation="MKPSMKRQIAQTGIIHRPLPIETKHALETLAKKKQVLSSRTLFS
                     SKQQVSLEFTHQGAGDFTISDQDEIKLSSPVVMPHWPAGAPDDGDYTNFGNVTISAPI
                     ENEDWSGFNRVRIQVFPDFPGVTNPYLMISFKNDGSVKVPDIYGREGVHGVNLINHEW
                     NDVIFEIEGLPRDRMTEMSFSYYLNGPERLTAGTMELFINEIKLEQISEPEISKGWIP
                     QDNTLVYSHNGYSKGMPKVAFCANKFVATSFTIHDKETDKVVFTGKSYQNATETGDFI
                     ILDFSDLQTVGEYYLKFADMQTEIFQIGTSEVIWESSIWKSLNFIFCERCGCPVFGKH
                     TTCHADIIAEHDGKQLSFNGGWHDAGDVSQQLIQTAEVTMALYEMASSLPEKEEMLRM
                     RLLEEGEWGLDFILKTRFGDGFRATSAGMTRWTDGLVGGMDDAIARVHNQAYENFYCA
                     GIEAYIGSQIADNATMQNHLLRIAEEDLLFAIKELEKHGTSQKPIFWEHTYQTSESLY
                     YATASWAASMVYQLTNKEIYAEKAAEWLYLMLEAQEKAGIRDSETSELYKGFFYRDKT
                     HKVIQHFNHQAREHLYLLALEAALETQPSNAEKQTWLQAVEMYGDYLKKVTRFTKPYP
                     LIPAGLYKKDEYLDEASFHLQHLLIDERAIEEYQLQFEQGIQINDEIALRKFPIWFSF
                     RGNNAILLSAGKAASIAGKILKDKSLLDIAEGQLQWVIGMNPFGQSMMHGEGYRYAQQ
                     YSVLNGEITGEIPVGMETFRNEDEPYWPEFNNATYKEVWVGNAGKWMSIVADLNKITG
                     KS"
     gene            complement(15923..16888)
                     /locus_tag="U0290_001343"
     CDS             complement(15923..16888)
                     /locus_tag="U0290_001343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM2301388.1"
                     /translation="MDIQESVIGIDLGGTKILIGEVTKDGEVLNSKSYPSNTENQTKA
                     TEILLKVLDDYTQNIGFIAPKQTGIGVGLVGRVNHKSGVWLEIEPGKSNPTPLADILE
                     AKTGLPVSLGNDVVCATMAEKQFGWGQETNDFIYLNVGTGLAAGFVVDGRIIQGGHFN
                     AGEIGHAVVDIHSDVLCGCGRRGCVERLASGLGIKEEALRRLNNYPTSILAEAETELT
                     GKMVLHAAEQKDELAEEIIDNATFQLANLIMNLVRTTDPECVILGGGVTQNEHFFQKI
                     LGNLQSNTIRFVTKGVVRSKLEKDKVGLIGAAVIGMRLGNEGGKE"
     gene            17090..18145
                     /locus_tag="U0290_001344"
     CDS             17090..18145
                     /locus_tag="U0290_001344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2301389.1"
                     /translation="MKKITIQEIAKLSGVSVSTVSRVLNNSPSVSAAKRKKIQAIIDE
                     HNYTPSVFARGMVNKQTKNIGVILPDISNPYFISLITQIQKFALDYMFSTILFNTMLA
                     EPNNKNNQHPLTEEDYLKIILEKQVDGLLILGGEIDKEIVPKEYITALNQLNNEIPVV
                     VIGSKIPELNCLFIERNLKKGVTTLVSHLTALGHKNIGFIGGESGVKITTYRLESFKE
                     AMTSYQHPVNDDWVVLSDYYTADGYAAMTQLLENSATLPTALVAINDNVAIGAIRAIN
                     DAKLSCPEDIAIVSCDQFMNGDYQTPRLTSMDQHNEYLGKMAILQLISAINGQVEPMI
                     INHNPELIIRESCGSKL"
     gene            18162..18971
                     /locus_tag="U0290_001345"
     CDS             18162..18971
                     /locus_tag="U0290_001345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2301390.1"
                     /translation="MEKYLICSDLDGTLLLKNQTISPKTLNLLQQLIEEGHHFAVSTG
                     RMYNSATDFANLVHPKADVIASNGGVVAVSGEIILQEKMKQSALLETFLLCQNHDLPV
                     FFFSTDTVYYTKNPPYYFTDEEDKGRVNATKLVPIKTKESFLEHADQFINGIVIEEED
                     FDKLAALRSELEKLSDVSILSSHANNIEILPKDMDKKYAVKNLAAHLNIKPENVITFG
                     DGENDIGMLEVAGAGVAMENASELVKKSADFVTTANDADGIYYFLKKYLNR"
     gene            complement(19008..19346)
                     /locus_tag="U0290_001346"
     CDS             complement(19008..19346)
                     /locus_tag="U0290_001346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HEM2301391.1"
                     /translation="MKVEGLLGFLGAALGIGFSLMVLVIPDISQALEEESFFFYMLTI
                     GSLVLSGVGLAGSFIVSHKPRLGGAMMVAAAIGCTMSISIMFLLPIVLLAVGGLIALI
                     NYEEAASVEE"
     gene            19568..20017
                     /locus_tag="U0290_001347"
     CDS             19568..20017
                     /locus_tag="U0290_001347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2712 domain-containing protein"
                     /protein_id="HEM2301392.1"
                     /translation="MIIIKNFASKNIRLIMALVIGVLVFAPVFHSKAADNNIGFDFKL
                     KPNCANSGSSSRYRETSSVNNPWKVRLDNSTEGKGTIASFWLGTYNKNKNAVQGSTIM
                     NVKQGAKTRYCGAYKVANKNTTYLAAENNNYNSKTYYVDGIWDEETW"
BASE COUNT         6050 a         4362 c         3282 g         6445 t
ORIGIN      
        1 acagttggct tttccatttt attaatcgtc ttgttccgtt tgaagaattt ctaaagtttt
       61 tgcatttagt ttgatttcgt atttgttatt atcttgtttt actgtcactt cataataagt
      121 tgtatctaat tctctttcta ttttccaact tgttacgtca ccagcttgtt cagaaacagc
      181 cttatccatg gcttcttttg gtgatttaat tccatctaag ctaagttttt cgttttcttt
      241 ttcaactcca cctgcatctt ctcggtcaag tcgatctgtt tcatcactta gttgttcttt
      301 tgtttcagca ttgaatttca tttcgtattc attatcattt gaaatcccat caactttata
      361 gacatatttt cccaagcttt tctctaattc aacgctagat atttctgcat cactatgttt
      421 gtctttgaat gcgttaatcg cgtcttcata actcatatcg aagcttttgt tttgcaagct
      481 atctgatgaa ctttcattat tactgctttt gctactagta gtttcattgc tgctattatt
      541 tgatgatgta tccttatcat cattaaaact acatgctgat aatgctccta ctaataatac
      601 cgtcatccct actgttgcta attttctata cataattgtt tccccctgtg cattttttta
      661 cttctatata agaataacat gaataaatag cattaacttc cttcttaggt cctaggttca
      721 catgatccaa ggtctaattt atgaaaaaac agtctagaaa tgaattctag actgttaaaa
      781 ttaatttatt tttcttcagc aacaaatggt agtaatgcca tttggcgtga gcgtttgata
      841 gcaacagtaa gtttacgttg atatttagcg cttgttccag ttacacgacg aggtaaaatt
      901 ttaccacgtt cggaaacgaa ttttttaaga agttctacat ctttatagtc gatatgcgta
      961 ataccattgg aagtaaagta acatactttt ttccgacggc gtccgcctct gcgtcctcca
     1021 gccattgaaa gttcctccta tcttaaagtt caaaccgcta aaatgaattt agaatggcaa
     1081 atcgtcatca gaaatgtcga ttggcttacc atcacttgca aaaggatcat tattagtgga
     1141 ttgataattt tgattttgag attgttgctg gtcctgtccg aatccaccgt tatttgtagg
     1201 tgcttgtccg aagttatttc caccgctatt ataattattg ttgttattgc cactttgata
     1261 gttatttccg ccaccgccat tagaattacg cggttcaagg aattgaacac tctctgctac
     1321 aatttcagtc acataaacac gtttaccgtc gttcccctcg taattacgag tttgaacacg
     1381 gccatcaacg cccgccatgc ttcctttctt caggaaatta gcaacgtttt ctgccggttt
     1441 acgccaaaca acacaattaa taaagtcagc ttctcgttct ccttgttggt tagtgaaagt
     1501 gcgatttaca gctaatgtaa aagtcgcaac agccacacca gctggagtgt aacgtaattc
     1561 aggatctttt gttaagcgtc ctacaagtac tacacgattc atcatgcaaa accaacctcc
     1621 tctcgtttag taaatcaagg tcctagcctt gaatgaattc ttatgcttct tctttaatta
     1681 ccatatgacg aatgatatca tcagaaattt tagctaaacg gtcaaattcg ttgatagaat
     1741 ctgctttatc agcgtttaat ttcacgatgt ggtaaaaacc atcacgatag tcattgattt
     1801 cgtatgctaa gcgacgttta ccccattctt ttgattcgat gatctccgca ccattttcag
     1861 ttaagattcc gtcaaagcgt tctacaacag cttttttctc atcttcttca atgtttgggc
     1921 gaatgatgta cataatttcg tactttctag ccatctactc tacacctcct tgtggtctta
     1981 agcggctctg atatagcatg aaaccatacc atatccctga aattcagact gcctttagca
     2041 agccttaaaa tcaagagcga gcaaggaata atttataatt actcacaata aaatattata
     2101 tcatagcgct aactaaccag caagatattt ctcgaaaatt ctggtttgaa aacactatag
     2161 cacatctcaa aatagccggc aatacttttt acgaaagtct tgttttgcag gggaattctc
     2221 gtttttaaag acttatttta gattttctct aacaagcggc atcgtcatac atcttggccc
     2281 cccgcggcct ctagaaagct ccgaactaat cacttcatga accttaatac ccgcacttct
     2341 taacagatcg tttgatactt gatttcgatc atatgtaatt acttctccag gagcaattgc
     2401 taacgtgttt gccccatcat tccactgctc tcgcgccgaa acaattacat cttctccgcc
     2461 acaaggaata aaatcaattt ctggctcatc caaaacctcc gcaatcacgc gctgaaaatc
     2521 tcttcgcgga gtaatttcta atccattctc acttttttct aaaatgtata tattaagttc
     2581 tccttgttga ttttgaattg ctggatgaat cgtgaactgt gcaaaattaa ccatggtgaa
     2641 aaccgtgtcc aaatgcataa atgaccttgt ttcaggaatt tcaacagcta aaactcgttt
     2701 aatttttgga gaacgactaa ataaactttc tgcaagccgt tcgactgctc gtgcatccgt
     2761 tcgctcagat acaccgacaa gaacagtctc ttcatttaga actaactcat ctccaccttc
     2821 taaagaaaac ggctctccgc gccctgacca taccggaatt tcttgattac taaaacgagg
     2881 atgatgtttc aaaatcagct cgataaacat cgactctcgc cttctagctg gctggaacat
     2941 tctattaatc gtcacaccgt taccaataac agctgctgga tctcgagtga aatacaaatt
     3001 tggtaatgga tctaggaaaa atggatattg ttcgtccatc atttcattta agtgtttctt
     3061 tttgcgttcg gggatttctg atttttttaa accggacata agttttctaa tcatttcttc
     3121 ctcgtcaaaa gacatcaaat aatctcgtac atatagcgca ctttcgtcca tttgattgga
     3181 ttctttaatc attttcgtta aaaaagactc tttattgtta gcttctcgta atgcttcagc
     3241 agctagtttt tctaagtaga gtacttcgat gtttgaatct ttcattgttt tagcaaaaaa
     3301 atcatgttcc ttctgcatca tttttaaata cggtatatca tcaaataata aagattctag
     3361 gtattctggt gtgatatttt cgagttcaga acccggcctc tttacaagaa ctgtttggag
     3421 tttgccaatt tcagatgtaa tattcaatgc ttgttccatt ttcatcacct cttcctaact
     3481 aattacccca aaagtttgtc atgtatgcga gagatttccc gggaaataaa aaaagcacag
     3541 agattattct gcgctttttt tgtccatttt acttttaatg aacgaaacta ccattgggat
     3601 aacggaaact acgataattc cgattactac taacgagaag ttgtctttaa cgattgggaa
     3661 gttcccgaag aagtaacccg cgagcgtaca aagtaatacc caaacagttg cccctaaaat
     3721 attataattt aagaaataac gataattcat acggcttgct ccagctacaa atggcgcgaa
     3781 cgtgcgaata aaaggcatga acctagcaat aaaaattgtt tttccaccat gtttattgaa
     3841 gaacgcctcc gctttttcca ttttttcttt atttattagt ttcccaaacc agctatcttc
     3901 tggtatggat gttccaatct ttttaccgat atgatagttc actgtatcgc ctagaactgc
     3961 tgctaaccat aaagtaataa ttagcggaac aatatgtaaa atcgaaccat ctaatacaga
     4021 taatgcaccg gctgcgaata gtaatgaatc tcctggtaaa aatggaaata ctaccaatcc
     4081 agtctctata aaaacaatca ggaacaaaat aatgtaagtc caaattccaa aattatttat
     4141 aatctccact aaatgttggt caatgtgcaa aataaaatca atgatatagg taataaaatc
     4201 caccaggcac tcacttcctt ttcttttttt aaaagtcaaa gttcatttta ccacaagtca
     4261 agtctccttg tatcagactt gtgacttatt tatcaattct taacaattaa aaactactag
     4321 tttcatcttc cataaactgg tataagatta gctccataat tgcaattgta gagatgcgag
     4381 aagtaatatc taaattattc atttcaattt catctgtaaa aatatataaa ttaatatcac
     4441 tcatattttg aataatatta ttatcagccc cagtaatcga aatcaacatg ggcgtttcat
     4501 ttctgctttt tagtttttgg gcagtttgga ttaattcaat gtcatgtcca ccgtacgtaa
     4561 ggataaaaac taaatcatct ttaccaatat gcggcaatac agcttggcga tactgataat
     4621 cttcaggaaa ctctaccaaa aatccgctca ttgtatagag atatttgatg tatttcgcag
     4681 catgtttact cagcccttta gcaaaaaaat aaattcgcgg tttgcttact agttttttgg
     4741 tgattttctt gattttactt ggttctaaaa ctcggacaga ttcaataatg tttttcaaat
     4801 attcttcacg ataatccgac tgttctacga caaatgggga cggttttagc tctgtatgcc
     4861 caagtaaagt gaactttaag actgttgtaa actcgctata accagtaaat ccaagctttc
     4921 ttacaaaacg caaaaaagtt gttgttgaaa caaagcattc tgcagaaact tctcgaatac
     4981 tttgattttt aattaaattc atattcttaa cgacatagtc aaataaaatc cgctcattcc
     5041 gagttaggga agctacagtc ttactggaaa tttcgaaaaa gtccatactt caagtctcct
     5101 ttttattcac gtatcgtact tttatcaggg agatgttgcg tgatacagtg aatatttccg
     5161 ccgcctagca aaatctcacg tgctttaatc cccacaattt ttctatcagg atataactgt
     5221 tcaagtaatt cctgcgcatc tttatctttt ggatcatcaa acaatgggaa aataatagca
     5281 ccattcgctg tatagtaatt tacataacta gcagctaatc gatctccagc ctgtctaggg
     5341 aaagttccat taatcgcctc cacaccttcg ctctctgttt gcgtaataag tactggatcc
     5401 ggacaatgta gtttatgtat tataaaagtt cttcccttag catctgtttg gttagctaaa
     5461 atatcatagc attctcttga aatttcatac tgcggatcac ttttgttatc cgtccacgat
     5521 aaaacaactt cgccaggtgc cacaaagtta aaaatgttat ctacatgtcc gtttgtttcg
     5581 tcaagataga agccatgctt aagccaaatt accttttgta catggaaata tttttttaaa
     5641 gtttgttcga tttctatttt ggttaaattc ggattccttc cttctgataa cagacactct
     5701 tctgtcgtaa ccagcgtccc ttcaccgtct acatgaatgg aacaaccttc taaaataaaa
     5761 tctttctgtg agtagtaatc aagtcgctct atatcacaaa ctttttttgc aatttgatta
     5821 tctttatccc acggaaaata tagaccatca agaagaccac cccaagcatt aaatccccag
     5881 tcaacaccac gcatttctcc cttatcattc accaaaaaac ttggtccata atcgcgtatc
     5941 cacgcatcat cattactcat ttcgataaca cgaatggtat ccggaagttc tttacgagca
     6001 tttttatatt gatttggtga tacaaacata gtgactggct caaaatttga aatagcgact
     6061 gcaacttctt tatagttttg ttgcgctggc tttccaccaa gccgccagtt atcaggtctt
     6121 tctggccaaa tcatgaaaca gccaatatga ggttcgtatt ctcctggcat tctgaatccg
     6181 tcctctaccg gcaacccttt cagttgtccc atcctcattc tcctcctatt acttcataac
     6241 cacattatac atgaaatact gttttacaag acaaaaaccg agtaacaagt acccggattt
     6301 cgccctattc tactagcccg caataatcac tgtccctgcc ccctgttcta gcatggcgcc
     6361 aatattttca agcgaggtga ttattgcttt ggcatttggt ctttctttga caaaagctgt
     6421 tgctgcttcg attttgggca acatacttcc tgctgcaaat tgtttctcat caatatattt
     6481 ttctaattct gaaacggtaa ctctttcaag tttcttttga tttggctgat tataattgat
     6541 ataaacattt tccacccctg ttaaaataac caacaaatcc gcactaatta gttctgcaag
     6601 tttttcagaa gcaaaatctt tatcgattac ggtctctacc ccagataaat caaggccatt
     6661 ttcaacgacc gaaactccgc ctccaccagc agaaatagtc acaacaccac tatcaaccaa
     6721 ttgtttaata atttgatgtt ctttaatact aagcgggcga ggagatggta caactttacg
     6781 gtaacctcga ccagcgtcct caagaaatat tgcaccagtt tctgccattt ccttttcagc
     6841 ctcttcttta gtaagaaaag gcccaattgg tttggttggt tttttaaaag caggatcatc
     6901 tttatccaca acaacttgtg taattaatga aaccgctact ttatctagcc cgtgttttaa
     6961 aaatgcttta tctagcgcat tttgcatcca gtagccaata ctcccttgcg tcattgcgac
     7021 acacgtatca agcggcattg ctggattctt ttcagaagct cccgcatgtt gttgcagcat
     7081 caggttgcct acttgcggtc catttccatg cgaaataatt aaatcatccc cgttttcgat
     7141 aaattgcacc aaatattcgg ctgttttttc aagtgcactt tgttgcgctt cagcactggc
     7201 atcactcgat aaaattgcat ttccacctag tgccacgact attttttgat tcatgctgtt
     7261 cactccttat cctcttggca cctgttgagt aatacagtga atatttccgc caccaagtaa
     7321 aatttctctt gctttcacac caaccacttc acagtttgga taaagttgac gtaatttttc
     7381 gcgggcaagt tcatcatttg gatccccaaa tagcgggaaa accactccac cattcgctgt
     7441 gtagtaatta atatagcttg ctgccagtcg gtcgccttct tcccgtggta gcgttccttc
     7501 cacagcatct acacctttac tttcttcatc ggtaattaaa attggttttg gtacatttat
     7561 tttatgcact tctaatttgc gcccttttgc atcggtttca ttcgataaaa tatcaaagca
     7621 ttctttagaa atttcatact gcggatcagt ttcatcatct gtccacgcga gcgctactac
     7681 acctgggcgt acataattga aaatattatc tacatgacca ttcgtttcat ctaaataaat
     7741 tcctcgtttt aaccaaataa ttttttctaa atttaaatac tcttttaaaa ccatttcgat
     7801 ttgctgtttt gaaagttgtg gattgcgacc ttctgataat aagcattctt ctgtcgttac
     7861 aagcgtgcct tcaccgtcga catgaatgga acctccttct aacacaaaat cagctaagcg
     7921 ataacgatct tttcgctcta attcgcatat tttttgagcg acttgatcat ctttatccca
     7981 cgggaagtac aaaccatcga ccaatccacc ccaagagtta aatgaccaat ccacaccacg
     8041 tacgtcacca gaatcattga ccacaaaagt tggtccagaa tcgcgcaccc aagcatcgtc
     8101 gttatccatt tccactacgc gaatttcatc aggcaacata tatctcgcat ttacatattg
     8161 acttgaactt gcaacaactg taactggttc aaaacgggaa atcgctgtcg ccacatcaac
     8221 aaaagctttt tgcgcaggtt tggctcctaa gcgccaatta tctggtcgtt ctggccaaat
     8281 aatatagcaa ccagcgtgtt tttcaaattc cccaggcatt ctaaatccat cttttttaga
     8341 agaactatca atcgttctca tttcctatct ctcctttgtc ttttcttttc ccagcaagcc
     8401 aaatacatat ttcaccaaca atcaccgcta caacggttcc aattaagatt gggatttttt
     8461 catttaattc tgcacttgaa ccatttaatg gtactgcaga gaaaatcaaa gtaataatga
     8521 gtaaaatcat tggtacgaaa gtcattaagt aaagcaagat tttgccacct ggcactttaa
     8581 atggacgttc tcggtccgga tccaccttac gtaatttcaa aaatgctgga aacattagga
     8641 tatatgaacc tagtaaagca actacattta atgcaaagaa tgcccagaaa atattttcat
     8701 ttggaataag tggtgccgca acgattaata cagaagctac aatcccattt aaaatactag
     8761 tacccgttgg cataccattt ttcggatttg tttttccaaa aacagctggt aaatctttgt
     8821 ttttcgctgc atacattgct acataattca cgcctagtgc ccaagagact aaatttgcta
     8881 ctaatgtata cataaacata atcccaataa taataacaaa tgggttaact ccgccaatca
     8941 gcataataaa gctatcaata agaccaccgg atgttgaaag ttcagaagtc ggaattgctg
     9001 cccccattcc gaaagctgct agtaaataga agaatgcaat caaaacccca ccataaatga
     9061 ttgcttgagg aatttgtttt ttaggatttt ccatgtcact cgcaagcgtt gttaccactt
     9121 caaaacctaa gaaattaaat aaaatgactg aaataaatga caaactctct aaatcaaaag
     9181 ttggaagtaa tgcttttcca gagaaatcat tcgccaatcc cttcgtcatc gcaaaataaa
     9241 ttccaagtac accaaggcaa agcataattg ccactttaca gaaagctgcg atattaagaa
     9301 tccatttgct atcactcact ggataacaac taataataac aacaatccac acaaaaatga
     9361 gctgaataaa aatcgaaacc ggcgtcccaa atgaaaccgg gaaaatttgc gtaataactt
     9421 ctacaaacaa taccgctaaa ctcgccatcc aaatcggata attaatccag tataaccaag
     9481 cgacacgcgc accccatttt cggccaaatg cccgttttac ccaatcatag attccgcctt
     9541 catcatcata ggttgtccca agttctgccg aaacaagtcc atatggtaag aaaaataaaa
     9601 taagtaacgc aatccaccag aaaaattgag atgatcctat cgccgctgct ggcgcggcag
     9661 attccacaac taaaacgaca catacagcca taagaaccgc atcaaataat ctgaatttct
     9721 tctttttttc caaaatgccc actcctcttt ttaagtgggg ggaagaaaac ggccagcgct
     9781 ctcttctcct ccttattttg gtatcttata agccagcgcc atttctaagt aataactcta
     9841 gttctgcatc atatttttcc gcaactgcaa aacccgcttc tctcacatac ggattcataa
     9901 agtatacaag cagtgctctc atcgctgtta aacgattttc agcttcgtca ataacaactg
     9961 agtatggagc atcaagcact tcgtccgtaa cctcttcccc acgagttgcg ggtaaacagt
    10021 gcataaactt cacatgtgga gccgctttac tgatcaattc tttattcact tgatatttag
    10081 gataaaaagt tttcattcgc tcttcttcgg aaagttccgc ttcgtatagg ccataccaaa
    10141 catctgtata aatgaaatct gcgtctttta acgcaatgtc cacatcttct gtaattaaat
    10201 agctcccgcc agatactttg caattttctt cagcgatttt caaatgttct tcacgtaatt
    10261 gaaatccttt tggtccaaat tgaacgaaat ccattccaag ttttgttgcc ataaacattg
    10321 tagatgcaca tacttgagta gcatctccta caaagacaat tttgcagtct tcaatctttt
    10381 ttccttttgg aaggtgttcg aacatagtaa ttgcatcacc taattcttgt gtaggatggt
    10441 tgtaatcact catcccatta ataaccggaa tagcagctgt gtttgcaagt tctactaccg
    10501 tttgatgacg ttcaacacgc gccatcaaaa tatctacaag cctagaaaga actttggctg
    10561 tatcgcctac tgattcatgt ccgccgagct gaatttgtcc aggagctaaa tattgcgcat
    10621 gaccaccaag ctgtgtcatt gctgtttcaa aagatacacg agttcttgtt gatgattgtt
    10681 caaaaatcat cccaagcgtc ttatgtttta aaagttgtgg gtaatgaccg tttttaatag
    10741 attctttcat tttgcgaccg atttctatca taaatagtat ttcttcttta gaaaaatctt
    10801 tagtgtcgat aaaatctctt tttttgttca tttctatcac ctcaaccatt tattttctaa
    10861 accttttctg gggcatactc gagtatttcc ttgccacatg ctcatcatag tacaaaagag
    10921 attgtttttg aatacgtttt ctttttttaa gaacagacgg aatcaccctg taactcgtta
    10981 cattctgcgt aacatgtgac ccaaatacaa aaagaagact ggaaaaaccc tccttataag
    11041 gatttttcca gtctattagc ctctcttatg catagtcacc tggttttgtt ttactcttca
    11101 tcgctacgcc aaagtctgtg tagatacgtt ctgttaattt attgcctttc aactccgcaa
    11161 tatgatgcgc taaaatttgg aaaggaagaa tcattaggaa aggcgcttgg tattcatcta
    11221 aatctgttgg tataactagc gttcggtcat cttcaccttt accaaattta actgtatacg
    11281 taaacggggt gtatttagat tcataatccc gtaacaatac taatcgctcg gtaactgcac
    11341 tcgccgtctc caagaagaag attctatgtt gtggatttac ttctaaatac ggcccatgca
    11401 taaacgcttc taaatcaaga ccttgtgatg gcacgcggac agtttctgag aattttgttt
    11461 caaattcttt gcatgttcca acagtaggac catatccaat tgctgtgaat ttcggtgcag
    11521 tagcgaattc ctcttgccat ctttcataaa atgcttctgt ttcggcaatt gttgctggaa
    11581 ttgcatcgat tgctcggcta aatgcactga tttcattatt gaacctagtt tcatcaattt
    11641 gtactgtttt gtatgcaaaa tgaagtcctg tcagcattaa tgttagaact gttgctgtaa
    11701 aaccttttgt tacgtagcca actcgttctt ttccggagcc aatatcaagc gtaatatccg
    11761 caaattcagc aatttcactc gttacatcac tagttagagc gactactgga acggaagctt
    11821 cttttttcac tcgttctagc gcagaaatgg tcgacgtgct ttgaccgctt tgcgaaatcc
    11881 cgataaccaa atctagatgg cttgataatt tttcataata taaatggttg aagggttctt
    11941 caatcgtaat gcggacatcg gctagatttt caatgtaata tttggcgctt tgagctgcat
    12001 ttaagcttga tccagttgct aaaattaacc attcttttgc gccatttttt acgagtgatt
    12061 ctagtttttc tgcatttgtt tggaaatctg ctaaaattac tcgacacatt tcctcttctt
    12121 cattaatata cgtcatcatt gttggtttca ttttaaactt ctccattcgt tactgtttct
    12181 gcttctactt tcccagcagc tttttgttct aaaacatacg cgcggtttgc tacgagtaca
    12241 aatggtaggt aaatcagcgt tccaacgata ataattgcga tttgaaggat ggacgcgcga
    12301 atgtctccgc ctgtcgcaag gtaacccgaa agcactggtg gcgtcaccca cggaatcaaa
    12361 atataagttt ggctaatcca gccccatgaa gttgcgaagt atgccattgc agtcgaagct
    12421 agaggtgcaa taactaatgg aataccataa atcgggttga atacaactgg cagtccgaac
    12481 attagtggtt cgctgacgtt gaaaatactc ggaattaagc cgaattttgt gaccatgcga
    12541 tgatccggtc gtttagaagc aatgaaaatc gcgataacta aacagatgat ggttccgccg
    12601 ccacccatgt atacaaaagc atctaaaaac ggttgtgtaa cgatgttcgg taaagctgtc
    12661 cctgcattca ctgcatcaat attttgttgt aaagaagtta aaagaactgg tccagaaatc
    12721 gcgcctaata cgaatgcgcc gtgaatacca aagacccata agaatcccgc taaaaataca
    12781 taaagtagaa tacctggtaa cgtttggaac ccgccaacta atggaatttg tagtactttt
    12841 acgataattt ctggaatact cattgataca aaactaacta caagcacttc aataattgct
    12901 aaaatactta gaactaagaa tgatggaatt aaaatgttaa atgattttgc aattgccggt
    12961 ggaacacttt caggcataga gatttttaat tttttacttt tcgagaattt cgcaagcatg
    13021 gtaacactga ctaaagcagc gatgattgca aggaacattc ctgtcgaact tgtcatttct
    13081 tgggttaaaa cgccgccagc ctcaaaagct ttaccgtcaa ccgacattaa atgtgaagat
    13141 gccggtatta aaacaacata agcagctaca gcgataaccc cttccgtacg cccttccatt
    13201 ccgtatgatt tagctaaaaa gttaccaatt aagaatgctg ctaaaatcgc cataataccg
    13261 agtgtcgcgt tatagacttg aatacctaca cccaaataat tttctacatt tggaatgaat
    13321 ttaagcagac cattttctgg ttgaagtaac acgttattta caagcaagaa aaatgcggca
    13381 ataatcgtaa tcggaatcat cgctgcaaag ccatcacgaa ttgccatgat atgcttttgc
    13441 gatgaaattt tttgggcaaa aattgataat ccttcaataa atcggctaga taaacttctc
    13501 tctgaactca tttttttgtc ctcctatgac tttcctgtta ttttgtttaa atctgctaca
    13561 attgacatcc atttgccggc attaccgacc caaacttcct tataagttgc attattaaac
    13621 tccggccagt atggttcatc ttcatttcta aaagtttcca ttccgactgg tatttctcct
    13681 gtgatttcgc catttagtac actgtattgc tgtgcgtagc gataaccttc gccatgcatc
    13741 attgattgtc caaacgggtt cattccaatt acccactgta actgaccttc cgcaatatct
    13801 aaaagcgact tatctttcaa aatttttcca gcaatcgatg cggcttttcc tgccgaaagt
    13861 aaaatagcgt tatttcctct aaacgagaac caaattggga attttcgcaa cgctatctcg
    13921 tcgtttattt ggataccttg ctcgaattgt aattggtatt cttctatcgc ccgttcatct
    13981 atgagtaaat gttgtaagtg gaaacttgct tcgtctaaat actcatcttt tttataaagt
    14041 cctgctggaa taagcggata tggtttagtg aaacgtgtta cttttttcaa atagtcgccg
    14101 tacatttcga ccgcttgtag ccaagtttgt ttttcagcgt tactcggttg cgtttcaagc
    14161 gccgcctcaa gtgccagtaa ataaagatgt tcgcgtgctt gatgattaaa atgctgaatg
    14221 accttgtgcg ttttatcgcg gtagaaaaat cctttgtaaa gttcgctagt ttcgctgtct
    14281 ctaattccag ctttttcttg cgcttctagc atcaaatata accattcggc cgctttttct
    14341 gcatatattt ctttgtttgt tagttgataa accatcgaag ctgcccaaga agcagtcgca
    14401 taatatagac tttctgaggt ttgatacgta tgctcccaga aaatcggctt ttggctcgtt
    14461 ccgtgttttt ccagttcctt tatcgcaaaa agcaaatcct cttccgcgat tctcagcaaa
    14521 tgattctgca tagtagcatt atccgcaatt tggctgccaa tatacgcttc aatcccagca
    14581 caataaaagt tctcataagc ttggttatga acgcgcgcaa ttgcatcatc catcccacca
    14641 acaagcccat ccgtccatct cgtcatacct gcgctagtcg ctctaaaacc gtctccgaag
    14701 cgcgttttca aaataaaatc tagtccccac tcgccttctt ctaaaaggcg catccgcaac
    14761 atttcctctt tttcaggtaa actcgaagcc atttcatata aagccatcgt tacttccgcc
    14821 gtttgaataa gctgctgcga aacatcgccc gcatcgtgcc atccaccatt aaatgacaac
    14881 tgtttcccat cgtgttcagc gataatatct gcgtgacaag tcgtatgttt cccaaaaacc
    14941 gggcaaccgc atcgttcgca gaaaataaag ttaagcgatt tccagataga agattcccag
    15001 atcacttcgg aagtcccaat ttgaaaaatt tccgtttgca tatccgcaaa ttttaaatag
    15061 tattcaccca cagtttgtaa atcagaaaaa tcaagaataa tgaaatcgcc agtttctgtt
    15121 gcgttttggt aactttttcc agtaaaaaca actttgtctg tttctttgtc gtgaattgta
    15181 aaggaagtcg ctacaaactt gttggcgcaa aacgctactt tgggcatgcc cttagagtaa
    15241 ccgttatgcg aataaactag cgtattatct tgcggaatcc aacccttgga gatttccggc
    15301 tcactgattt gttctaattt aatttcatta atgaataatt ccattgttcc agcagtcaat
    15361 cgctctgggc cattcaagta ataactaaaa ctcatttcgg tcattcggtc acgcggcaaa
    15421 ccttcaattt caaaaatgac atcattccat tcatggttga ttaaattcac accgtgaaca
    15481 ccttctcgcc catatatatc aggcactttc acgctcccgt cgtttttaaa actaatcatt
    15541 aaatagggat ttgttactcc aggaaaatca gggaaaactt ggattcgcac acgattaaag
    15601 ccgctccagt cctcattttc aatcggggcc gatatggtaa cgttaccaaa attagtataa
    15661 tcaccgtcat ccggagcacc agcgggccaa tgcggcataa ccacaggcga agaaagcttg
    15721 atttcatctt ggtcagaaat agtaaaatct cctgctcctt gatgtgtaaa ctctaaagaa
    15781 acctgttgtt tagagctaaa taaagtccta cttgataaaa cttgtttctt tttcgctaaa
    15841 gtttctaacg catgcttggt ttcaataggg agtggtcgat gaataatacc agtttgcgca
    15901 atttgtcgtt tcatacttgg cttcattctt ttcctccttc atttcctagt ctcattccaa
    15961 taacggctgc accaattaag ccaaccttat ccttctcaag cttagagcga acaacacctt
    16021 ttgtaacaaa acgaattgta ttgctttgaa gattacctag tatcttttgg aaaaaatgct
    16081 cattttgtgt cacgcctccg ccaagaatta cgcattcagg gtcggttgta cggactaaat
    16141 tcataatcaa attagctagc tgaaacgttg cattatcaat aatttcctct gcaagctcat
    16201 ctttttgctc cgctgcatga agaaccattt ttccagttag ttctgtttcg gcttcagcaa
    16261 gtatggatgt cgggtagtta tttaaacgtc tcagtgcctc ttctttaatc ccaagaccgg
    16321 aagcaagtcg ttccacacaa ccacgtctac cgcaaccaca gagtacatca ctatgaatat
    16381 ctactacagc atgaccgatt tcacccgcgt taaagtgccc gccttgtata attcgtccat
    16441 ccaccacaaa cccagcagca agaccagtac caacatttaa ataaataaaa tcgtttgttt
    16501 cttgtcccca accaaattgc ttttcggcca ttgtggcaca aacaacatca ttgcccagac
    16561 ttacaggtaa tcctgttttt gcttctaaaa tgtctgcgag cggggttgga ttgctttttc
    16621 caggttcaat ctctaaccaa acacctgact tgtgattcac acgaccaact aatcctacac
    16681 caatacccgt ttgttttggt gctataaaac caatattttg cgtgtaatca tctaaaacct
    16741 ttaacaatat ttcggtagct ttggtctgat tctccgtatt acttgggtaa ctcttggaat
    16801 ttagcacctc accatctttt gttacttcgc caattaaaat tttagtgcca cctagatcaa
    16861 ttccgatgac agattcttgt atgtccaact attccacctc atttttggta acgttaccaa
    16921 attaaaacgt ttgttgatag cgctttctac catagaataa ccggatattt ttaatatgtc
    16981 aacccttttt attatatttt tgataacgtt accaaatttc acttgttatt tccccctaag
    17041 tacgctacac ttaaaatagt taaaaatgct tacgaggtga acatttcgaa tgaaaaaaat
    17101 aaccatacaa gaaatagcta aacttagcgg tgtctccgtt tcaactgttt cgcgggttct
    17161 taataacagt ccttctgtgt cagctgcgaa acgcaaaaaa atccaagcaa tcattgatga
    17221 acataattac acacctagcg tgtttgctcg tgggatggtc aataagcaga cgaagaatat
    17281 aggcgttatt ttaccagata tttccaatcc ctatttcatt tcacttataa cgcaaattca
    17341 aaaattcgcg ctagattata tgttttcgac gattttgttc aatacaatgc ttgcggagcc
    17401 aaataataag aataatcaac atcccctaac ggaagaagat tacctaaaaa tcattttaga
    17461 aaagcaagtg gatggtttac ttattttagg tggagaaatc gataaagaaa tcgttccaaa
    17521 agagtatata actgctctaa atcagttaaa taatgaaatt ccagttgttg ttatcgggtc
    17581 gaaaattcct gagctcaact gtttatttat tgaacgtaat ttaaaaaaag gggtaacaac
    17641 cttagttagt catctaactg cacttggaca caaaaatatt ggttttattg gcggagaatc
    17701 tggtgtaaaa atcaccacct accgtctaga atcttttaaa gaagcaatga ctagctatca
    17761 acatccggta aatgacgact gggtggttct gtctgattat tatacggctg atggctacgc
    17821 agcaatgact caacttttag aaaatagcgc tactttgccg acagcacttg tagctatcaa
    17881 tgacaatgtg gctatcgggg caattcgagc gattaatgat gccaaacttt cttgccctga
    17941 agacatcgct attgtcagct gcgatcaatt tatgaatggc gattaccaaa ctccgcgttt
    18001 aacttccatg gatcaacaca atgaatatct tggtaaaatg gctattttac aactaattag
    18061 cgcaattaac ggtcaagtcg agccaatgat tatcaaccat aatccagaac taattatccg
    18121 cgaatcttgc ggctctaagc tataacgaaa ggaaggtcca cttggaaaaa tacttaattt
    18181 gttctgattt agacgggaca ttactactta aaaaccaaac tatctcacca aaaacactaa
    18241 atttattgca acaactaata gaagaaggtc atcattttgc cgtttctacc ggtcgaatgt
    18301 ataattccgc aacagacttc gccaacctcg ttcatccaaa agcagatgtc attgcttcaa
    18361 acggcggtgt agttgcagta tcaggcgaaa ttatcctaca agaaaaaatg aaacaatctg
    18421 cgttactcga gacattttta ttgtgccaaa atcatgattt acctgtgttt ttcttttcaa
    18481 cagatactgt ttactacact aaaaatcccc catattattt tacggatgaa gaagataaag
    18541 gccgcgtaaa tgctacaaaa ctcgttccta tcaaaacaaa agaaagcttc cttgagcatg
    18601 cggaccagtt cattaatggg attgtaatcg aggaagaaga tttcgacaaa ctcgcagccc
    18661 ttcgaagtga gctagaaaaa ctatccgatg tttctatcct ttcttcccat gccaataata
    18721 tcgagatctt accaaaagat atggataaaa aatacgccgt gaaaaatctc gctgcacatt
    18781 taaatatcaa gccagaaaat gtaattactt ttggtgatgg tgaaaatgat attgggatgc
    18841 ttgaagttgc tggcgcaggg gttgcgatgg aaaatgcaag tgaactagtg aaaaaaagtg
    18901 ctgattttgt tactactgca aatgatgccg atggaattta ctactttttg aaaaaatatc
    18961 ttaatcgtta ataaaaaaag ctgcccacgc ggacagcttt ttttcattta ttcttctacg
    19021 gaagcagctt cttcatagtt aattaatgca attaatccgc caacagcaag tagtacgatt
    19081 ggcagtaaga acataatcga aattgacatt gtacagccaa ttgcagctgc caccatcatt
    19141 gccccaccaa gacgcggctt atgcgaaaca ataaacgatc ccgcaagtcc cactccagaa
    19201 agcacaagtg aaccaatcgt taacatatag aagaaaaatg actcctcttc taatgcctgt
    19261 gaaatatcag gaataactag aaccatcaaa ctaaatccaa tacccagtgc cgcccctaaa
    19321 aagccaagta atccttcaac tttcatgata aaaactcctt ttttatacgc attttctttt
    19381 atgttatcat tttaacaaaa aattgaatag ttatcagctt ggacaaatga tttttcgtaa
    19441 attacttcta aataagcaga cgattatgca aacaatttac cgttttctgt aaattcaaaa
    19501 aacaaattga ccagctcttt atattgtgat acgcttaaca agtggcgtta ttctaataga
    19561 ataggagatg attatcataa aaaatttcgc atcaaaaaac attagactaa ttatggcact
    19621 ggttattgga gtattggttt ttgcacctgt ttttcattca aaagccgctg ataataacat
    19681 tggtttcgat tttaaactca aaccaaattg cgctaactca gggtcaagct caaggtatag
    19741 agagacttct tctgtaaata acccttggaa agttcgcctc gataactcaa cagaaggaaa
    19801 gggtacaatt gcttcttttt ggctaggtac atataataaa aacaagaatg ctgtacaagg
    19861 ctcaacaata atgaatgtta aacaaggtgc aaaaacacgt tattgcggcg cttataaagt
    19921 agctaataaa aatacaacct atttagctgc tgaaaataat aattataatt ccaaaacata
    19981 ctatgtcgat ggtatttggg atgaggaaac ttggtaatta ttctaaccag gaaagggatg
    20041 tatttaactc cctttccttt ttaaaataac gaaacggagt acataaaatg aaaaatcagt
    20101 ttacctactt aattaacaat aaaactactc aagggatgt
//
LOCUS       DASDYO010000045        20115 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.045, whole genome shotgun sequence.
ACCESSION   DASDYO010000045 DASDYO010000000
VERSION     DASDYO010000045.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 20115)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 20115)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..20115
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.045"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(298..1518)
                     /locus_tag="U0290_001348"
     CDS             complement(298..1518)
                     /locus_tag="U0290_001348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003739666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chloride channel protein"
                     /protein_id="HEM2301393.1"
                     /translation="MKKVTLIFGIYTFILGIIVGIIAALFLAMVHFATTFLWDYLPNQ
                     FDFSWYYPLLIGLIGSFFVGMVQLKFGDYPRSMHDNVAEAKKTGRMEYRKVLFPTILS
                     AWIILTFGASVGPEAALIGIVGGATTWIIDHLKLSMAHKEELVSLSVGAIISSIFHAP
                     FSGLAEEIDESSQAKKIPKNSKLVLSLLISFSALGSFLWLKSFLKMPASIFAIRLPDM
                     GWSWWFILLFIPMIILGWLFSVYFQQLQVYIAKAASVIKNKMVAAVIGGLSIGLFGII
                     SSFMLFSGEHQLIELTTTVQNYSIPFLLIIGLLKPVLVAICLATGWNGGAIFPAIFTS
                     TIMGYIATFWMDGSTGFLITIFVTASCTKIIGKPVLTASILLFIFPLQFFPFILLTAF
                     IVNRNWLVNFKKTA"
     gene            complement(1630..2103)
                     /locus_tag="U0290_001349"
     CDS             complement(1630..2103)
                     /locus_tag="U0290_001349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="divergent PAP2 family protein"
                     /protein_id="HEM2301394.1"
                     /translation="MSIFTNTPLIASIIAIVFAQVVKVPIHILVYRKFNLGLMFSTGG
                     MPSSHSAAVTALMTTLAIEYGLDSPYFAIAVVFGIIVMFDATGVRRQAGEQAVVLNKL
                     VTDFQDFVEHAKGLAAPEQEEKTKHLKELLGHKPMEVFFGALTGIAIGFILEMFM"
     gene            2231..2602
                     /locus_tag="U0290_001350"
     CDS             2231..2602
                     /locus_tag="U0290_001350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PaaI family thioesterase"
                     /protein_id="HEM2301395.1"
                     /translation="MGLQETIGIEIVSVEKGKAVVQLEVTEKVHQPFGYLHGGVSVVL
                     AEHAASIGAAKSIEPDEIVFGLEINANHLASKQEGLVTATAEAIHLGKSTQVWEIKIT
                     DETEKLICISRCTIAVKKKRK"
     gene            complement(2647..3240)
                     /locus_tag="U0290_001351"
     CDS             complement(2647..3240)
                     /locus_tag="U0290_001351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit G"
                     /protein_id="HEM2301396.1"
                     /translation="MNVIIEIIISIMILIGGLLSILAAIGVIRLPDVYTRTHAAGISN
                     TFGVSLLLFATVGYFFHSGEGFNARVLLAVLFIFLTTPVASHLINRAAYDTGVPLAIR
                     IRDQLRSVKKDDIKKKKNLIIRQEQIEKARQEREELEERMEWERREEKIDEREDQEEQ
                     EREREEQTIEEQSDDSEHEIIEQDESETESDDDKTEK"
     gene            complement(3224..3511)
                     /locus_tag="U0290_001352"
     CDS             complement(3224..3511)
                     /locus_tag="U0290_001352"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit F1"
                     /protein_id="HEM2301397.1"
                     /translation="MIIQIALSIGLLLYSISTFLYLYRILKGPTTSDKVVALDSIGMN
                     LVAIVALLSMFYDTHAFLDVILLIALLAFIGTVSFAKFIEKGKVIDRERDN"
     gene            complement(3508..3987)
                     /locus_tag="U0290_001353"
     CDS             complement(3508..3987)
                     /locus_tag="U0290_001353"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit E"
                     /protein_id="HEM2301398.1"
                     /translation="MAFQLILNIILACLWMFLESSFSFATFIIGFIIGIFLLFFMRRF
                     LGSRFYLFRLFALVKLVFRFLHDLIVSTVHVSRIVLKKDMNIRPGIFRYDTTLETDWE
                     VTMLALLITLTPGTLSIDISDDYKAIYVHSLHVPNIEEEIATIRKSYEGAIMEVFHG"
     gene            complement(3994..5478)
                     /locus_tag="U0290_001354"
     CDS             complement(3994..5478)
                     /locus_tag="U0290_001354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit D"
                     /protein_id="HEM2301399.1"
                     /translation="MNNIILMPILIPFLGAITLMLLPKKVIIQRVFALIFSGILVVAT
                     LGLVFYIRENGITTVNIGNWAAPFGITMVGDMLAVLLTATTSIVLFCVILYSFYTIGK
                     PREKFLYYPAILFMIVGVNGSFLTGDIFNMFVFFEVMLMASYVLLVIGGTQVQLKATI
                     KYLLINVVGSGFFVVAIALLYSMIGTLNMADISQKITDLNGANTGMISVVAVLFLFVF
                     GLKAGLFPLYFWLPGSYFAPPIPVLALFGGLLTKVGVYAIIRTYTLFFSSLTDFVVPL
                     LGILAIVTIVLGVIGAISYYDMKTIVIYNIMIAIGVILFSVSIMTRESMTGAVFYLIH
                     DMIIKAALFLIVGIVMAITGYSSVKKFSGLMSVKPSLGWIFFIATLGLAGIPPLSGFI
                     GKLLIVEGAFSAGQIVGGIIILLSSLFVLMSLIKVFTKGFWGEKKGVFNLQIPYKKML
                     VPVVILLAISIGYGVFSNAIYPFIEQAVDPLVDPSVYIHAVIKE"
     gene            complement(5471..5818)
                     /locus_tag="U0290_001355"
     CDS             complement(5471..5818)
                     /locus_tag="U0290_001355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit C"
                     /protein_id="HEM2301400.1"
                     /translation="MELLMSILIGLIFAAAVYLILSKSLLRIIIGTAVLSHGVNLLVL
                     TMGGLKKGRVPILGTPGAGTYNDPLPQALILTAIVISFGVTAFFLVLAYRAYQELDSE
                     SVSKTRGHEADDE"
     gene            complement(5818..6243)
                     /locus_tag="U0290_001356"
     CDS             complement(5818..6243)
                     /locus_tag="U0290_001356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na(+)/H(+) antiporter subunit B"
                     /protein_id="HEM2301401.1"
                     /translation="MMKTNDVLLRNVTKVVAFIIFLFSLHLFFAGHYNPGGGFVAGLT
                     TAGAITLTLLAYDTKTVASMLNINTIMLTGVGLVFALGTGMIGIFTGDPFLTHKFGHV
                     DLPILGDTALHTATLFDLGVYLVVVGVTLTIIQTIGESD"
     gene            complement(6227..8635)
                     /locus_tag="U0290_001357"
     CDS             complement(6227..8635)
                     /locus_tag="U0290_001357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Na+/H+ antiporter subunit A"
                     /protein_id="HEM2301402.1"
                     /translation="MSFLHLAIVLPFIVALLIPLFYRWTKQVHTGWLVLPIPVILFIY
                     FLTFIPKTMDGATIVSMPWIPRLGINFTVVVDGLSLLFALLITGIGSLVTFYSIYYLG
                     KKKERLSNFYTFLFIFMTAMLGVVLSDNLIVLYLFWELTSISSFLLIGYWYHRERSRY
                     GARKSMMITVFGGLMMLGGFILLHIMSDSFSIREIISNADVISNNSLFIPAMILILLG
                     AFTKSAQVPFHIWLPDAMEAPTPVSAYLHSATMVKAGIYIVARFTPLFASSGVWFWTV
                     SLVGITTLFWGSLNATKKNDLKAILAYSTISQLGLIMALLGVGAASLHFDTLSDDIYV
                     MAIVAAVFHLFNHATFKGSLFMMVGIVDHETGTRDIRRLGGLMRIMPITATIAFIGTF
                     AMAGIPPFNGFLSKEMFFESMVNITQLQLFDASTWGVLLPVVAWVASVFTFVYSMIIF
                     FKTFTGKVKPYLLPKKPHEAPFGLLLPPIILSIFVVGIGLFPNLIAEPILEPAVRAIV
                     PGLSTDFSIHISLWHGFTPALLMTFGVVAVGIVLFLTHKYWKPWITTKVPKALRIGKT
                     YDNGMYYLEQGSYRMTMFIMTGWLRTYLNYMLSAFILMMASVMIFTQALDFNFSSMTK
                     VTVVDFVLAAVILVTLVGIVFSKSRITSIILLGAMGYTISIFFVISRAPDLALTQLII
                     ETISVVLYLLVFYHLPQFSNIEEKPKWLSMKTFLSIGVGVIITLVSLSAYNTTFYDSI
                     SKYYVDNAYVEAAGRNIVNVILVDFRGFDTMFETAVLSIAAIGIYAMIKLRLTKRGKN
                     DENE"
     gene            complement(8980..10191)
                     /locus_tag="U0290_001358"
     CDS             complement(8980..10191)
                     /locus_tag="U0290_001358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2301403.1"
                     /translation="MTTRTRNLYILMLANLLMSASMTMIMPFLSLYIETFGDYSNAYV
                     QRWAGYIFGVTFLIAFIFSPIWGRIGDKHGYKGILILTSVGLSICIFLMGFAHSVTYL
                     LILRIFMGVVTGFIGVSNAFIARQTPRNEAGKILGTLQLGGVTGMLFGPLIGGAMADL
                     FGFKDTFTITGIAMMVAALIVAFGVKEIRTEEQKEAAKVVYSRRAVLKQIFTLRVLFT
                     VMVITALIQIANFSVQPLLALYVGDMTQSDNIAFLSGLAFSATGFGNLVMTRKWGQLG
                     DKYGYEKILNILLIMAAVFVIPQAFATNLWVFIFFRFLFGIAIGGMVPCTTAYIRLAA
                     PGVMQGEMLGYNQSARFLGNVIGPILGGTLAGFTGIPSVFLFMSFMFLVAFFILLYAL
                     HSDRKRHVNVD"
     gene            10423..11007
                     /locus_tag="U0290_001359"
     CDS             10423..11007
                     /locus_tag="U0290_001359"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidylprolyl isomerase"
                     /protein_id="HEM2301404.1"
                     /translation="MTYPQLSKEVAPNEIEAEMITNRGTIRIKLFPEIAPKTVENFVT
                     HSKNGYYDGLIFHRVIPEFMIQGGDPDGRGTGGESIWGESFEDEFSTEAFNLRGALSM
                     ANAGPNTNGSQFFIVQKPDMPADMLGQMEQAGFPVEIIEAYKQGGTPWLDGRHTVFGH
                     VIEGMDVVDEIANLPTGMQDKPVNDVVIEKINIK"
     gene            11089..11484
                     /locus_tag="U0290_001360"
     CDS             11089..11484
                     /locus_tag="U0290_001360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301405.1"
                     /translation="MEKSHPIKINNQLIYGRDKTWLESLHQNTNQLIITVEIDFEDES
                     TLQKMVFNGLIFYSSTELDTYEKSKWSSSWLQSQSNFEIIEQSNLINERVKIRSDYNI
                     QDFKHYRISTYDYIIDVIAKNYQLKEAHK"
     gene            complement(11526..12887)
                     /locus_tag="U0290_001361"
     CDS             complement(11526..12887)
                     /locus_tag="U0290_001361"
                     /EC_number="2.7.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465897.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate kinase"
                     /protein_id="HEM2301406.1"
                     /translation="MKVIKFGGSSLASGIQLNKVFQLVAEDPDRKIVVVSAPGKRFKE
                     DTKVTDLLIDCAAKALLGEDTSELFESVIARYAGIALDTGMSDEIINQIRADLQATIS
                     SDKSDPDKFLDRMKASGEDNNAKLIAAYFKFKGLNANYINPKDAGLLVTDEHASAQVL
                     PESYDRLFALREREGIIVFPGFFGYTKDGEISTFSRSGSDITGAIVANGAQAELYENF
                     TDVDAVYAVNPAIVKNPKKVLELTYREMRELSYAGFSVFHDEALIPAFHAGIPVHIKN
                     TNNPDSCGTRVVHERENNNGPVVGIASDDGFCSIYISKYLMNREIGFGRKVLQILEDA
                     GLNYEHMPSGIDDLTIIIRENQFGEDTEQTIMSRLKEELNADQVIMQHGISLIMVVGE
                     TMRHNVGITSRASKALSDAKVNIEMINQGSSEVSIMFGVKEEQENTAVRALYNEFFSE
                     VFV"
     gene            13132..13446
                     /locus_tag="U0290_001362"
     CDS             13132..13446
                     /locus_tag="U0290_001362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465896.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2301407.1"
                     /translation="MKNIVLVCAAGMSTSLLVTKMRKAAEERGETCEIEAYSIAEVSN
                     LIDDADVVLLGPQVRYQKKTVDELAAGKIPVDVIDMAAYGTMNGEKVLGQALDLINGF
                     QK"
     gene            complement(13489..14169)
                     /locus_tag="U0290_001363"
     CDS             complement(13489..14169)
                     /locus_tag="U0290_001363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301408.1"
                     /translation="METLLSFDKVYKDYPSGPSIIHALKETNFEAKKGELIAIVGPSG
                     SGKSTLLSLAGALLTPTGGTISINGKSVGNLSSKEQTALRLEEIGFIFQAAHLVPYLH
                     VKDQISFIGKMAGKSAAELEKDTASLLSQLGISDRANFYPKDLSGGQKQRVAIARALI
                     NQPSVILADEPTASLDTERSREVVELIRNEVVQTSRTAIMVTHDERMLDLVNHVYRME
                     DGILTQES"
     gene            complement(14169..15272)
                     /locus_tag="U0290_001364"
     CDS             complement(14169..15272)
                     /locus_tag="U0290_001364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301409.1"
                     /translation="MFLGLRELVYSKLRYILVTGIMVLIMLLSLILSGLANGLAYDNA
                     SSVADNGVPYYVLSKDAQDKLSRSQFPESKLADVKKDANVKDAAVLGQSMQTLKRESD
                     DKKFSVALFGIQPDSFLAPKISDGANIQVTKPDEIVVDSSLKSDGIKIGDVLMDDILN
                     RELTVVGFTENQKYSHAPVVYINIATWQEINPVLYHQKIPQTSTIAIKTENPDKGVTL
                     SDKDLTTIDHKGFLNQIPGYSAEQMTLNMMIFFLIIIGGFILTAFFYVMTLQKTTQFG
                     ILKALGTKTSYLVKSIITQVVIISIISILISVGVTLILPSIMPAAMPFRLSPMTIALY
                     SGLFFLVALFGALLSLRRIAKVDALDAIRGGDE"
     gene            complement(15411..16577)
                     /locus_tag="U0290_001365"
     CDS             complement(15411..16577)
                     /locus_tag="U0290_001365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465893.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM2301410.1"
                     /translation="MSQFDEVIPRIGTNSEKWDGAEELFGRKNIIPMWVADMDFRAPQ
                     PVLDAFQRQIDHGIFGYSTKSAALVEAIIDWNKEQHQFEIDPSALFFNGAVVPTISLA
                     IRSLTNEGDAVLMVSPIYPPFFNVTKATERKVVMSPLIYENRQYRMDFNDLEKRMKEE
                     KVKLFLLCNPQNPGGRCFTKEELVELAKLCEKYQIPIVSDEIHADLVMKNHKHVPMMV
                     AAPFYQDQIITLMAATKTFNLAAIKASYYIITNKDYQAKFAAEQKYATTNGLNVFGIV
                     GTEAAYRHGVPWLKELKEYIYSNYEYVKAALEKEVPEVGVTDLEATYLMWLDCRALPK
                     DEKTIYADLIEAGVGVQMGSGFGHSGKGFVRFNIACPKETLEKAVKLLIQGLKK"
     gene            16731..17084
                     /gene="yugI"
                     /locus_tag="U0290_001366"
     CDS             16731..17084
                     /gene="yugI"
                     /locus_tag="U0290_001366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="general stress protein 13"
                     /protein_id="HEM2301411.1"
                     /translation="MSTFKVGDVVSGKVAGIQSYGAFVALDNSTQGLVHISEITHGFV
                     KDIHDFLEVGQEVKVKILDIDEEKNKISLSIRATEEAPKEQPTKKKQVSSSENDEGFN
                     TLRDKLEEWIKKADK"
     gene            17232..17639
                     /locus_tag="U0290_001367"
     CDS             17232..17639
                     /locus_tag="U0290_001367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM2301412.1"
                     /translation="MKRSIHVQAFVYNEKKDEILVVRDRNLTWAFPGGHVETNQTMEE
                     ALASKVKEQTNIDIEIESILHCKERRATWEHVCTFVFRAKPVGNALLASNDDNVFRVK
                     WIPIPLADDLLAVDQLSLNELVRSEGVLYENYT"
     gene            17741..19093
                     /locus_tag="U0290_001368"
     CDS             17741..19093
                     /locus_tag="U0290_001368"
                     /EC_number="5.3.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucose-6-phosphate isomerase"
                     /protein_id="HEM2301413.1"
                     /translation="MTHIKFDYSKALRFFEERELDYLEPAVKAAHDSLHNGTGAGNDA
                     LGWINLPTDYDKEEFARIKKATEKIHSDSDVLIVIGIGGSYLGARAAIETLNHSFYNV
                     LEKGARKTPQVFFAGNSISSSYLHDLIEVVGDRDFSVNVISKSGTTTEPAIAFRVFKE
                     LLIKKYGEEGAKKRIYATTDKAKGALKTLADNEGYETFVVPDDVGGRFSVLTAVGLLP
                     IAVSGVDIDALMNGAAAASKDFDKPELKNNIAYQYAAARNVLYRKGKVTELLISYEPG
                     LQYFNEWWKQLFGESEGKDKKGIYPSSANFSTDLHSIGQYIQDGRRNLFETVIKVDKP
                     RHNLTINKEDVDLDGLNYLAGETVDFVNTKAFEGTLLAHTDGEVPNFVVEVPELDAYT
                     FGYLVYFFEKAVAISGYLNGVNPFDQPGVEAYKANMFALLGKPGFEDKKAELEKRLND
                     "
     gene            19198..19956
                     /locus_tag="U0290_001369"
     CDS             19198..19956
                     /locus_tag="U0290_001369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2301414.1"
                     /translation="MLSIERKRAIVQYVKSRKIATVSELAKHFEVHEATIRRDLTSLE
                     KDKKLKRTHGGVMIEEKVVSEPNWKKRSEVRYEEKQRIATLAATMVKDGDTIILDAGT
                     TTGHIATALKDRSKLTVITNDINVASIMRFSPSKVIVTGGVIYPETFILNGMITSGTL
                     QSIHVHKAFVTTPALDIDKGLMHYDEYLIPAKQQMLHSADEVILVTDHTKFGRISLYK
                     YAALDEISSIITGKEIDPVLKEQFEEKGMQIYTT"
BASE COUNT         6967 a         4199 c         3550 g         5399 t
ORIGIN      
        1 aataaacaat aagaaccttt ataatgagtt aattaagtat gacttgtccg cagaagaaag
       61 aatagtctat gccctccagt acctatgtga caaattagaa attgaaagtg aaaatggcta
      121 ccaacaaata cctaaatata ttaataagat aaaaatggcg aaatacggca aaatatctcg
      181 caaacaacta aacgaaaaaa taatacttct cctcgataag gaagtattaa aagaaaaaaa
      241 aggaagattc tatataaaaa aatcagcata aaaaaactaa ggatttctcc ttagttttta
      301 tgctgttttt ttgaagttaa ctaaccaatt tctattcact ataaatgcag ttaataaaat
      361 aaatggaaag aattgaagtg ggaatataaa taataaaata gaggcagtta gaactggttt
      421 tcctatgatt tttgtacaac ttgcagtaac aaaaatagtg attaagaaac cagtcgatcc
      481 atccatccaa aatgttgcta tgtaacccat aatcgtacta gtgaaaatcg ccgggaaaat
      541 tgcaccgcca ttccagccag ttgctaaaca aatagcgacc aaaacaggtt ttaacaagcc
      601 gataataagt aaaaagggaa tcgaataatt ttggacagtt gttgtcaatt caatcagctg
      661 atgctcacca gaaaataaca tgaaggaaga aattatccca aataaaccaa tgctcaaacc
      721 gccaataacc gccgcgacca ttttattttt aatgacagaa gctgccttcg cgatatagac
      781 ttgcaattgc tggaaataaa cactaaagag ccatccaaga ataatcatag ggataaaaag
      841 taaaataaac caccaagacc aacccatgtc aggtagccga atcgcaaaaa tactcgctgg
      901 catttttaaa aaggatttca gccaaaggaa agatccgagc gcgctaaaag aaataagaag
      961 cgataacact aatttagagt ttttgggaat tttcttcgct tgactacttt catcaatttc
     1021 ctcggctagt ccgctaaacg gagcgtggaa aatactggaa ataatcgcgc cgacactcaa
     1081 actaacaagt tcttccttat gcgccataga taattttaaa tggtcaataa tccaagtcgt
     1141 ggcaccacca acaataccaa tcaaagcagc ttccggacca acgctcgccc caaatgttaa
     1201 aataatccaa gcgctaagta tcgtaggaaa cagaactttg cgatattcca tccgtcctgt
     1261 tttcttcgcc tcagcaacat tgtcatgcat cgaccgcgga tagtcaccaa atttcagctg
     1321 aaccattcct acaaaaaaac tcccaatcaa accgattagt agaggataat accatgaaaa
     1381 atcaaactga ttaggaagat aatcccataa aaaagtcgtg gcaaaatgaa ccattgctaa
     1441 aaataaagcg gcaattattc ccactatgat tccgaggata aaagtataaa tgccaaaaat
     1501 aagtgttacc tttttcactg aaactcgccc cttttgtaaa atctgttgat atcatgattt
     1561 tccctctaac ataaagctgt aaactaacga caaacaaaaa aagttgacta caaggagtca
     1621 acttttcatt tacataaaca tttctaaaat gaatccaatc gcaatcccgg taagtgctcc
     1681 gaagaaaact tccatcggtt tatggccaag taattctttt aaatgcttcg ttttttcttc
     1741 ttgttcaggt gccgcgagcc cttttgcatg ttccacgaag tcttggaaat ccgttactaa
     1801 tttgtttaaa acaactgctt gttcaccggc ttgtcttcta acgccagtcg catcgaacat
     1861 cacgataata ccaaatacaa cagcaatcgc gaaataaggt gaatcgagcc cgtattcaat
     1921 tgcgagtgtt gtcattagcg cagtaaccgc agccgagtga gagctaggca taccaccagt
     1981 ggaaaacatt agtccgaggt taaactttcg gtatactaaa atatgaatcg gaactttgac
     2041 cacttgggca aacacaatcg caataataga tgcaattaat ggtgtattcg taaatatcga
     2101 catcaaatct ctcctgtcaa aaagtctatt cttattttac cacaatgagc ttattaaaaa
     2161 ccttttctag agtttttcta ccaactctta tataataaag tataaatcaa attcggaaag
     2221 aagggaacat atgggacttc aagaaactat tggcattgaa attgtttcag tagaaaaagg
     2281 aaaagccgtt gttcaattag aagtgacaga aaaagtccat caaccgtttg gctatttgca
     2341 tggaggggtt tctgttgttt tagcggaaca tgcagcaagt attggtgctg ctaaatcaat
     2401 cgaacccgat gaaatcgtct ttggtttaga aattaatgcc aatcacttgg catcaaaaca
     2461 agaaggatta gtaacagcga ctgcagaagc aatccacctt ggcaaaagta cccaagtatg
     2521 ggaaattaaa atcactgacg aaacggaaaa actaatttgt attagcagat gtaccatagc
     2581 agtcaaaaag aaacgaaaat aaaaagcatg gcagaggtca attgatgaac tcgcgccatg
     2641 ctttttttat ttctccgttt tatcatcgtc tgattcagtt tcactttcat cctgctcgat
     2701 gatttcatgc tcggaatcat ccgactgttc ttcaatcgtt tgttcctcgc gttcccgttc
     2761 ttgttcttct tgatcttcac gctcatcgat tttttcttcg cgtcgttccc attccattcg
     2821 ttcttccaat tcttcccgtt cttgtcgtgc tttttcaatt tgttcttgac ggataataag
     2881 atttttcttt ttcttaatat cgtctttttt caccgaacgc aattggtcac gaattcgaat
     2941 agctagcgga acaccggtat cataagcagc ccggttaata aggtgagaag ccactggtgt
     3001 agttaagaaa ataaacaata cggccagaag tactcgagca ttaaaacctt cgcctgagtg
     3061 gaaaaagtaa ccaaccgttg caaacagaag taagctaacg ccaaatgtat tactaatccc
     3121 ggcagcatgc gttctagtgt acacgtcagg caatctgata accccgattg cggcaagaat
     3181 actaagcaaa ccgccaatta aaatcataat agaaataata atctcaatta tcacgttcac
     3241 gatcaatcac cttccctttc tcaataaatt tggcaaagga aaccgttccg ataaatgcaa
     3301 gaagcgcaat aagtaaaata acatccaaaa aggcatgcgt atcataaaac atcgaaagta
     3361 gcgctacaat ggccactaag ttcattccaa tagaatccag cgccaccact ttgtcagaag
     3421 tagttggtcc ttttaaaata cggtaaagat ataagaaagt tgaaatcgaa tagagaagta
     3481 aaccaatgga taaagcgatt tgaataatca tccgtggaac acctccataa tcgcgccttc
     3541 ataagactta cgaattgttg caatttcttc ttcaatatta gggacgtgaa gcgagtggac
     3601 atagattgct ttataatcat ccgaaatatc aatcgaaagt gtcccgggcg ttaacgtaat
     3661 cagtagtgcg agcatcgtca cttcccagtc tgtctcaagc gtcgtatcat atctgaaaat
     3721 ccccggtcga atgttcatgt ctttctttaa aacaatccga cttacatgaa ctgtagaaac
     3781 aattaaatca tgcaaaaagc ggaaaaccag tttgacaagg gcgaataacc ggaaaaggta
     3841 aaatcttgat ccaaggaaac gtcgcataaa gaatagcaag aaaatcccga tgataaagcc
     3901 aatgataaat gttgcaaaac taaatgatga ctcaagaaac atccacaaac aagcaagtat
     3961 tatattaaga ataagttgaa aagccatctt ttatcactcc tttatcaccg catggatata
     4021 aacagaaggg tcaacaagag ggtcaaccgc ctgttcaata aacggataaa ttgcattact
     4081 aaacacacca taaccaatcg aaatcgcaag tagaataact actggcacaa gcattttttt
     4141 atacggaatt tgtaaattga atacgccttt tttctcgccc cagaagcctt ttgtaaagac
     4201 tttgattaaa gacataagga cgaataagct ggataataag atgatgattc cgccaactat
     4261 ttgaccagca gagaaagcac cttccacaat caataatttt ccaatgaagc cgctaagagg
     4321 tggaattcct gcaaggccaa gagtagcaat gaagaaaatc caaccgagcg aaggcttcac
     4381 gctcatcaac ccactgaatt tttttacact agaataacca gtaatcgcca tcacaatccc
     4441 gacaataagg aacagcgcgg ctttaataat catatcgtga atcaagtaaa agacagcacc
     4501 agtcattgat tcgcgtgtca taatcgaaac gctaaacaga ataacaccaa tcgcaatcat
     4561 aatattataa atcacaatcg ttttcatatc atagtaacta attgccccaa taaccccaag
     4621 aacaatcgtc acaatcgcga gaattccaag tagcggaaca acaaaatctg ttaacgaact
     4681 gaaaaatagt gtgtatgtcc ggataattgc ataaacccca acttttgtca gaagtccacc
     4741 gaacaaagca agcaccggaa ttggtggagc aaagtaagat cctggtagcc agaagtaaag
     4801 cgggaatagt cctgctttta gtccgaatac aaacaagaac agaaccgcga caacgctaat
     4861 cattcctgta tttgcaccat ttaagtccgt gattttttgc gaaatatccg ccatgttgag
     4921 cgttccaatc atcgaataaa gtagcgcaat tgctacaacg aaaaatccgg aaccaaccac
     4981 attaatcaac aagtatttaa tcgtcgcttt gagctgaact tgagtcccac caatgacaag
     5041 tagtacataa gacgccatca acataacttc aaagaatacg aacatattaa aaatatcgcc
     5101 agttaaaaac gaaccattaa ccccaacaat cataaagaga atcgctggat aataaagaaa
     5161 tttctctcgt ggtttcccaa tcgtataaaa agaataaaga atcacgcaga ataaaacaat
     5221 actcgtcgtt gccgtaagca agacagcaag catatcgcca accatcgtaa tcccaaaagg
     5281 agccgcccag ttaccaatat tcacagttgt aatcccgttt tctcgaatat aaaatacaag
     5341 tccaagtgtc gctacaacca aaataccact aaaaataagg gcgaataccc gttgaatgat
     5401 tacttttttc ggaagcaaca ttaacgtaat tgctccaagg aaaggtatca aaatcggcat
     5461 taaaattata ttattcatca tcggcttcat gtcctctcgt cttggataca ctctcgctat
     5521 caagctcctg atacgctcta taagcaagaa caaggaaaaa ggcagttaca ccaaagctta
     5581 taacaatcgc agtcaaaata agtgcttgtg gaaggggatc attatacgtt cccgctcccg
     5641 gtgtaccaag aattggcacg cgaccttttt tcagtccacc catcgtaagt acaagcaaat
     5701 tgacaccgtg gcttaggaca gccgttccaa taataatccg tagcaaactt ttagagagaa
     5761 ttaagtagac agcagctgca aaaatcaagc cgattaatat agacattaat agttccatca
     5821 gtcactctcc ccaatcgttt gaattatcgt aagtgttaca ccgacaacaa ctaagtaaac
     5881 cccaaggtca aacaaagtcg ccgtgtgtaa cgcagtatct cctaaaatgg gcaaatcaac
     5941 atgaccaaat ttatgcgtta agaaaggatc tcctgtaaaa atcccaatca tcccagtacc
     6001 aagggcgaat acaagcccaa ccccggtaag cataatcgta ttgatattaa gcatactagc
     6061 caccgttttt gtatcataag caagtagtgt taatgtaata gcaccagccg ttgtaagccc
     6121 ggccacaaac ccgccaccag gattataatg tcctgcaaag aataaatgga gtgagaataa
     6181 gaaaataatg aaagcaacta ctttcgttac atttctcagt agaacatcat tcgttttcat
     6241 cattcttacc tcgtttcgtc agtcgtaatt taatcatcgc gtaaatacca atcgccgcaa
     6301 tcgaaagcac agctgtctca aacatcgtat caaaaccacg gaagtcaact aagataacat
     6361 ttacaatatt tcgtcccgcc gcttccacat aagcattgtc cacatagtac ttcgaaatcg
     6421 aatcataaaa tgtcgtatta tacgctgaaa gagagacaag ggtaataatt acaccaaccc
     6481 cgatactcaa aaatgtcttc attgataacc atttcggctt ttcctcaata ttactaaact
     6541 gaggaagatg ataaaacaca agtagataaa gcacaacgga aatagtttca ataataagct
     6601 gtgttaaagc aagatctggt gctctagaga taacaaagaa aatactaatc gtgtatccca
     6661 ttgctccaag taaaataatc gaagtaatcc gcgatttgga aaagacaatc ccaaccaacg
     6721 tcactaaaat cactgccgct aaaacaaaat caacaactgt cactttcgtc atacttgaga
     6781 aattgaaatc aagtgcttgt gtgaaaatca tgaccgaagc catcattaaa ataaaagccg
     6841 ataacatgta attcaagtaa gtccgaagcc aaccagtcat aataaacatt gtcatacgat
     6901 acgagccttg ttctaaataa tacatcccat tatcatacgt tttcccaatt cgaagtgctt
     6961 ttggaacctt agtcgtaatc caaggtttcc agtatttatg tgtaagaaac aagacaatcc
     7021 ccactgcaac aacaccgaac gtcattaaca gagcaggcgt aaagccgtgc cacaaactaa
     7081 tatgaatcga gaaatccgta gaaagcccag gaacaattgc tcttacagca ggctccaaaa
     7141 tcggctccgc aattaaatta gggaagagac caataccaac cacgaaaatc gataaaataa
     7201 tcggtggtaa aagtagtccg aatggcgctt catgcggttt tttcggaagt aagtacggtt
     7261 tcacttttcc agtaaatgtt ttaaagaaaa taatcatact ataaacaaac gtaaacacac
     7321 tagcaaccca agctacaaca gggagcagaa cgccccaagt acttgcatca aacaattgca
     7381 attgcgtaat atttaccatg ctttcaaaaa acatctcttt acttagaaat ccattaaacg
     7441 gtggaatacc ggccattgcg aaagttccga taaacgcaat cgtcgccgta atcggcataa
     7501 ttcgcattaa gccaccaagt cgcctaatat cccgcgtccc tgtttcatga tcgacaatcc
     7561 caaccatcat aaacaaacta cctttaaatg tcgcgtgatt aaatagatgg aacacagctg
     7621 cgacaatcgc catcacataa atatcatcac taagcgtgtc aaagtgaagg gaggcagcac
     7681 cgacaccaag aagcgccata atgagaccaa gctgacttat cgtcgaataa gccaaaattg
     7741 cttttaaatc atttttcttc gtggcattaa gtgaacccca gaaaagggtc gtaatcccaa
     7801 cgagtgatac cgtccaaaac catacacccg aacttgcaaa tagtggcgtg aaccgagcga
     7861 caatataaat cccagctttt accatcgtag cagagtggag gtaggcactg accggagtag
     7921 gagcttccat cgcatctggc aaccaaatat ggaatggaac ttgcgcagat ttcgtaaatg
     7981 ccccaagcaa gataagaatc atcgcaggaa tgaataaact attattacta attacatccg
     8041 cgttactaat aatctcccga atggaaaaag aatcgctcat aatatgaagc aaaataaatc
     8101 cgccaagcat catcagtccg ccgaagactg taatcatcat cgatttacga gccccgtacc
     8161 gtgaacgctc acgatgatac caatacccaa tcaataagaa cgaactaatg gaagtaagct
     8221 cccagaaaag atacaacaca atcaagttat cactcaagac aaccccgagc attgccgtca
     8281 taaaaataaa taaaaatgta tagaaattgc taagtcgttc tttctttttc cctaaataat
     8341 aaatagagta aaaggtaacg agtgaaccaa tccccgtaat aagtagcgca aacagcaaac
     8401 taagcccatc tactactacc gtaaaattaa tcccaagtcg cggaatccaa ggcattgaaa
     8461 caatcgttgc cccgtccatc gtttttggga taaatgttaa gaagtaaata aacaaaatca
     8521 ctggaattgg aagtactaac cagccagtat gaacttgttt ggtccaccgg taaaaaagtg
     8581 gaattagcag tgccacaata aatggcagaa caattgctag atgaagaaat gacaaaatcg
     8641 gctcctcctc gaagaatttt tatacggaaa ctcatcctgg aaatgtgaaa ataaaaacag
     8701 gaaatcatta ttttttaagc aagtacttac atttaatgaa acatagttat aactaaaatt
     8761 ttagaaaacc gtgctaactc atcaaatttc aacaacttta ctattcacga agtacccaaa
     8821 taaacgccgt actttttata ttttttatta taacatactt ttttatctga aaaaaaggca
     8881 ggaaacttaa ctttataaat caatttaccg aaatttaaaa aacaatttaa taggaagaac
     8941 aaaaaaacaa acctaagaaa aaacttaggt ttgtcaaatt caatccacgt tcacatgccg
     9001 tttccggtcg gaatgaaggg cataaagcaa aatgaaaaat gccacgagga acataaaact
     9061 cataaataag aacacactcg gaattcctgt gaaaccagcg agcgtcccac cgaggattgg
     9121 tccaataaca tttcctaaaa agcgagcact ttgattatag ccaagcattt cgccttgcat
     9181 aacaccaggc gccgcaagcc gaatataagc tgtcgtacat ggcaccatac caccaatcgc
     9241 aatcccgaat aaaaagcgga agaagataaa cacccaaaga ttcgtcgcga atgcctgtgg
     9301 aataacaaaa acagccgcca taatcaacaa tatatttagt attttctcat acccatattt
     9361 gtctccaagc tgtccccatt ttcgcgtcat caccaagttc ccgaatcccg tcgcagaaaa
     9421 cgccagcccg gacaagaaag caatattgtc tgattgcgtc atatctccta cataaagcgc
     9481 aagcaacggt tgaacactaa agttcgcaat ttggataagt gctgtaataa ccatcaccgt
     9541 gaatagaact cgtagcgtaa aaatttgttt taaaactgca cgacgagaat aaacgacttt
     9601 ggcagcttct ttttgttctt ctgtacgaat ttccttgaca ccaaaagcga caattaaagc
     9661 cgcaaccatc atcgcaattc cggtaattgt aaaggtatct ttaaagccaa ataaatccgc
     9721 catcgcgccg ccaatcaagg gaccaaacag catcccagtc acgcctccga gttgcaaagt
     9781 accgagaatt tttccagctt cattacgagg agtttgccgt gcaataaagg cattactaac
     9841 gccaataaag ccagtcacaa cccccatgaa aattcgtaaa atcagtaagt aagtgacaga
     9901 atgcgcaaat cccatcagaa aaatacaaat cgataaacca actgaagtca gaatcaaaat
     9961 ccctttataa ccgtgcttat caccaatacg tccccaaatc ggcgaaaaga taaaggcaat
    10021 taaaaatgtt acgccaaaaa tataaccggc ccacctttgc acgtaagcat tgctataatc
    10081 accaaatgtt tcaatgtaaa gagataaaaa aggcataatc attgtcatac tggctgacat
    10141 caacaggttt gccagcatta agatgtacaa attccgtgtt cgagttgtca taaaagaatc
    10201 atctctattc gtattattgt taaaactgtc cttttcatta tagaataaaa gatagcgaat
    10261 gaaaaataaa gtgaaggatg tgcatttttg gttaaaaaaa ttgtcatttg ggtttcagct
    10321 gttatactag tactgtatct gattgctgtc gttgttaatt tgcttattat ttggctacgt
    10381 tagtaaacaa taaatttaaa caaaagaagg agtttttaca atatgactta cccacaatta
    10441 tcaaaagaag tggcacctaa cgaaattgaa gcagaaatga ttacaaaccg aggaactatc
    10501 cgcatcaaat tgttccctga aattgcacca aaaacagtag aaaactttgt tacacattcc
    10561 aaaaacggct actatgatgg ccttattttc caccgtgtta ttcctgaatt catgatccaa
    10621 ggtggcgacc cagacggccg tggtactggt ggcgaaagta tttggggcga atcttttgaa
    10681 gatgaattct ctacagaagc tttcaattta cgcggagctt tatccatggc aaacgctggt
    10741 ccaaacacaa acggcagtca attcttcatc gttcaaaaac cagatatgcc tgctgacatg
    10801 cttggtcaaa tggaacaagc tggcttccca gtagaaatta tcgaagctta caaacaaggc
    10861 ggaacaccat ggttagacgg ccgccacaca gttttcggtc acgtaatcga aggcatggac
    10921 gtagtagacg aaatcgccaa cctaccaact ggcatgcaag acaaaccagt gaatgatgtt
    10981 gtgattgaga agattaatat taaataacta tacttagagc actttcatag aaagtgctct
    11041 tttcgagtga acttttaata gtaatttcag ataggagttg agaaatctgt ggaaaaatcc
    11101 cacccaataa aaatcaacaa ccaactaatt tacggcagag acaaaacatg gcttgaaagc
    11161 ttacaccaaa acaccaacca acttataata acggttgaaa ttgattttga agatgaaagc
    11221 acgctccaaa aaatggtttt taacggactt attttctatt catccaccga actcgacacc
    11281 tacgaaaaaa gtaaatggag ttctagttgg ttacaaagcc aaagcaattt cgaaataatc
    11341 gagcagtcaa atttaataaa cgagcgagtg aaaataagaa gtgactacaa catccaagat
    11401 ttcaagcatt accggattag tacgtatgac tacattattg atgtaatagc aaaaaactat
    11461 caattaaagg aagctcataa ataaaacaag tttctcgtca gctaagatga gaaacttgtt
    11521 ttattttaaa cgaatacttc tgaaaagaat tcattatata gtgcgcgaac cgcagtattt
    11581 tcctgctctt ccttcacgcc aaacattatg ctcacctcag aagaaccttg attaatcatt
    11641 tcaatattta ctttcgcatc ggataaagct tttgaagcac gagacgtaat cccgacatta
    11701 tggcgcatgg tctcaccaac aaccataatc agcgaaatcc cgtgttgcat aatcacttga
    11761 tctgcgttca attcttcttt caaacgagac ataattgtct gctcggtatc ttcgccaaac
    11821 tgattttcgc gaataataat cgttaaatca tcaatcccag acggcatatg ttcatagttc
    11881 aacccagcat cttccagaat ttgcaacact ttccgtccga agccgatctc tcggttcatc
    11941 aaatatttac taatataaat gctacaaaag ccgtcatcac tagcaattcc aacgactgga
    12001 ccattgttat tttcgcgttc atgaacgaca cgcgtaccac aagaatcagg attgttcgta
    12061 tttttaatat gcaccggaat acctgcatgg aaagccggaa ttaaagcttc atcatgaaaa
    12121 acagagaagc cggcatatga aagttcacgc atttcccggt aagttagttc aagaactttc
    12181 ttcggatttt tcacgatagc gggattgact gcgtagactg catccacatc cgtaaagttc
    12241 tcgtataact cggcttgggc gccgtttgcc acaatcgctc cagtaatatc agagccactt
    12301 ctagaaaacg tgctaatttc gccgtctttc gtataaccga aaaatcctgg gaaaacaata
    12361 atgccttctc tttctcgaag tgcaaacaaa cgatcatagg attctggtaa aacttgcgca
    12421 ctagcatgtt catctgtcac aagtaaaccg gcgtcttttg gattaatata attggcgttt
    12481 aagcctttaa atttaaagta agcggcgatt aattttgcgt tattatcttc gccactagct
    12541 ttcattcgat ctaaaaattt atcaggatcg cttttgtccg atgagatagt tgcttgtaaa
    12601 tctgcgcgaa tttgattgat aatttcgtcg ctcatccctg tatctagcgc tatccctgca
    12661 tatcttgcaa tgacagattc aaacaattca cttgtatctt ccccgagaag tgcctttgcc
    12721 gcgcaatcaa taagtaggtc agtcactttt gtatcttcct tgaaacgttt acctggtgca
    12781 gaaacaacaa cgattttcct atcaggatcc tccgctacaa gttggaaaac cttatttaat
    12841 tggatccccg atgctaaaga gcttccgcca aatttaatta ctttcatgca acacactcct
    12901 gatctgaatt ttttagcttc cgaaagcgtt gtttttggat gatgcgaaat tttctgacct
    12961 ttcggataaa gttattgtct attatcgctc tttttccgtg aaatcgcaat gttttttcgt
    13021 gtttttaatt attttctctc gactccagta gtttacttgt ttaaaaagct aaaggtagtt
    13081 ataataagag tgtacaaaaa aagcagcctt aatctgaaag gaaagattac gatgaaaaat
    13141 attgttttag tatgtgcggc agggatgtca acaagccttt tagtaacaaa aatgcgtaaa
    13201 gcagcagaag aacgcggaga aacttgtgaa attgaagcgt actccattgc tgaagtaagt
    13261 aacttaattg acgatgcaga tgttgtactt ttaggaccac aagtgcgtta ccagaaaaaa
    13321 acagttgatg aactagctgc tgggaaaatt ccagtagatg taatcgacat ggcagcttac
    13381 ggtacgatga acggtgaaaa agtactaggt caagcattag acttaatcaa cggtttccaa
    13441 aaataaacaa taaaaaaacc tgtgtggcac ttaagccacg caggtttttt agctttcttg
    13501 ggtaagtatt ccgtcttcca tacgatacac atggttgact aaatctagca tacgctcatc
    13561 atgtgttacc atgattgctg ttcggcttgt ttgcacaact tcattccgta taagctcgac
    13621 aacttcacga cttctttcag tatcaagact cgcagttggt tcgtcggcta aaataacgga
    13681 aggttggttg ataagagcac gagcaatagc gacacgttgc ttttgaccgc cagataaatc
    13741 ttttggatag aaatttgcgc gatcactaat gccaagttgg cttagaagtg aagctgtatc
    13801 tttttcaagc tccgccgcac ttttcccagc catttttcca ataaagctga tttgatcttt
    13861 tacgtgtaaa taaggaacta agtgagctgc ttggaaaata aagccaattt cttctaaacg
    13921 aagagcagtt tgttctttgg aagataaatt cccgactgat tttccgttaa tagaaatcgt
    13981 tccgccagtc ggtgttaata gcgctccggc aagagaaagc agtgtacttt taccagaacc
    14041 actcggacca acaatcgcga ttagttcacc ttttttagct tcaaagtttg tttccttcag
    14101 tgcatgaata attgaaggac cggacgggta gtctttatac actttatcaa aagatagtag
    14161 agtttccatt attcatcacc tcctcgaatg gcatctaacg catctacttt agcaattcgt
    14221 ctaagtgata gaagggcgcc gaatagagca actaagaaga acaaaccact ataaagcgca
    14281 atcgtcatcg gacttaatct aaatggcatc gctgctggca tgatacttgg taaaatcagc
    14341 gttacaccga cactaattaa aatactaata atcgaaataa tcaccacttg agtaataatg
    14401 ctcttaacta agtaacttgt tttcgttcca agtgctttca aaataccaaa ttgcgttgtt
    14461 ttttgaagcg tcataacata gaagaatgcg gttaaaataa atccgccaat aatgattaag
    14521 aagaaaatca tcatattaag cgtcatttgt tccgcggaat aacctggaat ttgatttaag
    14581 aaacctttat gatcaatcgt tgttaaatct ttatccgaaa gggttacgcc tttatcagga
    14641 ttttctgttt taatcgcaat agtacttgtt tgcgggattt tttggtgata taaaacagga
    14701 ttgatttctt gccaagtcgc gatattaata taaacaacgg gagcatggct atatttttga
    14761 ttttccgtaa agccgacaac cgttaattct ctattcaaaa tatcatccat caaaacatcg
    14821 ccaattttga ttccgtctga tttcaaggaa gaatcaacga cgatttcgtc aggttttgtc
    14881 acttgtatgt tagctccatc agaaattttt ggagcgagaa agctatctgg ttgaataccg
    14941 aaaagtgcga cgctaaactt tttatcgtca ctttcccgtt ttaacgtttg catagattga
    15001 ccgagaaccg cagcatcttt tacattcgca tcttttttca catcagcgag tttggattct
    15061 gggaactgag atcgagataa tttgtcttgg gcgtctttgc tgagaacata atatggaacc
    15121 ccgttatctg ctacagatga agcattatcg taagccagcc cgtttgccaa ccctgataaa
    15181 ataagtgata gtaacataat taagaccatg atgcctgtta ctaaaatata gcgcaactta
    15241 gaataaacta attcacgaag ccctaaaaac atcgattata ccaactcctt taaatttatg
    15301 taaacggaaa atgaacacta tttcactttc caaagaatag tataccaaag ctatattcaa
    15361 tttcctaaag aaagaaacta agtgtttgct acttagtttc tcaaaataag ctattttttt
    15421 aagccttgaa tcagaagttt cacagctttt tctaaagttt cttttggaca ggcgatgtta
    15481 aaacggacaa agcctttccc ggaatgtcca aatccagaac ccatttgaac accaacacca
    15541 gcttcgatta aatcagcata aatcgttttt tcgtcttttg gaagagcgcg acaatcaagc
    15601 cacatcaagt aggttgcttc taagtcggtc acaccaactt cgggtacttc tttttcgagt
    15661 gctgctttga catattcata gttgctataa atatattctt tcaactcttt tagccaaggc
    15721 acgccgtggc gatacgctgc ttctgtacca acaatcccaa agacattgag cccattagtt
    15781 gtggcgtact tttgctccgc agcgaatttg gcctgataat ctttattcgt aataatatag
    15841 taggaagctt taatcgccgc caagttaaat gttttcgtag ccgccattaa agtaataatt
    15901 tgatcttgat aaaacggtgc tgcgaccatc attggcacat gtttatgatt tttcatcact
    15961 aagtcagcat gaatttcatc cgaaacaatc ggaatttggt atttctcaca tagtttcgct
    16021 aattccacaa gttcttcctt ggtaaaacaa cgaccaccag gattttgcgg attacataga
    16081 aggaataatt ttaccttttc ttctttcatc cgtttttcca aatcattaaa atccattcga
    16141 tattgacggt tctcatatat aagtggcgac ataaccactt ttctctcagt ggctttcgtt
    16201 acattgaaaa atggtgggta aatcggcgaa accattagaa ctgcatcgcc ttcatttgtg
    16261 agagagcgaa tcgctaacga aattgtcgga acaaccgctc cattaaaaaa taacgcgctc
    16321 ggatcgattt caaactgatg ctgctctttg ttccaatcga taatagcttc gacaagtgcc
    16381 gctgacttgg tcgaataacc aaaaatccca tgatcgattt gacgctgaaa tgcatcaagt
    16441 acaggctgcg gcgcacggaa atccatatcc gctacccaca tcggaataat attttttctg
    16501 ccaaataatt cttctgcccc atcccacttc tctgaattag ttccaatacg cggaatgact
    16561 tcatcaaatt gactcaaata tgtcacgctc cttctctttc attcgcctca attatagcat
    16621 aaattccacc ctaaaagctc accggagaag gatttagaat aattgttaaa gtttcgccta
    16681 agtgttataa tttataaaat attgtaaggt tgaaagtagg tggaatgagg atgagtacat
    16741 tcaaagtagg agatgtagtt tctgggaaag tcgcaggaat tcaaagctac ggagcatttg
    16801 tagcgctaga taattcgaca caaggcttag ttcatatttc agaaattacg catggttttg
    16861 tcaaagatat ccatgatttt ttagaagttg gccaagaagt caaagtcaaa attctggata
    16921 ttgacgaaga aaaaaataaa atcagtcttt ctattagagc gacagaggaa gcaccaaaag
    16981 aacaaccaac taaaaagaaa caagtttcat ctagcgaaaa cgacgaaggt tttaacactt
    17041 tacgcgataa actagaagaa tggattaaaa aagcagacaa ataaaagtcc caatcagctt
    17101 ggtaatatac ccattttggg ataaattgct aagctggtaa atttaattga ctaaaatttt
    17161 agaaaaaggg aatagttagt agtaattttc tatttattca atattataaa atagtcaaaa
    17221 gggggattta cgtgaaaaga tctattcatg tgcaggcatt tgtatataac gaaaagaaag
    17281 acgagatact agtggtgaga gatcgcaatt tgacatgggc atttccaggg ggacatgtgg
    17341 aaacaaacca aacaatggaa gaagcacttg caagcaaagt gaaagagcag acaaatatcg
    17401 atatagaaat agagtctatc ctacactgca aagagcgccg tgctacatgg gagcatgttt
    17461 gtacattcgt ttttcgagca aaacctgttg gtaatgcact tcttgcttcc aatgatgaca
    17521 atgtgtttcg agtgaagtgg atacctatcc cgctcgcaga tgatttatta gctgtagacc
    17581 aattatcatt aaatgaacta gtaagaagcg aaggcgtctt gtatgaaaac tatacctaaa
    17641 tttcaaaaag gctcaaattt cacaaggtca agccttgcta aaaagcactg attgatataa
    17701 agttaataaa gaaacttttt taaaatttgg agggaaaaca atgacacata ttaaatttga
    17761 ttattccaaa gcgctccgtt tttttgaaga acgcgaactt gattatcttg aaccagcagt
    17821 aaaagcagct catgattcat tacataatgg tacaggtgct ggtaatgatg cacttggttg
    17881 gattaactta ccaacagatt acgacaaaga agaatttgct cgtatcaaaa aagcaacaga
    17941 aaaaatccac agcgactccg acgtattaat cgttatcggt atcggtggtt cttatcttgg
    18001 ggcacgtgct gcaatcgaaa ctttaaatca ttccttctat aatgtacttg aaaaaggtgc
    18061 tcgtaaaaca cctcaagtat tctttgcagg aaatagcatt agttcctctt acttacatga
    18121 cttaattgaa gtagttggcg accgtgactt ctctgttaac gttatttcta aatccggaac
    18181 aacaacagag ccagcaatcg ctttccgtgt tttcaaagaa cttttaatca aaaaatatgg
    18241 cgaagaaggc gcgaaaaaac gcatttacgc tacaactgat aaagcaaaag gcgctctaaa
    18301 aacattagct gacaatgaag gctacgaaac atttgttgtt ccagatgacg ttggcggacg
    18361 tttctctgtt ttaactgcag taggtttact tccaatcgca gttagtggcg ttgatatcga
    18421 tgctcttatg aacggagcag cagcagcaag caaagatttc gacaaacctg aactaaaaaa
    18481 taacattgca taccaatacg cagcagctcg taatgttctt tatcgtaaag gcaaagtaac
    18541 agaacttcta atcagctatg agccaggctt gcaatacttt aacgagtggt ggaaacaatt
    18601 attcggcgaa agtgaaggta aagacaaaaa aggtatttac ccatccagcg cgaacttctc
    18661 cactgacttg cactctatcg gccaatatat ccaagacgga cgtcgcaacc tttttgaaac
    18721 agttatcaaa gtggataaac cacgccacaa cttaactatc aataaagaag acgtagattt
    18781 agatggctta aattatcttg caggcgaaac agttgatttc gttaatacaa aagcattcga
    18841 aggaactctt ctagcacata cagacggcga agttccaaac tttgttgtag aagttccaga
    18901 actagatgca tacactttcg gttacctagt atacttcttt gaaaaagcag tagctatcag
    18961 cggttaccta aatggcgtaa atccatttga ccaaccaggc gtagaagcat acaaagccaa
    19021 catgttcgca ttacttggca aaccaggctt cgaagacaaa aaagcagaat tagaaaaacg
    19081 cttaaacgat taattttcac ttccaaacct tggggccaat tgctccaagg ttttttgttt
    19141 gtttgcgatt ttcttccatt ggagttacca tatagttaaa caaaaggagg ggaagaagtg
    19201 ctatctatcg aacgaaaacg cgccatcgtc caatatgtca aaagccgaaa aatagcaact
    19261 gttagcgaat tagctaaaca ttttgaagtc cacgaagcaa ccattcgccg cgatttaacc
    19321 tctttagaaa aagacaaaaa gctaaaaaga acccacggcg gagttatgat agaagaaaaa
    19381 gtagtttccg aaccaaattg gaaaaaacga agcgaagtgc gctatgaaga aaaacaacgc
    19441 atcgccacgt tagcagcgac aatggtcaaa gacggcgata caatcattct tgacgccgga
    19501 acaacaaccg gacacatcgc aaccgcatta aaagaccgat ccaaactaac cgtcataaca
    19561 aacgatatca acgtagcttc cattatgcgc ttttccccgt ctaaagtaat tgtgacaggt
    19621 ggcgtcatct acccagaaac tttcatcctt aacggtatga ttacgagcgg aaccttgcag
    19681 agcattcacg tacataaagc atttgtaacc acaccggcac tcgatatcga caaaggctta
    19741 atgcactacg acgaatacct aatcccagct aagcaacaaa tgctccactc agccgatgaa
    19801 gtcatcttag taacagacca caccaagttt ggccgcattt cactttacaa atacgcagcc
    19861 ctagacgaaa tctcttctat tatcactgga aaagaaatag acccagtatt aaaagaacaa
    19921 tttgaagaaa aaggaatgca aatttataca acataatgtt ttaaaaactc catttaatca
    19981 ccaatttatg caccaaattc atcttttttc atctttattt aaaaaacttt gtaaaaagta
    20041 ttgacgaaag gcaaaaatct tggtatattt ataaacgttg ctgatgcgga caaaacgctt
    20101 tcgcaacaaa agaaa
//
LOCUS       DASDYO010000046        19992 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.046, whole genome shotgun sequence.
ACCESSION   DASDYO010000046 DASDYO010000000
VERSION     DASDYO010000046.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 19992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19992
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.046"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            49..639
                     /locus_tag="U0290_001370"
     CDS             49..639
                     /locus_tag="U0290_001370"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464127.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1700 domain-containing protein"
                     /protein_id="HEM2301415.1"
                     /translation="MNKQDFLNELNQRLELLDPKERRELLSDYQEHFRNGIEAGKSEE
                     QIVFDLGKPEEIAADIISERGIREEPAEMDYYYVPRKNQNENRSVSKQILIGVGLFFL
                     DICLIIPIMVSLWSLVISLWATVGGFLLSPVILGVGIIFGADFEFYQMFVSIGLVGLG
                     LMLLFVANALTQLTSKVTMAIIQWHKYAVKGGGKNA"
     gene            632..1732
                     /locus_tag="U0290_001371"
     CDS             632..1732
                     /locus_tag="U0290_001371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464128.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4097 domain-containing protein"
                     /protein_id="HEM2301416.1"
                     /translation="MRKHHLSKKLFFAGLVLFIIGAIGVALTMNKGNMIEKGEPLTKQ
                     WDLSAENINSIAFSSERDVTFEWKESTNGKNYIELKGNYSANDKKAIQKLDPVSEDGT
                     SFNITVPEEEDWYNGFGKIYAYGQQKVTVYLTKDTKLADLEVKSHSGDINVADFKVKK
                     FVSSTNSGELKVSNLEANTAQMATSSGDLELSNMKANSSVETGSGQTDLTNLTGDLEV
                     NGGSGDVNVTGVKAKKLKIAIDSGDIELTSGTVTDLAVLTTSSGDIDASTKGKVQAES
                     NSGAIELAGITNDVTAKTSSGDIDVAFIKQVKNIEINTDSGEVELDLPGDFKAIYEAS
                     SNSGSVKAPTSDSNTDNRVTVKTSSGDIKIEK"
     gene            1838..2338
                     /locus_tag="U0290_001372"
     CDS             1838..2338
                     /locus_tag="U0290_001372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464129.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301417.1"
                     /translation="MNFHIRKATNSDAEAIQHVAITSWHHTYQDLIPGDVQDDFLERF
                     YNVETLHNRISATPFAVVEQADKVIGFANFIELEKGKSELAAFYLLPEVTQRGLGTEL
                     LEVGMTLFHVPLPMFVNVEKGNETAIHFYKAKGFVQVEEFTEDFYGYPLETIRFNLNH
                     HAFEEE"
     gene            complement(2386..2772)
                     /locus_tag="U0290_001373"
     CDS             complement(2386..2772)
                     /locus_tag="U0290_001373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464130.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301418.1"
                     /translation="MRFIIAYLSIFVLGIFSTLLVETILYDNVTPQLVFSAILFAAPV
                     ILVASTLGEIFYGFSKKASYFTFAIWGFAYGVVAAVIILSIIQVSGMLISVGVSILAG
                     VIMALLAIIFFFLRGGKSTSGKAATK"
     gene            complement(2825..3169)
                     /locus_tag="U0290_001374"
     CDS             complement(2825..3169)
                     /locus_tag="U0290_001374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464131.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HEM2301419.1"
                     /translation="MLDKKIISALSYFSLFFAPVITPAIIWCTTKDKEIRHHVRWALL
                     TQTTFVAGVVVMILLYNNVPFSTNSADTINFLALATVFFIVFLNVSILIFNLIRGITR
                     IVKHSDDNWARC"
     gene            complement(3318..4658)
                     /locus_tag="U0290_001375"
     CDS             complement(3318..4658)
                     /locus_tag="U0290_001375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464132.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM2301420.1"
                     /translation="MSSVHKVASISLFTLAWPIFLEQFLRLMISYIDVFMLGHYSDDA
                     VAATGVANQILVISIIIYGFISVGVQIIVAQMIGAKKHKEIENVITNGLVVAFLIGIV
                     MSIIFIFMSKNFLTWMGIDPHLVQVGAPFLEIIGGSSVVIAIHASILPILRAHGYVRQ
                     SILVPVTISIINVVGNYLFLYGPLAYLDYGVAGVGISTAVANFVGMGLAIWMLRKYIG
                     YTFHFKKLEQVSKKLLYSILRLGLPSAGENLSYAGSQLVVTAIIAILGTEALTTKVYA
                     STVSQFVALFAIALGQASQIIIGRAVGAKEIDKAYKQGLRSWKIGLVVAIVVSVSIYL
                     FAEPIMSLFTTNTEIIAMTKELFLLSIFLELGRATNIIIISSLNSTGDVRFPFICGLI
                     VMWIVSLPFSYVLGISAGLGLVGVWLAYIIDEGVRAVLMYRRWRSKVWSLKSVI"
     gene            4824..5285
                     /locus_tag="U0290_001376"
     CDS             4824..5285
                     /locus_tag="U0290_001376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464133.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2301421.1"
                     /translation="MSSKNQDLGHSVIKAFMNFKHAEIKSFQIPGYSKSETRFIFILS
                     RGLKSRGPKIRVSDLGHMLRISKPSVTQMIQSLEGKGLIKRVQNPEDKRSMYVELTEV
                     GAGVSEKMLDEFQASFEDMQEFLGEDDMKKLITLLEKLTDYLNTKSENKEA"
     gene            5293..7017
                     /locus_tag="U0290_001377"
     CDS             5293..7017
                     /locus_tag="U0290_001377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003735787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301422.1"
                     /translation="MMKLMKRLKPYWLSITAVLVLTFGQVIGQLYLPTLMSNIIDKGV
                     VTGDTDYIWSTGMQMLLISFASVILSVIVVYLASRISMGFGKDLRDKIFTKVEDFSLQ
                     EFDKVGTSSLITRTTNDVVQIQNVLYMMMRLMVMAPIMLLGGIIMAVGRDAKLSLIFV
                     VVLPLLLLLVVILGGKAMPMFKSLQKKMDKLNRVIREGLTGIRVVRSFNRNEDELEKF
                     EEANADYATTAIKVNRLLSLMSPLMMLLMNLTSIAIVWIGSIFIGNGDMQVGDLMAFI
                     QYAMQIMMSFMMLSAVFIMIPRAGASAERINEVLDMNAEILNPENPKTSAPPAKLSFE
                     HVTFRYEGAEKPVIEDITFEANAGETVAIIGSTGAGKSTLINMIPRFYDVESGVVKIN
                     GIDVREMDQSSLRQKIGLVPQKAVLFTGTIASNMRYGKEDATDEEIWAALRTAQAENF
                     VSKLANGLGSRVEQGGNNFSGGQKQRLSIARSLIRKPEIYIFDDSFSALDFKTDAKLR
                     EALKAETTEAVTLIVAQRITSVVNSDQIIVMNEGKIAGIGTHEELKETNQIYQEIMRS
                     QLSEEEIA"
     gene            7014..8831
                     /locus_tag="U0290_001378"
     CDS             7014..8831
                     /locus_tag="U0290_001378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464135.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301423.1"
                     /translation="MSGPGPGGGMRMQTTAKPKNFKQTLFRLLGYMKPRSVAIIVVFI
                     FAILSTIFNIFSPKELGKATTEIFKGVMSPAGIDNDKIFNILMIVLVLYLGSSLFSFI
                     QQYVMSSVAQRTVYDMRKDLKAKMARLPLKYYDTRSNGDILSRSVNDMDNIANTLQQS
                     LTQAITAIVQMIGVLIMMLTISWQMTLIVLVTVPISIILVAIIAGRSQRYFGAQQRNL
                     GILNDTVEETYGGQTIIKAFGQEKKTLVKFDEVNEDYFKAAKKAQFISGIMMPVMQFV
                     GNLGYVGVCVAGGIFVTNGTLQVGDIQSFTQYVQLFTQPISSVANIANIIQSTIASAE
                     RVFEMMDEEEEKDEIPANVNQVAGEEHSIVFDHVKFGYTPDKPLMTDLNIHVEEGQMV
                     AIVGPTGAGKTTIINLLMRFYDVDGGQIRMKGIDTRDMTKDAVREKFGMVLQDTWLFN
                     GTIADNIAYGREGATKEEVIGAAKAAYADDFIRRLPNGYDTVLNEEGSNISQGQKQLL
                     TIARAILSDPSILILDEATSSVDTRTELNIQLAMGNLMEGRTSFVIAHRLSTIRDADL
                     ILVMNHGSVIEQGTHQELLDAKGFYADLYNSQFTGAQAV"
     gene            8948..9247
                     /locus_tag="U0290_001379"
     CDS             8948..9247
                     /locus_tag="U0290_001379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-like domain-containing protein"
                     /protein_id="HEM2301424.1"
                     /translation="MYQSITANDLEQDLKKASHNILDVRDADAFVEGHIPDAINIPIN
                     ELPEKLASLDKEKPYTIICYAGGRSERASQFLAAEGFDVTNVMGGMGAFHGIVTK"
     gene            complement(9290..11059)
                     /locus_tag="U0290_001380"
     CDS             complement(9290..11059)
                     /locus_tag="U0290_001380"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464137.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2301425.1"
                     /translation="MRKMGVKIGLCVLLMMPFTISFSANVSAEEEISVKAAQDVVNIP
                     DPVLKSYLNGLLGQSSTSDITEAQMDTITNVTISNSSLTDLTGLDYAHNLTILHLSNT
                     GVTDYALVAKIPSLTNLSIAGDNLTNDSLPDLNNLSNITNLNLSPGKLDNNALTKFNK
                     MSKLSYLNLDSNPSITNIMPLKSIPNLATLFVQFCGINDFRGIDTFPKLVSLSAYGQN
                     VGRTVLINSSIKSSALNFDEANQTIFVPFTLMTERGVNFDGYLFPFTTNTSSASTYFT
                     LNETKIDGSRLTIDDKGITVSGITKSYFDTITKMEYNALYNNPAGSYQTPPNFNNYSV
                     SGGSYDHYFDIDHTLTITNDSAISYGEQTTVTEEQFLKDVHAETDDGTPVTSDFNTVV
                     DFSKPGVYTVTLNAENAAGLKATPTQVTVTILAKPVITADKSISYTKDSTKTDQQFLQ
                     DISAKTSDGSKVTSDFDSVVDLAKVGTYKVTLNAVSADGLNADPVIVLVNVVEGNEPP
                     TPPAPGPDPTPGPTPNPNNPNINPNPDNGQSANSENASNPSNSEVNAALPNTGDASQA
                     TTVLIGIIIAGVAILFFRQRKHS"
     gene            complement(11220..11846)
                     /locus_tag="U0290_001381"
     CDS             complement(11220..11846)
                     /locus_tag="U0290_001381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464138.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HEM2301426.1"
                     /translation="MTNVLFIKANGLPAERSVSVALYEIFLTEYKKSHPDDNVTELDL
                     FEADLPYYDVTMMSGLHKEAAGETLSPEEKRLADIANSYLDQFLAADKIVMAFPLWNF
                     SIPAQFLTYLFYLNQAGKTFKYTANGPVGLVADKKIALLNARGGIYSDGPMQSFEMSL
                     SYVKNVLAHFGISEPEMVIVEGHNAKPDQAKDIISAGAKEAVELAKIF"
     gene            12015..12464
                     /locus_tag="U0290_001382"
     CDS             12015..12464
                     /locus_tag="U0290_001382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464139.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2301427.1"
                     /translation="MGVKTLKPCTERSELLYRMHLLSKEISHVFEQQTNMSFTKVEIL
                     FHIQQTPGQSQNRLREKLYIDSASITRHLKRMEAQGLIVRKKQDENKRYTYLFLTSAG
                     EAELATLLLEKEKFQNGALEAFSEEEVSALLKSVTKMMNNVEKMEEK"
     gene            12467..13408
                     /locus_tag="U0290_001383"
     CDS             12467..13408
                     /locus_tag="U0290_001383"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464140.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent oxidoreductase"
                     /protein_id="HEM2301428.1"
                     /translation="MKAVVIENYGGKEELKEKEVAMPKAGKNQVIVKEAATSINPIDW
                     KLREGYLKQMMDWEFPIILGWDVAGVISEVGEGVTDWKVGDEVFARPETTRFGTYAEY
                     TAVDDHLLAPLPEGISFDEAASIPLAGLTAWQALFDHAKLQKGEKVLIHAGAGGVGTL
                     AIQLAKHAGAEVITTASAKNHELLKSLGADQVIDYKEVNFKDVLSDIDVVFDTMGGQI
                     ETDSYDVLKEGTGRLVSIVGISNEERAKEKNVTATGIWLQPNGEQLKELGKLLANKTV
                     KPIVGATFPFSEKGVFDAHALSETHHAVGKIVISFNK"
     gene            13503..14036
                     /locus_tag="U0290_001384"
     CDS             13503..14036
                     /locus_tag="U0290_001384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301429.1"
                     /translation="MEIRELKNGQIIMIREATKEDSSNIITYLNEVAGETDYLSFGQG
                     EFAFSIAEEAEYIEENDKNPGSVMLLCFIDDELASISQLMGHMKKRELHTSELAISIR
                     KKYWGLGIGTICMGELIKYAKSSEYLKLIYLEAVSENKRAINLYKKFGFIEAGEIPAL
                     MQVDSRYLDVTMMYLVI"
     gene            complement(14033..14275)
                     /locus_tag="U0290_001385"
     CDS             complement(14033..14275)
                     /locus_tag="U0290_001385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464142.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301430.1"
                     /translation="MHPIEQLLANNNTTTTDVESNTRLKEGSLQKIIDKDIRTSDISL
                     RILSQIAIFLNTGADIIAKQLSDIEVVNDLVFLIED"
     gene            14382..16133
                     /locus_tag="U0290_001386"
     CDS             14382..16133
                     /locus_tag="U0290_001386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464143.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEM2301431.1"
                     /translation="MNDLKDIFKVLYQFKTDYLKVTLLLTILQAFVMGPFIYYFFFFI
                     LRVIGVPGITDANLGEVFSSPVAVIMLLILALLILLFIYYELGFFIMMAIYQLRGESY
                     TVFKIIQRLNVKAKYFLSYQAIYFLLYFFLLLPIAGLSLPITITENLYLPHFITDELM
                     KTTTGTWLYVIAIAIIFYISARLVFALPYFIEDKSLKISGAIRKSWKYPQKNLFFMLL
                     KWVLIIVAIGFLVSIIATIMMLPLLLIEKITPGIAVFIAGITLTILQVIGFFAAGIFQ
                     GIIAQLLVKNAFAIEGQPALVTRNQFPHKKRFIIVAIIVFIIFSSFNIYTVNATLYEP
                     NTKIIAHRGDTMNAVENTVEAIESAAEAGADYSEIDIQETKDHQFVVFHDMTLRRLAG
                     SSKRVADMTLNELQQTKVKSGDYSSHIASFDEIIKTAKRNKIDLLVEVKLHGGESSDM
                     VERLVTLLKKEKVTDKYLVQSLDQPVIEKIEQADPTLETGIILALNIGNLPKTSADFI
                     VLEDFSINKRLLTQARQNNKRVFVWTVNKEKLMQMYLRKNVDGIITNYPKKAIELRES
                     FNENDSLRSRIENRLGF"
     gene            complement(16172..16666)
                     /locus_tag="U0290_001387"
     CDS             complement(16172..16666)
                     /locus_tag="U0290_001387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464144.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5067 domain-containing protein"
                     /protein_id="HEM2301432.1"
                     /translation="MKKLKSVLLLMGIVTFALALTACGGTEDKASTEKTETAKADTKK
                     KANPNELGDYKVEILSSEVVKDFEGNNAIAIKTKFTNNSKENISFMVAIDQQAFQNGT
                     QLETTVSADASMGGSEKDVQPGGTLEVTELYKLQDTQNKVDVEAKELISFSKNAVKKS
                     FELK"
     gene            complement(16746..17888)
                     /locus_tag="U0290_001388"
     CDS             complement(16746..17888)
                     /locus_tag="U0290_001388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464145.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein kinase"
                     /protein_id="HEM2301433.1"
                     /translation="MGEMTLAFIEEQYKELDNLNNKENPAVLTRNTSTGELFVRKIIP
                     SSFAPVIEQLKDLSSKYLPKIEVMIPNGNQLIVYEEYINGKNLADLMKANATFDADEV
                     TRLMLMLSDALTELHANAIIHRDIKPSNIMISSDGVLKLIDFDASRVFEVGKNQDTVN
                     LGTIGYAAPEQYGYSQTDVRSDIYSIGVLMLELLLGKNTLPDKEHATSLEKIAMQAAA
                     FDPEQRYQSIQDFRTAVKNDSLGPSYVSELSDFTELDNFSTESDWENVSADYEKDFVP
                     WYKHIPGFRTGTPWKMIVGVLGYIFLLFGLFTPPTEGVKMSPIVNFFNNFFLIVPAFV
                     IFTNLCGIWSKLPLLKSSSPGTRKAGIVIYIIVCVSIYGIYNEIFS"
     gene            17995..18450
                     /locus_tag="U0290_001389"
     CDS             17995..18450
                     /locus_tag="U0290_001389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464146.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301434.1"
                     /translation="MDGEKETSKLLHELKKATNLRQVLDENEAEFKSSEMVTYLKELL
                     AEKKLTKASVIRAARLHETYGYQIFSGVRRPSRDRTIALSFGFKLTGLEASRLLKYTE
                     YPPLYAKNRRDAIIIFALDHGYTLDQTNDSLYDLEEALIETYKEEKPLI"
     gene            18506..18898
                     /locus_tag="U0290_001390"
     CDS             18506..18898
                     /locus_tag="U0290_001390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464147.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1398 family protein"
                     /protein_id="HEM2301435.1"
                     /translation="MINEQTILQAATSEKNAGDFPKVVQSFKELGVTKYQFLVEKGIY
                     VFWDEMDNQVESKLNGVSMPISEEISRDRLKDAIKQAQAGKIDFEIFIKLAGLAGVRL
                     WEADLSAMKVTYIDNTGNDLIVEPIPSI"
     gene            18995..19735
                     /locus_tag="U0290_001391"
     CDS             18995..19735
                     /locus_tag="U0290_001391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464148.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sulfite exporter TauE/SafE family protein"
                     /protein_id="HEM2301436.1"
                     /translation="MDIITYFLIALSTSVVGSFLGIGGGVILLPILLLMGVSQGTAAF
                     SSALTVFTMAIFTCSIYYKRKQGNVGLALKIAVTSIPTTFLGAMVNQMLPEAVYRFLY
                     GALIVVLLGIMIWKKKRHNEKPHFLSEYRIIPYVFGVIIGFLAGLFGIGGGPIVIPIL
                     LLIFMLNQKTASATSSYVTLLTSLASIGSYAIIGGSDFSIGIYMIPGAIIGALIGTRL
                     NKLLDEKWIAILFNVLLIALFALNLIKI"
     gene            19821..>19992
                     /locus_tag="U0290_001392"
     CDS             19821..>19992
                     /locus_tag="U0290_001392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301437.1"
                     /translation="MKKSWPDFAAFLLTILTVTWIILTWGLHISDIVPGGEKGVWYKL
                     IPLFLGIISTISV"
BASE COUNT         6530 a         3351 c         4040 g         6071 t
ORIGIN      
        1 attttacaga cagtgtggca aagctattaa cagaggggga tgcagtaaat gaataaacaa
       61 gattttctca atgaattaaa ccaacgactg gaattgcttg atccgaaaga acggagagag
      121 ttactatcgg actatcagga gcattttaga aatgggattg aagcagggaa aagcgaggag
      181 caaatcgttt ttgaccttgg caagccagaa gaaattgccg cggatataat cagcgaacgt
      241 ggtattcgtg aagaaccggc agaaatggat tattattatg tcccgcgaaa aaatcaaaat
      301 gaaaatagat ctgtgagtaa acaaatttta ataggtgtcg gattattttt cttagatatt
      361 tgtcttatca ttccaattat ggtttcgcta tggtccttgg ttatctcact ttgggcgacg
      421 gttggtgggt tccttttatc accagttata cttggcgtag gaattatttt tggtgctgat
      481 ttcgaatttt atcaaatgtt tgtttctatt ggccttgtag gtttggggct aatgctttta
      541 tttgtagcaa acgcgctaac tcagcttaca agtaaagtaa caatggcgat tatccagtgg
      601 cataaatatg cggtaaaggg aggcggaaaa aatgcgtaaa catcacttaa gtaaaaaatt
      661 atttttcgct ggtttggtac tatttattat cggtgctatc ggtgtagcat taacgatgaa
      721 caaaggtaat atgatagaaa aaggtgaacc acttacaaaa cagtgggact tatcagctga
      781 aaatattaac tccattgctt tttcttccga gcgcgacgta acgtttgaat ggaaagaaag
      841 tacaaatgga aaaaattaca tcgaactaaa aggtaattac tctgctaatg ataaaaaagc
      901 cattcaaaaa ttagatccag tttcggaaga tggaacgtcc tttaatatta cagttcctga
      961 agaagaggat tggtataacg gctttggcaa aatatacgca tacggtcaac aaaaagtaac
     1021 cgtttattta acaaaagata ctaaattagc tgatctagaa gtgaaatctc attctgggga
     1081 tatcaatgta gctgatttta aagtaaagaa atttgttagt tctaccaact caggtgagtt
     1141 aaaagtaagt aatttggaag caaatactgc tcaaatggct acttcttctg gggacttgga
     1201 attatcgaat atgaaagcaa atagctcagt tgaaactggt tctggacaga cggaccttac
     1261 taatttaaca ggtgatttag aagtaaatgg tggttcaggc gatgtgaatg ttacaggtgt
     1321 taaagcgaag aaacttaaaa ttgccatcga ttcaggagac attgagttga ctagtggcac
     1381 tgtaactgac ctagctgtgt taacaacaag ttccggagac attgatgcaa gtacaaaagg
     1441 taaagtacaa gcggaatcca actcaggagc aatcgaactt gcaggcataa cgaatgatgt
     1501 aacagcaaaa acaagctcag gtgatatcga tgtagctttt atcaaacaag taaaaaacat
     1561 cgaaatcaat acagattctg gtgaagttga acttgatcta ccgggtgatt ttaaagctat
     1621 ttatgaagca agtagtaatt caggtagcgt taaagcacca acgagtgatt caaataccga
     1681 taaccgagta acggtgaaaa caagttccgg agatattaaa atcgaaaaat aaaaaatcag
     1741 tgcgctaatt atttaattag cgcattcttt ttgttaaaaa ggggtaaagt cagataaact
     1801 gtttcatcaa tttgcgcaag tgaaagggga atggatgatg aattttcata ttaggaaagc
     1861 aactaattcg gatgctgaag ccattcagca tgtagcgatt acttcgtggc atcataccta
     1921 tcaagattta attccaggcg atgtacaaga cgattttttg gaaaggtttt ataacgttga
     1981 gacgcttcat aatcgtattt cagcgactcc ttttgctgtt gtggaacaag cagacaaagt
     2041 aatcggattt gcgaatttta ttgaacttga aaaggggaag agcgaactcg cagcatttta
     2101 tttactacca gaagtgacac aacgcggact tggtacagaa cttttagaag taggaatgac
     2161 tctatttcac gtgccattac caatgttcgt taacgtcgaa aaaggaaacg aaacagcgat
     2221 tcatttttat aaggcgaaag ggtttgttca agtggaggaa tttaccgagg atttttacgg
     2281 ttatccgctg gagacaattc gttttaattt gaatcatcat gcgtttgaag aagaataaaa
     2341 aaatgtctat tctagttgaa tgaatcaatt aggatagaca tttttttatt tcgtagcggc
     2401 ttttccactg gtagattttc caccgcgtaa aaagaagaag atgatggcaa gtagcgccat
     2461 gataactcct gcgagaatgg atacgccaac agaaatgagc ataccagaaa cttggataat
     2521 acttaaaatg atgactgctg caacaacccc gtaagcgaag ccccatatag caaatgtgaa
     2581 gtaactagct tttttgctaa acccgtaaaa aatttcgcct aacgtagaag caactaaaat
     2641 tacaggagct gcaaaaagta tcgctgaaaa cacaagctgt ggcgtaacgt tgtcatagag
     2701 gattgtttcg actaaaagcg tagaaaaaat tcctaaaaca aaaatcgata aataagcaat
     2761 aataaaacgc atcaaaaaaa cctcctaaag tacactatat tatagcataa attaggaagt
     2821 tagcttaaca tctagcccaa ttatcgtcac tatgctttac gatacgtgta attccccgaa
     2881 tcaagttgaa aatgagtatc gatacattta gaaaaacgat aaaaaataca gtagctaagg
     2941 caagaaagtt aatggtatct gcactattgg tactaaatgg aacattgttg taaagtaaaa
     3001 tcattacaac tacaccagcg acaaaagttg tctgtgtgag gagtgcccat cttacatgat
     3061 gccgaatttc tttatctttt gttgtacacc agataatcgc gggagtaatg accggggcaa
     3121 agaaaagact gaaataacta agcgcactaa taattttttt atctaacatt tctcatctat
     3181 cctctcattt gtttataagt ctagtatagc ggggaaagag aaatggaacc atcgaattag
     3241 gtgacgatat acagaggaag atgacagttt tgtcatatac aaaaacgcct cttcgaaaaa
     3301 atcaaagaga cgtttcttta tatgactgat tttagggacc aaactttact gcgccatctt
     3361 cggtacatta gaacagctcg aacgccttca tcaataatat aggcgagcca aacccctaca
     3421 agcccaagac cagcagagat accaagtaca taggagaacg gcaaactaac aatccacata
     3481 acgataagtc cgcatataaa tggaaaacga acatcgcctg ttgagttaag actgctaata
     3541 atgataatat tcgtcgcacg tccaagttct aggaaaatcg aaagtaagaa caattctttc
     3601 gtcatcgcaa tgatttcggt attggtagta aataaactca taattggttc cgcgaaaagg
     3661 taaatcgaaa cgctgaccac aattgcgaca accaaaccaa tcttccaact acgtagacct
     3721 tgcttataag ctttatcgat ttcttttgca ccaaccgcgc gaccgataat aatttgagag
     3781 gcctgaccga gcgcgatagc aaagagtgcg acaaactggc taaccgtcga agcataaact
     3841 tttgtggtaa gcgcctctgt accaagaatc gcaataattg cggtaacaac tagttgcgag
     3901 ccggcatacg ataaattttc cccagcagag ggaaggccaa gtcgtaaaat cgaataaagt
     3961 aattttttgg aaacttgctc cagttttttg aaatggaaag tatagccgat atattttcgc
     4021 agcatccaga tggctagacc cattccgacg aagtttgcga cagcagtgga aataccaaca
     4081 cctgctaccc cgtaatctaa gtatgcaagc gggccgtaca ggaataagta attaccgaca
     4141 acattgataa tgctaatcgt cacaggaaca agaatggatt gtcttacgta accatgcgcc
     4201 cggagaatag gcaaaatcga agcatgaata gcgataacaa ccgagcttcc accgataatt
     4261 tctaaaaacg gtgcaccaac ttgaactaaa tgaggatcaa ttcccatcca agtcaggaag
     4321 tttttcgaca taaaaatgaa aataatactc atcacaattc caattaagaa agcgaccact
     4381 aagccatttg taatcacatt ttcaatttct ttatgttttt tggcaccaat catttgggca
     4441 acgataatct gtacgccaac actgataaag ccgtaaataa taatagaaat aacaagaatc
     4501 tgatttgcta cccctgtcgc agctaccgca tcatctgaat aatgccccaa cataaagaca
     4561 tcaatataac taatcatcag acgtaaaaat tgctctagaa aaatcggcca agcaagcgta
     4621 aaaagactta tgctggcgac tttatgtact gaactcactt atttccctcc cttcgcatta
     4681 acacaattaa agccattata aggtaattaa agttaaaagt atagattaat ttcaaaatcg
     4741 ctccaagata tcgcttgaca aaaatcgaat atctcatata attagttagg taaactaatc
     4801 aaatgatgga aagaagtgga gaaatgtctt cgaaaaatca agacttgggg cactcagtaa
     4861 tcaaggcttt catgaatttt aagcatgctg aaataaagag tttccaaatt cccggttaca
     4921 gtaaatctga aacaagattt atttttattt tatctcgtgg gcttaaaagc agagggccaa
     4981 aaattcgtgt ttccgatctt ggtcacatgc ttagaatttc aaaaccaagc gtcacgcaaa
     5041 tgattcaatc tttggaagga aaaggactca ttaaacgtgt tcaaaaccca gaagataagc
     5101 gctcgatgta tgtggaatta acagaggtcg gagcaggcgt gtcagaaaaa atgctcgatg
     5161 aatttcaagc tagttttgaa gatatgcagg agtttttagg cgaagacgat atgaaaaaat
     5221 tgattacact cctagaaaaa ctgacagatt acttaaacac aaaatccgaa aataaggagg
     5281 cataaaccgc aaatgatgaa attgatgaaa agattaaaac cttattggct gagcattacg
     5341 gccgtattag tccttacttt cgggcaagtc attggacagc tttatttacc gacgcttatg
     5401 tcgaacatta tcgacaaagg agttgtaaca ggcgatacag actacatttg gagcactgga
     5461 atgcaaatgt tacttatatc atttgcttca gttattttgt cggtcatcgt cgtttatctc
     5521 gcatccagaa tttcgatggg attcgggaaa gatttacgcg ataaaatttt tacaaaggta
     5581 gaggactttt ccttacaaga atttgataaa gtaggaactt cttccttgat tactagaacg
     5641 acaaatgacg ttgttcaaat ccaaaatgta ctttatatga tgatgcgatt aatggtgatg
     5701 gcgccaatta tgttgctcgg cggtattatt atggcagttg gcagggacgc gaaattatcg
     5761 cttatttttg tcgttgtttt accgctacta cttctattag tagttattct tggcggaaaa
     5821 gcaatgccga tgtttaaatc acttcaaaag aaaatggaca aattaaaccg cgttattcgt
     5881 gaagggttaa ccgggattcg tgttgtgcgt tcctttaacc gcaatgaaga tgaactcgaa
     5941 aaatttgaag aagcaaacgc tgactatgct actacggcga ttaaagttaa ccgactgcta
     6001 tctcttatga gtccattaat gatgctactg atgaacttaa cttccattgc gattgtctgg
     6061 attggttcga tttttattgg caatggtgat atgcaagtag gggacttgat ggcgtttatt
     6121 caatacgcga tgcaaattat gatgtccttc atgatgcttt ctgctgtatt tattatgatt
     6181 ccacgtgccg gagcttctgc tgagcgtatt aatgaagttt tagatatgaa tgcagaaata
     6241 cttaaccctg aaaatccaaa aacaagtgca ccaccagcaa aactttcttt tgaacatgtt
     6301 actttccgct atgaaggcgc tgaaaaacca gtaattgaag atattacttt tgaagctaat
     6361 gctggggaaa cagttgcaat catcggaagt accggtgctg gtaagtctac tttgattaat
     6421 atgattccac gtttttatga tgtcgaaagt ggtgttgtaa aaattaatgg aattgacgtg
     6481 cgtgaaatgg atcaatccag tttgcgccaa aaaattggtc ttgtgccgca aaaagcggtt
     6541 ctattcacag gaacaattgc ttctaatatg cgctacggaa aagaagatgc aaccgacgaa
     6601 gaaatttggg cagcacttcg aacagctcaa gcggaaaact ttgtatctaa acttgcaaat
     6661 ggtttaggaa gccgcgtaga acaaggcggg aacaacttct ctggaggaca aaaacaacgt
     6721 ctttccatcg cacgttcttt aattagaaaa ccagaaattt atatttttga tgatagtttc
     6781 tcggcgctcg atttcaaaac ggatgcgaaa ctgcgtgagg ctttgaaagc tgaaacaacc
     6841 gaagccgtga ctctcattgt ggcacaacgt attacctctg ttgtcaattc cgaccaaatc
     6901 attgttatga atgaaggtaa aattgctgga attggaacac atgaagaatt gaaagaaacg
     6961 aatcaaattt atcaagaaat tatgaggtca cagctgtcag aggaggaaat cgcatgagtg
     7021 gtccaggtcc aggtggtggc atgagaatgc aaacgaccgc caaaccaaag aactttaaac
     7081 aaacactatt ccggcttctt ggctatatga aacctcgttc tgtcgcaatc atcgtcgtgt
     7141 ttatctttgc gattttatcc acgattttta acatttttag cccgaaagaa ctcgggaaag
     7201 caacaacgga aatttttaaa ggtgttatga gtccggctgg gattgataac gataagattt
     7261 tcaatatatt aatgattgtt ttagtcttat accttggtag ttccttattt agtttcattc
     7321 agcaatacgt catgtcgagt gttgcgcaac gaactgttta tgatatgcgg aaagatttaa
     7381 aggcgaaaat ggctcgcttg ccgctgaaat attatgatac acgctcaaat ggtgatattc
     7441 taagtcgttc tgttaatgat atggataata tcgcaaacac tttgcaacaa tcactaaccc
     7501 aagctattac cgcgattgtc caaatgattg gtgttttaat catgatgcta acaataagct
     7561 ggcaaatgac attaatcgtt ctagtgacag ttccaatcag tattatttta gtcgccatta
     7621 ttgctggtag atcacaacgt tacttcggcg cacaacaacg taatctaggt attttaaatg
     7681 atactgtaga ggaaacttac ggtggccaaa cgattattaa agcctttggt caagaaaaga
     7741 aaacgttagt aaaatttgat gaagtaaatg aagattattt caaagcagcg aaaaaagcgc
     7801 aatttatttc cgggattatg atgccggtga tgcaatttgt tggtaactta ggctatgtcg
     7861 gtgtctgtgt ggccggtggt atttttgtta ctaatggaac gcttcaagtg ggggatattc
     7921 aatcatttac gcaatatgtt caattattta cgcaaccaat ttcaagtgtg gcaaatattg
     7981 ctaacatcat tcaatccact attgcttcgg cggaacgtgt atttgaaatg atggatgaag
     8041 aagaagaaaa agacgaaatt ccagctaacg ttaatcaagt tgctggcgaa gaacacagca
     8101 ttgtattcga ccacgtgaaa ttcggttaca ctccggataa acctctaatg actgacttaa
     8161 atattcatgt ggaagaaggc cagatggtag caattgttgg tccgactggt gctggtaaaa
     8221 caaccattat caacttgctg atgcgttttt atgatgtaga tggtgggcag atccggatga
     8281 aaggtattga tacacgcgat atgaccaaag atgctgtccg cgaaaaattc ggaatggtac
     8341 tgcaagatac ttggttattt aacggaacca ttgccgacaa tatcgcatac ggtcgtgaag
     8401 gcgcaacgaa agaggaagtc atcggagcag caaaagcagc ttatgcagat gatttcattc
     8461 gcagacttcc aaatggttat gataccgtct tgaatgaaga aggttctaac atttcgcaag
     8521 gtcaaaaaca attactaacg attgcccgtg cgattttatc tgatccatct atcttgattc
     8581 tagatgaagc gacttctagc gtagatactc gtacagaatt aaacattcaa cttgcgatgg
     8641 gtaatttgat ggaagggcgc acaagctttg tgattgcgca tagactttca actattcgtg
     8701 atgcagactt aattctcgtg atgaatcacg gtagtgtaat cgaacaaggt acgcaccaag
     8761 aactactgga cgcaaaaggc ttctacgctg acctttacaa cagtcagttc acaggagctc
     8821 aagccgttta aatgtaagaa gacaatgtgg ctcacccgcc gcattgtctt tttttgagca
     8881 aaaaatttgt ttgatggtgg attaggcgtt atggttaata aagaagaaat tgaagaggtg
     8941 aaaatagatg tatcaatcca ttactgcaaa tgatttagaa caagacttaa aaaaagcgtc
     9001 acataatatc ttagatgtca gagatgcaga tgcttttgtt gaaggacaca ttccggacgc
     9061 aataaatatt ccaattaatg aactaccaga aaaattagct tctcttgata aagagaaacc
     9121 ttatacaatt atctgttatg ctggaggtcg ttctgagcgc gcgagtcaat ttttagctgc
     9181 agaaggcttt gatgtaacga atgtaatggg aggtatggga gcctttcacg gtatagtaac
     9241 taaataaaaa aagaagtcgc gactaaaatt ctagtcacga cttttttatt tagctatgtt
     9301 ttctttgacg gaagaagagg atagctactc cggcaatgat aatcccaatt aacacagtag
     9361 ttgcttgact cgcgtcgcca gtgtttggta aagcggcatt tacttctgag ttagacggat
     9421 ttgatgcgtt ttcagagttc gcagattgtc cattatctgg gttgggattg atatttggat
     9481 tattaggatt tggcgtagga cctggtgtgg gatcagggcc gggagcaggt ggtgtcggag
     9541 gttcatttcc ctctaccaca tttactaaaa caataactgg gtcagcattt agtccatctg
     9601 cacttaccgc atttaaagtc actttatacg ttccgacttt ggctaaatca acaacgctat
     9661 caaaatcact cgttacctta ctaccatcac ttgtttttgc tgaaatatct tgtaaaaatt
     9721 gctggtctgt cttggttgaa tctttcgtgt aagaaatgct cttatctgct gttatgactg
     9781 gttttgcaag tatggtcacc gttacttgtg ttggcgttgc ttttaaacca gcagcatttt
     9841 cggcatttaa tgtcaccgtg tagacaccgg gtttactaaa gtctacaacc gtattaaaat
     9901 cactagtaac aggcgttcca tcatctgtct cagcatgaac atcttttaaa aattgttctt
     9961 ctgtaactgt ggtttgttcc ccataactta ttgctgaatc atttgtaatg gttagtgtat
    10021 gatcgatgtc aaaatagtgg tcgtagcttc cccctgatac ggaataatta ttgaaatttg
    10081 gcggagtttg atacgatccg gcggggttat tgtataatgc attgtattcc attttagtaa
    10141 tcgtatcaaa ataacttttg gtaattccac ttaccgtaat tcctttatcg tcaatggtta
    10201 aacggctacc gtcaattttg gtctcattta aagtgaaata cgtgctagca gaacttgtat
    10261 tagttgtaaa agggaacaaa tagccatcaa agtttactcc tcgttcagtc attaaagtaa
    10321 acggcacaaa gatagtttgg tttgcttcat caaaattcaa tgcagagctt ttgatagagc
    10381 tgttgattaa aacggttcta cctacgtttt gtccgtaagc cgataaactc actaatttag
    10441 gaaaagtatc aattccacgg aaatcattaa ttccacaaaa ctggacaaat aaagtagcta
    10501 aatttggaat ggattttagt ggcatgatgt tagtaataga aggattactg tctaaattta
    10561 agtaacttaa cttggacatt ttattaaatt tagttagtgc attattgtcg agcttaccag
    10621 gacttagatt taagttggtg atgtttgata aattattcaa atcgggtaat gaatcatttg
    10681 ttaagttatc tccggcaatg ctaagattag ttaggctagg tatttttgcg actaaggcat
    10741 aatctgttac ccctgtatta gacaaatgta aaattgttaa attatgtgca taatcaagac
    10801 ctgttaaatc agttaaacta ctgttactaa tagtgacatt tgtaatagta tccatctgag
    10861 cttcagtaat atcacttgtg cttgattgtc ctaagagtcc atttaaataa cttttcaaaa
    10921 ctgggtcagg aatgttgaca acatcttgag cggcttttac actaatttct tcttccgctg
    10981 agacattcgc ggaaaatgat atagtaaatg gcatcattaa aaggacgcac aagccaattt
    11041 tgactcccat ttttctcatg aatttttcct cctttaataa cttttgttcg gtataatcgt
    11101 atgtattctt aaaacaattc ctcttttagt aatatgttaa acaaaatagt atcaaaagtg
    11161 ttgttaaatt aaatcgaaaa aaaaccgtga aagcgatttt cgctttcacg gtttttttat
    11221 taaaagattt tagctaattc tactgcttct tttgctcctg cagagataat gtcttttgct
    11281 tgatcaggtt ttgcgttatg accttctacg ataaccattt ctggctcaga gataccgaag
    11341 tgagctaaca cattttttac atagctcagg gacatttcga agctttgcat tggtccgtca
    11401 gagtaaatgc caccgcgagc attaagcagg gcaatttttt tatcagcaac taaacctaca
    11461 gggccgtttg cagtgtattt aaatgttttg ccagcttgat ttaaatagaa taagtatgtt
    11521 aaaaattggg ctgggatact gaagttccaa agtgggaacg ccatgacgat tttgtctgca
    11581 gctaaaaatt gatctaagta gctgttagca atatcagcta agcgtttttc ttctgggctt
    11641 agtgtttctc cagctgcttc tttatgtaat ccactcatca ttgttacatc ataataaggt
    11701 agatccgctt caaataaatc aagttctgtt acattatcgt ccggatggga ctttttgtat
    11761 tccgttagaa agatttcata tagtgccacg ctgactgagc gttcggcagg taaaccattt
    11821 gctttgatga aaagtacgtt tgtcattaca tcttgcctcc attttttttg aattatctat
    11881 taagtgtagc ccattttcac gataaacagc aagtatattg cttacaaaaa attagccgct
    11941 aatgtttgag cagatatttt gtgcttttgg aaaggaagcg tataatagtt gatatatcat
    12001 ttgacgtatc aactatgggg gtgaaaacgc tgaaaccatg tacagaacga tctgaattac
    12061 tttaccggat gcacttatta tccaaggaaa ttagccatgt atttgaacaa caaacgaata
    12121 tgagttttac gaaagtagag attctatttc atattcaaca aacaccaggt caaagtcaaa
    12181 atcgactacg agagaagctt tatattgatt cggcaagtat tacccgtcat ttgaagcgaa
    12241 tggaagcgca agggctgatt gttcggaaaa agcaagatga aaacaaacgc tatacgtatt
    12301 tatttttaac atcagcgggt gaggcggaat tagccacttt acttttggaa aaagaaaaat
    12361 ttcagaacgg ggcgctagaa gccttttcag aagaagaagt tagtgcgtta cttaaatcag
    12421 tcacaaaaat gatgaataat gtagagaaaa tggaggagaa gtaaaaatga aagcagttgt
    12481 aattgaaaat tatggtggca aagaagaatt aaaagaaaaa gaagtagcta tgccaaaagc
    12541 gggtaaaaat caagtgattg tcaaagaagc agcgacatca attaacccaa ttgattggaa
    12601 acttcgtgaa ggatacttaa aacaaatgat ggactgggaa ttcccgatta ttttaggatg
    12661 ggatgtagcg ggtgttattt ccgaagttgg agaaggcgta acagattgga aagtcggcga
    12721 tgaagtattc gcacgccctg agacaacgcg ttttggtacg tatgctgaat atacagcggt
    12781 agatgatcac ttgcttgcac cacttccaga aggaattagt tttgacgaag cagcatcgat
    12841 tccacttgca ggcttaactg cttggcaagc attgttcgat cacgcgaaat tacaaaaagg
    12901 tgaaaaagtc ttgattcatg ctggtgctgg tggtgttggg acgttggcga ttcagcttgc
    12961 caaacatgca ggagcagaag taatcacaac agctagtgcg aaaaaccatg aattactaaa
    13021 atctcttggc gcagaccaag tcattgatta taaagaagtt aattttaaag atgttctttc
    13081 tgatattgat gtggtgttcg atacaatggg tggtcaaatc gaaacagata gttatgacgt
    13141 attaaaagaa ggcacagggc gtttagttag tatcgtcggt atttcaaatg aagaacgtgc
    13201 gaaagaaaaa aatgtaacag caactggaat ttggttgcaa ccaaacggcg aacagctgaa
    13261 agaacttggc aaattgcttg ctaataaaac ggttaaacca atcgtcggcg caactttccc
    13321 attctctgaa aaaggtgttt ttgatgcaca tgcattaagc gaaacgcacc acgcggttgg
    13381 aaaaatagtc atttcattta ataaataaga ttttcggaaa gctagatgct atcatctagc
    13441 tttttttgtt gtttgctgga ataagttaga tgggctataa tagcaaaaaa ggtggtgtct
    13501 agatggaaat aagagaattg aagaatgggc aaataataat gattcgggaa gctacaaaag
    13561 aggactctag taatattatt acttatttaa atgaagtagc tggtgagaca gattatttat
    13621 catttggtca aggtgagttt gcgtttagta tagcggaaga agctgaatac atagaagaaa
    13681 atgataagaa cccaggctct gttatgttgt tatgttttat tgatgatgaa cttgcgagta
    13741 tttctcaact tatggggcat atgaaaaagc gagaattaca tacttctgaa ctagctattt
    13801 cgatacggaa gaaatattgg ggtctgggta ttggcacaat ttgcatgggt gaattaataa
    13861 aatacgctaa aagtagcgag tatttaaagc ttatctattt agaagctgta tcagagaata
    13921 aacgcgcaat taatttgtac aaaaaatttg gatttatcga agctggtgaa attccagcgt
    13981 taatgcaagt ggacagccgt tatttagatg taaccatgat gtatttggtt atttagtctt
    14041 caataagaaa gactagatca ttaactactt ctatatcact aagttgcttc gcgataatat
    14101 cggctccagt gttaagaaaa atagcaattt gactaagaat acgaaggcta atgtcagaag
    14161 tacgaatatc tttgtcaata attttctgta aagagccttc ttttaagcga gtattggatt
    14221 caacatcagt ggtagtagtg ttattatttg ctaacaattg ttcaatcgga tgcatcattt
    14281 cacctcgttt caatagttaa ctttatgaat taattataac taaatttgct tcttggataa
    14341 actataaagc cttgaaaatt aaacaaaaaa gggagaagca aatgaatgat ttaaaagaca
    14401 tttttaaagt attgtatcag tttaagacag attatctcaa agtaacctta ttattaacaa
    14461 tcttacaggc atttgtgatg gggccattta tttattattt ctttttcttt attctccgag
    14521 tcatcggagt gccaggaatt acagacgcca atcttggaga agttttttcg agtcctgttg
    14581 ccgttattat gctgctgatt ttagctttac tcattttact gtttatatat tatgaactgg
    14641 gtttctttat aatgatggca atttatcaat tgcggggaga aagctatacc gttttcaaaa
    14701 tcatacaaag actcaatgta aaagcgaaat actttcttag ttatcaagca atttattttc
    14761 tgctatattt ctttttactt ttgcccattg caggattatc tttaccaatt acgataacag
    14821 aaaacctcta tttaccacat tttattacgg atgaattaat gaaaacgacg acgggaacgt
    14881 ggctgtatgt tattgcaatt gcgattattt tctatattag cgccagactt gtgtttgctt
    14941 tgccctattt cattgaagac aaatcactaa aaataagtgg ggctatccga aaaagttgga
    15001 aatacccgca aaaaaactta tttttcatgt tactaaaatg ggttttaata attgttgcga
    15061 ttggcttttt agtatcgatt atcgcaacga ttatgatgtt gccgcttctc ttaatagaaa
    15121 aaataactcc gggaattgcg gtgtttatag cgggtattac tttaaccata ctacaagtga
    15181 taggtttctt tgccgctgga atttttcaag gaatcattgc gcaattatta gtgaagaacg
    15241 cctttgctat agaaggacaa ccagcacttg tgacgcgcaa ccagttcccg cataaaaagc
    15301 gatttattat tgtagcgata atcgttttca ttatttttag tagttttaat atttatacag
    15361 tgaatgcgac tttatatgaa cctaacacga aaataatcgc ccatcgaggt gatacaatga
    15421 atgctgttga aaatacggtg gaagccattg aatcagctgc tgaggctggg gcagattaca
    15481 gcgaaattga tattcaagaa accaaagatc atcagtttgt cgttttccat gatatgacac
    15541 tgagaagact tgctggcagt tctaaacgag tagcagatat gactttaaac gagttgcagc
    15601 aaactaaagt gaagagtggc gactattcgt ctcatatagc ttctttcgat gaaattatta
    15661 agacggcgaa aaggaataag atagatttac tcgtggaagt gaagttgcat ggcggggaat
    15721 ctagcgatat ggtggaacga cttgtcacat tgttaaagaa agaaaaagta accgataaat
    15781 atctagtcca atcgttggac caaccagtta tcgaaaaaat agaacaagct gaccctacgc
    15841 ttgaaactgg catcatatta gcgcttaata ttggaaactt accaaaaaca tctgccgatt
    15901 ttattgtttt agaagatttt tctattaata aacgattact tacacaagcc agacaaaata
    15961 ataaaagggt gtttgtttgg acggtaaata aagaaaaact aatgcaaatg tatttgcgaa
    16021 agaatgtaga tggaatcatt accaattatc ctaaaaaggc gatagagctt agggaatctt
    16081 ttaatgaaaa tgattctttg cgaagtcgta ttgaaaatag gttaggcttt taaataaaaa
    16141 gccgcaaaca agcactgttt gcggctgatt tttattttag ttcaaatgat tttttaacag
    16201 cgtttttgct gaaactaatt aattcttttg cttctacatc gactttattt tgtgtatctt
    16261 gtagtttata aagctcagtt acttctaaag ttccaccagg ttgtacgtct ttttcagagc
    16321 cgcccatact agcatcagct gatacggttg tttctaactg agtgccattt tgaaaagctt
    16381 gttgatcaat agctaccata aaagaaatgt tttctttgct gttatttgtg aatttagttt
    16441 taattgcgat ggcattgtta ccttcaaaat ccttaactac ttccgaacta agaatttcta
    16501 ctttataatc tccaagttca tttggatttg ctttcttttt cgtatcggct ttagctgttt
    16561 ctgttttttc tgtacttgct ttatcctcag tcccaccaca tgcagttagt gctagggcaa
    16621 aagtaacaat ccccattaat agtaaaacgc ttttcaattt tttcattttc ttctctcctt
    16681 cattttttat ctgtctctat tagaccatgt ggagagaata aaagtcctat gcagtgggca
    16741 taggactagg aaaagatttc attataaata ccataaatac ttacacaaac gataatataa
    16801 atgacaatac ctgcttttct tgtaccagga gaggatgatt taagtaaagg taatttggac
    16861 caaataccac aaagattagt aaaaatgaca aaagcaggaa cgataagaaa gaaattgtta
    16921 aaaaagttta ctattggcga cattttgacg ccctcggttg gcggggtgaa taaaccaaat
    16981 agcaagaata tataacctaa tacgccgaca atcattttcc aaggtgtccc tgttctaaaa
    17041 ccgggaatat gtttatacca tggaacaaag tccttttcgt aatccgcgga tacattttcc
    17101 cagtcagatt cagtagaaaa attatctaac tcagtaaaat cggataattc agagacgtag
    17161 cttgggccaa gtgagtcgtt tttgacggct gtcctgaaat cttgaatgga ttgataacgc
    17221 tgttcaggat caaaggcagc tgcttgcatc gcaatttttt caagcgaagt ggcatgttct
    17281 ttatctggta aagtattttt tcctaataaa agttcgagca taagaacacc gatactgtat
    17341 atgtccgacc tcacgtctgt ttgtgaatag ccgtattgtt cgggagcagc gtaaccgatt
    17401 gtgccgaggt tgacagtgtc ttgattttta ccgacttcaa atacacggga agcatcaaaa
    17461 tcaattaatt ttaatacgcc gtcgctagat atcataatgt ttgatggctt aatatctcgg
    17521 tgaataatcg cattagcgtg taattctgta agtgcatcag atagcatcag cattaaccgc
    17581 gtaacttcat ccgcatcaaa cgtagcattt gctttcatta aatcagccaa attttttcca
    17641 tttatgtatt cttcataaac aattaattga ttgccatttg gaatcatcac ttcgattttt
    17701 ggcaaatatt tactagataa atctttaagc tgttcgatca caggggcaaa actgcttgga
    17761 attattttac ggacaaataa ttctccagta gatgtatttc tcgttagcac agcagggttt
    17821 tctttattat ttagattatc taattctttg tattgttctt ctataaaagc gagtgtcatt
    17881 tctcccattt atctaaaacc ccttctatac tttatagtaa aattatagca tgaagcatag
    17941 tagtcgggta catatttcgt gctataatga aaaaaacagt cgggggtgtg ccttatggat
    18001 ggggaaaaag agacaagtaa gttacttcat gaattaaaaa aagcgaccaa tttacgccaa
    18061 gtattagatg aaaacgaggc ggaatttaaa tcaagcgaaa tggttaccta tttaaaagaa
    18121 ttattagcag agaaaaaatt aacaaaagca agcgtcattc gtgcggcgag actccatgaa
    18181 acatatggat accaaatttt cagtggcgtt agaagaccgt cacgcgaccg gacgatcgct
    18241 ctttcttttg gatttaaatt aactggttta gaagcaagta gattattaaa atatacagaa
    18301 tatccacctc tttatgcaaa aaatcggcgg gatgcgatta ttatttttgc gttagatcat
    18361 ggttatacgc tagaccaaac gaatgattca ctctatgatt tagaggaagc attaatcgaa
    18421 acatataaag aagaaaaacc acttatttag ctttaactag aaatcgtgta taatttaggg
    18481 agacctaaat gattggagac tagttatgat taatgaacaa acaattttac aagcagcaac
    18541 aagtgaaaaa aacgccggag attttcctaa agtagttcaa agttttaaag aattaggcgt
    18601 aactaaatat caatttttag tcgaaaaagg tatttatgta ttttgggatg aaatggataa
    18661 tcaagtagaa tccaagttaa atggagtttc tatgccaatc tccgaagaaa tttcacgcga
    18721 cagactgaaa gatgcaatta aacaagcaca agcgggaaaa atagattttg aaatatttat
    18781 taaactagct gggctagcag gtgtcagact gtgggaagct gatttatctg caatgaaagt
    18841 aacctatata gataatacgg gaaatgattt gatcgtggaa ccgattccga gtatttaaaa
    18901 tgcaaaagac aataacttat tgtctttttt tagtactttt aaattttgga aatatgttat
    18961 gctgaaacag ttgaaagaag agaggtaaag tataatggat ataattacgt actttctaat
    19021 tgcactaagt acaagtgtgg tagggagttt tttaggaata ggtggcggag ttattctttt
    19081 gccaattcta ctcttaatgg gtgtttctca aggaacagca gcatttagtt cggctcttac
    19141 tgtgttcacg atggcgattt tcacttgtag tatttattac aagagaaagc aagggaatgt
    19201 aggcttggca ctgaaaattg ccgtaactag tatcccgacg acttttcttg gcgcaatggt
    19261 gaatcaaatg ttgccagaag cagtttatcg ctttttgtac ggagcattaa tcgttgtttt
    19321 actagggata atgatttgga aaaagaaacg gcataatgaa aaaccacatt ttttaagtga
    19381 atatcggata attccatatg tattcggtgt aattatcggt tttttagctg gcttatttgg
    19441 tattggtggc gggccaatcg ttataccaat tttgctgtta attttcatgt tgaatcaaaa
    19501 aacggcatcc gcgacatcca gttatgtgac attactgacg tcccttgcaa gtatcggttc
    19561 ctatgcaatc attggtggaa gtgacttttc gattggtatt tacatgatac caggggcaat
    19621 catcggtgcg ctaattggca caagattaaa taaactcctg gatgaaaaat ggattgcgat
    19681 tctattcaat gttttactta tcgccctttt tgctttaaat ttaattaaga tttaacctcg
    19741 gacaagctat gaatgtagct tgtttttttg ttgtcatggc ttgttttatg ttaagcttag
    19801 agagagtagg agggtttaag atgaaaaaaa gttggccaga ttttgctgca tttttactga
    19861 caatcctaac tgtaacttgg ataatattaa catggggatt acatatttct gacattgtac
    19921 caggaggaga aaaaggcgtt tggtataaat taattccact ctttttagga ataatttcaa
    19981 caataagtgt ct
//
LOCUS       DASDYO010000047        19519 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.047, whole genome shotgun sequence.
ACCESSION   DASDYO010000047 DASDYO010000000
VERSION     DASDYO010000047.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 19519)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19519)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19519
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.047"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..128)
                     /locus_tag="U0290_001393"
     CDS             complement(<1..128)
                     /locus_tag="U0290_001393"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall surface anchor family protein"
                     /protein_id="HEM2301438.1"
                     /translation="MKYMVKWRGFFIVAIIGLLVFQNVSPVLATIVDEKTTMITLK"
     gene            complement(397..5529)
                     /locus_tag="U0290_001394"
     CDS             complement(397..5529)
                     /locus_tag="U0290_001394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2301439.1"
                     /translation="MKNIRHWKKLVIAMVIGLLVFQNVSPVLATMTDDETAKTTLKIT
                     KEDKDTKEKINGSTFEIKNKETGETNDLTISANGEATMDSLSPGDYLVKEKVAPKGYT
                     LDEKEYSVTLAEKEEVITSVSAKVQEETTKEATTPTPVKKATQNANLKAAITDNIFNK
                     VTLKDGNGDEINTSDRIQNGSGVVLNMNFAFSGKNYKAGDTFTTVLPDAFNFGNKNLS
                     GNFLPSTEAEWTLDVTTRELTITFLKDGIQEGDYDVNISTAFKVFTSTEETIQEVVFK
                     TAGKDTVYQIEVVPVVNYPTTVGITANPGVVNPTKGQVDAKFNLTKEKDAKGELKLND
                     YASGGTTTIDKDTIKVYSSDVSAGGTFIGTKKLLVEGTDYTLTYSATSLTVTLNGGLA
                     GKGYQVTYDRTINKPSDSLSYMSTQAYTVGDSGTLSSNSAYVYLTMTNYKHIEKKATY
                     NGSTQSIDWKINFNFDQDEISPSTVLTDVLADNDVEYVADSLKIKRVTFNATNGSPIV
                     GGDASSDWTTSAISANGNFNLTYKNTNTNAYEITYSTKITDFSDRKIKNEITDENGVS
                     ADATIAIQPDLLKKEAGTIDYFNNTMTWKITANSDRIKMGNLNITDEFSTGVKALKSY
                     TVRAYTDNINSVLLTEGKDYTIDKDVTPAGFYIQLIGDYATTDKKIVVDFVTEIDLSD
                     VTKTIDNKASISYYDGGIIKYVDDVKASMTPDPAMMTNGGKYGSYNSTTGNIDWIVSV
                     NAMAKNYDNLIFDDAIPTGLTYVEGSLQYRNVASTSEMMNLYIPLNSVGTVAKTGDKN
                     YPTKVDTTGNKLHLEFANLENSRVFIKYSTKPNENWYFYSYVQNTAKVSDNGVGEKSY
                     SYQAYASKLYNAMTKTATIDPSFDNKVNWVVTLNNISADRPINNPTITDTMKTGTTGA
                     QVVKSSFKVINETTGEDIDSKYYDITYTDNNFTIQFKDYKATAPIKVTYSTISLMSGL
                     VSNTATTASPDYGSLPMTYKSRTTSISPAFTIGSGSGTATIGSLEITKVDKKDNTKKL
                     AGAKFQLYTLEGDKAGQEATTDTDGKIVMDGLQSGKYKLVETEAPTGYTISDEYKDGK
                     EITVTADAVTNVTIENTEQTGSAVLLKEDSVTKDAIAGAEFELQNADGTKVAENLVSN
                     ADGKIEVTDLAPGDYQFVETKAPTGYVLDATPSKFTIEFNQEAAVIVTKENTAKTGSV
                     VLTKEDSVTKATIAGAEFDLQKADGTKVSENLVTDADGKIEANDLAPGDYQFVETKAA
                     AGYVLDATPSEFTIEFNQDKAAVVTKENTAKSGSVVLTKQDSATKAALSDAEFELQTA
                     TGTKVKDNLTTNASGEIEVADLAPGDYKFIETKAPTGYELDATPVTFTIEFNQSTAVK
                     VTKENVAKTGSVVLTKLDSKSRSNLAGAEFELQTKLGVSLKDKVVTEANGQLQIDNLA
                     PGDYQLVETKAPTGYELDATPVEFTIEFNQKDAVQVTKTNKMSTGSVVLTKTDGQTKA
                     PLADATFKLVDADNNVTENLTTDASGKLEITNLAPGDYQLIETKAPKGYELDTVPVDV
                     KISFNQNQVLQVTKTNIKTVVSGKVIAEFVDTKGNVLAEQEIHAGLVGEKYVTKAKSI
                     AGYKLTKDPTNKVGIYKEADQKVTFVYEKNKSPLVVDPTKPIKPSKPTKPSANPSKQA
                     TVKKAQSLPSTGDNSLANLIITGLFASTLGLFLLRKSKKVND"
     gene            complement(5710..9165)
                     /locus_tag="U0290_001395"
     CDS             complement(5710..9165)
                     /locus_tag="U0290_001395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2301440.1"
                     /translation="MSHLKKLVSILICTLLIVSFLPFSVWANSQERDGTDVEEITTKE
                     KVTQETTSNETTSEPLKETTVNEAINTKSFPTGNYSGDFSINSQKDVIESGQTVNYNI
                     YLKITGPNTTYQNAKLVINLPKNGEFNQSLNELKIAGETPSYNKTTRQLVYTYQTLNS
                     GVVDKVILKLTTKNGYTPNGTKLVVTGELSADNLLGKVTEQAETTVNATATTALSNDF
                     ARVENSINNNPSQGDIGIWSFNLNIPKKSTGSLFMEEGKKIVIEYILADKLDYLGVAG
                     DTPEPTKVEGQKLTWEIAAPTYLEQEKANSLLNKTFQIRTFFQTTIPNFATVENKAVA
                     TTNFVTLADSIVDTSKASVSVSASDPATIPPTIGSVYAPAHRGPVDANWGIATVTGNP
                     DIKAYDTAKLGFSLMLNSAMNDSPSYDFLYYDAYYNIDDNLNLDYFQSGDFYFKPNVN
                     YPGWAQLKKSPKYNLLVKYDGDSDWTTLKEDVELSKMYSRKDLGIPDDKHVSKVWLHF
                     TYAPAGMYAANLSFFTTVKEGYVGEVRNSTQINMYGADSQGYIHYYDDTNPWPEAWKN
                     YAGDRTAQIIPQPTGKNKFVQGSVAFDDTDGNLINIGDNSISVNLESNKASISRLKGP
                     FEAVVLLPSGVKMKKTEQNDFNVTVLNENYQNAGRQLLKVKWDKKTLLPAEKLTAKIN
                     VSVAKDTPSNMTVEMFGFLQETDFNVPEVTGTPTISDTKMEIDSDDINQNGNSEESRI
                     TSGNHYILNTSNHLKISKKAKGNRDKEYSGLANATTNSIVSYQLSLENDSDEKIANMV
                     LMDVLPSENDLGITDNSERGSKFNLELTKAVAIPNEWKDKVDVKYSTAKNPKRAGVLD
                     KHTIYPTGSEPLVDNAEATEADWLTASEVQDWSKIYSFKMELKEGIEWIPGKSMKIQF
                     DLKTPKKNQIDKGFLNQQTKKEDRAAWNSFAVAVNNSQVIEPAQVGVALDDSVAPVTV
                     QYVDQNHKQIASPETLTGAYGEKFTAKQKKITNYTLVKTPANVSGTFNEKAQTVTFVY
                     QKVTAGNIIVDYVDKNGEKLADSIVLTGKLNSSYRTSAKKISGYKLYQTPKNASGKFL
                     NSSQKVTYVYEKTSALSVSSNERAGNVKKSEKLPQTGDSKKTNLWFILGMLLLSSAFV
                     LAKKR"
     gene            complement(9358..9834)
                     /locus_tag="U0290_001396"
     CDS             complement(9358..9834)
                     /locus_tag="U0290_001396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465704.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HEM2301441.1"
                     /translation="MKLYELTDNYLKVQEFLEENNTDAVKDTLDALTDSFHDKSENIV
                     KLIKSLAADAEMAGIEAKRLLKRKQALENNVQNLKNYLQTEMERMEIRKINSTLFTIQ
                     IQKNPPSVEIVEEALLKSFFLLQEPKIDKKRIAEILKSGEEVKGARLVESESIRIR"
     gene            complement(9895..10635)
                     /gene="srtB"
                     /locus_tag="U0290_001397"
     CDS             complement(9895..10635)
                     /gene="srtB"
                     /locus_tag="U0290_001397"
                     /EC_number="3.4.22.71"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465705.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class B sortase"
                     /protein_id="HEM2301442.1"
                     /translation="MKIKSFLGKSLTLVVLVVFLFSGWKIGMELYENKHNQTILDDAK
                     AVYTKDVATTNVNGEVRDELRDLQKLNKDMVGWLTIADTEIDYPILQSTDNDYYLHHN
                     YKNEKARAGSIFKDYRNTNEFLDKNTIIYGHNMKDGSMFADLRKYLDKDFLAAHPTFS
                     YESGLANYEVEIFAVYETTTDFYYIETEFPETTDFEDYLQKVKQQSMYKLNVKVSGKD
                     RIITLSTCDTEKDYEKGRMVIQGKLVTK"
     gene            complement(10639..11418)
                     /locus_tag="U0290_001398"
     CDS             complement(10639..11418)
                     /locus_tag="U0290_001398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465706.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301443.1"
                     /translation="MEVRDVNFSYNGTESTLKNVSFTIQKNKINTIVGPNGSGKSTLL
                     EILARLLSPDSGDVLLEGKSIFEWKAKEFAQNVAIVHQNNVLPNELTVKELLYFGRLP
                     YKNWRMTRTKADDLAVEQALMQTELTEKAEKFVDSLSGGERQRVFIATALVQDTPILL
                     LDEPTTFLDMYFQLEILELVKRLNQEKNLTIVMILHDLNQALMYSDHLIVMKNGKVVA
                     KGVPGELLTTELIAETYGVVAKVLNDANTGKYIVPQKRKEF"
     gene            complement(11399..12388)
                     /locus_tag="U0290_001399"
     CDS             complement(11399..12388)
                     /locus_tag="U0290_001399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465707.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron ABC transporter permease"
                     /protein_id="HEM2301444.1"
                     /translation="MTIKQKSSFGAVIILLIGTILWAVQAGSLSMSIPAFLSGVFSGG
                     NEMVNVVIDLRFPRIIIALLAGAALSVSGLLLQAVMRNPLADAGVIGISAGAKFFSFV
                     IILFLPELYFWLPLFSFIGGALAFFLVFLFSYRSDFNPLRFIIIGIAINAVFTGLSDA
                     LSSQVALVSSQSASSAASLAMKKWSDVETLLIYVTIGLICALLLAKWCNVLGLENKMA
                     RGFGVPVNKTRIWLALIAVLLASITTAVVGVIAFVGLLVPHIARKLVGGNYQILVPFS
                     ILFGALLLLFADTLGRTLFQQMEIPASVIMLIIGGPFLIFLMRKGDFYGSKGR"
     gene            complement(12378..13250)
                     /gene="isdE"
                     /locus_tag="U0290_001400"
     CDS             complement(12378..13250)
                     /gene="isdE"
                     /locus_tag="U0290_001400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465708.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme ABC transporter substrate-binding protein
                     IsdE"
                     /protein_id="HEM2301445.1"
                     /translation="MRKMAVISLMLLLFLVGCGKEEAAQKPEQKSEKEPKIVATTVAI
                     TEIMDKLDLPLVGIPTSSKKLPERYADVKETGSPMGPDLEIIRMLKPDMVLSTKTLEA
                     DLKAGFEGADLKADFLDFTSIASMQTEIKKLGAEFDRKEEAAKLNGDLTNEIDKVKSS
                     VAKKKKPTVLILMGVPGSYLVVTEHAYIGDLVKLAGGENVIKDQKVEYLASNTEYLQS
                     ANPDIILRAAHGMPAEVVKMFDEEFKTNDIWKHFDAVKNNRVYDLDENLFGMTASLNA
                     PEALQEMEKMLYDN"
     gene            complement(13337..15046)
                     /gene="hbp2"
                     /locus_tag="U0290_001401"
     CDS             complement(13337..15046)
                     /gene="hbp2"
                     /locus_tag="U0290_001401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465709.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hemin/hemoglobin-binding protein Hbp2"
                     /protein_id="HEM2301446.1"
                     /translation="MKKLWKKGLVAFLALTLIFQLIPGFANAADSRLKDGGEYQVQVN
                     FYKDNTGKTTKESSEADKYIDHTATIKVENGQPYMYLTITNSTWWQTMAVSKNGARPE
                     KPAQADVYQDRYEDVQTVSTDAAKDTRVEKFKLSSLDDVIFSYMHIKVDAISYDHWYQ
                     VDLTIDPSTFKVISEPAITTPVTLSDGIYTIPFVAKKANDDSNSSMQNYFNNPAWLKV
                     KNGKKTVAMTVNDNKTVTALKTNLAGALQDVKVVSEDKDANTRIVEFEVEDLNQPLAA
                     HVNYEAPFNGSVYKGQADFRYVFDTTKATAASSYPGSDETPPVVDPGETKPPVTKPDP
                     GTTNPPVTTPPTTPSKPAVVDPKNLLNNHTYSIDFDVFKDGTTETSMMESYVMKPALI
                     KVENNQPYVYLTLTNSSWIKTFQYKANGVWKDMEVVSGDINKNTRTVKYPVKDGRANT
                     DVKTHVLIEDMPGFSYDHEYTVQVKLNAATIKDITGEDVTLKEPVKKDILNTGNVANN
                     NNAGPKLAKPDFDDTNSVQKTASSTEKNAKTNDSSSMAWYVTLFGASFLYLAYRLKRK
                     RLS"
     gene            complement(15059..15685)
                     /gene="isdC"
                     /locus_tag="U0290_001402"
     CDS             complement(15059..15685)
                     /gene="isdC"
                     /locus_tag="U0290_001402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme uptake protein IsdC"
                     /protein_id="HEM2301447.1"
                     /translation="MKKVLVLAAFIALFSFSFLSTGLTAQAALKDGTYSVDYTVLQGD
                     SDSVSMANDYFDKPATVTVNGGKSTVSLQVNHSKWITGLWVEGSAVSVTSKNTANDTR
                     KVSFPVSTLSSPVNAKIKVDIDDDDLNYHHEYQIKLRFDEGSAKALAGAVKSSDNNDT
                     ATPATKSDSSNKVANPKSSDSSQMFLYGIIFVAAGTGLVLLKRRAIFK"
     gene            complement(15896..16156)
                     /locus_tag="U0290_001403"
     CDS             complement(15896..16156)
                     /locus_tag="U0290_001403"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465711.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3116 family protein"
                     /protein_id="HEM2301448.1"
                     /translation="MEFEDEKLLREVLLFAGSVDTKINDMSLEVIDFGNLRDYTKNEV
                     LLTLYWLEENGFLTRNNNIAEKRYTLTLKGELLYDRFSQIEE"
     gene            complement(16455..18260)
                     /gene="pepF"
                     /locus_tag="U0290_001404"
     CDS             complement(16455..18260)
                     /gene="pepF"
                     /locus_tag="U0290_001404"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465712.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oligoendopeptidase F"
                     /protein_id="HEM2301449.1"
                     /translation="MSKTNALPLREEVPENLTWDLTTIYPNDEAWEQAFTDLQKITEE
                     SEQFKGRLSESSQTLYEALQFRDNAYDLISNLYVYAHLKMDQDTANAKYQGLHSRAGS
                     LVTKLMSALSYYDPEILAMDESVLKQFLNENKDLQLYAHLLEELNLSRPYILSEKEEA
                     LLANAGEVLGSSSNTFNTLNNADMKFPTIKDENGEDIEITHGRFGKLLESNDPRVRRE
                     AFLGVYSVYEGLKNTLASTLNGQVKKSNFYASTRGYTSAREAALSGNHIPETVYDSLL
                     KSVNANADLLHRYVKLRKELLGLEELHMYDLYTPLSDDVNLEFTYEEAKELVLEALKP
                     LGDEYQAILKEAFDSRWIDVMENKGKRSGAYSSGSYSTSPYILLNWQDNINNVYTLAH
                     ELGHSVHSYYTRKNQPFVYGDYSIFLAEVASTTNENLLTDYLLKKYDDPKVRAYLLNH
                     YLDGFKGTVFRQTQFAEFEHAIHQADQEGVALTADYLTETYFDINKKYYGEAMVYDAE
                     IGYEWSRIPHFYMNYYVFQYATGFSAASALSAKILTEGQEAVTAYIDFLKAGSSDYPI
                     DVLKKAGVDMATPNPVDDALKVFEQRLDELEKLVK"
     gene            complement(18333..19448)
                     /locus_tag="U0290_001405"
     CDS             complement(18333..19448)
                     /locus_tag="U0290_001405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="competence protein CoiA"
                     /protein_id="HEM2301450.1"
                     /translation="MIIIFTARNNMGETFTITKMNVERIKQEERLFCKSCASPVMIKA
                     GQIKIPHFAHEKTMKCAFASEGESEEHLAAKKQIMAWYCYQSIPVEVESYFPEIKRQA
                     DIFVNGKAVIEFQRSSISISEMIQRTMDYLSIGLEVHWILGQVVRKEKGRICLSAFQQ
                     AFIQSDKKLGYHFWHYSTEREICTLYYHLTFEKGNRFFASEMKFSMKAPFSEWKKKLA
                     RIITRHAYVKRDRELERQKICFYYAKFKKHGQFMQKLFNAGYYLHYLPKEIGVDLEEQ
                     FLVITPAVEWQFDLWEKFFKGLEKGDTFSECCFFESFQSVVTQILTIWLSPNESLKLG
                     KSYLSYLIGEGVLSTIPDNRYRVKRKMVFTNTRAAHI"
BASE COUNT         5581 a         3996 c         3035 g         6907 t
ORIGIN      
        1 attttaagcg ttatcattgt tgttttttca tcaacaatgg ttgctaatac aggcgacacg
       61 ttttgaaaaa cgagtaaacc aataattgca acgataaaaa aacctctcca tttcaccata
      121 tatttcatta agctgttttc ctcctatgca agttgtgtct gttgtataag acctatgact
      181 tgttgaatta taacaatggg cgagaagtcg aaaatgttct taaagaacaa caaagcggat
      241 ttattgtgtc tttttagtga acaaaaaagt atgttttttg ctaaaaatat actttttcaa
      301 tacaaaaccc tcttttcctg cattattata tggaattttt tctatatata atagataaaa
      361 aagtcgctat cctgttaaga atagcgacta caattattaa tcatttactt ttttggattt
      421 tcttagtaag aaaagtccta gtgtactagc gaataatccg gtaatgatta gattagctag
      481 ggaattatct cctgttgaag gaagactttg tgcttttttc actgtggctt gttttgaagg
      541 gtttgctgat ggttttgttg gtttagaagg tttaattggt ttagtagggt cgacaacgag
      601 tggtgattta tttttctcat atacaaaggt tactttttga tctgcttctt tgtatatgcc
      661 gactttattc gtagggtctt tcgttagttt ataacccgcg atagatttcg ctttagttac
      721 atatttctcc ccgactaaac ctgcatgaat ctcttgttct gctaatacat ttccttttgt
      781 atcaacaaat tcagctatta ccttgccgct tacaactgtt ttaatatttg ttttagttac
      841 ttgaagcact tgattttgat taaaactgat tttcacatcg actggaacgg tatctaattc
      901 ataacctttt ggtgctttcg tttcaattaa ttgataatca ccaggggcta gattagttat
      961 ttccagttta ccagaagcat ctgttgttag attttctgtg acgttattat ctgcgtctac
     1021 taatttaaac gttgcatctg caagaggggc ttttgtttgc ccatcagtct tagttaacac
     1081 aacagatcca gtagacattt tatttgtttt agtcacttga actgcatctt tttggttaaa
     1141 ttcaatggtg aattcaactg gtgttgcatc aagctcataa cctgttggag ctttcgtttc
     1201 tactaattgg tagtcgcctg gtgctaagtt atcaatttgc agttgaccat ttgcttctgt
     1261 cactacttta tctttcaaac tgacaccaag ttttgtttgt aattcgaact ctgcaccagc
     1321 taaattactt cttgatttac tatctagctt agttaagacc acactaccag ttttcgcaac
     1381 attttctttt gttactttga ctgcagtcga ttggttaaat tcgatggtaa aagtaaccgg
     1441 tgtggcatct aattcgtagc ctgttggtgc tttggtttca atgaacttgt aatcgcctgg
     1501 tgctaaatca gctacttcta tctcaccact tgcattcgtt gttaaattat cttttacttt
     1561 agttccagtg gcagtttgta gttcaaattc cgcatcagat aacgcagctt ttgttgcact
     1621 atcttgtttt gttagaacta cgctgccaga ttttgctgtg ttttcttttg ttacgacagc
     1681 tgctttgtct tggttaaatt caatcgtgaa ttcgcttggc gttgcatcta atacatagcc
     1741 agccgcagct ttcgtttcta caaattggta gtctcctggt gctaaatcgt ttgcttcgat
     1801 tttaccgtct gcgtctgtta ctaagttttc ggatactttt gttccgtctg ctttttgtaa
     1861 atcgaattcc gctccggcta tcgtagcttt cgttacacta tcttctttcg ttagaaccac
     1921 actaccagtt ttcgctgtgt tttcttttgt aacaattaca gcggcttctt ggttaaattc
     1981 aatcgtgaat ttgcttggcg ttgcatctaa tacatagcca gttggcgctt ttgtttctac
     2041 aaattggtaa tcgcctggcg ctaagtcagt tacttcgatt ttaccatctg cattagatac
     2101 taagttttca gcgacttttg taccgtctgc attttgtaat tcgaattctg ctcctgcgat
     2161 agcgtctttc gttacactat cttcttttaa aagaaccgcg ctaccagttt gctctgtgtt
     2221 ttcaattgta acgtttgtaa ctgcatcggc ggtaaccgtg atttctttac cgtctttata
     2281 ttcatcacta attgtgtaac ctgttggcgc ttctgtctca actagtttat atttcccaga
     2341 ttgaaggcca tccatcacga ttttaccatc tgtatcagtg gtagcctctt gtcccgcttt
     2401 atcaccttca agcgtataaa gttggaattt agctcctgct agttttttcg tattatcctt
     2461 tttatccact ttggtaattt caagtgaacc aattgttgcc gtcccgctac cactaccaat
     2521 agtgaaggct ggcgatatgc ttgttgttct tgatttatat gtcattggta aactaccgta
     2581 gtcaggagaa gcagttgtcg ctgtgttact aacaagccca gacatcaagc tgattgtact
     2641 ataggttact ttaattggtg cagttgcttt atagtctttg aactggatag tgaaattatt
     2701 gtctgtgtaa gtgatgtcat aatattttga gtcaatatct tcacccgtcg tttcattgat
     2761 tactttaaag ctacttttta ctacttgcgc tcctgttgtt cctgttttca ttgtatctgt
     2821 aattgttgga ttgttaatag gacgatctgc agagatattg ttcagtgtaa caacccagtt
     2881 aactttatta tcaaaagatg gatcaatagt agccgttttt gtcatcgcat tataaagttt
     2941 gcttgcgtat gcttggtaac tgtaagattt ttcgcctact ccattatcgc tcaccttcgc
     3001 agtgttttgt acgtaggagt agaaatacca gttttcgttt ggtttggtac tgtatttaat
     3061 aaatacgcgt gaattctcca agttagcgaa ttctaaatgt aatttattcc cagtagtatc
     3121 gacttttgtt gggtagtttt tatcacctgt tttagctact gttccaacag agttaagcgg
     3181 gatgtataaa ttcatcatct cacttgtgga agccacatta cgatattgta gtgagccttc
     3241 tacgtatgtt aatccagttg gaatagcatc atcaaaaatt aagttgtcat agtttttcgc
     3301 catagcattt acagatacaa tccaatcgat attccccgta gtggagttgt acgatccgta
     3361 tttaccacca tttgtcatca tagctgggtc tggtgtcatg gaagctttta catcatcaac
     3421 atacttgata attccgccat cgtaataaga aatggatgct ttattatcaa tcgtttttgt
     3481 tacatcagaa aggtcaattt ctgtgacgaa atcaactaca atttttttgt ctgttgtagc
     3541 ataatcgccg ataagttgaa tataaaaacc agctggtgtc acatctttat caatcgtata
     3601 atctttgcct tctgttaata agacgctatt gatattatct gtataggcac gaacagtgta
     3661 gctcttaagg gcttttacac cagtagaaaa ttcatctgtg atattaagat tccccatctt
     3721 aattctgtca gagttggcag tgattttcca tgtcatcgtg ttattaaaat agtcaattgt
     3781 tccagcttct tttttcagta aatctggttg aatcgcgatc gttgcgtcag cggaaacacc
     3841 attttcatct gtaatttcat ttttaatttt acgatcacta aagtccgtga ttttcgtgga
     3901 ataagtgatt tcatatgcgt ttgtgtttgt gtttttatac gttaaattaa aattcccatt
     3961 tgccgagatt gctgaagttg tccaatcact tgaagcgtca cctccaacga ttggcgatcc
     4021 attcgttgcg ttaaaagtta ctcgtttaat tttaagtgaa tctgctacat attcgacatc
     4081 attatccgct aaaacatcgg taagcactgt tgaaggagat atttcgtctt gatcaaagtt
     4141 aaagttaatt ttccaatcaa tactttgtgt tgagccgttg taagtagctt ttttctcgat
     4201 atgcttataa tttgtcattg tcaggtaaac ataagcggag ttgcttgata atgttcctga
     4261 atcgcctact gtataagctt gtgtagacat ataagaaagt gaatcacttg gtttattgat
     4321 tgtgcggtca tatgttactt ggtagccttt cccagcaagc ccaccgttta acgtaacagt
     4381 tagagaagtt gcggaataag ttagcgtata atctgtgcct tctacaagta attttttcgt
     4441 acctatgaag gttcccccag cactaacatc actcgaatat actttgatgg tatctttatc
     4501 aatagttgtt gttccaccgg aagcataatc attaagtttc agctcaccct tagcatcttt
     4561 ttcttttgtt aagttgaact tggcatctac ttgacctttt gtcggattta ctacccctgg
     4621 attcgccgta attcctacag ttgttgggta gttaactact ggtacaactt cgatttgata
     4681 aacagtatct ttcccagctg tcttgaaaac aacttcctgt atcgtttctt ctgttgaggt
     4741 aaacactttg aaggctgtac tgatattcac atcataatcg ccttcttgaa tgccatcttt
     4801 taagaaagta atcgtaagtt cacgcgttgt aacgtcaagc gtccattctg cttctgtaga
     4861 tggtaagaag ttaccactta aatttttgtt cccaaagttg aaagcatctg gtaaaacagt
     4921 tgtaaacgta tctcccgctt tataattttt cccagaaaac gcaaagttca tgttaagcac
     4981 aacaccgcta ccattttgaa ttcggtctga agtgttgatt tcatcgccat taccatcttt
     5041 tagcgttact ttgttaaaaa tattgtctgt aatagcagct tttagatttg cattttgtgt
     5101 tgctttttta accggtgttg gtgttgttgc ttcttttgtt gtttcttctt gcacttttgc
     5161 tgaaaccgaa gtaatcactt cttctttttc tgctaaagtt acactatatt ctttttcatc
     5221 tagtgtgtaa ccttttggcg caactttttc tttaacaaga tagtcaccag gtgaaagtga
     5281 atccatagtc gcttcaccat tcgcgctgat tgttaaatcg tttgtttcgc ccgtttcttt
     5341 attctttatc tcaaaggtag aaccattgat tttttctttt gtatctttat cttctttggt
     5401 gatttttaat gttgtttttg ccgtttcatc gtctgtcatt gtagctagta caggtgaaac
     5461 gttttggaat actagtaatc cgataaccat tgcaataact agcttcttcc agtgtctgat
     5521 atttttcact ttgttttgtc ctcctataat ctatttctaa ctgttgttaa atccctaaaa
     5581 gatttgttga gttttgacaa ataaatgcac ccaataatta ctttttgcga aatccaaagt
     5641 aatatgtgtc tttttaataa gcaaaatgaa ttggaaacac tttaaacacc ttttaaaata
     5701 cttttaatat catcttttct ttgcaagtac aaaagcactt gaaagtaaga gcattccaag
     5761 aataaaccat aaattagttt tcttagaatc tcccgtttgt ggcagttttt ccgatttttt
     5821 cacatttcca gctctttcat tagaagaaac tgataaagcg ctagtttttt catacacata
     5881 agttactttt tgtgagctat tcaaaaattt ccccgatgca tttttaggtg tttgatacaa
     5941 tttatatccc gagatttttt tggccgaagt tcgataactt gaatttaatt ttcctgttaa
     6001 aacaatcgaa tcagctaatt tttcaccatt cttatcgaca taatcgacaa tgatgtttcc
     6061 ggctgtcact ttttgataaa caaaagtaac tgtctgtgct ttttcgttaa atgttccact
     6121 tacattcgcg ggtgttttta caagggtgta gttagtaatt tttttctgtt ttgcagtgaa
     6181 tttttctccg taagctcctg ttaatgtttc tgggctggca atttgtttat ggttttgatc
     6241 aacatattgc accgtaactg gcgcaacact atcatctaaa gccactccta cttgggccgg
     6301 ctcaattact tgagaattat ttacagccac agcaaatgaa ttccatgctg ctcggtcttc
     6361 tttttttgtt tgctgattta aaaatccctt atctatttgg tttttctttg gtgtttttaa
     6421 atcaaattga attttcatgg atttcccagg aatccactca ataccttctt ttaattccat
     6481 tttaaaagag taaattttgg accaatcttg tacttctgat gcggttaacc aatctgcttc
     6541 cgttgcttct gcgttatcaa ctagaggctc tgaaccagtt ggataaatcg tgtgcttatc
     6601 gagaacgccc gcacgtttag ggtttttggc agtactatat tttacgtcaa ccttatcttt
     6661 ccattcattt ggaattgcca ctgctttcgt tagctccaag ttgaatttac taccacgttc
     6721 gctgttatct gtaattccta aatcattttc acttggtaaa acatccatta aaaccatatt
     6781 agctattttt tcatctgaat cattttccag tgacaattga tatgaaacaa tggaatttgt
     6841 tgtggcattt gccaatccgc tgtattcttt atcgcgatta cccttagctt ttttactaat
     6901 tttcaaatga ttactcgtat ttaaaatgta atggtttccc gatgtgattc tagactcttc
     6961 cgaattccca ttttgattaa tgtcatctga gtcaatttcc atttttgtat cagaaatggt
     7021 tggagttcca gtcacttccg gcacattaaa atctgtctcc tgcaagaaac caaacatctc
     7081 aacagtcata ttactaggtg tgtcttttgc aacactcaca ttaatttttg ccgttaattt
     7141 ttctgctggc aaaagcgtct ttttatccca tttgactttt agtaattgac gccctgcgtt
     7201 ttggtaattc tcgttcaaca ctgttacatt aaagtcgttt tgctccgttt ttttcatttt
     7261 gacccctgaa ggtaacaaaa ccactgcttc aaaaggacct tttaatcgtg aaatagaagc
     7321 tttattgctt tctaaattaa cagaaataga attatcacct atgttgatta aattcccatc
     7381 ggtatcatca aacgcaactg atccttgtac aaatttattt ttaccagtag gttgcggaat
     7441 tatttgcgct gttcggtctc ctgcataatt tttccaagct tccggccaag gatttgtatc
     7501 gtcataataa tggatatagc cttgactatc cgctccgtac atgttgattt gtgtactatt
     7561 tctaacctca cctacataac cttctttgac tgttgtaaag aaagatagat tagcagcata
     7621 cattccagct ggagcatacg tgaaatgaag ccatacttta ctcacgtgct tatcatctgg
     7681 aatcccaaga tcttttctcg aatacatttt gctcagttct acatcttctt ttagtgtcgt
     7741 ccagtcgcta tcaccatcat atttcacgag taaattatac ttaggtgatt tctttagttg
     7801 cgcccaacca gggtaattaa catttggttt aaagtaaaaa tcgccgctct ggaagtaatc
     7861 caaatttaaa ttatcatcta tattgtagta agcatcataa taaaggaagt cgtacgaagg
     7921 tgaatcattc atcgccgaat ttaacatcaa actaaagcct aatttagcag tatcatatgc
     7981 ttttatatca ggatttccgg tcacagtagc gattccccaa ttcgcatcca ccgggcctct
     8041 gtgtgctgga gcataaacac ttccaatagt tggcgggatt gtcgctgggt cacttgctga
     8101 aactgaaaca gatgctttgg atgtatctac aatgctatca gccaaagtaa caaagttcgt
     8161 tgttgcaaca gctttatttt ccaccgttgc aaaatttggt atagtagttt ggaagaacgt
     8221 tctaatttgg aaagtcttgt taagtaaact gtttgctttt tcttgttcca aatatgtagg
     8281 tgctgcaatt tcccaagtta gtttttgtcc ttcgaccttc gttggttctg gtgtatctcc
     8341 tgctacacct aagtaatcta gcttatctgc caatatatac tcaataacaa tcttcttacc
     8401 ttcttccata aaaaggcttc ctgtagactt tttcggaata tttaggttga aagaccaaat
     8461 cccgatatca ccttgactcg gattattgtt gatgctattt tctaccctag caaaatcatt
     8521 tgataaagct gttgtggctg ttgcgttgac agttgtttca gcctgttcgg ttacttttcc
     8581 aagtaaatta tctgcactta attcacctgt tactactaat ttcgttccat ttggtgtgta
     8641 gccatttttc gtagtcagct taagaatcac tttatcaact acaccactgt tcagtgtttg
     8701 atatgtgtaa acgagctgac gagttgtttt gttataactt ggcgtttctc ccgcaatctt
     8761 aagttcattt aatgattgat taaattcccc attttttggt aaattgatta ctaatttagc
     8821 attttggtat gttgtgtttg gtccagtaat ttttaaataa atgttatagt ttaccgtctg
     8881 accagattca atcacatctt tttgagaatt aatactaaag tcccctgaat aattcccagt
     8941 tggaaatgat tttgtgttta ttgcttcatt gactgtggtc tcttttaaag gctctgaagt
     9001 agtttcattt gaagtcgttt cctgcgtaac cttttctttc gtagttattt cttctacgtc
     9061 cgttccatcc ctttcttgac tatttgccca aactgaaaat ggaagaaatg aaactatcag
     9121 caaagtacaa attaatatag atactaattt tttcaaatga ctcacattcg cccctccttt
     9181 gtttactcaa gattaattat ttcataggag gaagcagcta aatgttctca aggtacaaaa
     9241 aataggacag tttgttacga aaatgtgaac tattttacgt ttatagtcgc aaaaatgtca
     9301 ttattaacaa aaaacaacca aaattgttga agaattcaac gattttggtt gttttattta
     9361 tcttattcga atcgattcgc tttcaactaa tctagcaccc tttacttcct caccagattt
     9421 tagtatctct gcaattcgct ttttatcaat tttaggttct tgtagtaaaa agaacgattt
     9481 tagcaaagct tcttccacta tttccacact tggtggattc ttttgtattt gaattgtaaa
     9541 aagtgtactg tttatttttc taatttccat tcgttccatc tctgtttgta aatagttttt
     9601 taaattttga acattatttt ctagtgcttg ttttcgtttt aaaagtcgtt tcgcttctat
     9661 tcccgccatt tcagcatcag cagctaaaga cttaataagt ttaacaatat tctctgattt
     9721 atcatgaaaa ctatcagtaa gcgcatctaa cgtatctttc acagcatcag tattattttc
     9781 ttccaaaaat tcttgtactt ttaaataatt atcggttagt tcatatagtt tcatcgttcg
     9841 caccctttcc aaaaaaggaa aaagcgccaa atgttattat attttggtgc tttctcattt
     9901 tgttactaat tttccttgaa taaccatccg tcctttttca taatcttttt ctgtatcgca
     9961 agttgaaagt gttataattc ggtcctttcc actaactttt acatttaatt tatacataga
    10021 ttgttgtttc actttttgta aataatcctc aaaatcagtt gtttccggaa attctgtttc
    10081 aatgtaataa aaatcagtcg tcgtttcata cacagcaaag atttccactt cataattcgc
    10141 caagcccgat tcataggaaa acgttggatg agccgccaaa aaatctttgt ccaagtattt
    10201 acgtaaatcc gcaaacatgg atccgtcttt catattatgc ccataaatga tcgtattttt
    10261 atccaaaaac tcattcgtat tccgataatc tttaaaaata ctgcccgctc gtgctttttc
    10321 atttttataa ttgtgatgta aatagtaatc attatccgta ctttgcaaaa ttggataatc
    10381 tatttccgta tctgcaatcg tcagccaccc aaccatatct ttatttaatt tttgcaaatc
    10441 tctaagctca tcacgtactt caccattcac atttgtagta gcaacatctt ttgtgtaaac
    10501 agctttcgca tcatctagga ttgtctggtt atgcttattt tcatacagtt ccattccaat
    10561 tttccatcca gaaaaaagaa aaaccactaa cacaaccaag gtcaaacttt tccccaaaaa
    10621 cgattttatt ttcactcttt aaaactcctt tcgcttttga ggaacaatgt atttcccagt
    10681 gttcgcatcg tttaaaacct tcgcaactac accataagtt tcagcaatca gctccgttgt
    10741 tagtaattct cctggtactc cttttgcaac cactttccca tttttcatca caatcaaatg
    10801 gtcactatac atcaacgctt ggtttaagtc atgcaaaatc attacaatag tcaaattttt
    10861 ttcttgattt aaccgtttta ctaactctaa aatttctagt tgaaaataca tgtccagaaa
    10921 tgtcgtcggc tcgtccaaca gcaaaatagg tgtatcttga accaatgctg ttgctataaa
    10981 aacacgctgc cgctctcctc cagaaagact atcaacaaat ttctccgctt tttcagttag
    11041 ctccgtttgc atcaaagcct gctcaacagc cagatcatcc gccttcgtcc gagtcattcg
    11101 ccaattttta taaggtagac gaccaaagta aagcaattcc ttcaccgtta gttcattcgg
    11161 aagaacgtta ttttgatgaa caatcgctac attttgcgca aattcttttg ctttccattc
    11221 aaaaatcgat ttcccttcca gtaaaacatc cccagaatca ggcgaaagaa gtctagccaa
    11281 aatttctaat aaagtagatt tcccactacc atttggccca acaatcgtat tgattttatt
    11341 tttctggatc gtaaatgaga cattttttaa ggtagactct gttccattat aactaaaatt
    11401 aacgtccctt acttccataa aaatcaccct ttcgcattaa aaagattaag aatggaccac
    11461 caataataag cataatcaca gatgccggga tttccatttg ctgaaataac gttctgccta
    11521 gcgtatccgc gaaaagtagc aataaagccc caaataatat tgaaaacggc acaagtattt
    11581 gataatttcc gccaactagt tttctggcaa tatgtggtac aagtaaacca acaaacgcaa
    11641 taacaccaac taccgccgtg gtaattgacg caaggagtac agcaatcaat gccagccaaa
    11701 tacgtgtctt attaaccggc acaccaaagc ctctagccat cttattctca agccccaaca
    11761 cattgcacca tttagcaagt aaaagcgcgc aaatcagtcc aatcgttaca tatatcaata
    11821 aagtttccac gtcggaccat tttttcattg ccaaacttgc agcactactg gccgactgac
    11881 tagaaacaag cgccacttgc gaagataacg catcactcag ccctgtaaaa accgcattaa
    11941 tcgcaatccc aataataata aaacgaagcg gattaaaatc agaacgataa ctaaacaaaa
    12001 agactagaaa aaaagccagt gctcccccaa taaaagaaaa aagtggcaac caaaaatata
    12061 attccggtaa aaataaaata atcacaaaac taaaaaattt cgcacccgca gaaatcccaa
    12121 tcaccccagc atcagcaagc ggattccgca tcacagcttg aagtaacaac cctgaaaccg
    12181 atagcgccgc accagctagc agggcaataa taattcgcgg aaatcgcaaa tcaatcacga
    12241 cattcaccat ctcatttccg ccactaaaaa ccccactcaa aaaagctgga atcgacatcg
    12301 acaaacttcc cgcctgaact gcccacaaaa tagtcccaat caataaaata attacagccc
    12361 caaaagaact tttttgctta attgtcataa agcatctttt ccatttcctg tagtgcttct
    12421 ggtgcattca aactcgctgt cataccaaat aaattttcat ccaaatcata cacccgatta
    12481 tttttcaccg catcaaaatg tttccaaata tcatttgttt taaattcctc gtcaaacatt
    12541 ttaaccactt cagcaggcat accatgagcc gcccgcaaaa taatatcagg attggcactt
    12601 tgtaagtatt ctgtattaga agctaaatat tctacttttt ggtccttaat gacattttct
    12661 ccaccagcaa gtttgaccaa atcaccaata tacgcatgtt ccgttacaac taagtagctg
    12721 cccggaaccc ccatcagaat aagaacagtt ggctttttct ttttcgccac gctcgacttc
    12781 accttatcaa tctcattcgt taaatcacca tttaatttag ctgcttcctc tttacgatcg
    12841 aattctgctc caagtttttt aatttctgtt tgcatcgagg caatactcgt aaagtctaga
    12901 aagtccgctt ttaaatcggc cccttcaaac ccagccttta agtccgcttc tagcgttttc
    12961 gttgaaagga ccatgtctgg cttcaacatc cgaataattt ccaaatcagg ccccataggc
    13021 gacccagttt cctttacatc tgcataacgc tccggaagtt ttttagaact agtcggaatt
    13081 ccaacgagtg gcaaatcaag tttatccata atttccgtaa tcgctaccgt agtcgccaca
    13141 atttttggct ccttctccga tttttgttca ggcttttgag ccgcctcttc ctttccacag
    13201 ccaactaaaa aaagtaataa catcaaagat atgacagcca ttttcctcat cactaattcc
    13261 cccatttata aaataaaatc ggtaaagcga gttaagcaaa ggaaaccccc aacctaactc
    13321 gcttttacta gttttattaa ctcaatcttt tacgttttaa tcgataagct aaataaagga
    13381 aggaagctcc aaataacgta acgtaccatg ccatacttga tgaatcattc gttttcgcat
    13441 ttttttctgt gctacttgcc gttttttgaa cagaatttgt gtcatcaaaa tcgggttttg
    13501 ccaattttgg cccagcatta ttgttattcg ctacattgcc agtatttaaa atatcctttt
    13561 tcaccggttc ttttaacgtt acatcttccc cggtaatatc tttaattgtt gctgcattaa
    13621 gttttacttg aaccgtatac tcatggtcgt aagagaagcc tggcatatct tcaattaata
    13681 catgcgtttt tacatctgta ttagccctgc catcttttac aggatacttg acggttctcg
    13741 tatttttgtt gatatctccg gaaacaactt ccatatcttt ccaaacacca tttgctttat
    13801 actggaaagt tttaatccag ctactgtttg ttaaagttaa ataaacataa ggttggttat
    13861 tttctacttt gattaaagcc ggtttcatca catagctttc catcatagaa gtttccgttg
    13921 ttccgtcttt aaatacatca aaatcaatgg agtacgtatg gttattcagt aaatttttag
    13981 gatcaactac tgccggttta cttggtgttg ttggcggcgt agtcactggt ggattcgttg
    14041 tacctggatc aggttttgtt actggtggtt ttgtttcgcc tggatctact acaggaggcg
    14101 tctcatcact accagggtac gaactagccg cagttgcttt cgttgtatca aacacataac
    14161 ggaagtctgc ttgtcctttg tatacagaac cattgaacgg cgcttcataa ttaacatgag
    14221 ccgcaagtgg ttgatttaaa tcctccactt caaattccac aatacgcgtg tttgcatctt
    14281 tatcttcaga aactactttg acatcttgca aagctccagc aagatttgtt tttaaagctg
    14341 ttactgtttt attatcattt actgtcattg caacagtttt cttcccattt ttcactttca
    14401 gccaagcagg attattaaaa taattttgca tgcttgagtt gctatcatca tttgcttttt
    14461 tcgctacaaa aggaatcgtg taaattccgt ccgaaagagt cacaggtgtt gtaatagccg
    14521 gttctgaaat aactttgaaa gtacttggat caatggttaa atccacttga taccagtgat
    14581 cataactaat tgcatctact ttaatatgca tataagagaa aataacatca tctaaagaac
    14641 taagcttgaa tttctctaca cgcgtatctt tcgctgcgtc tgtgctcact gtttgaacat
    14701 cttcataacg atcttgataa acatccgctt gtgctggctt ttctggacga gccccatttt
    14761 ttgaaaccgc cattgtttgc caccaagtac tatttgtaat tgttaagtac atataaggtt
    14821 gaccattttc tactttaatc gttgctgtat ggtcaatata tttatctgcc tctgaagatt
    14881 ctttcgttgt tttccctgta ttatctttat aaaaattcac ttgaacttgg tattccccgc
    14941 catctttcag acgagaatca gccgcattag caaaaccagg tatcaattga aaaataagtg
    15001 tcaaagccaa gaaagctact aaaccttttt tccataattt cttcatcata atcccccttt
    15061 atttaaaaat cgcacgtctt ttaagtaaaa ctaaccctgt ccctgctgca acaaaaataa
    15121 ttccatataa aaacatttgg ctagaatcac tagacttcgg atttgctact ttattacttg
    15181 agtcactttt tgttgctggg gttgctgtat cgttattatc agaagacttt accgcgccag
    15241 ctaatgcttt agcagaacct tcatcaaaac gtaacttgat ttgatactca tgatgataat
    15301 ttaaatcgtc atcatcaata tctactttga tttttgcatt aacaggacta cttaaagtcg
    15361 acacaggaaa cgacactttt cgagtatcat tcgctgtatt tttcgaagtc acgctaaccg
    15421 cactaccttc gacccataaa ccagtaatcc acttactatg gttcacttgc aaactaacag
    15481 tagatttgcc tccatttaca gttaccgttg caggcttatc aaaatagtca ttcgccatag
    15541 atacggaatc actatcccct tgtagtaccg tataatcaac cgaataggtg ccatccttaa
    15601 gagcagcttg tgccgttaat cccgtagaaa gaaacgaaaa actgaataag gcaataaaag
    15661 cagccaaaac taaaactttc ttcatactta aatctccctt ctttaataaa aactactatt
    15721 tataaaaaac ccccactaat aaaagtggag taaaagttta tgtaaaagga tacgttaatt
    15781 atcattttaa ttgataatga ttatcattgt caacaacaga ttgctttttc acaaattaaa
    15841 aacgcaaaaa aaccatgaat agcaacaacc atccatggtt aataattatc tccttttact
    15901 cttctatttg agaaaagcga tcatatagta attccccttt taaagttaac gtatatcttt
    15961 tttctgcaat attattattt cttgttaaaa agccattctc ttccaaccaa taaagcgtta
    16021 gtagtacttc attttttgta tagtcccgca gatttccaaa atcaatcact tcaagtgaca
    16081 tatcattaat cttcgtatct acacttcccg caaaaagaag tacttctcgt agtaattttt
    16141 catcttcaaa ttccatcttt aatcctcctt taattctgag ttagtatcgt aataacgtaa
    16201 aaagccgtag caaaatgcca cggcttctta cagcgcaatc aaaaggagaa attcacacaa
    16261 tcaaataaag ggggtatttg tttgtgattt atttcacggt tataatatac catataaacg
    16321 cttataattc aatagttcac atacctattt ttatttgtct atcctatgaa tattggcatc
    16381 actcaaacat acgaaaaaaa agactcgcag ccattatcgc tacgatgtct ttttttagca
    16441 aatttcacaa tatattattt aactaatttt tctagttcat ctaatctttg ttcaaatact
    16501 tttagtgcat catccaccgg attaggagtt gccatatcaa ctcctgcttt tttcaacaca
    16561 tcgataggat aatccgaact tcccgctttc aagaaatcaa tataggcagt caccgcttct
    16621 tggccttctg ttaaaatctt cgcactcaat gcagatgctg cagaaaaacc agttgcatat
    16681 tggaacacat aataattcat ataaaaatgc ggaatacgag accattcata accgatttca
    16741 gcatcataaa ccatcgcttc tccgtaatat ttcttgttaa tatcaaaata tgtttcggtc
    16801 aagtaatccg cagtcagcgc cactccttct tgatccgctt gatgaatagc atgttcaaat
    16861 tcagcaaatt gggtttgacg gaatacagta cccttgaatc catccaaata gtgattcaac
    16921 aagtaagcac gaacttttgg atcatcatat ttcttaagaa gataatcagt tagtaaattt
    16981 tcatttgttg tcgaagcaac ctccgctaag aaaatcgaat aatcaccata aacaaatggt
    17041 tggttttttc ttgtataata actatgcaca ctatgcccta attcatgcgc aagtgtgtaa
    17101 acattattaa tattatcctg ccaattgagt aaaatataag gactcgtact atacgaacca
    17161 gaagaatagg ctccactacg ttttccttta ttttccatca catcaatcca acgactatca
    17221 aatgcttctt ttaaaattgc ttgatattca tcaccaagcg gtttaagcgc ttcaagcaca
    17281 agttctttcg cttcttcata agtaaactcc aaattaacat catcagaaag tggcgtataa
    17341 agatcataca tatgcaattc ctctaagcca agtaattctt tacgtaactt cacataacga
    17401 tgaagcaaat ctgcattcgc atttactgat tttaacaagg aatcatatac tgtttcagga
    17461 atatggttcc cagaaagagc cgcttcacga gctgacgtgt agccacgagt ggaagcataa
    17521 aaattagact tcttcacttg tccattcaaa gtagaggcta aggtgttttt taggccttca
    17581 taaacagaat acacaccaag aaacgcttca cgacgaactc gcggatcatt actttccaac
    17641 aatttcccga aacgaccatg agtaatttcg atatcttccc cgttctcatc tttaatggtt
    17701 ggaaacttca tatctgcatt attcaaggta ttaaaagtat tagacgaact gccaagcact
    17761 tcacctgcgt tagctagtaa agcctcctct ttctcactta aaatatacgg tcggcttaga
    17821 tttaactctt ctagtaaatg cgcatataat tgtaaatctt tgttctcatt taaaaattgt
    17881 tttaaaacgc tttcgtccat agctaaaatt tcaggatcat aataagacag tgcagacatt
    17941 agctttgtaa ctaggcttcc tgcgcgacta tgtaaacctt gatatttcgc attagctgta
    18001 tcttggtcca ttttcaaatg cgcatataca tataagttac taattaaatc atatgcatta
    18061 tctcgaaatt gaagtgcttc atatagtgtc tggctgcttt ccgataaacg ccctttaaat
    18121 tgctcgcttt cttctgtgat tttttgcaaa tctgtaaatg cttgttccca agcttcatcg
    18181 tttggataaa tcgtagttaa atcccaagtt agattttctg gtacttcttc tcttaaaggt
    18241 aatgcatttg ttttactcaa tattaaaacc cccaaccata gtcattttgt ttttattatg
    18301 agccaaaata actaaaaaag caaaacagat gattatatat gtgctgctcg agtgttagta
    18361 aaaaccattt tccgtttcac acgatatcga ttatctggta tggtagataa caccccttca
    18421 ccaatcaaat aagaaagata tgattttcct aacttcaaac tttcatttgg agaaagccag
    18481 atagttaaaa tttgggttac aactgattga aaactctcaa aaaagcagca ttcgctaaaa
    18541 gtatctcctt tctccagacc tttaaaaaac ttttcccaca aatcaaattg ccattcaaca
    18601 gcaggtgtga taactaaaaa ttgttcttct aaatccacac ctatctcttt cggtaaataa
    18661 tgcaaataat aaccggcatt aaataatttt tgcataaatt gtccatgttt tttaaattta
    18721 gcataataaa aacaaatttt ttgtctttcg agttctctat ctcgttttac ataggcatgg
    18781 cgtgtaataa ttctagctaa cttcttcttc cattcactaa aaggtgcctt catagaaaat
    18841 ttcatttcac ttgcgaaaaa acgatttcct ttttcaaatg ttagatgata ataaagtgta
    18901 caaatctctc gctcagtaga atagtgccaa aaatgataac ccaatttctt gtcagactga
    18961 ataaaagctt gttggaatgc agaaagacaa atacgcccct tctccttcct aaccacttgc
    19021 ccgagtatcc agtgaacttc taatccaatt gataagtagt ccattgttcg ttgaatcatt
    19081 tcactaattg aaatagaaga acgttgaaat tcaattactg ccttcccatt cacaaaaata
    19141 tctgcttgtc gttttatttc tggaaaataa ctttccactt ccacaggaat actttgatag
    19201 caataccagg ccatgatttg ttttttagct gctaaatgtt cctcgctctc cccttcagaa
    19261 gcaaatgcac acttcattgt cttctcgtgg gcaaagtgcg gtatttttat ctgtcctgct
    19321 tttatcatta ctgggcttgc acaagactta caaaacagtc tttcttcttg cttgattcgt
    19381 tccacattca tcttagtaat agtaaaagtt tctcccatgt tatttctggc tgtaaaaata
    19441 attatcactc tcctattagc tctttaatat tattattcgc caaggagcat ccaaattcct
    19501 ttcttatttt taaaatcac
//
LOCUS       DASDYO010000048        19460 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.048, whole genome shotgun sequence.
ACCESSION   DASDYO010000048 DASDYO010000000
VERSION     DASDYO010000048.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 19460)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19460)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19460
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.048"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(509..1285)
                     /locus_tag="U0290_001406"
     CDS             complement(509..1285)
                     /locus_tag="U0290_001406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding protein"
                     /protein_id="HEM2301451.1"
                     /translation="MDGIYQHFRAEEYAFIDKILGITMQVENEYTPQLTDFLDPRQRF
                     ITETVIGGYDEINVQFFGGVAHAERRRALIYPDYYTPTEADFEIALFHIRYPVKFTTL
                     THQKILGTLMSLGMKRDIFGDILNNGTEWQLLVESTMKDYLTLQLEKIGKVNVMLEET
                     DLANAVYAPVVWEEMGLTVSSMRLDVIISNAHHISRQKAKQLVTAGLVKVNWKTVENP
                     DFECEEEDVLSARGYGRVKVLSTGGRTKKDKIRIEIGYLK"
     gene            complement(1410..1700)
                     /locus_tag="U0290_001407"
     CDS             complement(1410..1700)
                     /locus_tag="U0290_001407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggT family protein"
                     /protein_id="HEM2301452.1"
                     /translation="MQSILYQVVEIILFIIRWLPTLMFIYFLMSWFPGARESKIGQFL
                     ARIFEPILEPFRRIIPPIGMFDISSLVAYFIFQYAMRVLTGLIQVYVIPMLF"
     gene            complement(1723..2181)
                     /locus_tag="U0290_001408"
     CDS             complement(1723..2181)
                     /locus_tag="U0290_001408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein SepF"
                     /protein_id="HEM2301453.1"
                     /translation="MGLSNKFKSFFFLDEEEEYYEEEVAREPEPMQKKTKKEKPNKNR
                     FYAVEEDDAKVVSMQGAQFSSRMVLAEPRVYAEAQELADYLKEYKSVVVNLQRISHDQ
                     ATRIVDFLSGTVYALGGDIQRVGNNIFLCTPDNVEVDGSISEMLDEQNFM"
     gene            complement(2185..2874)
                     /locus_tag="U0290_001409"
     CDS             complement(2185..2874)
                     /locus_tag="U0290_001409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YggS family pyridoxal phosphate-dependent
                     enzyme"
                     /protein_id="HEM2301454.1"
                     /translation="MTKQANLQKVTAQIERACEESNRQPEDVTLVAVTKTIDVAGITE
                     LYDLGIRHFGENRADVFQEKTVALADKEDICWHYIGSLQTRKVKDVLPKIDYLHSLDR
                     SSLAKEIEKRATKPVKCFLQVNISGEESKHGFSKEEALSFLQEANFTFIEIVGLMTMA
                     PITNSDIELHHVFHELKQLQQEIHALQLNNIPCTELSMGMTNDYGVAITEGATFIRVG
                     RALVSDDNMEV"
     gene            complement(2993..4168)
                     /gene="ftsZ"
                     /locus_tag="U0290_001410"
     CDS             complement(2993..4168)
                     /gene="ftsZ"
                     /locus_tag="U0290_001410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsZ"
                     /protein_id="HEM2301455.1"
                     /translation="MLEFDTSSESLATIKVIGVGGGGNNAVNRMIEHGVQGVEFISVN
                     TDAQALNLAKAETKLQIGTKLTRGLGAGAVPEIGKKAAEESREQIEEALKGSDMVFVT
                     AGMGGGTGTGAAPVIAQIAKEMGALTVGVVTRPFGFEGPKRTKQALTGTEAMKEAVDT
                     LIVIPNDRLLQIVDKNTPMLEAFREADNVLRQGVQGISDLIAVPGLINLDFADVKTIM
                     TNRGSALMGIGIATGENRAAEAAKKAISSPLLETSVDGAKGVLMNITGGSNLSLYEVQ
                     EAAEIVSSASDEDVNMIFGSVINDELKDELIVTVIATGFDEEKQAQQQAQANRRPNQS
                     IQVNRPNYAVQDEQQNDYAQNAPQQANAPVHEQQAEPQQNSSDVDVPAFIRNRNRRG"
     gene            complement(4235..5515)
                     /gene="ftsA"
                     /locus_tag="U0290_001411"
     CDS             complement(4235..5515)
                     /gene="ftsA"
                     /locus_tag="U0290_001411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsA"
                     /protein_id="HEM2301456.1"
                     /translation="MGDSEIYVSLDIGTASVKVIIAEMADDRLNIIGVGNVESSGIKK
                     GIIIDIDKTVESIKKAIEQAERMVGVEISQVIVGVVSSQVHLEACRGIVAVGSENREI
                     TDEDVWNVMDAAQVVPLSPEREIINTIPDQFVVDGLTGITDPRGMIGVRLEMEGTLIT
                     GSKTILHNTLRCVERAGLEISDIALQPLAEASISLSEDDKEFGTALVNVGAGTTTVSV
                     FEQGRLTYTGVIPVGGDNITKDLSLGLNTSTANADRVKLDHGYAFYDDASPDEVFAID
                     VIGSDQKQHFTQVEVADIIEARMEEIFQLVVEELTRVGKTHLPGGYVLTGGSMAIPGA
                     IDLAGKTLAAHVRLAIPDYIGVREPSFTTAVGLIKYAYQMAELEGRDVSSSASEPRYD
                     DEAPKQKQPKPKQKKSDDEKVSTKMKNFFGAFFE"
     gene            complement(5880..6692)
                     /locus_tag="U0290_001412"
     CDS             complement(5880..6692)
                     /locus_tag="U0290_001412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsQ/DivIB"
                     /protein_id="HEM2301457.1"
                     /translation="MAENKRVISIENRIPELKKYRKKKLVRHLAILIGIFVILIAITL
                     YFLSPLSKLDKIAVSGNKQLTENEVRKESGLEIGEFVIGISNGKTEDTLKKNTLIKDA
                     TVSKEGINDVQINITEFKTIGYQQQDGKYYDVLESGIMLTDQPRQFPIGNDLLFQNFK
                     NGKTLEKMVAQINKLPKDVVSSISEVIYSPTKTDKNHIKLYMNDGNQVSADISTFAEK
                     MQHYPAIVAQLAKGQKGVIDIEVGSYFQSYYQQNAEKKAAEEAAKEKKETNE"
     gene            complement(6715..7806)
                     /gene="murG"
                     /locus_tag="U0290_001413"
     CDS             complement(6715..7806)
                     /gene="murG"
                     /locus_tag="U0290_001413"
                     /EC_number="2.4.1.227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyldiphospho-muramoylpentapeptide
                     beta-N-acetylglucosaminyltransferase"
                     /protein_id="HEM2301458.1"
                     /translation="MKVAISGGGTGGHVYPALALIRELKKIHPEAEFLYIGTEKGLEA
                     GIVKREGIPFEAIEITGFKRSLSLENIKTVMRFLSGAKKSKQILRDFKPDVVIGTGGY
                     VCGPVVYAAAKLKIPTLIHEQNSVAGLTNKFLSRYTDKVAICFEEVSDSFASEKIVFT
                     GNPRASEVVGVDSEGALETYGLVSGKPTVLVFGGSRGARGVNEAVEAILPEWNNRDFQ
                     LLYVTGDVHYERIKDSLAELNLGNHISVQPFIYDMPKILNAVTLVVSRAGATTLAELT
                     ALGVPSILIPSPYVTANHQENNARALEKNNAAIVITEAELKNTDLMATVDSILNDEAK
                     LNGMKLSAKQMGRPDAAAKLVEAVLSIMK"
     gene            complement(7803..9170)
                     /locus_tag="U0290_001414"
     CDS             complement(7803..9170)
                     /locus_tag="U0290_001414"
                     /EC_number="6.3.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanine--D-glutamate
                     ligase"
                     /protein_id="HEM2301459.1"
                     /translation="MKKIEMYHHKKVLVLGLARSGVSAATIMHKLGAFVTVNDQKPFS
                     ENPEAQGLLEQGIKVICGSHPIELLDEGFELVIKNPGIPYNNPMIEKALKLKIPVITE
                     VELAYQISEAPIVGITGTNGKTTTTTIIHHMLNAHKENSSLLAGNIGFPASAVAENAT
                     SDQYISMELSSFQLMGVETFKPHISVITNIYEAHLDYHTDRSEYVQAKWHIQKNQTAD
                     DFLVINWDQEELKNLTKQTKAQVIPFSTTQRLGQGSYVQNGNIMFNDEVIGARDNILL
                     PGEHNLENVLASVAVAKTLGVTNEEIMHVLETFKGVEHRTQFVVEWQGRKFYNDSKAT
                     NILATQSALKGFKNPVVLLAGGLDRGNSFDELLPFFKNVKALIVFGETADKIGRVGKI
                     AGIDVHYVDNVEAAVPVAYRESAPGDIILLSPACASWDQYRTFEVRGNAYMDAIGELI
                     EEVEK"
     gene            complement(9312..10286)
                     /locus_tag="U0290_001415"
     CDS             complement(9312..10286)
                     /locus_tag="U0290_001415"
                     /EC_number="2.7.8.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-N-acetylmuramoyl-pentapeptide-
                     transferase"
                     /protein_id="HEM2301460.1"
                     /translation="MSLYMLVSTFAVAFIITVIGVPLFIPFLVKLKFGQSIRDEGPKM
                     HEKKSGTPTMGAVVFITAMLISFLIFSFISGEVSAATWLLFIALALFGALGFLDDYIK
                     VVQKRNLGLTSKQKFLGQVAISILFYLVYHLNGFAETLNIPFTNIEVDLGWFFVIFIL
                     FWLVGFSNAVNLTDGLDGLVSGLSVIAFSAFGVIAFYQEQMDVAIFCFAIVGGMLGFL
                     LFNKNPAKIFMGDTGSLALGGSIAAISILVHQEWLLLLIGIIFVIETASVILQVFYFK
                     ATGGKRIFRMTPIHHHFELGGWSEWRVVLTFWGIGLIGAIISVCVVIF"
     gene            complement(10333..11808)
                     /locus_tag="U0290_001416"
     CDS             complement(10333..11808)
                     /locus_tag="U0290_001416"
                     /EC_number="6.3.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,
                     6-diaminopimelate ligase"
                     /protein_id="HEM2301461.1"
                     /translation="MKLNELMQAIPVFTGEASETIEISHIAQDSRKVKPGTLFICIDG
                     ELVDGHQFASRAVELGAVAIIAEKQLDVSIPVIYVRDSKRAMAMLADYFYGSPTQALK
                     LVGITGTNGKTTVSHLVEQIVRENGEQTGLIGTMYRKIGDQILETKNTTPDSLTLQET
                     FRDMLLSGVSTAVMEVSSHALVQGRVYGSDYDVAVFMNLSQDHLDYHHTMEEYANAKS
                     LLFAQLGNSYHTSNPKIAVLNADDEESVRMQKATAAHVITFGIKQQADFKASNIRITS
                     HGSTFDLRTPIGNFTLKIKMIGNFSVYNVLAAIATSFALHIPMEKAIKTVESIPGVKG
                     RFELVHAGQEFPVIVDYAHTPDGLLNVLETIAEFAEKRVFVVVGCGGDRDKGKRPQMA
                     KIAVDYATNPIFTSDNPRSENPRAIIEDMIQGVPYSDSYVVHENRRDAIRFAVNEAEA
                     GDVILIAGKGHEDYQVIGDEVIDFDDRVEARIAIEKKLGLA"
     gene            complement(11983..14238)
                     /locus_tag="U0290_001417"
     CDS             complement(11983..14238)
                     /locus_tag="U0290_001417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding protein"
                     /protein_id="HEM2301462.1"
                     /translation="MKRRIGNMRRGALVLFIFFTILFLLVSGRFLYLQITGEANGVPL
                     AAKASKQHLKSSVLEAKRGSILDRKGEVLAEDTASYTVAAVVSDKLSKTTKNPMRVVD
                     EEKTARILAKYIPMDESDILDKLNEKGKYQVEFGAAGKNISTETKAKIDKENLPGIEF
                     TRQSERFYPNGTFATQLIGFAQQEEEKNTTVLEGKMGIESRYNDILTGKNGKIDYSTD
                     RMGYILPNSKNKVTEAKDGKDITLTLDKKIQTFLEDTMTTVDAKYKPKNMMAVVADPK
                     TGEILAISQRPSFNPADRSTITGNSSSIWQDLPVEYAYEPGSVMKIISLASAIDTNTY
                     NANEYYQSGSYKVGDIAIHDHNNGNGWGSITYREGVERSSNVAFAKLLNKMGTDTFKT
                     YLDKFGFGKKTGIALPNETSGKILYNYPIEKVTTVFGQGTTVSMMQMIQAASAIASDG
                     TMKEPYVVSSVKDPNTGEETDTKTKIAGKPISAETAKKTRDELKNVISGEHGTGKLYA
                     IPGYDVAGKTGTSQIPDPKTGKYMTGADNYIFSFLGMAPADNPELVIYVTMQQPQLSG
                     SQTGGEAVSEVFNPVMKNSLQYMNIKPGDAEKLASEKVPVLAGKTIDEAKKIVKDKGL
                     EPIIVGNGKKIVQQLPQANAEIMQGQKVILMTDGDMTAPDMVTWSKDDALKVSEITGI
                     PFEFSGNGYVKSQSVSAGSVINSETKMKITLAPPEEISAFNQNHDQDTAEKNKKATDI
                     QENAGIGDLLN"
     gene            complement(14235..14597)
                     /gene="ftsL"
                     /locus_tag="U0290_001418"
     CDS             complement(14235..14597)
                     /gene="ftsL"
                     /locus_tag="U0290_001418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division protein FtsL"
                     /protein_id="HEM2301463.1"
                     /translation="MSNVAYKSNLEPNRVHREAEQPKKQILKRGQMTLGEKVIITIAL
                     AIVLVVAFRIISVQAQIYTVNQEIQTKETKILEQQKSNEDLKVEVKDLGRYERILKIA
                     KEKGLKLDGDNVKVVDGQ"
     gene            complement(14614..15552)
                     /gene="rsmH"
                     /locus_tag="U0290_001419"
     CDS             complement(14614..15552)
                     /gene="rsmH"
                     /locus_tag="U0290_001419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (cytosine(1402)-N(4))-methyltransferase
                     RsmH"
                     /protein_id="HEM2301464.1"
                     /translation="MFKHETVLLHETVDMLEVKPDGIYVDATLGGAGHSEYLLNKLNE
                     KGHLFAFDQDQTAINNAKIKLADYSDKVTFIKANFRDMKEALNERGIEAVDGILYDLG
                     VSSPQLDERERGFSYHQDAALDMRMDQEQELTAKIVVNEWSYQDLIRIFFQYGEEKFS
                     KQIAREIERRREVKPIETTGELVDIIKTAIPAPARRKGGHPGKRTFQAIRIAVNDELG
                     AVEDSLEKALTLLKPGGRISVITFHSLEDRITKHLFQEATKGPDLPPGLPVIPDEYKP
                     DFKLATRKPIVPSEEELEQNNRARSAKLRVIEKIIK"
     gene            complement(15565..15996)
                     /gene="mraZ"
                     /locus_tag="U0290_001420"
     CDS             complement(15565..15996)
                     /gene="mraZ"
                     /locus_tag="U0290_001420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="division/cell wall cluster transcriptional
                     repressor MraZ"
                     /protein_id="HEM2301465.1"
                     /translation="MFMGEYQHNIDIKGRLIVPAKFRELLGDNFVITRGLDKCLFAYP
                     QEEWKKLEEKLQTLPLTKKDARSFTRFFFSGASECELDKQGRINIPSNLLQYADLEKE
                     TVIIGVSSRIEIWSKSEWDDVFNEAEESFADLAENMIGFDI"
     gene            complement(16199..17446)
                     /locus_tag="U0290_001421"
     CDS             complement(16199..17446)
                     /locus_tag="U0290_001421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2301466.1"
                     /translation="MFRELHPNIRARILIQFLSKVIGSMIFPFMAIYFSREINSSVAG
                     FLLMINVLAQFLAGMYGGHLADIIGRKKLMVTGELLKVFAFLGMVLCNSPMFHSPWIT
                     FVMLLIIGVAQGLINPAGEAMLIDVSTPENRSFMYSVSYWANNLSIMIGIMVGGWFFV
                     DYLFPLLVVLFIMSFVTAWLTISLISETLQQKEMPHKGSYGLMGMLKNYGQVLHDYRF
                     LLYTIGGIAIMSIEFQRSNYISVRLAEDVKALLVHLGPLGNISLNGVQIVSVLTAVNT
                     LFIVLFTVPIARFVTKRAQQPIMYVGFTLFALGFAVCAFANNLTVLLLATMVLSIGEL
                     LYVPTRQTVLAAIVDDERRGAYMAFNGIIFQIGKMIGSVSLVFAPFIGKYGMGAFTIT
                     LGVLSIVFSAVALKSGWEKVLVK"
     gene            17563..19377
                     /locus_tag="U0290_001422"
     CDS             17563..19377
                     /locus_tag="U0290_001422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SgrR family transcriptional regulator"
                     /protein_id="HEM2301467.1"
                     /translation="MDKDYFTMRAHLYNITTDLEVSFKLNDVANIWFCTTKNAKRKLQ
                     QYQAKKMLTYLPGLGRGNVSRIIFPKQLELEVLDVLEQSLAEDAFSDILFLLQLPIPK
                     SWFTSISTEIQQIFGLQVTENQQEVLRSIVRRKLTTLDPLQTSVSMEAFLITQISDSL
                     VKYDEEKKKIIPHIAHHWKVSDDFTEWTFYLRKSVLFHHGRMLDSEDVKHTLMRSMQT
                     ESVSFWQLQDIQSIHCPNKFTISIQLKKTDPFFIRYLCTANMAILPRDIIFDEYTWIS
                     TGPFRVAERNDERLVLEAFDGYFLERPILDRVEFWTAQTGNNLKTIPMQFTSVDYEEN
                     LAYVERRKPGVGVNFICFNTHRNGAPQHPAFREAIYHLIDCQKASEQHFENYGTVASN
                     YYPEKSLPPKKHPEKIATLLKKANYQGEKVIFGTTQHPTAVKESKWIQEQAVEFGINL
                     ERKIITHQEASYSNVPAKETDFMMMGEIPASDDEMAYLDFLNNPYLLPQQLFNQAIIK
                     ELTEKLDAFKTEKDASKRDALQTSIDSWLTENHYLIYLHHPEKSQSLHSMIKGIAENP
                     YGYFDLSKVWIEISPLKTLKPDYRQSHRGKAPHTITQK"
     gene            complement(19307..>19460)
                     /locus_tag="U0290_001423"
     CDS             complement(19307..>19460)
                     /locus_tag="U0290_001423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3397 family protein"
                     /protein_id="HEM2301468.1"
                     /translation="VIVVTAAKKEGEIQFRKILRGYWRLCFFIFALLYVALYLYGIVY
                     SLVLMF"
BASE COUNT         5664 a         4156 c         3224 g         6416 t
ORIGIN      
        1 atgatcacat ctatatattg atcattatag ttagctttat tgttcgttgt tttgtagaaa
       61 ctcgcgataa aaaatatttt tagtacataa ccatagcatt tacccttttt ccaaaagagt
      121 ttcaatgcta tacaaaaaga gtaagcaagt ttatggtggt ggctagctct ttcaacaaga
      181 aagggtgatg ctatgaatat ttttgttagg attgcctgga aaggataacc catgactgtt
      241 tatgaagcac tgtcttttgc aaccctggtg ttgctattga acagtcaaaa taacaaaaaa
      301 taaccactca taaactttgg tcggtttagt ggttattttt ataatctatt aagctagctg
      361 ccaccttaaa tgggcttata cttgagagtc atcttagcgc atgactctct tttcatattt
      421 aataataaca taagaccatt tgacaacata tgacattagg tactactcat tactatatct
      481 gaaacgaaag cagcaactgc tttcgttttt attttaaata gccaatttca atcctaattt
      541 tatctttttt cgttctgccg ccagttgata gtacttttac ccgaccatat ccgcgagcag
      601 acaatacatc ttcttcttca cattcaaaat ccgggttttc cactgttttc cagttgactt
      661 ttactagtcc cgcagtaacc aattgtttcg ccttctgtct agaaatatga tgtgcattac
      721 taataatcac gtcaagtcgc atactagaaa cagttaagcc catttcttcc caaacgaccg
      781 gggcataaac agcattagct aaatccgttt cctctaacat cacatttact ttcccgattt
      841 tttctagttg taatgttaaa taatccttca ttgtactttc tactaataac tgccattcag
      901 tgccattatt taaaatatct ccaaaaatat cacgcttcat tccaagcgac atcagtgttc
      961 caaggatttt ttgatgtgtg agggtcgtga attttaccgg gtagcgtata tggaacaaag
     1021 caatctcaaa atccgcttct gtcggcgtat aataatctgg ataaatcagt gcgcgccgtc
     1081 gttctgcgtg cgccactcca ccaaaaaatt gtacattgat ctcatcataa ccaccgataa
     1141 ctgtttcggt aataaaacgc tgcctcggat ccaagaaatc cgtaagttgt ggcgtgtatt
     1201 cattctcaac ttgcatcgta atccctaaaa tcttatcaat aaatgcgtat tcttccgcgc
     1261 gaaaatgctg ataaattcca tccatcctaa tttctccctt tcaatccgtt ccgagtcttt
     1321 agccctatta taccatgaaa acagctgcta ctaggctaat cttgcttatt aataaaaaaa
     1381 gccacccatt ttgaaaacgg gcgcgctttt taaaatagca ttggaatgac atacacttga
     1441 attaaaccgg ttaaaactct catcgcgtat tggaaaatga aataagccac aagggacgaa
     1501 atatcaaaca taccaatcgg cggaataatc cttctaaaag gctctaaaat cggttcaaaa
     1561 atacgagcta aaaattggcc gatttttgat tctcttgcac cgggaaacca gctcatcaag
     1621 aaataaataa acatgagtgt tggcaaccat ctgataataa acaaaatgat ttccaccact
     1681 tgatataaaa tactttgcaa tctagctcac acctctactt catcacataa agttttgttc
     1741 atcgagcatt tcggaaatag agccatccac ttccacattg tctggagtac ataagaaaat
     1801 attattgcca acgcgttgaa tatctccacc taatgcatat actgttccac tcaagaaatc
     1861 gacaatacgt gtcgcttgat catggctaat acgttgcaag tttacaacaa cagatttata
     1921 ttctttcaaa taatccgcaa gttcttgtgc ctctgcatac acacgcggtt cagcaagtac
     1981 catacgacta gaaaactgag ctccctgcat actaaccacc ttcgcatcat cttcttctac
     2041 agcataaaaa cgatttttat ttggtttttc tttcttcgtt ttcttttgca taggttctgg
     2101 ttccctcgct acttcctctt cataatattc ctcttcttca tctaagaaaa agaatgactt
     2161 aaatttattc gatagtccca tttgttacac ctccatatta tcgtcactca ccaaagctct
     2221 tcctactcgt ataaatgttg caccttccgt aattgcaact ccataatcat tcgtcatccc
     2281 catagataac tctgtacatg gaatattgtt taactgaagc gcgtgaattt cttgctgcaa
     2341 ttgctttaac tcatgaaata cgtgatgcag ctctatgtcg ctatttgtaa taggtgccat
     2401 tgtcattaaa ccaacaatct caatgaacgt aaaattcgct tcttgtaaaa aagatagcgc
     2461 ctcttctttg gaaaatccat gtttgctttc ctcaccagaa atattcactt gaaggaaaca
     2521 tttcactggt ttagtagctc gcttttcgat ttcctttgct agcgatgatc ggtcaagcga
     2581 atgcaaataa tcgatttttg gtaaaacatc ttttacttta cgtgtttgta aagaaccaat
     2641 gtaatgccaa caaatgtctt ctttatctgc aagtgctact gttttttctt ggaaaacgtc
     2701 tgcacgattt tcaccaaagt gacggatacc taaatcataa agctctgtga ttccagctac
     2761 atcaatcgtt tttgtaacag ctactaacgt tacatcttcc ggctgacgat tactttcttc
     2821 acaggcacgc tctatttgtg ccgttacttt ttgtaaatta gcttgttttg tcatttttta
     2881 tcaccttata taattcccga agtgctttat ttaaaacgct tcttgttata atcagatacc
     2941 cggtcacttg gcaatgcttc aaaagtggcc gggtgaaatt atgttataag tattatccgc
     3001 gacggttacg gttacggata aatgctggta catcaacatc tgaactattt tgttgtggtt
     3061 cagcttgttg ttcatgaact ggtgcatttg cttgctgtgg cgcattttgc gcgtaatcat
     3121 tttgttgttc gtcttgtaca gcataattag gacgatttac ttggatagat tgatttggac
     3181 ggcgatttgc ttgcgcttgt tgttgcgctt gcttttcttc atcaaaacct gttgcaataa
     3241 cagttacaat cagttcatct tttaattcgt cgttaataac agaaccgaaa atcatgttta
     3301 catcttcatc tgatgcactt gatacgattt ctgctgcttc ttgtacttca taaagactta
     3361 ggttagatcc acctgtaata ttcattagga caccttttgc tccgtcaacg gaagtttcaa
     3421 gaagtggaga agaaattgct tttttcgcag cttcagcagc acggttttca ccagttgcaa
     3481 taccgattcc cataagggca gaaccacgat tagtcataat tgttttcaca tcggcaaagt
     3541 ctaagttaat taaacctgga acggcaatca aatcagaaat accttgtaca ccttgacgta
     3601 aaacattatc tgcttcacgg aaagcttcaa gcattggcgt gtttttatcc acaatttgaa
     3661 gtagacggtc gttaggaata acaattaaag tatctaccgc ttctttcatt gcttctgttc
     3721 cagttaaggc ttgtttcgta cgttttggtc cttcaaaacc aaatggtcga gtaacaacac
     3781 ctacagttag ggcgcccatt tcttttgcga tttgagcgat aacaggtgca gcaccagttc
     3841 cagttccacc gcccattcca gcagttacga ataccatatc agagcctttt aaagcttctt
     3901 caatttgttc gcggctttct tctgcagctt ttttaccaat ttcaggtaca gctcccgcgc
     3961 ctaaaccacg tgttaatttt gtaccgattt gtaattttgt ttctgctttt gctaagttaa
     4021 gtgcttgagc gtctgtatta acggagataa attctactcc ttgaacacca tgctcaatca
     4081 tacggtttac agcgttgtta ccgccaccgc caacaccgat tactttaatt gttgccaaac
     4141 tttctgaact agtgtcaaat tctaacatat tattgcctcc tatttgccga tttatacgat
     4201 acgattttct tgctggacta tcagctattc gcttttattc aaaaaatgcg ccgaaaaaat
     4261 tcttcatttt cgttgatact ttttcgtcat ctgatttctt ttgttttggt ttaggttgct
     4321 tttgttttgg tgcttcatcg tcgtaacgag gttcgcttgc cgaactgctt acgtcgcgtc
     4381 cttctaattc agccatttga taagcatatt taattaagcc tactgcggtt gtaaaggaag
     4441 gttcccgaac accaatataa tcaggaatcg ctagtctaac atgcgctgct aaggtttttc
     4501 cagccaaatc aattgctcct ggaatagcca tcgaaccacc agttagtaca taacctcctg
     4561 gaagatgcgt tttaccgaca cgagtaagtt cttccactac taattggaaa atttcttcca
     4621 tacgcgcttc gataatatct gctacttcta cttgtgtaaa atgttgtttt tggtcactac
     4681 cgataacatc aatagcaaaa acttcatctg gagaagcatc atcataaaat gcatagccat
     4741 gatccaattt aacgcgatcg gcatttgcag tagaagtgtt tagtccaagt gataagtctt
     4801 tcgtgatatt atctccacca actggaatga caccagtata agttagtcgt ccttgttcaa
     4861 acacgctaac ggttgtagtt cctgctccaa cattcacgag tgctgttcca aattctttat
     4921 catcttctga taaggaaatg gatgcctctg caagtggttg taaagcaata tcagaaattt
     4981 caaggcctgc acgttccaca caacgtaatg tattatgtaa aattgttttt gaaccagtga
     5041 ttaatgtgcc ttccatttct agacgaacac caatcattcc acgtggatct gtaatcccag
     5101 ttaatccatc tacaacaaat tgatctggaa tagtgttaat aatttctctt tcaggagata
     5161 gaggaacaac ttgagcggca tccattacat tccagacatc ttcatctgta atttcacgat
     5221 tttcgctacc tactgccaca attcctcggc aagcttctaa atgcacttga ctcgatacta
     5281 ccccaactat tacttgagaa atttcaacgc caaccattct ttctgcttgt tcaattgcct
     5341 ttttaatgga ttctacagtc ttgtctatgt cgataataat tcctttttta atcccggaag
     5401 attcgacatt cccaacaccg ataatattga gtctatcgtc agccatttct gcgatgatta
     5461 ctttcacaga agctgttcca atgtctaaac ttacataaat ttcgctatca cccatttatc
     5521 ggcacctcct tttattctag tcatttaaca tgtatttatt tcattttttt ataccgagca
     5581 aaagccggtt ttttaacttt cttgaaaagc tatgaaattt ctttattttt atggcgtcag
     5641 tgtagaatga ttgcccattc tgcctaacat acaaaatcac ttatttacag tctacactaa
     5701 gaaagaaggt aataaaagca caaagaacat tttttggcaa attcttaaga tatttttttc
     5761 attttattca aaaagcgaac aagtgttggc atctcctgac ttgaggtcat cgttttgtta
     5821 cctttttgaa acatctgtta tctataaatt tgccaaaaat tggcgagaag aaaaaaatat
     5881 tattcatttg tttctttctt ctctttagct gcttcttcgg ctgccttttt ctcggcattc
     5941 tgttggtaat aactttggaa ataagaacct acttcaatat caataactcc tttttgtcct
     6001 ttagcaagtt gagcgacaat ggctggataa tgttgcattt tctcagcgaa agtactaata
     6061 tctgcggaaa cctgattccc gtcgttcata tataatttaa tatggttttt atcagtttta
     6121 gttggactat aaatcacttc cgagatagaa ctaacaacat cttttggtaa cttattaatt
     6181 tgtgctacca ttttctcaag tgttttaccg tttttaaagt tttgaaatag caaatcattt
     6241 ccaattggga attgtcttgg ttgatccgtt aacatgatgc cactttctag cacatcatag
     6301 tatttaccat cttgttgttg atagcctatc gttttaaatt cggtgatatt aatttgaaca
     6361 tcatttatcc cttctttaga aacggtagca tctttaataa gggtattttt tttgagggta
     6421 tcctcagttt ttccattact tatcccgatg acaaactcac caatttcgag tccactttct
     6481 tttcttactt cattctctgt aagttgctta ttgccactta cagcaatttt atctaattta
     6541 ctgagtgggg agaggaaata gagggtaatg gcgatcaaaa tcacaaaaat tccgattaaa
     6601 atggctaagt gtcttactaa tttttttttg cggtattttt tgagttctgg tatgcgattt
     6661 tcaattgaaa ttactcgttt attttcagcc attttattcg ctcctttctg cgatttattt
     6721 cataatgcta aggactgctt ctactaattt cgctgctgca tctgggcgcc ccatttgttt
     6781 agcacttagc ttcataccat ttaatttcgc ctcgtcattc aaaatcgaat caactgtcgc
     6841 cattaaatcg gtatttttta attctgcttc tgtaattacg atagctgcat tatttttttc
     6901 taaagcgcga gcgttatttt cttggtggtt tgctgtcacg tatggactag gtatcaaaat
     6961 acttggaacc cctagcgctg taagttctgc aagtgtagtc gctcctgctc ttgaaacaac
     7021 gagcgtcaca gcgtttaaaa tttttggcat atcataaata aatggttgaa cactaatatg
     7081 attacccaaa ttcaactccg ccaaagaatc ttttattctt tcatagtgta catcgcccgt
     7141 tacataaagt agctgaaaat cccgattatt ccattctggc aaaatagctt ctaccgcttc
     7201 attcacgccg cgagctcctc tactgcctcc aaaaacaagc acagttggct tccctgaaac
     7261 tagtccgtaa gtttccagtg caccttccga gtccacacct acaacttcag aagcacgtgg
     7321 attaccagtg aaaacgattt tttccgatgc gaaagaatca cttacttctt caaaacaaat
     7381 ggctacttta tctgtgtagc ggcttaaaaa tttattcgtt aatccagcaa cactattttg
     7441 ttcgtggatt aaagtaggaa ttttaagttt tgcggctgca taaacgactg gaccacaaac
     7501 ataaccacct gttccgataa cgacatccgg tttaaaatcg cgcaaaattt gtttactttt
     7561 tttcgcgccg ctcagaaaac gcattactgt tttaatattt tctaacgata atgaacgttt
     7621 gaaaccagta atttcaatag cttcaaacgg aatcccttca cgtttaacga ttccagcttc
     7681 taggcctttt tctgttccga tatataaaaa ttccgcttca ggatgaattt tttttaattc
     7741 tctgatgaga gcaagcgctg gataaacgtg tccaccagta ccgccaccac ttattgctac
     7801 tttcattttt ccacctcttc tattagctcg ccgattgcgt ccatataggc attcccgcga
     7861 acttcaaatg ttcggtattg atcccaactc gcacatgctg gtgaaagtaa gataatatct
     7921 cctggtgctg attcgcggta cgcaactgga acagctgcct cgacattatc cacgtaatgt
     7981 acgtcaatgc cagcgatttt cccaacgcgg ccaattttat ctgctgtttc gccaaagaca
     8041 attaacgctt ttacattttt gaaaaatggt agtaattcgt caaatgaatt accacggtcc
     8101 aacccaccag ccagtaacac gactggattt ttaaaccctt ttaatgcact ttgagttgct
     8161 agaatattcg ttgcttttga atcgttatag aatttacgac cttgccattc tacaacaaat
     8221 tgtgtccggt gctctacacc tttaaacgtt tctaatacgt gcatgatttc ttcatttgta
     8281 acacctaacg tttttgctac tgctacggaa gcaagcacat tttctaaatt atgctctcct
     8341 ggaagtaaaa tattgtcacg tgcgccaatc acttcatcgt tgaacataat attgccattt
     8401 tgcacgtagc ttccttgacc aaggcgttgt gtggttgaaa acggaataac ttgtgctttt
     8461 gtttgttttg ttaggttttt aagctcttct tgatcccaat taattactag gaaatcatct
     8521 gctgtttgat ttttttggat atgccatttt gcttgaacgt attcactacg gtctgtatgg
     8581 taatctaaat gcgcttcata aatattcgtg atgacggaaa tatgcggttt aaatgtttct
     8641 acgcccatta attggaacga agatagctcc atcgaaatgt attgatcact ggtcgcattt
     8701 tctgcaactg cggatgccgg aaaaccgatg tttcctgcga gtaaagaact attttctttg
     8761 tgcgcattta acatatggtg gatgattgtg gttgttgtcg ttttaccatt tgttcctgta
     8821 ataccaacaa ttggtgcttc agatatttgg taagctaatt cgacttccgt aatgactgga
     8881 attttgagtt ttaacgcttt ttcaatcatt gggttgttgt acggaattcc aggatttttt
     8941 atgacaagtt caaatccttc atctaaaagt tcaattgggt gcgaaccgca aataacttta
     9001 ataccttgct caagtaaacc ttgtgcttct ggattctcgc taaaaggttt ttgatcatta
     9061 acagttacaa atgctcccag tttgtgcata attgttgccg cgctaacacc acttcttgca
     9121 agacccaaga caagtacttt tttgtgatgg tacatttcaa tttttttcat ttcctttggt
     9181 tcccccattt atatcaaaat tggcggtcga atttatgatt ttcacaaaaa cgacggaaag
     9241 cgccaaccag attctgtaaa aaaacagcta actagagacg cttttgccgt aaaaagatta
     9301 cggcgcatta tttaaaaaat gactacacag acagaaataa ttgctccgat taacccgatt
     9361 ccccagaacg ttaaaacaac acgccattcg gaccagccac caagttcaaa gtgatgatga
     9421 attggtgtca tacggaagat tcgttttcct ccagttgcct taaaataaaa tacttgcaat
     9481 ataacagatg ctgtttcaat aacgaaaata attccgatta agagtaacag ccattcttga
     9541 tgtactaaaa tagaaattgc ggcgatactt ccaccgagtg caagcgaacc agtatctccc
     9601 atgaagattt tcgctggatt tttattaaat agtagaaatc caagcatacc gcccacaatc
     9661 gcaaaacaga aaatcgcgac atccatttgt tcttggtaaa atgcaatgac accaaaagca
     9721 gaaaaagcaa tgacagaaag gccagagaca agaccatcta aaccatctgt taaattaact
     9781 gcattagaga aaccaactaa ccagaacaaa ataaagataa caaagaacca accaagatcc
     9841 acttctatat ttgtaaacgg aatattaagc gtctcagcaa aaccatttaa atgatatacc
     9901 agatagaata aaatcgaaat tgccacttga cctaaaaact tctgctttga agtaaggcct
     9961 agattacgtt tttgaactac tttgatatag tcatctagga aacctaatgc gccaaatagt
    10021 gccagcgcga tgaatagcag ccacgtagct gcactaactt caccactgat gaacgaaaag
    10081 atcaagaaac taataagcat tgcagtaatg aaaacaactg cccccattgt cggtgtccct
    10141 gatttctttt catgcatttt cggaccttca tctctaatac tttggccgaa ttttaatttc
    10201 accaagaatg gtataaatag tggtacacct atcaccgtaa tgataaaagc aactgcaaat
    10261 gttgatacta acatgtataa agacacaata aattctcccc aatctgtttg tcaaagcact
    10321 tcacttcata ttttatgcga gtccaagttt tttttcaata gctattcggg cttctactcg
    10381 gtcatcaaaa tcaataacct cgtcaccaat cacttgataa tcttcatgac cttttccagc
    10441 aatcagaata acatcccctg cttctgcttc atttactgca aaacgaatcg catctcggcg
    10501 gttttcgtga accacataag aatcactata tggaacacct tgaatcatat cttcaataat
    10561 cgcacgcgga ttttcactcc gcggattatc tgatgtaaaa ataggatttg ttgcataatc
    10621 tacagcgatt tttgccattt gtggacgttt tcctttatca cggtccccgc cacaaccaac
    10681 aacgacaaaa acgcgttttt ctgcaaactc agcaattgtt tctaatacat ttagcaagcc
    10741 gtctggagta tgggcgtaat caactataac agggaactct tgccctgcat gcacaagttc
    10801 aaaacggcct ttgacacccg gtatgctttc cactgtttta attgcttttt ccatagggat
    10861 atgtagcgca aagctagttg caatcgcagc caatacgtta taaacactaa agtttccaat
    10921 catttttatt ttcaatgtaa aattaccaat tggtgtccgt aaatcaaatg tagaaccatg
    10981 gctagtaatt ctgatattac ttgctttgaa gtcagcttgt tgttttatcc caaaagtgat
    11041 tacatgagca gctgttgctt tttgcatacg cacgctttcc tcgtcatccg cgtttaacac
    11101 agcaattttt gggttacttg tatggtagct gttgcctagt tgcgcaaaca ataagctttt
    11161 tgcattggcg tattcttcca ttgtatgatg ataatccaaa tgatcttgag acaaattcat
    11221 aaatacagca acatcgtaat ctgaaccata tacgcgacct tgaacgagtg catgcgagga
    11281 tacttccatc acagctgtgc tcactccact aagtaacatg tcccggaatg tttcttgtaa
    11341 agtgaggcta tctggcgttg tattttttgt ttctaaaatt tggtcgccaa ttttgcgata
    11401 catcgtgcca atcaaacctg tttgctcgcc attttcgcgc acgatttgtt ccactaagtg
    11461 gctcacggtc gtcttcccat ttgtcccagt aatcccaacg agctttaatg cttgggttgg
    11521 agatccataa aagtaatcgg ctaacatcgc catagcacgt tttgaatctc ttacataaat
    11581 gacaggaata gatacatcta attgtttttc cgcgataatt gctaccgctc ctagttctac
    11641 tgcacgtgat gcaaattgat gtccatccac caattctcca tctatacaaa taaacaacgt
    11701 ccctggtttt acttttctac tatcttgggc gatatggcta atttcaattg tttcacttgc
    11761 ctcgccagta aaaaccggga tagcttgcat tagttcattt aacttcattc ttgccatctc
    11821 ctcaaactta ttctttctgt tatttttgct aaaaccaaaa agaatccttt tctatcttag
    11881 caaaaacaac aaactatatc taccacgaca aaagacacag attgcattta aagttagaag
    11941 tatgccactt tgtaaagctg acatacttct atcttcctat tattaattga gcaaatcacc
    12001 gataccggca ttctcttgga tgtcagttgc ttttttattt ttttctgctg tatcttgatc
    12061 gtgattttga ttaaatgcac ttatttcttc tggtggcgcg agggttattt tcattttcgt
    12121 ttcactatta attacgctac ccgcagatac actttggctc ttcacgtaac catttccact
    12181 aaactcaaac ggaataccag ttatttcaga aacttttagc gcatcgtctt tcgaccaagt
    12241 taccatgtca ggggcagtca tgtcaccatc tgtcattaaa ataacttttt gaccttgcat
    12301 gatttcggcg ttcgcttgcg gaagttgttg gacaattttt ttgccgttgc cgactataat
    12361 tggttctaat cctttatctt tcactatttt tttagcttca tctattgttt tccctgctaa
    12421 gactggtact ttttcggaag ctagtttttc tgcatcgcct ggtttgatgt tcatatattg
    12481 tagactgttt ttcattacag gattaaaaac ttctgagact gcttctccgc cagtctgact
    12541 gccggacaat tgtggttgtt gcattgtcac atagattact aactccggat tatccgctgg
    12601 tgccattcct aagaaagaga atatataatt atctgctcca gtcatatact taccagtttt
    12661 cggatctgga atttgtgatg taccggtttt accagctaca tcgtatcccg gaatcgcata
    12721 taatttacca gtaccatgtt cgccgctaat aacgtttttt aattcgtcac gcgttttctt
    12781 cgctgtttct gcactaattg gttttccagc aatttttgtt ttagtatcgg tttcttcgcc
    12841 tgtgtttgga tctttgacac ttgaaacaac atatggctct ttcatcgtgc catcacttgc
    12901 gatagccgaa gcagcttgaa tcatttgcat cattgaaacg gttgttcctt ggccgaaaac
    12961 ggttgttact ttctcaattg gatagttata taaaattttc ccgcttgttt cattaggtaa
    13021 agcaatacct gttttcttac caaaaccaaa tttgtctaaa tatgttttaa acgtatcggt
    13081 ccccattttg tttaaaagtt tggcaaatgc aacgttacta gagcgttcta ccccttcacg
    13141 gtacgtaata gacccccaac cattaccgtt attatggtca tgaattgcga tatctcctac
    13201 tttgtatgaa cccgattgat aatattcatt ggcattatat gtgttcgtat caatagcaga
    13261 tgcaagagaa ataattttca ttaccgaacc tggctcataa gcatactcaa caggtaaatc
    13321 ttgccaaata ctggagctgt ttccagtaat agtagatcga tcagcagggt tgaaagaagg
    13381 acgttgacta atagccaaaa tttcacctgt tttcggatca gctacaactg ccatcatgtt
    13441 tttaggtttg tactttgcat ccacagttgt catcgtatct tctaaaaagg tttgaatttt
    13501 tttatctagc gttagcgtaa tatctttgcc gtcttttgct tccgttactt tgtttttaga
    13561 gttaggcaaa atatagccca ttctgtctgt actgtaatca attttgccat tcttgcctgt
    13621 caaaatatca ttgtaacggg attcaatacc cattttacct tctaaaactg tagtattctt
    13681 ttcttcttct tgttgggcga aaccaattaa ttgtgttgca aacgttccat taggatagaa
    13741 acgttctgat tgacgagtaa attcaatacc tggtaaattt tctttgtcaa tttttgcttt
    13801 tgtttctgta gaaatatttt taccggcagc gccgaattcg acttggtatt ttcctttttc
    13861 attgagttta tctagaatat cagattcatc cataggaata tacttggcaa gaattcgagc
    13921 cgttttttct tcgtcaacaa cacgcattgg atttttcgtt gttttggaaa gtttatcgct
    13981 aactactgct gcaaccgtgt aagaagccgt atcctccgct agcacttctc ctttacgatc
    14041 taaaatggag ccacgctttg cttcgagaac actgcttttc aaatgttgtt tagatgcttt
    14101 tgctgcaaga ggtaccccat ttgcttctcc cgtaatttgc aaataaagaa aacggccaga
    14161 aaccaagaga aagagaattg tgaaaaagat aaaaagcaca agagctcccc ttctcatgtt
    14221 acctatacgc cgtttcattg accatctacc actttcacat tatcgccatc aagttttagc
    14281 cctttttctt tagcgatttt caaaatacgt tcatatctcc ctaaatcttt tacttctact
    14341 tttaagtctt catttgattt ttgttgttcg agaattttgg tttcttttgt ttgaatttct
    14401 tggttcactg tgtaaatttg cgcttgtacg ctaattatac gaaaagcaac aactaaaaca
    14461 atcgcaagcg caatcgtgat gattactttt tctccaagtg tcatttgacc acgttttagg
    14521 atttgttttt taggttgttc cgcttctcta tgtactctat ttggctcgag atttgattta
    14581 taggcgacat tgctcacatt ttttcaactc ctgctatttg ataatttttt caatcacgcg
    14641 taattttgct gaacgcgctc ggttattttg ttccagttct tcttcacttg gtacgattgg
    14701 ttttcttgtc gcaagtttga aatctggttt atattcatct ggaatgacag gaagacctgg
    14761 tggtaaatct ggtccttttg tcgcttcttg gaataagtgt tttgtaatgc ggtcttctaa
    14821 agaatgaaac gtaattacgc taattctgcc gcctggtttt aataaagtta aggctttttc
    14881 aagcgaatct tctactgcac cgagttcgtc gttaacggca attcggatgg cttgaaaagt
    14941 gcgtttccct ggatgtccgc cttttcttct tgctggagcc gggatagctg ttttgataat
    15001 atctactagt tcgcctgttg tttcaattgg ctttacttca cgacgacgtt cgatttcacg
    15061 agcaatttgt ttcgaaaatt tttcttcgcc atattggaaa aagatacgga ttaaatcttg
    15121 ataagaccat tcgttaacaa ctatttttgc tgtcaattct tgttcttgat ccattcgcat
    15181 atccagtgca gcgtcttggt gataactaaa accacgttct ctctcgtcta gttgtgggga
    15241 tgaaacgcct aaatcataca aaatcccatc aaccgcttcg ataccacgct catttaatgc
    15301 ttctttcata tcgcgaaaat tggctttaat aaaagtcact ttatcgctat aatctgctag
    15361 tttaattttt gcattattaa ttgctgtttg atcttggtca aatgcaaata aatgcccttt
    15421 ttcattaagc ttatttagta aatactcgga gtgacctgcg ccgccaagtg ttgcatcgac
    15481 atagattccg tctggtttta cttcaagcat atcgactgtt tcatgtagta atacggtttc
    15541 gtgtttaaac atgcgtttac ccccttaaat atcaaagcca atcatatttt cggctaaatc
    15601 agcaaaagat tcttctgcct cgttaaagac atcatcccac tctgatttac tccaaatttc
    15661 aatacgacta gaaaccccga taataactgt ttctttttcc aaatccgcat actgtagtaa
    15721 gttggatgga atattaatcc ggccttgttt gtctagttca cattcagacg caccggaaaa
    15781 gaagaaacgt gtaaaggaac gagcatcttt cttagtaagt ggtaaggttt ggagcttttc
    15841 ttcaagcttt ttccattcct cttgtggata agcaaataaa cacttatcaa gtcctcgggt
    15901 tataacaaaa ttatccccca aaagctcacg gaatttagct ggcacaatta atctgccctt
    15961 tatatcgatg ttgtgttgat attctcccat gaacattaga cttcacccac tttcatacat
    16021 accactttac cacatctccc cacttcgcac caccaaaaac ctaaaaaagt gtaaaaaaaa
    16081 atcatcccag ccaaagcaca gaatgatcaa tcccttattt aaagccattt tcatctaatt
    16141 caattcttaa aaaacaatgt ggggcttggt ggagggattc cccactttga accaacattt
    16201 attttaccaa cactttttcc caaccagatt ttagtgccac tgctgagaac actatactta
    16261 aaacaccaag cgtaatcgta aaagctccca tgccatattt accaataaat ggtgcaaata
    16321 ctaaacttac agaaccaatc attttaccaa tttgaaaaat aataccatta aatgccatgt
    16381 aggccccacg tctttcatca tctactattg ccgctaagac cgtttgacgt gttggtacat
    16441 agagtaattc accaattgag agcaccatcg tcgccaaaag taaaactgtt agattatttg
    16501 cgaaagcaca aactgcaaat ccaagcgcaa acaaagtaaa ccctacatac ataataggtt
    16561 gctgcgccct tttagtcaca aatctcgcaa ttggtacggt aaaaagtaca ataaataaag
    16621 tattcacagc ggttaacaca ctcactattt gtactccatt gagagaaata tttccaagtg
    16681 gccccaaatg tacaagtagc gctttcacat cttctgctaa acgaaccgaa atgtagttgc
    16741 tccgttgaaa ctcgatcgac atgatagcaa ttccaccaat agtatataga agaaaacgat
    16801 aatcatgtaa tacttgtcca taatttttaa gcattcccat tagtccatat gaccctttgt
    16861 gcggcatttc tttttgctgc aacgtctcgg aaattaagct tatagtaagc catgccgtaa
    16921 caaatgacat gataaaaaga acaactaata gaggaaacag ataatctaca aaaaaccaac
    16981 cccccaccat aattccaatc atgatcgata aattattcgc ccaataactg accgaataca
    17041 taaatgaacg gttctctggg gtacttacat caattaacat tgcttctcca gctggattaa
    17101 tcaatccctg agctacccca ataataagta acatgacaaa agttatccac ggagaatgaa
    17161 acatggggga attgcatagt accatcccga gaaacgcaaa cactttaagc agttctccgg
    17221 tgaccattaa ttttttacgt ccaataatat ccgctagatg tccaccgtac atgccagcaa
    17281 gaaattgtgc taatacatta atcatcaaga gaaagccggc gacactacta ttaatttccc
    17341 ttgaaaaata aattgccata aaaggaaaaa tcatcgaacc aattacttta ctcaaaaact
    17401 gaattaatat ccgcgcacga atatttgggt gcaactctct aaacatgaca tcccctccat
    17461 ttgcaatttt tctgacttct ctgctagtat aaaagggata cataaattta aaaagggtat
    17521 tcattttcat atattgtccc cttttaggac ggagctgttg ttatggataa agattatttc
    17581 actatgcgcg cgcatttata caatataact accgatttag aagtgtcttt caaattaaat
    17641 gatgtggcaa atatttggtt ttgtacgact aaaaatgcca agcgtaaact gcaacaatat
    17701 caggcgaaaa aaatgcttac ttatcttcct gggctaggcc gaggaaatgt ttcaaggatt
    17761 atttttccta aacagttaga actagaggtt cttgacgttt tggaacaaag tttggctgaa
    17821 gatgcattta gcgatatttt atttttgcta caattgccta tccctaaaag ctggtttaca
    17881 agtatctcta cggaaattca acaaatattc ggtttgcaag taacagaaaa tcaacaagaa
    17941 gttctgcgct ccatcgttcg tcgcaagctc actaccttag acccacttca aacttctgta
    18001 tctatggaag catttctcat cacccaaatt agtgactctc tcgtcaaata tgatgaagag
    18061 aaaaagaaaa ttatacctca tattgcacac cactggaaag tatctgatga ttttacggaa
    18121 tggacatttt atttacgaaa aagtgtttta tttcatcacg gacgcatgct ggatagcgag
    18181 gatgtaaagc acaccttgat gcgttctatg caaacagaat cggtttcttt ctggcaatta
    18241 caggatattc aatccatcca ctgccctaat aaattcacga tctccattca gctaaaaaaa
    18301 acggaccctt ttttcattcg ttatttatgc acagcgaata tggctatttt accgcgagat
    18361 attatttttg atgaatatac atggatttct actggtccct ttcgagttgc agagcggaat
    18421 gacgagcgct tggtcttaga agcctttgat ggatattttc tcgagagacc gattcttgat
    18481 cgagtagaat tttggaccgc ccaaactgga aacaatttaa aaaccattcc aatgcaattc
    18541 acttccgttg attacgagga aaatctcgcc tatgtagaac gtcgtaaacc tggtgttggt
    18601 gttaatttta tttgtttcaa tacgcaccga aatggcgccc cacaacaccc ggcatttcga
    18661 gaggcaatct accatctcat tgattgtcaa aaagcaagtg aacaacattt cgaaaactat
    18721 gggacagtcg catctaacta ttatcctgaa aaatcccttc cacctaaaaa acatcctgag
    18781 aaaatcgcta ctttattaaa aaaagcaaac taccaaggcg aaaaagttat ttttggaact
    18841 acccaacatc ctaccgctgt aaaagagtca aaatggattc aagagcaagc tgtcgaattc
    18901 ggaattaact tagaaagaaa aatcattacg catcaggaag cttcctattc caacgttcca
    18961 gcaaaagaaa ccgacttcat gatgatggga gaaatcccag cctcagatga cgaaatggct
    19021 tatttagatt ttttaaataa cccctatctg ttgccacaac aacttttcaa tcaagcaatt
    19081 atcaaagaac ttacggaaaa gctcgatgca tttaaaacag aaaaagacgc ctccaaaaga
    19141 gacgccttac aaacgagcat tgatagctgg ttaacagaaa atcattattt aatttacttg
    19201 catcatccgg aaaaaagtca atcgcttcat tcaatgataa aaggaattgc agaaaatcct
    19261 tatggttatt ttgatttaag caaagtgtgg attgaaataa gcccgcttaa aacattaaaa
    19321 ccagactata gacaatccca tagaggtaaa gcgccacata caataacgca aaaatgaaga
    19381 agcataggcg ccagtaacca cgtaggattt tgcggaactg aatctcgcct tctttctttg
    19441 cagccgtgac aacaattaca
//
LOCUS       DASDYO010000049        19040 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.049, whole genome shotgun sequence.
ACCESSION   DASDYO010000049 DASDYO010000000
VERSION     DASDYO010000049.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 19040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19040
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.049"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..977)
                     /gene="mltG"
                     /locus_tag="U0290_001424"
     CDS             complement(<1..977)
                     /gene="mltG"
                     /locus_tag="U0290_001424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endolytic transglycosylase MltG"
                     /protein_id="HEM2301469.1"
                     /translation="MKNTKGKKITIIISVIILILVIATFSGYYYVKSQLEPKDEASKE
                     KITVEIPAGSSISDISTILEDKKVINNASIFSFYVKYNNDTNLKAGNYEFSPSMNTDQ
                     IVKKMQEGKTVAPAKLVIPEGYTLDQIADRIVAYQPKLKKADVLKTMDDPEFVASMIK
                     AYPDTVTNDVLNKSIKHPLEGYLYPATYTFKGTDVSAEQIITEMVKATDVNIAKYRDE
                     LTKQKMSVHKFLTMSSIIEKEATENVDRKMIASVFYNRLAKDMRLQTDPTVLYALGEH
                     KSKTTYKDLEVDSPYNTYKNNGLPPGPISNSGDSSMEAALYPEKSDYLY"
     gene            1180..1806
                     /locus_tag="U0290_001425"
     CDS             1180..1806
                     /locus_tag="U0290_001425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465025.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DedA family protein"
                     /protein_id="HEM2301470.1"
                     /translation="MLHTLIQSLQDFTMWLVDSLGHWGIFLGMLIESVCIPLPSEVIM
                     LFGGFMAEAGKLNFWLVVFAGIAGNFVGSLIAYYIGKFGGRALVLKFGKYIFLNVKHL
                     DKAELWFGRYGARAVFFGRVLPVIRTFISLPAGIAKMNVWKFVIYTILGCIPWNIFLT
                     WLGYSLGSNWSVVEKYTRPISYLMLALVIAIVVYLAYKVWNKRARNAK"
     gene            complement(1852..2154)
                     /locus_tag="U0290_001426"
     CDS             complement(1852..2154)
                     /locus_tag="U0290_001426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1292 domain-containing protein"
                     /protein_id="HEM2301471.1"
                     /translation="MAEEHNHNHEEENIIWITNEEGKEEAYEILFDFDSEDFDKSYVL
                     YFPAGKGEDEEIEILASSYIQDEEGKQGQLKPVETDEEWDMIEEILATFLADEDEE"
     gene            complement(2170..2586)
                     /gene="ruvX"
                     /locus_tag="U0290_001427"
     CDS             complement(2170..2586)
                     /gene="ruvX"
                     /locus_tag="U0290_001427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Holliday junction resolvase RuvX"
                     /protein_id="HEM2301472.1"
                     /translation="MRIMGLDVGSKTVGVAISDPLGWTAQGVETIQIDENRKQFGYDR
                     VKELVLEYEVEKVVVGLPKNMNNTIGPRAESSKIYAEVLESRIGLPVVLWDERLTTSA
                     AERTLIEADVSRKKRKEVIDKLAAVMILQSYLDTTN"
     gene            complement(2583..2855)
                     /locus_tag="U0290_001428"
     CDS             complement(2583..2855)
                     /locus_tag="U0290_001428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IreB family regulatory phosphoprotein"
                     /protein_id="HEM2301473.1"
                     /translation="MDSKDQTMFYNFGDDSIEEDVKKLMKQVYVALEEKGYNPVNQIV
                     GYLLSGDPAYIPRHKDARSMIRRLERDEIIEELVKAYLKNNEIGEK"
     gene            complement(2947..5586)
                     /gene="alaS"
                     /locus_tag="U0290_001429"
     CDS             complement(2947..5586)
                     /gene="alaS"
                     /locus_tag="U0290_001429"
                     /EC_number="6.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alanine--tRNA ligase"
                     /protein_id="HEM2301474.1"
                     /translation="MKQLSSAEVRQLFLDFFKEKGHTIEPSAPLVPNNDPTILWINSG
                     VATMKKYFDGSVIPDNPRMANAQKSIRTNDIENVGKTARHHTFFEMLGNFSIGDYFKE
                     GAIVFAWEFLTSPKWIGFDPDKLYVTVYPEDEEAKTLWREKIGLSDDHIVEIEDNFWD
                     IGIGPSGPDSEIFYDRGPAFGDDASDPELYPGGENERYLEIWNLVFSQFNHNPDGTYT
                     PLPKQNIDTGMGLERMVSIIQDAPTNFETDLFMPIIREVEQIAGVKYGHSQENDVAFK
                     VIADHIRTVAFAIGDGALPSNEGRGYILRRLLRRAVRYAKVLTINEPFMYKLVPVVGK
                     IMNSFYPEVENQTDFIQKVIRTEEERFHETLNEGLAILETILKTAKETNEQIIKGADI
                     FKLYDTFGFPVELTEEYAEDHGLKVDHAGFEAEMKEQRDRARSARADVKSMQVQGELL
                     ANLTEKSAFVGYNSTEHVSEILYLIQDDTLVEEVAAGSEAQVIFKETPFYAESGGQVA
                     DKGTIESETGLAYVEDVQKAPNKQNLHRISVKEGVLKTGDTVKLAVDKVKRRETIKNH
                     TATHLLHRALKDTLGEHVNQAGSLVSPDRLRFDFSHFGQITEEELTKMEEIVNEKIWE
                     QINVVIEEMPIAEAKELGAMALFGEKYGDIVRVVQVGKYSIELCGGVHVRNTADIGLF
                     KIVSETGIGAGTRRIEAVTGKEAYRFVTEQENTLKQAASLLKTTTKETPQKVEQLQAD
                     LREVKRENESLLSKLASAASADIFESPEEIGGVKVIAKQVNAKDMNQLRQFVDNWKDK
                     KIGGILVLGAVQGDKVNLISAVSEEAIKAGYHAGKLLKEVATRCGGNGGGRPDMAQAG
                     GKNPAELGTALDYVSTWVKEQQA"
     gene            complement(5893..6588)
                     /locus_tag="U0290_001430"
     CDS             complement(5893..6588)
                     /locus_tag="U0290_001430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301475.1"
                     /translation="MTKVLTFENISYWYKTKEESILSDINYDFEAGVFYTVVGSSGSG
                     KTTFLSLAGGLDTQKEGDIFYKGSSLKSIGLQQFRNKYVSIVFQSYNLLTYMTALQNV
                     TTAMEITHVNQPDKKAFALSMLEKVGITEDMARQKVLTLSGGQQQRVSIARALCCETE
                     LIVADEPTGNLDERTSKEVVTLFQDLAHKEGKCVIMVTHDPEIAKVSDVKLTLKNGSF
                     VEKKQSTNSLINS"
     gene            complement(6597..8096)
                     /locus_tag="U0290_001431"
     CDS             complement(6597..8096)
                     /locus_tag="U0290_001431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301476.1"
                     /translation="MNFFKRAWLSMKARKGRSVLQLIIFTVVCVLILSGFTIQSAADK
                     ASELAREQLGGTVTLTVDREKQMQTMRDEASSSDSSSTESKPQFQSSPIDVSDANDLA
                     KLNHVASYNYYSSTQALASGFDPIESSGDTSSSSDESSTTTETQGPGGGQGGPQMVDA
                     DLSISGLLDSATSTDFEAGTSELTSGVAITSADKDKNVAMVEENLAEENDWKVGDSFT
                     VTSSDGNTKVTLKIVGIYKTTDSGSDMAQNFSFLNPYNKVYVPYTVANTIKGSDYKNT
                     VDSAVYTMDDAANISAFEKEAKKVDSIDWDTFKLDANDTLYQQMIGPINSVASFSKNV
                     VYIVSIAGALILGLLVMMQVRDRKYEMGVLLAIGEKRGKLIAQFFVEILIVALVSFGL
                     AAASSHYVAQLAGNQLLAQQNSSTTETTSSTENRGPGGGQGGPGGFGESVSNLTKNTE
                     QIKELDIQVTLEDMLKMGGIGIGIAFISVLLPAALVLRMNPKTILTKQE"
     gene            8263..8949
                     /locus_tag="U0290_001432"
     CDS             8263..8949
                     /locus_tag="U0290_001432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2301477.1"
                     /translation="MKLLMIEDNVSVCEMIEMFFMKEEIDATFVHDGKQGYEAFFKDE
                     YDIAIIDLMLPNMDGMTICRKIREVSDVPIIILTAKESESDQVLGLEMGADDYVTKPF
                     SPLTLMARIKAVTRRKNSATSTENNEDILETTYFKISKRTREIFYQGELLDALTPKEF
                     DLLYFLMQHPRQVFSREQLLEQVWGYQFYGDERTVDVHIKRLRQKIATETKPFLHTVW
                     GVGYKFDETE"
     gene            8946..10385
                     /locus_tag="U0290_001433"
     CDS             8946..10385
                     /locus_tag="U0290_001433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing histidine kinase"
                     /protein_id="HEM2301478.1"
                     /translation="MKRMKFKYAYQLFFTQFIILLIACIMIGVLVSHSLKDYFYQSQV
                     DDLTSYGQTISRDIRYSPQDATMQVLNTYQRILDVKKIHYTIKNANDETIYPTQMNQP
                     LPKDFSISSDDKKKLESGETVSKKIDNRFNKEMTIVYVPIMNGDKFVGSIVLNSPISG
                     TEQVIGTINRYMFYTILLSITVALILSAILSKLQVNRINKLRAATKDVIQGNYKARLK
                     ENNFDEIGALAIDFNKMTQTLETSQEEIERQEKRRRQFIADVSHEMRTPLTTISGLTE
                     GLVNDIIPKSETDRCIALIDTEARRLTKLVNENLDYEKIRSNKIKLQKTRFNGKEFLE
                     LIKEQLDYVSSEKGNTITVSIDKDMAIYADYDRLTQVFINIVKNSVQFTENGQITLTG
                     TQDYKESVLTITDTGIGMNTEELEQIWERFYKADMSRTNTAFGESGIGLSIVKQLIEY
                     HDGSITVTSEPNKGTSFTIRLPFFQDNEQ"
     gene            complement(10427..12823)
                     /locus_tag="U0290_001434"
     CDS             complement(10427..12823)
                     /locus_tag="U0290_001434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RecD-like DNA helicase"
                     /protein_id="HEM2301479.1"
                     /translation="MAEQESLALFNDTPEELFMKGTMLSTIFYNAENLFSVVRILVKE
                     TNADWDEKDIIVTGFFPALHEQEVYTFYGKMQEHAKFGQQFKADRFRKEMPQSRAGLI
                     NYLSGELFKGIGKVTAENIVDTIGDDAITKILSDPSLLNTVPKLPSGAAESLLASLRE
                     NQGLEHVMVGLNEYGFGPQLSMKIFQAYKQNAIEVLENNPYKLIEDIKGIGFQRADEL
                     GRKLGLGGNHPERLRAGILFMLDSVCMQQGHVYMEQEVLLGEVTYLLEESEGIRIDQN
                     ILVAQVEKLAEEQKIITENTRVYMPSLYYSESGFAYHVKRMLKQTEYQEQFPQSEFLL
                     ALGELEERIGVHYGDSQRQALEQALMSPMLVLTGGPGTGKTTVIKGIVELYAELNGVS
                     LDPHAYKDGATFPVLLAAPTGRAAKRMSESTGLPAMTIHRLLGMNGQEQMDDDAERLI
                     DGRLLIVDEMSMVDIWLANQLFRALPAHMQVVLVGDQDQLPSVGPGQVLKDILQSEQI
                     PTVALSDIYRQKDGSSIIEMAHYIKEGMLPADFTKNSADRSFFHCTVNQIGDVVEQVV
                     KNAKNKGFRAKDIQVLAPMYRGPAGIDILNKKLQEIFNPNDTGRRKEVQFGDIKYRVH
                     DKVLQLINQPEKNVFNGDIGEIVSIIYAKENTEKQDLIVVQFDQTEVSYYRQEFNQLT
                     HAYCCSIHKAQGSEFPIVIMPIVRSYYRMLRRDLIYTGVTRSKQFLILCGEEEAFRMG
                     IERIDENKRNTTLSERLMSEDVLLEQMTNKRILTAENITEIDPMIGMEGITPEQFMAG
                     "
     gene            complement(12851..13489)
                     /locus_tag="U0290_001435"
     CDS             complement(12851..13489)
                     /locus_tag="U0290_001435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEM2301480.1"
                     /translation="MQEGNLEEAVKLFTEVIEEHPSDPVGYINFGNVLLSMDDFERAE
                     LFFKRALELDDTVPAAYYSLGNLYYELERYQEAADSFQNATKQGMENGDLFFMLGMSF
                     VQMEELTLAMPYLLRSVELNPEDGEALFQYGIVLARSGFYEDAINMLERVLLVKPEDP
                     DALYNIGAAYLAWQGDIVLAKNYFERAIATGASHELAENALNAIQDLENEVE"
     gene            complement(13530..14270)
                     /locus_tag="U0290_001436"
     CDS             complement(13530..14270)
                     /locus_tag="U0290_001436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2301481.1"
                     /translation="MKKIAIFGSAIVLFCLLIWGYFYFNSEPSTTAENAANSTKAVDV
                     LEENDILVFTPRKLDADMSVILYPGAFVDALSYAPLANKLASSGYKTYIVEMPLNLAV
                     FGKNRAADIIDEAPDEKFVIGGHSLGGVMSSRFAHDNESEIEGAFFLASYPDKKGSLK
                     NASFPALSVTATKDEVLNQDSYNKNKKYLPKDTTFVSIKGGNHAQFGSYGEQHGDGKA
                     TISGPEQTDQVANALITWLNTSVKNQER"
     gene            complement(14389..15504)
                     /gene="mnmA"
                     /locus_tag="U0290_001437"
     CDS             complement(14389..15504)
                     /gene="mnmA"
                     /locus_tag="U0290_001437"
                     /EC_number="2.8.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA 2-thiouridine(34) synthase MnmA"
                     /protein_id="HEM2301482.1"
                     /translation="MSTNNSDIRVVVGMSGGVDSSVTAHILKEQGYDVIGIFMKNWDD
                     TDEFGVCTATEDYDDVIRVANQIGIPYYAVNFEKEYWDKVFTYFLDEYKLGRTPNPDV
                     MCNKEIKFKAFLEHAESLGADYVATGHYAQVKKVGDEIELLRGVDNNKDQTYFLNQLS
                     QDQLKKVMFPLGGMEKTEVREIAKKAGLATANKKDSTGICFIGERNFKQFLSEYLPAQ
                     PGEMRTLNGEVLGKHDGLMYYTIGQRHGLGIGGDGEPWFVVGKDLKENVLFVEQGFHH
                     ETLYSDSLIATDISFTTNAEKPKTIECTAKFRYRQTDTKVTVHLREDGTAEVVFADPV
                     RAITPGQAVVFYDGDICLGGGTIDTVWKNGAKLDYVG"
     gene            complement(15523..16671)
                     /locus_tag="U0290_001438"
     CDS             complement(15523..16671)
                     /locus_tag="U0290_001438"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM2301483.1"
                     /translation="MENRIYLDHAATSPIHPEVIQTMLGAITNTYGNPSSIHYAGREA
                     RKALDEARHTIADSIHAIEKEIIFTSGGTEGDNLAIIGAALAQQESGKHIITSQIEHH
                     AVLKTCEYLETQGFEVTYLPVDEHGIVSIESLQEALRPDTILVSIMYGNNEIGTIQPI
                     AEIGAVLRNHQAIFHTDAVQAYGLLNINVTELGVDLLTTSSHKINGPRGVGFLYVKNG
                     TRLIYQMHGGEQERKRRAGTENLAGICGFSAASSIMMNERELKNEEYISFKKRMAEIW
                     RSADLDFEVNGLEANTLPHVFSVRFPGVSIEQLLMNLDMDGIAVSSGSACTAGTVDPS
                     HVLVALFGENHPAIQETVRISFGLGNHLEEVEMAATKISEVVTRLMKI"
     gene            complement(16786..16981)
                     /gene="ssrS"
                     /locus_tag="U0290_001439"
     ncRNA           complement(16786..16981)
                     /ncRNA_class="other"
                     /gene="ssrS"
                     /locus_tag="U0290_001439"
                     /product="6S RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00013"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00013"
     gene            complement(17052..18335)
                     /locus_tag="U0290_001440"
     CDS             complement(17052..18335)
                     /locus_tag="U0290_001440"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="replication-associated recombination protein A"
                     /protein_id="HEM2301484.1"
                     /translation="MAIQPLAYRMRPKALDEIVGQTHLVGKDKIIYRMVKAKQLSSMI
                     LYGPPGIGKTSIASAIAGSTKYAFRTLNAVTNNKKDMEVVAAEAKMSGTVILLLDEVH
                     RLDKAKQDFLLPLLESGAIILIGATTSNPYIAINPAIRSRTQIFELKPLTVEDIMITM
                     DRALSDKERGLGNYDVEIDEVAKKHFATASNGDVRSALNALELAVISSEPNEDGVIHI
                     TLDVAEECLQKKSLAHDKDGDAHYDVLSAFQKSVRGSDVNAALHYMGRLIEAGDLVSI
                     SRRMLVMAYEDIGLASPQAGAHTLAAIQTAEKVGFPEARIPLANAVIELCLSPKSNSA
                     IMAIDAALADIRQGKSGEVPDHLRDGHYSGAEKLGRAIDYKYPHNYDNAWVDQQYLPD
                     RLKNKLYYAPKFTSKFEQTIAGVYQKINENKAKKE"
     gene            18484..18906
                     /locus_tag="U0290_001441"
     CDS             18484..18906
                     /locus_tag="U0290_001441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM2301485.1"
                     /translation="MKITTKGRYGLTITLELAKRIGDGPISLRSIAQDKNLSEHYLEQ
                     LIGPLRNAGIVKSIRGAHGGYVLNGDPEKITAGDIIRTLEGPIVLVESMEDEEAAQRE
                     LWTRMRNAVRDVLDQTTLADLLKHSTDAELSDGYMFYI"
BASE COUNT         5430 a         3937 c         3332 g         6341 t
ORIGIN      
        1 aagtataggt aatcactttt ttctggataa agtgctgctt ccatcgaaga gtctccacta
       61 tttgaaattg gacctggtgg tagtccattg tttttgtatg tgttgtatgg tgaatcgact
      121 tctaaatctt tgtaagtcgt tttacttttg tgttcaccaa gcgcataaag aacagttggg
      181 tctgtctgca atcgcatatc ttttgctaaa cgattataaa atacgctggc aatcattttg
      241 cgatctacgt tttcagttgc ttctttttcg ataatggaag acatcgttaa gaatttgtgt
      301 acagacattt tttgtttcgt tagttcatcg cggtacttag caatgttcac atccgttgcc
      361 ttgaccatct ctgtaataat ttgttctgca gatacatccg ttcctttgaa ggtgtaagta
      421 gctgggtata aataaccttc taatggatgt ttaatagatt tgtttaatac gtcgtttgtt
      481 actgtatctg gatatgcttt aatcatggaa gcaacaaatt caggatcgtc cattgtttta
      541 agtacatctg ctttttttag ttttggttga taagcaacaa ttctatcagc aatttggtct
      601 aacgtgtaac cttctggaat gaccagttta gcaggtgcta ccgtttttcc ttcttgcatt
      661 tttttgacga tttgatctgt gttcatcgac ggactgaatt catagttccc tgcttttaaa
      721 ttcgtatcat tattatattt tacataaaac gagaaaatag aagcattatt aattactttt
      781 ttatcttcta gaatagtaga aatgtctgaa atactagagc ctgctgggat ttctacggtg
      841 attttctctt tacttgcttc atcttttggt tctagttgcg attttacata ataataacct
      901 gaaaaagttg caatcactaa aattaaaata ataacagaaa ttataattgt aattttctta
      961 ccttttgtat tcttcatttt agacctcatt tcattgaaaa caattctaat ctattatacc
     1021 gattatctaa aaaaaatgct attcaataag gaaaattttc ttaaaaagtg acgtttttat
     1081 gttttttcgg tataataaat agcgtgattt aacgaacaag acagaatcag tcaaagactt
     1141 gcttctgcca attaattaaa tattgaagga gtcttttgga tgttacatac attaatacaa
     1201 agtttgcaag atttcacgat gtggttagta gactcgcttg ggcactgggg tattttcctc
     1261 ggaatgctga ttgaaagtgt ttgtataccg ctaccaagtg aagttattat gctattcggt
     1321 ggatttatgg cggaagccgg gaaacttaac ttctggctcg ttgtttttgc tggtattgct
     1381 ggtaacttcg tcggttcact gattgcttac tacatcggta aattcggtgg tagagcttta
     1441 gtattgaaat tcggaaagta tatattctta aatgtgaagc acttggataa agcggaatta
     1501 tggtttggtc gttacggagc aagagctgta tttttcggcc gtgttttgcc agtcatccga
     1561 acatttatct ctttaccggc tggaattgcc aaaatgaatg tctggaaatt tgttatatat
     1621 acgattttag gctgcattcc gtggaatatt tttctgacat ggcttggtta ttcattaggt
     1681 tccaattgga gcgttgtgga aaaatataca cgaccaatta gctatttaat gttagctttg
     1741 gttattgcca tcgttgtcta ccttgcttac aaagtatgga ataaacgcgc tagaaatgca
     1801 aaataaaaag catgtcttga cagtttttgt caggacatgc ttttttaatt tttattcttc
     1861 gtcttcgtca gctaagaatg ttgcaaggat ttcttcaatc atatcccatt cttcatctgt
     1921 ttcaactggt ttaagttgac cttgtttgcc ttcttcatct tggatatagc tagatgcaag
     1981 gatttcgatt tcttcgtctt cccctttgcc agccgggaaa tataaaacat aagatttgtc
     2041 aaagtcttcg gaatcaaaat caaaaagaat ttcgtaagct tcttcttttc cttcttcgtt
     2101 tgtgatccaa ataatatttt cttcttcatg attatggtta tgttcttctg ccattaaatt
     2161 cacctcaaat taattagtag tgtccagata ggactgtaaa atcattactg cagctaactt
     2221 atcaatcact tcttttcgtt ttttacgcga aacgtctgct tcaatcaaag ttctttcagc
     2281 ggcagaagtg gtcaaacgtt catcccaaag tacaacaggg agtccaattc ttgactcaag
     2341 tacttcagca tatattttgg aactttcagc acgaggtcca atagtgttat tcatattctt
     2401 aggtagtcca actacgactt tttccacttc gtattcaagc acgagctctt ttacgcggtc
     2461 atagccgaat tgctttctat tctcgtcaat ctgaatggtt tccacacctt gtgcggtcca
     2521 accaagtgga tcacttatcg ctacgccgac tgttttcgag ccgacatcta aacccattat
     2581 tctcatttct caccaatttc gttatttttc agatacgctt tgacaagttc ctcgataatt
     2641 tcatctcgtt ctaaacgacg tatcatactt ctagcatcct tgtgacgagg aatataagct
     2701 ggatcgcctg aaagtaaata gccaacgatt tgatttacgg gattatagcc tttttcttca
     2761 agagcaacgt agacttgttt cattaatttt tttacatctt cttcaattga atcatcgccg
     2821 aagttgtaaa acattgtttg atcttttgaa tccataatcg aagcacctca ttccttcatg
     2881 tatctccttt cattttacac tatgtgaacg gaaataacaa agaaaaatga ggcactttga
     2941 tgaaatttat gcttgttgtt cttttaccca agtagaaacg taatcaaggg ctgttcctag
     3001 ttctgctgga tttttaccgc cagcttgtgc catatcagga cgtccaccac cattaccgcc
     3061 gcaacgtgtt gccacttctt ttaataattt acctgcatgg taacctgctt tgattgcttc
     3121 ttcagagact gcggagatta agtttacttt atcgccttga acagcgccta aaacaagaat
     3181 gcctccaatt tttttatctt tccagttatc cacgaattga cgtaattggt tcatatcttt
     3241 tgcatttact tgttttgcaa tcacttttac gccgccgatt tcttctggtg attcaaaaat
     3301 atccgcgctt gctgcactcg ctaatttact taatagtgat tcattctcgc gtttcacttc
     3361 acgtaagtca gcttgtaatt gttctacttt ttgcggtgtt tctttggttg ttgtttttag
     3421 tagactcgct gcctgtttta atgtgttttc ttgttctgtt acaaagcgat aggcttcttt
     3481 gccagtaaca gcttcgatac gtctagttcc cgctccgata cctgtttcgg atacgatttt
     3541 gaatagacca atatcagctg tattacgcac atggacaccg ccacatagtt caatgctgta
     3601 tttgcctact tgtacaactc gtacgatatc gccgtatttt tcgccaaata gtgccatagc
     3661 gccaagttct tttgcttctg ctattggcat ttcttcaatc acaacattga tttgttccca
     3721 gattttttca ttcacgattt cttccatttt cgttaattct tcttctgtaa tttgaccaaa
     3781 atgagagaag tcaaaacgta aacgatccgg tgaaacaaga gatccagctt ggttaacatg
     3841 ctcgcctaat gtgtctttga gtgcgcggtg taaaaggtgt gttgctgtat gatttttgat
     3901 tgtttcgcga cgttttactt tatcaacagc aagtttcact gtgtcgcctg tttttaatac
     3961 gccttctttg acagaaatac ggtgtaaatt ttgtttgttt ggcgcttttt gtacatcttc
     4021 tacataagca agaccagttt cgctctcgat ggttcctttg tcagcaactt gtccgccgct
     4081 ttctgcataa aatggtgttt ctttgaagat gacttgtgct tcacttccag ctgcaacttc
     4141 ctccacaagc gtgtcatctt ggattaaata caagatttct gaaacatgct ctgttgaatt
     4201 atagccaaca aatgcacttt tttcggttaa attagcaagt agttcgcctt ggacttgcat
     4261 cgattttaca tcagcacgag ccgagcgagc acggtcacgt tgttctttca tttctgcttc
     4321 gaagccagcg tgatccactt ttaagccgtg gtcttctgca tattcttctg ttaattctac
     4381 agggaagccg aatgtatcat ataatttaaa aatgtctgcg cctttgataa tttgttcatt
     4441 tgtttctttc gcagttttta ggattgtttc caaaattgct agaccttcgt ttaatgtttc
     4501 gtggaaacgt tcttcttctg tacgaatgac tttttggata aagtctgttt ggttttctac
     4561 ttccggatag aaactattca tgattttccc aactactggt actaatttgt acatgaatgg
     4621 ttcgttgatt gttaggactt ttgcataacg aacagcacgg cgaagtaaac gacgtaaaat
     4681 atatccgcgt ccttcgttgg atggtaaagc gccgtcaccg attgcaaatg ctacagtacg
     4741 aatatggtca gcaatcactt taaatgccac atcattttct tgagaatggc catatttcac
     4801 gccagcgatt tgttcaactt cacgaataat aggcatgaat aaatctgttt caaagttagt
     4861 tggtgcgtct tggatgatgg aaaccattcg ttcaagtccc atccctgtat caatgttttg
     4921 ttttggtagc ggagtgtaag ttccatctgg attgtggttg aactgagaaa atactaagtt
     4981 ccaaatttct aaataacgct cattttctcc gcctggatat aattctggat cacttgcatc
     5041 gtcaccgaaa gcaggtccac ggtcatagaa aatttcgctg tctgggccac ttggtccaat
     5101 accgatatcc cagaaattat cttcaatttc gacgatatga tcatcactta aaccaatttt
     5161 ttcgcgccat aacgttttcg cttcttcatc ttctggatac acagtcacat acaatttatc
     5221 tggatcaaaa ccaatccatt tagggctcgt taggaattcc caagcaaaaa caatcgcccc
     5281 ttctttaaaa taatcaccga tagaaaagtt tcctagcatt tcaaagaatg tatgatgacg
     5341 cgctgtttta ccaacgtttt caatgtcatt tgtacggatt gatttttgag cgttcgccat
     5401 tcttggatta tctggaataa cggaaccgtc aaagtatttt ttcatggttg ctacaccact
     5461 gttaatccaa agaattgtcg gatcattatt tggcacaagt ggtgcactag gttcgatagt
     5521 atgccctttt tctttaaaga aatctaaaaa taactgtctt acttcagcgc ttgataattg
     5581 tttcattttt tatttcctcc ttttggtttt aacaacaaaa aaagcctata tgattgctca
     5641 cagggacgat ttcagtaaaa tcgcggtacc accctgtttg caatgatata gacttgtatc
     5701 attacctctt ccgttatctg ttaacgtgga taagacggat catctaatgg gagagcaatt
     5761 ttggtgcaag cgtggttttc cttccagcca tgggaaaact ctctaatcac gtggaaacca
     5821 aaatcatatt cctatcatgt atcaatttct attcaacaat aaactaaatt ataaagaacg
     5881 gatggctaaa tgtcaactgt ttattagact attcgttgat tgtttctttt caacaaagct
     5941 tccgttttta agcgttagtt tcacatcgga cacttttgca atctcgggat catgcgtcac
     6001 cataataacg catttacctt ctttatgcgc taaatcttgg aataaagtaa ctacttcttt
     6061 actagtacgt tcatccaaat ttccggttgg ttcatccgct acaattaatt ccgtttcaca
     6121 gcagagagcc cgcgctatcg aaacccgttg ttgttggcca ccgcttaacg tcaatacttt
     6181 ttggcgtgcc atgtcttctg tgatacctac tttttccagc atacttagag caaaggcttt
     6241 tttatctggt tgattaacat gggtaatttc cattgcagtt gtgacatttt gtagtgcggt
     6301 catataggtc aacagattat aactttggaa cacaatcgat acatatttat ttctaaactg
     6361 ttgtaagcca atacttttga gtgagctacc tttatagaaa atatcccctt ctttttgcgt
     6421 atcaagtcct cctgcaagag ataagaaagt tgtttttcct gagccagaac tgccgactac
     6481 tgtataaaaa acacccgctt caaaatcata attgatgtca cttaaaatag attcttcttt
     6541 cgttttatac caataagaaa tattttcaaa cgttaatact ttggtcatat cgtcacctac
     6601 tcctgtttag ttagaattgt ttttggattc atacgaagaa cgagtgcagc tggtaaaagg
     6661 actgagataa aggcaattcc gataccaatt ccgcccattt tcagcatatc ttctaatgtt
     6721 acttgaatgt ctaattcttt gatttgttcg gtgtttttcg tcaagttgct cacgctctca
     6781 ccgaatccac ctggacctcc ttgtccacca cctggaccac ggttttctgt cgaacttgtt
     6841 gtttcagtag tagatgaatt ttgttgcgcc aataattgat tgcccgctaa ttgtgctaca
     6901 tagtgactac ttgcagcggc taggccaaag gaaaccagag ctacaattaa aatttccaca
     6961 aagaattgcg caatcaattt gccacgtttt tcaccaattg ccaaaagtac acccatttca
     7021 tatttgcggt cgcgcacttg catcatcacg agtaggccta agattagtgc tccggcaata
     7081 ctcacaatat aaaccacatt tttagagaaa gatgctacgc tattaatcgg gccaatcatt
     7141 tgttgataaa gcgtatcatt ggcatctaat ttaaatgtat cccaatcaat gctatcaact
     7201 ttttttgctt ctttttcaaa agcagaaata ttagccgcat catccatcgt ataaacagct
     7261 gagtctactg tatttttata atcggaaccc ttaattgtat tagctactgt ataaggaaca
     7321 tatactttat tataaggatt taggaaagag aagttttgtg ccatatcact tccagaatct
     7381 gttgttttat aaatacccac aatctttaat gttactttgg tattgccatc actggatgtg
     7441 acagtaaaag aatcgccaac tttccaatca ttttcttctg ctaaattttc ttctaccatt
     7501 gctacatttt tatctttatc agcggaagta attgccacac cacttgttaa ctcactagtt
     7561 cctgcttcaa aatcagtgct agttgcagaa tcaagtaagc cgctaatgct taaatcggca
     7621 tctaccattt gcggtccacc ttggccgcct cctggtcctt gtgtttcggt tgtagtggat
     7681 gattcatcac tcgaagatga tgtatcaccg gaagactcga ttggatcaaa tccggatgct
     7741 aaagcttgtg tactggaata ataattgtaa cttgctacat gatttaactt tgccaaatca
     7801 ttagcatcac taacgtctat cggactactt tgaaattgcg gcttggattc agttgagcta
     7861 ctatcactgc ttgaagcctc gtctcgcatt gtctgcattt gtttttctcg atcaacagtt
     7921 agcgtcactg taccaccaag ctgttctcgc gccaactcac tcgctttatc tgcagccgat
     7981 tgaatagtaa aacctgataa aataagtaca cagacgactg tgaatataat tagttgtaaa
     8041 acagatcttc cttttctcgc tttcatgctg agccatgctc tcttaaaaaa attcatgtga
     8101 tttcctccat tcggtttcta ctccactaag attactgggg agttatgaag aaagtatgaa
     8161 caaactatga tgcatatttt aaactttcgc gaaaaaaata atttggcttg attattgggt
     8221 ctaattaggc tagttttaat gtaagaggag tgaatacaaa ttatgaaatt acttatgata
     8281 gaagataatg taagtgtttg tgaaatgata gaaatgttct ttatgaaaga agaaattgat
     8341 gctacgtttg ttcatgacgg caagcagggt tatgaagcgt tttttaaaga tgaatatgat
     8401 attgcaatta ttgacctaat gcttcctaat atggacggta tgaccatttg ccgtaaaatt
     8461 cgtgaagtaa gcgatgtacc aattattatt ttaacggcta aagaatcaga atccgatcaa
     8521 gtgcttggcc ttgaaatggg tgcggatgat tatgtaacta aaccatttag cccacttact
     8581 ttaatggcgc gaattaaagc tgttacacgc cgcaaaaata gtgccacttc tacagaaaat
     8641 aatgaagata tcctagaaac aacttatttc aaaattagta aacggacacg agaaattttt
     8701 tatcaaggtg agctacttga cgcacttacg ccaaaagaat tcgatttact ctattttttg
     8761 atgcaacatc cacgacaagt gttttcaaga gaacaattgc tggaacaagt ttggggttat
     8821 cagttctatg gagatgagcg cacagtggac gttcacatca aacgtttacg ccaaaaaatc
     8881 gccaccgaaa caaagccatt tttgcacacc gtctggggtg ttggctacaa atttgatgaa
     8941 acggaatgaa gcgaatgaaa tttaaatatg cttaccaatt atttttcaca caatttatca
     9001 ttttgcttat tgcttgtatc atgattgggg tgcttgtctc tcactcctta aaagattatt
     9061 tttaccaaag ccaagtagat gacttaacaa gttatgggca aacgatttct agggatattc
     9121 gctattcgcc acaagatgca acgatgcaag ttttgaatac gtatcagcga attttagatg
     9181 tgaaaaaaat tcattataca atcaaaaacg ccaacgatga aaccatttat ccaacacaga
     9241 tgaatcagcc gttaccaaag gatttctcta tttcttcgga tgataagaaa aagcttgaaa
     9301 gtggcgaaac agttagtaag aaaatagata atcgctttaa taaagaaatg acaattgtgt
     9361 acgtcccaat aatgaatggc gacaaatttg tcggttctat cgtgctcaat tcacctatta
     9421 gcggtacgga gcaagtaatt ggtacgatta accgctatat gttctacact attttacttt
     9481 ctataacggt agcacttatt cttagcgcaa tcttgtccaa actacaagta aatcgaatca
     9541 acaaactacg agcagcgaca aaagacgtta ttcaaggcaa ttacaaagct cgattgaagg
     9601 aaaataattt tgatgaaatt ggtgcacttg ccattgattt caataaaatg acacaaaccc
     9661 ttgaaacatc tcaagaagaa atagaacgac aagagaagcg gagacgccag tttattgctg
     9721 atgtttctca tgaaatgcgt accccgctca caacgattag tggcctcacg gaaggtttag
     9781 taaatgatat tattccaaaa agtgaaacag atcgttgcat agcactcatt gatacagaag
     9841 ctagacgttt aacgaaacta gtcaatgaaa atttagatta tgaaaaaatc cgcagtaaca
     9901 aaattaaact tcaaaaaaca cgttttaatg gtaaggaatt ccttgagtta atcaaagaac
     9961 aacttgatta tgtatcaagc gaaaaaggta acactattac tgtttctatc gataaagaca
    10021 tggcgattta cgcagattac gatcgtttaa cacaagtatt tatcaatatc gtcaaaaata
    10081 gtgtccaatt tactgaaaat ggtcagatta ctctaactgg cacacaagat tataaagaat
    10141 ctgttttaac gataacagat actgggattg gtatgaatac agaggaatta gaacaaattt
    10201 gggaaaggtt ttataaagca gatatgtctc gaacaaatac cgcttttggc gaatctggta
    10261 ttggcttatc cattgtgaag cagttaattg aatatcacga tggatcaatt acagtgacta
    10321 gtgaaccaaa taaaggtact tcatttacta ttcgccttcc ttttttccaa gataacgaac
    10381 aataaaaaaa gaaccacttt ctattttttt agagagtggt tcttttttat cctgccataa
    10441 attgttctgg agtaatccct tccattccaa tcatcggatc aatttccgta atattttcag
    10501 ctgtgagaat tcgtttattt gtcatttgtt ctaataaaac atcttcgctc attaaacgtt
    10561 cagagagtgt tgtattacgt ttattttcat caattcgttc tatccccatt cgaaaagctt
    10621 cttcttcccc gcaaagaatg agaaattgtt tacttcgcgt tactccggtg tatattaaat
    10681 cgcgccgtaa catccggtag taactgcgga caatcggcat aatcacaatc ggaaattcac
    10741 ttccctgcgc tttatggatc gaacaacaat aagcatgggt caattgatta aattcttgcc
    10801 tatagtaaga aacctctgtt tggtcaaatt gaacgacaat cagatcttgt ttttcggtat
    10861 tttctttggc gtatataata gacacaattt caccaatatc accgttaaac acatttttct
    10921 ctggttgatt aatcaattgc agtactttgt catgcacgcg atactttatg tcaccaaatt
    10981 gaacttcttt acgacgccct gtatcatttg gattgaaaat ttcttgtagt tttttattta
    11041 aaatatcaat gcctgcagga ccacgataca ttggtgctaa aacttggatg tcttttgctc
    11101 gaaatccttt gttttttgca ttttttacca cttgttcgac tacatcacca atttgattta
    11161 ccgtgcaatg aaaaaaggag cgatcggcgc tatttttggt gaaatcagct ggcaacatgc
    11221 cttcttttat ataatgcgcc atttcgataa tggaagaacc atccttttgg cggtaaatat
    11281 ctgaaagagc tacagttgga atttgttcag attgcagaat atctttgagt acttgacctg
    11341 gtccgactga aggcaactga tcttggtcgc caacaagtac cacttgcatg tgcgctggta
    11401 aagcacggaa taattgatta gcaagccaaa tatctaccat tgacatctca tccactatca
    11461 acagtcgtcc atcaatcagt ctttctgcat catcatccat ttgttcttga ccattcattc
    11521 caagtaaacg gtgaatggtc atcgcaggaa gccctgttga ctcagacatc cgtttagcgg
    11581 cacggccagt tggagcagca agaagaacgg ggaaagtcgc tccatctttg taagcatggg
    11641 gatcaaggct cacaccattt agttccgcat aaagctccac tatcccttta atgactgttg
    11701 ttttccctgt cccgggacca ccagtaagta cgagcatcgg agacattaaa gcttgttcta
    11761 aagcctgtcg ctgcgaatct ccgtagtgaa cgccaatccg ttcttctaat tctcctagag
    11821 ctagcagaaa ttcggattgc ggaaattgtt cttggtattc tgtttgttta agcattcgct
    11881 tcacgtgata tgcaaagccg ctctctgaat aatagagtga tggcatgtaa acacgtgtat
    11941 tttccgtaat aatcttttgt tcctcagcta atttttctac ttgagctact aaaatatttt
    12001 ggtcaatacg aatgccttcg ctttcttcca gtaaataagt tacttctccg agcagaacct
    12061 cttgctccat atatacatga ccttgttgca tacaaaccga atctaacata aataaaatcc
    12121 cagcacgaag ccgttctgga tgattcccgc caagaccgag tttccgtcca agctcatcgg
    12181 cacgctgaaa accaatccct tttatatcct caatcaattt ataaggatta ttctctaaca
    12241 cttcaatcgc attttgttta taggcctgga aaattttcat ggataattgc ggaccaaagc
    12301 catattcgtt taatccgacc atcacatgct ccaacccttg attttctcta agggaagcaa
    12361 gcaaactttc tgccgcgcca gatggcaact taggtactgt atttagcaag ctcggatcgg
    12421 ataaaatttt tgtgatagca tcgtcgccaa tcgtatccac aatattttca gcagtgactt
    12481 taccaatgcc tttaaaaagt tcaccggata gataattaat taagcccgct cgtgattgtg
    12541 gcatttcctt acgaaaccgg tctgctttaa actgttgacc aaatttagca tgttcctgca
    12601 ttttcccgta gaaagtgtat acttcttgct cgtgaagcgc tgggaaaaaa ccggttacga
    12661 taatatcttt ttcgtcccaa tccgcattgg tttctttgac caatattcgt acaacagaaa
    12721 agaggttttc ggcattgtaa aaaatggtgg acaacatcgt gcccttcatg aaaagttctt
    12781 ctggtgtatc gttaaataga gcgagtgatt cttgttcagc catcctaagc cgcctccttt
    12841 ctaattcgtt ttactctact tcgttctcta aatcttgaat tgcatttaag gcgttttcag
    12901 ccaattcatg tgaagcacct gtagcaatcg ctcgttcaaa atagttttta gcaagaacga
    12961 tatctccttg ccacgccaga taagctgcac caatattgta aagtgcatct ggatcttcag
    13021 gcttaacaag taaaacgcgt tctaacatat taatcgcatc ttcataaaaa ccactgcgag
    13081 caagcacaat cccatattgg aataacgctt cgccgtcttc tgggtttaat tcgacacttc
    13141 taagtaaata tggcatcgca agtgttagct cctccatttg aacaaaactc attcctaaca
    13201 tgaaaaataa atcaccattt tccattcctt gttttgtggc attttggaag ctatctgccg
    13261 cttcttgata acgctctaat tcataatata aatttcctaa gctatagtaa gcagctggaa
    13321 ctgtgtcatc tagctctagt gctcttttga aaaataattc cgcacgttca aaatcatcca
    13381 ttgaaagtaa aacatttcca aaattaatat aaccaactgg atcacttgga tgttcttcaa
    13441 ttacttctgt aaataacttg actgcttctt ctaaatttcc ttcttgcatt tgtttaatac
    13501 ctaattgatt tttatccatg ttatccctct tatctttcct gattttttac agatgtatta
    13561 agccacgtaa tgagcgcatt cgctacttga tcagtttgtt ctggtccact aatcgttgct
    13621 tttccgtccc catgttgttc gccatatgaa ccgaactgcg catgatttcc acctttaata
    13681 gagacaaagg tagtatcttt aggtaagtat tttttatttt tattataaga atcttggttt
    13741 aacacttcat ccttagtcgc tgtgacagaa agcgctggaa aagaagcatt ttttaaggaa
    13801 cctttcttat ctgggtaact agctaagaaa aacgcgcctt ctatttcgct ttcgttatca
    13861 tgtgcaaatc tagaagacat cacgccacca agcgagtgtc caccaatgac aaatttttca
    13921 tccggagcct catcaataat atcagcagct cgatttttac caaatacagc taaattaagg
    13981 ggcatttcaa cgatgtacgt tttgtaaccg ctcgaagcta gtttgtttgc aagaggtgca
    14041 taacttaacg catcaacaaa agcacctgga tataaaataa cactcatatc ggcatccaat
    14101 ttacgcggag taaaaacaag gatgtcattt tcttcaagca catccactgc tttagttgaa
    14161 tttgcagcat tttctgcagt tgtagacggt tctgagttga aataaaaata tccccaaata
    14221 agaagacaaa ataaaacaat cgcactccca aaaatcgcta tctttttcat aaaggacctc
    14281 ttttccctgt ttcgtataat attttaccat aaaatctgtt taaaaaaacg catttaaaca
    14341 agaaaaaaac cggagtctcg tagaaaacaa gattctccgg ttccagtttt agcctacata
    14401 atctaacttc gcgccgtttt tccaaaccgt atcgattgtt ccaccgccaa ggcaaatgtc
    14461 cccgtcgtaa aatacaaccg cttgacctgg tgtgattgct cgaactggat cagcgaaaac
    14521 tacttctgct gtcccatctt cgcgcaagtg cacggttact ttcgtatcag tttgacgata
    14581 gcggaatttg gcagtacatt cgattgtttt cggtttttct gcattcgttg tgaaagaaat
    14641 atctgtcgca attaacgaat ctgaatatag tgtttcatga tggaaacctt gttccacaaa
    14701 caatacattt tcttttaagt ctttaccaac aacaaaccaa ggttcaccgt ctccaccaat
    14761 acctaaacca tggcgttgac cgatcgtgta atacatcaag ccgtcatgtt tccctaacac
    14821 ttcaccgttc agtgttctca tttcaccagg ttgcgccgga agatattcac ttaaaaattg
    14881 cttaaagttt ctttcgccaa tgaaacaaat cccagtgcta tcttttttgt ttgcagtagc
    14941 aagtccggct tttttcgcaa tttcgcgcac ttctgttttt tccatgccac caaggggaaa
    15001 catcactttt ttcagttgat cttgtgaaag ttggtttaaa aagtacgttt gatctttatt
    15061 attatcgaca cctcgaagta attcaatttc atcgccgact tttttcactt gtgcgtagtg
    15121 accagttgcc acatagtccg caccaagact ttccgcatgt tctaaaaatg ccttaaattt
    15181 aatttcttta ttacacataa cgtctgggtt tggcgtgcga ccgagcttgt attcatctaa
    15241 aaaatacgta aacactttat cccaatactc tttttcaaaa ttgaccgcat aataaggaat
    15301 accgatttga ttggctacgc gaatcacatc atcataatcc tccgttgctg tacaaacgcc
    15361 aaattcgtcc gtatcatccc aatttttcat aaagatgcca ataacatcat aaccttgttc
    15421 ttttaatata tgagcagtga ctgatgaatc tactccgcct gacatgccga caactacacg
    15481 aatgtcacta ttatttgtac tcaaagttcg ctcctcacct tcttatattt tcattaaacg
    15541 cgttactact tcactaattt tcgtagccgc catttccact tcttctaaat ggtttcctag
    15601 tccaaaacta atccgaacgg tctcttgaat cgctgggtga ttttcaccaa aaagagctac
    15661 taatacatgc gatggatcta ctgttcccgc cgtacaagcc gaaccactag aaactgcaat
    15721 tccgtccata tctaaattca ttaataattg ttcaatcgaa actcctggaa aacgcacact
    15781 aaatacatgt ggcaaggtat tggcttctaa tccattcact tcaaaatcaa gatctgccga
    15841 acgccaaatt tctgccattc gttttttgaa ggaaatatat tcctcatttt ttagctctcg
    15901 ttcattcatc atgatagaag aagcagcact aaaaccacag attcccgcta gattctccgt
    15961 tccagcgcga cgttttcgtt cttgttctcc gccgtgcatt tggtagataa gccgtgtgcc
    16021 atttttgacg tataaaaaac ctacgccacg tggtccattt attttatgag aagaagtagt
    16081 taataaatca acccctagct ccgttacatt tatatttaat agcccataag cttgtactgc
    16141 atctgtatga aaaattgctt gatgattgcg caacactgca ccaatctccg caatcggttg
    16201 aatcgtgcct atctcattat ttccatacat aatagaaact agaattgtat ctggacgcaa
    16261 ggcctcttgt aaactctcta tagatactat tccatgctca tctactggca aataggtaac
    16321 ttcaaatcct tgcgtttcaa ggtattcaca tgtttttaag acagcgtgat gctcaatttg
    16381 agaagtaata atatgtttac cactttcttg ctgtgctaaa gctgctccaa taatcgccaa
    16441 gttatcgcct tctgttccac cacttgtaaa aattatttct ttttctatag catggatact
    16501 atctgcaatt gtatgacgag cttcatccaa agcttttctt gcctctcgtc cagcgtaatg
    16561 gatactggaa ggattgccgt acgtatttgt aattgcgcca agcattgttt ggataacttc
    16621 tggatgaatt ggacttgtcg cagcatggtc taagtatatt ctattttcca ttttttatcg
    16681 cgtccttttt tgtagacgaa ttcctgttcg ccgttaatcg tttcttattg taacagcaat
    16741 actcctgtaa agtaaagagg aataactcct atttacacgc aaaaaagaaa ccccaatcgt
    16801 accgtttagg attcccttcc tttgaacccg ctatcaatta aagcaggtgg gtgctctgtc
    16861 taacggtttg cacttcctcg tgtgaaggca tgtgcgccgc gccggaactc caagctccct
    16921 aggtataaaa aattgttcgg ttcaaaaata ttaggaacta tatcgaatac attagggttt
    16981 cttttcttca tttagaatac catagaaaag acgaaatttc aatgttagcg acttttcatt
    17041 tggcactttt tttattcttt ttttgcttta ttttcgttaa ttttttgata cacaccagca
    17101 attgtctgct caaatttaga agtgaatttc ggcgcataat acaatttgtt tttaagacga
    17161 tctggtaaat attgttgatc cacccaagcg ttatcataat tatgtggata tttataatca
    17221 atcgctcgtc caagtttttc tgcaccagaa taatgtccat ctcgcaaatg atctggcact
    17281 tctccacttt ttccttggcg aatatctgct agtgccgcat caatcgccat aatagcagaa
    17341 ttggatttag gcgaaaggca aagctcgatg acagcattgg cgagcggaat tctcgcttca
    17401 ggaaacccga ctttttctgc ggtttgaatg gctgcgagtg tatgcgcccc ggcctgtgga
    17461 ctcgcaagac caatatcctc atatgccata acgagcattc tccggctaat actgactaaa
    17521 tctcccgcct caattaaacg tcccatataa tggagtgccg cattcacatc gctaccacga
    17581 accgattttt gaaaagcact taatacatca taatgggcat cgccgtcttt gtcatgggct
    17641 aaacttttct tttgtaaaca ctcctctgcc acatcgagcg taatatgaat cacaccatcc
    17701 tcatttggtt cagaagaaat gacagctaac tctaaggcat tcagcgcact tcgcacatcg
    17761 ccgttactcg ccgttgcaaa atgttttttc gcaacctcat ctatttctac atcataattc
    17821 ccaagcccgc gttctttatc tgaaagcgcc cggtccattg ttatcataat atcttctacc
    17881 gttagaggtt ttaactcaaa aatttgcgtt cggcttcgaa tagccggatt aatcgcgata
    17941 taaggattac ttgtcgttgc acctattaag ataatcgcgc cactttcaag taatggtaat
    18001 aaaaaatctt gtttcgcttt atccaaccga tgtacttcat ctaaaagaag aataaccgtg
    18061 ccgctcattt tcgcctcggc tgctacaact tccatatctt ttttattatt ggtaactgca
    18121 tttaatgtac ggaatgcata ttttgtactt ccagcaatcg cacttgcaat cgaggttttt
    18181 ccaattccgg gcggcccgta taatatcata gaagataatt gttttgcttt gaccatccga
    18241 taaataattt tatctttacc gactaaatgc gtttgtccca cgatttcatc tagtgctttc
    18301 gggcgcatcc ggtaagctaa aggttgaatt gccatataac cgctccttct tatttgcttg
    18361 tttactatta taacataaga acatctgtgc gttcacccac ttgtttcctt tgccttcttt
    18421 ctgtaattcc gatataatag atgcggtata agcggttttg aaattactgg aggttaaata
    18481 aaaatgaaga ttacaacaaa aggtcgctat ggcctaacaa taacacttga actcgcaaaa
    18541 agaattggtg atggcccaat ttctcttcgt agtatcgccc aagataaaaa tttatcggaa
    18601 cattatttag agcagttaat cggtcccctt cgtaatgcag gaattgttaa aagtatccgc
    18661 ggggctcatg gtggctacgt tttgaacggc gatcctgaaa aaattactgc aggtgacatc
    18721 atccgcacac tggaaggccc gattgtactt gtcgaaagta tggaagatga agaagctgct
    18781 cagcgtgaat tatggacacg aatgcgcaat gctgtccgtg acgtgttaga tcaaacaaca
    18841 cttgctgact tattaaaaca ttctacggat gctgaactat cggatggtta catgttttat
    18901 atttaatgaa aaaagcctat tttcgaatag gctttttatc tgccatcgaa acggaaaata
    18961 cagtctatta ttatctgatt attccgaaat aaacatcaaa agcaaacaat tgaaaccgtt
    19021 ttatgttaga taatctaacc
//
LOCUS       DASDYO010000050        19037 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.050, whole genome shotgun sequence.
ACCESSION   DASDYO010000050 DASDYO010000000
VERSION     DASDYO010000050.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 19037)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19037)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19037
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.050"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            85..909
                     /locus_tag="U0290_001442"
     CDS             85..909
                     /locus_tag="U0290_001442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465367.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEM2301486.1"
                     /translation="MGIMNSLLQQKEMVVKDWLTYYVSVDDPYIFTLKNDHRLMDETG
                     FVLENLFIGMTEDLGKMNAFARELGKAQFITSLGISRILFHIRLLEEFLLDYASEIKT
                     KSANYRELYLFSIKLHQVFSSFTQNLIEGYTRANEQKIIQKENQIIKESTKLIWIAEN
                     VFLLPLIGRITDERAKQLTETALVEVCEQPVNYLIIDLSGVQLESPNIGKYIEYFFSS
                     LKLVGVTPIITGMQPQTAKVMVQVNLTEQHGIKTFATLRQATKTLMKEKEARNARK"
     gene            complement(927..1838)
                     /locus_tag="U0290_001443"
     CDS             complement(927..1838)
                     /locus_tag="U0290_001443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465368.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM2301487.1"
                     /translation="MQNETLIIEESHARERVDKVIAEMMGKSRSAIQLMLKNGDITVN
                     GELAKPNYKVQVGDEIHYEVREPEELEVLAEDIPLDIYFEDKDMLVVNKPEGMVVHPS
                     AGHASGTLVNALLFHCDDLSGINGKIRPGIVHRIDKDTSGLLMVAKNDHAHESLAKQL
                     KDKTSDREYIALVHGDIVHQKGTIEAPIGRAKEDRQKMAVVRDGKEARTHFEVLERLP
                     GYTLINCKLDTGRTHQIRVHLKYIGHPLAGDPKYGPKNTIKGNGQFLHAAKLGFDHPT
                     TKERMMFEAPLPSSFEKALKSLRQEEY"
     gene            complement(1838..2302)
                     /gene="lspA"
                     /locus_tag="U0290_001444"
     CDS             complement(1838..2302)
                     /gene="lspA"
                     /locus_tag="U0290_001444"
                     /EC_number="3.4.23.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="signal peptidase II"
                     /protein_id="HEM2301488.1"
                     /translation="MYYYLITLAVIALDQLTKWIVVQNMEIGQKIEVIPGFLYWTSYR
                     NDGAAWSILEGHMWFFYLITVVVIGIIIYIMQKYAKGKRLFSISLAFILGGAIGNFID
                     RVLHQEVVDFVQTVWGNYYFPIFNVADAALSVGVVLMLVYVFVDDRKTKGIK"
     gene            complement(2384..3667)
                     /locus_tag="U0290_001445"
     CDS             complement(2384..3667)
                     /locus_tag="U0290_001445"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465370.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEM2301489.1"
                     /translation="MQKFFNKVFRLNEHKTNFRTEFLAGMIGFFTVAYIIVVNSSILA
                     EAGVPYQGAVLATIFISALGCLIMGFWANAPLILMPGMGINALFAYTLVQGMGLSWQV
                     ALAAVTMSGLLFMILAFTPLAGKLNEAIPLILKQAITVGLGLFLIFLGLEKGGIVTRG
                     KHAIIAVGDLGDPFVLATLVTLLLTMILVIRKIPGAFLWSLIIGTVVGVMFGVAGKAG
                     GASISVAPWSDVLFKADFSGMASVGFWSAVFTMTMVIVFETVGLTNGQVRQLKQTEKL
                     PRILKASSLTAFLSGLFGTSPTISALESGSMFASGAKTGLATITTGLFFIASLFLMPV
                     LSFIPNSAIAPILIIIGMSMLQEFKEMDLSNAAETFSALLIIVLIPLTYSIADGIAAG
                     FIAYPILRAFTKNEERTSPVMYVIAALFLLQFIIQ"
     gene            3841..5211
                     /locus_tag="U0290_001446"
     CDS             3841..5211
                     /locus_tag="U0290_001446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465371.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM2301490.1"
                     /translation="MQKTVTYGAKWKQFLTIFTPIVITQLTLFSMTFFDTTMSGNYSN
                     QALAGVAIGSSFWAPVNAAFSGLLMAITPIIAQLIGAKKEKQVKNTVHNGLYIALFLA
                     FILILINFLVVPTILTHMPVTAEVAGIARHFLNGICIGIPAFFISAILRSFIDSLGLT
                     RVTMLITLCTVPFNIFLNYCFIFGNFGFPEMGGAGSGYATGITYWLVVLVSVILIQTQ
                     TRLRKFGIFKGLTALRFSKIKEIIGIGVPNGLTILFETSIFSAVTILMGAFGTETIAA
                     HQSANSVCTLLYAFPLSVASTLTILGGYETGAKRLKDAKQYRHIGMAAAIFIGCVNGA
                     ILFFFRDIIAGFYTNDPALSNLIMHFLVYAILFQFADAVLSPVLGALRGYKDVTVTSI
                     VAFISYWLIGLPVGYGLSFTNLGPFGYWIGLSTGLFVAAFILSIRVRKTEQKLSFNTK
                     DAEISS"
     gene            complement(5227..6159)
                     /locus_tag="U0290_001447"
     CDS             complement(5227..6159)
                     /locus_tag="U0290_001447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465372.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter substrate-binding protein"
                     /protein_id="HEM2301491.1"
                     /translation="MKKIIVVALFALVVVLAGCSSQNSDSKKTDGKLNVVATYSILAD
                     IVKNVGGDKIELHSIVPVGVDPHEYDPLPANIQSAADADLIFYNGLNLETGNGWFDRM
                     LETADKSRDDKEQVVELSKGVKPKYLTEKGKTSETDPHAWLDLHNGIIYTENVRDALV
                     KADPDNADFYKENAKKYINKLATLDKEAKQKFADLPENQKTLVTSEGAFKYFAARYGL
                     KAAYIWEINTESQGTPDQMKQIVGIVEKEKVPNLFVETSVDPRSMESVSKETGVPIFA
                     KIFTDSTAKKGEVGDTYLEMMQYNLDKIHDGLAK"
     gene            complement(6156..6998)
                     /locus_tag="U0290_001448"
     CDS             complement(6156..6998)
                     /locus_tag="U0290_001448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465373.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEM2301492.1"
                     /translation="MLFLEGLMQYSFLQKALITSVTVGIVSGVIGSFIILRGMSLMGD
                     AISHAVLPGVAISYMMGMNFFIGAATFGIAAALGIGFVNQKSRIKNDTAIGIVFSAFF
                     ALGIILISFAKSSTDLYHILFGNVLAVRSSDMWMTIIIAIIVISLVALFYKEFLVSSF
                     DPVMAEAYGLNVKFLHYFLMLLLTLVTVSALQTVGIILVVAMLITPAATAYLLTNKLS
                     KMIVLASTFGAVSAIIGLYFSYIFNLASGAAMVLVATIIFFIAFLFAPKQGLLFSKKR
                     EVIE"
     gene            complement(7002..7724)
                     /locus_tag="U0290_001449"
     CDS             complement(7002..7724)
                     /locus_tag="U0290_001449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEM2301493.1"
                     /translation="MEIQGLTIAYKQKVAIDNVTLQIASGKLTGIVGPNGAGKSTLLK
                     GMMGLIPREQGQVTLADKPLTYWRKKIAYVPQRSEVDLTFPITVFDMVLLGTYPALGL
                     IKRPGKKEKQLALDALEQVEMTGFMKRQIGELSGGQLQRVFIARALAQHAEIFFLDEP
                     FAGIDMTSEALIMRLLKKLRDNGKTIVVVHHDFHKVAAYFDDIILLNKKLVAHGPVEQ
                     TFTEEKIQFAYGDAPVAFATGV"
     gene            complement(7884..8300)
                     /locus_tag="U0290_001450"
     CDS             complement(7884..8300)
                     /locus_tag="U0290_001450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465375.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2301494.1"
                     /translation="METYLEIETLIKRIFNSFRHEVEAVLDKRLSGSEYRVLSLISSG
                     LTKTSELAKTLDVSASHITAITDTLVEEKFITRHRSEVDRRIIELKLTPNAEEFVKEI
                     DKKKKEMIVKRFAVFSEYEQAEFRKLLKKLADGSIK"
     gene            complement(8337..9827)
                     /locus_tag="U0290_001451"
     CDS             complement(8337..9827)
                     /locus_tag="U0290_001451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S41 family peptidase"
                     /protein_id="HEM2301495.1"
                     /translation="MEESPQNEPNNVEKDEEQKAKPGNGYIKMKLFPFIMLLFAFVFV
                     TALVTTIVMSLGDDKQVKVSIPERKEFTKLYDVYDEITSKYYKDTKSTTMIDGAINGM
                     VNSLDDPYSTFMSKKESSEFNDTISASFEGIGAEIQEKDGAIVIVSPIKNSPAEKAGL
                     RPQDIITQVDGKSVKGDTATEATQKIRGEKGTKVTLTIQRSNEDKPFDVTITRDEIPI
                     ETVYKEMGSDKIAHVTISTFSETTYDELEKALKSLEKDGMKGLVLDLRGNPGGLLDQA
                     VSISSLFVPDGKIVVQEQDKDGDKSAIKADSSSHGDYKVKVPTTMLIDGGSASASEIL
                     AAAAKESGGIKLVGTKSFGKGTVQTATTLSDDSTLKLTVAKWLTPNSEWIHEKGITPD
                     VVVNMPDYATMTIPSSTKVYKNGDFGDDVKTIETLLKALDYNVGKVDGLYDTDTEYAV
                     QRFQAANKLDVTGIMTGVTTDKLVELTQKHLKETDPQLQKAKALVK"
     gene            complement(9982..10188)
                     /gene="copZ"
                     /locus_tag="U0290_001452"
     CDS             complement(9982..10188)
                     /gene="copZ"
                     /locus_tag="U0290_001452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper chaperone CopZ"
                     /protein_id="HEM2301496.1"
                     /translation="MEKLTLNVEGMTCSHCEARVTKALSEVNGVKSAVVSLDEGTATV
                     EFEKGQVTEDALIDAVEEAGYEVA"
     gene            complement(10201..12414)
                     /locus_tag="U0290_001453"
     CDS             complement(10201..12414)
                     /locus_tag="U0290_001453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-translocating P-type ATPase"
                     /protein_id="HEM2301497.1"
                     /translation="MSDKYVRQDLNIFGMTCAACSTRIEKSLNKADGVEKANVNLVTE
                     NAAVYYDPEVTSTEDLIKVVKHAGYDAAEKMSKEEKDAVLEKNFKKEVRRFILSAVLS
                     LPLLLTMVTHIPYIHEMAFAETIGNWINPTIQLVLATIVQFYIGWRFYDGAYKALRGK
                     SANMDVLVALGTSAAYFYSVVEYIRHMIDPSVMPHYYFETSAVLITLILLGKLLESYA
                     TSRTTESIAGLLELQAKEATVIREGKEWLVPVDSLKIGDIILVRPGEKVPMDAEIISG
                     ETSIDEAMITGEPVPVEKKPGDSVIGATINFDGAFQAKITKRMEETVLESIIRLVEEA
                     QGIKAPIQRLADRISGIFVPIVLGIAAVTFIIWYLVTGTVDGSLEAAIAVLVIACPCA
                     LGLATPTAIMAGTGKGAESGILFKGGEHLERTSKVDTIVFDKTGTLTEGKLEVSDKKA
                     ANDHFFPYLFLMEQQSEHPIAKAIIKMLEPENIDASAVKQGKIRAKAGHGMTGNLDDS
                     KVELGAYRYVSSLTTIPKEDDELIESWMHAGKTVVAMAIDGVYAGALALSDTPRPEAK
                     EAIQKLKAQGIKTAICSGDQSVVVENMAKDLGIDMFFAEQLPNDKSALVEKLQQDGHI
                     VAFVGDGINDAPALAASDIGISIGTGTDIAIETGDVTLVSHRLTLIPETIELSKATMR
                     NIRQNFFWALAYNCAGIPIAALGLLAPWVAGLAMAFSSVSVVTNALRLKRYKFKS"
     gene            complement(12429..12722)
                     /gene="csoR"
                     /locus_tag="U0290_001454"
     CDS             complement(12429..12722)
                     /gene="csoR"
                     /locus_tag="U0290_001454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper-sensing transcriptional repressor CsoR"
                     /protein_id="HEM2301498.1"
                     /translation="MKHDQPIVPRKEDETKLLQNRLRRIEGQIRGIAQMVEDDRYCTD
                     ILVQISAANKALKNVGLQVLEHHTAHCVVDAAKNGEDDVMEDLLKAIRQFSKT"
     gene            complement(12846..13670)
                     /locus_tag="U0290_001455"
     CDS             complement(12846..13670)
                     /locus_tag="U0290_001455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-D-alanine carboxypeptidase family
                     protein"
                     /protein_id="HEM2301499.1"
                     /translation="MSSLLTIALAVSISCVHTVEDQYFGGTNADSIAKVEQKSSGNQT
                     LAELEKDPLYPYIDKQNKLTEKDGIKYIENEENMLVLANKDYSLQPTYTPPDLVRPNV
                     TFSFGSQQVEKAQLRKEAATALEEMFVAANKDGKKLFAVSGYRSYKRQQEVFQAEVNA
                     KGDQKAREAVAYPGTSEHQTGLAMDISSENQSYELTEAFGTTPEGKWLQENAHNYGFI
                     LRYMKGREAITKYQYESWHYRYVGKDAATIIYENNWTLEEFFEHVKALQKKVDAAK"
     gene            complement(13728..14429)
                     /gene="deoD"
                     /locus_tag="U0290_001456"
     CDS             complement(13728..14429)
                     /gene="deoD"
                     /locus_tag="U0290_001456"
                     /EC_number="2.4.2.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="purine-nucleoside phosphorylase"
                     /protein_id="HEM2301500.1"
                     /translation="MSVHIEAKQGEIAETILLPGDPLRAKYIAETFLEDVVLFNQVRG
                     MLGFTGTYKGEKVSVMGTGMGIPSISIYVNELIQSYDVKNLIRVGTMGGIQADVKVRD
                     VVIAQAASTDSQINRNTFAGVDFAPVADFSLLKKAYDAGIEKGLSLKVGNVFSADRFY
                     NDQLDKQQLADYGVLGIEMEAAALYTLAQKYGRRALAILTVSDHIFTGEETSAEERQT
                     TFNDMIVVALEAAIK"
     gene            complement(14441..14674)
                     /locus_tag="U0290_001457"
     CDS             complement(14441..14674)
                     /locus_tag="U0290_001457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301501.1"
                     /translation="MGRSFYHFLMTYRDPKLTDQKTEFANNAYRDHSFPKQTRNYHIL
                     CDYLEFNAPYLPGMSIFDELWDAYLLDEEKNKH"
     gene            complement(14737..15642)
                     /locus_tag="U0290_001458"
     CDS             complement(14737..15642)
                     /locus_tag="U0290_001458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2301502.1"
                     /translation="MLKIAVVGLGGIAQKAYLPVFAEMENIEVHLYTRDAQKLKHLSE
                     KYRFDHYHQSIHSMIESGVNAAFVHSSTASHPEVIRTFLANHIPVYVDKPIADNLSEV
                     EELTRLAEEQNTLLMTGFNRRYAPKYQELKALTDTNMIIMQKNRAAQPGEARTFIYDD
                     FIHVIDTVRFLLDAQIEQLHVVPVWQENLLASITVQITAGGKVATAIMNRDSGVNEER
                     LAVMTPSAKYEVENVTETHIYEGTTERFERFGDWETTLYKRGFVSIIQAFLTAVRNGE
                     KAPISKEDALETHRLAEEILRKIEN"
     gene            complement(15725..16162)
                     /gene="msrB"
                     /locus_tag="U0290_001459"
     CDS             complement(15725..16162)
                     /gene="msrB"
                     /locus_tag="U0290_001459"
                     /EC_number="1.8.4.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (R)-S-oxide reductase MsrB"
                     /protein_id="HEM2301503.1"
                     /translation="MDESKKNERLQQLTDIQYNVTQKAGTERPFQNEFYDNEAKGIYV
                     DIVSGKPLFSSNDQYDAGCGWPSFTKPIDEAEVIEHRDLTHGMIRTEVKSADADSHLG
                     HVFPDGPQDKGGLRYCINSAALRFIPVDKLEEEGYQAYKKIFE"
     gene            complement(16169..16702)
                     /gene="msrA"
                     /locus_tag="U0290_001460"
     CDS             complement(16169..16702)
                     /gene="msrA"
                     /locus_tag="U0290_001460"
                     /EC_number="1.8.4.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide-methionine (S)-S-oxide reductase MsrA"
                     /protein_id="HEM2301504.1"
                     /translation="MTKESLEKATFAGGCFWCMVKPFDTQPGIEKVISGYTGGHTVNP
                     TYKEVCSGTTGHTEAIQITFDPAVFPYEKLVEVYWQQTDPTDAAGQFLDRGDSYRPVI
                     FYHNEEQKEIAEKSKAALDASGRFKKPIVTEIAKAETFYPAEEYHQDFYKKEKAHYEG
                     YQVASGRAAFIDANWKG"
     gene            complement(16738..17352)
                     /locus_tag="U0290_001461"
     CDS             complement(16738..17352)
                     /locus_tag="U0290_001461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YpmS family protein"
                     /protein_id="HEM2301505.1"
                     /translation="MQRETRSAPKKPKRNYWKWVCITLISVLLISAGWIYVAVFKLSP
                     QDEPTPSLISNKSMVEFQTSTTKADLNQLISSYIEDFSKDQDIGYKVFVANNVNFTAE
                     AEIFGEPVELRLKFSPEVVDNGNVELTLKDMSVGALPLPVSYVMNYVSKNYKFPDWVT
                     IMPKKEKIYLSLDKLKLQGGTKVRADTLNLKKDDISFTLLVPVK"
     gene            complement(17368..18153)
                     /locus_tag="U0290_001462"
     CDS             complement(17368..18153)
                     /locus_tag="U0290_001462"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEM2301506.1"
                     /translation="MTKKKWLWLTGSVLVIALLVGAVFGIKYYKESKEIPINLVAMGD
                     SLTEGVGDENKGGGYVGIIPKELEEESNIPSVKTSNYGVSGNKITQLEKRLKTNKDFQ
                     EDVKNANVITITIGGNDVMAILQSRLLNVNVDDFTKANKEFQQELETLLKDIRSYNKD
                     AAIFLMGIYNPYTTYFSDIKQFDEIISDWNKASKKTIQQDSNAYFVPIAKVLEDRNAD
                     NKDKPNSLLSDDYFHPNHRGYEKMTSELDKAIVKQLNEGNIPK"
     gene            complement(18168..19007)
                     /locus_tag="U0290_001463"
     CDS             complement(18168..19007)
                     /locus_tag="U0290_001463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM2301507.1"
                     /translation="MRKIKIITDSTAGLTLEEAAKWNIDVLYLTVEIDGQIYNPKTDI
                     TPEEFMVRMAETKELPKSSQPAIGSFVEAYEKYTAEGYEILSIHLTEKLSGTVNAARQ
                     AADMVEGNITVVDCDYTARGQAFQVLKAAEMAQSGDYSVEEIHAKINDIRDKTKLYIV
                     VVTLDNLIKGGRVGRMQGFFGSLLNIKLIAKLTDGQLEEETKVRSNKKVLQYCLNLIK
                     DEPKKIQHLDVVHADGLNLADDFIAESKEITGLTEIPLFFADPVISTHAGTGAFAFMY
                     YTD"
BASE COUNT         5371 a         4015 c         3267 g         6384 t
ORIGIN      
        1 acttttacca gaaattagtc caatttaact gctctatgtg ctatgctgaa atagctaaaa
       61 acatggactt aagaggtgaa tacaatgggc ataatgaata gcttattaca acagaaagaa
      121 atggtcgtga aagattggct aacgtattat gtatctgtgg atgatccata tatcttcaca
      181 ttaaaaaatg atcatcgttt aatggatgaa acgggctttg ttttagaaaa tttgtttatt
      241 ggaatgactg aagatttagg aaaaatgaat gctttcgcgc gtgagcttgg aaaagcacag
      301 tttattactt cactcggaat ttctcgtatt ttattccata ttcgcttact ggaagagttt
      361 ttgctcgatt atgcatcaga aatcaaaaca aaatctgcta attatcgtga attatattta
      421 tttagcatca agcttcatca ggtatttagt agtttcacgc aaaacttaat cgaaggctat
      481 acccgtgcaa atgaacaaaa gattatacaa aaagaaaacc aaattattaa agaatcaacc
      541 aaactaattt ggattgccga aaatgttttt ctgttacctt taattggaag aattaccgat
      601 gagcgagcaa aacaacttac tgaaacagcg cttgttgaag tttgtgagca accagtgaac
      661 tatttaatta tcgacttatc tggcgtgcag ttagagtctc ctaacatcgg caagtacatt
      721 gagtatttct tctcgtcgct taaattagta ggtgtaactc cgattattac aggtatgcaa
      781 ccgcaaactg ccaaagtgat ggttcaagtt aatttaactg aacaacatgg tattaaaaca
      841 tttgcaacct tacgccaagc aacaaaaaca cttatgaaag aaaaagaagc aagaaacgcc
      901 cgtaaatagg tgttcttgct tcttttttaa tattcttctt gacgtaatga ttttaaagct
      961 ttttcaaagg aactaggaag tggcgcttca aacatcattc gttctttcgt tgtcggatga
     1021 tcaaacccta attttgcggc atggagaaat tggccattgc ctttgattgt atttttaggt
     1081 ccgtattttg gatctcctgc taaaggatga ccaatatatt tcaaatgaac tcggatttgg
     1141 tgcgtacgtc cagtgtctaa tttgcaatta attaatgtgt aacctggtaa acgctctaat
     1201 acttcaaaat gcgttctcgc ttctttccca tcgcgtacga ctgccatttt ttggcggtct
     1261 tcttttgcac gaccgattgg cgcttcaatt gttccttttt ggtggacaat gtcaccgtgg
     1321 acaagtgcga tatattctct atccgaagtt ttgtctttta attgtttggc tagtgattca
     1381 tgggcatggt catttttagc aaccattaat aagccagatg tatctttatc aattcggtga
     1441 acaattcctg gacggatttt accgttaatt cccgataaat catcacaatg gaatagtaaa
     1501 gcattcacga gcgttccact tgcatgtccc gcagatggat gaacgaccat tccttcaggt
     1561 ttatttacaa caagcatatc tttatcttca aaataaatat cgagtggaat atcttctgct
     1621 aaaacttcta gttcttctgg ttcacgcact tcgtaatgaa tttcatcgcc aacttgtact
     1681 ttgtaatttg gcttcgcaag ttctccgtta accgtaatat caccgttttt cagcatgagt
     1741 tgtattgctg aacgactttt tcccatcatt tcggcaatca ctttatccac acgttcacgc
     1801 gcatgacttt cttctataat caatgtttca ttctgcatta tttaattcct ttcgtttttc
     1861 ggtcgtctac aaaaacatac acgagcatta gtacgacacc aactgaaagc gcggcatctg
     1921 ccacattaaa gattgggaag taataatttc cccatactgt ttgtacaaaa tccactactt
     1981 cttgatgcaa gactcggtcg ataaaattac caatcgcacc acctagaata aacgctaaac
     2041 taatagaaaa tagtcgcttt cctttggcat atttttgcat aatataaatt ataattccaa
     2101 taacaacaac agtaataaga tagaaaaacc acatatgtcc ttccaaaata ctccaagccg
     2161 ccccgtcatt acggtagctt gtccagtata agaaaccagg aataacttct attttctgtc
     2221 caatttccat attttgaaca acaatccatt tagttaattg atctagcgca atcactgcta
     2281 gggtgattag ataatagtac attttccgaa ccctcttttc acatcagtta gataaaaagt
     2341 acgcgctccc ctttaaaaat aagaagagcg catcacttct ttgttattgt atgataaatt
     2401 gaagcaaaaa taaagctgca attacataca tgactggtga agtacgttcc tcatttttcg
     2461 tgaaagcacg aaggattgga tacgcaatga aaccagctgc aattccgtct gcaatactat
     2521 acgtcagcgg gattaacaca ataatcagta gtgctgaaaa agtttctgcc gcattcgata
     2581 aatccatttc tttaaattct tgcagcatcg acataccgat aataattaaa atcggcgcaa
     2641 tcgcactgtt cggaataaaa gataataccg gcattaagaa aagggatgcg ataaagaaca
     2701 gaccagttgt tattgttgct aaaccagttt ttgctccact cgcaaacatc gagccacttt
     2761 caagtgcaga gatcgttggg cttgtaccaa ataagccaga taaaaaggct gtcagtgagc
     2821 tagcttttaa aatgcgtggt aatttttcgg tttgcttcag ttgccttact tgtccattgg
     2881 taagtccaac tgtttcaaac acaataacca tcgtcatcgt aaagacggca ctccaaaaac
     2941 caacgctcgc cattccggaa aaatcagctt taaagagtac atcactccac ggtgcaacgc
     3001 ttatcgaagc acctccagct ttcccggcaa caccaaacat cacaccaacg actgtcccga
     3061 ttattaaact ccataagaaa gcgcctggaa tttttcgaat aactagaatc atcgttaata
     3121 gtagtgttac aagtgttgct aatacgaatg gatcgcctaa atctccaacg gcaataatag
     3181 catgtttccc gcgcgtgacg attccgccct tctcaagccc taggaagatt aagaataaac
     3241 ctaacccaac cgtaatcgct tgttttaaaa tgagcggaat agcttcattt agttttcctg
     3301 caagtggtgt aaacgcaaga atcataaata gtaagccact catcgtaaca gcagcgagtg
     3361 caacctgcca acttagtccc attccttgaa caagggtata cgcaaacagc gcattaatcc
     3421 ccatcccagg cattagaata agcggtgcat ttgcccaaaa tcccataatc aaacaaccta
     3481 acgccgaaat aaaaatcgtc gcaaggactg ctccttgata aggaactcca gcctccgcta
     3541 aaatcgagct attgacgaca ataatatatg ccaccgtaaa aaagccaatc ataccagcca
     3601 aaaattcggt ccggaaattg gttttatgct cgttcagccg aaatactttg ttgaaaaatt
     3661 tctgcatact ttttcctcat tatgaaattg tccctctccc aacccgcaga gtattgcccc
     3721 tgccacagaa ctttattata acaaagatag tacatatacg aaaggaaaag ttttttgtta
     3781 cgccgccaga acgccttatt tatgctataa tctgaatgga tgcaaaaagg agatgattac
     3841 ttgcaaaaaa cagtcacata tggggcaaaa tggaaacaat ttttaacgat attcacaccg
     3901 attgtcatta cgcaactcac gcttttctct atgacatttt tcgatacgac gatgagcgga
     3961 aattattcaa atcaggcact ggctggtgta gcaattggga gttcgttctg ggctccagta
     4021 aatgctgctt tttctgggtt actgatggcc atcacgccaa tcatcgccca attaatcgga
     4081 gcgaagaaag aaaaacaagt caaaaacacg gtgcataacg gtctatatat tgctttattt
     4141 ttagctttta ttttaattct tattaatttt ttggtcgttc caacgatttt gacacacatg
     4201 cccgttacgg cagaagtcgc ggggattgct cgtcatttct taaatggcat ttgtatcgga
     4261 atcccggctt tctttatttc cgcgattttg cgttctttta ttgattcgct tggtttaact
     4321 agggtaacga tgctcattac actttgtaca gttccattta atatcttttt aaattactgc
     4381 tttatttttg gaaactttgg ttttccggaa atgggtggag ctggtagtgg ttacgcgaca
     4441 gggattacgt attggctcgt tgttttagtt agtgttattt tgattcaaac acaaactaga
     4501 ttacgaaaat ttggtatttt caaagggctt acggcacttc gtttttctaa gataaaagag
     4561 atcatcggca ttggcgttcc aaatggtttg acaattttat ttgaaacgag tattttctca
     4621 gcggtaacca ttttaatggg ggcctttggg acggagacaa ttgcggcaca tcaatccgca
     4681 aatagtgtct gcacactgct ctatgctttc ccgcttagtg ttgcttcaac gttgaccatt
     4741 cttggcgggt acgagacagg ggcaaaacgc ttaaaagatg ccaaacagta tcgtcatatt
     4801 ggtatggctg ctgcgatttt cattggttgt gtaaatggtg caatcctatt tttcttccgc
     4861 gatattattg ctggttttta tacgaacgat cccgctttga gcaatttaat catgcatttc
     4921 ttagtttacg cgatattgtt tcaatttgcg gatgctgtcc tgtcgccagt tctcggggca
     4981 cttagaggat ataaagatgt tacggtcacc tcgattgttg cctttatttc ttattggttg
     5041 attgggcttc cagtaggcta cggtttatcg tttacgaatc ttggcccatt cggttactgg
     5101 atagggttaa gtactggcct gtttgtcgcc gcatttattt tatccattcg ggttcgtaaa
     5161 acggagcaaa aactttcttt caacacaaaa gacgcagaga tttcgagtta atctctgcgt
     5221 ctttttttat ttggctaaac catcatgaat tttatctaaa ttgtattgca tcatttctaa
     5281 atacgtgtcg cccacttcac cttttttagc agtggagtcc gtgaagattt ttgcgaaaat
     5341 tggtacgcct gtttctttag atacactttc catactacgt ggatctacgc ttgtttcgac
     5401 aaataaatta ggcacttttt ctttttccac gataccgaca atttgtttca tttggtctgg
     5461 agtaccttga ctttctgtat ttatctccca aatatatgct gcttttaatc cgtagcgagc
     5521 tgcaaaatat ttaaaggcac cttcgctagt tactaatgtt ttttgatttt ctggcaaatc
     5581 tgcaaatttt tgttttgctt ctttatccag agtagctaat ttgttgatat attttttcgc
     5641 attctcttta taaaaatccg cattgtctgg atccgctttt acaagtgcat cacgaacatt
     5701 ttcagtatag ataattccgt tatgaagatc aagccatgca tgtggatctg tttcagacgt
     5761 cttgcctttt tccgttaagt atttgggttt tacaccttta cttaactcca ccacttgctc
     5821 cttgtcgtct cttgatttat ccgccgtttc taacatacga tcaaaccaac cattccctgt
     5881 ttccaaattc aatccattgt aaaagattaa atcagcatcc gcagcacttt gaatgttggc
     5941 tggcaaggga tcatattcat gtggatcaac gccaacaggc acaatactat gcagttcaat
     6001 tttatccccg cctacatttt ttacaatatc tgctaatatc gaataggtgg ctacgacatt
     6061 taatttgccg tctgtttttt tcgaatcgct attttgactg gaacaccccg caagcacaac
     6121 tactaatgcg aaaagagcta caactattat ttttttcatt cgataacctc ccttttttta
     6181 gaaaatagca aaccttgttt cggtgcgaat aaaaaggcaa taaagaaaat aatcgtcgca
     6241 actaaaacca tcgccgcacc agatgctaag ttgaaaatgt aactaaagta aagtccgata
     6301 atcgcactca ctgctccaaa tgtagaagct aaaacaatca ttttggataa tttattcgta
     6361 agcagataag ctgttgcagc tggcgtaatt aacatcgcca caactaaaat gattccaacc
     6421 gtttgcaaag cggaaaccgt tacaagtgtt aaaagtaaca tcaagaagta atgcaagaat
     6481 ttcacattga gaccatatgc ttctgccatc actggatcaa atgaactaac tagaaactct
     6541 ttgtaaaata gggctactaa tgaaatcacg ataatggcaa taataatcgt catccacata
     6601 tccgaactcc gcaccgcaag cacatttcca aataaaatat gatacaaatc cgtactactt
     6661 ttcgcaaagg atattaaaat aatacctagt gcgaaaaaag cgctaaacac aataccaatc
     6721 gctgtatcat tttttatccg acttttttga ttaacaaaac cgattccaag tgccgctgca
     6781 atgccaaatg tagctgcacc aataaagaag ttcataccca tcatataaga aatcgctact
     6841 cctggtaaca ccgcatgaga aatcgcatct cccataagcg acatacctcg taaaataata
     6901 aaactaccaa taacacctga aacaatgcca actgtcacag aagtaataag tgccttttgt
     6961 aaaaaactat actgcattaa tccttctaaa aacaacatct attacacccc cgtcgcaaat
     7021 gccaccggtg cgtcaccgta agcaaattga attttctctt ctgtaaatgt ttgctccact
     7081 ggaccgtgcg cgactaactt cttattaagt aaaatgatat cgtcgaagta agcagccact
     7141 ttatgaaaat catgatggac cacgacaatc gttttcccat tatctcttag cttttttaac
     7201 aggcgcataa tcagcgcttc actcgtcata tcaatacctg caaatggctc atctaaaaag
     7261 aaaatttccg catgttgggc aagtgctcgt gcgataaaaa cacgttgcag ttggccgcca
     7321 gatagctctc ctatttgtct tttcataaag cctgtcattt ctacttgttc taacgcatct
     7381 aatgcgagtt gtttctcttt ttttccggga cgcttaatta atccgagcgc tggatacgtt
     7441 ccgagcaaca ccatatcaaa aacggtaatt gggaaagtta aatctacttc actccgttgc
     7501 ggtacgtatg cgattttctt tctccaatat gtaagtggtt tgtcagccaa tgtgacctgc
     7561 ccttgttcac gcggaattag tcccatcatt ccttttaata aggttgattt acctgctcca
     7621 tttggaccaa caatacccgt tagttttcct gatgctattt gaagtgtgac attatcaatt
     7681 gccacctttt gtttatacgc tattgttaaa ccttgaattt ccatctaaac cacccttttc
     7741 ccacaagact aatttttaca cataactaaa aatgtttcct aagagcaact ttagttcaaa
     7801 gtataacgga gaatcttttt cttgtaaagt aaaatgttca aaaaaatccc gtagtcgatt
     7861 aaactacagg attttcacta ttattattta attgatccgt ctgctaattt tttgagcagt
     7921 ttgcggaatt ctgcttgttc atactcagaa aaaacagcaa aacgttttac aatcatttct
     7981 tttttctttt tatcaatttc tttgacaaat tcctcggcat ttggggttaa tttcagttca
     8041 ataattcggc ggtctacttc tgaacgatgt cgtgtaataa acttttcttc gactaaagta
     8101 tccgtaatgg ctgtgatgtg actggctgaa acatcaagcg ttttagctaa ttctgatgtt
     8161 ttcgtaagtc cacttgaaat caagctcaag acccgatact cgctaccact taaccttttg
     8221 tcgagtactg cctctacttc atgacgaaaa ctattaaaaa tccgcttaat caatgtttca
     8281 atttctaagt atgtttccat tttcgctacc tccagttttt caaaaaagtc gtacgtttac
     8341 ttcaccaagg cttttgcttt ttgtagttgt ggatctgttt cttttagatg tttttgtgtt
     8401 aattcgacta atttatcggt tgttacacct gtcataattc ctgtcacatc taatttattt
     8461 gctgcttgga atctttgaac agcatattct gtgtctgtat cgtataagcc atctactttc
     8521 ccaacattgt aatctagtgc ttttagcaat gtttcaatgg ttttaacatc atcaccgaaa
     8581 tcgccatttt tgtagacttt ggtggaagac gggatagtca tagttgcata atctggcatg
     8641 ttcacaacta catctggcgt aatacctttt tcatgaatcc attcgctatt aggtgttaac
     8701 cattttgcga cagttaattt aagcgtggag tcatcagata aagttgttgc cgtttggacc
     8761 gtacctttac caaatgattt cgtgccgaca agtttaatgc caccagattc ttttgctgca
     8821 gcagcaagga tttctgaagc acttgcacta ccaccatcta ttaacatagt tgttggtact
     8881 tttactttat aatctccatg tgagctacta tccgctttaa tggctgattt atcaccgtct
     8941 ttgtcctgct cttgtacaac aattttgcca tcgggaacaa agaggctaga aatcgaaact
     9001 gcttgatcaa gtaacccacc aggatttcct cgcaggtcaa gaacaaggcc cttcatgcca
     9061 tctttttcaa gggatttcaa tgccttttca agctcatcat aggttgtttc tgaaaatgta
     9121 ctaatggtga cgtgcgcaat tttgtcactg cccatttctt tgtacaccgt ttcgattgga
     9181 atttcatcac gagtaatcgt gacatcaaat ggtttatctt cgttggaacg ttgaatggtc
     9241 agggttactt tggtgccttt ttcaccacgg attttttgtg ttgcttctgt tgctgtatcg
     9301 cctttaacag acttcccatc tacttgtgta ataatatctt gtggccgtaa accagctttt
     9361 tcggctggag agtttttgat tggcgaaact attacaatag ccccatcttt ttcttgaatc
     9421 tccgcaccaa taccttcaaa actagcagaa attgtatcgt taaactctga agattctttt
     9481 ttcgacataa atgtggaata tggatcatct aatgaattga ccataccatt tattgctcca
     9541 tctatcatcg ttgtagattt tgtatcttta taatatttgc ttgtaatttc gtcgtataca
     9601 tcgtagagct tggtaaattc ttttcgttct ggaatgctca cttttacttg cttgtcatcc
     9661 cctaaagaca ttacgattgt agtcactaat gccgtcacaa aaacaaaagc gaatagtagc
     9721 attataaatg ggaataactt catttttata taaccattgc cgggttttgc tttttgttct
     9781 tcgtctttct ccacgttatt tggttcgttt tgtggggatt cttccatctt tcttcaccac
     9841 tttctatgta aaatgtggct agtaatagca cattttattt aactcattta ttttaccagt
     9901 tttccattca ttttggtatc tttttttcat gctacacaaa aaaggaggat tctggacaga
     9961 atcccccttt tcgcttttaa attaagctac ttcataacct gcttcttcca cagcatcaat
    10021 taacgcatct tctgtcactt gtcctttttc aaactcaaca gtagctgttc cttcatcaag
    10081 tgatactact gcacttttca cgccattaac ttctgataaa gcttttgtta cgcgagcctc
    10141 gcagtgagaa caagtcatac cttctacatt taatgttaat ttttccatgt taaattcctc
    10201 ctatgattta aatttatatc tttttaagcg aagtgcgttt gtgacaacag aaacggaact
    10261 aaatgccatc gcaagtcctg ctacccaagg ggcaagtaag cctagtgccg caattggaat
    10321 acccgcacag ttatatgcta gcgcccagaa aaagttttga cggatgtttc gcatggttgc
    10381 tttggaaagt tcgattgttt ctggaatgag tgttaaacga tgacttacaa gtgttacatc
    10441 tcctgtttca atcgcaatgt cagttccagt accgatacta atcccaatat cacttgccgc
    10501 aagagctgga gcatcattaa tgccatcacc aacgaatgca acgatatgac cgtcttgctg
    10561 taatttctcg actaaggcgc tcttatcatt tggtagttgt tcggcaaaga acatatcaat
    10621 acctaaatct ttagccatat tttctacgac aacagattgg tccccagaac aaattgctgt
    10681 tttaatacct tgtgctttta gtttttggat agcttctttt gcttctggtc gtggtgtgtc
    10741 agataaagcg agggcacctg cgtatacacc atcaattgcc attgctacga ctgtttttcc
    10801 tgcatgcatc caactttcga ttaattcatc atcttctttt ggaatcgttg taagggaaga
    10861 aacatagcgg taagcaccta gttccacttt actatcatcc agattaccgg tcatgccgtg
    10921 cccagctttc gcgcggattt tcccttgttt cactgcggaa gcatctatat tctctggctc
    10981 taacatctta ataatcgctt tcgcaatcgg atgctctgat tgttgttcca ttaagaataa
    11041 ataagggaaa aagtgatcat tggctgcttt tttatcactc acttctagtt taccttctgt
    11101 taaagtacca gttttgtcaa aaacgatagt atccactttg gaagtacgtt ctaaatgttc
    11161 gccaccttta aataatatcc cactttcggc gcctttacca gttccagcca tgatagcggt
    11221 tggcgttgca agaccaagcg cacagggaca ggcgataact aataccgcaa tcgcagcttc
    11281 aagtgaacca tccaccgttc cagtaacaag ataccaaata ataaaggtta cagcagcaat
    11341 cccaagtaca attggtacaa atatgccgga aattctatct gccaaacgtt gaattggcgc
    11401 tttaatacct tgcgcttctt ccaccaaacg aataatggat tctaaaacgg tttcttccat
    11461 tcgtttcgta atttttgctt ggaaagcccc gtcaaagtta atcgttgcgc caataacaga
    11521 atcgcctggt ttcttctcta ctggtacagg ttccccagta atcatcgctt catcaatact
    11581 cgtttcacca gaaataattt cggcatccat cggaactttt tcacccggac gaacaaggat
    11641 aatatcgcca attttcaatg aatctactgg cactaaccat tcttttcctt ctcgaataac
    11701 ggtcgcttct tttgcttgta attcaagtaa accagcaata gattcggttg ttctcgatgt
    11761 tgcgtatgat tcaagtaatt tacctaacaa gattaaggtg attaacacag cacttgtttc
    11821 aaagtagtaa tgcggcatca cgctcggatc aatcatgtga cgaatgtatt ccactacact
    11881 atagaaataa gcagcagaag tcccaagtgc gactaataca tccatatttg cacttttacc
    11941 tcgaagcgct ttataagccc catcataaaa ccgccaacca atataaaact gaacaatcgt
    12001 tgcgagtact aattggatgg ttggattaat ccagttacca atcgtttccg caaacgccat
    12061 ttcatgaatg tacggaatat gtgtcaccat ggtaagaagt aatggtaagg aaagaaccgc
    12121 cgaaagaata aaacgtctca cttctttttt gaaattcttt tctaacacag catctttttc
    12181 ttctttagac attttttccg ccgcgtcata acccgcatgt ttaacaactt taattaaatc
    12241 ttctgtcgat gtaacttccg ggtcgtaata tacggctgca ttttccgtta ctaagttgac
    12301 attcgctttt tctacaccat ccgctttatt taacgatttt tcaattctcg tggaacaggc
    12361 cgcacaagtc attccaaaaa tgtttaaatc ttgtcttaca tatttatcac tcatcgtata
    12421 tacccccctc aggttttcga aaattgacgt attgctttaa gtaagtcctc cattacgtca
    12481 tcttccccat tttttgctgc atctacaaca cagtgtgctg tatgatgttc tagtacttgt
    12541 aaaccaacat ttttgagcgc tttattcgct gctgaaattt gaactaaaat gtctgtacaa
    12601 tatctatcat cctcgaccat ttgagcgata ccgcggattt ggccttcgat acgtcgcaaa
    12661 cgattttgaa gtaatttcgt ttcatcttct ttgcgtggaa caattggttg atcgtgtttc
    12721 attttttctc ctcctttgtt tctacaatta acagtatacc ccctataggt attttatgca
    12781 accatttaat ttctgagaac aaaaaaaagc cataaacaaa tgcttgttta tggctcaaaa
    12841 tcttgttatt tcgcggcatc tactttcttt tgaagtgcct taacatgttc aaaaaattct
    12901 tctaaagtcc agttgttttc gtaaataatc gttgccgcat ccttaccaac ataacgataa
    12961 tgccaagatt catattgata cttcgtgata gcttctcgcc ctttcatata acgcaagata
    13021 aaaccataat tgtgggcatt ttcttgcaac catttgcctt caggagttgt tccgaatgct
    13081 tctgtgagtt catatgattg gttttctgat gagatatcca tcgctaaacc agtttgatgt
    13141 tcgctagtac ctggatacgc tactgcttct ctcgcttttt ggtcaccttt cgcatttact
    13201 tctgcttgga agacttcttg ctggcgtttg tacgatcgat aaccagatac ggcgaatagt
    13261 ttcttaccat ctttgttcgc agctacgaac atttcttcta atgcagttgc tgcttctttt
    13321 cttagctgtg ctttttcgac ttgttggctg ccaaaagaga atgtaacatt tggacgaacc
    13381 aagtcagggg gggtatatgt tggttgcaat gaataatctt tgttagctaa aaccaacata
    13441 ttttcctcat tttcaatata ctttatacca tctttttctg ttaatttatt ttgtttatca
    13501 atgtatggat aaagtggatc tttttctaat tccgcaagtg tttgattgcc tgacgatttt
    13561 tgctccactt tagcgatgga atcagcattt gtgccaccaa aatattgatc ttccactgtg
    13621 tggacacaac tgatgctaac agctaaagca attgttaata aagaactcat atctgtttat
    13681 caaccttcct gtatacatta agtctaattc taagttagta attaaaatta ttttattgct
    13741 gcttcaagtg ctacaacaat catatcattg aaagtagttt ggcgctcttc cgcggatgtt
    13801 tcttccccag tgaaaatatg gtcacttaca gttaaaatag ctaaagcacg acgaccatat
    13861 ttttgtgcta acgtataaag tgccgctgct tccatttcaa ttccaagcac accatagtct
    13921 gctaattgtt gtttgtctag ttgatcatta taaaaacggt ctgcagaaaa aacattccca
    13981 actttaagcg ataatccttt ttcgatacct gcatcatacg ctttttttag aagagaaaaa
    14041 tcagctactg gtgcaaaatc tacgccagca aaagtattgc gattaatttg cgaatccgtt
    14101 gatgccgctt gtgcaatgac aacatcacgt acttttacat ccgcttgaat gccgcccata
    14161 gtaccaacgc gaatcaagtt tttcacatca tagctttgaa ttaattcatt tacataaatc
    14221 gaaatagatg gaattcccat accagttccc ataacagaaa ctttttcgcc tttgtatgta
    14281 ccagtaaatc ctaacatgcc tcgcacttgg ttgaataaaa cgacatcttc caaaaatgtt
    14341 tccgcaatat attttgctct caatggatct cctggtaata aaatagtttc tgcaatttcc
    14401 ccttgttttg cttcgatatg tacgctcatc ttttttcctc ctagtgtttg tttttctctt
    14461 catctagcaa ataagcatcc caaagttcat caaaaataga cattcccggt aaatacggcg
    14521 cattaaactc cagataatca caaagaatat ggtagtttct tgtttgcttt ggaaaactat
    14581 gatctcggta tgcattgttg gcaaattccg ttttctgatc tgttagcttc gggtcccgat
    14641 atgtcattaa aaaatgataa aatgatcttc ccaacgtaca acacactccg ctctttttat
    14701 gctttaacta tagttgattt cctgaaaaaa ataaagttaa ttttcgattt tacgtagaat
    14761 ttcttctgca agtcgatgtg tttctaaggc atcttctttg gaaattggtg ctttttcccc
    14821 atttcgcacg gccgttaaga aggcttggat gatagataca aaacctcttt tgtaaagcgt
    14881 cgtttcccaa tctccaaaac gctcaaaccg ctctgttgtc ccttcataaa tatgcgtttc
    14941 cgtaacattt tctacttcat atttggcgct cggggtcatc actgctaatc gttcttcgtt
    15001 cacgccacta tctcggttca taatcgccgt tgccacttta cctcccgctg taatttgtac
    15061 cgttatactt gctagaaggt tctcttgcca taccggaacg acatgtaact gttctatttg
    15121 ggcatctagt aaaaaacgca cggtatcaat gacatgaata aaatcgtcat aaataaatgt
    15181 acgagcctca cccggttgcg ccgcgcgatt tttttgcata ataatcatgt tggtatctgt
    15241 taaggctttt aattcttgat attttggcgc gtaacggcga ttaaagccag tcataagtaa
    15301 cgtattttgt tcttcagcta ggcgtgttaa ttcttctact tcggataaat tgtcggcaat
    15361 tggtttatcc acataaactg gaatatgatt tgctagaaaa gtccggatta cttctgggtg
    15421 gcttgctgta gatgaatgaa caaacgctgc attcacgcca gactcaatca tagaatgaat
    15481 actttgatga taatgatcaa aacgatattt ctcacttaaa tgctttaatt tctgcgcatc
    15541 cctcgtgtaa agatgtacct cgatattttc catttcagca aaaactggca aatatgcttt
    15601 ttgtgcaatg ccgccaagcc ctactaccgc tatttttaac atgtgtatcg ctccttatca
    15661 caacaatgcc agagaatgat ttcgcgatat tattctacac atttcatttt ctggcatcat
    15721 gtgtttattc aaagattttc ttatatgctt ggtagccttc ttcttctaac ttatccacag
    15781 gtatgaatct gagcgctgcg gagttaatgc agtagcgaag tccaccctta tcttgtggtc
    15841 catctggaaa aacatgccct aaatgggaat cagcatcagc agatttcact tccgtccgaa
    15901 tcataccatg ggtcaaatct cgatgttcaa taacttctgc ttcatcaata ggcttagtaa
    15961 agctcggcca accacagcca gcatcgtact ggtcattgga tgaaaaaagc ggctttcctg
    16021 aaacgatatc tacataaatg ccttttgcct cattatcata aaattcattt tgaaatgggc
    16081 gttcggtacc cgctttttgg gtcacattat attgtatatc tgttagttgt tgaaggcgct
    16141 cgttcttttt actttcatcc atttgatttc accctttcca gttggcatct atgaatgcag
    16201 cacgacctga agcaacttga tatccctcat agtgcgcttt ttctttcttg taaaaatctt
    16261 gatgatattc ttcagcagga taaaatgttt ctgctttggc aatttctgtg acaatcggct
    16321 ttttaaatct accactcgca tcaagggctg cttttgattt ttcagcaatt tctttttgct
    16381 cttcattgtg gtaaaaaata actggtcgat acgaatcacc acggtcaaga aattggcctg
    16441 ccgcatcagt cggatcagtt tgttgccaat atacttcgac taatttctca tatggaaaaa
    16501 ctgccggatc aaatgtgatt tggattgctt ctgtatgtcc tgttgtcccg ctgcaaactt
    16561 ctttataggt tggattaacc gtatgaccac ccgtataacc tgaaataact ttttcaattc
    16621 ctggttgcgt gtcaaaaggt tttaccatac accaaaagca tcctccagca aatgttgctt
    16681 tttcaagtga ttcttttgtc ataaaaatgc cccctaacta ggattcagcc agccaaatta
    16741 cttaactggt actaaaagtg taaacgaaat gtcatctttc ttcaaattta gcgtatcagc
    16801 acgtactttt gtgccgcctt gcagttttag tttatctagg gaaaggtaga ttttttcctt
    16861 tttaggcata attgtcaccc aatcagggaa tttatagttt ttgcttacat agttcattac
    16921 gtaagacacg ggcagtggca aagcgccaac ggacatatct ttaagcgtca actcaacatt
    16981 gccattatcg acaacttccg gtgagaattt caagcgtagt tcgactggtt caccaaaaat
    17041 ttcagcttcg gcagtaaaat taacattatt tgcgacgaaa actttataac cgatatcttg
    17101 atctttgcta aaatcttcta tataagaact aatcaattgg tttaagtcag cttttgttgt
    17161 actcgtttga aattcaacca ttgatttatt gctaatcagg gatggcgtgg gttcatcttg
    17221 cgggctgagt ttgaatactg ctacataaat ccagccagca gaaattagaa gtacactaat
    17281 taatgtgata catacccatt tccaataatt acgttttggt ttttttggag ccgatcgtgt
    17341 ttctctctgc acgattttaa cacctttcta tttgggaata ttgccttcgt ttaattgttt
    17401 tacgatggct ttgtctaatt ccgatgtcat cttctcatat cctctatgat taggatggaa
    17461 ataatcatct gacagtagcg aattaggttt atctttatta tctgcatttc ggtcttctaa
    17521 aacttttgca ataggtacaa aataagcatt gctatcttgc tggatagttt tcttggaagc
    17581 tttattccaa tcagagataa tctcgtcaaa ttgtttgata tcgctgaaat aagttgtata
    17641 tggattgtaa atacccatta aaaatatcgc tgcatctttg ttataggacc gaatgtcttt
    17701 tagaagtgtc tctaactctt gttggaattc tttgtttgct tttgtaaaat catctacatt
    17761 tacatttaac agacgagatt gcaaaatagc catgacatca tttccgccaa tggtgattgt
    17821 tattacattc gcatttttga catcttcttg gaagtctttg tttgttttta aacgtttttc
    17881 gagttgggtt attttgtttc cagatacccc gtaattactc gtttttacgc ttggaatgtt
    17941 tgattcttct tctagttctt tagggataat gccgacatat ccgccccctt tgttttcatc
    18001 accaacacct tctgttaatg aatcacccat ggcaacgaga ttaatcggaa tttcttttga
    18061 ttctttataa tacttgatac caaaaactgc gccaacaaga agtgcgataa caagcacgct
    18121 ccctgtaagc cacagccatt ttttctttgt catatgcaat cactcactta gtcagtatag
    18181 tacataaatg caaacgcacc agttccagca tgtgtggaga taactgggtc tgcaaaaaat
    18241 agtggaattt ctgttaaacc ggttatttct tttgattcag cgatgaaatc atccgccaga
    18301 ttaagcccat ccgcatgaac aacgtctaga tgctgaattt ttttcggttc atctttaatt
    18361 aggtttaggc aatattgtaa tacttttttg ttgctgcgga ctttcgtttc ttcttccaat
    18421 tgtccgtcag ttaatttggc aattaatttg atatttaaaa gactaccgaa gaagccttgc
    18481 atccgtccaa cacgtccacc tttaattaaa ttatcgagtg ttacgacaac gatataaagt
    18541 tttgttttgt cacgaatatc attaattttt gcgtgaattt cctctacaga ataatcgccc
    18601 gactgagcca tttcagcagc ttttagtact tggaatgctt gcccacgagc tgtataatcg
    18661 cagtctacaa ccgtaatatt tccttctacc atatcagctg cttggcgagc cgcattgaca
    18721 gtaccactta gtttttcagt taagtggata gaaagaattt catagccttc agccgtatat
    18781 ttttcgtatg cttccacaaa agaaccaatc gcaggttgag aagattttgg taattctttt
    18841 gtttctgcca ttcgtaccat aaattcttct ggtgtaatgt ctgttttagg gttgtatatt
    18901 tgcccatcaa tttctacggt taaatataaa acatcaatat tccattttgc tgcttcttct
    18961 aatgttagtc cagcagttga atctgtgata atttttattt ttctcatata gccacatcca
    19021 gttttgctta ttttatc
//
LOCUS       DASDYO010000051        19032 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.051, whole genome shotgun sequence.
ACCESSION   DASDYO010000051 DASDYO010000000
VERSION     DASDYO010000051.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 19032)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 19032)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..19032
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.051"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..172)
                     /locus_tag="U0290_001464"
     CDS             complement(<1..172)
                     /locus_tag="U0290_001464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1146 domain-containing protein"
                     /protein_id="HEM2301508.1"
                     /translation="MYNIIMESPYVIIISHLLFIVITFWALQAINYEKFIKKNHVTQA
                     RLLFVIISIVLGY"
     gene            complement(294..698)
                     /locus_tag="U0290_001465"
     CDS             complement(294..698)
                     /locus_tag="U0290_001465"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit epsilon"
                     /protein_id="HEM2301509.1"
                     /translation="MGSLNVSIVTPDGPVYEGVAQMVIARTKAGELGILPGHVPLVAP
                     LKIDIVRLKVESGEEWVAVNGGFMEVNGEEVNILADTAEREQDIDIDRAEKAKQRAEE
                     ELSRAKEQKVDEVMAQLALQRAINRIHAKEHN"
     gene            complement(720..2141)
                     /gene="atpD"
                     /locus_tag="U0290_001466"
     CDS             complement(720..2141)
                     /gene="atpD"
                     /locus_tag="U0290_001466"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit beta"
                     /protein_id="HEM2301510.1"
                     /translation="MSKGQVIQVMGPVVDVKFEGGNLPEIYNALVIEYKSDAEEAPTS
                     QLTLEVAIQLGDDVVRTIAMASTDGVQRGMEVIDTGSPITVPVGTVTLGRVFNVLGNT
                     IDLDEPLPSDIKRNKIHREAPTFDQLATTTEILETGIKVVDLLAPYLKGGKIGLFGGA
                     GVGKTVLIQELIHNIAQEHGGISVFAGVGERTREGNDLYFEMKDSGVIEKTAMVFGQM
                     NEPPGARMRVALTGLTIAEYFRDEEHQDVLLFIDNIFRFTQAGSEVSALLGRMPSAVG
                     YQPTLATEMGQLQERITSTNVGSVTSIQAIYVPADDYTDPAPATTFAHLDATTNLERK
                     LTEQGIYPAVDPLASTSRALSPDIVGEEHYAVATEVQRLLQRYKELQDIIAILGMDEL
                     SDEDKQSVSRARRVQFFLSQNFHVAEQFTGQKGSYVPVKETVKGFKDLLAGKYDHIPE
                     DAFRSVGRIEDVLEKAKDMGVEV"
     gene            complement(2202..3074)
                     /locus_tag="U0290_001467"
     CDS             complement(2202..3074)
                     /locus_tag="U0290_001467"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466053.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit gamma"
                     /protein_id="HEM2301511.1"
                     /translation="MASLIDIKQRITSTRKTSQITKAMQMVSAAKLGRAESNARSYEP
                     YVSKIKDVVTHVASTGNSSDHPMLVSRPVHRTGYIVLTSDTGLAGSYNSSVIKEVFQE
                     INKKHTSSDEYAIITVGRSARDFFKARQMNVVLEVQGITDHPIFAEIKDIASNTVQMF
                     EDGVYDEVFIYYNHHINSISSELRKEQLLPLTEFHEKGKETDVDLTTYEFEPSEQEIL
                     EVLLPQYVESLIFGALLDAKAAEHAARMTAMRSATDNASDLISDLSLQYNRARQAAIT
                     QEITEIVGGAAALE"
     gene            complement(3112..4626)
                     /locus_tag="U0290_001468"
     CDS             complement(3112..4626)
                     /locus_tag="U0290_001468"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit alpha"
                     /protein_id="HEM2301512.1"
                     /translation="MSIKAEEISSIIKQQIENYQSELKVSDVGTVTYIGDGIARAHGL
                     DNAMAGELLEFSNGVMGMAQNLETNDVGIIILGPYTEIREGDEVRRTGKIMEVPVGEA
                     LIGRVVNSLGQPVDGLGPIETTGTRPIEAVAPGVMQRQSVNEPLQTGIKAIDALVPIG
                     RGQRELIIGDRQTGKTSVAIDTILNQADQDMICIYVAIGQKESTVRNAVETLRHHGAL
                     DYTIVVTAAASQPAPLLYLAPYAGVAMAEEFMYNGKHVLVVYDDLSKQAAAYRELSLL
                     LRRPPGREAYPGDVFYLHSRLLERAAKLNDSLGGGSITALPFVETQAGDISAYIPTNV
                     ISITDGQIFLQSDLFFSGVRPAINAGLSVSRVGGSAQIKAMKTVAGTLRLDLAAYREL
                     ESFSQFGSDLDAATRAKLERGKRTVEVLKQDLHKPLKVEKQVLILYALVHKYLDDVPV
                     HDVLRFESEMNTWFDHNHPELLEEIRTTKKLPDEAKLEAALKEFKNTFVPSEEK"
     gene            complement(4653..5192)
                     /locus_tag="U0290_001469"
     CDS             complement(4653..5192)
                     /locus_tag="U0290_001469"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit delta"
                     /protein_id="HEM2301513.1"
                     /translation="MSKDLEVAGRYANALFQVAQDKDLVDVFSEELTELKAALKANED
                     FVKLLENPTFTTEQKKNLASAVFEKINPTLRDFIYLLIDRSREDYLSVIADVYQKRVN
                     DLNGVADADVYSVVPLSEQELTALSRVFATKMNKTKLNIQNHIDKSLLGGVKVVIGTR
                     IYDDSLKTKLKDMERQIKA"
     gene            complement(5189..5701)
                     /gene="atpF"
                     /locus_tag="U0290_001470"
     CDS             complement(5189..5701)
                     /gene="atpF"
                     /locus_tag="U0290_001470"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit B"
                     /protein_id="HEM2301514.1"
                     /translation="MLQPHLVIGSAFTFGDAFFTLFAFAILLVLIRIYAWKPLMGVMK
                     EREEHIGSEIDAAEESRAQAEQLLAEQKSVLQQARVESQTMIENAKQLGEKEREEIVK
                     TARRESERIKEEAKSDIAREKEDAISALREQVGSLSVLIASKVIEKNLDEKEQSNLIQ
                     DYIERLGDDK"
     gene            complement(5789..6007)
                     /gene="atpE"
                     /locus_tag="U0290_001471"
     CDS             complement(5789..6007)
                     /gene="atpE"
                     /locus_tag="U0290_001471"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit C"
                     /protein_id="HEM2301515.1"
                     /translation="MSLGVIAAAIAVGLGALGAGIGNGLIVSKTVEGVARQPEARSML
                     QTIMFIGIGLVEALPIIAVVIAFMVLNK"
     gene            complement(6079..6795)
                     /gene="atpB"
                     /locus_tag="U0290_001472"
     CDS             complement(6079..6795)
                     /gene="atpB"
                     /locus_tag="U0290_001472"
                     /EC_number="7.1.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="F0F1 ATP synthase subunit A"
                     /protein_id="HEM2301516.1"
                     /translation="MEEEFPTISLLGIDFNLSNILMITVTCVIVLLIAIICTRNLQRR
                     PTGKQNFIEWVMDFVRGIINSNMDWKTGGRFHVLGITLLMFIFVANMLGLPFQIAIND
                     EVWWRSPTADPIVTLTLAIMVLGLTHYYGIKMRGFKHYFVGTYFSPMKFLFPLKLVEE
                     FANTLTLGLRLYGNIFAGEVLLTIIATQLAHMNIFVGVLAIIPALLWQGFSIFIGAIQ
                     AYIFTMLTMVYMSHKVSDEH"
     gene            complement(6802..7200)
                     /locus_tag="U0290_001473"
     CDS             complement(6802..7200)
                     /locus_tag="U0290_001473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP synthase subunit I"
                     /protein_id="HEM2301517.1"
                     /translation="MLESLIGMYHRHQKYMVLFIAVCLCGWFLTPYIHIFLGLKLGLI
                     VGWFNYWLLMRRTQSMTRALAENRSFYGMGMPFRMGSVLFATIIATQLPEFFHVYSMV
                     IGLGLAYAIIFLDFFVYSMYRRKKFLKREG"
     gene            complement(7394..7561)
                     /locus_tag="U0290_001474"
     CDS             complement(7394..7561)
                     /locus_tag="U0290_001474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301518.1"
                     /translation="MTEVLVAVKWTKIILAWQSKKQIDFEIKKISKIIGYSFMDGSDC
                     GTISNRCTYNL"
     gene            complement(8031..9170)
                     /gene="wecB"
                     /locus_tag="U0290_001475"
     CDS             complement(8031..9170)
                     /gene="wecB"
                     /locus_tag="U0290_001475"
                     /EC_number="5.1.3.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine 2-epimerase
                     (non-hydrolyzing)"
                     /protein_id="HEM2301519.1"
                     /translation="MAKIKVMSIFGTRPEAIKMAPLVLALEKEPETFESTVVITAQHR
                     EMLDQVLEIFDIKPDIDLDIMKKGQTLAEITSRVMNGINEVIAAENPDIVLVHGDTTT
                     SFAAGLATFYQQKMLGHVEAGLRTWNKYSPFPEEMNRQLTGVMADMHFSPTKQAKENL
                     LAEGKDPGTIFVTGNTAIDALRTTVQKDYHHPILENLGDNRLILMTAHRRENLGEPMQ
                     GMFEAVREIVESREDVELVYPMHLNPAVREKATKILGGHERIHLIEPLDAIDFHNFLR
                     KSYLVFTDSGGVQEEAPGMGVPVLVLRDTTERPEGIEAGTLKLIGTNKENLIKEALNL
                     LDNKENHDKMAHAVNPYGDGFAANRILAAIKSHFEETGRPEDFIV"
     gene            complement(9288..9917)
                     /gene="upp"
                     /locus_tag="U0290_001476"
     CDS             complement(9288..9917)
                     /gene="upp"
                     /locus_tag="U0290_001476"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil phosphoribosyltransferase"
                     /protein_id="HEM2301520.1"
                     /translation="MANVHVINHPLVQHKLTIIRDKNTGTKAFRELVDEVATLMAYEI
                     TRDMELEDIQVETPLQTTTAKTLTGKKLGIVPILRAGLGMQDGILKLIPAAKVGHVGL
                     YRDHDTLEPVEYFVKLPSDVEERLFIVVDPMLATGGSAIMAIDCLKKRGARNMKFMCL
                     VAAPEGVKALQDAHPDVEIYVAGLDEKLDENGYIRPGLGDAGDRLFGTK"
     gene            complement(10055..11296)
                     /locus_tag="U0290_001477"
     CDS             complement(10055..11296)
                     /locus_tag="U0290_001477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydroxymethyltransferase"
                     /protein_id="HEM2301521.1"
                     /translation="MVYLQKQDKEVFDAIKLELGRQRANIELIASENFVSEQVMEAMG
                     SVLTNKYAEGYPGKRYYGGCEFVDIVEDLARDRAKKLFGAEYANVQPHSGAQANMAVY
                     HTVLEPGDTVLGMNLSHGGHLTHGSPVNFSGVLYNFVEYGVREDTKEIDYDIVREAAL
                     KHKPKMIVAGASAYPRKIDFAKFREIADEVGAYLMVDMAHIAGLVAAGLHQNPVPYAD
                     FTTTTTHKTLRGPRGGMILAKAEWEQKLNKSIFPGIQGGPLMHVIAAKAVAFGEALQP
                     EFTAYCEQIIRNSKKLAETLQANDVAVLTGGSDNHLLLIDLKPLGLTGKAAEKVLDEV
                     GITVNKNTIPFETESPFVTSGIRVGVAAVTTRGFDEVAIEKVGVLISEVLHNLENEEV
                     LADVKARVATLTNEYPLYPSL"
     gene            complement(11432..11839)
                     /locus_tag="U0290_001478"
     CDS             complement(11432..11839)
                     /locus_tag="U0290_001478"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight protein arginine
                     phosphatase"
                     /protein_id="HEM2301522.1"
                     /translation="MKVLFVCTGNTCRSPLAEKILQNLRPDLDVRSAGTRALDGDAIS
                     ENSRQILAQMNLPTTHQAKKVKKADIDWADQIYVMTQNHQAELKSLFPKASDKIQLIS
                     EDKTDIPDPYGGSIEQYEITYYELKSAISERFL"
     gene            complement(11836..12873)
                     /locus_tag="U0290_001479"
     CDS             complement(11836..12873)
                     /locus_tag="U0290_001479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonylcarbamoyl-AMP synthase"
                     /protein_id="HEM2301523.1"
                     /translation="MQTIHWNINNQQSNQVIFQEAAKLLRSGECVAFPTETVYGLGAD
                     ATNQAAVQKIYEAKGRPSDNPLIVHIARREQMDPFVASYPVKAIQLMEKFWPGPLTVI
                     LPLKKDSLATNVSAGLSTVGVRMPEHPVSLALIDAANIPVAAPSANRSGKPSPTTASH
                     VIEDLDGKIAGIIDGGATGVGLESTVIDCSLDIPVILRPGGVTKEQIEQIIGPVDIAT
                     NNTKETEKPKAPGMKYTHYAPKAPVYLIEGSIQFWQSEINKAEAANKKLGILATKELI
                     NQLNTSGTIEITGSINALDEIATSLYKGLRAFDHADVDVIFAEVYPETELGAAIMNRL
                     EKAAGNRRIRE"
     gene            complement(13174..14025)
                     /gene="prmC"
                     /locus_tag="U0290_001480"
     CDS             complement(13174..14025)
                     /gene="prmC"
                     /locus_tag="U0290_001480"
                     /EC_number="2.1.1.297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor N(5)-glutamine
                     methyltransferase"
                     /protein_id="HEM2301524.1"
                     /translation="MTQISQLLKNAEAILLEKGLDQNAAEILLETRMGLSRSELWMEI
                     SRELEPNHEKQFEEDFARYLAGEPVQYILKTAPFYGYDFLVTEDVLIPRPETEELVAC
                     AEDFLKKHPVKNVLDVCTGSGIIAIALKKAFPDISMTASDISAPALAVAKKNALLLNA
                     DVRFVETDLLEAFKQNEERFDMIVANPPYISEAEKAEMSDYVLKNEPSLALFAENDGL
                     AIYERFVDNLQYVLNSSFWVGVEIGYTQGERVKQLFEKSYPHSTVIIHKDINSKDRYV
                     TCSNILV"
     gene            complement(14012..15088)
                     /gene="prfA"
                     /locus_tag="U0290_001481"
     CDS             complement(14012..15088)
                     /gene="prfA"
                     /locus_tag="U0290_001481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 1"
                     /protein_id="HEM2301525.1"
                     /translation="MYDRLQAVEDRYDELNELLSDPDVVSDPKRLRDLSKEQSGITAT
                     VETYREYKNVNEQINETKELLGEKLDDEMREMAKEEFAELQKEKADLEERLKLLLVPK
                     DPNDDKNVILEIRGAAGGDEAALFAGDLFRMYSKYAESRGWKVEIMDANPTGIGGYKE
                     IIAMMNGNDAFSRMKYENGAHRVQRVPETESGGRIHTSTATVAILPEAEEVEIELHDK
                     DIRTDTFASTGAGGQSVNTTMSAVRLTHIPTGIVVSMQDERSQLKNKDKAMKVLRARV
                     YDKFEREAREEYDANRKSAVGTGDRSERIRTYNYPQNRVTDHRIGLTIQKLDQIMEGK
                     LDEIIDALILEDQTSKLEHLNDAN"
     gene            complement(15111..15686)
                     /locus_tag="U0290_001482"
     CDS             complement(15111..15686)
                     /locus_tag="U0290_001482"
                     /EC_number="2.7.1.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thymidine kinase"
                     /protein_id="HEM2301526.1"
                     /translation="MAQLFFRYGSMNSGKTIEILKVAHNYEEQNKTVAIFTSGIDDRD
                     QVGFISSRIGLKREATPIFSDTNIFEIVANIKPKPNCVLLDESQFLEKEHVFQLAKIV
                     DELNIPVIAYGLKNDFRNELFEGSKYLLLYADKLEEMKTICWFCAKKATMVLRVDDKG
                     KPVYTGEQIMIGGNDHYYPVCRKCHANPPIK"
     gene            complement(15798..16664)
                     /locus_tag="U0290_001483"
     CDS             complement(15798..16664)
                     /locus_tag="U0290_001483"
                     /EC_number="2.7.1.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine kinase"
                     /protein_id="HEM2301527.1"
                     /translation="MRIRVPATTANLGPGFDSCGLALTLYLTLDIGAEADSWYIEHNI
                     GGGIPHDETNVIIETALNLAPNLTPHHLVMTCDIPPARGLGSSSAAVVAGIELANTLA
                     ELNLSKEEKVRIAAEIEGHPDNVAPAVLGNWVVGAKLDGEDFYVRHLFPDCALIAFIP
                     KAELLTSESRGVLPDTLPFKEAVQASSIANVMIAAILRNDMALAGEMMERDLWHEKYR
                     SQLVPHLTQIRDVAKSQGAYAACLSGAGPTVLVFAPRNLANTLQTSLQTLEIDADVLL
                     LDVEGSGAEVFR"
     gene            complement(16664..17719)
                     /locus_tag="U0290_001484"
     CDS             complement(16664..17719)
                     /locus_tag="U0290_001484"
                     /EC_number="4.2.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine synthase"
                     /protein_id="HEM2301528.1"
                     /translation="MYKGLLEKYKEYLPVTDKTPMISLAEGNTPLIPLPNLSKELGVT
                     LYGKYEGLNPTGSFKDRGMVMAVAKAKEEGAEAVICASTGNTSAAAAAYATRAGLKAY
                     IVIPEGKVALGKLAQAVMYGADIISIQGNFDEALKSVRELAETEAVTLVNSVNPYRLE
                     GQKTAAFEICEQLGSAPDVLAIPVGNAGNISAYWKGFKEWNEAKASGLPRMHGFEAEG
                     AAAIVQGKPIDNPETIATAIRIGNPASWELAEAARDESGGYIHSVTDDEIVNAYKKIA
                     AQDGVFIEPGSAASLAGVIQHVANGTIKKGETVVCVFTGNGLKDPDTAMSVHEIPISH
                     VDDIEAMRTHLRSGVKA"
     gene            complement(17722..19008)
                     /locus_tag="U0290_001485"
     CDS             complement(17722..19008)
                     /locus_tag="U0290_001485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine dehydrogenase"
                     /protein_id="HEM2301529.1"
                     /translation="MEAKLQVGVLGFGTVGSGVIHILEEHQEKISQVTGYHISVKKVL
                     VRDLEKNRRYETKGFELTTNPSDVLDDPEIAVVVEVMGSITTAREYILQALKAGKHVV
                     TANKDLIALHGDELVAVAQANNCDLFYEASVAGGIPILRTIVNSLAADKIQKVMGIVN
                     GTTNFMLTKMTTEKKSYEDVLAEAQALGFAESDPTNDVDGIDAARKMVIMTRLAFGMN
                     VNLDNVETNGIRGISPEDIDVAYQLGYKIKLVGTAEETNGTVNVNVGPVLLPKAHPLA
                     GVNYENNAVFVTGAAVGETMFYGPGAGELPTATSVVSDLITVAKNSRLGTNGNAFNSY
                     KHETKHTPKEQVFSKYYLRLTMDDKTGTFLKLTQIFAEAGVGFDKILQQPYDDFTATV
                     VIVTHSTSQAQLEQAIARVKDEPEMQMLAKYSVVEG"
BASE COUNT         5357 a         4097 c         3415 g         6163 t
ORIGIN      
        1 tataacctaa tacaatcgaa ataatcacaa ataataatct agcttgtgtt acatgattct
       61 tcttgatgaa tttttcataa ttaatagctt ggagtgccca aaaagtaatt acaataaata
      121 gtaaatgtga aatgatgatg acatatggtg attccataat aatattatac atacgttctc
      181 tcctcatatt tcgctactac tcattttaac aaatacctct agaaaaaaac agttaataca
      241 cttatgcata taaaaaaact tcccggcact gtggccagga agtaatatga ttattaattg
      301 tgttcttttg catgaattct gttgatggct ctttgtagtg ccagctgagc cattacttcg
      361 tccacttttt gttcttttgc tcggctaagt tcttcttctg cacgttgttt tgctttttca
      421 gcgcgatcaa tatcaatatc ttgttcacgt tcagcagtat ccgcgagaat attaacttct
      481 tcaccgttta cttccataaa gccaccattg acagcgaccc attcctcacc agactcaact
      541 tttaaacgaa cgatgtcgat tttaagtgga gcaactagtg gaacatggcc aggtaaaata
      601 ccgagttcac ctgcttttgt tctagcaata accatttgag caacgccttc ataaacaggg
      661 ccgtctggag taacaatact aacatttaat gaacccatac gtatttcctc ctgtttttat
      721 cagacttcaa cgcccatgtc ttttgctttt tcaagaacat cctcaatgcg tccaactgaa
      781 cggaatgcat cttcaggaat atggtcgtat tttccggcta ataggtcttt gaatccttta
      841 actgtttctt taacaggaac ataagaacct ttttgacctg taaattgttc tgcaacgtgg
      901 aaattttgtg ataagaagaa ttgtacacga cgcgcacggg aaacggattg tttatcttcg
      961 tcagataact catccatacc taagattgcg atgatatctt gtaattcttt atatctttgt
     1021 aataaacgct gtacttccgt tgctactgca tagtgttctt ctccaacgat atcaggagaa
     1081 agcgcacgag atgtagaagc aagtggatct accgctggat aaataccttg ttccgttaat
     1141 ttacgttcca agttagttgt tgcatctaga tgggcgaaag ttgtagccgg agccgggtca
     1201 gtatagtcat cggctggtac ataaatcgct tggatagaag taacagatcc aacgttagta
     1261 gatgtaatac gttcttgtaa ttgacccatt tcagtagcta gggttggttg gtaacctacc
     1321 gcagatggca tacgacctag taaagccgaa acctctgaac cagcttgtgt gaaacggaaa
     1381 atattatcaa tgaataaaag tacatcttga tgttcttcat cacggaaata ttcagcaatt
     1441 gttaaaccag ttaaggcaac acgcatacgc gcacctggtg gctcgttcat ttgaccgaat
     1501 accatcgctg ttttttcaat aacaccagaa tctttcattt caaagtaaag gtcgttccct
     1561 tcacgagtac gttctccaac gcccgcgaac actgaaatac caccgtgttc ttgtgcgata
     1621 ttatggataa gctcttgaat tagaacggtt ttacctacac ccgcaccacc gaacagtccg
     1681 attttaccac cttttaggta tggcgctaac aagtcaacta ctttaattcc tgtttcaaga
     1741 atttctgttg ttgttgctaa ttgatcgaaa gttggagctt cgcggtgaat tttgttacgt
     1801 ttaatatcgc ttggaagtgg ttcgtccaaa tcgatggtgt ttcctaatac attaaataca
     1861 cgaccaagag ttactgtacc tacaggaact gtaattgggc tcccagtatc aataacttcc
     1921 atacctcttt gaacaccatc tgttgatgcc attgcgattg tacgaacaac gtcatcacct
     1981 aattggatgg ctacttctaa agtaagttgg ctagttggtg cttcttctgc atcagattta
     2041 tattcaataa ctagggcatt gtagatttca ggtaagtttc caccttcaaa tttaacgtct
     2101 acaactggac ccataacttg gattacttgt cctttagaca tgcaattatt cctcctcact
     2161 taccttccca tttatcggga cgttacaaga aacgccgact tctattctag tgcggctgct
     2221 cctccgacga tttcggtaat ttcttgcgtg atcgcagctt ggcgagcacg gttatattgt
     2281 agtgataagt cactgattaa atcggatgca ttgtctgtcg cgcttctcat ggcagtcata
     2341 cgagcagcat gttcagcggc tttggcatcc agaagtgctc cgaaaattag gctttccaca
     2401 tattgcggca ataatacttc cagaatttct tgttcggaag gctcgaattc gtatgtagtt
     2461 aaatctacat ctgtttcctt acctttttcg tgaaattctg tcagtggtag tagttgctct
     2521 tttctcagtt cgctagaaat agaattaata tggtgattat aataaatgaa aacctcgtca
     2581 taaacaccat cttcaaacat ttgaactgtg ttactagcaa tatctttaat ttccgcaaat
     2641 atcgggtgat ctgtaatgcc ttgtacttct aaaaccacgt tcatttggcg cgctttgaag
     2701 aagtctcgag cagatctacc tacagtgatt attgcatatt catcacttga cgtatgcttt
     2761 ttattaattt cttgaaatac ttctttgatt acagaactat tgtaagaacc tgcaagtcca
     2821 gtatcagaag taagtacgat ataaccagta cggtgaacag gtctagatac aagcattgga
     2881 tgatcactac tgttaccagt gctagcaaca tgtgttacta cgtctttaat tttagaaacg
     2941 taaggctcat atgaacgagc gtttgattct gcacgaccta gttttgctgc tgaaaccatt
     3001 tgcattgctt ttgtaatttg acttgtttta cgtgtagaag ttattcgttg tttaatatcg
     3061 attaaagatg ccaaagattt tcaccacctt tgaatttatt ccgagtctaa attatttttc
     3121 ttcagaagga acaaatgtat ttttaaattc tttcaatgct gcttcaagtt tcgcttcgtc
     3181 aggaagtttt ttcgttgtac gaatttcttc caaaagctct gggtgattat gatcaaacca
     3241 tgtattcatt tcggactcaa aacgcagtac atcatgaact ggtacatcat ccagatattt
     3301 atgaacaagt gcataaagaa tcaatacttg tttttcaact ttcaaaggtt tgtgcaaatc
     3361 ttgttttaga acttctactg tacgtttacc acgttctagt ttcgcacgag tagctgcatc
     3421 taggtcagag ccgaattgtg agaaggattc tagctcacgg taagcggcaa ggtctagacg
     3481 aagtgttccg gcaacagttt tcattgcttt aatttgcgct gatccaccta cacgagatac
     3541 agaaagaccg gcattgatcg ctggacgtac tccggagaag aataaatcag attgcaagaa
     3601 gatttgtccg tctgtaatcg agataacgtt tgtaggaata taagcagaga tatctccggc
     3661 ttgtgtttct acgaatggaa gagccgtaat ggatccgcca cctaagctat catttaattt
     3721 tgcagcacgt tcaagtaaac gggagtgcaa gtagaaaaca tcccctggat atgcttcacg
     3781 gcctggagga cgacgaagta atagagacag ctcacgataa gcggctgctt gtttggataa
     3841 atcatcatat acgactaaaa cgtgtttgcc gttgtacatg aattcttctg ccattgcaac
     3901 accagcataa ggagccaagt atagaagtgg cgctggttga gatgctgctg cagttacgac
     3961 gattgtgtaa tctaatgcgc cgtgatgacg taatgtttct acggcattac gtacagtaga
     4021 ttctttttga ccgatagcaa cataaataca aatcatgtct tggtcagctt ggtttagaat
     4081 agtatcaatt gctacagatg ttttaccagt ttggcggtca ccgatgatta actcacgttg
     4141 accacgacca attggaacaa gtgcatcaat cgctttaata cctgtttgta atggttcatt
     4201 tactgattga cgttgcataa caccaggtgc tactgcttca atcggacgag ttccagttgt
     4261 ttcaataggt cctaaaccat caactggttg acctaatgag ttaactacac gcccaataag
     4321 cgcttcgcca acaggaactt ccatgatttt accggtacga cgaacttcat cgccttcacg
     4381 gatttcagtg taaggaccta gaataatgat accaacatca tttgtttcta agttttgggc
     4441 catacccatt acaccatttg agaactctaa caattcacca gccattgcat tatcgagtcc
     4501 atgagcacgc gcaataccgt caccaatgta ggtaaccgta ccaacatcac tcacttttag
     4561 ttcagattga taattttcaa tctgctgttt tatgattgag ctgatctctt cagccttaat
     4621 gctcattgat ttcacccctc gttaaacgga aactaggctt taatttgccg ttccatgtcc
     4681 tttaatttcg tttttagact gtcatcatat atacgggttc caataaccac tttgactcca
     4741 ccaagaaggg atttatcaat gtgattttga atgtttaact ttgttttgtt cattttcgta
     4801 gcaaatactc tcgagagcgc cgtaagttct tgttcggaaa gtggaacaac agaataaaca
     4861 tctgcatccg caactccatt caagtcgttt acgcgttttt ggtaaacgtc cgcaataaca
     4921 gaaagataat cttctctgct acggtcaatt aaaagataaa taaaatctct taatgtcgga
     4981 ttgatttttt caaaaacagc gctggcaaga tttttctttt gctcggtcgt gaaagtagga
     5041 ttttcaagta gttttacaaa atcttcatta gcttttaagg ccgcttttaa ttcagttagt
     5101 tcttctgaaa aaacgtcgac taaatcttta tcttgggcta cttgaaaaag cgcattggca
     5161 tagcgacctg caacttccaa atctttactc atttgtcatc ccctagcctt tcgatataat
     5221 cttggataag gttagattgt tctttttcat ccagattttt ttcgatgact ttcgatgcaa
     5281 taagaacaga taaggaaccg acttgttcgc gaagagcaga aatagcatct tctttttcac
     5341 gtgcaatatc ggattttgct tcttctttta tacgttctga ttcacgtcta gcagttttga
     5401 caatttcttc gcgttctttt tcaccaagct gttttgcatt ctcaatcatt gtttgagatt
     5461 ccacacgagc ttgttgtaaa acactttttt gttcagcaag taattgttct gcttgagcac
     5521 ggctttcttc cgccgcatca atttcagaac caatatgctc ttcacgctct ttcataactc
     5581 ccataagagg tttccaagca taaattcgga ttaaaactag caaaatcgcg aaagcaaaaa
     5641 gtgtgaagaa tgcatcacca aacgtaaatg cggaaccaat tactaaatgt ggttgtaaca
     5701 cgccagtttc actcctttct atacattcgc ttgaattatt cgttcaaaac gaaagagatg
     5761 aggttttatt tcctcaactt ccttcaaatt atttattaag aaccatgaac gcaataacta
     5821 cagcgatgat aggaagggcc tcaacaagac cgataccaat gaacatgatt gtttgtagca
     5881 tagaacgcgc ttctggttga cgcgcaacac cctcgacagt ttttgatacg ataagaccgt
     5941 taccaatacc cgcacctaat gcacctaatc caacagcgat agcagctgca ataacaccta
     6001 aagacatata attatcctcc taatttttct aaatattatt ttttattact tttataaatg
     6061 acttatttga aagttagttt aatgttcgtc acttacctta tgcgacatat aaaccatggt
     6121 cagcatagtg aaaatgtacg cttgaattgc cccaatgaaa attgagaatc cttgccatag
     6181 taacgcagga attattgcta gcacacctac aaatatgttc atatgagcga gttgtgttgc
     6241 aatgatggtt aacaaaactt cgccggcgaa aatattaccg taaagacgta aaccaagcgt
     6301 taaagtatta gcaaattctt ctactaattt aagtgggaat aaaaatttca ttggactaaa
     6361 gtaagtacca acaaaatagt gcttgaaacc acgcatttta ataccatagt aatgcgttaa
     6421 gccaagaacc attatcgcaa gtgttaatgt gacaattgga tccgctgtag gtgaacgcca
     6481 ccatacttca tcgttaatcg cgatttgaaa tggcagtcct agcatattag ctacgaaaat
     6541 aaacattagt agcgtaatac caagtacatg gaatctccca ccggttttcc aatccatatt
     6601 actattaata atacctctga caaaatccat aacccattca atgaagttct gctttccggt
     6661 aggtcggcgt tgcagatttc tggtacagat aatggctatt agaagaacga tgacacaagt
     6721 cacagtaatc atcaaaatat tagatagatt aaagtcgatc cctaataggc ttatcgttgg
     6781 aaattcctct tccaattagg ttcacccctc tctttttaaa aacttttttc tgcggtacat
     6841 ggaatacaca aaaaaatcta gaaaaataat tgcatatgca agcccaagtc cgattaccat
     6901 gctataaaca tgaaaaaatt ccggcagttg cgtcgctata atagtagcaa ataacacgct
     6961 ccccattcta aatggcattc ccataccata aaaagaacga ttttcagcca aagctctagt
     7021 cattgattgt gtacgcctca ttaatagcca gtagttaaac cagccgacga ttaaacccaa
     7081 cttaagtccc aagaaaatat gtatatatgg ggttaaaaac catccacaaa gacaaacagc
     7141 aataaaaaga accatatact tttgatgacg atgatacatg ccaattagcg attctaacat
     7201 tcggggcgca atcctttctt tttcaaaaga tttttctttc cagatgacca ttttgaaatc
     7261 tcagggagta agtttggttt gtgaaaacaa gcacattttc cccaattcat cccaatccca
     7321 aacacacatg aaagccttat cagcgtgtca gttcttagca tacaacagcc aaaagagaaa
     7381 agtcaataca ctttcacaaa ttgtaagtac atctattact aatagtacca caatcggacc
     7441 catccataaa agaatagcct attatttttg agattttttt gatttcaaaa tctatctgtt
     7501 tcttagattg ccacgccaga attatttttg tccatttaac agcaaccaac acctccgtaa
     7561 tcgttgagaa aacctatctc ctgttcgtgt gatgtttcac aaaaaaggcg ataaaaactc
     7621 tctttcgcac aaataaaaaa acttctacca ctattggtaa aagaattcga tacgattatt
     7681 cgcaaatttc gcgaccgaaa gttcttttcc caagaaaaag aacggaaaaa acagccggac
     7741 tcatttatca tgagttgcat tttgatatag agtgcccgta taaattccaa ttcagtcaac
     7801 gcaaacctag cgtcggcggg attgtagtga atactgagcg cagtcttcta tccctatgct
     7861 aaaaacaagc tattttttgg gctcttatat taataacatt gaccatctta tcacatgtaa
     7921 cataaaagaa ctagtgaaaa tcgagcgtgt aacatatctg taacaataag gcgctttcat
     7981 tctgaaaaaa gaggaaaact agacttcaac gcctagtttt ccactgtgtt ttacacgata
     8041 aaatcttctg gtcgaccagt ttcttcaaag tgactcttga ttgctgctaa aattcgatta
     8101 gctgcgaatc cgtcgccata tggatttacc gcgtgtgcca ttttatcatg attttcttta
     8161 ttatccagca aattcagtgc ttctttaatt agattctctt tatttgttcc aattagtttc
     8221 aacgtcccgg cttcgattcc ttctggacgc tccgtcgtat cacgtaaaac taaaactggc
     8281 acgcccatgc ctggagcttc ttcttgtacg ccgcctgaat cggtaaaaac aagataagac
     8341 ttgcgcaaga aattatgaaa atcaattgcg tcgagtggct cgattaaatg aatgcgttca
     8401 tgtccaccta agattttcgt cgctttttct ctaacggctg gattcaaatg catcggataa
     8461 acgagttcaa catcctcacg actttccacg atttctcgaa ccgcctcaaa catcccttgc
     8521 atcggttcgc ctaaattttc cctgcggtga gccgtcataa gtattaaacg attgtcgcca
     8581 agattttcca agattggatg gtggtaatct ttttgcacag ttgttctaag ggcatcaatc
     8641 gccgtatttc cagtcacaaa aatagtaccc ggatcttttc cttccgcaag cagattttct
     8701 ttcgcttgtt tagttggaga aaagtgcata tccgccatta caccagttaa ctggcgattc
     8761 atttcttctg gaaacggcga atatttattc catgttctaa gtccagcttc gacatgtccg
     8821 agcatttttt gttgataaaa ggtagctagt cctgctgcaa aacttgttgt tgtatcgccg
     8881 tgaactagaa cgatatccgg attttcggct gcaataactt cattaattcc attcattaca
     8941 cgcgaagtta tttcagctaa agtttggcct tttttcataa tatctaagtc aatatctggt
     9001 ttaatatcaa aaatctctaa gacttgatct agcatttcac ggtgttgagc tgtaatcact
     9061 accgttgact caaatgtttc tggttctttt tctagtgcca aaacgagtgg tgccattttt
     9121 attgcttctg gtcttgtccc aaagatactc attactttga ttttagccaa ttgcgaacct
     9181 ccttataaaa aaactcctca gaaatagctc gacaaaaaat ttcccagcct gttaaaaagc
     9241 agtactgttt ataattcctt atctcactaa accgaggaga ttgttaatta tttagttccg
     9301 aataatctat cgccagcatc tcctaagcct ggacggatat aaccattttc gtctaacttc
     9361 tcgtctaaac cagctacgta gatttctacg tctggatgtg cgtcttgaag ggctttaacg
     9421 ccttcaggag ctgctactag acacatgaat ttcatgttac gagcgccgcg ttttttcaag
     9481 caatcgatag ccataattgc ggatccgcca gttgcaagca ttggatctac aacgatgaaa
     9541 agacgttctt ctacgtcaga aggtagtttt acaaaatatt cgactggttc tagtgtatca
     9601 tggtcacgat aaagacctac atgccctact tttgctgcag gaataagttt taaaatacca
     9661 tcttgcatac caagtccagc tcttaaaata ggaacaatcc ctaatttttt accagtaagt
     9721 gttttcgcag ttgttgtttg tagtggtgtt tctacttgga tgtcttcgag ttccatatca
     9781 cgtgtaattt cgtacgccat taatgtagcg acttcatcta caagttcgcg gaatgctttt
     9841 gttcccgtat ttttatctcg aatgattgtt aatttgtgtt ggactagtgg gtgattaatt
     9901 acgtgtacat ttgccattga ttagttcgct cctttgatat tgaaaatttc cttctcttat
     9961 tgtatcagaa caagacacaa gtgcaaggat taatttgcta tacatgaaaa aaaccggttt
    10021 tctctatttt atagaaaaaa ccggatcact tattttataa acttggataa agcggatatt
    10081 catttgttaa agtagccacg cgtgctttta catctgcgag aacttcttca ttttctaaat
    10141 tatgcagtac ttctgaaata agtacaccaa ctttttcaat cgcaacttca tcaaatccac
    10201 gagtggtcac tgcagcaaca cctacacgga taccacttgt gacaaatggg ctttccgttt
    10261 cgaatggaat ggtattttta ttcacggtaa taccaacttc atctaatact ttctccgctg
    10321 cttttcctgt taagccaagt ggttttaaat caattaataa taaatgatta tccgaaccac
    10381 ctgttaaaac agcaacatca ttcgcttgaa gtgtttctgc taatttttta gagttacgaa
    10441 taatttgttc acagtacgcc gtgaattcag gttgtaacgc ttcaccaaac gccactgctt
    10501 tcgctgcgat tacgtgcatt aacggtccac cttggattcc tgggaaaatc gatttattta
    10561 atttttgttc ccattctgct ttggctaaaa tcattccgcc gcgaggtcca cgaagcgttt
    10621 tatgggtagt tgtcgttgta aaatcagcat aaggaactgg attttgatgc aagccagcag
    10681 caacaagacc agcaatatgc gccatatcta ccattaagta tgcgccaact tcatcagcaa
    10741 tttcgcggaa tttagcaaaa tcaattttac gtggataagc acttgcgcca gctacaatca
    10801 tttttggttt atgttttaaa gctgcttcac gaacaatatc gtaatcaatt tctttcgtat
    10861 cttcacgaac gccgtattca acaaaattgt ataaaacacc gctgaaattt actgggctac
    10921 catgtgttaa atgcccacca tgtgaaaggt tcataccaag aacagtatcg cctggttcaa
    10981 gcactgtatg ataaactgcc atattcgctt gagcacctga gtgtggttgg acattcgcat
    11041 attcagcgcc aaataatttt ttcgcgcggt cgcgtgctaa atcttccaca atatccacga
    11101 attcacatcc gccgtaatag cgtttccctg ggtaaccttc tgcatattta ttcgttaata
    11161 cagatcccat agcttccatt acttgctcac taacaaaatt ctcagatgcg attaattcga
    11221 tattcgcgcg ttgtctacca agctctaact taattgcatc aaaaacttcc ttatcttgct
    11281 tttgtaaata gaccatctgt ggaccccatc cttttctgat aaatttttca agtgaactgt
    11341 tatgtattat ctttaataat tacttaaatc gggtagaaaa gcaagcattt tggaataaaa
    11401 aaacgcaatt tccgatagtg aagcgcttca cttataaaaa acgttcggaa attgcacttt
    11461 ttagttcgta ataggtgatt tcgtattgct cgattgatcc accgtaagga tctggaatat
    11521 ctgttttatc ttcggaaatt agttgaattt tatcgctcgc ttttggaaaa aggcttttta
    11581 gttccgcttg atgattttga gtcattacgt agatttggtc tgcccaatct atatctgctt
    11641 ttttaacttt tttagcttgg tgcgttgttg gcaaattcat ctgcgcgaga atttgacgtg
    11701 agttttcaga gatggcatcc ccgtccagag cacgtgtccc agccgaacga acatctaaat
    11761 ccggacgcaa gttctgcaag attttttcag ctaaagggct tcggcacgta tttcctgtac
    11821 aaacaaataa taccttcatt cgcgaatcct cctgttgcca gcagcttttt ctaatcggtt
    11881 cataatcgct gctccaagtt ccgtttctgg atacacttcc gcaaaaatca catctacatc
    11941 agcatggtcg aaagcccgta aacctttgta aagacttgta gcaatttcgt ccaatgcatt
    12001 tatactgcca gttatttcga tggtaccgct cgtgtttagt tgatttatca gttcttttgt
    12061 cgccaaaata ccgagttttt tattcgcagc ttccgcttta tttatttcac tttgccaaaa
    12121 ttggatagat ccttctatta gataaactgg cgctttcggg gcatagtgcg tgtatttcat
    12181 gccaggtgct tttggttttt ccgtttcttt cgtgttgttt gtcgctatat caacagggcc
    12241 aattatttgt tcaatctgtt cttttgtaac accgcctggg cgcagaataa ctgggatatc
    12301 taaagaacaa tcaataacgg tggattctaa acctacacca gttgcgccgc catcgataat
    12361 tccggctatt tttccatcta aatcttctat tacatgactc gccgtcgtcg gacttggttt
    12421 tcctgaacga ttcgcgcttg gagccgcaac aggaatattc gctgcatcta tcaatgctag
    12481 actaacaggg tgttccggca tacggacgcc tactgtggat aaacccgcag aaacattagt
    12541 tgccaaacta tcttttttca atggaagaat aaccgttagc ggacccggcc aaaatttttc
    12601 catgagctgg atggctttta ctggataact tgcaacaaat ggatccattt gttcacgacg
    12661 ggcgatgtgg acaattaatg ggttatctga cggacggcct ttcgcttcat atattttttg
    12721 aacagcagct tggttagttg cgtctgcacc aagaccgtac actgtttcag ttggaaaagc
    12781 cacgcattca ccgcttcgga gtaatttggc tgcttcctga aagattactt ggtttgattg
    12841 ttggttattt atgttccaat gaatggtttg catgaattcc ggtccccttt acataacttc
    12901 tattatattt taacgttttc cgccttattt ttacagtatt gttttttaaa acctgtaaat
    12961 cgctattttt gaacaaaagt tatccccaaa ctgtggataa taactttgtc aatggggata
    13021 acttcttgtg aaatgtggat aattcgtaaa gctaagtaaa aaagccattt tctttattaa
    13081 gatttgatta aaaaaatttt ttgcacaaca ttttatccac agttttgtgg ataactttcc
    13141 aaagaaaaag acgcttcttt tatagaaacg cctttatacc aatatattag aacatgttac
    13201 gtagcgatct tttgaattga tatctttgtg gataataact gtagaatgtg gataactttt
    13261 ttcgaataat tgttttacac gctcgccttg tgtataacct atctccaccc ctacccaaaa
    13321 agaggaattt aggacatatt gtaagttatc cacaaatcgt tcataaatag caagtccatc
    13381 attttcagca aataatgcta atgaaggttc gttttttagc acataatccg acatttctgc
    13441 tttttctgct tcagaaatat agggcggatt ggcgacaatc atatcgaatc gttcttcgtt
    13501 ttgtttaaat gcttcaagta aatctgtttc gacaaaacgc acatccgcat ttaataacaa
    13561 tgcattcttt ttcgccacgg caagtgctgg agcagaaata tcagaagccg tcatcgaaat
    13621 atcaggaaat gcttttttga gcgcaatcgc gataatcccg cttccggtgc atacatctag
    13681 tacgttttta actggatgtt ttttcaaaaa atcctccgca caagcgacta actcttctgt
    13741 ttcgggacgc ggaataagga catcttctgt cactaaaaaa tcatagccat aaaaaggtgc
    13801 tgtttttaaa atatactgca ccggctcacc agctaagtat ctagcaaaat cttcctcgaa
    13861 ttgcttttca tgatttggtt caagttcacg acttatttcc atccaaagct cagaacgcga
    13921 aagtcccatt ctggtttcta gtaaaatttc tgctgcattt tggtctagcc ctttttcaag
    13981 aaggatggct tcagcatttt ttagcaactg actaatttgc gtcatttaaa tgctccaatt
    14041 tacttgtttg atcttctagg ataagcgcat caatgatttc atcgagttta ccttccataa
    14101 tttgatctag cttttgaatg gttaagccga tgcgatggtc ggttacgcgg ttttgcggat
    14161 agttgtaagt ccggatacgt tcggagcggt cacccgtacc tacagctgat ttacggttgg
    14221 catcatattc ttcgcgagct tcacgttcaa atttatcata tacacgtgcg cgtaatactt
    14281 tcatcgcttt gtctttattt tttagctggg aacgttcatc ttgcatcgat acgacaatcc
    14341 cggttggaat atgcgttaga cgtacagctg acatcgtcgt attgacactt tgtccaccgg
    14401 caccagtaga cgcaaatgta tcagtgcgga tatctttatc gtgcagttca atttctactt
    14461 cttccgcttc tggcaaaatg gctactgtcg ctgttgatgt atggattcga ccgcctgatt
    14521 ctgtttctgg tactcgttga acacggtgcg ccccgttctc atatttcatt cgggaaaagg
    14581 catcatttcc gttcatcatc gcaataattt ctttgtaacc gccaataccg gtcgggttcg
    14641 cgtccatgat ttctactttc cagccgcgtg attccgcata tttgctgtac atacggaata
    14701 aatcgccggc aaataaagct gcttcatctc ctccagctgc tccacggatt tctaaaataa
    14761 cgtttttgtc atcattagga tcttttggaa cgagtaatag ttttagtcgt tcttctaagt
    14821 ctgccttttc tttttgaagt tccgcgaatt cttctttggc catttcgcgc atttcatcgt
    14881 ctagtttttc tcctaggagt tcctttgttt cgttaatttg ttcgttcaca tttttgtatt
    14941 cgcggtacgt ttcgactgtc gccgtaatgc cggattgttc tttggaaagg tcgcgtagtc
    15001 gttttggatc cgatactaca tctggatcac ttaataactc atttagttca tcataacggt
    15061 cttccaccgc ctgtaatcga tcatacattg tatttcaaca cctcttttaa ttattttatt
    15121 ggtggattgg catgacattt gcgacacaca gggtaatagt ggtcatttcc gccaatcata
    15181 atttgttcac ctgtataaac tggttttcct ttgtcatcca cgcgcagaac catcgttgcc
    15241 tttttagcac aaaaccagca aattgttttc atttcttcta gtttatctgc atataatagc
    15301 aagtatttcg agccttcgaa taattcattt cgaaaatcat tttttaaacc ataagcaata
    15361 actgggatat ttaattcatc cacaattttc gctaactgaa atacgtgttc tttttctaga
    15421 aattgcgatt catctaaaag aacgcaattt ggttttggtt taatattcgc tacgatttca
    15481 aaaatatttg tgtcactaaa aataggagtt gcttctcgtt tcagtccaat tcgacttgaa
    15541 atgaagccaa cttggtctct atcgtcaata cctgaagtaa agatagccac tgttttattt
    15601 tgttcttcat aattatgtgc gacttttaga atttcaatgg ttttcccact attcatggaa
    15661 ccataacgga aaaataattg tgccattaag accgctccct ttaactttat aaactctttt
    15721 cctattttat catagagcgg cacaaattgg gacatatagt taaaaaaagc tacgccgcat
    15781 aggggcatag cttgatttta acgaaaaact tctgcgccgc tcccttcgac atcaagaaga
    15841 agaacgtctg catcgatttc cagtgtttgt aaagatgttt gcagtgtgtt agcgaggttt
    15901 cttggagcga atactaagac agttgggccc gcaccgctca aacaagcagc ataggctcct
    15961 tggctttttg caacatcgcg aatttgtgtt aagtgtggca ctaattgact gcgatatttt
    16021 tcatgccata aatcacgttc catcatttca ccagctagcg ccatatcatt gcgtaaaatt
    16081 gctgcaatca ttacattggc gatactgctc gcttggacag cttctttgaa tggaagcgta
    16141 tcaggcaaaa caccgcgact ttccgaagta agaagttctg cctttggaat aaaagcaatt
    16201 aaagcacaat ccggaaaaag gtggcgtaca tagaaatctt ctccatctaa tttcgctcct
    16261 acgacccagt ttccaagaac agcaggcgca acattatcgg gatgcccttc tatttcagca
    16321 gctatccgaa ctttttcctc ttttgaaagg ttaagttcag caagtgtatt ggctaattca
    16381 atccccgcaa caaccgctgc agaactacta ccgagtccac gagctggcgg tatatcacag
    16441 gtcatcacta aatgatgcgg cgttaaatta ggcgccaggt ttaaggccgt ttcgataatt
    16501 acattggttt catcatgcgg aatcccgccg ccaatattat gttcgatata ccaagagtct
    16561 gcttccgctc caatatcaag cgttaaatat aacgttaacg ctaaaccaca cgaatcaaag
    16621 ccagggccaa gattggccgt tgttgccggt acacgaatac gcattaagct ttcactcctg
    16681 aacgtaaatg tgtgcgcatt gcttcgatat catccacatg agaaattgga atttcatgca
    16741 cactcatcgc agtatccgga tctttcaagc cgtttccagt aaagacacaa actactgttt
    16801 cgcctttttt aattgttcca tttgctacat gttggatgac accagctaat gaagcggctg
    16861 aacctggctc gataaagaca ccatcttgtg ctgcaatttt tttatacgca tttacaattt
    16921 catcatctgt tacagaatgg atatatccgc cagattcatc gcgagctgct tctgcaagct
    16981 cccaactagc tggatttccg atacgaatcg ccgttgcaat tgtttccgga ttatcaatcg
    17041 gtttaccttg aacaatcgca gccgcacctt ccgcttcaaa accatgcatc cgtggaagtc
    17101 cagaagcctt ggcctcattc cactctttaa accctttcca gtaggcagaa atgtttccgg
    17161 cattacctac tgggattgca aggacatctg gagcagaacc taattgctca caaatttcga
    17221 atgcagctgt tttttgacct tctaaacgat aaggatttac cgagtttaca agagttactg
    17281 cttctgtttc agccagttca cgaaccgatt ttaacgcttc gtcaaaatta ccttgaattg
    17341 agataatatc tgcgccgtac ataactgctt gcgctaattt tcctagagcg actttgcctt
    17401 ctggaataac aatgtacgct tttaatcccg cacgtgttgc gtatgccgca gccgcagcag
    17461 aagtattccc agtggatgca caaataaccg cttcggcacc ttcttctttc gctttagcaa
    17521 cagccataac cattccacgg tctttaaaag aaccggttgg atttaagcct tcatattttc
    17581 cgtataaagt aacacccagt tctttggaca aattcggtaa tggaataagt ggtgtatttc
    17641 cttccgcaag tgagatcatt ggtgttttat cagttactgg tagatattct ttatattttt
    17701 ctagtaaacc tttatacata tttaaccctc cacaacggaa tattttgcga gcatttgcat
    17761 ttctggctca tctttgaccc tagcgattgc ttgttctaat tgtgcttgac tagttgaatg
    17821 tgtcacgata acaacggtcg ccgtaaaatc atcatacggt tgttgcaaaa ttttatcaaa
    17881 accaacaccg gcttctgcaa aaatttgcgt caacttaagg aaggttcctg ttttatcgtc
    17941 cattgttaga cgaagatagt atttcgagaa aacttgttct ttcggtgtat gcttcgtttc
    18001 gtgtttgtag ctgttaaaag cattcccatt agtaccaaga cggctatttt tagcaacggt
    18061 aattaaatca ctaaccacac tggtcgcagt tggtaattcg ccagcaccag gtccgtaaaa
    18121 cattgtttct ccgactgctg caccagttac aaatacggca ttattttcat agttaacacc
    18181 tgcaagcgga tgagcctttg gtaataaaac cggccccacg ttgacattaa ctgtgccgtt
    18241 tgtttcttcc gccgtaccta ctagtttaat tttataacct aattggtaag ctacatcgat
    18301 atcttcaggc gaaatcccgc gaataccatt tgtttctaca ttatctaaat tcacattcat
    18361 accaaatgcg agtcttgtca taataaccat ttttcttgcg gcatcgattc cgtctacatc
    18421 atttgttgga tcagattcgg caaaacccag cgcttgtgct tctgctaaaa catcttcata
    18481 tgactttttc tctgtcgtca tttttgttag catgaaattg gttgtcccgt tgacgattcc
    18541 cattactttt tgaattttat ctgctgcaag gctgtttacg atcgtacgta aaattggaat
    18601 tccacctgca acacttgctt cataaaacaa atcacagtta ttagcttgtg caactgccac
    18661 taattcgtcg ccgtgtagcg caatcaaatc cttattcgca gttactacat gctttccagc
    18721 tttcaaggcc tgcaaaatgt attcccgcgc agttgtgatg ctgcccataa cctcgacaac
    18781 aacagcaatt tctggatcat ccagtacatc agacggattg gtggttagtt caaaaccttt
    18841 tgtttcataa cggcgatttt tttctaagtc acgaactagc actttcttaa cagaaatatg
    18901 gtatccagtt acttgactaa ttttttcttg atgctcttct aaaatatgaa taacaccgct
    18961 acctaccgtt ccaaatccta acacacctac ttgtaacttt gcttccactt gaaaacctcc
    19021 ttattattgt tt
//
LOCUS       DASDYO010000052        18618 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.052, whole genome shotgun sequence.
ACCESSION   DASDYO010000052 DASDYO010000000
VERSION     DASDYO010000052.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 18618)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18618)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18618
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.052"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            72..1475
                     /locus_tag="U0290_001486"
     CDS             72..1475
                     /locus_tag="U0290_001486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-fucose/L-arabinose isomerase family protein"
                     /protein_id="HEM2301530.1"
                     /translation="MEAVKIGFAPTRRSIFSAPDAVKYANLTRDKLNELNIEFVDIAE
                     FNEDGLLYDDADMMKIAAKFKKAGIQGLFLPHTNFGTEYVCARLAKELDVPVLLWGPR
                     DERPDENGVRLRDTQCGLFATGKILRRFQVPFTYMTNCRLSDPEFERGIRDFIAVCNT
                     VKTFQNMRILQIGPRPFDFWTTMCNEGELLEKFNIQLAPIPLPELIKEIRSVSSEQIE
                     EVDGTVEYCHGCAIVKIKEVDLRMVAALKVAMKNLATKYGCSAIAIQCWTALQDEIGI
                     MPCAANAMLIDEGIPVVCETDIHGAISCLLIEAANLGRNKSFFADWTVRHPDNENGEL
                     LQHCGLFPFSVAKDKPAIGYPLAFDSPGAVEAEAKGGELTLCRFDGDNGEYSLLLGKA
                     RGIEGPYTKGTYLWIEVDNLKRLEEKIVSGPYIHHVSGIHADVVPILYEACKYIGIKP
                     DLYDPIEEDIKAYLRGE"
     gene            1490..2314
                     /locus_tag="U0290_001487"
     CDS             1490..2314
                     /locus_tag="U0290_001487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM2301531.1"
                     /translation="MSELKLKSFEIRKDVLKMIYDAKTGHTGSDLSCADILVALYYGV
                     LNVNPENPEALDRDRYVQSKGHAVEVLWAVLADKGFFAKEELADFSAFGSRLIGHPNN
                     KVAGIEMNTGSLGHGLSVSVGMALAAKMDGKSYHTYTLMGDGELAEGSVWEGAMAAAN
                     YKLDNLTAIIDRNSLQISGRTEDVMSVEPLADKWRAFGWDVIEVDGNDPDKLQAIFKT
                     VNVTGKPRLIIAKTIKGYGVKIAENAAKWHHYVPSSEEYEIAMKDLEERMEACRHE"
     gene            2307..3254
                     /locus_tag="U0290_001488"
     CDS             2307..3254
                     /locus_tag="U0290_001488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464558.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase family protein"
                     /protein_id="HEM2301532.1"
                     /translation="MNKIANRQVMCEVLMKEATRNDSNLVVLTSDSRGSASLGAFAEK
                     FPERLVETGIAEQNIVGIAAGLAHSGKRAFVASPACFLSMRSIEQVKVDVAYSDTNVK
                     LIGISGGVSYGALGMSHHSLQDIAVTRAIPNLEVILPADRLETEAVFDYLLQSNRPAY
                     VRLGRNAVEDCYAEKPVFQIGKAGTLRKGNDVSILATGEMVRVALDAREELKLKGISA
                     RVLNFSTIKPFDQGAVEAALAETKLLISIEEHSIYGGLGAAVSEVVSSSPTSIRHLIL
                     GIPDEPAIAGTSQEIFDYYGLSATGIVATVMKNLGDERR"
     gene            3251..4714
                     /locus_tag="U0290_001489"
     CDS             3251..4714
                     /locus_tag="U0290_001489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase"
                     /protein_id="HEM2301533.1"
                     /translation="MKKHYQIAIDQSTSGTKVLLFKVGELVDRLDKKHRQLYPKKGWV
                     EHNPIEICQNVRTLIADILAKHDLIPADIERLALTNQRETIVAWDKQTGKPLYNAIVW
                     QCNRTKELCETLKKAGYEKRIKQLTGLKIDSYFSASKMKWLLENSSAVRDAASRNQLA
                     FGTMDAWLLFSLTDDSNYFTDRTNASRTLLYDIEKNDWSDELLELFGVKRAYLPEVKQ
                     SAGSFGSYQEIPIHSVMADSEAALYGQGCDAFGAVKATLGTGCSVMMQIGENRLPEND
                     AILTTLAWDVAGVNQFALEGIIRSCGDTLVFLSEQLELFNDYDTACKRAFQLPCNEGV
                     VLIPGQLGLGSPYWNTDIRAEILGLTREHTKWHIIRAGFTSIAFQIKAVIDQMELMTG
                     QNIKRLQVDGGLTKQHELMQYLADVLKAEVAVSPAEELSAIGAIEIADNKLQNKRTIA
                     KLYQPNITHTHALEDFQEWEKQVKSSILKLQKVRNFK"
     gene            4711..6567
                     /locus_tag="U0290_001490"
     CDS             4711..6567
                     /locus_tag="U0290_001490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS beta-glucoside transporter subunit IIBCA"
                     /protein_id="HEM2301534.1"
                     /translation="MNNSDLAKEVVKLVGGKENILSVIHCVTRLRFKLRDENLAETEK
                     IKALKGVMTVVKSGGQYQVVIGDHVSYVYDEVIRVLGIKPDDAPQDNPEQEHKSIFNK
                     FVELISGIFMPVLGLLAASGILKGFLTAAVTMGLINTSAGVYEVLYAASDALFYFMPI
                     ILGFSAGKVFKTNQYLSAAVGAALVYPTLVDMYSSGAHLTFLHIPVILMNYTMSVIPV
                     ILAIYFMSKLEKVLVKFIPKSLQLIFVPLLLLLIVVPVSLIIIGPVSTYASQLLAKGA
                     LGLYSLSPMIAGFFLAGIWQVAVMFGLHWAFIPIFINNISVLGYDPINAMLYCTVFAQ
                     TGAVLAVMLKTRNQELRSLSITATISGFLGITEPAIYGVNLPYKKPFIMACVGSAFGG
                     AIAGMSAAKMFGGFASGGIFGIPMFINPDGIGWDFWGFLISLVVAFSVALILTYFFGF
                     KDKVEEVVIQTGEKATLDETIYSPLQGEIIALNDVKDEVFSAGIMGAGVAILPASGEI
                     RAPFDGTVLSVFQTKHAIGLISKQGVELLIHVGLDTVNLNGQFFDIEVSESEEIKKGD
                     LLGRFELDAIKKAGYDITTPIIVTNSATLADVITVNLGKSVDNNQKILEAKA"
     gene            6587..7852
                     /locus_tag="U0290_001491"
     CDS             6587..7852
                     /locus_tag="U0290_001491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4038 domain-containing protein"
                     /protein_id="HEM2301535.1"
                     /translation="MLKQSADKRRIEKNDKPFFYLADTVWSAFTNIDLTDWAYYLKVR
                     KEQGFNVLQINILPQWDRSILKKMQEPFGISEGFFDLKAKNEAYFKHAEKMLEMAVNQ
                     GFTPALVLLWCNYIPETWGAKFGTSPLFRKEDIKPYTEMMLEHFEQFEPIYIISGDTD
                     FPTETVAAYYLEALETVSKKAPHALKVLHICGRLKDIPENLQTHPALDLYFYQSGHNS
                     EHQSMAYTLAEHFSQLEPIKPVINSEPCYELMGYSRQKYGRFSREDVRKAAWQSVLSG
                     AIAGISYGAHGIWSWHEEGSTFGSALGEGFVSPFNWRQALHFEGATDYAFLKSFILAN
                     DLTTLAPINLVLNQTPEIRAAETEKVVIIYVPSNVPIYLKGQFASLDDYAIDLEQGKK
                     VSLTKILHEEKTEIQMTPFLKDSLYVIHK"
     gene            complement(7913..8716)
                     /locus_tag="U0290_001492"
     CDS             complement(7913..8716)
                     /locus_tag="U0290_001492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464562.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF817 domain-containing protein"
                     /protein_id="HEM2301536.1"
                     /translation="MQFFRLLWVFTWKQALCCIFPGIIFISLALTKLIDIPFIARYDL
                     LLIICLGTQVLLIKFGLETWDELKVIMVFHLIGLGLEIYKVHMGSWSYPEPGLMKLFG
                     VPLYSGFMYSSVASYICQAWKRFDLKMTNWPNIWLVSSLCITIYANFFTHHFIMDFRW
                     ILIVLVLVLFRKTYVYFKVSSTQLKMPLSFSFLCIAFFIYLAENIASFYGAWSYPDQL
                     IAWRPVHVSKITSWYLLVIISIIIVAQLKFVKQKLEQTSVKAKSEATLK"
     gene            complement(8784..9365)
                     /locus_tag="U0290_001493"
     CDS             complement(8784..9365)
                     /locus_tag="U0290_001493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor guanylyltransferase"
                     /protein_id="HEM2301537.1"
                     /translation="MKNEKVNVGIVLAGGRSSRFGEPKAFFQDEATGKTWVELTVSKL
                     LPLCDMVFVSANHENHSKLVALFDAEPSIEIIPDQTAFSEFGPLGGIYAVMVEANAYQ
                     KANFLVLPVDMPFLTPKEIGRLADYPNHFAKTAQANHYLVANIPYSREVLHHLLQDEQ
                     HRVRALLEKLHTKPLAFEEDAPFRNINHQNELF"
     gene            complement(9346..10008)
                     /locus_tag="U0290_001494"
     CDS             complement(9346..10008)
                     /locus_tag="U0290_001494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464564.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2301538.1"
                     /translation="MLRLQFHKKLPFHDLNIDYTFEKPVTAMMGASGSGKSTLFQCVS
                     GLKSIDGGIIEFDGTPWDDSNISLHLPVTERKVGYLFQNLALFPNMNVYENIAFGLKV
                     KKKKKKEQAEIQQQVRKMSDYLQISHLLYSSVQKLSGGEKQRVAMTRAMITEPKLLLL
                     DEPFNGLDEETRLICMKLVGQMAKDFHIPVIFVTHYASEAEMMTEEILVMREGRLEKR
                     KS"
     gene            complement(10011..10682)
                     /locus_tag="U0290_001495"
     CDS             complement(10011..10682)
                     /locus_tag="U0290_001495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464565.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum ABC transporter permease"
                     /protein_id="HEM2301539.1"
                     /translation="MFTSVWHTLLVATISTFLAFMTMLPLSYYFAGRKSRFQLPVEIL
                     ILLPLVLPPTVVGLVLLNVLGRNDFIGGVLWDTFDFSFIFSLSGAIVATTIIILPIMY
                     QGLKSAFLSIDHELVWAAETLSANKKQIFTKIILPNCWQPILAGVLLSFCRAMGEFGA
                     SLMVAGYIEGKTDTIASSIYFMVQQGDMRTAIYLGLINVIIGVFALLVIHVLTIRQSN
                     LTRGM"
     gene            10787..11557
                     /gene="modA"
                     /locus_tag="U0290_001496"
     CDS             10787..11557
                     /gene="modA"
                     /locus_tag="U0290_001496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464566.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2301540.1"
                     /translation="MKKIALIICCGLLLLLGACEDTPEKAKTTTIHISAAASLKDTID
                     DVKPLFEKANPTIKLSFDFGGSGQIRERVESGAPIDGVLLASKKDADTLIKQNLAEKT
                     KEFAGNELVLIEPKNVDQKAGMNLEQLLNDASKIAIGDPESVPAGAYAKQTLENLNLY
                     NAEKAKLVLATDVRQVLSYVEAGNADAGFVYQTDALLSKKVQVKAKIDEKLHDPIAYY
                     SAQVSDSDKKEETATFLDFMNTSEAQKILEKYGFKAAN"
     gene            11652..12875
                     /locus_tag="U0290_001497"
     CDS             11652..12875
                     /locus_tag="U0290_001497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464567.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin molybdotransferase MoeA"
                     /protein_id="HEM2301541.1"
                     /translation="MIEKRNTIRMEQAREILCNQITHLPVEKKCVTEALNQVLQEPIF
                     APFPAPYFRRSGYDGFAITEEDDENYPITLHVVAEVPCGETYDKPLKPGETVRIMTGA
                     KVPDNASKIIMLEQSREADNENEIVLINTQKSTNITEIGTEFAKGDLLLDRGHILNAG
                     SISLLSSFGIQEVQVIRKPKVAILSTGSELVSAGNPLPDGKIFNSNQPLLENLLKVHH
                     AEICAAEQLPDNYEDTKKRLLELTQIADLIITTGGVSVGDFDYMADIAKKEAELLFNK
                     IQMRPGSPTTGMWLDNTLIIALSGNPGACFTGFYLFVEPVLATLMGKDTTETTKVRAK
                     MASDYTKNNGYDRFLRGTYRLSDEGEYLVELVGSDMSSALGNLHLTTCLFKIPRGKVG
                     KLKGEEVEAWLLSSK"
     gene            12854..13339
                     /gene="mobB"
                     /locus_tag="U0290_001498"
     CDS             12854..13339
                     /gene="mobB"
                     /locus_tag="U0290_001498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464568.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin-guanine dinucleotide biosynthesis
                     protein B"
                     /protein_id="HEM2301542.1"
                     /translation="MATILQIIGFKNSGKTTLLNALIRASRKENYTVSAIKHDAHDFS
                     VDHAGTDSYSFQESGAEAVVIANSRQYAVMEQTGIDLKTAIQKLPESDIVLIEGYKEG
                     PFPKIILIREQAEIELLNNSKAVHKIATHNPALKNEAIFIGEEKALTLFAETLIKEFL
                     K"
     gene            13336..13758
                     /locus_tag="U0290_001499"
     CDS             13336..13758
                     /locus_tag="U0290_001499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaE"
                     /protein_id="HEM2301543.1"
                     /translation="MKYVALQHEKIEIGPLSEKLINKNHGGTNLFVGTIREWTGDIQT
                     EEIRYTSYEEMALKELNKLAAEVETKWGADVVIVHRLGLLQITDVAVVIGVSTPHRAA
                     CYEGSRYIIERLKERVPIWKEEKDVDKTRWGGIDANNS"
     gene            13742..13990
                     /gene="moaD"
                     /locus_tag="U0290_001500"
     CDS             13742..13990
                     /gene="moaD"
                     /locus_tag="U0290_001500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdopterin converting factor subunit 1"
                     /protein_id="HEM2301544.1"
                     /translation="MLTTVKFFAFLADKTHKTEVKLNLQQCQTVGEVREVISSEFPEI
                     AVDLATCMLAVNMEFQQDQDLLPEEITEIAVIPPVSGG"
     gene            14003..14485
                     /gene="moaC"
                     /locus_tag="U0290_001501"
     CDS             14003..14485
                     /gene="moaC"
                     /locus_tag="U0290_001501"
                     /EC_number="4.6.1.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic pyranopterin monophosphate synthase MoaC"
                     /protein_id="HEM2301545.1"
                     /translation="MEKDDLTHFNDEKRAKMVDVTSKSETKRRAIARATIHMNEETLA
                     RIHAGKIAKGDVLAVAQVAGIMAAKKTSELIPMCHPIMTTKADISFEDDGKTALTITS
                     EVVTVGKTGVEMEALTAVTIAALTIYDMCKAMDKGMRIEKTYLVEKTGGKSGTFKAEA
                     "
     gene            14514..15515
                     /gene="moaA"
                     /locus_tag="U0290_001502"
     CDS             14514..15515
                     /gene="moaA"
                     /locus_tag="U0290_001502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP 3',8-cyclase MoaA"
                     /protein_id="HEM2301546.1"
                     /translation="MQLLKDKFGRVHDYIRISVTDRCNLRCVYCMPEEGLTFLPHEKV
                     LSKDEIVSFMELMVKFGIKKVRITGGEPLLRTDIVEIVRGLGAIPEIEDISITTNAMY
                     LAKKAEALKDAGLTRVNISLDSLHEDRFKAITRGGRLQKVLDGIQKAEEVGLFPIKLN
                     VVLIKGQNDDEITDFLRFTKDKDINIRFIEYMPIGHAGTSWKEKYLPLDTIFEACNEA
                     GYEYEPVDSIRGNGPSENFRIKGAKGTFGVIHPVSAHFCDSCNRLRLTADGYIKACLY
                     WDEEMNIRPFIQDPVKLMQLVQKAIDNKPENHEMALKLQDEVQSNKPTWRRMSQIGG"
     gene            complement(15550..16038)
                     /locus_tag="U0290_001503"
     CDS             complement(15550..16038)
                     /locus_tag="U0290_001503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="molybdenum cofactor biosynthesis protein MoaB"
                     /protein_id="HEM2301547.1"
                     /translation="MEQKTFIKVTCSILTISDTRNLDTDTSGQLIQSALETAGHEVIS
                     RIVVPDDVTLIKQKINELAANGSFCLITNGGTGIARRDVTYEALFATIQQEIPGFGEI
                     FRMLSYEEVGSRAMVSRAFAGFSESGLLLFALPGSSNACQLAVQKLIIPELPHLIAER
                     QK"
     gene            complement(16050..17048)
                     /locus_tag="U0290_001504"
     CDS             complement(16050..17048)
                     /locus_tag="U0290_001504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ThiF family adenylyltransferase"
                     /protein_id="HEM2301548.1"
                     /translation="MERYDRQMRVKNIGKVGQKKLLTKTILIVGVGAIGSYAAEICAR
                     MGFGKLILIDRDYVELSNLQRQSLFTEQDALDKQAKAYAASKALQLINSDIEIEYIVD
                     DANATSLTPYAGAIDYILDCTDNFMTRDFLNQFCFSHQIPWIFTSCAGNYANLMPIIP
                     PDSACLHCLLGDIPQTNAASCDIIGVDGALIPIVAGMQVSLLTQMIINPDFKSNTYYQ
                     LDNWQFSFRSLEVKKRPDCSGCATGKMISEVPFSEQTVALCGRDTVQFRLPNKSNYHE
                     IKQMLTEQKIIYNENPALLSFQYEKFQFVIFKNGRVLLHGTENITEAKKTYHLFFN"
     gene            17180..17734
                     /locus_tag="U0290_001505"
     CDS             17180..17734
                     /locus_tag="U0290_001505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase"
                     /protein_id="HEM2301549.1"
                     /translation="MKQRIETEKFYPAYPVFVLTYLNEVGEPQMSTGSSSYTLGDSIV
                     IGVSAESNASKHLHAGQKFAVNFPNTEQLGLIEQGGFSSGKRNDKIKVHQIELTKSDS
                     GGVAYIDVCPIVLECTVIQTVSDMDYHTIFAKIDSRLFEKNLVDSDGHFIHEELDLVL
                     FSGDANERKFRQLDTKIETVGGHS"
     gene            complement(17783..18334)
                     /locus_tag="U0290_001506"
     CDS             complement(17783..18334)
                     /locus_tag="U0290_001506"
                     /EC_number="3.5.1.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide deformylase"
                     /protein_id="HEM2301550.1"
                     /translation="MLTMDDIVREGHPALREVATEVTFPLSDEEKKLGREMLEFLINS
                     QDEELAEKYGLRGGVGIAAPQLAVTKRFLAIHVHDEKDRLYSYVLYNPKIRSHSVQQA
                     CLSGGEGCLSVDREVPGYVVRSERVTIDAFDENGTPLKLRFKGYPAIVIQHEIDHLNG
                     IMFYDHINKENPSYLPPDVDVFG"
BASE COUNT         6184 a         3195 c         3886 g         5353 t
ORIGIN      
        1 taaagaaagc gattactgat tgctttttat gagaactaaa ataattacta aactaaaaag
       61 gtggttagaa ggtggaggcg gttaaaattg ggtttgcgcc gacaaggcga agtatattta
      121 gtgcaccaga tgcagtcaaa tatgcgaatc tcacacgaga taaactaaac gaactaaata
      181 ttgaatttgt ggacattgca gaatttaatg aagatggatt gctttatgat gatgcagata
      241 tgatgaaaat tgcagcaaaa tttaaaaagg ctggaatcca aggtttgttt ttaccacata
      301 ctaattttgg aacggaatat gtttgtgcga gacttgctaa agagttagat gtaccagtat
      361 tgctttgggg tccgcgtgac gaacgacctg atgaaaatgg tgtgagactt cgagatacgc
      421 agtgcggttt gtttgcaact ggaaaaatct tacgtcggtt tcaagtacca tttacttata
      481 tgacaaattg ccgtctatct gatccagagt ttgaacgagg aattcgagat ttcattgcag
      541 tttgtaatac ggtaaaaaca tttcaaaaca tgcggatttt acaaattgga ccacggccat
      601 ttgatttttg gacaacgatg tgtaatgaag gagagttgct agaaaaattc aatattcaat
      661 tagctccaat tccgcttcca gaattaataa aagaaattcg tagcgtatct agcgaacaaa
      721 tagaggaagt ggatggaacc gtcgaatatt gtcacggttg tgcaatcgtt aaaattaaag
      781 aagttgactt acgaatggtt gctgctctta aagttgcgat gaaaaattta gcaacaaaat
      841 atggttgtag tgcgattgcc atccaatgtt ggactgcact tcaagatgaa attggtatta
      901 tgccttgcgc tgcaaacgcg atgctcatag atgaaggaat tccagttgtt tgtgaaacag
      961 atattcatgg agcaatttct tgtttattaa tcgaagcggc aaatttgggc agaaataaaa
     1021 gtttttttgc agattggact gttagacatc cagataatga gaatggtgaa ttgctacaac
     1081 attgtggact gtttccgttt tctgttgcaa aagataaacc ggcaattggc tatccgttag
     1141 catttgattc acctggtgca gtcgaagcgg aagcgaaagg tggcgaatta accttatgtc
     1201 gttttgatgg tgataatggc gaatattcct tgttactggg taaagcgaga ggtattgaag
     1261 gtccgtatac aaaaggaaca tatctttgga ttgaggtaga taatttgaaa cgattagagg
     1321 aaaaaatcgt ttcaggacca tatattcatc atgttagtgg tatccatgca gatgtggtcc
     1381 ctattcttta tgaagcatgc aaatacattg gcataaagcc agacctctat gatccaattg
     1441 aagaagatat aaaagcttat ttacgcggtg aatagagaaa ggagtaaaaa tgagtgaatt
     1501 aaagttaaaa tcgtttgaaa ttagaaaaga tgttctaaaa atgatatatg atgcaaaaac
     1561 gggacatact ggttcagatt tatcatgtgc ggatattctt gtggcgcttt actatggtgt
     1621 gctgaatgtt aatccggaaa atccagaagc tttagatcgt gatcgttacg ttcaaagtaa
     1681 aggacatgct gtcgaagttc tttgggcagt tttagcagat aaagggtttt ttgcaaaaga
     1741 agaattggct gatttctccg catttggctc gcgtttaatc gggcatccaa ataataaagt
     1801 agctggaatt gaaatgaaca caggttcgct cggccatggt ttatctgttt cggtgggtat
     1861 ggcattagct gctaaaatgg atgggaaaag ttatcacacc tatacactca tgggggacgg
     1921 ggaacttgca gaggggtctg tctgggaagg cgcaatggct gcagcaaatt ataaattaga
     1981 taatttgact gcgattattg atcggaattc cttacaaatc tccggtcgaa cagaagatgt
     2041 aatgagtgta gaacctttgg cagataagtg gcgcgcattt ggttgggatg ttatcgaagt
     2101 ggatggaaat gatccggata agctacaagc gatttttaaa acagttaatg tgactggaaa
     2161 acctcgtcta attattgcaa aaacgataaa aggttatggg gttaaaatag ctgaaaatgc
     2221 tgctaaatgg catcattacg taccaagcag tgaggaatac gaaatagcta tgaaagattt
     2281 agaggaaaga atggaggcat gccgtcatga ataaaatagc gaaccgccaa gtaatgtgtg
     2341 aagttttaat gaaagaagca actcgtaacg atagtaattt agttgtttta acaagtgatt
     2401 caagaggatc cgcttcactg ggggcttttg ctgagaaatt tccagagcga ctagttgaaa
     2461 ctgggattgc cgaacaaaat attgttggaa ttgcagcagg cttagcacat agtggcaagc
     2521 gagcttttgt cgcttcacca gcatgttttc taagtatgcg cagtattgaa caggtaaaag
     2581 tagacgtggc ttactcagac acgaatgtaa aattgattgg tatcagcggt ggtgttagtt
     2641 atggtgcact tggtatgagc catcattcgc ttcaagatat tgctgttact agagcgattc
     2701 ctaatttaga agtcattcta ccagctgatc gtctggaaac ggaagctgtt tttgactatt
     2761 tgcttcaatc aaatcggccg gcgtacgttc gtcttggcag aaatgcggta gaagattgtt
     2821 acgcagaaaa accagtattt caaattggga aagctggaac ccttaggaaa ggaaacgatg
     2881 tgtcaatttt agcaactggt gaaatggtac gagtcgcact tgatgcaagg gaagaattga
     2941 agttgaaagg aatcagcgca cgcgtattga atttttcaac aatcaaacca tttgaccagg
     3001 gagcagtaga agcggcatta gctgaaacaa aactacttat tagcatagaa gaacatagta
     3061 tttatggtgg cttaggtgca gcagtgagtg aagtggtaag tagttcgcca acaagtattc
     3121 gtcatttgat cttaggaatt ccagatgaac ctgctatcgc tggaacgagc caagaaatct
     3181 ttgattatta tggcttatct gctactggta ttgttgctac agttatgaaa aaccttggag
     3241 acgaaagaag atgaagaaac actatcaaat cgctattgat caaagcacat ctggaacgaa
     3301 agtattattg tttaaagtag gtgaacttgt agatcgttta gataaaaagc atcgacagtt
     3361 gtatccgaag aaaggctggg tagagcataa tccaatcgaa atttgtcaaa atgtccgtac
     3421 attaattgcg gacatattgg caaaacatga tttaattcca gcggatatcg agcgacttgc
     3481 tttgacgaat caacgggaaa caattgtagc ttgggataaa caaacaggca agccacttta
     3541 taatgcgatt gtatggcaat gtaatcgaac aaaagaactt tgcgaaacat taaaaaaagc
     3601 tggttatgaa aaaagaatta aacagcttac cggattgaaa attgattctt atttttctgc
     3661 ttctaaaatg aagtggttat tggaaaatag ttctgcggtg cgggatgcag caagtcgtaa
     3721 tcaattggca tttggcacaa tggatgcttg gttgttattt tcgcttacgg atgatagtaa
     3781 ttatttcaca gaccgaacaa acgccagccg cacactcctt tatgatattg aaaaaaatga
     3841 ttggtcagat gagttactcg aactttttgg agttaaacgt gcttatttac cagaagtgaa
     3901 gcaatctgct ggaagttttg gaagttatca ggagataccg attcatagtg tgatggctga
     3961 ttcagaagcg gcactttatg gacaaggctg tgatgcattt ggggcagtga aggcgacgct
     4021 tgggacagga tgctctgtta tgatgcaaat tggtgagaac agattacctg aaaacgatgc
     4081 tattttgaca actcttgcct gggatgttgc aggcgtgaac cagtttgcgt tagaaggaat
     4141 tattcgttct tgtggagaca cattggtttt tttatccgaa caattagaac tatttaatga
     4201 ttacgataca gcttgtaagc gagcatttca attaccatgc aatgagggtg ttgtgctaat
     4261 tcctggacaa ttaggtttag gttcgcctta ttggaataca gatatacgag cagagattct
     4321 tggtctcaca cgagaacata caaaatggca tattattcgt gccggtttta caagtattgc
     4381 atttcaaatt aaggctgtta ttgaccaaat ggagttaatg acaggtcaaa atattaagcg
     4441 cttacaagta gacggtggat taacaaagca acatgagttg atgcaatatt tagcagatgt
     4501 tttaaaagca gaagtggcag tcagtcccgc ggaagaactt tcggcaattg gtgctattga
     4561 aattgccgac aataaactac aaaataagag aacgatagca aaattgtacc aaccaaatat
     4621 cactcataca catgctttgg aagattttca agaatgggaa aaacaagtga aaagcagtat
     4681 tctaaaatta cagaaggtga ggaattttaa atgaataatt cggatcttgc aaaagaggtt
     4741 gtaaagcttg ttggtggaaa agaaaacatt ttgagtgtaa ttcactgtgt gacaagacta
     4801 cggtttaagt tacgtgatga aaatctagca gaaacagaaa aaatcaaagc cttaaaaggt
     4861 gttatgacgg ttgtgaaaag tggtggacaa taccaagtgg ttatcggtga tcatgtgagt
     4921 tatgtttatg atgaggtcat tcgagtatta gggattaaac cagatgatgc gccgcaagat
     4981 aaccctgaac aagaacacaa aagtattttt aataagtttg ttgaattaat ttctggaata
     5041 tttatgccag tactgggtct attggcagct tcaggtattt tgaaaggatt cctgacagcg
     5101 gcagttacaa tgggactaat taatacctca gctggtgttt acgaagttct ttacgcagca
     5161 agtgatgccc tcttttactt tatgccaatt atacttgggt tttcagcagg gaaagtattt
     5221 aaaacgaatc aatatctttc tgctgcggtt ggtgcagcac ttgtttaccc gacgcttgtt
     5281 gatatgtata gcagcggagc tcatttaaca tttctacata tccctgtaat tttaatgaat
     5341 tatacaatgt ctgttattcc tgttatttta gctatttact ttatgagcaa actagaaaaa
     5401 gtattagtga aatttattcc gaaaagttta caattgattt ttgtccctct cttattactt
     5461 ttaattgtgg tgcctgtatc tctaattatt atcggacctg tttcaacata tgctagccaa
     5521 ctacttgcaa aaggagcatt gggactttat tcgcttagtc caatgattgc aggattcttc
     5581 ctggctggta tttggcaagt ggctgtcatg ttcggattac actgggcatt tatcccgatt
     5641 ttcattaata atatttctgt tttagggtac gatccaatta atgctatgct ttattgtact
     5701 gtattcgcgc aaactggtgc ggttctggca gtaatgctta aaacccgaaa ccaagaatta
     5761 cgttcccttt ctataacagc aactatttca ggatttttag gaatcacgga accagcgatt
     5821 tatggagtaa acttgccata taaaaaacca tttattatgg cttgcgtagg atcagcattt
     5881 ggtggggcaa ttgcagggat gagtgctgcg aaaatgtttg gaggcttcgc gtctggtggg
     5941 attttcggta ttccgatgtt cattaatcca gatggaatag gatgggattt ttggggattc
     6001 ttaatttctt tagtagtggc attcagtgta gcgttgattt taacttattt ctttggattt
     6061 aaagataaag ttgaggaagt tgtgattcaa acaggagaaa aagctacatt agacgaaact
     6121 atttatagcc cacttcaagg ggaaataatt gcattaaatg atgtgaaaga tgaagttttc
     6181 tctgctggta taatgggagc aggagtagcg attcttccag cgagtggcga aattcgtgct
     6241 ccatttgatg gaacagtact tagtgttttt caaaccaagc atgcgatagg gttgatttcc
     6301 aaacaaggag tcgagttgtt aattcatgtt ggacttgata cagttaatct aaatggtcaa
     6361 ttttttgaca ttgaagtgag cgaatcagaa gaaataaaaa agggcgattt attaggaaga
     6421 tttgaattag atgcaattaa aaaagctggc tatgatatta caacgcctat tattgtaact
     6481 aatagtgcca cactcgccga tgttattaca gtgaaccttg gaaaaagcgt agataataac
     6541 caaaagattt tagaagcaaa ggcttaatat agaaagggtg aaaaaaatgt taaaacaaag
     6601 tgcagacaag cgccggattg agaaaaatga caaacctttt ttctaccttg cagatactgt
     6661 ttggagtgcg tttacaaata ttgatttaac agattgggcc tactatttaa aagtccgaaa
     6721 agagcagggg tttaatgtac tgcaaatcaa tattttgcca caatgggatc gaagtatact
     6781 aaaaaaaatg caagagccgt tcggtataag tgaaggtttt ttcgatttaa aagctaaaaa
     6841 tgaagcttac tttaaacatg cagaaaagat gttagaaatg gcagtgaatc aaggttttac
     6901 tccagcgctt gtgttattgt ggtgtaatta tattccagag acgtgggggg caaaatttgg
     6961 tacttcacca ctgtttcgaa aagaagacat taaaccctat acagaaatga tgttggaaca
     7021 tttcgagcaa ttcgaaccaa tttatatcat tagtggggac acggattttc caacggaaac
     7081 tgtagcagct tattatttgg aagctttaga aaccgtttct aaaaaagcgc cacacgcact
     7141 taaagttttg catatttgcg gtcgtttgaa agatattccg gaaaatctgc aaacacatcc
     7201 agcacttgat ttgtattttt atcaatctgg acataattcg gagcaccaat caatggcgta
     7261 tacgttggca gaacacttta gtcagttaga gccaatcaag ccagttatta attcagaacc
     7321 gtgttacgaa ttaatgggat atagtcgaca aaaatatggt cgttttagcc gagaagatgt
     7381 acgaaaagca gcttggcaaa gtgtcttatc tggtgctata gctggtattt cttatggggc
     7441 acatggtatt tggagttggc atgaagaagg aagtacattt ggatcagctc taggcgaagg
     7501 ttttgtttct ccatttaatt ggcgacaagc acttcatttt gaaggagcta cagattatgc
     7561 atttctaaaa tcctttattt tggcaaatga cttaacaaca ctggcaccaa taaatttagt
     7621 tttaaatcaa actccagaaa ttcgagcagc ggagaccgaa aaagtagtta tcatttatgt
     7681 gccatcaaat gtcccaattt atttgaaagg gcaatttgct tctttggatg actacgcgat
     7741 tgatttggag caaggtaaaa aggtcagcct tacaaaaata cttcatgaag aaaaaacaga
     7801 aattcagatg actccttttt taaaagatag tttatatgta attcacaaat aaattccaat
     7861 ttctttctgg aaaaaataat tttgtttacc aataaaaact aaagcgaggc cactatttca
     7921 gcgtggcctc gcttttggct tttacagaag tttgttctaa tttttgctta acaaatttaa
     7981 gttgtgcgac gattataata ctaataataa caagtaaata ccaactcgta atttttgaaa
     8041 cgtgcaccgg acgccatgca atcagctggt ctggataaga ccaagctccg taaaaactag
     8101 caatgttctc cgcaagataa atgaaaaagg cgatgcataa aaaggaaaaa gataaaggca
     8161 ttttgagttg agtcgaacta actttgaaat aaacatatgt ttttcggaat aaaacgagaa
     8221 ctaaaacaat caaaatccac cgaaaatcca ttataaaatg atgcgtgaaa aaattagcgt
     8281 aaattgttat gcaaaggcta cttactaacc agatatttgg ccaatttgtc attttaagat
     8341 caaatctttt ccaagcctga caaatataac tcgccacact tgaatacata aaaccgctat
     8401 aaagcggcac accgaaaagt ttcattaaac caggctctgg ataactccat gaccccatat
     8461 gtactttata gatttcaagt ccaagtccaa taagatgaaa aaccataatt accttaagtt
     8521 catcccatgt ttctaaaccg aattttataa gtagcacttg cgttccaaga caaataatca
     8581 aaagtaagtc gtagcgcgca ataaaaggaa tatcaatcaa ttttgtaagt gcaagcgaaa
     8641 taaagataat gcctggaaaa atacaacaaa gtgcttgctt ccaagtaaac acccaaagta
     8701 agcggaaaaa ttgcataaaa aaacctcttc tcatgatttt ctctagttta ccaaaaaaaa
     8761 ctaaagaaaa ggacaagaaa aggttaaaaa agttcatttt gatgattgat atttctaaat
     8821 ggggcatctt cttcaaatgc taaaggtttg gtatggagtt tttcgagtaa agctctgaca
     8881 cgatgttgct cgtcttgtag taagtgatgt agcacttctc gtgagtaggg aatattggca
     8941 accaaatagt gatttgcttg cgctgtttta gcaaaatgat taggataatc agccagtcgt
     9001 ccaatttctt ttggagtcaa aaaaggcata tcgacaggaa gtactaggaa attagctttc
     9061 tgataagcat ttgcttctac catcaccgca taaattcctc caagcggtcc aaattcactg
     9121 aatgcggttt gatctggaat gatttcaatg cttggttctg catcaaaaag agccacgagt
     9181 tttgaatgat tttcatgatt tgccgataca aataccatat cgcaaagcgg cagcaactta
     9241 ctaaccgtta gctcgaccca cgtttttcca gttgcctcat cctgaaaaaa cgcttttggt
     9301 tccccaaaac ggcttgagcg accaccggct aatacaatgc cgacattaac tttttcgttt
     9361 ttcaaggcgt ccctctcgca taactaaaat ttcttcggtc atcatttctg cttccgaggc
     9421 ataatgcgtg acaaaaataa cggggatatg gaagtctttg gccatttgac caactaattt
     9481 catacaaatc aaacgcgttt cttcatctaa accattgaaa ggttcatcca gtaaaagtaa
     9541 ttttggctcc gtaatcattg ctcgagtcat cgcaacacgt tgtttctcgc caccagataa
     9601 tttctgaacg gaagaataaa gcaggtgaga aatttgtaga taatcactca tttttcgtac
     9661 ttgttgctga atttctgctt gttctttttt cttctttttc ttcactttca agccaaaagc
     9721 gatattttca tacacattca tatttgggaa tagagctaaa ttctgaaata aataacctac
     9781 tttgcgctct gttacaggaa gatgtaacga aatattggaa tcatcccacg gagtcccgtc
     9841 aaattcaata atgccgccgt caatactttt caagccacta acgcactgaa atagagttga
     9901 cttgcctgaa ccacttgcgc ccatcatcgc ggttactggc ttttcaaacg tataatcaat
     9961 atttaaatca tgaaaaggaa gttttttgtg aaattgtaat cgtagcataa ttacatcccc
    10021 ctcgttaaat tactctggcg tatagttaat acatgaatga caagtaaagc aaacacgccg
    10081 ataatgacgt taattaatcc aagataaatc gcagtacgca tgtctccttg ttgcaccata
    10141 aaatagatgc ttgaagcaat ggtatccgtc ttgccttcaa tataaccagc caccatcaaa
    10201 cttgcgccaa attcacccat cgcccgacaa aaactaagca aaacccctgc taaaattggt
    10261 tgccagcaat tcggtaaaat aatttttgtg aaaatttgtt ttttattcgc tgaaagagtc
    10321 tctgctgccc atacaagttc gtgatcaatt gataaaaatg ctgatttcaa accttgatac
    10381 ataatcggta aaataataat tgtcgttgca acaattgcgc cgctaaggga aaaaataaag
    10441 ctgaaatcaa aagtatccca aagcacacca ccaataaaat cattgcggcc gaggacgttc
    10501 agtaaaacta aaccaaccac agttggcggt aaaacaagcg gaagtaaaat taaaatctcc
    10561 actggtaact ggaaacgtga ttttcgaccg gcaaaataat aactcagtgg taacatcgtc
    10621 ataaacgcga gaaacgtaga aattgtagct acaagtaatg tatgccaaac agatgtaaac
    10681 ataaatctcc tcctgaaccc tctagtactt ctattattat cgttctctct ggtataaaat
    10741 gtcaaactta agtacaatgt aactaaataa aaaaggggga tgaagaatga aaaaaatagc
    10801 acttattata tgttgtggat tattactact tctcggagct tgcgaggata cacctgagaa
    10861 agccaaaaca acgactatac atatttcagc tgcagcaagt ttaaaagata cgatagatga
    10921 cgtaaagcca ctttttgaaa aagctaatcc aacgattaaa ttatcctttg attttggtgg
    10981 ttctgggcaa attcgcgaac gtgtcgaaag cggtgcacca attgacggcg tccttttagc
    11041 gagtaaaaaa gatgcggata cactgattaa gcaaaattta gcagaaaaaa cgaaagaatt
    11101 tgcgggaaat gaactcgttc taattgaacc taaaaacgtg gatcagaagg cagggatgaa
    11161 cttagaacaa ttacttaatg atgcatccaa aatcgccatc ggggatccag aatcagtacc
    11221 agcaggcgcc tatgccaaac aaacgctcga aaacttaaat ctatataatg cagaaaaagc
    11281 aaaactcgtt cttgccaccg atgttcgtca agtcttatcc tatgtggaag ctggaaatgc
    11341 agatgcaggc ttcgtttacc agacagatgc tctattaagc aaaaaagtac aagtgaaggc
    11401 aaaaatcgat gagaaactcc atgatccaat tgcttactat agcgcacaag tcagtgactc
    11461 ggataaaaaa gaagaaaccg caacattcct tgattttatg aatacatcag aagcgcaaaa
    11521 aatactggaa aaatacggat tcaaagcagc aaactaagga gaagtcgctt tactttttaa
    11581 aacaagcaaa ctcctgtata ttggtactaa agaaaacgca tacattattt aggaaaggga
    11641 agtgcgccca gatgattgaa aaaagaaata ccattagaat ggaacaagcg agagagatat
    11701 tatgtaatca aataacgcat cttccagtag aaaagaaatg tgtgacagag gcgttaaacc
    11761 aagtactaca agaacctatt ttcgcgccgt ttcctgctcc ctattttagg cgctctggtt
    11821 atgatggctt tgcgattact gaggaggatg acgagaatta tcctatcact ttgcacgttg
    11881 tagcagaagt tccgtgtggg gaaacatacg ataaaccgct aaaacctggt gaaaccgtcc
    11941 gaataatgac tggagcaaaa gtgccagata atgcctcgaa aattattatg ctcgaacaat
    12001 caagagaagc ggataacgag aatgaaatcg tacttataaa tacacaaaaa tctactaaca
    12061 ttacagaaat cggtacggag ttcgccaaag gagatttgct gttagatcgt ggacacattt
    12121 taaatgccgg ttcgataagt ttactgtcat cctttggaat tcaagaagta caagtcatca
    12181 gaaaaccaaa agtagctatt ttatccacag gtagtgaact tgtttctgct ggaaatccac
    12241 ttccagatgg caaaattttt aatagtaatc aaccattact ggagaattta ctaaaagtac
    12301 atcatgccga gatttgcgcg gccgaacaat tacctgataa ttatgaggat acgaaaaagc
    12361 gattactaga attgactcaa atagcagact tgataatcac tacaggtggt gtttctgtag
    12421 gggactttga ctatatggct gatattgcaa aaaaagaggc agaattactt tttaataaaa
    12481 ttcaaatgcg accgggcagt ccgacaacag ggatgtggtt ggacaacacg cttatcatcg
    12541 cactttctgg taatccaggg gcatgcttta caggttttta cttattcgta gaaccggtat
    12601 tagctacctt aatggggaaa gatacaactg agacgaccaa agtccgtgca aaaatggcga
    12661 gcgattacac taaaaataat ggctatgatc gttttttacg aggaacctat cgtttgtctg
    12721 acgaagggga atatttggtt gagttggtag gaagcgatat gtcgagtgcg ctaggaaacc
    12781 tccatttaac cacctgttta ttcaaaatcc ctcgcggtaa agttggaaaa ttaaaaggag
    12841 aagaggtcga agcatggcta ctatcctcca aataatcggc tttaaaaata gcgggaagac
    12901 aactttacta aatgcactaa ttcgagctag tcggaaggaa aactacacag tatctgccat
    12961 caaacatgat gcacatgatt tttctgtaga tcacgcggga acggattcct actcgtttca
    13021 agaaagtggt gcagaggctg ttgttattgc gaattcgaga caatatgctg tgatggaaca
    13081 aaccggcatc gatttaaaaa cagccattca aaagttacca gaatcagata tcgttcttat
    13141 agaaggctac aaagaaggtc cttttcctaa aattatttta attcgcgaac aggcggaaat
    13201 cgaactttta aacaatagta aagctgtcca taaaattgcg acgcataatc cagcgttaaa
    13261 aaatgaagct attttcatcg gcgaagaaaa agctttaacc ctttttgcag aaacgttaat
    13321 caaggagttt ttaaaatgaa atatgtagct ttgcaacatg aaaaaatcga aataggacca
    13381 ctttctgaaa aactaatcaa taaaaatcac ggtgggacta atctttttgt tggtacaatt
    13441 cgagaatgga cgggtgatat tcaaacagaa gaaattcgtt acacatcgta cgaggaaatg
    13501 gcgctcaaag aactaaataa attagcagca gaagtagaaa caaagtgggg ggcggatgtt
    13561 gtcatcgtcc accgactagg acttttacaa ataacagatg tcgctgtggt catcggtgta
    13621 tcaacaccac acagagccgc ttgctacgag ggatccagat atattattga acgtttaaaa
    13681 gaacgggtac ctatatggaa agaagaaaaa gatgtcgata aaacaaggtg gggtggcata
    13741 gatgctaaca acagttaaat ttttcgcttt tttagctgat aagacacata aaacggaagt
    13801 gaaattgaat ttgcagcaat gccagacagt tggcgaggtt cgagaagtta ttagtagtga
    13861 atttcctgaa atagccgttg atttggcaac atgtatgcta gctgtgaata tggaatttca
    13921 acaagatcaa gaccttttac cagaagaaat aaccgaaatc gcagtcattc cgccagtaag
    13981 cggtggataa ggagggtaat agatggaaaa agatgattta acgcatttta acgatgaaaa
    14041 acgcgcaaaa atggtagatg ttacgagcaa atctgaaaca aaacgccgtg caatcgctag
    14101 agctacgata catatgaatg aagaaacctt agcgcgtatt catgctggta aaattgctaa
    14161 aggagatgtt ttggccgttg cgcaagttgc tggaatcatg gcggctaaaa aaacaagcga
    14221 actaattcca atgtgccatc cgattatgac gacaaaagct gatatttctt ttgaagatga
    14281 cggtaagacc gcgctaacta tcacgtccga agtcgtaacc gttggaaaga cgggcgtcga
    14341 aatggaggcg ctcacggcag taaccattgc agcattaacc atttatgaca tgtgcaaagc
    14401 aatggataaa ggcatgcgga ttgaaaaaac gtatttagtg gaaaaaacag gtggaaaaag
    14461 cgggacattt aaagcagaag cgtaactatt ttgtaggata ggagttttgt tttatgcaat
    14521 tattaaagga taaatttggg cgggtacacg attatattcg tatttcagta acagatcggt
    14581 gtaatttaag gtgtgtgtat tgtatgcccg aagaaggcct gacatttttg cctcatgaaa
    14641 aagtactatc caaagatgaa attgtcagct ttatggaatt aatggtgaaa ttcggcatca
    14701 aaaaagtccg catcactggc ggagagccgt tactaagaac tgatatagtg gaaattgttc
    14761 gcgggctggg agcaattcct gaaatagagg atatttcgat tacaacgaat gctatgtatt
    14821 tggcaaaaaa agcagaagca ctgaaggatg cggggctcac acgtgtgaat atcagcttag
    14881 attctcttca tgaagatcgt tttaaagcaa ttacacgagg tggccgtttg caaaaagtac
    14941 ttgatggtat tcaaaaagca gaagaagttg gactgttccc aattaagctt aatgtcgtac
    15001 taattaaagg acaaaacgat gacgaaataa ctgatttcct tcgatttaca aaagataaag
    15061 atattaatat tcgtttcatt gaatacatgc caattggtca tgctggtacg agttggaaag
    15121 aaaaatattt gccgcttgat acaatttttg aagcttgtaa tgaagctggt tatgagtatg
    15181 aaccagtgga ctcgattcgt ggaaatggcc cctccgaaaa tttccgtata aaaggagcga
    15241 aagggacgtt tggtgtgatt cacccggtta gcgctcattt ttgtgatagt tgcaaccgac
    15301 tcagacttac tgcagatggc tatattaaag catgtttata ctgggatgaa gaaatgaata
    15361 tccgcccatt tatccaagat ccagtgaaat taatgcaatt ggtgcaaaaa gcaattgata
    15421 ataagcctga aaatcatgaa atggcattaa aattacaaga tgaagtacaa tctaataaac
    15481 caacttggcg gcgtatgagt caaattggag gataaataaa acatccggtc acatgtgtgg
    15541 tcggatgttt tatttttgtc gttctgctat taaatgaggt aattctggga taatcaattt
    15601 ttgaacagcg agctggcaag cgttacttga tccaggcaac gcaaaaagca gtaagccgct
    15661 ttctgaaaag ccagcgaatg cacgagacac catggcgcga ctaccaactt cttcgtaact
    15721 gagcatcctg aaaatttcac caaacccagg gatttcttgc tgaatcgttg cgaataatgc
    15781 ttcatacgta acatcacgcc tagcaatacc ggtaccacca tttgtgataa ggcaaaagga
    15841 cccattagct gctaactcgt ttattttttg cttaatgagc gtaacatcat caggcacgac
    15901 aatccgcgaa ataacctcat gcccagcagt ttctaaggca gattgaatca gttgaccact
    15961 agtatccgta tccaaattcc ttgtatcact aatcgttaaa atactacaag ttaccttaat
    16021 aaatgttttt tgttccataa ctgcctcctt taattgaaaa ataagtgata tgtttttttc
    16081 gcttctgtta tattttctgt cccatgaagt aacacgcgtc catttttgaa aataacaaat
    16141 tgaaattttt cgtattggaa actgagtaaa gcgggatttt cattataaat aattttttgt
    16201 tccgtcagca tttgtttaat ttcgtgataa ttgcttttat ttggcagacg aaattgtact
    16261 gtatctcttc cgcaaagagc gactgtttgc tcggaaaaag gcacttctga aatcattttt
    16321 ccagttgcgc aaccagagca atcggggcgt ttcttgactt caagagaccg gaaagaaaat
    16381 tgccaattat ctagttgata gtaggtattt gatttgaaat caggattgat tatcatttgt
    16441 gtaagtaaag aaacttgcat gcccgcgaca atcggaatca gcgcaccatc cacaccgata
    16501 atatcgcaac ttgctgcgtt ggtttgggga atatcaccaa gtaaacagtg taaacaagca
    16561 gagtcgggtg gaataattgg catgagattc gcataatttc cagcacacga ggtgaaaatc
    16621 catggaattt gatggctgaa acaaaattga tttaaaaagt cgcgcgtcat aaaattatct
    16681 gtacaatcaa gtatgtaatc aattgctccg gcataaggcg ttaaacttgt tgcgttcgca
    16741 tcatcaacta tatattcgat ttcaatatcg ctattaatta attgtaacgc tttggatgcc
    16801 gcatacgctt ttgcttgttt gtctaatgca tcttgttccg tgaaaagcga ttggcgctgc
    16861 aagttactta gctccacata gtcacgatca attaaaatta actttccaaa gcccattcgt
    16921 gcacaaattt ctgcggcata tgaaccaatc gcgccaacgc caacaatcaa aatcgttttc
    16981 gtgagtaact ttttttgacc aacttttccg atgttcttaa cacgcatctg tctatcataa
    17041 cgttccaatt ttccaccttc tttccaatct tattttacca gaaaaacaca taaagcgctt
    17101 acttgtaagg ttttaattta ttcttgaaat cttagtatgg catcatttat aatgaaagaa
    17161 aaaactagag gtgctaactt tgaaacagcg catagaaaca gaaaaatttt atccagctta
    17221 tccagtcttt gtattaacgt atttgaatga ggttggagaa ccgcaaatgt caacgggatc
    17281 atcatcgtac acattaggag atagtattgt tataggcgtg tcagcagaaa gtaatgccag
    17341 caaacacttg catgctggcc aaaaatttgc agtaaatttt ccaaacacgg agcagttagg
    17401 attgattgag caagggggat tctcgtcagg aaagcgtaac gataaaataa aagttcatca
    17461 aatagaatta accaaaagtg atagtggggg agtagcttac atagatgtgt gtccgattgt
    17521 tctcgaatgc accgtgattc aaacagtttc tgacatggac tatcatacta tctttgctaa
    17581 aattgactcg cgattatttg aaaaaaattt agtggattca gatggtcatt ttattcacga
    17641 agaacttgat ttagtgctat tctcaggcga tgcaaatgaa cgtaaattca gacagcttga
    17701 tacaaaaata gaaacagttg gtggtcactc ataaagtcaa aaatccccgc aggatcttaa
    17761 ttcctgcggg gatttattca atttaaccaa acacatccac atctggtggc aagtatgatg
    17821 gattttcttt attaatatga tcataaaaca taataccgtt caaatgatcg atttcgtgtt
    17881 gaataacaat cgctggataa cctttgaaac gtaatttaag cggtgtacca ttttcgtcaa
    17941 aggcatcaat ggttacacgt tcacttcgga ccacataccc tggaacttct cggtcaacag
    18001 aaagacaacc ttcaccacca gaaagacaag cttgctgaac agaatggcta cgaatttttg
    18061 gattataaag cacataacta taaagacgat ctttttcatc atgtacatga atagctagga
    18121 aacgtttagt cacagcgagt tgtggagctg caattccaac gccaccacgc aacccatatt
    18181 tttctgctaa ctcttcatct tgactgttaa tcaggaattc gagcatctcg cgtcctaatt
    18241 ttttttcttc atctgaaagc gggaaagtca cttctgtcgc aacttctcta agtgctggat
    18301 gaccttctcg tacaatatcg tccattgtaa gcatgatttg attctctcct gttctttaat
    18361 aacttatctt tattttaaca aaagaacgaa aaaaaaggaa tgaaagatta ctagactcga
    18421 aaaaaagagt gttttaatag gtctaaaggc atatttgtta aaaaagagaa agttttaaaa
    18481 gcgaacaata acaattattt tttttataat gttcgtttaa actaaacaaa gaaaaaaatt
    18541 atatgtttgt gaattcacaa actatcgata tttgctgttt gaaagcttga aataggtgtg
    18601 gtaatgcgag agttgcaa
//
LOCUS       DASDYO010000053        18361 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.053, whole genome shotgun sequence.
ACCESSION   DASDYO010000053 DASDYO010000000
VERSION     DASDYO010000053.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 18361)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18361)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18361
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.053"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            195..2756
                     /locus_tag="U0290_001507"
     CDS             195..2756
                     /locus_tag="U0290_001507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465324.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2301551.1"
                     /translation="MKKQRVDYKRRLDQKRAQKAKLIAALITTTTMMVAPVTVNYDSF
                     NHQFALSGIQADAATIDLLGNSNLNTQYSNGKLVITLSGNQLVSASAVSTYYPYFELP
                     SELSSILSNPNIRANTKIDYKIAYLGIGGIGLFNQGTVNGSNSSNFFIDSSRNAVGAK
                     VNHLLGVGVGSISTFTLTIDLLALGVTALPSANDGKLDFAARTGDGLLDVDLLNSNAA
                     RGFITTDVGDADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADADADADADADADAD
                     ADADADADADADADADADADADADADADADADADADADADADADVDIDWRDFLVEKPT
                     VNPIYEGTKTISGTSIYKNMNINTLLKSLQSDAPAGTTFYINLTLPDGTVIGNVLIHA
                     DGTYTINIPNYNLKAGDVIHLQVTAKYGNEVKTSEDVAVTVLPLADSDADADADADAD
                     ADADADADADADADADADADADADADADADGGSNPSTNGGTTGTSNGGTGVTVTNMSS
                     NGSGTMLSSGYSADGTTSISASDLPSTGDTNSSLPWVGLGLFSLAGAFLLRLFRK"
     gene            2830..4488
                     /locus_tag="U0290_001508"
     CDS             2830..4488
                     /locus_tag="U0290_001508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465323.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="poly(glycerol-phosphate)
                     alpha-glucosyltransferase"
                     /protein_id="HEM2301552.1"
                     /translation="MPWRGILDELENKIIDQLTEDEEHATYNGKWHGFLTIGYKNKRA
                     IVINFSYLCLANLINEMKKSAIKNQTEEAISFKIDVAVDYRLENLGEWNKKALKTKKN
                     YYRRGIALNENFKIALMEQEINANAILLPGDEGLAINVENMNRYLIQTNKNQAQLNLT
                     VDSTIVTFNTVGWFFDGKKIHELEPSELEHGRRSTKQLTPDAVFELVGNAGNYLVSQV
                     NQTGEFNYGWFACFDKKIKHYNSLRHASTTYSMLEAYELTGDKTILEAATSTLTYLEQ
                     NFIYEKDELAFLIEPGLREVKLGGSAATLLALTKYMKITGTKTYLPLSRKIANAIISL
                     QEENGKFTHVLEYPSLEVKDIFRIIYYDGEAVFGLLRLYEIDRDSKWLEAAAKSFDHF
                     IRDDYWQNHDHWLSYCANEITKYIPDEAYYEFGMKNAFDNLPFIYGRETTFPTFLELT
                     VATKEMSLRMETEDLQKLLHDYPLAELEKTITKRAIYQLNGYFYPELAIYYKNPARID
                     GSFFIRHQSFRVRIDDVEHNISGYVRYHHLLKQGKLSAEAETVK"
     gene            4591..4863
                     /gene="rpsP"
                     /locus_tag="U0290_001509"
     CDS             4591..4863
                     /gene="rpsP"
                     /locus_tag="U0290_001509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465322.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S16"
                     /protein_id="HEM2301553.1"
                     /translation="MAVKIRLKRIGSKKKPFYRIVVADSRFPRDGRSIETIGTYNPLL
                     DPVEVKIDEEATLKWMHNGAKPSDTVRNLLSREGIMEKFHNQKLGK"
     gene            4880..5110
                     /locus_tag="U0290_001510"
     CDS             4880..5110
                     /locus_tag="U0290_001510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465321.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="KH domain-containing protein"
                     /protein_id="HEM2301554.1"
                     /translation="MEELILSIVKPLVDHPEDVVITPEETDTSLTYKLSVSKEDMGRV
                     IGKQGRIAKAIRTLVYAVGSKNDKKIRLEIIE"
     gene            5221..5955
                     /locus_tag="U0290_001511"
     CDS             5221..5955
                     /locus_tag="U0290_001511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465320.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="gamma-glutamyl-gamma-aminobutyrate hydrolase
                     family protein"
                     /protein_id="HEM2301555.1"
                     /translation="MKPVIGITGNRLVKGVDVFYGHRVTYTQQRYVDAIQKVGGFPIA
                     LPIDDPSVAVQAISLVDGLLLTGGQDITPQFYLEEPSQEIGAYFPPRDSYEIALVRAA
                     LDAGKPIFAICRGMQLVNVALGGSLYQDISQVETKALQHLQRVDEQLGSHTIDIEPTS
                     ELAKHHPNKKLVNSLHHQFIKKLAPSFKVTARTADGMIEAVEGDNLPSWYLGVQWHPE
                     LMFQTDPESEQLFRALVDESKKTMVK"
     gene            5983..6369
                     /locus_tag="U0290_001512"
     CDS             5983..6369
                     /locus_tag="U0290_001512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465319.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlqD family protein"
                     /protein_id="HEM2301556.1"
                     /translation="MEIIQKVVVKQILTEASKQELIEYYTEQKRQIEQECDQLHFEQK
                     KMERKSKFQPERVADYFTHELDLRREKKKLIQFQMEQLEVLELGSEIREREMETIIDV
                     QVGDKWDKSIFDKTIVVKDGIIVEIR"
     gene            6379..6897
                     /gene="rimM"
                     /locus_tag="U0290_001513"
     CDS             6379..6897
                     /gene="rimM"
                     /locus_tag="U0290_001513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465318.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome maturation factor RimM"
                     /protein_id="HEM2301557.1"
                     /translation="MEKMYNVGKIVNTHGLIGEIRVIATTDFPEERFQVGNTVYLFEK
                     NSKKPEKLIIRSHRKHKNFDLLMFEGFTGIHQVERMKEGVLKIKEAQLTDLEENEFYF
                     HEIIGCIVVTTDGEELGEITEILTPGANDVWVVKGSDKKEKLIPYIADVVKEININDK
                     KITIEVMEGLLD"
     gene            6897..7634
                     /gene="trmD"
                     /locus_tag="U0290_001514"
     CDS             6897..7634
                     /gene="trmD"
                     /locus_tag="U0290_001514"
                     /EC_number="2.1.1.228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465317.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (guanosine(37)-N1)-methyltransferase TrmD"
                     /protein_id="HEM2301558.1"
                     /translation="MKIDILSIFPDMFSGVTGNSIIKKAIENERVAVEVTDFREYAEG
                     KHHIVDDYPYGGGAGMLLKAQPIFDAVQAVKEKQPETKPRVILMDPAGKRFDQKMAEE
                     FAEEEHLVFICGHYEGYDERIREHLVTDEVSIGDYILTGGEIGAMIVMDSVIRLLPGV
                     LGNKDSAVTDSFSTGLLEHPHYTRPADFRGMKVPDILLSGNHAWIEEWRDKESLKRTY
                     ERRPDLLKNYPLTDKQKTWLKEWSDSK"
     gene            7654..8043
                     /locus_tag="U0290_001515"
     CDS             7654..8043
                     /locus_tag="U0290_001515"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465316.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301559.1"
                     /translation="MAIFGTPDEKETKKSERQKEREAYVQEENDQKRIGQRWQDIQVS
                     TGPINVNHDILTVVFAKSVRPRIKSDPEAYLETVGFENLLQELQKKALDAGGNGLIHC
                     SFTEQFVDGLVYQLAYGTAVNIKITRF"
     gene            complement(8074..8790)
                     /locus_tag="U0290_001516"
     CDS             complement(8074..8790)
                     /locus_tag="U0290_001516"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2301560.1"
                     /translation="MKITAKHQYWQITTLPYLFPVNCYLILEKDGLTLIDTGILSNAK
                     GIIALIHKLNLPLKRILLTHAHGDHIGGLVAVKAAFPEALVMIGSREKLLVETKEIYA
                     FEAQKPLKGGYSDQLPVSIDHILKDGDMIGSLLIIDTPGHTPGSISFFDERNGHLFVG
                     DLFQTRGGAAICGEKRWLFPFPAMGSWDLPTSIASAENLQLFDVTEIACGHGPVKAMA
                     DFDLTNVLKRAKKQATNEKD"
     gene            complement(8787..9398)
                     /locus_tag="U0290_001517"
     CDS             complement(8787..9398)
                     /locus_tag="U0290_001517"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003739212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)H-dependent oxidoreductase"
                     /protein_id="HEM2301561.1"
                     /translation="MAKIVAIIGDPREKGTSRDLFQKYLAVFQEQPTIEVKIYDIRKL
                     AFDPNLPEGYRTEQTPDIIALKNDVRSADLLLFSYPVWWFNVPAVLKGVIDHLFWPGE
                     SYSFKDKKYFLTGPWRKKRARLIYTIGGMEIQHRLFARPALTALRYPLWMSGVFSVKV
                     TSIDRLDLSIRRTDDYYDKKVTRAAKRDIQFLLKKQIRKKVFA"
     gene            complement(9398..9832)
                     /locus_tag="U0290_001518"
     CDS             complement(9398..9832)
                     /locus_tag="U0290_001518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2301562.1"
                     /translation="MEQWTVKEMAAYVGISADTLRYYEKNKIIVPNRLENGYRVYNTE
                     HLLELKFILVMKYARFSLSEIKLMMEWLRSEPSVACNTASKELLALKAAEIKQTIAHY
                     TKIAALLEELPQIDEVQDYSTVQKDVNTFVEHIFTDIRKDGF"
     gene            10041..10385
                     /gene="rplS"
                     /locus_tag="U0290_001519"
     CDS             10041..10385
                     /gene="rplS"
                     /locus_tag="U0290_001519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L19"
                     /protein_id="HEM2301563.1"
                     /translation="MNKLIDEITKSQLNPDVPNFRPGDTVRVHAKVVEGTRERIQLFE
                     GVVIKRRGAGISETFTVRKISNSVGVERTFPVHTPRIAKLEVIRRGKVRRAKLYYLRN
                     LRGKAARIKEIR"
     gene            11172..12062
                     /gene="inlC"
                     /locus_tag="U0290_001520"
     CDS             11172..12062
                     /gene="inlC"
                     /locus_tag="U0290_001520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 3 internalin InlC"
                     /protein_id="HEM2301564.1"
                     /translation="MKKNNWLQNAVIAMLVLIVGLCINTGSGTKVQAESIQRPTPINQ
                     IFPDPGLANAVKQNLGKQSVTDLVSQKELSGVQNFNGDNSNIKSLAGMQFFTNLKELH
                     LSHNQISDLSPLNDLTKLEELSMNRNRLKNLNGIPSACLSRLFVDNNELRDTDSLIHL
                     KNLEILSIRNNKLKSIVMLGFLSKLEVLDLHGNEITNTGGLTRLKKVNWIDLTGQKCV
                     NEPVRYQPELYITNTVKDPDGRWISPYYISNGGNYVDGCVLWELPVYTNEVSYKFSEY
                     INVGETEAIFDGTVIQPIQN"
     misc_feature    12283..12421
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00558"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L20 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00558"
     gene            12504..13019
                     /gene="infC"
                     /locus_tag="U0290_001521"
     CDS             12504..13019
                     /gene="infC"
                     /locus_tag="U0290_001521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translation initiation factor IF-3"
                     /protein_id="HEM2301565.1"
                     /translation="MSKDMLVNDGIRAREVRLIDQDGEQLGVKSKIDALQIAEKANLD
                     LVLVAPTAKPPVARIMDYGKFRFEQQKKDKEARKNQKVIVMKEVRLSPTIDEHDFDTK
                     LRNARKFLEKGDKVKCSIRFKGRAITHKEIGQKVLDRFAKACEDLCTIEQRPKMDGRS
                     MFLVLAPLHEK"
     gene            13041..13241
                     /gene="rpmI"
                     /locus_tag="U0290_001522"
     CDS             13041..13241
                     /gene="rpmI"
                     /locus_tag="U0290_001522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L35"
                     /protein_id="HEM2301566.1"
                     /translation="MPKMKTHRGSAKRFKRTGSGKLKRRHGFTSHMFANKSQKQKRKL
                     RKSAMVSAGDFKRIRQMVAKMK"
     gene            13281..13640
                     /gene="rplT"
                     /locus_tag="U0290_001523"
     CDS             13281..13640
                     /gene="rplT"
                     /locus_tag="U0290_001523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L20"
                     /protein_id="HEM2301567.1"
                     /translation="MPRVKGGTVTRKRRKKIVKLAKGYYGSKHLLFKVANQAVMKSYQ
                     YAYRDRRQKKRDFRRLWIARINAAARMQDLSYSKLMHGLKLAGIDINRKMLADLAVND
                     IASFNTLADSAKKALAK"
     gene            complement(13681..14436)
                     /gene="xth"
                     /locus_tag="U0290_001524"
     CDS             complement(13681..14436)
                     /gene="xth"
                     /locus_tag="U0290_001524"
                     /EC_number="3.1.11.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465307.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exodeoxyribonuclease III"
                     /protein_id="HEM2301568.1"
                     /translation="MKLISWNVNGLRAAVKKGFLEYFEEVDADIFCLQETKLQEGQIE
                     LDLPAYKDYWNYAVKKGYSGTAIFTKVEPLSVQYGLGVPEHDTEGRVITLEFEEFFMV
                     TVYTPNSQAELKRLDYRMTFEDAILEYVKNLDKTKPVVLCGDLNVAHEEIDLKNPKTN
                     RKNAGFSDEERAKFSAFLDAGFIDSFRYFYPDLTDAYSWWSYRMNARARNTGWRIDYF
                     VVSERLKDKLVDAKIHADVLGSDHCPVELELNL"
     gene            14520..15050
                     /locus_tag="U0290_001525"
     CDS             14520..15050
                     /locus_tag="U0290_001525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1697 domain-containing protein"
                     /protein_id="HEM2301569.1"
                     /translation="MGNYVVLLRAVNVAGKNKVNMKNLQAALQEVGFQNVITYIQSGN
                     LVLSSMLQTELEVATKITEVMKATFDLTIDVFVFSEQNYSQIIANNPFPPETIGEEER
                     WMAAFYNENIAIARQKNEQAEVIAIGRVLYIHIFSNQIHTLKLPVFLGEYKKTITTTR
                     NWRTTLQLQTLLDSQE"
     gene            15108..16340
                     /gene="pepT"
                     /locus_tag="U0290_001526"
     CDS             15108..16340
                     /gene="pepT"
                     /locus_tag="U0290_001526"
                     /EC_number="3.4.11.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465305.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidase T"
                     /protein_id="HEM2301570.1"
                     /translation="MKEELLKRFTKYVKVDTQSNEESKACPTTPGQMELANILVTELK
                     EIGMQEVTVDEFGYVMATLPSNTTKEVPVIGFLAHLDTATDLTGKNVQPQVHENYDGK
                     DIVLNKDLNVVLSPKQFPELADYKGKTLITTDGTTLLGADDKAGITEIMVAMNHLINH
                     PEIKHGKIRVAFTPDEEIGRGPERFDVEAFGAKYAYTMDGGPLGELEYESFNAAGAKI
                     TFNGNSVHPGTAKNKMVNAVKMAMEFNAHIPKDEAPEYTEGYEGFYHLISLNGDVEQA
                     KAYYIIRDFDHLKFVERKTHIASIAKELEEKYGEGSVELKLNDQYYNMREKIEPVKEI
                     VDIVSAAMRNLDIEPKISPIRGGTDGAQLSYKGLPTPNIFGGGENFHGKFEYVALESM
                     VKATEVIIEVARLFEEKE"
     gene            complement(16359..16721)
                     /locus_tag="U0290_001527"
     CDS             complement(16359..16721)
                     /locus_tag="U0290_001527"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301571.1"
                     /translation="MYETMIAKAGVRELLGMDTSLIYGSFAYKMEGEWMDLTGLWISN
                     ADALIFYLENEDVYLLKKFDYERIEKVEQKVSILSMTKKLILHLNNKESYTLLVANGE
                     AKVFTARVNERIEKVSLG"
     gene            complement(16771..17544)
                     /locus_tag="U0290_001528"
     CDS             complement(16771..17544)
                     /locus_tag="U0290_001528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301572.1"
                     /translation="MFAFENVCLKRDNKMILSDINWVVNDKENWAILGLNGSGKTTLL
                     QLLNGYLWPSSGNLQVLGHVFGQTSLPELRKSIGWVSNALDHQLKEYEFSEQIVLSGK
                     FASIGIYEKVTTAEIDQAKKLLTDCGGSTLIGKPYKILSQGERQIVLIARALMASPKL
                     LILDEPCNGLDLFAKERLLERIKKIAELPESPTMLFVTHHTEEILPCFDNIILLRDGE
                     ITHHGKTENLLTEEVLQDFYQKPVELIRIKDGSIAVYPK"
     gene            17613..18218
                     /locus_tag="U0290_001529"
     CDS             17613..18218
                     /locus_tag="U0290_001529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM2301573.1"
                     /translation="MKQEEIIIAAQKWMQSHFEKETTGHDWEHIKRVWHLSKQIQATE
                     GGDKFAIELAALFHDYNDSKLTSDPAQATEVITHWMKGKEIPEEVISKIIRIIQSVSF
                     KNGKNPTQASTIEEKIVQDADRLDAIGAIGIARTFTYGGAHNREIANRDHPENTTLQH
                     FYDKLLLIQKQLKTKTGRELAGEKQKIMQEFIHALEKELKI"
BASE COUNT         6119 a         3494 c         3739 g         5009 t
ORIGIN      
        1 ggttataaca gctaatgtta ggtccgaaaa cgaagggagg gacattgggc tgaaatggtt
       61 ggaatctgat attggataaa ggttcagggg atacttaata gttagcttat taggaaaaca
      121 taatttaata cctttattct gttttcagtt atttttcaaa atcaagaacg attgattttt
      181 aagggggaaa aatgatgaaa aaacagcgtg tagattacaa acggagatta gaccaaaagc
      241 gagcgcaaaa agcaaaatta attgcggcgc ttattacgac aacaacgatg atggtagcgc
      301 ctgtcactgt gaattacgat tcttttaatc accaatttgc cctaagtggt attcaagcgg
      361 atgcggcaac aattgattta ttaggaaatt ctaatttgaa tacacagtat tctaatggga
      421 aattagtgat tactctttct gggaatcagt tagttagtgc tagtgcagta tccacgtact
      481 atccatactt tgaactacca agtgaacttt cttctatttt aagtaatcca aatataagag
      541 caaatacgaa aattgattat aaaattgctt atttaggaat tggcggtatt ggattattta
      601 atcaaggtac agtaaatgga agtaactcaa gcaatttctt tattgattct agtagaaatg
      661 cggttggtgc aaaagtaaat cacttactgg gagttggagt tggtagtata tctactttca
      721 ctttgacaat tgatttgcta gcgcttggcg taactgcgct acctagtgcc aatgatggaa
      781 aattagattt tgctgctaga actggtgatg ggcttttgga tgttgatctg ttgaatagta
      841 atgcggctcg tgggtttatt actacggatg ttggggatgc cgacgctgac gccgatgctg
      901 acgctgatgc ggatgccgac gctgatgccg acgccgatgc ggatgctgac gccgatgctg
      961 acgctgatgc cgacgccgat gcggatgcgg atgcggatgc tgacgctgat gctgatgccg
     1021 acgctgatgc ggatgcggat gcggatgccg acgccgacgc tgatgctgac gccgatgctg
     1081 acgccgatgc ggatgctgac gctgacgccg atgctgacgc cgatgcggat gctgacgccg
     1141 acgccgacgc tgatgctgac gctgatgctg atgctgatgc tgacgctgac gccgatgctg
     1201 acgccgatgc tgatgctgac gccgacgctg atgctgacgc tgatgctgat gctgatgctg
     1261 atgcggatgc cgacgctgat gccgacgctg atgcggatgc tgatgcggat gccgacgctg
     1321 atgccgacgc tgatgcggat gccgacgctg atgcggacgc cgacgctgat gcggacgctg
     1381 atgcggatgc cgacgctgat gctgacgccg atgctgacgc tgacgctgat gcggatgctg
     1441 atgctgatgc tgacgctgac gccgacgctg atgcggatgc cgacgctgat gcggacgctg
     1501 atgctgatgc tgatgcggat gccgacgctg atgcggatgc ggatgctgac gccgatgctg
     1561 acgctgatgc ggatgctgac gccgatgcgg atgcggacgc tgatgcggat gccgacgctg
     1621 atgctgatgc cgacgctgat gctgatgctg atgctgatgc tgatgcggat gccgacgctg
     1681 atgcggacgc tgatgcggat gccgacgctg atgcggatgc cgatgcggat gcggacgctg
     1741 atgcggatgc cgacgctgat gctgacgctg atgcggatgc cgacgctgat gctgacgctg
     1801 atgcggatgc cgacgctgat gcggatgccg acgctgatgc ggacgctgat gccgacgctg
     1861 atgctgatgc tgatgcggat gcggatgcgg acgccgatgc cgatgcggat gctgacgctg
     1921 atgctgacgc cgatgcggat gccgacgccg atgcggatgc ggacgccgat gccgatgcgg
     1981 atgcggatgc tgacgccgat gccgatgcgg atgccgatgc cgacgtagac attgactgga
     2041 gagatttcct agttgaaaaa ccaactgtaa atccaattta cgaaggaact aaaacaattt
     2101 caggtacttc catttataaa aatatgaata taaataccct tctgaaatca ttgcaatcag
     2161 atgcaccggc tggaacaact ttctatatta atttgactct tccggacggt actgttatcg
     2221 gaaatgtctt aatccatgca gatggaacct atactattaa tattcctaat tataatttga
     2281 aagctggaga tgttattcat cttcaagtaa cagctaaata tggtaatgaa gttaaaacga
     2341 gtgaagatgt agccgtaact gtcctaccat tagcagattc tgatgccgac gctgatgcgg
     2401 atgccgacgc tgatgcggat gccgacgctg atgcggatgc ggatgcggat gcggatgctg
     2461 atgccgatgc ggatgccgat gccgatgctg atgccgatgc ggatggtgga tcaaatcctt
     2521 ctaccaatgg aggaactact ggaacttcta acggaggaac tggcgtaacc gttacgaaca
     2581 tgagttcaaa tggttcagga acaatgcttt cctcaggtta tagcgcggat ggaacaactt
     2641 ctatctcagc aagtgatctt ccttcaactg gagatacaaa cagtagtctt ccgtgggttg
     2701 ggcttggtct cttctcgcta gctggcgcgt ttttactacg tcttttccgt aaataagagc
     2761 cacaatacaa cgattccctg tcgctaagaa aatttagcgg cagggatatt ataaaaagga
     2821 gtggtacata tgccttggag aggtatatta gatgaacttg aaaataaaat tattgatcaa
     2881 ttaacagaag acgaagaaca cgccacttac aacgggaaat ggcatggctt tctaacaatc
     2941 ggctataaaa ataaacgagc tattgtcata aactttagct atctttgcct agccaactta
     3001 attaatgaaa tgaaaaaaag tgcaataaaa aaccaaaccg aagaggcaat ttcttttaaa
     3061 attgatgttg ctgtggatta tcgacttgaa aatttaggag aatggaataa aaaagcttta
     3121 aaaacgaaga aaaattatta tagaagaggc attgccttaa atgaaaattt taaaatagct
     3181 ttaatggaac aagaaattaa tgcgaacgct atccttctac caggtgatga aggtttagct
     3241 atcaacgttg aaaatatgaa tagatattta atccaaacaa ataaaaatca agctcaatta
     3301 aacttaaccg tagattccac tattgttact tttaatacag taggatggtt ttttgacgga
     3361 aagaaaatcc atgagttaga accaagcgag cttgagcatg gtcgtagaag tactaaacaa
     3421 ttaactccag atgcagtttt tgaactagtt ggaaacgctg gaaattattt agtgagccaa
     3481 gtaaatcaaa cgggcgaatt caattacggc tggtttgctt gctttgataa aaaaattaaa
     3541 cactataata gtttgcgcca cgcgagtaca acttattcga tgttagaagc atacgaatta
     3601 acaggcgata aaacaatttt ggaagcagct acaagcactt taacttattt agagcaaaac
     3661 tttatttatg aaaaagacga attagctttt ttaattgaac cagggttgcg tgaagttaaa
     3721 ttaggcggtt cagcggcgac attgcttgct ttaacgaaat atatgaaaat cactggaact
     3781 aaaacctatt tgccactatc taggaagatt gcgaatgcga ttatttcctt acaagaagaa
     3841 aacgggaagt tcacgcatgt gttggagtat ccctctttag aagtaaaaga tattttccgg
     3901 attatttatt acgacgggga agctgtgttt ggcttgttgc gcttatatga aattgaccgt
     3961 gattccaaat ggctggaggc agcggcaaaa tcttttgacc atttcattcg tgatgactac
     4021 tggcaaaacc atgatcactg gctgagctac tgcgccaatg aaatcactaa atatattcca
     4081 gacgaagctt actacgaatt tggaatgaaa aatgctttcg acaacctacc atttatttat
     4141 ggacgcgaaa ccacatttcc aaccttttta gagcttactg ttgctacaaa agagatgtcg
     4201 ctacggatgg aaacagagga cttgcaaaaa ctgcttcatg actatccact agctgaattg
     4261 gaaaaaacaa tcactaaacg agctatctac cagttaaatg gctattttta cccagagcta
     4321 gcaatctact acaaaaatcc agcgcgaata gatggcagtt tcttcattcg ccaccagtct
     4381 ttccgggtta gaattgatga tgtggagcat aatatttcag gatatgtgcg ttaccaccac
     4441 cttctaaaac aagggaaact aagtgctgaa gccgaaaccg tcaaataaaa agaaaaaaat
     4501 tccctctgta aagaaaaaac actttacaaa caaatccttt actggtaata tatatacttg
     4561 tgtaagactt tatggaggtg taattaaact atggcagtta aaattcgttt aaaacgtatt
     4621 ggttctaaaa agaaaccttt ctaccgtatt gtagtcgctg attctcgttt cccacgtgat
     4681 ggccgttcaa tcgaaactat tggtacttat aatccattac ttgatccggt tgaagtgaaa
     4741 atcgacgaag aagcaacttt gaaatggatg cataatggtg cgaaaccatc tgatacagtt
     4801 cgcaatcttc ttagccgcga aggtatcatg gaaaaattcc ataaccaaaa attaggtaaa
     4861 taaggaggtc tcggcgcgaa tggaagaact cattctctca atcgtgaaac ctcttgttga
     4921 ccacccggaa gacgttgtta tcacgccaga agaaacggat acatcgttaa cctacaaatt
     4981 gtctgtcagt aaagaagaca tgggacgcgt gattggtaag caaggtcgta ttgcgaaagc
     5041 gattcgtacg cttgtctacg cagttggctc caaaaacgat aagaagattc gtcttgaaat
     5101 tatcgaataa caaaaactcg tcaatttggc gagttttttt ataactattt ttaaataatc
     5161 atcagagaag caattacctc actaaatgtt gtaaaataga atagaaatgg aggaattgtg
     5221 atgaagccag ttattggaat taccggaaat agattagtaa aaggtgtgga cgttttttac
     5281 ggacaccgtg tgacttatac gcaacagcga tatgtagatg ctattcaaaa agttggcgga
     5341 tttcctatcg ctttgccaat agatgacccg tctgttgccg ttcaagcaat ttctctcgta
     5401 gatggtttgc ttttaaccgg tggacaagac attacgccac aattttattt agaagagccg
     5461 tcccaagaaa tcggcgctta ttttccacct cgggacagct atgaaatcgc cttagttcga
     5521 gcagcattag acgctggaaa accgattttt gctatttgcc gcgggatgca actagttaat
     5581 gtggcgttag gcggctcact ttatcaagat atcagccaag tcgaaacgaa agccctccaa
     5641 catttgcagc gcgtcgatga acaactcggc tctcatacaa ttgatattga accgacaagt
     5701 gaactcgcaa agcatcaccc gaataaaaaa ttagtcaatt cattgcatca ccaatttatc
     5761 aaaaaattag cgccaagttt taaagtaaca gcgcgtactg cggatggaat gattgaagct
     5821 gtagaaggtg acaatttgcc aagttggtat ttaggtgttc agtggcaccc agaattaatg
     5881 ttccaaacag atccggaaag tgaacaatta ttccgggcat tagtagatga atccaaaaaa
     5941 actatggtaa aataaggaca taatcgctag tggaggtgtc cagtggaaat catccaaaaa
     6001 gttgtcgtca aacaaattct aaccgaagca agtaaacaag aattaatcga gtattatacc
     6061 gagcaaaaac gacaaatcga acaagaatgc gatcagttgc attttgaaca aaagaaaatg
     6121 gaacgaaaaa gcaaatttca accagaacga gtggccgatt actttaccca cgaactcgac
     6181 ctgcgccgag aaaagaaaaa actaattcag tttcaaatgg aacaattaga agtcctcgaa
     6241 cttggcagtg aaattcgcga acgagaaatg gaaacgatta ttgatgtaca agtaggagac
     6301 aagtgggata aatccatttt tgataaaacc attgttgtaa aagatggaat catagtagaa
     6361 atacgctaga ggtgacttat ggagaaaatg tataatgtag gaaaaattgt taatactcat
     6421 ggcttaatcg gtgaaattcg agttatcgca acgaccgatt ttccagaaga acggttccaa
     6481 gttgggaata ccgtgtactt atttgaaaaa aacagcaaaa agcctgaaaa actaatcatt
     6541 cgctcacacc gcaaacataa gaactttgat ttgctgatgt ttgaaggatt cactggaatt
     6601 catcaagtgg aacgtatgaa agaaggcgta cttaaaatca aagaagcgca actaactgat
     6661 ttagaggaaa acgaatttta ttttcatgaa atcatcggtt gtatcgttgt aactactgac
     6721 ggcgaagagc ttggcgaaat cacagaaatt ctaacaccag gcgccaatga tgtatgggtt
     6781 gtaaaaggca gcgacaaaaa agaaaaacta attccttata ttgccgacgt tgtaaaagaa
     6841 atcaatatta atgacaaaaa aattacaatc gaagtcatgg aaggactgct agattaatga
     6901 aaattgacat tctatccatt ttcccagata tgttttcggg agtgaccgga aattccatta
     6961 taaaaaaagc catcgaaaat gagcgtgtcg cggttgaagt gactgatttc agggaatatg
     7021 cagaaggaaa gcatcatatt gtcgatgatt acccttatgg tggcggggca ggtatgttac
     7081 tcaaagcgca accgatattt gatgccgttc aagctgtcaa agagaaacaa ccagaaacaa
     7141 agccaagagt tattttaatg gacccagcag gcaaacgctt cgaccaaaaa atggcagaag
     7201 aatttgccga agaagagcat cttgttttta tttgcggtca ctatgaaggt tacgacgaac
     7261 gaattcgcga acaccttgtt acggatgaag tgtcgattgg agattacatt ttaactggtg
     7321 gcgaaattgg tgcaatgatt gtaatggaca gtgttatccg acttttaccg ggagtacttg
     7381 gtaataaaga ttccgctgtg acagattctt tctcgaccgg tttgcttgaa catccacact
     7441 acacgcgacc agccgatttt agaggaatga aagtgccaga tattttactc agcggaaatc
     7501 atgcatggat agaagaatgg cgcgacaaag aatcgctcaa aagaacctac gaacgccgcc
     7561 cagatttact taaaaactat cccttaacag acaagcaaaa aacttggctc aaagaatggt
     7621 ctgacagtaa ataatcaaag gacgtgattt taaatggcaa tttttggaac acctgatgaa
     7681 aaagaaacca aaaaatccga gcgtcaaaaa gaacgagaag cctatgtaca agaagaaaat
     7741 gaccaaaagc gaattgggca aagatggcaa gacatacaag tttccactgg accgattaat
     7801 gtgaatcatg atatcctcac ggttgttttc gccaaaagtg tccgcccaag aatcaaaagt
     7861 gatccagaag catacttaga aacagtgggc tttgaaaatt tactacagga attacaaaag
     7921 aaagcattag atgcaggcgg gaatggctta attcactgtt cgtttaccga gcaattcgtc
     7981 gatggcctcg tttatcaact cgcatatgga acagccgtaa acatcaaaat tacgagattc
     8041 taaaaaaaga ctagaaagcc agtaattggt tttctagtct ttttcatttg ttgcttgttt
     8101 ctttgctcgc tttagtacat tcgttaagtc aaaatcagcc atcgctttca ccggtccatg
     8161 cccacaagca atttccgtca catcgaaaag ctgtaaattt tccgccgatg cgatacttgt
     8221 tggaagatcc caagaaccca tcgctggaaa agggaacaac catcgcttct ccccacaaat
     8281 agccgctcct ccacgagttt gaaataaatc tcctacaaat aaatgcccat tacgctcatc
     8341 aaaaaaggaa atggagccag gtgtatgtcc cggcgtatcg ataattaaca gggagccaat
     8401 catatcacca tcttttaaaa tgtgatcaat gcttactgga agttgatctg aataaccgcc
     8461 ttttaacggc ttctgtgctt caaaagcata aatttctttc gtttctacaa gcaatttttc
     8521 tctgcttcca atcattacaa gcgcttctgg aaaagctgct ttcactgcga ctaaaccgcc
     8581 aatatggtca ccatgcgcat gcgttaataa aatccgtttt aaaggtaaat ttaatttgtg
     8641 gatgagtgca atgattcctt tcgcgttcga caaaatccca gtatcaatca atgttaagcc
     8701 gtctttttct aaaattaagt aacaattcac cggaaaaaga tacggcaatg tcgtaatttg
     8761 ccaatattga tgtttggcag taattttcat gcaaaaacct tctttctaat ttgctttttt
     8821 agcaagaatt gaatatcgcg ttttgctgca cgtgtaactt ttttatcata gtagtcatca
     8881 gtccttctga tagaaagatc cagtcgatca attgaagtca ctttcaccga aaacacgcca
     8941 ctcatccata atgggtaacg caaggcagta agagcagggc gggcgaaaag tcgatgttgt
     9001 atttccattc cgccaatcgt ataaatcaac cgcgctcgtt tttttcgcca aggtccagta
     9061 agaaaatatt ttttatcttt aaaactatag ctctccccag gccaaaacaa atgatcaata
     9121 acacctttta acacagccgg aacgttaaac caccaaaccg gataagaaaa tagaagtaaa
     9181 tcagcggaac gaacatcatt tttaagcgca attatgtcag gggtttgctc cgtacgatag
     9241 ccttcaggta aattagggtc aaaagctaat ttgcggatat catagatttt tacctcgatt
     9301 gttggttgtt cctgaaaaac agctaaatac ttctgaaaca aatctcttga tgtacctttt
     9361 tcccgtgggt caccaataat cgccacaatc ttagccatta gaacccgtcc tttctgatgt
     9421 cagtaaaaat atgctccaca aaagtgttaa catctttttg aacagtgctg taatcttgga
     9481 cctcgtcaat ttgcggcaat tcttctaaaa gagcagcgat ttttgtatag tgtgcaatcg
     9541 tctgtttgat ttccgctgct ttaagcgcaa gtaactcttt tgatgccgta ttacaagcga
     9601 cagaaggctc gcttctcaac cattccatca tcaattttat ttcagaaaga gaaaatcggg
     9661 catatttcat tactaaaata aactttaatt ctaatagatg ttccgtgtta tacacacgat
     9721 acccgttttc cagccgatta ggtacaatta tcttgttttt ttcataatat cgtaatgtat
     9781 ccgctgaaat acctacataa gcagccattt cttttactgt ccattgttcc atctctgaca
     9841 cctccatttg atatactaaa ggtaacatta aaccatactc caaggtcaag cttttttatc
     9901 aaaagaaaaa gtaagaaaaa aactttacag cgaaactagt ttatggtaac ctaaataagg
     9961 tgactggaga gaccagtctg ataacgatat tccgcttcat tattaatatg aatgaatgtt
    10021 tgttggaagg agagaaaaac atgaacaaac tgattgatga aatcacaaaa agtcaactaa
    10081 acccagatgt tccaaatttc cgtccgggtg atactgtacg tgtacatgcg aaagtagtcg
    10141 aaggtactcg cgaacgtatc caattattcg aaggcgttgt aatcaaacgt cgcggagctg
    10201 gaatcagcga aactttcact gttcgtaaaa tttctaacag tgttggcgtg gaacgtactt
    10261 tcccagtaca tactccacgt atcgcaaaat tagaagttat tcgtcgtggt aaagtacgtc
    10321 gtgcgaaact ttactaccta cgtaacctac gtggtaaagc ggctcgtatt aaagaaattc
    10381 gttaatcatt taacggctga aacccttgag aaatcaaggg tttttgtttt gcttggaatt
    10441 agaatgctaa aatgtgaaat tttcaccttt cgtttttact tacaaaagtg ggggtgttcc
    10501 aatagggaaa atcgttttgt caaattatgc gttacacttc aaaggtgggg cttgggatac
    10561 tgcggcatag aaagtagagt ccgccaaaac caaaacgaca gataaatatg cgcggaaagt
    10621 tgggtatgac ttacatggtc cgggatggta tactatacaa gcgtatggtt caaaaagata
    10681 ctttgaatta agaagtacaa gaaagttaac ttcattagac aaaaagaaaa aacaggcaag
    10741 aatagtacat agttataaat actgtggaga gtgaggtgta atatgggagc agctgatttt
    10801 tggggtttca tatatgtagt ttcaagatag ctattgttgc ggcagtggtt tacttcttat
    10861 acttattgag aaaaattgca aataaataga aaaaaagcct tgtcaaacga ggcttttttt
    10921 tatgcaaaaa atacgacgaa tgaagccatg tgagacaact tggactagca gacaacaaag
    10981 aaggtagaac atgttttgaa aaatttactg attttcgatt atttttaacg cttgttaatt
    11041 taaacatctc ttatttttgc taacatataa gtatacaaag ggacataaaa gattcacagc
    11101 gtttgttaaa taggaagtat atgaaaatcc tcttttgtgt ttctaaattt atttttaagg
    11161 agtggagaat gttgaaaaaa aataattggt tacaaaatgc agtaatagca atgctagtgt
    11221 taattgtagg tctgtgcatt aatacgggtt ctgggacaaa agtacaagct gagagtattc
    11281 aacgaccaac gcctattaac caaatttttc cagatcccgg cctagcgaat gcagtgaaac
    11341 aaaatttagg aaagcaaagt gttacagacc ttgtatcaca aaaggaacta tctggggtac
    11401 aaaatttcaa tggagataat agcaacatta aatctcttgc cggaatgcaa tttttcacta
    11461 atttaaaaga acttcatcta tcccacaatc aaataagtga ccttagtcct ttaaatgatc
    11521 taactaaatt agaagagcta tctatgaata gaaatagact gaaaaattta aacggaattc
    11581 caagtgcttg tttatctcgt ttgtttgtag ataacaacga actccgagat actgactcgc
    11641 ttattcattt gaaaaatcta gaaatcttat ctattcgtaa taataagcta aaaagtattg
    11701 tgatgcttgg ctttttatct aaactagagg tattagattt gcatggtaat gaaataacaa
    11761 atacaggtgg actaactaga ttgaagaaag ttaactggat agatttaact ggtcagaaat
    11821 gtgtgaatga accagtaaga taccaaccag aattgtatat aacaaatact gtcaaagacc
    11881 cagatggaag atggatatct ccatattaca tcagtaatgg agggaattat gtagatggtt
    11941 gtgtcctgtg ggaattgcct gtttatacaa atgaagtaag ctataagttt agcgaatata
    12001 taaacgttgg ggagactgag gctatatttg atggaacagt tatacaacct attcagaatt
    12061 aggacttatg catacatgtt tgatgttttg aatggatatg cacactgtat acttttagct
    12121 ctcgtatagt cacgagagct ttttcaatat gaaagtttta actgcctttt gacagaaaga
    12181 acgtttattc gtataagatt gcccagaggt aaagaaacta ttttatttac aattcacctt
    12241 gacaccaaaa atcccatatg atatagtaag taaggttatt aaacaagaaa gaagaagcaa
    12301 cccgcttctc gcctcgttaa cacgaacgtt ttcaggcaaa aaattcaaac tttcgtcgcg
    12361 taacttacgc gattttgaat gtgcgggatt gctgaaaagc agcccgtttt tttatggcct
    12421 ccgaacgaat gagttagcag gccgcagatt tgaacagcta ttttctatct tgttgtaaca
    12481 aaattaagtg gaggtggctc accattagca aagacatgtt ggtaaacgat gggattcgtg
    12541 cacgtgaagt aagattgatc gaccaagacg gtgaacaatt aggcgtgaag agtaaaatcg
    12601 atgcgcttca aattgctgaa aaggctaatc ttgatctagt gcttgttgct ccaacagcga
    12661 aaccgccagt agctcgtatc atggactacg gtaaattccg ttttgaacaa cagaagaaag
    12721 ataaagaagc ccgtaagaac caaaaagtca tcgtgatgaa agaagttcgt ttaagtccaa
    12781 cgattgacga acatgacttc gatacgaagc tacgtaatgc acgtaaattc cttgaaaaag
    12841 gcgataaagt aaaatgctct atccgtttta aaggtcgtgc cattacacac aaagaaatcg
    12901 gtcagaaggt gcttgaccgt tttgcaaaag cgtgcgaaga cctttgtaca attgagcaaa
    12961 gaccaaaaat ggacggacgt tccatgttct tagtcctagc accacttcat gaaaagtaaa
    13021 gttttgagga ggaaaaattc atgccaaaaa tgaaaaccca ccgcggttcc gctaaacgtt
    13081 tcaagagaac aggatctgga aaattaaaac gcagacacgg cttcactagc catatgttcg
    13141 ctaacaaatc ccaaaaacaa aaacgtaaat tgcgtaaatc tgcaatggta tcagctggcg
    13201 acttcaaacg tattcgtcaa atggtcgcta aaatgaaata agagaaacaa catttttgta
    13261 aattctagga ggtagacaat atgccacgcg taaaaggcgg aacagtaaca cgcaaacgtc
    13321 gtaaaaagat agttaaatta gccaaagggt attatggctc taaacattta ttattcaaag
    13381 tagctaacca agcggtaatg aaatcttacc aatatgctta tagagatcgt cgtcaaaaga
    13441 aacgtgattt ccgtagatta tggatcgcac gtatcaatgc ggcagctcgt atgcaagatc
    13501 tttcttacag caaattaatg cacggcttaa aattagctgg tattgatatt aaccgtaaaa
    13561 tgcttgcaga cttagcagtt aatgatatcg catcattcaa cacacttgct gattcagcaa
    13621 aaaaagcatt agctaaataa ttcaaaaatc ctcactcttt ggagtgagga tttttttagg
    13681 ttataaatta agttctagct cgacaggaca atgatccgaa ccaagcacat ccgcatgaat
    13741 tttggcatcc actaacttat ctttcaaacg ttccgataca acaaaataat caatccgcca
    13801 accagtattc ctagcacgcg cgttcattcg gtaagaccac caagaataag catcggtcaa
    13861 atctgggtaa aaataacgga aactatcaat aaatccagca tctaaaaatg cagaaaattt
    13921 cgcgcgttcc tcatccgaga agccagcatt tttacgattt gtcttcggat tttttaaatc
    13981 aatttcttcg tgcgcaacat tcaaatcgcc acaaagcaca accggcttcg ttttatccaa
    14041 gttttttaca tattccaaaa tcgcatcctc aaacgtcatc cggtaatcta atcgttttaa
    14101 ttcagcttgc gaattcggcg tataaaccgt caccataaaa aattcctcaa attcaagtgt
    14161 gataacacga ccttctgtat catgttcagg aacccctaaa ccatattgaa ctgataacgg
    14221 ctccactttt gtaaaaatcg cggtaccaga ataacctttt ttcaccgcat aattccagta
    14281 atctttatat gctggcaaat caagttcaat ttgaccttct tgtaatttag tttcctgcaa
    14341 acaaaaaata tccgcatcta cttcttcaaa atactccaaa aagccttttt ttacagctgc
    14401 tcgaagcccg tttacattcc aagaaattaa tttcacctaa aaaacctccc atcgctaata
    14461 gccttattat aacgtaagtc acatgctata atgtagttaa acgattggga gggagataga
    14521 tggggaatta tgtagtgtta ttaagagcag taaatgttgc tggaaagaat aaagtaaata
    14581 tgaaaaatct acaagctgct ttgcaagaag taggtttcca aaatgtcatt acttatatcc
    14641 aaagcggcaa cctcgttcta agctccatgt tacaaacgga actagaagta gcgacaaaaa
    14701 taaccgaggt aatgaaagca acgttcgatt taactattga tgtattcgta ttttcggaac
    14761 aaaattatag ccaaatcatc gcaaacaatc catttccacc agaaacaatt ggcgaggagg
    14821 aacgctggat ggccgctttc tataatgaaa atatcgctat tgcgagacaa aaaaacgagc
    14881 aagccgaagt aatcgcgatt ggtcgcgttc tttatatcca cattttctcc aaccaaatcc
    14941 acaccttaaa attaccagtt ttccttggcg aatataaaaa gacaataaca acaacgcgca
    15001 attggcgaac aaccctccaa ttacaaacac tactcgacag tcaggaatag aatttttcga
    15061 aaatcaagtt tataatgaaa aagaatcaat ttaagggagt ggtcggaatg aaagaagaac
    15121 tattaaaacg atttacgaaa tatgtaaaag tagatacaca gtcaaatgaa gaaagtaaag
    15181 cttgtccaac aacaccaggt caaatggaac tggcaaacat tctcgttaca gaactaaaag
    15241 aaatcggtat gcaagaagtt actgttgacg aatttggtta tgttatggca acacttcctt
    15301 ctaatacaac gaaagaagtt ccagtaatcg gatttttagc tcatttagat acagcgacgg
    15361 acttaacagg caaaaacgtc caaccacaag tccacgaaaa ttatgatggt aaagatatcg
    15421 ttctaaacaa agacttaaac gtggtacttt caccaaaaca atttccagaa ctagctgatt
    15481 ataaagggaa aacactgatt acaacagatg gaacaacgct actcggtgca gacgataaag
    15541 cgggcattac cgaaattatg gtggcaatga accatttaat taaccatccc gaaatcaaac
    15601 acggtaaaat tcgtgttgct ttcacaccag atgaagaaat tggccgagga ccagaacgtt
    15661 ttgatgtaga agcatttggc gcaaaatatg cttatacaat ggacgggggc ccacttggag
    15721 aactagaata tgaaagtttt aacgctgcag gtgccaaaat cacttttaat ggtaatagtg
    15781 ttcaccctgg tacagcaaaa aacaaaatgg ttaatgctgt caaaatggca atggaattca
    15841 atgcacacat tccaaaagac gaagcgcctg agtacacaga aggttacgaa gggttttatc
    15901 atttaatttc cttaaacggt gatgtagagc aagccaaagc ctactatatt atccgcgatt
    15961 tcgatcattt gaaatttgtg gaaagaaaaa cacatattgc tagtatcgcc aaagagttag
    16021 aagaaaaata cggcgaagga tcggtagaat taaaactgaa cgatcaatat tacaatatgc
    16081 gcgaaaaaat cgaaccagta aaagaaattg tggatatcgt cagcgcggcg atgagaaatc
    16141 tagacattga accgaaaatc agcccaattc gtggcggaac agacggcgct caactttcct
    16201 acaaaggact accaacacct aatatttttg gtggaggaga gaacttccac ggtaaatttg
    16261 aatatgttgc attagaaagt atggttaaag caacagaagt aatcattgaa gtggctcgtt
    16321 tatttgaaga aaaagaataa taaaaaagtg agtctagttc atcctagact cactttttct
    16381 atgcgctcat ttactctagc agtaaagacc tttgcttcgc cgtttgcaac aagtaacgta
    16441 tagctttctt tattattaag atgtaaaatc aattttttcg tcatggaaag gatacttact
    16501 ttttgttcta ctttttctat tctttcataa tcgaatttct tcagtaagta gacatcttca
    16561 ttttctaaat aaaaaatcaa cgcatctgca tttgaaatcc aaagtcccgt taaatccatc
    16621 cattcgcctt ccattttata agcaaatgaa ccataaatca gactagtatc catcccgaga
    16681 agctcacgta cacctgcttt tgcaatcatc gtttcataca aaacatttcg cccctctaca
    16741 tacgcatttt tcgtattcta actataccat ttacttcgga tagactgcaa tggagccgtc
    16801 ttttatccga attaattcta ctggcttttg ataaaaatct tgaagaactt cctctgtcaa
    16861 aagattttct gtttttccgt gatgagttat ttccccgtca cgcagtaaaa tgatattatc
    16921 gaagcaggga agaatttctt ccgtatggtg agtaacaaaa agcatcgttg gggattctgg
    16981 cagttccgct atcttcttaa ttctttctaa taagcgctcc tttgcaaata gatcaagccc
    17041 attacaaggt tcatctaaaa taagtaactt aggacttgcc attaaagcac gtgcaattaa
    17101 aacaatttga cgctctcctt gcgataaaat tttatacggc tttccaataa gtgtgctacc
    17161 gccacaatcg gtaagcagct ttttcgcttg gtcaatctcc gcagtagtga ctttctcata
    17221 aatgccaata cttgcaaatt tcccactaag tacaatttgc tcgctgaact catactcttt
    17281 cagctgatga tcaagcgcat tactaaccca accaatcgat ttacgtaact ctggcaaaga
    17341 ggtctgtcca aaaacatgcc caagtacttg aagatttcca ctgctaggcc aaagataccc
    17401 atttaaaagt tgcaacaaag ttgtttttcc agaaccgttt agtccgagta ttgcccagtt
    17461 ttccttatca ttaaccaccc aattaatatc cgataaaatc attttattat cacgctttaa
    17521 acaaacattc tcaaaagcaa acatcgaata ccccatttcc attttctact attgtacatg
    17581 aaaataacgt aaaaaaggag ccaatactaa tgatgaagca agaagaaata ataattgcag
    17641 cgcaaaaatg gatgcaatcc catttcgaaa aggaaactac tggacacgac tgggaacata
    17701 ttaaacgagt ctggcattta agtaaacaaa tccaagcaac agaaggcgga gataaatttg
    17761 caatcgaatt agcagcattg tttcacgact ataatgatag caaactaaca tcagatccag
    17821 cacaagcaac agaagtaatc acgcattgga tgaaaggaaa agaaattcct gaagaggtaa
    17881 tcagtaaaat catccgaatc atccaatcag tctcatttaa aaatgggaaa aatcctaccc
    17941 aagcttctac aatagaagaa aaaatagttc aagatgcaga ccgcttagat gcaattggtg
    18001 caattggtat agctagaaca tttacatacg gaggggcgca caatagagaa atcgctaatc
    18061 gagatcatcc ggaaaatacc acattacaac acttttacga taaattgctc ctaattcaaa
    18121 aacagctaaa aacaaagact ggtcgggaac ttgcaggaga aaaacaaaaa attatgcagg
    18181 aatttataca tgcactagag aaagaattaa aaatataact taaaaggctt gtatttaata
    18241 taaagctgtt atataatgat aaagctgaat tgatacaaat taattcatca aaaacatttt
    18301 aaaaatagtt gttgacgtga tttcaacttt atggtaagat ttaaaagttg cgttaacaaa
    18361 g
//
LOCUS       DASDYO010000054        18013 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.054, whole genome shotgun sequence.
ACCESSION   DASDYO010000054 DASDYO010000000
VERSION     DASDYO010000054.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 18013)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 18013)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..18013
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.054"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            79..1044
                     /gene="manX"
                     /locus_tag="U0290_001530"
     CDS             79..1044
                     /gene="manX"
                     /locus_tag="U0290_001530"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HEM2301574.1"
                     /translation="MVGIILATHGEFAEGILQSGTMIFGEQENVKAITLMPSEGPEDI
                     KAKMEAAIASFDSQDEVLFLVDLWGGTPFNQANGLYELHKDKWAIVAGLNLPMLIEAF
                     SSRFTMESAHEIAANILAPAQEGVRVKPEELQPQVTATEQPQAEIAAVGDGKIEFVLT
                     RVDSRLLHGQVATAWTKATHPTRIIVVSDAVAKDDLRKKLIEQAAPPGVKANVIPVQK
                     MIEISKDPRFGNTKALLLFENPQDVLRAIEGGVEIEQVNVGSMAHSVGKVVVSKVLSM
                     GKDDVETFEKLKEKGVKFDVRKVPNDSSANMEDIIKKAKHELKTQ"
     gene            1068..1874
                     /locus_tag="U0290_001531"
     CDS             1068..1874
                     /locus_tag="U0290_001531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463630.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HEM2301575.1"
                     /translation="MSVISIILVVLIAFLAGIEGILDEFQFHQPLIACTLIGLVTGNL
                     TACIILGGTLQMIALGWANIGAAVAPDAALASVASAIILVLGGQGVAGIPSAIAIAIP
                     LAVAGLFLTMIVRTLAVPIVHLMDRAAEKGNIRSVEWLHISAICMQGIRIAIPAAALL
                     FIPADSVQSFLEAMPAWLTDGMAIGGGMVVAVGYALVINMMATKEVWPFFVIGFVVAA
                     ISQLTLIAIGALGVALALIYLNLSKMGGGNSNGGGGGNSRDPLGDILNDY"
     gene            1896..2807
                     /locus_tag="U0290_001532"
     CDS             1896..2807
                     /locus_tag="U0290_001532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter family
                     subunit IID"
                     /protein_id="HEM2301576.1"
                     /translation="MAEKIELSKRDRLRVAWRSTFIQGSWNYERMQNGGWAFSMIPAI
                     KKLYKTKEDRSQALKRHLEFFNTHPYIASPILGVTLALEEERANGAEVDDVAIQGVKV
                     GMMGPLAGVGDPVFWFTIRPMLGALGASLALSGNILGPILFFVAWNVIRWGFMWYTQE
                     FGYKAGSKITDDLSGGLLQDITKGASILGMFVLAALVQRWVNIQFAPIISKVKLDEGA
                     YIDWSHLPQGAQGIKTALEQQQAGLALSEIKVTTLQNNLDNLIPGLAAVALTFLCMWL
                     LKKKISPIIIILGLFVVGIVGHLIGLL"
     gene            2934..3323
                     /locus_tag="U0290_001533"
     CDS             2934..3323
                     /locus_tag="U0290_001533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463632.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF956 family protein"
                     /protein_id="HEM2301577.1"
                     /translation="MVQSINTKVDLTIDATAYTGLTDYGKIMIGDKGFEFFNSRDVRK
                     FVQIPWEEVDQVIVSVMLKGKWIPRYAIKTKRNGTYTFASKRPKEVLRKIRVYVDPAN
                     MVSSLSFFDVMKRSFRSIFSKKKNKNK"
     gene            3445..3795
                     /locus_tag="U0290_001534"
     CDS             3445..3795
                     /locus_tag="U0290_001534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463633.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2200 domain-containing protein"
                     /protein_id="HEM2301578.1"
                     /translation="MKKPRIYTMSFASVYPLYIQKAEKKDRTKEEVDEIIFWLTGYDQ
                     DSLQQAIDQAIDFETFFAEAPKMNPNASLITGVICGYRVEEIEDKLMQQIRYLDKLVD
                     ELAKGKKMEKILRK"
     gene            complement(3836..5353)
                     /locus_tag="U0290_001535"
     CDS             complement(3836..5353)
                     /locus_tag="U0290_001535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polysaccharide pyruvyl transferase family
                     protein"
                     /protein_id="HEM2301579.1"
                     /translation="MRPTNVYTPEDIYLKDRTGFNNGNLAYQYSIYRALWNDDVEIHA
                     DGLSSNPNLAEKINENYDLYVMPLADAFRDDFRPVLRNYTQLIRKLKIPVIVTGVGLR
                     ANYEPQLDEGFSFDEDVTNFVKAVLEKSAQIGVRGQITADYLKKLGFNAELDFRVIGC
                     PSLYTFGREIKIRDFHLTDQSTIAINASPTSSEIAINFLNNMITTYKDYHFIPQHLDE
                     FHLMYAGGPDISSDINGYPTNIQHKYYQEGRVKYFTSMPSWFDFVKKVDFSIGSRLHG
                     NVIPTIVGTPNISFVQDARMRELASYHALPHVTIDELEKTNNLQELLTKVDLKSAEKV
                     QARNFDNYIDFLDTNGLNHIYKYDKNRKSAPMDELINSITFPTSPDPISILNPQEMLN
                     RVKISTNLLKERHDFSTRYRVNLVNNQLTQLKKTTSEQNKKYQQKITETQEKNQQLEK
                     QLTDTKQKLQLTINKNHELTNKIRHYQGTLNRKSVKTTLKVANSLANLKKKVSRS"
     gene            complement(5468..5761)
                     /locus_tag="U0290_001536"
     CDS             complement(5468..5761)
                     /locus_tag="U0290_001536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2301580.1"
                     /translation="MKKLNELSKSDLLLIFQALSDPIRLDIFLCLLKSKEKRFSGTTY
                     NISKSTMSHHIKLLKEAKLINLRKEGTTHIYSVNEALVEEIGYFFDACKHNHK"
     gene            5873..6163
                     /locus_tag="U0290_001537"
     CDS             5873..6163
                     /locus_tag="U0290_001537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM2301581.1"
                     /translation="MLHIEAQITVKKEQTEAFLQAAKEVIAASRAEAGNHGYELVQST
                     ENETVFYMLEKWADMEAIQQHNDSEHFKKFQKLAADFVAKELEISVLTPLAR"
     gene            6177..6809
                     /locus_tag="U0290_001538"
     CDS             6177..6809
                     /locus_tag="U0290_001538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463636.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEM2301582.1"
                     /translation="MTYVNNDFEDLMKNRRSIREYDETVKISQEEMKAILEDAVTAPS
                     SVNMQPWRFVVVESDAGKEKLSSLVRFNTRQNESSSAMILVFGDLENFENGEKIYGES
                     VERGLMPAEVKEQQMAKLSQYFASIPRTEAERVVLIDGGIVAMQLMLVARAHGYDTNP
                     IGGFERKEVAEAFNMDPERYVPVMIVSIGKAKNSGYQSYRLPITDVTTFA"
     gene            6905..7276
                     /locus_tag="U0290_001539"
     CDS             6905..7276
                     /locus_tag="U0290_001539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301583.1"
                     /translation="MTIKITRKTGIGSGITPVKIRIENEEIVKLDNHQSHFFMPKMEK
                     TKVCVTNWFYGSQEAVLENNNDVIVRINRKALILNYSMFPFLFFGLLATSWESTVIAL
                     ILCLASFFYSRKHWFEFVKIK"
     gene            7567..9837
                     /gene="chiB"
                     /locus_tag="U0290_001540"
     CDS             7567..9837
                     /gene="chiB"
                     /locus_tag="U0290_001540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chitinase ChiB"
                     /protein_id="HEM2301584.1"
                     /translation="MKKLFSITSVVLLVLSLVVVSIGAEPKRAKAAENVPQYRNVMYY
                     GDWSIWGGEGNFYPKDIPADQLTHLNFAFLDFNSNGDLVFTDKDAAVGAPVGQEGVQW
                     GGANAGVLNAIQDLRAQNPNLKIGVSVGGWSKSGDFSTVAADPTKRANFVKNVMKFVK
                     YTNMDFVDLDWEYPASVRDADLVDNKNDEGTPNAKPADKQNFITLLQDLRTALDKQGV
                     DINKKYELSVALPAAKSTLENGIDVANLFKVVDFANVMTYDLNGAWTPNSAHHTALYG
                     NPKDPNYDSGFSVDQTVKYLKEKGAVSNKIVVGAAFYTRGWNKVAAGTDTALPGLFQA
                     AEKTNKDADGSLTYGANNENPIKTGDGGRAGGVWAYRSIDALKAKTPTLKEYWDDTAK
                     APYLYSKETGEFYTYDNTRSIGYKAQYVKDNNLGGMISWMQSQDKTTTSTKRDELTKA
                     IKSGLFGTNAIPQNAITYANLNVVATVKPYSENGVGYEITITNNEKADETNEVLKSTE
                     LSFETVKLPKFYIPVKAGETLTAGDYKAGTVTTSGGNTVVDLASVYDAQQIPQGASYT
                     FRLKSSASSVDVANISKIDLTQRMVKSSVEFGKQTIFGGGTVVPDPSDTEAPTVPKAL
                     TSSNVTDKSATLTWTASTDNKAVAGYKVYRNGTEVGSVSGTTFTDSGLTAKTAYSYTV
                     KAYDAAGNFSAASSALTVTTLDAATPPATPAWDAAKTYNKGDRVSYKGKTYEAQWWTQ
                     GNEPGAEQWGPWLLIN"
     gene            9940..10842
                     /locus_tag="U0290_001541"
     CDS             9940..10842
                     /locus_tag="U0290_001541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463639.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM2301585.1"
                     /translation="MYFVYDIGGTFVKFALMENNGTVKMKDKFPTTAKSAEELVAQMV
                     EKWRPYSTEVKGIAVSCPGVVDTEKGVIYQGGSLLFMHEKNLAEMLARECHVPVVLQN
                     DAKSAALAELWLGVAKNVHSAAILTLGSGVGGGIIMDGKLQSGYHLMAGEVSFMETSF
                     DTKKLRGTFFGRTGSAVELIKRIASKKNLPNKKDGEQVFELINQGDEEANAIFDVYIY
                     ELTSQILNIQYLIDPEIIAIGGGISAQPVVVDRLNEAVAEIKDANPYHAAQPKIVTCH
                     FQNDANLYGALYNFFLQMDVQNKR"
     gene            complement(10867..12648)
                     /locus_tag="U0290_001542"
     CDS             complement(10867..12648)
                     /locus_tag="U0290_001542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301586.1"
                     /translation="MARNKFDIDEELETAFSAAHLKRILVYVKPYQKSIYITLFVILL
                     ANVATMIGPYLTKIVIDDTIPNKNMTQLFWIAIIFIVSVVVTGLCMRYRIRSITLIGQ
                     DILKDMRTAIFGHLQKLPFSYFDSRPHGKILIRVVNYINMLSDLLSNGLINLISDILS
                     VIVTLGFMLMIDPVLTLYSLALIPVLFVIVMVIKTAQRKAYQVLSNKQSNMNAYIHES
                     IAGIKVTQSFSREEENFEIFTEVSNEYRRSWMKAVKIQFLLWPGVQNIAVMTTCLIYF
                     VGIKGYGVDVSTGTLIAFIGYVGNFWNPVINIGNFYNSLITATTYLERIFETMDVEPD
                     IKDVPNAKKMPPIVGNVDFKDVYFRYEEGVDILKGINFHVDAGESIALVGPTGAGKTT
                     IINLLSRFYNINSGEILVDGENVEEVTLRSLRSQMGVMLQDTFIFSGTIIENIRYGKL
                     DATEEEIIAAAKVVRAHDFISGLKDGYYTEVKERGSTLSAGQRQLISFARALLADPKI
                     LILDEATSSIDTQTEILLQEGLERLLEGRTSFIIAHRLSTIKNSSRIFYIDNGRIQEA
                     GSHEELMAQHGYYYNLYQSQFDMLQAL"
     gene            complement(12641..14383)
                     /locus_tag="U0290_001543"
     CDS             complement(12641..14383)
                     /locus_tag="U0290_001543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301587.1"
                     /translation="MESMKWIWQYVRKYRLLMIGVFILIFIASGISIIYPLLGGKVID
                     DVVYQNKTNLLIPLLLIMIISTIIRTICRYTYQIMCERIGQNSLFRIREDLYKKLQSL
                     DFDFFNNTRVGDIMARMTGDTDAIRHFVSWVSYNILENVFLFSFAIIIMAAIDWKLTL
                     ALVIVTPLIAILTMKMSSKAQPVFYEIRESFSRLNSMVEENISGNRVVKAFAREDFEM
                     KKFHEHNEDFKKRNLDSADVSRTYLPVLDSLAGMLVVITLIFGGYLVIKGQMTLGDLV
                     AFNGFLWMLNGPMRMSGWLINDVQRFIASSFKIQDMMATDAKIPIHAEKPAPSLQGHV
                     EFKNVSFHFEDDPNTDVLKNISLKASPGQTIAILGETGAGKSTLVNLICRFYDPTSGE
                     ILIDGVDARKWHVRELRNHIATVMQDIFLFSDTIEGNIAFGAPDATMEDVRRMARIAD
                     ADHFIETMPESYDTIVGERGVGLSGGQKQRISLARALLKNPSILILDDTTSAVDMETE
                     VKIQGELKKITENTTTFIIAHRISSVKEADEILILNHGEIIERGTHSSLLAEKGYYFD
                     IYNKQLGTEANVNG"
     gene            14526..15359
                     /locus_tag="U0290_001544"
     CDS             14526..15359
                     /locus_tag="U0290_001544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM2301588.1"
                     /translation="MLKINTTTFNPQILYIANCYTNEVRVGENHHHDFLEISIICEGN
                     VIYDIEGERVKLGKGDMLIFNPGVNHYDITEPGMTNAQLHIGFRNFALEGYTRNTFPF
                     KKAFLRKKEEESAILSISKQIIEEKDAEKPGYDLILKAFVMQLIIHVLREATPEQLEN
                     NGVKLSTDEQQKQILVNEIIHYMEKHHTEDVSLSTLSQTMYISPAYISKVFKEETGES
                     PINYLIKIRLTRAEELLKNKDVTVKQAANMVGYNDAYYFSKLFKKYYGFPPSENWRKS
                     S"
     gene            15394..16509
                     /locus_tag="U0290_001545"
     CDS             15394..16509
                     /locus_tag="U0290_001545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2301589.1"
                     /translation="MEYKKALAFIKSNSILEQEEGTEVIFKQAQETVRGNLDPFLLKD
                     LKQHLGGTNDAIKEAPQEIQMPDFSNLEIATAAALQMRATMGSPNIDLSNGVTTEYRV
                     VEGDYGDIPVRIYRHEEATKPVPAFIFYHGGGFVGGTPAVVENFCKGIAEKLPAVVIN
                     VDYHLAPEFPAPAAPKDCYRALEWVVEQSDELGIDASKIGVSGDSAGGTLAAAVSYMD
                     YEAETNYVGFQALLYPALTLVDEDNDKYQWDISKFGASEETLPLVAPGIIGMNSSGEL
                     LRTAYVRDENPASPIYSPLSAVDKSIYPPTLIASAEFDALRAFADIFAKELRASGVQT
                     KVIVYQGMCHAFIDKYGIFPQAEDVADEIVQMMKEIF"
     gene            16616..17323
                     /locus_tag="U0290_001546"
     CDS             16616..17323
                     /locus_tag="U0290_001546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEM2301590.1"
                     /translation="MGLMKFQLFIQPKLDVLQGNIVEYEILLRDDSAVPRFPLSELEA
                     VLADEELYLAFSEWFSEAFLDVLKKYPNDRFAINIAPQQLFYIETLHWLDKLKSESHR
                     ITVEMTEDIFDVPGHKRHLNANDKNAFILNKIKVIHGLGYHIAIDDVSCGLNSLERVM
                     SYLPYIIEIKFSLIHFKNIPLEDLLLFIKAWANFAQKNKLDFVVEGIETKETMTLLES
                     HGVSIFQGYLVNKPFPV"
     gene            complement(17293..17988)
                     /locus_tag="U0290_001547"
     CDS             complement(17293..17988)
                     /locus_tag="U0290_001547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2301591.1"
                     /translation="MFHTIDFSDIFSSDYSNKISFKKGEIIHSYRDYEEKTPQIGAIL
                     EGTAVLEGPTNEGRWMINALIGQHSLFGMESLLETKTAPELTEYRVRALENGTVLFID
                     REFLLNYLYANPQFFHLILDEVIVRYLFTSKNYKNINQAPIVKVTRILVEIIELLHLH
                     QTEGAIELPVYVTQTFLADYCRSSRARVTEVLEELRESGLLLSKKPITISSHENLLNQ
                     IDSFQTGNGLLTR"
BASE COUNT         5722 a         3192 c         3792 g         5307 t
ORIGIN      
        1 aatactataa attggcacag aacttgcaat aaatatagcg ggtagcaaaa taaatgaatt
       61 atattaggag ggaaaaagat ggtaggaatt atcctcgcaa ctcacggtga atttgctgaa
      121 ggtattttgc agtccggaac aatgattttc ggcgagcaag aaaacgttaa agcaatcact
      181 ttgatgccaa gcgaaggtcc agaagacatc aaagctaaaa tggaagctgc aattgcatcc
      241 tttgatagcc aagatgaagt tttattctta gtggatcttt ggggaggcac accattcaat
      301 caagcaaacg gtctttatga actacataaa gataagtggg caatcgtagc aggacttaat
      361 ttgccaatgc tgattgaagc tttctcatca cgttttacaa tggaaagcgc acacgaaatc
      421 gcagcaaata ttcttgcacc agctcaagaa ggtgtccgcg ttaaaccaga agaactacag
      481 ccgcaagtaa cagctactga acagccacaa gcagaaatcg ctgcagttgg tgatggcaaa
      541 atcgaattcg ttttaactcg tgttgattca cgtctcttgc atggtcaagt agccactgca
      601 tggacaaaag caacacaccc aacaagaatt atcgtcgttt cagatgcagt tgcaaaagac
      661 gaccttcgta aaaaattaat cgaacaagca gcaccaccag gagtaaaagc taacgttatc
      721 ccagtccaaa aaatgattga gatttcaaaa gatccgcgtt tcggcaatac aaaagcactt
      781 ttattattcg aaaatcctca agatgtttta cgcgcaattg aaggtggcgt agaaatcgaa
      841 caagtaaacg ttggttccat ggctcactct gtaggtaaag ttgttgttag caaagtactt
      901 tccatgggga aagatgatgt tgaaaccttt gagaaactaa aagaaaaagg cgttaaattc
      961 gatgtgcgta aagtccctaa tgactcaagc gcaaacatgg aagacatcat caaaaaagca
     1021 aaacacgaac taaagacaca ataaaaaatt aaaataggag gtttattatg tctgtcatat
     1081 caataatttt agtagtactt attgcatttt tagcaggtat tgaaggaatt ctagatgaat
     1141 ttcagttcca tcagccatta atcgcatgta cattaattgg tctcgtaaca ggtaacttaa
     1201 cagcatgtat catccttggc ggaactctac aaatgatcgc acttggatgg gcaaacatcg
     1261 gagcagccgt agcaccagat gccgcgcttg cctcagtagc ttcagcaatt atattagtat
     1321 taggtggaca aggggtagca ggtattccat ctgcaatcgc gattgcaatt ccactagcag
     1381 tagcaggtct tttcttaaca atgatcgttc gtacattggc agttccaatt gttcacttga
     1441 tggacagagc cgctgaaaaa gggaatatac gcagcgtaga gtggttacat atttcagcaa
     1501 tttgtatgca aggtattcgt atcgcgattc ctgcagcagc acttttattc attccagcag
     1561 acagcgttca atctttctta gaagcaatgc cagcttggtt aacagatggt atggctatcg
     1621 gtggaggaat ggtagttgcc gttggttatg cactagttat caacatgatg gctactaaag
     1681 aagtatggcc gttcttcgta atcggtttcg tagtagctgc aatttctcaa cttacactta
     1741 tcgcaattgg tgctctaggt gttgcacttg ctcttattta ccttaaccta tctaaaatgg
     1801 gtggcggtaa ctcaaacggc ggtggaggcg gaaactctcg cgatccactg ggcgatatat
     1861 taaacgacta ttaataaaaa aaggaggaga atagaatggc agaaaaaatc gaattatcaa
     1921 agagagaccg tctacgcgta gcatggcgct ctacgttcat tcaaggttca tggaactacg
     1981 aacgtatgca aaatggtggc tgggcattct ctatgattcc cgctattaaa aaattatata
     2041 aaactaaaga agatcgttcg caagctctaa aacgtcactt agaattcttt aatacacatc
     2101 catatattgc atctccaatt ctaggggtaa cacttgctct tgaagaagaa cgtgccaatg
     2161 gagcagaagt tgatgatgta gcaattcaag gggttaaagt tggtatgatg ggacctctag
     2221 ctggtgttgg tgatccagta ttctggttta caattcgtcc aatgttagga gcattaggtg
     2281 cttctcttgc cttgagtgga aacattcttg gaccaatctt attcttcgtt gcttggaacg
     2341 taatccgttg gggcttcatg tggtatacac aagaattcgg ctacaaagct ggttctaaaa
     2401 ttactgatga cctttctggt ggattactac aagacattac aaaaggtgct tcgatactcg
     2461 ggatgttcgt cctcgccgcc ttggtgcaga gatgggtaaa tatccagttt gcgccaatta
     2521 tctcgaaagt taaacttgat gaaggtgcgt atattgattg gagtcatctt ccacaaggcg
     2581 ctcaaggtat caaaactgct ttagaacaac aacaagcagg tttagctctt tctgaaatta
     2641 aagtaacaac cttgcaaaat aacttggata acttaatccc aggacttgca gcagtagctc
     2701 ttacattcct atgtatgtgg ttacttaaga aaaaaatcag cccaattatc atcattctag
     2761 gtctattcgt agttggtata gttggtcact taatcgggct tctgtaaaaa taagctgatc
     2821 gaaaagaggc tggtgcaata ttcaccgagc ctcttttcgt ttagatatat gacacagata
     2881 aacgaatacg gtataataaa caaaacaagc gaaaagaaat ggagcgaata cagttggttc
     2941 aatcgattaa tacaaaggta gacttaacaa tagatgccac cgcgtatact ggacttacag
     3001 attacgggaa aattatgatt ggcgacaaag gttttgaatt ttttaactca cgtgatgtgc
     3061 gtaaattcgt ccaaatccct tgggaagaag tagatcaagt tatcgtatcc gttatgctaa
     3121 aaggtaagtg gatccctcgc tacgccatta aaacaaagcg caacggcaca tacacatttg
     3181 cttctaaacg acctaaagaa gttttacgta aaatacgagt ttatgtcgac ccagccaata
     3241 tggtgagctc gctcagtttc tttgatgtta tgaagcgctc gtttcggtcg atatttagca
     3301 agaaaaaaaa caaaaataaa taagccgatt tataccgaaa agcttcaatg gatttatgtc
     3361 tgttgatgct ttttttcgta cataataatt gaacaaacca cgtactttgt tataatctaa
     3421 agtaaacaaa ggaggaacac caatatgaaa aaaccaagaa tctacacgat gtcattcgct
     3481 agtgtatacc ctctttacat acaaaaagcg gagaaaaaag accgcacaaa agaagaagtg
     3541 gatgaaatta ttttttggct aaccggctat gatcaagatt ctttgcaaca agcaatcgac
     3601 caagcaattg atttcgagac cttctttgcc gaagcaccaa aaatgaatcc gaatgcttcc
     3661 ttaatcaccg gagttatttg cggctaccga gtagaagaaa ttgaagataa actaatgcaa
     3721 caaattcgtt atttggataa attggtggat gaactcgcaa aagggaaaaa aatggagaag
     3781 attttaagga aataagaaaa aagcagccgg atttggatgg ctgctttttt attgcttagc
     3841 ttctggagac tttctttttt aaatttgcta gagagttcgc tacttttaaa gtagttttta
     3901 cagattttcg gtttaatgtt ccttgataat gtctgatttt attagttagt tcgtgatttt
     3961 tattaatcgt caactgtaat ttttgtttag tatctgtcag ttgtttttct aattgctgat
     4021 ttttttcttg tgtttcagta attttttgtt ggtatttttt gttttgttca gaagttgttt
     4081 ttttcagttg ggtaagttga ttatttacga gattgacgcg gtatcttgtg ctaaaatcat
     4141 gtctttcttt taataaattg gtggagattt ttactcggtt tagcatttct tgagggttta
     4201 atatggaaat ggggtctgga cttgttggga aagtaatgga gtttataagt tcatccatgg
     4261 gagctgattt tctgttttta tcgtatttat agatatgatt gagaccatta gtatctaaga
     4321 aatcaatata attatcaaaa tttcttgctt ggactttttc ggctgatttc aggtccactt
     4381 tagttagtaa ttcttggagg ttgttggttt tttctaattc atcgatggtt acgtgaggaa
     4441 gcgcatggta ggaagctagt tcacgcattc tggcatcttg tacgaaagaa atattaggtg
     4501 ttccgactat tgttggaatg acgtttccat gtaggcgaga gccaatgcta aaatcaactt
     4561 tcttcacaaa atcgaaccaa ctaggcatgc tagtgaaata ttttactcga ccttcttgat
     4621 aatacttatg ttggatattt gttgggtagc cattgatatc actagagata tctggaccgc
     4681 cggcatacat taaatggaat tcgtctaggt gttgagggat aaagtgatag tctttatatg
     4741 tagtaatcat gttgttaagg aaattgatag ctatttctga agaagttggg gatgcattaa
     4801 tagcgatggt ggattgatct gttaagtgaa aatctcttat ttttatttct cgtccgaatg
     4861 tataaaggga cggacaacca attactcgga agtcaagttc tgcgttaaat cctagttttt
     4921 ttaaataatc tgcagtaatt tgtcctcgaa ccccaatttg agctgatttt tctaggactg
     4981 ctttaacaaa gttagtaaca tcttcatcaa aagaaaaacc ttcgtctagt tgtggttcgt
     5041 aattcgctct taacccgacg cctgttacga tgactgggat ttttaatttg cgaatgagtt
     5101 gggtgtaatt gcggagtact ggcctaaagt cgtctcgaaa tgcgtcagct aaaggcataa
     5161 catagaggtc gtaattttca ttgatttttt ctgcgagatt ggggttagat gaaagaccgt
     5221 cagcatgtat ttctacatca tcattccaca aagctcgata aatgctatat tgatacgcaa
     5281 gattaccatt gttaaacccg gttcgatcct ttaaatagat gtcttccggc gtgtagacat
     5341 tggtcggtcg catacccgat ctaatgagta ttcgcttcac taaaaaacca catccttaag
     5401 taagttaata tttaaagtat atcaaaatat taacctggtt aacaatttta aagatgaaat
     5461 tcatggttta tttgtgatta tgtttacatg catcaaagaa gtagccgatt tcttccacta
     5521 atgcttcatt caccgaataa atatgcgtgg ttccttcctt tcttaaatta ataagttttg
     5581 cttctttaag cagtttaatg tggtgagaca tggtagattt ggagatattg taagttgtgc
     5641 cagagaagcg tttttctttg cttttcagta aacataggaa aatatcaaga cggattggat
     5701 cgcttaatgc ttggaaaatt aataataaat ctgattttga gagctcattt aactttttca
     5761 tataaatatc atatcataac ttacatttta attgcgcgga acttgctgct atgttatatt
     5821 atgatagttc gaaattaatc gaactatcaa atctgaaaga agttgttggg aaatgttgca
     5881 tattgaagcg caaattacgg tcaaaaaaga acaaaccgaa gcttttttgc aggcggctaa
     5941 ggaagttatt gctgcatcaa gagcagaagc tgggaatcat ggttatgaat tagtacaatc
     6001 aacagaaaac gaaacagttt tttatatgtt agaaaaatgg gcggatatgg aagccattca
     6061 acaacacaac gacagcgagc atttcaaaaa attccagaaa ttggctgctg attttgttgc
     6121 taaagaactt gaaatttcag tattaacgcc acttgcgcga taaggaggac cataatatga
     6181 cttatgtaaa taatgatttt gaagacttaa tgaaaaaccg ccgctcgatt cgagaatacg
     6241 atgaaacggt gaaaattagc caagaagaaa tgaaagctat tctagaggac gcggtaacgg
     6301 ctccttcctc tgtaaacatg caaccatggc gttttgtggt cgtggaaagt gatgcgggta
     6361 aagaaaaatt aagctcgtta gttcgcttta atacacgtca aaatgaatct tcttccgcaa
     6421 tgatcctagt ttttggcgac ttagagaatt ttgaaaacgg tgaaaaaatt tacggagaat
     6481 cagttgaacg cggcttgatg ccggcagaag tgaaagaaca acaaatggct aaattaagcc
     6541 agtactttgc atccattccg cgcacagaag cagaacgtgt agttcttatt gacggcggaa
     6601 ttgtagcgat gcaattaatg ttagttgctc gtgcgcatgg ttatgataca aatccaattg
     6661 gtggttttga acgtaaggaa gttgctgagg ccttcaatat ggatccagag cgttatgtac
     6721 cggttatgat tgtttctatc ggtaaagcta aaaattctgg ctaccagtct tatcgattac
     6781 caattacgga tgttacgact tttgcttaaa agagggcaag gaaatagctg atatttcctt
     6841 gttctttttt tgttcctttc ttgatataat taaaataaca tacagccaag gaggagaagc
     6901 aactatgact atcaaaataa ctcgtaaaac tggaattggc agcggtatta ctccggtgaa
     6961 aattagaatc gaaaatgaag aaattgtaaa actcgacaat catcagtctc atttttttat
     7021 gcctaagatg gagaaaacaa aggtttgcgt gactaattgg ttttatggga gtcaggaagc
     7081 ggttttggaa aataataatg atgttattgt gcggattaac cgtaaagcac taatattaaa
     7141 ttattcaatg tttccatttc tttttttcgg acttttggcc actagttggg agtctacagt
     7201 cattgcgtta atactttgtt tggcatcctt tttttattcg cgaaagcatt ggtttgaatt
     7261 tgtgaaaatt aaataataat tcatggatag cgtgggatat gttctcatgc tttttttatc
     7321 tgtgtaagtt tttattccat ctgtgtatct taggaagggg tcttaaaccg cagaatgaca
     7381 gcgctttctt ttggcatgat aattgcatga tatacagatg ctcggaatga atctttaatt
     7441 ggagggagga aattagagag aagaacattc gggcaaccac acaaaaaggg gtacagagag
     7501 acaaacttag aactaccgaa atgaggttta taaatcaaaa atcggggtga agagatgaat
     7561 aagaagatga aaaagctttt tagtattact tctgttgtgt tgttagtttt atcgttagtg
     7621 gttgtatcaa ttggtgcaga gccaaaacgg gcgaaagcgg ctgaaaatgt accacagtat
     7681 cggaatgtta tgtattacgg tgattggtcg atttggggag gagaagggaa cttttatccg
     7741 aaagatattc cagctgatca attaacacat ttgaattttg cttttctgga ttttaatagt
     7801 aatggggatt tagtttttac tgataaagat gctgctgttg gggcgcctgt tggacaagag
     7861 ggagttcaat ggggcggagc aaatgcaggc gttttgaatg cgattcaaga tttgcgcgct
     7921 caaaatccga atttgaaaat aggggtttca gttggaggct ggtctaagtc gggagatttc
     7981 tcgacagttg cagcggatcc aacaaaacgg gctaactttg tgaaaaacgt gatgaagttt
     8041 gtgaaatata ctaatatgga ttttgttgat ttggactggg aatatcctgc ttcggtacgg
     8101 gacgctgacc ttgttgataa taaaaacgat gaaggcacac caaatgcaaa acctgcggat
     8161 aagcaaaact ttattacact tttacaagat ttaagaacgg ctttggataa acaaggcgtg
     8221 gatattaaca agaaatacga attatcggtt gctttaccag ctgcaaaatc tactttagaa
     8281 aatgggattg atgtagcgaa tttatttaaa gtagtcgatt ttgcgaatgt gatgacgtat
     8341 gacttaaatg gtgcttggac accgaatagt gcgcatcata cagcgcttta cggcaatccg
     8401 aaagatccga attatgatag tggtttttct gtcgaccaaa ccgttaaata cttaaaagaa
     8461 aagggagcag tttcgaataa aattgttgtt ggggcagcat tttacactcg aggctggaat
     8521 aaagtagctg ctggaacgga tacggcattg ccagggcttt tccaagctgc tgaaaaaacg
     8581 aataaagatg cggatggctc gcttacttac ggggcaaaca acgaaaaccc aattaaaaca
     8641 ggcgatgggg gccgtgctgg cggagtttgg gcgtatagaa gtattgatgc gctaaaagct
     8701 aaaacgccaa cattgaaaga atattgggat gatactgcca aggcgccgta tctttatagt
     8761 aaggaaactg gggagtttta cacatatgac aatacgcgtt caattggcta taaggcacag
     8821 tatgtaaaag ataataatct tggtgggatg atttcttgga tgcagtcgca ggataaaaca
     8881 acgacttcaa ctaagcgcga tgaactcaca aaggcgatta aatcaggatt attcggcaca
     8941 aacgctatcc cgcaaaacgc gattacttat gcgaatttaa atgtggtagc gacagtgaaa
     9001 ccttatagcg aaaatggggt cgggtacgaa attacaatta caaacaatga aaaagcggac
     9061 gaaaccaatg aagttttgaa atcaactgag ctatcgtttg aaacagtgaa attacctaag
     9121 ttttatattc cagtaaaagc gggcgaaacg ttaactgctg gcgattataa agcgggtaca
     9181 gttactactt caggtggcaa tacagtagtt gatttagctt ctgtatacga cgcgcaacaa
     9241 attccgcaag gcgcatctta tacgttccgt ttaaaatcga gtgcatctag tgtggatgta
     9301 gctaacattt ctaaaattga tttaacacaa cggatggtaa aatcgagtgt cgaatttggt
     9361 aaacaaacga tttttggcgg gggaactgtt gtacctgatc caagcgatac agaagctcca
     9421 acagtaccaa aagcactcac atcttctaat gtaaccgata aatctgctac tctaacgtgg
     9481 acagcttcaa cggacaataa agcagtggct ggatataaag tgtaccgaaa tgggaccgaa
     9541 gtgggctctg tttcaggaac tacttttaca gatagtggct taactgcaaa aacagcgtat
     9601 tcttatacag taaaagcata tgatgcggct gggaatttct cagcagcaag ctcggcctta
     9661 actgtgacaa cgcttgatgc ggcaacacca ccagcaactc cagcatggga cgctgccaaa
     9721 acgtacaata agggagatag ggtttcttac aaagggaaaa catatgaagc acagtggtgg
     9781 actcagggaa atgagccagg agctgaacag tggggtcctt ggttgttaat aaattaatag
     9841 acaaaaacag agattctttt cggagaatct ctgtttttat ttgaaaaagt gaccaaacgt
     9901 attacaatga ataaaagcga caagagaggg tgcagaagga tgtattttgt atacgatatt
     9961 ggtggaactt ttgttaaatt tgcgttgatg gaaaataacg gtacggtgaa aatgaaagat
    10021 aaattcccta caactgccaa aagtgcagaa gaacttgtag ctcaaatggt cgaaaagtgg
    10081 cgcccctata gtacagaagt gaagggcata gctgtgagtt gtccgggagt ggtagatacg
    10141 gaaaaaggcg tgatttacca aggtggctcg ctattattta tgcatgagaa aaatttggct
    10201 gaaatgctag cgcgtgaatg tcatgttccc gttgtcttgc aaaatgatgc gaagagtgcg
    10261 gctttagcgg aactttggtt aggtgtggca aaaaatgtac atagcgcggc gattttaacg
    10321 cttggaagtg gcgttggtgg cggaattatt atggatggta aattacaatc tggctatcat
    10381 ttgatggcgg gagaagttag ttttatggag acttcttttg atacgaagaa attgcgaggt
    10441 acattctttg gaagaactgg atcagcggtg gagttaatta agcgcattgc atcaaagaag
    10501 aatttaccca ataaaaaaga tggtgagcag gttttcgaat taattaacca aggcgatgaa
    10561 gaagcgaatg ctatttttga tgtgtatatt tatgaattaa catctcaaat tttaaatatc
    10621 cagtatttga ttgatccgga aattattgca attggtggtg gcattagcgc tcaaccagtt
    10681 gttgttgata gactaaacga agctgtcgca gaaataaaag atgctaatcc ttatcatgcc
    10741 gcacaaccga aaatcgtcac ttgtcatttc caaaatgatg cgaatttgta cggagcattg
    10801 tataatttct ttttacaaat ggatgtgcaa aataaaaggt aactagaatc tctagttacc
    10861 ttttttctat aaagcttgca acatatcaaa ctgtgattga tataaattat agtagtagcc
    10921 gtgctgtgcc atcagttctt cgtgactgcc agcttcttga atgcgaccat tatcaatgta
    10981 gaagatgcgc gaactgtttt tgattgtcga aagtctgtgc gcgataatga aggatgttcg
    11041 gccttccagc agtcgctcaa gcccttcttg gagtaggatt tctgtttgtg tatcaatact
    11101 tgaagttgct tcatcaagga tgaggatttt cggatcggct aaaagagcac gggcaaagga
    11161 aatcagttgt cgctgaccgg ccgaaagagt gctacctcgt tcttttactt cggtatagta
    11221 gccatctttt aatccggaaa tgaaatcatg agcacgaacg actttggcag ccgcgataat
    11281 ttcttcttcg gttgcatcta gcttcccgta gcgaatattt tcaataatcg ttcctgaaaa
    11341 aataaaggta tcttggagca tcacgcccat ttgggacctg agtgatctaa gcgtgacttc
    11401 ttcgacattt tccccatcaa ctaaaatttc tccagaattt atattataaa aacggctgag
    11461 caagtttatg atggtcgttt ttccagcgcc agtcggacca acgagcgcaa ttgattcacc
    11521 cgcatccaca tgaaaattaa ttccttttaa aatgtccaca ccttcctcat aacggaaata
    11581 aacatcttta aagtcaacat ttccaacgat tggtggcatt tttttcgcat ttgggacatc
    11641 tttaatatcg ggctcaacgt ccatcgtttc gaaaattcgc tccaaataag tcgttgcggt
    11701 aataagcgaa ttatagaagt ttccaatatt aataacagga ttccaaaaat tcccaacata
    11761 accgatgaaa gcaatcagtg tcccggtaga aacgtccaca ccgtaacctt tgattccaac
    11821 gaagtaaatt aaacaagtcg tcattacggc gatattttga accccaggcc aaagcaagaa
    11881 ttgaattttc accgctttca tccaagaacg gcggtactca ttacttacct cggtgaaaat
    11941 ctcaaaattc tcttcttctc gcgaaaagct ttgcgttact tttatcccag cgatgctctc
    12001 atggatatag gcgttcatgt tggattgttt attgcttaga acttgataag cttttcgttg
    12061 cgcggtttta atgaccataa caatcacgaa aagaaccggg ataagcgcta aactatacaa
    12121 cgttaacact ggatcaatca tcaacataaa accaagcgtt acaatgacac ttaaaatatc
    12181 ggaaatcaga tttatcagcc cattggacaa taaatcactg agcatattga tgtaattaac
    12241 aacacgaatc aaaattttac catgcgggcg actgtcaaaa taagagaaag gcagcttttg
    12301 caaatgaccg aaaatcgctg tccgcatatc ttttaaaatg tcttgcccaa taagcgtaat
    12361 cgacctaatg cggtatcgca tacaaagtcc ggttacaacg acagaaacta tgaaaataat
    12421 cgcaatccag aatagttgtg tcatgttttt gtttggaatc gtatcatcta tgactatttt
    12481 ggttaaatac gggccaatca ttgttgctac atttgctaat aagatgacaa agagcgtaat
    12541 ataaatggat ttttgatagg gttttacgta aacgagaata cgttttaaat gtgcggcgct
    12601 gaaggctgtt tccagttctt cgtcaatatc aaatttattt ctagccattc acattcgcct
    12661 ccgttccaag ttgtttattg taaatatcaa aataataacc tttttctgct agcaaactag
    12721 agtgtgtgcc gcgttcgatg atttcgccat gatttaaaat taaaatttca tcggcttctt
    12781 ttacagaaga aatccggtgc gcaatgataa atgtggtcgt attttccgtg attttcttta
    12841 attcaccttg gattttcact tcggtttcca tatcgacagc ggaagtggta tcatccaaaa
    12901 tcaaaatgga tggatttttt aaaagagcac gagctaaaga tatccgctgc ttttgtccgc
    12961 cagaaagtcc gacaccgcgt tcaccaacaa tcgtgtcata actttcaggc atggtttcga
    13021 tgaagtggtc cgcgtctgca attcgcgcca tacgccggac atcttccatt gttgcatccg
    13081 gagcgccaaa tgcaatattt ccttcaatcg tatcagaaaa taggaaaata tcttgcatca
    13141 ccgtggcgat atggtttcta agttcccgca catgccattt tcgcgcatcg acaccatcaa
    13201 ttaaaatttc accggaagtc ggatcgtaaa atcggcaaat taagttgacg agtgttgatt
    13261 ttccagcgcc agtttcaccc agaatagcaa tcgtttggcc tggagaagct tttagtgaaa
    13321 tatttttgag tacgtccgtg tttgggtcgt cctcgaaatg aaaactgaca tttttaaact
    13381 cgacgtgacc ttgaagtgat ggcgcaggtt tttcagcgtg gatggggatt ttagcgtcag
    13441 ttgccatcat gtcttgaatt ttaaacgaag aagcgataaa gcgttgaacg tcgttaatca
    13501 gccagccact catgcgcatc gggccgttta gcatccatag gaatccattg aaggcaacta
    13561 aatctcccag cgtcatttgg cctttaatta ctaaatagcc accgaaaata agcgtgatga
    13621 caacgagcat gcccgcgagc gaatcaagca ctggcaaata ggttctggaa acatcggcag
    13681 aatctagatt acgttttttg aaatcctcat tgtgttcatg gaatttcttc atttcaaaat
    13741 cttctcgcgc aaaggctttt acgacgcgat tcccgctaat attctcttcc accatcgaat
    13801 tgagccgtga aaagctctcc cgaatttcat aaaaaactgg ttgggcttta ctcgacattt
    13861 tcatcgttaa aatagcaata agcggtgtta cgataacaag cgcaagcgtt aatttccagt
    13921 caatcgcggc cattatgata attgcaaaac taaataaaaa tacattttcc aaaatgttgt
    13981 aagataccca cgaaacaaaa tgacgaatcg catccgtatc accagtcatc cgcgccataa
    14041 tatccccaac gcgcgtatta ttgaaaaaat caaaatcgag tgattgcaac tttttatata
    14101 aatcttctcg aattcggaaa agggaatttt gcccaattcg ttcgcacata atctgatagg
    14161 tataacggca aatagttcga ataattgtcg aaataatcat gattaaaagt agcgggataa
    14221 gcaaattcgt tttattttga tagacaacat cgtcaatcac tttcccgcca agtaacggat
    14281 aaataatact aatacctgaa gcgataaaaa ttaaaataaa tacaccaatc ataagtagac
    14341 gatattttcg gacatattgc caaatccatt tcatactctc cattttttca catcctttaa
    14401 tattcatata tccatttagt ttacactcct aatttcgaaa aagaatggtt tatattcgct
    14461 gtaagcatgg acaatgttat ataattaaaa gataaatgta agcgttataa cgaggaggtg
    14521 aagtgatgct gaaaataaat acgaccacat ttaatccgca aattttgtat atcgcgaatt
    14581 gttatacgaa tgaggtgcgc gtaggtgaaa atcaccatca tgattttttg gagatctcga
    14641 ttatttgtga gggaaacgtt atttatgata ttgaaggcga gcgagtcaag ctaggaaaag
    14701 gcgatatgct gatttttaat cctggtgtga atcattacga tataaccgaa ccaggtatga
    14761 cgaatgcgca actccatata ggttttcgga actttgcact ggaaggatac acgcgaaata
    14821 cgttcccgtt taaaaaggcc tttttacgaa aaaaagaaga agaatctgcc attttatcta
    14881 tttctaaaca aattatagaa gaaaaagacg cagaaaaacc aggatatgac ttgattttaa
    14941 aggctttcgt catgcaatta attatccatg ttttacgcga agccacccca gaacaacttg
    15001 aaaataacgg cgtcaaatta tctaccgacg agcagcaaaa acagatactt gtaaacgaaa
    15061 ttattcatta tatggaaaaa caccatacag aagacgtctc gctctcaacg ctttcgcaaa
    15121 cgatgtacat tagccccgcc tatatctcca aagtatttaa agaagaaacc ggggaatcac
    15181 caattaacta cttaatcaaa attcgtctta ctcgtgcaga agaattactc aagaataaag
    15241 acgttaccgt aaaacaggcc gcaaatatgg tcggatataa tgatgcttat tattttagca
    15301 agcttttcaa gaaatattac gggtttccac catcagaaaa ctggcgcaaa tcgagttaga
    15361 attccaaaat aagacagaga gaaggaagac tggatggaat ataaaaaagc tttagcgttt
    15421 ataaaatcaa atagcattct agaacaagaa gaaggaacag aagttatttt taaacaggca
    15481 caagaaacag ttcgagggaa tttggatcct tttttattaa aagacctgaa acaacatctt
    15541 ggcggtacga atgatgcgat aaaagaagcg ccgcaagaaa tccaaatgcc agatttttct
    15601 aatttggaaa tagcaacggc agctgcacta caaatgcgag caacgatggg aagtccgaat
    15661 attgatttat caaacggtgt aactacggaa tatcgggttg ttgaagggga ctatggcgat
    15721 attccggtac gaatttatcg tcacgaagaa gcgaccaaac cagttcccgc attcattttt
    15781 tatcatggtg gtggctttgt tggtggaacg ccggctgttg tggagaactt ttgtaaaggt
    15841 attgcggaaa agttaccggc agttgttatt aatgtggact atcatttagc tcccgaattc
    15901 ccggcaccag cagctccaaa agattgttac agggcgcttg aatgggtagt ggaacaaagc
    15961 gacgaactcg gtatcgacgc ttcgaaaata ggtgtttctg gagatagcgc gggtggaact
    16021 ttagcagcag cggtgagcta tatggattat gaagcagaga cgaattatgt aggatttcaa
    16081 gctttacttt acccagcgct aacgttagta gatgaagata atgataagta ccagtgggat
    16141 atttccaagt ttggggcatc agaagagaca cttccgctcg ttgcgccagg tatcattgga
    16201 atgaacagct ctggcgaatt actgcggacg gcctatgtta gagacgaaaa tcccgcatcg
    16261 ccaatttatt ctccactatc ggctgtagat aaaagtattt atccgcctac acttatagcc
    16321 agtgcggagt ttgatgcgtt acgagctttt gcagatattt ttgctaaaga actgcgagca
    16381 agtggtgtgc aaacaaaagt aatcgtttac caaggaatgt gtcatgcttt cattgataaa
    16441 tacgggattt tccctcaagc ggaagacgtg gcagatgaaa ttgttcaaat gatgaaagaa
    16501 atattttaaa gaataatttg caggcatttt ccggaatgcc tgtttgtttt tggactaaat
    16561 tttgcgatta gtactaaaaa tgtattagaa tagagaagag aaatgagaaa ggatgatggg
    16621 actcatgaaa tttcagcttt ttattcaacc aaaattagat gttcttcagg gaaatattgt
    16681 cgaatatgaa atacttttac gtgatgatag tgcagttcct agatttcctc tatcagaatt
    16741 agaagctgta ctcgcggacg aagaactgta cttagctttt tccgagtggt ttagcgaggc
    16801 cttcttagac gttttaaaga aatatccaaa tgatcgattt gccataaata ttgcgccaca
    16861 acagcttttt tacatagaaa cactccactg gctagacaaa ttaaaaagcg agagccatcg
    16921 tataactgta gaaatgaccg aagatatttt cgatgtcccc ggtcataaac gccaccttaa
    16981 tgcgaacgat aaaaacgcat ttattctaaa taaaattaaa gtgattcacg gtctcggcta
    17041 ccatatcgcc atagacgatg ttagttgcgg attgaacagc ctagagcgag tgatgagcta
    17101 cctaccttac ataatagaga ttaaattctc cctcattcat ttcaaaaata taccattaga
    17161 agatttgcta ctatttatta aagcttgggc aaattttgct cagaaaaata agctcgattt
    17221 tgttgttgag ggaattgaaa cgaaagaaac catgactcta ctagaaagtc atggcgtctc
    17281 gatttttcaa ggttatctcg ttaataagcc gtttccggtt tgaaaactat ctatttgatt
    17341 gagtagattc tcgtgcgagc taatggtgat gggctttttg gaaagcagta gtccgctttc
    17401 ccgtagctct tctaacactt cagttactct agctcgactc gaacgacaat aatcagctaa
    17461 gaaagtttgc gtgacataga ctggaagctc aattgccccc tctgtttgat gcaaatgaag
    17521 taactcaata atttccacca aaatacgcgt tactttgact atgggtgctt gattaatatt
    17581 cttgtaattt tttgatgtaa ataaatatct gacaataact tcatcaagta taagatggaa
    17641 aaattgtggg tttgcatata aataattgag aagaaactcg cggtcaataa atagaacggt
    17701 accattttct aatgcgcgaa cacgatattc agtaagttca ggtgctgttt tagtttcgag
    17761 taaactttcc attccaaaaa gcgagtgttg accaatcaac gcatttatca tccagcgacc
    17821 ttcatttgta ggaccttcta aaacagccgt tccctctaaa atagcaccta tttgcggcgt
    17881 cttttcttcg taatctctat atgaatgaat aatttcgcct tttttaaaag aaatcttatt
    17941 tgaataatca ctagaaaaaa tatctgaaaa atctatcgtg tgaaacatta tcaaaactcc
    18001 tatactaagg taa
//
LOCUS       DASDYO010000055        17734 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.055, whole genome shotgun sequence.
ACCESSION   DASDYO010000055 DASDYO010000000
VERSION     DASDYO010000055.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 17734)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17734)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17734
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.055"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..266
                     /locus_tag="U0290_001548"
     CDS             <1..266
                     /locus_tag="U0290_001548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465721.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF3899 domain-containing protein"
                     /protein_id="HEM2301592.1"
                     /translation="VSLNNYVDISFMVALIALLIGLFVYIMRSGFLDRVHNGFRSISR
                     KIKREEENEFSDMPLSELVGLRYAGILFSSLLVMLSSILCMFL"
     misc_binding    311..537
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            602..1597
                     /gene="trpS"
                     /locus_tag="U0290_001549"
     CDS             602..1597
                     /gene="trpS"
                     /locus_tag="U0290_001549"
                     /EC_number="6.1.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465722.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tryptophan--tRNA ligase"
                     /protein_id="HEM2301593.1"
                     /translation="MKKVIFSGIQPSGQLTLGNYIGALKQFGQFQDEYECFYCIVDEH
                     AITVPQDRLKLREQTRSLAALYLAVGLDPEKATLFIQSEVAAHAQAAWILQCNVYIGE
                     LERMTQFKDKSDGKAGVSAGLLTYPPLMAADILLYQTDLVPVGEDQKQHIELTRDLAE
                     RFNKKHADIFTMPEVFIPKQGARVMSLQDPTKKMSKSDANLKNAIFLLDPPATIRKKI
                     KSAVTDSSGIIEYNKEEKPGVSNLLTIYSVITGETISTIEEKYVGKGYGDFKTDLAEL
                     VVAELEPIQERYYAYLKSEELDTILDAGAEKAARVANKTLKKMENGVGLGRKRRR"
     gene            complement(1653..2069)
                     /locus_tag="U0290_001550"
     CDS             complement(1653..2069)
                     /locus_tag="U0290_001550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465723.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="organic hydroperoxide resistance protein"
                     /protein_id="HEM2301594.1"
                     /translation="MKKLYETTVINTGGRSGEVHSPDNVFYFDISAPTELGGDGGGGT
                     NPEQLFAAGYGACFNSALELVLGKAGIEAKSTVTATVSLYSDPEDNGFKIGVVLEGTI
                     EGQDKEKTEALLKKAHEVCPYSKATRGNIDVEIKVG"
     gene            complement(2053..2505)
                     /locus_tag="U0290_001551"
     CDS             complement(2053..2505)
                     /locus_tag="U0290_001551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465724.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2301595.1"
                     /translation="MDTNTRILEEQLCFSVYNASKQFTKLYREALEPFQLTYPQYIAL
                     LVLWEVEEQTVSELGKRLALDSGTLTPMLKRMEHLGYVTRSRHPEDERRVYIRLTEKA
                     IKIQPDVLKSVDNCLQLLDFKELDYTQLLTKIQSLTKQLGGIENEKII"
     gene            complement(2627..3868)
                     /gene="fabF"
                     /locus_tag="U0290_001552"
     CDS             complement(2627..3868)
                     /gene="fabF"
                     /locus_tag="U0290_001552"
                     /EC_number="2.3.1.179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465725.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="beta-ketoacyl-ACP synthase II"
                     /protein_id="HEM2301596.1"
                     /translation="MDKRRVVVTGIGAVTPIGNDAETSWENAKKGVNGVAKMTRLNPD
                     DFPVKIAAELKDFDVEKYLEKKEARKMDRFTHYAIASAEMAVQDSGLVIDDSNANRVG
                     VWIGSGIGGMETFETQYEIFLNRGHRRVSPFFVPMMIPDMGSGQVSIRFGAKGINSTT
                     VTACATATNSIGDAFKVIERGDADAMITGGAEAPITKMSLAGFTANKALSLNPDPETA
                     CRPFDKDRDGFIIGEGAGIVILEEYEHAKARGAKIYAEIVGYGATGDAYHITAPAPNG
                     EGAARAMKMAIDDAGLTPDKVDYINAHGTSTPYNDEYETQAIKTVFGDHAKKLAISST
                     KSMTGHTLGASGGIEAIFALLTIRDNIIAPTIHLKNQDEVCDLDYVPNEAREANVNVV
                     ISNSFGFGGHNATLVFKRIED"
     gene            complement(4071..5009)
                     /gene="fabH"
                     /locus_tag="U0290_001553"
     CDS             complement(4071..5009)
                     /gene="fabH"
                     /locus_tag="U0290_001553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465726.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-oxoacyl-ACP synthase III FabH"
                     /protein_id="HEM2301597.1"
                     /translation="MNAGILGVGKYVPEKIVTNFDLEKIMDTSDEWIRTRTGIEERRI
                     ARDDEYTHDLAYEAAKVAIKNAGLTPDDIDLFIVATVTQEATFPSVANIIQDRLGAKN
                     AAGMDVEAACAGFTFGVVTAAQFIKTGAYKNIVVVGADKLSKITNWDDRTTAVLFGDG
                     AGAVVMGPVSDDHGLLSFDLGSDGSGGKYLNLDENKKIYMNGREVFRFAVRQMGEASL
                     RVLERAGLEKEDLDLLIPHQANIRIMEASRERLNLPEEKLMKTVHKYGNTSSSSIALA
                     LVDAVEEGRIKDNDNVLLVGFGGGLTWGALIIRWGK"
     gene            complement(5129..6256)
                     /locus_tag="U0290_001554"
     CDS             complement(5129..6256)
                     /locus_tag="U0290_001554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2301598.1"
                     /translation="MDRKCQLIMKKKFTQILLASVIVSSTLVPFVQAEAAGTSQTSVS
                     HAGMTLSQQQFIQSIANDAQDLQKEEKILTSVTLAQAILESNWGKSGLSTSANNLFGI
                     KGSYEGNSVSMGTQEFSSGKAYRTQADFRKYPDKKASLVDHAQLFVNGVSGNANLYSA
                     VIGETNYKEAAYAIQDAGYATDPAYAEKLISTIENYNLDQYDQIYDTVTSTENQLAYA
                     EIKDSSNETIWTKPYNTEGAEKIGSVKDYKNKSLRISQKAVTEKGTWYQLLNQGETIG
                     WVNSNAVEVFYTPKNETNVKLDKYITDSDQKIYAYPVEDNSKVVKNLNDYLGKELDID
                     RRADVKNEYWYRIKSDDGKVIGWSKADGFAENNPNKALEVK"
     gene            6579..6767
                     /locus_tag="U0290_001555"
     CDS             6579..6767
                     /locus_tag="U0290_001555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YjzD family protein"
                     /protein_id="HEM2301599.1"
                     /translation="MRYVVTVVWVFLLSLMAEFVLSSMLYVSFDMTRAIILTVGLSFF
                     IILITFLMPKDSEVYDFK"
     gene            complement(6857..7546)
                     /gene="gpmA"
                     /locus_tag="U0290_001556"
     CDS             complement(6857..7546)
                     /gene="gpmA"
                     /locus_tag="U0290_001556"
                     /EC_number="5.4.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-diphosphoglycerate-dependent
                     phosphoglycerate mutase"
                     /protein_id="HEM2301600.1"
                     /translation="MKLVLIRHGQSEWNKLNLFTGWHDVDLSQEGVVEAMTAGKRIKE
                     AGLEFDVAFTSVLTRAIKTLNYVLEESDQMWVPVHKSWRLNERHYGALQGLNKQETAE
                     KYGADQVQKWRRSYDTLPPLLEENDERQAKNDRRYQLLDTHAIPAGENLKVTLERVIP
                     YWMDTIAPEIKEGRRVVIAAHGNSLRALVKFLEGIGDDEIMDLEIPTGVPLVYELNDD
                     LKPVNKYYLDK"
     gene            complement(7637..10237)
                     /gene="clpB"
                     /locus_tag="U0290_001557"
     CDS             complement(7637..10237)
                     /gene="clpB"
                     /locus_tag="U0290_001557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent chaperone ClpB"
                     /protein_id="HEM2301601.1"
                     /translation="MDLQKFTQQVQQTIADAQNLAIASEHQEIDVAHVFKVLLTESDF
                     AKRVYDVAEVDIDALQKTVEDALTKIPVVSGSGVNYGQAMSQALFQLMRDAEKEQKQL
                     DDDFVSTEHLILAVMDQKSNPITMNLKKQHKSKKQIQEAILKIRGGKKVTSQNAEENY
                     EALTKYGRDLVAEVRSGKLDPVIGRDAEIRNVIRILSRKTKNNPVLIGEPGVGKTAIV
                     EGLAQRIVRKDVPEGLKDKTIISLDIGSLIAGAKYRGEFEERLKAVLQEVKQSDGQIL
                     LFIDEIHTIVGAGKTDGAMDAGNMLKPMLARGELHCIGATTLDEYRQYIEKDAALERR
                     FQKVLVPEPTVEDTVSILRGLKERFEIHHGVNIHDNALVAAASLSNRYITDRFLPDKA
                     IDLVDEACATIRVEIDSMPSELDEVTRKVMQLEIEEAALKEEKDPASERRLEILQREL
                     ADYKEEANQMKSKWESEKNEISKIREVREQIDHLRHELEEAENNYDLNKAAELRHGKI
                     PAVEKELLELEAENREKTAQEDRILQEEVTENEIAEIVGRWTGIPVTKLVEGEREKLL
                     KLADELHQKVIGQDDAVQLVSDAVLRARAGIKDPKRPIGSFIFLGPTGVGKTELAKAL
                     AFNMFDSEDHMIRIDMSEYMEKHSVSRLVGAPPGYVGYEEGGQLTEAVRRNPYSIVLL
                     DEIEKAHPDVFNILLQVLDDGRITDSQGRLIDFKNTVIIMTSNIGSNLLLERTEEGEI
                     SPELESDVMQILQSEFKPEFLNRVDDIILFKPLTLADIKGIVEKLVEELQIRLADQEI
                     TITISDNAKAFIAEEAYDPVYGARPLKRYIVRHVETPLAREIVSGKIMPHSSVEIDLA
                     DKEFTFKVTE"
     gene            complement(10385..11062)
                     /locus_tag="U0290_001558"
     CDS             complement(10385..11062)
                     /locus_tag="U0290_001558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Bax inhibitor-1/YccA family protein"
                     /protein_id="HEM2301602.1"
                     /translation="MNEINHTSERANTEKRTEKQIIMQKILNWFVFSLLLASIGAAIG
                     SKLSPELYLPLVVLEVALLITAMVVRRSKTINKVVGYPVVLAFAFVTGLTLGPTLTYY
                     FGAGQGAAVLMAFVTATVTFTTLAFIGAKMKKDLSFLSSALFAAIIILVIFSFVGVFL
                     PLGSMLSTIISAGGTIIFSLYILYDFNQIMKRDVELADVPMLALNLYLDFLNLFMFLL
                     RLFTGRD"
     gene            complement(11174..11944)
                     /locus_tag="U0290_001559"
     CDS             complement(11174..11944)
                     /locus_tag="U0290_001559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2301603.1"
                     /translation="MKPRGICFFDMDGTLLNSESKVLDTSLQALDKLRENNVIPVIAT
                     GRTLIEISHQMKITGIESAVMMNGQMAIFEGEKVYEDVIDADLLARLTEEAKSQNVEV
                     CYYNDKRIGATASTPVVKAHYDFLGEPMPEVRPNMYKEENINMALLLLETGDDYFPER
                     FPELQFVRNTPFSNDVLRKGGSKAVGISKLLEVMGYQDVPTYAFGDGMNDLEMFGAVD
                     YAIAMENAVPLLKEKATFVTKDNNSDGIMLGLKQFDLI"
     gene            complement(12008..12793)
                     /locus_tag="U0290_001560"
     CDS             complement(12008..12793)
                     /locus_tag="U0290_001560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301604.1"
                     /translation="MIRKLTVSDNEEVMALLKPEATLNLFIIGDIENFGYESDVQDLW
                     GEFDSEDKLHALLLRFDTFFLPYSKDANFDAKAFSEIIAKHDTYEVSGISRVTKELEP
                     FLPELAEKRQDTYFCECEHVNRISVNQDVIVRTAVAEDVAPIIKMRKHIKEFGSRDEN
                     EELIIRQIEKGVKRIYYIEQDQEVVAVAETSAENSFSAMITGVATSDGYRQRGFASTL
                     LKKLCCDVLAEGKKPCLFYDNPVAGEIYHRLGFEHTGDFVMYK"
     gene            complement(12914..13258)
                     /locus_tag="U0290_001561"
     CDS             complement(12914..13258)
                     /locus_tag="U0290_001561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465734.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301605.1"
                     /translation="MKNKAEKQRIATNLSLYMKINGYTHRTFALAVGISQNTLKALMI
                     GKMRNENKFQKYISQITESLALEEKFFEQPKEAITAAPITFQDTNKMHLGDEKFNAIS
                     LMLKIGEIHYES"
     gene            complement(13415..14344)
                     /gene="hemH"
                     /locus_tag="U0290_001562"
     CDS             complement(13415..14344)
                     /gene="hemH"
                     /locus_tag="U0290_001562"
                     /EC_number="4.98.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465735.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ferrochelatase"
                     /protein_id="HEM2301606.1"
                     /translation="MTKKVGLLVMAYGTPYKDEDIERYYTDIRHGHKPSEEMIADLRG
                     RYHAIGGLSPLAKITEAQAYGLEKALNESQDEVEFKAYIGLKHIEPFIEDAVEAMHKD
                     GIEEAISIVLAPHYSSFSVEAYNKRAKDAADKLGGLRIKAINDWYKQPKFIQMWADRI
                     NETAKQIPADELLDTVLIVSAHSLPEKIKQHNDPYPDQLQETADFIFEKVVVPHYALG
                     WQSEGKTGEPWLGPDVQDLTRELYGREKYKHFIYTPVGFVAEHLEVLYDNDYECKVVT
                     DEVGAIYHRPPMPNSDPEFLEVLRTVVWEKYSN"
     gene            complement(14341..15402)
                     /gene="hemE"
                     /locus_tag="U0290_001563"
     CDS             complement(14341..15402)
                     /gene="hemE"
                     /locus_tag="U0290_001563"
                     /EC_number="4.1.1.37"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465736.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uroporphyrinogen decarboxylase"
                     /protein_id="HEM2301607.1"
                     /translation="MTKITNDLFLKAARKEQVDRIPVWYMRQAGRSQPEYRKLKEKYS
                     LFEITHQPEICAYVTKLPVDQYGVDAAILYKDIMTPLPGMGVDVEIKSGIGPVIHNPI
                     RSFQDVEKLTMFKPEIEVPYVLDTIKLLADDMLDVPLIGFAGAPFTLASYMIEGGPSK
                     NYHQTKSFMYREPEVWAILMEKLGRMTANYLIAQINAGASAVQLFDSWVGALSRADYA
                     EYIRPVIEMIVREVKAVHPTTPIIMQAVGASHLLAEWETMPLDVVGVDWRETITSARK
                     KVPTKAIQGNLDPSTLLAPEKCLKEANRILQEGVLEPGYIFNLGHGVFPEVPPEMLKK
                     LTNYIHERSEILLKKDDIK"
     gene            15599..16102
                     /locus_tag="U0290_001564"
     CDS             15599..16102
                     /locus_tag="U0290_001564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM2301608.1"
                     /translation="MKKVFITTGTEHYLRQLMANYIGGNVTLLQNFSQSLLYQESTGE
                     KLFQEGAEYRVLQSSGSLKGFGVVVFEYIHLRDEEIPIFLQMYQRASLHFSETPGLQS
                     TKLTKAMNMNKFLIISFWDSEVFFHDWKKTPLSKEITNIMKKNNTQSGFSHEDIYHYP
                     EFSHDAK"
     gene            complement(16141..17364)
                     /locus_tag="U0290_001565"
     CDS             complement(16141..17364)
                     /locus_tag="U0290_001565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301609.1"
                     /translation="MKMIFDSKALWKERFSAYTTEVMRYLRYMFNDHLLFVLVIGLGA
                     GIFYYAGWVKTLEPTFPVIPLMVILLTASIAISPVATLLKKPDIVYLIVQEKAMDSYF
                     TQAKIASFFMQLYVFVIVLGVCMPMYVEVTKVPYSQFFTLFIVLSMLKVWNIYFGWES
                     MKLEEADTTWMFIRVILNAILIYIALVAAPYISIPLVLVVLVASYYWLRTKTAKVTLR
                     WEYLVDKEEARMNRFYRLVNLFTDVPHLRGTVRRRSYLDFLYQPIPYAKRKTFAYLFS
                     RTFIRTNEYAGLYIRLTVIAVILLVFVQGFYLNIIFSLLFLYLTGFQFIPMLKHYDAQ
                     IMLRLYPINDRYRHRSFIHFLRILLLAQALLFSVIGIAQNGTISGMIILGINLAFVVI
                     FTFLYAPARMKKMYE"
     gene            complement(17348..>17734)
                     /locus_tag="U0290_001566"
     CDS             complement(17348..>17734)
                     /locus_tag="U0290_001566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2301610.1"
                     /translation="RLEKKLNWFPAHFSKGMKQKVMIMSAFLIEPKLYIIDEPFVGLD
                     PLGIQSLLNWMDEMRSKGASILMSTHILATAEKYCDTFIIIHQGEIRAEGTLKDLQTN
                     FEMPGASLDEIYIQLTKEEEADEDDI"
BASE COUNT         5165 a         3515 c         2980 g         6074 t
ORIGIN      
        1 gtgttagttt aaacaactat gtggatattt cctttatggt agcacttatc gcgctcctaa
       61 ttggattgtt tgtttatatt atgagaagtg ggtttttaga ccgcgttcat aatggttttc
      121 gaagtatttc tcgcaaaatt aaacgagaag aagaaaatga gttttcagat atgcctttat
      181 ctgaattagt cggtcttcga tacgctggga ttttgtttag ttccctactt gttatgctat
      241 ctagtattct atgtatgttt ttgtaattga caagccgttt tgtaaactga tagaataaaa
      301 gtaatataac tgatgcgtta ataggaagat tagtacattt tgttgcttta taatagagag
      361 tctgtggttg gtggaaacag ataaagcgca aaatcgaatg gacttctaag gactgtttgt
      421 gaaagccagt agcgaacagc ggctaaagac cgttacttct ttatatagaa attttctatt
      481 gctaagagcc tttttaggta cttagggtgg caccgcggat aaccgttcgt ccctaacatt
      541 tatatgttgg gatggacggt tttttatttt cgctatcagt gaaaaaattg gaggaataaa
      601 catgaaaaaa gtaatatttt ccggaattca acctagtgga caattaactt taggaaatta
      661 tattggagct ttgaaacagt ttggtcagtt tcaagatgaa tatgaatgtt tttattgtat
      721 cgttgacgaa cacgctatta cggttccaca agatagatta aagcttcgtg agcaaacaag
      781 aagtttagca gctctttatt tagcagttgg actggatcct gaaaaagcga ctctttttat
      841 tcaatctgaa gttgcagcac atgctcaagc agcatggatt ttacaatgta acgtatatat
      901 tggcgaatta gaacgtatga cgcagttcaa agataaatca gatgggaaag caggtgtcag
      961 tgctggcctt ttaacttacc caccattgat ggcagctgat attttacttt atcaaaccga
     1021 tttagttcct gttggcgagg atcagaagca acatatcgaa ttaactcgcg acttagcaga
     1081 acgatttaat aaaaagcacg cagatatttt cacgatgcca gaagtattca ttcctaaaca
     1141 aggcgcacga gtaatgtcct tacaagatcc aacgaaaaaa atgagtaaat ctgatgccaa
     1201 tttgaaaaat gctatctttt tacttgaccc accagctacc attagaaaaa aaatcaaaag
     1261 cgctgtaacc gattctagtg gtattattga atataataaa gaagaaaaac caggtgtgtc
     1321 taacttacta actatctatt ctgttatcac tggcgaaaca atttctacta tagaagaaaa
     1381 atatgttgga aaaggttatg gcgattttaa aacagattta gctgaattag ttgttgctga
     1441 acttgagcca attcaagaaa ggtactatgc ttatctaaaa tctgaggagc tggacactat
     1501 attagacgca ggagcagaaa aagctgctcg cgtggctaat aaaacattga agaaaatgga
     1561 aaatggcgtg gggcttggcc gcaaacgcag aagataatat aaaaaagcca atgactagtt
     1621 gatctaagtc attggctttt tttatttaaa cattaaccta ctttaatttc cacatcgatg
     1681 ttaccacgag ttgctttaga atatggacaa acttcatgtg cttttttaag tagtgcttct
     1741 gttttttctt tatcttgtcc ttcgatagtt ccttctaata cgacaccaat tttaaaaccg
     1801 ttgtcttctg gatcactata taagctgaca gttgctgtta ctgtgctctt tgcttcaatc
     1861 ccagcttttc ctagaactaa ttctaacgcg ctattgaaac aagctccgta tccagccgca
     1921 aatagttgtt ctgggtttgt tccaccaccg ccgtctccac caagttctgt tggcgcagaa
     1981 atatcaaagt aaaatacgtt gtctggcgaa tgaacttcac cacttcttcc acctgtatta
     2041 atgactgttg tttcatataa ttttttcatt ttctattcct cctaattgtt tcgttaacga
     2101 ttgtattttg gtaagtaatt gtgtgtagtc taattctttg aaatcaagta attgaaggca
     2161 gttgtccacg ctttttaata cgtcaggttg tatttttatt gctttttctg ttaagcgaat
     2221 ataaacgcgg cgctcgtctt ccggatgacg actccgtgta acatatccta aatgctccat
     2281 tcgttttaac ataggtgtta aagttccact atctaaagcc aacctcttcc caagttctga
     2341 tacagtttgt tcttcaactt cccatagaac aagcaaagca atatattgtg gataggttaa
     2401 ttgaaacggc tctaaagctt cacgataaag tttagtaaat tgtttggatg cattataaac
     2461 agaaaaacat agttgctctt ctaatatgcg tgtattcgtg tccaacatgt tctcctcctt
     2521 ttaagttgtg tacaatttaa ttgtaaccaa tcataataat gaaagctagt tttttgctca
     2581 aaaaaagcct tacctcattt ttagaggtaa ggcttttgat tatattttag tcttctattc
     2641 ttttaaatac taaagtcgca ttgtgaccac caaagccaaa agagttagaa attactacat
     2701 ttacatttgc ctcacgtgct tcatttggaa cataatccaa gtcacaaact tcatcttggt
     2761 ttttcaaatg aatcgttggt gcaataatat tatcacgaat agtcaatagg gcgaaaatag
     2821 cttctattcc gccagacgca cctagagtat gtccagtcat tgacttagta gaactaatcg
     2881 ctaatttttt cgcatgatct ccaaagacag ttttaatagc ttgtgtttcg tattcatcat
     2941 tgtacggtgt acttgttccg tgggcattaa tataatctac tttatcaggg gtaaggccag
     3001 catcatcaat cgccattttc attgcgcgcg cagcaccttc accgtttgga gctggagcag
     3061 taatgtggta agcatctcct gttgcaccgt aaccaacgat ttcagcgtaa atttttgccc
     3121 cacgtgcttt tgcatgttcg tattcttcta aaataacgat acctgcgcct tcaccaataa
     3181 taaaaccatc acgatcttta tcaaacggac ggcatgcagt ttctggatct ggatttaatg
     3241 acaaagcttt attagcagta aaaccagcaa gtgacatttt agtaatcggc gcttctgctc
     3301 caccagtaat cattgcatca gcgtctccac gctcaataac tttaaacgcg tcgccgattg
     3361 agtttgttgc agttgcacaa gctgtaactg ttgtagaatt aatgccttta gcaccaaaac
     3421 gaatagaaac ctggcctgaa cccatatctg gaatcatcat aggtacgaaa aacgggctaa
     3481 ctcggcgatg accgcgattt aagaaaattt catattgtgt ttcgaaagtt tccattccac
     3541 caattcctga accaatccaa acaccaactc ggtttgcatt ggaatcatca ataactaaac
     3601 cagagtcttg cacggccatt tcagcacttg caattgcata atgcgtaaaa cggtccattt
     3661 tacgagcttc ttttttttct agatattttt ctacatcaaa atcttttaat tctgctgcaa
     3721 ttttaaccgg aaagtcatcc ggattaagtc ttgtcatttt tgcaacacca ttaacacctt
     3781 tttttgcgtt ttcccaagaa gtttccgcat catttccaat aggtgtaaca gctccaatac
     3841 cagtaacaac tactcttctc ttatccattt actcatctcc ttattttgcg attcataaaa
     3901 aacaacttct gtccaatgac agcagctagt ataaagttaa ggctttattt aaaattaata
     3961 atagtgcaca aacaaataaa ccaaaagcct gttccattat aacataaata aaggaaagtt
     4021 gtcctaacta aaataatcgt tagggcaact ttccttttta aatttactgc ttacttaccc
     4081 caacgaatga ttagggcgcc ccatgttagt ccgccgccaa aacctacgag cagaacgtta
     4141 tcattatctt taatacgtcc ttcttccact gcatcaacga gcgcaagtgc gattgaagag
     4201 gacgaagtat taccatattt gtgtactgtt ttcatcagtt tttcttctgg taaattcaaa
     4261 cgctcacgag aagcttccat aatacgaata tttgcttggt gaggaattag taagtccaag
     4321 tcttctttct caagaccagc acgttcaagt actcgtagtg aagcttctcc catttggcga
     4381 actgcaaagc ggaatacttc acgaccgttc atataaatct ttttattttc atctaaattc
     4441 aagtatttac cacctgatcc atctgaacct aagtcaaatg aaagtaaacc atgatcatca
     4501 gaaactggtc ccataactac agcacctgct ccatcaccga ataatactgc tgttgtgcga
     4561 tcatcccagt tagtgatttt agataattta tccgcaccga caaccacgat atttttatat
     4621 gcacctgttt taatgaattg tgctgcagtc actactccaa aagtgaaacc agcacaagct
     4681 gcctcaacgt ccataccagc agcgtttttt gctcctaagc ggtcttggat aatattagca
     4741 actgaaggaa atgtcgcttc ttgtgtaaca gttgcaacga taaacaagtc aatatcatct
     4801 ggtgtaagac cagcattctt aatggctacc tttgctgctt catatgctaa atcatgcgta
     4861 tattcgtcat cacgagcaat tcttctttcc tcaataccag ttcgagttct aatccactca
     4921 tcagatgtat ccataatttt ttctaaatca aagttagtta ctattttttc aggtacgtat
     4981 ttacctactc ctaaaattcc tgcgttcatg tgttctcctc catatcaaac tacatcaggg
     5041 tgaaaataaa ttttctcctg gttattttta tgacctggtg ctaattttaa cagagaacta
     5101 tcaattaagc aattggattg ctactttttt attttacttc taacgcttta ttaggattgt
     5161 tttcagcaaa accgtctgct tttgaccagc cgattacttt cccatcgtct gacttaatac
     5221 ggtaccaata ttcatttttc acatctgcac gacggtcaat atctaattct ttccctagat
     5281 aatcattaag atttttgact acttttgaat tatcttctac tgggtaagca tagatttttt
     5341 gatccgaatc ggtgatatat ttatctagtt tcacatttgt ttcatttttc ggggtataaa
     5401 aaacttctac agcattactg tttacccatc caatagtttc gccttgattt agaagctgat
     5461 accatgttcc tttttctgtg acagcttttt gagaaattcg aaggctttta tttttgtaat
     5521 ctttgacgct acctattttt tctgcgccct ctgtattata tggttttgtc caaattgttt
     5581 cattgctaga atctttaatt tccgcatatg ctaattggtt ttctgttgat gtcactgtat
     5641 cgtaaatttg gtcatattga tccaaattgt aattttcaat agttgaaatg agtttttctg
     5701 cgtatgctgg gtcagttgca taacctgcat cttgaattgc gtatgctgct tccttatagt
     5761 ttgtttctcc gatgaccgct gagtaaagat ttgcattacc agatactccg ttaacaaaaa
     5821 gttgggcatg atcgactaaa gatgcttttt tgtctggata ctttctgaaa tcagcttgtg
     5881 tgcggtaggc tttcccgctg ctaaattctt gcgttcccat tgaaacggaa tttccttcat
     5941 agcttccttt aattccaaac aggttgttag ctgaagttga taagccactt ttaccccaat
     6001 tggattctag aatagcttgt gctaaagtga cactcgtcaa tattttttct tctttttgta
     6061 gatcttgtgc atcatttgct atggattgta taaattgttg ttgtgataaa gtcattcctg
     6121 cgtgacttac tgaagtttgg ctcgttcctg ctgcctccgc ttgaacaaaa ggtactagtg
     6181 tagaacttac gatgacgctt gctagtaaaa tctgcgtgaa tttctttttc attatcagtt
     6241 ggcacttcct atccaaatta gttagttccc ccaatttaaa tggctctgtc tctgttaacc
     6301 ttcttcattc tagcattttc attctgagag cctactaatt ttttgatgaa aaatttatca
     6361 taaagtaagc aaaatggcta ttttagaggg ttcacacata cctatttaca tttgacaata
     6421 ttatgtcgtt acacatttac cccttaatac tactattctt cgttgaagtt tcatttcctt
     6481 cctttttttg ataatcgcat tttcaaatga tatatgattg gataatctaa ttttatgtgc
     6541 taaaatgtat aatgaaatag atgaaatggg gtgtaaggat gcgttatgtg gtaactgtag
     6601 tttgggtatt cttactttct ttaatggcag aattcgttct ttcttccatg ttatatgtat
     6661 catttgatat gacgcgggct attattttaa cagtagggtt atccttcttc attattttaa
     6721 tcactttctt gatgcctaaa gatagcgaag tttatgactt taagtaaaca tccaactttc
     6781 tgatagcgag aactgacttt tcaggtgcag ttcaaaaaaa gaagctcttt ccaatatatt
     6841 ggaaagagct tcttttttat ttatccaagt aatatttatt tactggtttt aaatcatcgt
     6901 ttaattcata tactagtggc acgcctgtcg gaatttctaa atccattatt tcatcatcgc
     6961 caataccttc tagaaatttc actaatgctc gtaaactgtt accatgcgcc gcgatgacta
     7021 ctcgccgtcc ttctttaatt tctggagcaa tcgtgtccat ccaataagga ataacgcgtt
     7081 ctaatgttac tttcaagttt tcacctgccg gaatagcgtg tgtatcaagg agttgataac
     7141 ggcgatcatt tttggcttgt ctttcgtcgt tttcttctag taatggtgga agagtatcat
     7201 agcttctgcg ccatttttgt acttggtcag caccatattt ttcagcagtc tcttgtttgt
     7261 taagaccttg aagtgcgcca taatgccgtt cgttcaagcg ccaagattta tgaactggta
     7321 cccacatttg gtcagattct tctaacacat aattaagtgt tttaatagct cgcgttaaaa
     7381 cagaagtgaa ggcaacatcg aattctaagc ccgcttcttt aattcttttt cctgcagtca
     7441 ttgcttctac aacgccttct tgtgacaagt caacatcatg ccaacctgta aataaattca
     7501 atttgttcca ttcactttga ccatgacgaa ttaatactaa tttcatcttc ctcatccttc
     7561 cattttcgtc tattatctaa acgactaatc caaccaaagt tttccctttc aagcgaggtg
     7621 tcaaaccttt tctatgttat tctgtgactt taaaagtaaa ttctttatct gctaaatcaa
     7681 tttctacaga tgaatgtggc atgattttac ctgatacaat ttctctagca agtggcgttt
     7741 caacatgacg cacaatatag cgtttaagtg gtcgtgcgcc atataccgga tcatatgctt
     7801 cttccgcaat aaatgctttt gcattatcgg aaatagtaat cgtaatttct tggtcggcta
     7861 aacggatttg aagttcttct actaatttct ccacaatgcc tttaatatca gctagtgtta
     7921 gtggtttaaa tagaataata tcatctacgc ggtttaagaa ttccggtttg aattcacttt
     7981 gtaaaatttg cattacatcc gattctaatt ccggtgaaat ttcgccttct tcggttcttt
     8041 caagtaataa attagagcca atatttgacg tcataataat tactgtattt ttaaaatcaa
     8101 ttaatcgacc ttgtgaatct gtgatacgtc catcatcaag tacttgtaat agtatgttaa
     8161 atacatctgg atgagctttt tctatttcat caagtaggac gattgaataa ggatttcgtc
     8221 ttacagcttc agtaagttga ccgccttctt catagccaac atagcctgga ggagctccga
     8281 caagtcttga tacggaatgt ttctccatgt attcagacat atcaattcga atcatatgat
     8341 cttctgaatc aaacatatta aatgcgagtg ctttggcaag ttctgtttta ccaacacctg
     8401 ttggccctag gaaaatgaat gagccaattg ggcgtttcgg atctttaata ccagcgcgtg
     8461 cacgaagtac agcatcacta actaattgaa cagcgtcatc ttgaccaatt actttttgat
     8521 gaagttcatc tgctaattta agcagttttt cgcgttctcc ttctactaac ttggtcactg
     8581 gaattcctgt ccaacgtccg acgatttctg caatttcatt ttctgttact tcttcttgta
     8641 aaatccggtc ttcttgtgca gttttttcgc gattttctgc ttctaactct agtaattctt
     8701 tttccacagc cgggatttta ccgtgtcgta attctgctgc tttatttaaa tcataattat
     8761 tttctgcttc ttctaattca tgacgcaaat gatcgatttg ttctcggacc tcacgaattt
     8821 tactaatttc gtttttctca gattcccatt tcgatttcat ttgattggct tcttctttgt
     8881 agtcagctag ttcgcgttgc aatatttcta aacggcgttc actcgctgga tctttttctt
     8941 cttttaaagc cgcttcctca atttctaatt gcattacttt tctcgttact tcgtcgagtt
     9001 cacttggcat cgagtcaatt tcgacacgaa tagttgcgca tgcttcatct actaagtcga
     9061 ttgctttatc tggtaagaag cggtccgtaa tataacgatt agaaagactc gctgctgcaa
     9121 ctaaagcatt atcatgaata tttaccccat gatgaatttc aaagcgttct tttaacccac
     9181 gtaaaatgga tactgtatct tccactgttg gttctgggac aagtactttt tggaaacgtc
     9241 tttcgagtgc ggcatctttt tcaatatatt ggcggtattc atctaacgta gttgcgccga
     9301 tacagtgtag ttcaccgcgg gcaagcatcg gttttaacat atttccggcg tccattgcgc
     9361 catctgtttt acctgcgccg acaatcgtat gaatttcatc aataaatagt aaaatttgac
     9421 cgtcactttg tttcacttct tgaagtactg ctttcaaacg ttcttcaaat tcaccgcgat
     9481 atttagctcc agcaataagg gaaccgatat caagcgagat aatcgtttta tctttcagcc
     9541 cttctggaac gtcttttcga acgattcgtt gtgctaaacc ttcgacaatg gctgttttac
     9601 caacgcctgg ttcacctatc agaactggat tattttttgt ttttctagat aaaattcgga
     9661 taacgttacg aatttctgca tcgcgtccga ttactggatc gagtttacca cttctaactt
     9721 ccgcgactaa atcacgtcca tattttgtta aggcttcata gttttcttct gcattttgag
     9781 aagtcacttt tttccctcct ctgattttta aaatagcttc ttgaatttgt tttttagatt
     9841 tatgttgttt ttttagattc attgttattg gatttgattt ttgatccatg acagctaaga
     9901 ttagatgttc tgttgataca aaatcatcgt ctaattgttt ttgttctttt tcggcatccc
     9961 gcatcaactg aaaaagtgct tggctcattg cttgaccata gtttacaccg cttccagaga
    10021 ccacaggaat ttttgttaaa gcatcttcta ctgttttttg aagtgcatct atatctactt
    10081 ctgctacatc atatacacgt ttggcaaaat cactctctgt taataacact ttaaaaacat
    10141 gagcgacgtc gatttcttga tgttcggatg caattgctaa attttgagcg tccgcaattg
    10201 tttgctggac ttgttgcgta aatttttgta aatccattca ttcgtcctcc ttataaaaga
    10261 taagtctgac cttttttgac cttaacttta ttatagtttt ttatcttgct tttgtctaac
    10321 aaaaaccatc ttttttatag aaaaagatct gccaattttt aggttggcag atcttctgaa
    10381 tttcttaatc acgacctgta aataggcgga gtaagaacat gaataagtta aggaaatcaa
    10441 ggtataaatt cagcgcaagc attggtacat ctgctaattc cacatcgcgc ttcatgattt
    10501 ggttgaagtc atacaaaata tatagtgaga aaataatcgt tccgcctgct gaaataattg
    10561 ttgatagcat agaacctaat ggtaaaaaga ctcctacaaa gctaaatata acgagaataa
    10621 taatcgcagc gaataaagca ctgcttaaga aagataagtc ttttttcatt tttgcgccaa
    10681 taaaagctag cgttgtgaaa gtaacggttg ctgtaacaaa tgccattaga acggcggcac
    10741 cttgccctgc accaaaataa tatgtcaaag ttggtccaag cgttaagcct gtgacaaacg
    10801 caaatgctag tactactggg tatcctacca ctttattaat agttttactt cgacgcacta
    10861 ccatcgctgt gataagtaac gcgacttcta agacgacaag aggcaaataa agttctggac
    10921 ttaatttact cccaatcgca gcaccgatag atgcaagtag caaagaaaat acaaaccaat
    10981 taagtatttt ttgcataata atttgtttct cagttctctt ttctgtgttt gctcgctcgg
    11041 atgtgtgatt gatttcgttc attaacattt ctcctcttcc aattgattag ttttattata
    11101 tcaaaagaat tattacaatt ctatcggtct tgcgttggaa tttcacaaaa aaagaagcgc
    11161 acgaggcact tctttaaatt aaatcaaatt gtttcaagcc aagcataatg ccgtcactat
    11221 tgttatcttt cgttacaaaa gtagcttttt cttttaataa tggtacggca ttttccattg
    11281 caatggcata atccactgcg ccaaacattt ctaaatcgtt cattccatca ccaaacgcat
    11341 aagttggaac gtcttgatag cccattactt caagtagctt cgagatacca actgctttag
    11401 atccgccttt tcttaagacg tcattactaa atggtgtgtt gcgaacaaat tgtaattctg
    11461 gaaagcgttc tggaaaataa tcatcaccag tttcgagtaa aagaagagcc atattgatgt
    11521 tttcttcttt atacatatta ggccttactt ctggcattgg ctcgcctaaa aaatcatagt
    11581 gtgcttttac aactggtgta cttgcggttg cgccaattct tttatcatta taatagcaaa
    11641 cctctacatt ttgtgattta gcttcttccg tcaaacgagc aagtaaatca gcatcaatca
    11701 catcttcgta cactttttct ccttcaaaga tagccatttg tccgttcatc attactgcgg
    11761 attcaatgcc ggtaattttc atttgatgac tgatttctat gagcgtccga ccagtagcaa
    11821 taacaggaat aacattattt tctcgaagtt tatcaagtgc ttgaagcgag gtatcaagta
    11881 ctttggattc actatttaac agtgttccat ccatatcaaa aaaacaaatt ccacgtggtt
    11941 tcacattatt catcctttac taacataata tatccatcat accaatctta cggatacaaa
    12001 gtaaaggcta tttgtacata acaaaatctc ctgtatgctc aaaaccaaga cggtggtata
    12061 tctcaccagc aactggatta tcgtaaaata aacatggttt ctttccttct gctaatacat
    12121 cgcaacataa tttttttaga agtgtacttg caaaaccacg ctgtctatat ccatcacttg
    12181 tcgctacacc tgtaatcatt gctgaaaagg aattttctgc agatgtttct gctacagcaa
    12241 caacttcttg gtcttgttca atataataaa ttcgtttcac gcctttttca atttggcgaa
    12301 taattaattc ttcattttca tcgcgtgaac caaattcttt aatgtgtttg cgcattttaa
    12361 taattggagc tacgtcttct gccactgccg ttctgacaat aacgtcttga tttacagaaa
    12421 tacgatttac atgttcgcat tcgcaaaaat aagtgtcttg tcttttttcg gcaagttctg
    12481 gtaaaaatgg ttccaattcc tttgtgacac gagaaatacc gctaacttcg tatgtatcat
    12541 gcttagcaat aatttctgag aaagcttttg catcaaaatt agcatctttt gaatacggta
    12601 agaaaaacgt atcgaatcga agtaacaatg catgtaattt gtcttctgaa tcgaattcac
    12661 cccaaagatc ttgcacatca ctctcgtaac caaaattttc gatatcccca ataataaata
    12721 agttgagggt tgcttcgggt tttaaaagtg ccattacttc ttcattatca gatacagtta
    12781 gttttctaat catgtgccac actcctattt tgaaaattgt cttcatttta cgtgagttag
    12841 gtaggttcgt caagccctga atcttactat tttgcgccat ataaaaaagc tcgggacaat
    12901 tagtcccaag cttttatgat tcgtaatgaa tttcgccaat tttcaacatt aagctgatag
    12961 cgttgaattt ttcatctcca agatgcattt tgtttgtatc ttgaaaagtg ataggtgctg
    13021 ctgtaatcgc ttctttcggt tgttcaaaga acttttcttc aagtgccaaa ctttctgtaa
    13081 tttgcgatat gtatttttgg aatttatttt cgtttctcat tttcccaatc atcaatgctt
    13141 ttaaagtgtt ttgagaaatc ccgactgcaa gcgcgaatgt tctatgagtg tatccattta
    13201 ttttcatata aagtgacaaa ttagtggcaa ttctttgttt ttctgccttg tttttcattt
    13261 gggtgaacct cctgtctttc tatagttatc attatgcccg gtgaagatga gaatttgatt
    13321 aaaacttcat agtatttagc taaaaatatt gaaaacgttt tctttgtttt aaaaaaatat
    13381 gccggaataa cgaatatccc ggcaagtact ttatttaatt gctatatttt tcccaaacaa
    13441 ccgtccttaa tacttctaag aattctgggt ccgagtttgg cattggtggt cggtgataaa
    13501 tcgcgcccac ttcatcggta actactttac attcataatc attatcatat aaaacctcta
    13561 aatgttcagc cacaaatcca actggtgtat agataaagtg tttatatttt tctcgaccgt
    13621 aaagttctct tgttaaatct tgtacatcag gtccgagcca cggctcccca gttttccctt
    13681 cactttgcca acctaacgcg taatgaggta ctactacttt ttcgaaaatg aaatctgctg
    13741 tttcttgcag ttgatctggg tacgggtcat tatgttgttt aattttctcc ggtaaactgt
    13801 gtgcggaaac aattaaaaca gtatccaata attcatcagc tggaatttgt tttgctgttt
    13861 cgttaattct atcagcccac atttgaataa atttgggttg tttgtaccaa tcattgattg
    13921 ctttgatacg aaggccacct agtttatcag ctgcatcttt tgctcttttg ttgtaagctt
    13981 cgacgctaaa gctagagtag tgtggcgcta aaacaatcga gattgcttct tctattccat
    14041 ctttatgcat agcttctaca gcgtcttcaa taaaaggttc aatatgtttt aaaccgatat
    14101 atgccttgaa ttctacttcg tcttgcgatt catttaacgc tttttctaat ccataggctt
    14161 gtgcttcagt aatttttgcg agtggagata atccaccaat tgcatggtat cttccgcgca
    14221 aatccgcaat catttcttca cttggcttat gaccatgacg aatatctgta tagtaacgtt
    14281 caatatcttc atctttgtac ggtgtcccgt atgccattac aagtagacct acttttttag
    14341 tcattttata tcatcctttt ttaatagaat ttcgctacgt tcatggatgt aattagttag
    14401 tttcttcaac atttctggtg gtacttccgg gaaaacgcca tgtcctaaat taaaaatata
    14461 acctggttct agtacgcctt cttgcaaaat acgatttgct tcttttaaac atttctctgg
    14521 tgcaagaagt gtggacggat ccagatttcc ttgaattgct tttgttggaa cttttttccg
    14581 agcacttgtg atggtttcac gccaatcgac gccaacaaca tcaagcggca ttgtttccca
    14641 ttctgctaaa agatgactcg cgccaactgc ttgcataata attggggttg ttggatgaac
    14701 tgctttcact tctctaacaa tcatttcgat tactggtcga atgtattcag catagtcagc
    14761 tcgactaagt gcccctaccc aagaatcaaa caattgcacc gcagaagcgc ccgcattaat
    14821 ttgcgcaatt aaataattcg cagtcattcg accaagtttt tccattagta ttgcccaaac
    14881 ttctggctcg cgatacataa aactttttgt ttggtgataa tttttcgatg gaccaccttc
    14941 tatcatatag ctagccaaag taaatggtgc acctgcaaag ccaattaaag gtacatctag
    15001 catatcatct gccaataatt ttatcgtatc taggacataa ggaacttcta tttctggttt
    15061 gaacattgtc agtttttcta catcttggaa agatctaata ggattatgta tgactggacc
    15121 aataccagat ttgatttcaa cgtctactcc catccccgga agtggtgtca taatatcttt
    15181 gtataaaatg gctgcatcaa caccatattg atctactggt aatttggtta cgtaagcaca
    15241 tatttctggc tgatgagtaa tttcaaatag agagtatttt tcttttaatt tgcggtattc
    15301 tggttgagat ctccctgctt gtctcatata ccaaaccgga attcggtcaa cttgttcttt
    15361 tcgcgctgct tttaaaaata aatcattcgt tatttttgtc attgagtcgc ttcccttctt
    15421 tgttcattta cacacaatgg gcaacagaac aataaataac ttctccagat aaaaggatac
    15481 tagaaaattt gtataaaacc aaacaaattg cctatcagct gtttcaatta tgaaaaacgt
    15541 ggaaaataaa ggtgtaatca tttttcttaa tggaataaaa ctgaaagaag gacttattat
    15601 gaaaaaagta tttatcacga ctggaacgga gcactatctt cgtcaattaa tggcaaatta
    15661 tattggcgga aatgtgacac ttctacaaaa cttttcccaa tcacttttgt atcaagagtc
    15721 gactggtgaa aaacttttcc aagaaggcgc tgagtatcga gtattgcaaa gcagtggttc
    15781 cttaaaaggt tttggagtag tcgtctttga atatatccac ctccgcgatg aagaaatccc
    15841 tattttcttg caaatgtatc aacgagcgag tctgcatttt agtgaaacgc ctggcttgca
    15901 aagtacaaaa ctcacaaaag cgatgaatat gaataaattt ttaattattt ccttttggga
    15961 ttctgaagta ttttttcatg actggaaaaa aacaccttta tccaaagaaa ttaccaatat
    16021 catgaaaaaa aataatactc aatctggatt ctcacatgaa gatatttatc attatccaga
    16081 attttcccat gatgctaaat aggaaaaagc gatttggacc actcatccaa atcgcttttt
    16141 ttattcgtac atttttttca ttctggctgg tgcataaagg aacgtaaaga taactacaaa
    16201 agccaaatta attcctaaaa tgatcatccc actgatggtc ccattttgtg caatgccaat
    16261 cacactaaag agtagtgctt gagcgagtaa caaaatccgt agaaagtgaa taaaactgcg
    16321 atgacgataa cgatcattaa tcggataaag tcgtagcata atttgtgcat cataatgttt
    16381 taacatcggg atgaattgaa aaccagttaa atacaaaaat agtagtgaga aaatgatatt
    16441 taaataaaaa ccttgaacaa acacgagtaa aatcacggca attacggtaa gtctaatgta
    16501 aagaccggca tattcatttg ttctaataaa tgtccgactg aacaaataag caaatgtttt
    16561 tcttttcgca taaggaattg gttgataaag aaaatcgaga taactccgtc tccgaaccgt
    16621 tcctcgcaaa tgaggtacat ccgtaaatag attcactaaa cgatagaacc gattcatccg
    16681 cgcttcttct ttatccacta aatattccca gcgtaaagtt acttttgccg ttttagttcg
    16741 aagccagtag taactcgcca caagtactac caaaaccaaa ggaatagaaa tgtaaggtgc
    16801 ggcgactaac gcaatataaa ttaaaatagc attaaggata acacgaataa acatccacgt
    16861 tgtatccgcc tcttctaatt tcatactttc ccaaccaaaa taaatgttcc acacttttag
    16921 catactgagg acaataaaca aagtgaaaaa ctggctgtac ggaacctttg tcacttccac
    16981 atacatcggc atacaaaccc caagcacaat tacaaaaaca tataattgca taaagaagct
    17041 cgctattttt gcttgggtaa aataactatc cattgctttt tcctgtacaa ttaagtaaac
    17101 aatatccggt tttttcagca acgtggcaac aggactaatg gcaattgaag cagtgagtaa
    17161 aataaccatt aacggaataa cgggaaatgt gggttcaagc gtcttcaccc aaccagcgta
    17221 ataaaaaatc cccgctccaa gtccaatcac aagcacaaaa agcaaatgat cattaaacat
    17281 ataacgaaga tagcgcatga cttcggtcgt ataggcacta aaacgttctt tccaaagcgc
    17341 tttgctgtca aatatcatct tcatcagctt cctcttcctt tgtcaactga atgtaaattt
    17401 catcaagtga agctcccggc atttcgaagt ttgtttgcaa gtctttcagc gttccctctg
    17461 cgcgaatctc gccttgatga ataataatga acgtatcgca atatttctca gccgttgcaa
    17521 gtatatgcgt tgacattaaa atgcttgcac ctttactacg catttcgtcc atccagttaa
    17581 gtaatgactg aataccaagc ggatctaaac caacaaaagg ctcatcaatg atatataatt
    17641 taggttcaat taggaaagcc gacataatca ttactttttg tttcatccct ttagaaaaat
    17701 gggctggaaa ccaattaagt tttttctcta aacg
//
LOCUS       DASDYO010000056        17635 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.056, whole genome shotgun sequence.
ACCESSION   DASDYO010000056 DASDYO010000000
VERSION     DASDYO010000056.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 17635)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17635)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17635
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.056"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            188..2662
                     /locus_tag="U0290_001567"
     CDS             188..2662
                     /locus_tag="U0290_001567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2301611.1"
                     /translation="MKKILHIVIALSVICSIILVPVDWSAKAGGNNKRDDLIKSVSFY
                     NSNGQNVTAKENYNEKLNYFLEVAFGGNSFQKGDYFNITLSSDALLYTEKAYDLKVDI
                     DPTAVTNEQVVGKVTVEKINGSPTLHFVFTEDSESFFINSFDASFKIQVMPAHGDKNV
                     INLSYSGAAKNFKNIGTSSVEWNVNMADDWPPVGISDFSKISGDLYHAILVYEKPSSK
                     VNYETEILVSYPLFEKRIPLGNVQNIKIEVWDEAKEIYRVGVAGVDYGTITYDVGTPF
                     VGGPIFQMNCTIPFKGISTKTRVSFDIDTNVDGKPGTTDPYLVSLSSLSSATKSLEFY
                     PVNNAVTQMTATFFGKVTTRFEDELGNPVTFDNYSTVTTPGKVNQDGKFEIAEPFLHN
                     SVQNVDKHAYDTLLDTNKYKLLEVTSPNKLSETADNLSIQIKRGYQNDVLYKIKALQK
                     PVISALPEIEYSKTVNRTMEEFLEDVEAKTDIPADIDCDLTNVKWGVPGDYLVLITAV
                     NEDNQAADPVPVTIKISKNPAPVITVDPEIIYDKTVTKEESTLLNEVNARTNDGSTIT
                     SNINDKVKWGVPGDYEVTLNAVNEDGVAAESKTFIVRILKSPAPIITVDPEITYPKTI
                     TKTEAELLQEVNAQTNDGSPLVSDMNDKVKWGVPGDYEVTLNAINEDGVAAEAKTFIV
                     RILKSSAPIITVDPEITYDSSVIKDERELLKDVHARSSDGSVLTSDSQVKVKWKKTGS
                     YTVTLNAVNEDGISANSVQFTVHIVDAKAIPVVIEEKPESTPKPDTKEKVVIKKEKLP
                     KTGDTNTKTILSGIFCLGAWYLLRRK"
     gene            2861..3514
                     /locus_tag="U0290_001568"
     CDS             2861..3514
                     /locus_tag="U0290_001568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724402.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2301612.1"
                     /translation="MDDWSTLIGELEHNTPEKVWIVREELNISEVFEIQKLEAHFILV
                     LEGVLRMENEHQQILHYFRENNVIYQSPYELRVQNKLRLVAETPAHIVLLHREFFLNY
                     ATNQPAYSEKLVRAIMDNAASFMFELMKNDLKSEDRLAYSLQQLCQSLELEVKNEFYL
                     LPHYINKNKLALYSDISRKSLYKYLQNLERKGQIKMNGNQILVRISRFTNSENVDWL"
     gene            3703..5319
                     /locus_tag="U0290_001569"
     CDS             3703..5319
                     /locus_tag="U0290_001569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2301613.1"
                     /translation="MKLGKVGALLLGTALVFQAPFQVFATSVNGEEQVKKEAAAPKIS
                     VNKQTLAATSDLEQTVGEAITKTIHLQDQALPNNEWGSYISDVKVTLSNMDGISYDVK
                     YGPLSEDGTHYQYADITLSGAPTKAGTGSISLEYYDGAGNGGVYSYSVNTKSKTTIQY
                     VDGDGNKLAEDTVKTGDLNTAYTSEPKTIDGYEVDETKLPSNQNGQFAETNQTVTYIY
                     SKTKSEVNKGTVGISFYTPDGSRRELKSSLDLSYAYPDGVPTDTVTFGDLAKNTTYKD
                     LRNTPDAPTLLWNDLLHYMVDYMNGDIDAAQFEEAVGLTPANFDLDFISRNFEGYKFD
                     EAMYQENLSKLVTFEQDGDQVDLQVPFKKVEVGADITVKYVDTAGNELASVETLSGDV
                     DDNYTSEAKTIDGWTLKETPNNATGVFSKEAQTVTYVYEKNEDTDVTPAPDNSADTND
                     DSNSSDNTATTDDNSSSAVKEKAQTQASSPKAGKVTTQESTSNKVTAQSKESLPKTGD
                     NVLESSLLVGLGMLLLGGLFVFLRKTRKVK"
     gene            complement(5405..5713)
                     /locus_tag="U0290_001570"
     CDS             complement(5405..5713)
                     /locus_tag="U0290_001570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724404.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxymuconolactone decarboxylase family
                     protein"
                     /protein_id="HEM2301614.1"
                     /translation="MKVSKSFEAFAKEAPEVHSAWMETVHKLDAASKLDKKTEELAYI
                     AVMAATRLESGLPFHVKMAKTNGATRDEIISAVLVGLPAVGNTVISALPVALEAYDEV
                     "
     gene            complement(5776..6591)
                     /gene="pdxK"
                     /locus_tag="U0290_001571"
     CDS             complement(5776..6591)
                     /gene="pdxK"
                     /locus_tag="U0290_001571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxine/pyridoxal/pyridoxamine kinase"
                     /protein_id="HEM2301615.1"
                     /translation="MTIKKTLTIAGSDSSGGAGLQADLKTFEEYGTYGFSAITTIVTM
                     DPDNNWAHGVTPIDAQLVREQLKTILSGGPVDAMKTGMLGSIDIIKATREAIDKYDLK
                     NVVIDPVMVCKGEDELIQPENAEAIRDLLLPKATITTPNLFEAGQLSGLGKLTTLDDM
                     KKAAKKIIELGAKYVVIKGGKALESDKAIDLLYDGKEFTIYEVEKISPSHNHGAGCTF
                     AAAITAGLAKGLTVEEAVAKAKDFVTAAIKGGFALNEFIGPVWHGAYNKAENR"
     gene            complement(6616..7482)
                     /locus_tag="U0290_001572"
     CDS             complement(6616..7482)
                     /locus_tag="U0290_001572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464190.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2301616.1"
                     /translation="MIKVIASDMDGTLLNSDIEIAQENVEAIEKARAKGIHFVLCTGR
                     MYDDAMGLINKANLYAPAICMNGAEIRDEHGKIILQHPIDRNLARNTYNTLTELGMYT
                     EFFTDMGPITTDKARGKEFMIEMHKRIHPDVPAETIMDKVEERFESKDVHEIPDVERI
                     LGNKDLTILKFISFSSDKDILAKAKQKLEKDSELSVTSSFSDNIEITHREAQKGISLQ
                     YYVEKLGVTLDETFAIGDNMNDISMLKMAGYSVAMGNGEEEVKDLAEHVTLSNDEHGV
                     AAAIYKMLETND"
     gene            7656..8219
                     /locus_tag="U0290_001573"
     CDS             7656..8219
                     /locus_tag="U0290_001573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464191.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="maltose O-acetyltransferase"
                     /protein_id="HEM2301617.1"
                     /translation="MKTELEKMIAGEMYDPSDRELAHGRNRARKFCREINDAMDSESR
                     ASVLKRLFGGTKENVYVEPDFRVDYGSNIYVGENFYANFDCVILDVCEVHIGDNCMMA
                     PGVHIYTATHPLDPVERNSGLELGKPVEIGDNVWIGGRAIINPGVKLGNNVVVASGAV
                     VTKSFPDNVVLAGNPARVIKTIEVEEK"
     gene            8216..8479
                     /locus_tag="U0290_001574"
     CDS             8216..8479
                     /locus_tag="U0290_001574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5327 family protein"
                     /protein_id="HEM2301618.1"
                     /translation="MIIADSKIFEQMENELAKAKAATTKASQDKHLHGLMLLVQLAKT
                     GDETTAAVEPIAIQSAEPAQIASMDGKKIELEDGANGDSLLDF"
     gene            8489..8866
                     /locus_tag="U0290_001575"
     CDS             8489..8866
                     /locus_tag="U0290_001575"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF423 domain-containing protein"
                     /protein_id="HEM2301619.1"
                     /translation="MKKTIITGAIFAGLAVLLGAFGAHALKDVLGSYASTWETGVQYQ
                     MFHAGGILVVGLLMEKQASRLYTWAAILFSVGIVFFSGSLYVLSISKVSILGAITPIG
                     GVCFVVGWFLLILGVSRRTMSRY"
     gene            8980..9915
                     /locus_tag="U0290_001576"
     CDS             8980..9915
                     /locus_tag="U0290_001576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464194.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301620.1"
                     /translation="MTYALEIKGLRKIYSTGVEALRGVDLTVEEGDFYALLGPNGAGK
                     STTIGIITSLVNKTSGQVSVFGYDLDTDIVRAKQQIGLVPQEFNFNPFETVQQIVVNQ
                     AGYYGVSRKEAIKRSEKYLKQSNLWEKRNERARMLSGGMKRRLMIARALMHEPKLLIL
                     DEPTAGVDIELRREMWTFLRELNESGTTIILTTHYLEEAEMLCRNIGIIQSGELIENT
                     SMKSLLSKLQFETFIFDLEPYEEAFEITGYNHVFEDKQTLSVEVERNQGVNHIFEQLS
                     EHGIKVLSMRNKSNRLEELFLKITEEKHQVGEKHV"
     gene            9908..10678
                     /locus_tag="U0290_001577"
     CDS             9908..10678
                     /locus_tag="U0290_001577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464195.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301621.1"
                     /translation="MFNLYFTALKSLAAKETNRYMRIWVQTLVPPVITTSLYFIIFGK
                     MIGSRIGEMNGFSYMEYIVPGLIMMSVITSSYANVSSSFFSQKFQKNIEEILVAPVPT
                     HIIIWGFLIGGIGRSVLVGALVTLISMVFVPIHIHSWTIGIITFLMTAILFSLAGLIN
                     GIFARSFDDVSIVPTFVLQPLTYLGGVFYAISMLPPIWQAISKVNPIVYMISGFRYGF
                     LGVTDVPVAISLSILVVFSAVLYSICWYLISKGRGLRS"
     gene            10938..11822
                     /locus_tag="U0290_001578"
     CDS             10938..11822
                     /locus_tag="U0290_001578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2301622.1"
                     /translation="MMNKENPLNKYHTGKFEKQRQDYPGLQSKMTPVPDTGESSYQGA
                     NKLTGKKAFVTGGDSGIGRAAVIAYAREGADVAINYHPDEEVDAQEVKAIVEEAGQKC
                     VLLPGDLRKEGLAKDLVKKAYNELGGLDILVLNAGLQQYQLDIQKLPAEQLRDTFEVN
                     VFSVVFAIQEALNYLKAGASIILTSSIQGVKPSAHLVDYAMTKSSLISLTKSLAAQLG
                     EKGIRINAVAPGPIWTALQISGGQPQDSIPAFGQDQPLGRAGQPAELASAYVLLASDE
                     ASYTTGQVYGITGGAPIN"
     gene            11840..12016
                     /locus_tag="U0290_001579"
     CDS             11840..12016
                     /locus_tag="U0290_001579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464197.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2188 domain-containing protein"
                     /protein_id="HEM2301623.1"
                     /translation="MPWTKNDYPDSWKNLRKTEREKAIEIGNALLKDGYSESRAIPIA
                     TSKAEEWYKNHKES"
     gene            12141..12749
                     /locus_tag="U0290_001580"
     CDS             12141..12749
                     /locus_tag="U0290_001580"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464198.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301624.1"
                     /translation="MNKRRWIFSTVVAAFLLIIGGFLVYQQMTPKPFTEVVAEAKIDG
                     YESGDELENASTVIVTGQLEKRGDSIIERASDDAVIGVYRMSTFKIAQVLKNETDDNL
                     AKEMTISVYENEGYDAKANTTYHIAGYTKMEKEEKYLLLLQKDSEDDYYVPTAVIFGK
                     INLNPNKRNELFPKNSDTESAINKVQAEVLKNLENEIERENK"
     gene            13661..14089
                     /locus_tag="U0290_001581"
     CDS             13661..14089
                     /locus_tag="U0290_001581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF805 domain-containing protein"
                     /protein_id="HEM2301625.1"
                     /translation="MGFLEAYKSFWRNYVNFSGRAPRSAYWYVVLWNVIIFVILYALA
                     FIFGISAIMEAAMGGTGMAGGGGAIVLVIILWLYLLAALLPTISLMVRRLHDSGKSGF
                     FVLLSLIPFAGGIIMLIFMCLESDGPNQYGDGDIDSKFDF"
     gene            complement(14128..14337)
                     /locus_tag="U0290_001582"
     CDS             complement(14128..14337)
                     /locus_tag="U0290_001582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464200.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301626.1"
                     /translation="MYIEIYTVNGESIRLDDDAKINNISIHELSKADLKNLFNEKCIE
                     LTKYDLTYFINTNQVNWFLVSEGIH"
     gene            complement(14356..15276)
                     /gene="mogR"
                     /locus_tag="U0290_001583"
     CDS             complement(14356..15276)
                     /gene="mogR"
                     /locus_tag="U0290_001583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464201.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="motility genes transcriptional repressor MogR"
                     /protein_id="HEM2301627.1"
                     /translation="MPKSEIRKLLQEIKKQVDNPGNSSTTEIKKMASEAGIDEKTAEE
                     IYHLLTEFYQAVEEHGGIEKYMHSNISWLKIELELLSACYQIAILEDMKVLDISEMLS
                     LNDLRIFPKTPSQLQNTYYKLKKELIQVEDIPKNKPGRKRKTQKNTKKEKTNIFGKVV
                     PAEFKAPTSIKEQISYDKSREKNLVDLLSGVKSNVQLLSENQGEENNVYDLLKSIYSL
                     SSLAVQKEELDKKYQDLQTKCQELEQENSYLKQQNETMTDSFHTLVLQVADFAYASDL
                     DQIQALPLFSQQLVVTLNQLGVFKENYKQM"
     gene            15648..15962
                     /locus_tag="U0290_001584"
     CDS             15648..15962
                     /locus_tag="U0290_001584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464202.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEM2301628.1"
                     /translation="MEYFLSLLKIIVLLAVLAGISYFLVKKNKQANRTRKSENDLIKL
                     KDTLLISHQLRAVLLEADGEKVLAIISNNDIRTVSLKGKTDQNEALFRELLLKEETKE
                     NA"
     gene            15955..16722
                     /locus_tag="U0290_001585"
     CDS             15955..16722
                     /locus_tag="U0290_001585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464203.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein flip"
                     /protein_id="HEM2301629.1"
                     /translation="MRKIASRRVFQVSFIVIFAISLVVFWPGVNVHAESWLDSLGVNG
                     TDGVNSSVALFVLVTVLSLSASIVLMFTHFTYCIIVLGLTRQGLGATNLPPNQVLVGL
                     ALFLSLFMMQPLITAWYDDVYKPSQKEEWSASKVWDETKPLLTKYVAENTYKHDINMM
                     LKAEGEDPVTKKEDAPLMALMPAFILTQITQGFLTGMFIYLAFIFIDLIVSTLLMYLG
                     MMMVPPMTISLPFKILVFIFIGGYGLITNMIFQTIHF"
     gene            16735..17007
                     /locus_tag="U0290_001586"
     CDS             16735..17007
                     /locus_tag="U0290_001586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464204.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthetic protein FliQ"
                     /protein_id="HEM2301630.1"
                     /translation="MNLTPITQIFQDFFYSGLALILPVSLICIVVVIVVAILMAMMQI
                     QDQSLTFLPKIVAFVVALFILGPWMFEHMTDLFVGIFSKLPLMIRV"
     gene            17010..>17635
                     /gene="fliR"
                     /locus_tag="U0290_001587"
     CDS             17010..>17635
                     /gene="fliR"
                     /locus_tag="U0290_001587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HEM2301631.1"
                     /translation="MEFEFFLAVVIVFSRVASFLFFFPLLKGRNIPNSVKVVFGMAIS
                     IPVATGVDVSGITTLPDLLLRVTSEVVFGLALAKLVEIIAVIPKMAGFMIDYDLGFSQ
                     VNLIDPSYGTQNSITAAILDTFFVVIFLSLQGMDYLIYYLMKSFEFTASVSILFEKGF
                     IDLLLGTLGFALASAVSIALPIMGSIFIVNIILAFISKSAPQINIFMNA"
BASE COUNT         5514 a         2825 c         3733 g         5563 t
ORIGIN      
        1 aagaaatatt ttctattaaa tgctttttga caatttttag tcacatttag tctgtaatcg
       61 cttatattaa tggactaatt gggagttcta agtagatata atggttttta gttaggtgca
      121 gagatacgca agaaaacaca ggagggcttg ggacaggtca aaccatacta caaaggagga
      181 gatgtaattg aagaagattt tacatattgt tatcgcactt agtgtaattt gttcgataat
      241 tttagtgcca gtagattggt ccgcaaaagc aggcggtaat aataagcgag atgatcttat
      301 taaatctgtc agtttttata attcaaatgg acaaaatgta acggcgaagg aaaactataa
      361 tgaaaaacta aattattttt tagaagtagc ttttggaggg aattctttcc aaaaagggga
      421 ctattttaat attactttat catctgatgc cttactctat acagagaaag cctatgattt
      481 gaaagtggat attgacccaa cagcggtaac taatgaacaa gtagttggta aagttactgt
      541 agaaaaaatt aatggatcac caacattgca ctttgttttt acagaagatt cagagtcttt
      601 ttttataaac agctttgatg cgagttttaa aatacaggtg atgccagcgc atggcgataa
      661 aaacgttatt aatctttcct atagtggcgc tgcaaaaaac tttaaaaaca ttgggacgag
      721 cagtgtggaa tggaacgtaa atatggcaga tgactggccg ccagttggaa ttagcgattt
      781 ttctaaaata agtggcgatt tataccatgc gattttagtg tatgaaaagc cgagtagtaa
      841 agtgaattac gaaacagaaa ttttggtatc gtatccgctt tttgaaaaac gaattccact
      901 tggaaatgtg caaaatatta aaattgaagt ttgggatgaa gcgaaggaga tttatagagt
      961 tggtgtagcc ggggtggatt acggaacgat tacatacgat gttggaactc catttgtagg
     1021 cggtcctatt ttccaaatga attgtactat tccgttcaaa gggatttcta ctaaaactcg
     1081 tgttagtttt gatattgata cgaatgtgga cgggaaacct ggaacaacag atccgtactt
     1141 agttagtctt tcttccttat catcagctac aaagtcgctg gaattctatc cagtgaataa
     1201 tgctgttacg caaatgacag ctaccttttt tgggaaagta acgacgcgct ttgaggatga
     1261 gttaggcaat ccagttactt ttgataatta tagtactgta acaacaccag ggaaagtcaa
     1321 tcaagatggt aaatttgaaa tagcggaacc ttttttacac aattccgtcc aaaacgtgga
     1381 taaacacgcc tatgataccc ttttggatac taataaatat aaattattag aggtaacttc
     1441 tcctaataaa ctatctgaaa cagcggataa tttaagtatt caaataaagc gtggttatca
     1501 gaatgatgtt ttatacaaaa taaaagctct ccaaaaacct gtcattagcg cgcttcctga
     1561 aatcgaatat agtaaaacag tgaataggac catggaagag tttttggaag atgtggaagc
     1621 aaaaacagat attccagctg atatagactg tgatttaacg aatgtgaaat ggggtgttcc
     1681 gggggattac ctagttctta taaccgcggt gaatgaggat aatcaagcag cggatcctgt
     1741 tcctgtaacg attaaaattt ccaaaaatcc cgcaccagtc ataacggtag acccggaaat
     1801 aatctacgat aaaacagtga cgaaagagga gagcacatta ctaaatgaag taaatgcgcg
     1861 aacaaatgac ggttcgacga taacttctaa cattaacgac aaagtaaaat ggggcgtgcc
     1921 aggcgattac gaggttactt tgaacgcggt aaatgaagac ggcgtggcag cggaatcgaa
     1981 aacatttatc gtccgcattt taaaaagccc agcaccaata atcacggtag atcctgaaat
     2041 aacctatccg aaaacaataa ctaaaacgga agctgaactc cttcaagaag taaatgcgca
     2101 aacaaatgat ggttcaccgc ttgtttctga tatgaatgac aaagtaaaat ggggcgtgcc
     2161 aggcgattat gaagttacgt taaacgcgat aaatgaagac ggcgtagcag cggaagcgaa
     2221 aacatttatc gtccgcattt taaaaagttc agcaccaata atcacggtag atcctgaaat
     2281 aacctatgat tcttctgtaa ttaaagacga aagagagcta ttaaaagatg tccatgctcg
     2341 ttcaagtgac ggttcggtat taacttctga tagtcaggta aaagtaaaat ggaaaaaaac
     2401 aggaagctat accgttactt taaatgcagt aaatgaagat ggcatttctg ctaattctgt
     2461 gcaattcact gtgcatatag tagacgctaa agcaatacca gtagtaattg aagaaaagcc
     2521 tgaatccact ccaaaaccag atactaaaga aaaagtagtt attaagaaag aaaaactacc
     2581 aaaaacagga gatacgaata caaaaactat attgagtggg attttttgtt taggcgcttg
     2641 gtatttgctt agaagaaaat agacaaaaac cgcaagtgaa gtcacttgcg gtttttttgc
     2701 cgattgtagc ttaaaactgc tagagtagat ataaattgcc aatttgaatc attcgcattc
     2761 tagggcttat ttttagaaac gattttttca tggataaaag ggtatagtaa caaaatagga
     2821 acgcggttag gaaaacataa acttgatggt ggtgaaacaa atggacgact ggtcaacttt
     2881 gataggcgag ctagaacata ataccccaga aaaagtttgg attgttagag aagaactaaa
     2941 catatcggaa gtatttgaaa tacaaaaatt agaggcgcat tttattttag ttttagaagg
     3001 tgtcttgcgt atggaaaatg aacatcaaca aattctgcat tattttaggg agaataacgt
     3061 catatatcaa tctccatatg aattaagagt acaaaataaa ctaagactag ttgctgaaac
     3121 acctgctcac attgttttac tgcaccgtga gtttttcctt aattatgcaa caaaccaacc
     3181 tgcttattct gaaaaattag tgcgagcaat tatggataat gccgcgagtt ttatgtttga
     3241 gttaatgaag aatgacctta aatcagagga ccgattggct tattcattac aacagctatg
     3301 ccaaagttta gaattagaag tgaaaaatga gttttatcta ctgcctcatt atattaataa
     3361 gaataaattg gcgctttata gtgatatttc gaggaaaagt ttatacaaat accttcaaaa
     3421 tttagaaaga aaaggacaaa tcaaaatgaa tggtaatcaa atacttgtcc gcatttcgcg
     3481 attcacaaat agcgagaatg tagattggtt gtagaacaaa aaagccgtaa ttactggcaa
     3541 aattaataat tcgaaaaaac gacacatgat tgatagtatg gagtggattt tacacatatt
     3601 tgtcctcctc gcctttgata tactttacaa atcaagtgag acctatacga taattacatc
     3661 atttagataa cttgaaattg taaagttgaa ggggcaaaaa aaatgaaatt aggtaaagta
     3721 ggagccttac ttctcggtac ggctttagtt ttccaggcac cattccaagt tttcgcaacg
     3781 agtgtaaatg gagaagaaca ggtgaaaaaa gaagctgctg cgccaaaaat atccgttaac
     3841 aagcaaacct tagctgctac cagtgattta gaacaaacgg taggggaagc aattaccaaa
     3901 acgatacatc ttcaagatca agcattacca aacaatgaat ggggtagcta tatttctgac
     3961 gtgaaagtaa cattatccaa tatggacgga attagttatg acgtgaaata cggaccgcta
     4021 agtgaagacg gtacgcacta tcaatatgca gacataacac tttcaggagc accgacaaaa
     4081 gctggaacag gaagcattag ccttgaatat tacgacgggg caggtaacgg tggagtttac
     4141 agttattctg taaacacaaa atctaaaaca actatccaat atgtagatgg tgatggaaat
     4201 aaattagcag aggatacagt gaaaacgggt gatttaaata cagcctatac ctctgaacca
     4261 aaaacgattg atggatatga agtagacgaa acaaaacttc ctagcaatca aaatggtcag
     4321 tttgctgaaa caaatcagac agttacgtac atctactcaa aaacgaaaag tgaagtaaat
     4381 aaaggaacgg tcggtatttc attctatact cctgatggta gccgccggga acttaagtcc
     4441 tcattagact taagttatgc ctacccagat ggtgtcccaa cagacacagt aacattcggc
     4501 gatttagcaa aaaatacgac ttacaaagat ttaagaaata cgcctgatgc gcctactctt
     4561 ttatggaatg atttgttaca ttacatggta gactacatga acggcgatat agatgccgct
     4621 caatttgaag aggcagttgg gctaacacca gcgaattttg atttagattt tatttcacga
     4681 aatttcgaag gatataaatt tgatgaagca atgtatcaag aaaatctaag taaattagtc
     4741 acttttgagc aagatggcga tcaagttgat ttgcaagtac catttaagaa agtagaagtt
     4801 ggagcggata ttactgtaaa atacgttgac acagcaggaa acgaattagc atctgtagaa
     4861 acgttgagtg gtgatgtgga tgataactat acttcagaag caaaaacaat tgatggttgg
     4921 actttaaagg aaacacctaa taatgcaaca ggagtcttta gtaaagaggc acaaacggtt
     4981 acgtatgttt atgaaaaaaa tgaggataca gatgtcacac cggctcctga caattcagca
     5041 gatacaaatg atgacagtaa ctcatcagat aatactgcga caacagatga taatagtagt
     5101 agcgcagtga aagaaaaggc gcaaacacaa gcaagtagtc caaaggcagg aaaagtaacc
     5161 acacaagaga gcacttctaa caaagtaaca gcacaatcaa aagaatcact tcctaaaacg
     5221 ggagataacg tgttggaaag tagcttgtta gtgggcttgg gtatgctttt gttaggggga
     5281 ttatttgtat tccttcgtaa aactagaaaa gtaaaataaa aaaacgccca gtatttgagc
     5341 gatttcagac tgtagacaaa gtgagaaatc attttatcta cagtctgttt tttgaagtta
     5401 tttattaaac ttcatcatat gcttctaagg caacaggtag ggcgcttata acagtatttc
     5461 ctacagccgg tagaccaacg agaacggcgc taataatctc atcacgcgtc gcaccgtttg
     5521 tctttgccat tttcacatgg aaagggagcc cgctttctaa gcgagtggca gccataacag
     5581 caatgtatgc tagttcttct gtttttttat cgagtttact tgcggcatct agtttatgta
     5641 cggtttccat ccaggcagag tgtacttcgg gagcttcttt cgcgaacgct tcaaatgatt
     5701 tgcttacttt cattgaactc atctcctaac ttttattata ataaaaaacc gcccaaacag
     5761 tggacggttt tcgtattatc tattttctgc tttattataa gcgccatgcc aaacaggacc
     5821 gatgaattcg tttagtgcaa atccaccttt gatagctgca gtgacaaagt cttttgcttt
     5881 tgcgactgct tcttcaaccg ttaaaccttt tgcaagtcca gctgtgattg ctgctgcgaa
     5941 agtacagcca gcgccgtgat tgtggcttgg agagattttt tctacttcat agatagtaaa
     6001 ttctttgcca tcatatagta ggtcaattgc tttgtcgctt tctagggctt ttccgccttt
     6061 gataactacg tatttagcac ctaattcgat gatttttttc gctgcttttt tcatatcatc
     6121 taatgtagtt aatttgccaa gaccggataa ttgacctgct tcgaataggt ttggtgttgt
     6181 gattgttgct tttggaagca gtaggtcgcg gatagcttcc gcgttttctg gttggattaa
     6241 ttcgtcttcg cctttacaaa ccataacggg atcgattacg acatttttta aatcatattt
     6301 gtcgatggct tcgcgtgtag ctttaatgat gtcaattgaa ccgagcatac ctgttttcat
     6361 tgcgtcaaca ggaccaccag aaaggattgt tttaagttgt tcgcgaacaa gttgcgcatc
     6421 aattggagta acgccgtgcg cccagttgtt atctggatcc attgttacga ttgttgtgat
     6481 tgcgctaaaa ccataagtgc cgtattcttc aaacgttttt aaatcggctt gtaaaccagc
     6541 accgccactt gaatcagaac ctgcaatagt taatgttttt ttgattgtca tcgtgtttcc
     6601 tcctataaat aaactttagt catttgtttc taacatttta tagatggctg ctgcaacgcc
     6661 gtgctcatca ttcgaaaggg ttacgtgttc tgcaagatct ttgacttctt cttcgccgtt
     6721 acccatagct acactataac cagccatttt tagcatcgaa atatcattca tattatctcc
     6781 aattgcaaaa gtttcatcaa gtgttacgcc taatttttct acgtaatatt gtaaagaaat
     6841 acctttttgt gcttcgcggt gagtgatttc aatattatca gagaaagaag atgtaacgga
     6901 tagttcggaa tctttttcta gtttttgttt ggcttttgca agaatgtctt tatcagaaga
     6961 gaaggaaatg aattttagaa tggttaaatc tttattgcct aaaatacgtt ctacatctgg
     7021 aatttcgtga acgtccttcg attcaaaacg ttcttctact ttgtccataa tggtttctgc
     7081 gggaacgtct gggtggatgc gtttgtgcat ttcaatcata aattctttgc cacgagcttt
     7141 gtctgttgtg attgggccca tgtcagtgaa aaattcggta tacataccta attcagtcag
     7201 cgtgttgtaa gtgtttcttg ctaggtttct atcgatcgga tgttgcaaaa ttattttgcc
     7261 gtgttcatcg cggatttccg caccattcat acaaattgct ggtgcatata aattagcttt
     7321 attaattaac cccattgcat cgtcatacat acgtccggtg caaagaacga aatgaattcc
     7381 tttggcgcgg gctttttcga ttgcctcgac gttttcttgt gcaatctcga tatcagagtt
     7441 aagtagtgtg ccatccatgt ctgaagcaat aactttaatc ataatattaa attcctcccc
     7501 aattttacct actccactag aatatcattt ttttaagaaa aatgcacaaa aggtagctgc
     7561 gcgtagtttt ttaggtggag cgattacttt actatatttc tgtgattcat ttggttataa
     7621 tgaataagaa taaaacgtgg ataggatgtg tcaggatgaa aacagaacta gaaaagatga
     7681 ttgcaggaga aatgtatgat cctagcgaca gagagctcgc acacggaaga aatcgtgcac
     7741 gtaagttctg cagagagatt aacgatgcga tggattcaga gtcccgtgca agcgtgctga
     7801 agcgcctatt cggcggaaca aaagagaatg tatatgtgga acctgatttt cgtgttgatt
     7861 acggttctaa tatatatgta ggcgaaaatt tttatgctaa ttttgattgt gttattttag
     7921 atgtttgcga agtacatatt ggtgataatt gtatgatggc gcctggagtt catatttata
     7981 cggcaacgca tccgcttgat ccagtagaac gtaatagtgg gctagagctt ggtaaaccag
     8041 ttgaaattgg cgataatgtt tggattggtg gtcgggcaat tattaatcca ggggttaagc
     8101 ttggaaataa tgtcgtggtt gcttcaggcg cagttgtaac gaaaagcttc cccgataatg
     8161 tcgttcttgc cggcaaccca gcacgcgtta ttaaaacaat tgaggttgag gaaaaatgat
     8221 tattgcagat tcaaagattt ttgaacaaat ggaaaacgaa ttagcgaaag caaaagcagc
     8281 aaccacaaaa gcgagtcaag ataagcattt gcatggtttg atgctgcttg ttcagcttgc
     8341 aaaaacaggc gatgagacaa ctgcggctgt agaaccgatt gctattcagt cagcagaacc
     8401 ggcgcaaatt gcaagtatgg acgggaagaa aatagagtta gaagacggcg cgaatggaga
     8461 ctcgttgctt gatttttagg gggtaactat gaaaaaaaca attattacgg gagccatttt
     8521 tgcagggctg gcagttttac taggggcttt tggggcacat gctttaaaag acgtacttgg
     8581 aagttatgcg agtacttggg aaaccggcgt tcagtaccaa atgtttcacg caggaggcat
     8641 tttagttgta gggctattga tggaaaaaca agctagtcgg ctttacacat gggcagcgat
     8701 tttattttcg gtcggaattg tctttttctc gggtagtttg tatgtgttaa gtatttctaa
     8761 agtatccatt ttaggtgcga ttacgcctat cggtggtgtt tgctttgtcg ttggttggtt
     8821 cttgctaatt ttaggagtat caagaagaac gatgagtaga tattaaatca aaataatcgt
     8881 cttttcgcgt tcatttcagt gaaaagacga ttgttttttc ttattggcaa ataagtgcta
     8941 aaataaagga atcataattt ataaggagac agcaattaca tgacttatgc acttgaaata
     9001 aaagggttaa gaaaaattta ttccactggg gtcgaagcgt tgcgcggtgt ggatttaacg
     9061 gtagaagaag gagattttta tgcactgctt ggtcctaatg gtgccgggaa atcaacgacg
     9121 attggtatta ttacttcact agtcaataaa acatctggtc aagtaagcgt atttggctat
     9181 gatctcgata cagatatagt tcgagcaaaa cagcaaatcg gactagttcc gcaagagttt
     9241 aactttaatc cgttcgaaac ggttcagcaa atcgttgtta accaagctgg ctattacggt
     9301 gtttctcgta aggaagctat caaacgtagc gaaaaatatt taaaacaatc gaatttgtgg
     9361 gagaaacgga atgaacgtgc gcggatgctt tcgggcggga tgaaacgccg cttgatgatt
     9421 gcgcgggctc tcatgcatga accgaagctg cttattttag atgaaccgac tgctggtgtc
     9481 gacattgaac ttagacgtga gatgtggacg tttttaagag agttgaacga aagcggtacg
     9541 acgattattt tgacgacgca ttacttagaa gaagcagaga tgctttgtcg taatatcggt
     9601 attattcaat ctggggagtt aattgagaat accagcatga aatcactact ttctaaattg
     9661 caatttgaaa cgtttatttt tgatttagaa ccgtatgaag aagctttcga aattacgggt
     9721 tataatcatg tgtttgaaga taagcaaact ttgtctgtgg aagtggaacg taatcaggga
     9781 gttaaccata tctttgagca attaagcgaa cacggtatta aagtgctttc gatgcgtaat
     9841 aaatcgaatc gcctggaaga actattcttg aaaattacag aagaaaaaca tcaagtgggg
     9901 gagaaacatg tttaatctat attttacagc tttaaaaagt ctagcggcga aagaaacgaa
     9961 tcgctatatg cgaatttggg tacaaacact cgtgccgcca gttatcacga cttcgcttta
    10021 ttttattatt ttcgggaaaa tgattggtag ccgcattggg gaaatgaatg gcttttctta
    10081 tatggagtac attgtgccgg ggctgattat gatgtccgtc attactagtt cttacgccaa
    10141 tgtatcgtct tcctttttct cgcaaaagtt tcagaaaaac attgaagaaa ttcttgttgc
    10201 gccggtgcca acgcatatta ttatttgggg ctttttgatt ggtgggattg gtagaagtgt
    10261 tttagttgga gcacttgtca cgcttatttc gatggtgttt gtgccgattc acattcattc
    10321 gtggacgatt ggtattatta ccttcttaat gacggcgatt ttattttcac tcgcgggact
    10381 tattaacggg attttcgcta gatcatttga cgatgtatcc attgtcccaa cttttgtctt
    10441 acaaccgtta acgtatctag gcggcgtatt ctacgcgatt tcgatgttac cgccaatctg
    10501 gcaagcgatt tctaaagtga acccgattgt ctatatgatt tccggattcc gctacggttt
    10561 cctaggtgtt acagatgtac cagtagcaat ttctctatcc attcttgttg tatttagtgc
    10621 cgttctttac tcgatttgtt ggtatttaat tagtaaaggg cgaggacttc gaagttaata
    10681 gcgatttttt caaagagaga gcggatttcc gttctctttt tttcatgttt actacaattc
    10741 tttttcaatt tgatgttaaa cgttttagcg taaaactgga gggaagacat taagtaatgg
    10801 gggtagtgaa aatgggaaat aaaaaagtga agcgaaaact tggcgctaat atttggtgga
    10861 tacttatatt ggccatttta ataattttcg tagcctactt agtcatgggt tacgttgcaa
    10921 aaatatagga ggtttttatg atgaataaag aaaatccatt aaacaaatac catacaggaa
    10981 aatttgaaaa gcaacgccag gattatcctg gtttgcaaag taaaatgacg cctgttccag
    11041 atacgggcga atcaagttat caaggcgcga ataaattaac cgggaaaaaa gcctttgtaa
    11101 caggaggcga ctcgggaata ggtcgagctg cggtaattgc ctacgctcga gaaggtgctg
    11161 atgtcgcgat aaattatcat ccggatgaag aagtagatgc acaggaagtt aaagcgattg
    11221 ttgaggaagc tggacagaaa tgtgtcttat taccaggtga tttaagaaaa gaaggtttag
    11281 cgaaagattt agtaaaaaaa gcatataacg agttaggtgg actagatatt ctagtgctaa
    11341 acgctggact acagcaatat caattagata ttcaaaaact tccagctgaa caattacgtg
    11401 acacatttga agtgaacgtc ttctccgttg tgttcgcaat tcaagaagca cttaattact
    11461 taaaagcagg agcaagtatc attttaacgt cctccattca aggcgttaaa ccaagcgctc
    11521 accttgttga ctatgcaatg acaaaaagta gtttaatttc gcttactaaa agtttagcgg
    11581 cacaactagg ggaaaaaggt attcgaatta atgcggttgc accaggacca atttggacgg
    11641 cgctgcaaat ttctggggga caaccacaag atagtattcc tgcatttggt caagatcagc
    11701 cacttggacg agcagggcaa cccgcagaac ttgcgagcgc ttatgtgcta ctagcatcag
    11761 atgaagcaag ttatacaacg ggccaagtat acggaattac cggcggagct cctattaatt
    11821 aaaagcgagg tgaaagttcg tgccgtggac aaaaaatgat tatccggatt cgtggaaaaa
    11881 tctaagaaag accgaacgcg aaaaagctat tgaaatcggc aatgccctat taaaagatgg
    11941 ctactcagaa agccgcgcta tcccaattgc cacttcgaaa gcagaagaat ggtataaaaa
    12001 tcataaggaa tcgtaatgtt tagatgaaaa aatacttgga acgctaggct ttaagtctat
    12061 tgtttcaagt gttttaattt tgataaaaaa agtgtactat ttaaattaag agagatgatg
    12121 acaactagga ggaacttttt atgaataaaa gaagatggat tttcagcact gtggttgcag
    12181 ctttcctatt gattattgga ggatttttag tttatcaaca gatgacacca aaaccattca
    12241 ccgaagtagt ggcagaagct aaaatcgacg gttatgagag tggggatgaa ttagaaaacg
    12301 ctagtactgt catcgtaaca ggtcaactag aaaaacgcgg agattcaata atagagcgag
    12361 cttcagatga tgctgtgata ggtgtatata gaatgtctac ttttaaaata gcccaagttt
    12421 taaaaaacga aacggatgac aacttagcaa aagaaatgac aatatctgtt tatgaaaatg
    12481 aaggttacga tgccaaagcg aatacgacat accatatcgc tggctataca aaaatggaaa
    12541 aagaagaaaa atatctgttg ttgttgcaaa aagattcaga agatgactat tatgtcccga
    12601 cagcggttat tttcggaaaa ataaacctca atccgaataa acgaaatgaa ttatttccta
    12661 aaaatagcga cacagaatca gcaatcaata aagtacaagc cgaagtttta aaaaatcttg
    12721 aaaatgaaat tgagcgagag aataaataat tgtactctgt tgcattttag ttaaattcgt
    12781 catctaattt taatacaaaa aaagggtttg gattggggga gacgggtatt atataaccat
    12841 aagcaatgac aatgccatta ctttttctcc cttttttgta gtgggttgtc tttacttacc
    12901 ttaaactccc ttttatactt ttagcggttg ttagcagcca ctaagagtat ttttttgtaa
    12961 aaaacactaa ataaatgaaa actcctcgaa caagggaaag ttcgaggagt tcggcattta
    13021 ccaatattta taaatgccac tggggatttt ctaagtgaac aaagatatgg atgtttggga
    13081 gagcatccac ttggagaatt taccatagat agatagcgac aagttgtaat gtagtataaa
    13141 tcatacaatt cttgtagtgc atcatatata gcactgaatt attaaattcc tgataaacta
    13201 agaaaagact ggaataaaag tacctcatca agtatattta atttacgcgg gatttaaaga
    13261 ggtgatagaa ggttgagcaa ttttaacatc atgggatctt taatgcttat agctgtttta
    13321 gttttagcag tgtatgttat taccaaagtg attaccaaat taaaaaataa gtagagttta
    13381 actaaaatac ctcaataaca ttttggggta ttttatattt tagtgattat ttctcgcaat
    13441 catcaatggg tggattttgt gtaaagtttt attgctgata tgtattaaaa atctatagtt
    13501 tggaggtcta ataggtttaa aggcctgtga aaatagacac attttcaatt aaaaatagaa
    13561 atgtgtctat tttatgaatc tttattgtaa gagcttgtgt aatgggatgg ctacatatat
    13621 ccttatagat acggtgaaat ttatttacat aggaggaaat atgggatttt tagaagctta
    13681 caaatcattt tggagaaatt acgttaactt tagtggcaga gccccgagat cggcgtattg
    13741 gtatgtagta ctttggaatg ttattatttt tgtaatactt tatgctttag cttttatttt
    13801 tggtatttca gctattatgg aagcagctat gggtggtacg ggaatggctg gcggtggcgg
    13861 tgcaatcgtt ctggtaatca ttttatggct atacttgcta gcggctttac ttccaacaat
    13921 cagcttaatg gttcgacgct tacatgattc tggcaaaagt ggatttttcg tccttttaag
    13981 ccttattcca tttgctggcg gaattattat gttaattttt atgtgtcttg aaagtgatgg
    14041 accaaaccaa tatggtgatg gggatataga tagtaaattt gatttttaaa tagaaaacga
    14101 gctaagagat aatcctagct cgttttttta atggattcct tcgcttacaa ggaaccaatt
    14161 cacttggttg gtattaataa aatacgttaa gtcgtatttc gttaactcga tacatttttc
    14221 gttaaaaagg tttttcaagt ctgcttttga taattcgtgg atgctgatgt tgttgatttt
    14281 tgcgtcgtcg tcaaggcgaa tagattcccc atttacggta taaatttcga tatacatcgt
    14341 gccacccctt ctaaattaca tttgtttata attttctttg aatacaccaa gttgattcag
    14401 tgttacaacg agttgctggc tgaaaagtgg cagtgcttgg atttggtcta aatcactggc
    14461 ataagcgaaa tcagctactt gtaacacaag tgtatggaac gaatctgtca tggtttcgtt
    14521 ttgttgtttt aaataggaat tttcctgttc caattcttgg cattttgttt gtaagtcttg
    14581 gtattttttg tcgagttctt ctttttgaac agcaagggaa gagagtgagt aaatgctttt
    14641 tagtaagtca tatacgttgt tttcttcacc ttggttttcg cttaaaagtt gaacattgct
    14701 tttaacgccg gaaagtaaat caaccaagtt tttttcgcgt gatttgtcgt agctgatttg
    14761 ttctttgatg gacgttggtg ctttgaattc agctggcaca actttgccga aaatattggt
    14821 tttttctttt tttgtatttt tttgtgtttt tctttttctc ccaggcttgt ttttcggaat
    14881 atcttctact tggataagct ctttttttag tttgtagtaa gtattttgta gttggcttgg
    14941 agtctttgga aaaatccgca aatcatttag gctgagcatt tcagaaatat caagaacctt
    15001 catatcttct aaaatagcaa tttggtaaca tgcggaaagt agttctaatt cgatttttaa
    15061 ccaactaata ttggaatgca tatatttttc gattccaccg tgttcttcaa cggcttgata
    15121 aaattcagtg agtaaatggt agatttcttc ggcagttttt tcgtcaatgc cagcttctga
    15181 agccattttt ttaatttcag ttgtagatga attccccgga ttatctactt gttttttgat
    15241 ttcttgaagt aattttctta tttctgattt aggcatacaa tcacatacct ctctatccta
    15301 tagtattatt gattttctgt ttatttttat aataacaata tatgttagtt gtgtaaaggg
    15361 aacgcgagta ggtcaaaagg attgggtatg aagaaccttt tttcgagtta aatagaaaaa
    15421 tataaatcga ataatgagaa gttttccttt gatacagctg ttacactggc tgttttttta
    15481 tttttacaca aaatttcatt ttttaaaaaa agtatagatt ttttcaggat ttggtgtaaa
    15541 attttatatt gcagttacaa aaaacacttt attgatatat attttgaaaa aatgatttat
    15601 ttttgtaatc tgatgaaggg agtgaaaggt gaatttacct tacttgaatg gaatattttt
    15661 tatcactttt aaaaattatt gtacttttag cagtacttgc gggaatttct tattttttag
    15721 ttaagaaaaa caagcaagcg aatcgcacga gaaaaagcga aaatgatctt ataaagttga
    15781 aagacactct tttaatctct catcagttac gtgcagttct tctggaggca gacggggaaa
    15841 aggtgctggc gattatttcc aataatgata ttcgaacggt gtcattaaaa ggaaaaactg
    15901 accaaaatga agcacttttc cgagaattac ttttgaaaga ggagactaag gaaaatgcgt
    15961 aaaatagctt ctagacgagt atttcaagta tcttttattg ttatttttgc aatttcattg
    16021 gttgtctttt ggccaggggt gaatgtgcat gcagaaagtt ggctggactc acttggtgtg
    16081 aatgggacgg atggggttaa ttctagtgtg gcgctgtttg tactagttac ggttctttct
    16141 ttgtctgcat cgattgtatt aatgttcaca cactttactt actgtattat cgttcttggt
    16201 ttaacgaggc aagggcttgg cgcgacgaac ttgccgccca accaagtgct tgttggactg
    16261 gcactgtttt tatctttgtt tatgatgcaa ccacttatta ctgcttggta tgacgatgtg
    16321 tataaacctt cgcaaaaaga agagtggagc gcatcaaaag tatgggatga aacaaagccg
    16381 cttttgacaa aatatgtcgc ggaaaataca tataagcatg atattaacat gatgttgaaa
    16441 gcagaaggag aagatccagt tacaaaaaaa gaagatgctc cgcttatggc tttaatgcct
    16501 gcttttattt tgacacagat tacccaaggt tttttaactg ggatgtttat atacttagcg
    16561 tttattttta tagatttaat tgttagtacg ttactgatgt atcttgggat gatgatggta
    16621 ccgccgatga ccattagctt accgtttaag attcttgttt ttattttcat tggtgggtac
    16681 ggattgatta ccaacatgat ttttcaaaca attcactttt aagggagtag caaaatgaat
    16741 ttaacgccga ttacgcaaat ttttcaagat tttttctata gtgggctggc gcttattttg
    16801 ccggtgtcgc tcatttgtat cgtggtagtg attgtggtgg cgatattgat ggcaatgatg
    16861 caaattcaag accaatcgct gacgttttta ccgaagattg ttgctttcgt agtggcgcta
    16921 tttattcttg gaccgtggat gtttgaacac atgacggatt tgtttgtagg aatcttttcc
    16981 aaattacccc tgatgattag ggtgtaaaca tggagtttga atttttcctt gcggtagtga
    17041 ttgttttcag ccgagttgcc agttttttat tcttctttcc gcttttaaaa gggcgaaaca
    17101 ttccgaacag tgtcaaagtg gtttttggga tggcgatttc cattccagtg gcaacagggg
    17161 tcgatgtttc tggtataacg acgctaccag atttgctact ccgggtaacg tctgaagtgg
    17221 tttttggatt agcgctggcg aaattggtgg aaattattgc ggtaattcca aaaatggctg
    17281 gttttatgat tgattatgat ttaggatttt cgcaagtaaa cttgattgat ccttcttacg
    17341 ggacacaaaa ctcgattact gctgcgattt tagatacttt ctttgtagtg atatttttgt
    17401 cacttcaagg catggattac ttgatttatt atttaatgaa atcgtttgaa tttacggctt
    17461 cggtgtcgat tttatttgaa aaagggttta ttgatttgct gcttgggacg cttggttttg
    17521 cacttgcttc cgcggtgtcg attgcgctcc cgattatggg tagtattttt atcgttaata
    17581 tcattcttgc ttttatctct aagagcgctc cgcaaattaa catttttatg aatgc
//
LOCUS       DASDYO010000057        17476 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.057, whole genome shotgun sequence.
ACCESSION   DASDYO010000057 DASDYO010000000
VERSION     DASDYO010000057.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 17476)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17476)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17476
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.057"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..868)
                     /locus_tag="U0290_001588"
     CDS             complement(<1..868)
                     /locus_tag="U0290_001588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301632.1"
                     /translation="MIGKVKSISMWLWHHLTPQIFAVICVFIITLIALFVPPYIGMAD
                     NGDFFRIFSSNGLFVNNTNYDALQFGHFVKEFGIYQYFNENQVAIYSSQSIFIQMALL
                     LNKLFWSTTVFDVRFLGGLQLALLLPAIYLLVAGLTAKMKGWPGYVVAALTVFIFADT
                     AYTAYFNSFFSEGLILIMMLYISAGFLLLYQHKYNDYAMLGLIFVASLILITAKQQNA
                     PIAVVIAVCGILVFFIRKNRAFRISAAATFFVIFLSGVVMYAFIPGEFVTINQYQTMT
                     RGVLLDSENPEKS"
     gene            1098..1838
                     /locus_tag="U0290_001589"
     CDS             1098..1838
                     /locus_tag="U0290_001589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464054.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2301633.1"
                     /translation="MQIKELAELTGVSVRTLHHYDKIGLLVPQKDDWNGYRIYSENDV
                     DKLQQILFFKELDFPLKKIKQILDDPFFDKNVALDLQRHLLIEKKQRIETMLATLDQT
                     IRNEKGEITMTNKEKFTGFDFSTNPYEEEAKKRWGDKVVEKANEKVNNMSEKEKLTLK
                     ESFDAEFRHLASVRELAPESEEAQLAIDHFFHYLNDTHGNIYSLEAFAGLGEMYVADE
                     RFTKNIDQFGDGLSHFLKEAMNIYAKTK"
     gene            1977..3638
                     /locus_tag="U0290_001590"
     CDS             1977..3638
                     /locus_tag="U0290_001590"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464052.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEM2301634.1"
                     /translation="MFKHILLSLNGYKISYLRNDVISGVGVAALTIPVAMGYAQVAGL
                     PPIYGLYASFLPVIAYVIFASSPQLVFGIDATASAITGSIILGTAGLAAGSKEAIALA
                     PILAFFCAIFLVLFSVLKLGRFAKYISAPVLSGFISGLSVSIIMGQIPKIMGLKESGD
                     SFFSSLGIIFGQFFQSNWISFAMGVVTVIIVITCKKVIPKIPMSLVVLVLGTMAAYFF
                     KLDQYNVDIVGKIPVGFPSLALPDFGASSWALAIGGGLVCAIATFAGSLLPSESFAMR
                     NKYTIDDNRELFAYGISNFVAAFSGCSPASASVSRTAANEQFRGKTQMVSIVAATIIA
                     LIVAFLSGLLYYMPQPVLSGIVFAALVGIIDVDVLKGLFKVSRREATVWIVAALGTLL
                     VGVIFGVLLGIFLSFINVVSRSMKSPIAILGVIEGRHGYFDLKRKPEAKPIPNVVIYR
                     YSASLFFGNFNKFADGLKEAVQDDTKLVIFEASAIINIDTTATESMKDLLKWLDDKGI
                     EYYFADLIDHLKTSFRKHDLGYIIDNGYTKKTVEDALEAYYAEHK"
     gene            complement(3684..4127)
                     /locus_tag="U0290_001591"
     CDS             complement(3684..4127)
                     /locus_tag="U0290_001591"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464051.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301635.1"
                     /translation="MYSNRKEKVVFTLIMCSLMILCMSSYNIFLENGIGANSFLIILK
                     AFVPFLFIGFLLDFFVVGKIVYRLHALLVSEDASKFKKIIMMQLLMVTFMCVLMSTLS
                     LIVNQGEWSHLGILILRNYFVALFLQIFIVSPFVRLISPRIFALL"
     gene            complement(4234..4986)
                     /locus_tag="U0290_001592"
     CDS             complement(4234..4986)
                     /locus_tag="U0290_001592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2301636.1"
                     /translation="MLFLDKNLELNDTELDIYNYIVANLDKVVYMRIRDLATEAHVST
                     TTILRFCRKFGCNGFSEFRVKLQLYLEEQKLAQIDMADETTYIDFLKRTAQPEFKAQI
                     QNAVEILRDRELVLFAGVGSSGVIAEYGAIYFSSLFTLALHIEDPLNHPFYHLSSKLS
                     DKICMIAISVEGENEDIIRYIHQLKAQNCKVISITNSAKSTIARLSDANIAYYINKEM
                     YQEANITSQLPALYTIENIAREIRTQIDKEKM"
     gene            5188..6504
                     /locus_tag="U0290_001593"
     CDS             5188..6504
                     /locus_tag="U0290_001593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM2301637.1"
                     /translation="MTKGIKIATIGGGSSYTPELIEGFIKRQDELPVRELWLVDVEAG
                     REKLEIVGNLAKRMVEKAGVDMEVHLTLDREEALKDADFVTTQLRVGLLDARVKDERI
                     PNSYGVVGQETNGPGGMFKGLRTIPVILDICKDMERLCPDAWLINFANPAGMVTEAVL
                     RYSNQKKVVGLCNGPIGIERNIAETLGVDVSEIYVEFVGLNHMVFAKTVYHNGKDVTK
                     DVVFKMTEDEAGSSLKNINATGWDKTFLRTLNMIPIDYLRYYWQTKQQLEDQARAYAE
                     HGTRAEVVKKVEAELFELYKQEELAEKPKQLEQRGGAYYSEAACNLINSIYNDKRDIQ
                     IVNTRNNGAILDIDPDSAVETNCVITRQGPIPLASGRLPIAINGIIQEIKTFERLTAE
                     AAVTGDYDKALLAMTINPLTPSESVAREMLDELLEAHKEYLPNFFK"
     gene            complement(6537..7541)
                     /locus_tag="U0290_001594"
     CDS             complement(6537..7541)
                     /locus_tag="U0290_001594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family transcriptional regulator"
                     /protein_id="HEM2301638.1"
                     /translation="MAIPRDLKELNKKNIKSILRQQGAMTKAEIAEVTGLSVVTVNKL
                     IRDLVENEEILEQDNSVATGGRRAVSYEINPNFQQVLVISLQEKWKKITYSFSVYNLL
                     GEPEFVEDMSGEDLDITALKRNTKDLVCAFPKISCVVIGVPGIEIGGKLRAMDFPLLL
                     NVQLRETLEAEVNLPVLVETDTNAAILGYKNRPVKEENIVGLYYPERFPPGAGLLMNG
                     EILKGQNGLAGEIKHMPLQVDWDNFDFSVDEIKAHIRKMVLLTMSFYDPETIVLYTNF
                     YFGQKDFTEELTEELKQVYPYAVLPEIVLSRKFTTDYRIGLLAFGIDYLENNMTDWRI
                     "
     gene            complement(7672..9087)
                     /locus_tag="U0290_001595"
     CDS             complement(7672..9087)
                     /locus_tag="U0290_001595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter"
                     /protein_id="HEM2301639.1"
                     /translation="MQQEATGGQKIRPIPIIASFLMAGFIGLFSETALNMALSDLIQV
                     FDISSATVQWLTTGYLLTLGILVPISGLLLQWFTTRGLFFTAVSFSIAGTLIAALSPT
                     FAMLMIGRVVQAVGTALLLPLMFNTILLIFPEHKRGSAMGMIGLVIMFAPAVGPTISG
                     LILENLTWNWIFWISLPFLIIALLFGMKFMQNVSVVTKPKIDILSIILSTLGFGGVVF
                     AFSSAGESGWGSATVLVSIIVGGLALGLFVWRQLTMEKPLMDLKVFKYPMFTLGLILV
                     FISFMMILSTMILLPLYLQNSLALAAFSAGLVLLPGGVLNGLMSPFTGRLFDAYGPRA
                     LVIPGFIVAVVALFFLTRIEVGTSALTIIVLHSVLMIGISMVMMPAQTNGLNQLPPKL
                     YPDGTAIMNTLQQVSGAIGTAVAITIMSAGQKAYMETAQGVGPEQMVASLTAGIQNAF
                     VFGLIMACIGLLCSLFIRKAK"
     gene            9234..9602
                     /locus_tag="U0290_001596"
     CDS             9234..9602
                     /locus_tag="U0290_001596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1304 domain-containing protein"
                     /protein_id="HEM2301640.1"
                     /translation="MAILAFILTFIVMIEHIYIMILEMFFANTKLAAKTFGVEKELLA
                     NKKVQTLFANQGLYNGFLAAGLVWGLFFAGAGFAETVQIFFLSCVVVAALFGGATSSK
                     GILVKQGLPAVLALVAVLLV"
     gene            9883..10698
                     /locus_tag="U0290_001597"
     CDS             9883..10698
                     /locus_tag="U0290_001597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2301641.1"
                     /translation="MKKNIFKLMMALCAVLLIAGCGNSTSADKKETKETKEDGTVTFY
                     VVRHGKTMLNTTDRVQGWSDAVLTPAGEEVVKSAGKGLKDVDFSAAYSSDSGRAIQTA
                     NLILKESDKSADKEVQTDPRFREFNFGSYEGDLNENMWTDIAKSQGKTLEEWQKAGIS
                     PKDFADSVAALDKTRVKEGENWPAEDYATIQARLKEGLTDVAKKESKNGDSNVLLVSH
                     GLSIGALLDTIEPGYKLPAEGIKNASVTKITYKDGKFTIGDVNDLSYVEKGSK"
     gene            10819..12249
                     /locus_tag="U0290_001598"
     CDS             10819..12249
                     /locus_tag="U0290_001598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEM2301642.1"
                     /translation="MKRRTYVIITGLVLIFVAGAFWITNSTNQSDQKATQTEPLKKTS
                     PANVKTISSEAKKTLNSLASSGADKASISDLNQLIKELKSYPVEKNDSGAYLQNLTAC
                     LEAVKSYTTGKTDEKTLGKVYPAFLASEQKLSAIEKTNQYDWFYAAAATNQQGLKEKG
                     VVTLTMVGDNSFGTYPETPEHLKFDNVFQKNNGNNTYVYKNCLPWFKSDDYTVINAES
                     AFTNATKAENKKWRIKSDPAHVAFLPASGVEAANLANNHTMDYFQVGYDDTLKAFKEN
                     NIPVFNTDAPLETTIKGMKTVLLGYDCRMSQQSPAYLERIVKDVKKYKKENTLVIVNM
                     HWGVEYRETPTDYQSQFGHAILDAGADIIMGSHPHRLESVEKYKDKYIVYSMGDFAFG
                     ADPTLLSRMTSMFQLRFTKEDNKIVLKDISIVPTYENSDGSTTENNYQPLPVFGDDAK
                     KIVDELNRISKPIEGGVTEYTYFDPF"
     gene            complement(12296..12727)
                     /locus_tag="U0290_001599"
     CDS             complement(12296..12727)
                     /locus_tag="U0290_001599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="universal stress protein"
                     /protein_id="HEM2301643.1"
                     /translation="MEKYHRILVAVDGSEPAKLAFEKGLELALKLDGVLGIASIVDLR
                     AFSPNVSYDGSLEEKAELELKTSVNEYAEKARTAGVKQVETFVAKGNPKILLSTDIPA
                     EFQADLIICGATGMNRVEKLVLGSVSSYIMAHAICDTLIAR"
     gene            complement(12828..14657)
                     /locus_tag="U0290_001600"
     CDS             complement(12828..14657)
                     /locus_tag="U0290_001600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0514 family class 1 internalin"
                     /protein_id="HEM2301644.1"
                     /translation="MKKALKLFLATICMFIMIYPSTAAHAEETNIVNIPDANLKTYLN
                     GLLKQASDAPITKTQMNTIQTVTLSGSTYTDLTGLEEAGNLVTLSLNNTNIQTLEPIK
                     NQTSLTYLTVGGDNVKDSLFVDLNGLVNLQSLSISGSEVTHNVFKTFNKLPKLTYLYA
                     QNSMKITDISALASLPALTTLFLQFDGIDDFRPLNDFESFKNGNLKALAAFGQNTGRT
                     NPRITLKSGKLDYNETNQTLYLPFSMMPKPLTSFDGTVAPFSKSTSASNTYLGFNDVA
                     LPSARLSITDDGITVSGVTKEEFDNLDEIEYNARYDFPTGSYPTPPSMNSYTISSGTY
                     DQYFDISHTLDLTADESFDYNQYDATSEEQFLKDVHAETDDGTAVKSDFDQVVKLDVP
                     GEYTVTLNAENAAGLKATSVTVKVTVHEKPVITADSQISYKKESTKSVDEFLQEIHSS
                     VTGNAVLTSDFDKVVDLNTPGEYTVTLNAINDRGQKADPVTVVVTVTTSDGGHVNPVP
                     PTPEVKPTPQEETDPTIIPEPQSENSEDPVKENNAKTEEKANKTSLTTKENKVEKADK
                     AEKTNQPKTKALPQTGDTNKSTLPIAGVMLSLAALLIFRKSKS"
     gene            15039..15497
                     /locus_tag="U0290_001601"
     CDS             15039..15497
                     /locus_tag="U0290_001601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="winged helix-turn-helix transcriptional
                     regulator"
                     /protein_id="HEM2301645.1"
                     /translation="MNNEQNMNQQIALFYFGYKAFTETADLIIAKHSLKRLHHRILFF
                     TARMPGLTINELLTFLEISKQALHQPLAELKERELLTIEQGRRDKRQRCIFLTTAGKE
                     LENELGAAQRKQMAEIFANSSDTDGLHFTEVMEGYAKNRPGAALIKDFKE"
     gene            15504..15863
                     /locus_tag="U0290_001602"
     CDS             15504..15863
                     /locus_tag="U0290_001602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464040.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lin0512 family protein"
                     /protein_id="HEM2301646.1"
                     /translation="MEQILFIQTGFGVDVHGQNITKAAERAVRNAIFTNSMPGIQGLL
                     PDGDLQNMVVNIKLALPCDEEKLDEDTIRAIIPYGTVTIEKMAGGMMTTSGIFLEDKE
                     DKNDLMYIVNASVETGY"
     gene            complement(15888..16568)
                     /locus_tag="U0290_001603"
     CDS             complement(15888..16568)
                     /locus_tag="U0290_001603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HEM2301647.1"
                     /translation="MIIDVLQHVPHEGPGLIANWARENQHQLKIHSLFEENAHVPNDS
                     DFLIVLGGPMGINDTAEFPWLKDERKLIKRLSEQHKPVFGVCLGAQQIAATFGSEITV
                     NKEKEVGWFPVKRTSDKLSFFPESLNVFHWHQDTFALPAGATRLFASEGCLNQAFLYA
                     ENIIGLQFHFEMEKAGIETILQIDKAFITSGKYVQSVEVMREKDVPEDNKQMLEAILD
                     YLINPKTI"
     gene            complement(16675..17253)
                     /locus_tag="U0290_001604"
     CDS             complement(16675..17253)
                     /locus_tag="U0290_001604"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301648.1"
                     /translation="MKKILVPILLLATILASCSSPNEKITKDTKISKTITIRADYKIP
                     KDIKELEDNSANIVKVKFLQNKTIGKDGSTISEIEILTSYKGNLEKGSKVDISEPWYL
                     SDGKYVAVENYIALDKGQEYTIFLGEKDKDTYPLSSMGYGKFGGSLKEDQAVLADFNI
                     LGEVQKFDFISENTEEVKNYQLIKEQVAGKYK"
BASE COUNT         5584 a         3537 c         3066 g         5289 t
ORIGIN      
        1 gcgatttctc cggattttct gaatcaagta gcacaccgcg cgtcattgtt tggtactgat
       61 ttatcgttac aaactcccca ggaataaagg cgtacatcac aaccccactc aagaaaataa
      121 caaaaaaagt agccgctgct gaaatccgaa atgcacgatt tttccggatg aaaaacacga
      181 gtattccaca aaccgcaata acaaccgcaa tcggggcatt ttgctgtttt gccgtaatta
      241 aaataaggga tgccacaaaa atcaaaccta gcatcgcata atcattatat ttatgctgat
      301 ataaaagcaa aaatcccgcc gaaatataca gcatcataat caaaataagc ccttcactga
      361 aaaaggaatt aaagtaagca gtataagccg tatctgcgaa aataaatacc gtcagcgccg
      421 caaccacata acccggccag cctttcattt ttgccgttaa tcccgccact aacaaataaa
      481 tcgccggcaa aagaagcgct aattgcaagc cacctaaaaa acgcacatca aaaaccgttg
      541 ttgaccaaaa aagcttattt aaaagaagcg ccatttgaat aaaaatactt tgcgaagagt
      601 agatagctac ttggttttca ttaaagtact gataaatccc aaactccttc acaaaatgcc
      661 caaattgcag cgcgtcataa ttcgtattat tgacaaataa accattactc gagaagattc
      721 ggaaaaagtc tccattatca gccataccaa tatacggtgg cacaaaaagc gctatgagcg
      781 taataataaa aacacaaata accgcaaata tttgcggtgt taaatggtgc catagccaca
      841 tactaatgga tttaactttc cctatcatga tgctatcccc ttcttattta cgatagacca
      901 atgtcacaaa atagacacat ttacatttca ttatacgaga atgcccactt tttttccatg
      961 cttttattca ttttttttaa agaagttgac tacaactaat tttcttttcc actaaaaagg
     1021 ttataataaa cacaaattca agcttgacta tcacgcgacg tcatacttta tagtaaaagc
     1081 agaaggagga atcactcatg caaataaaag aattagctga actcactggt gtaagtgtgc
     1141 gcacactcca ccactacgat aaaataggcc tacttgtccc gcaaaaagat gactggaatg
     1201 gctatcgtat ttattcagaa aacgatgtcg acaaattaca acaaattctt ttctttaaag
     1261 aactcgattt ccctttgaaa aaaataaaac aaattcttga tgatcctttt ttcgataaaa
     1321 atgttgcttt agatttgcag cgtcacttac taatagaaaa aaagcagcgc attgaaacca
     1381 tgctagcaac cctcgaccag accatcagga atgaaaaagg agaaataaca atgacaaaca
     1441 aagaaaaatt cactggtttt gatttttcca ccaatccata cgaagaagaa gcaaaaaaac
     1501 gttggggcga taaagtagta gaaaaagcca atgaaaaagt aaataatatg agcgaaaaag
     1561 aaaaattaac tttaaaagaa agtttcgacg cagaatttcg tcatttagca tctgttcgag
     1621 aacttgctcc agagtcagaa gaagcccaac tcgctattga ccattttttc cattacttga
     1681 atgacaccca cggcaatatt tattccctag aagccttcgc tggtcttggg gaaatgtacg
     1741 ttgctgatga gcgcttcact aaaaatatcg atcagttcgg tgatggcctt tctcacttcc
     1801 tcaaagaagc catgaatatt tatgccaaaa ccaaataaaa aaagccacga tttcttaaaa
     1861 agagatcgtg gttttatgat tggtataaca aagaacgggg taaatagtat aagatttcat
     1921 taatatgtat ctatgatgta aaataaagaa taaaatacat ttcaagggag gaacttatgt
     1981 ttaaacacat cttgctttca ctaaatgggt acaaaatatc ctatttacga aatgatgtca
     2041 tttcaggcgt tggtgttgct gcactgacga ttccagttgc aatgggatat gcacaagtag
     2101 caggacttcc acccatttat ggattatatg catcattttt accggttatt gcgtatgtta
     2161 tttttgccag ttcaccacaa cttgttttcg gaattgatgc aacggcaagt gccatcacag
     2221 gatccatcat tttaggaaca gctggacttg ctgccggatc taaagaagct atcgcgctcg
     2281 ccccaattct cgcattcttt tgtgcaatat ttttagttct tttctccgta ttaaaattag
     2341 gacgtttcgc aaaatacata tcagccccgg ttcttagtgg attcatttcc ggacttagtg
     2401 tctccatcat tatggggcaa attcctaaga taatgggcct aaaagaaagc ggagatagtt
     2461 tcttctctag tctaggcatt attttcggac agtttttcca gtccaattgg atttcatttg
     2521 ccatgggcgt ggttacagtc attattgtta tcacttgtaa aaaagttata ccaaaaatcc
     2581 ctatgtctct tgtagtttta gtacttggga caatggctgc ttatttcttt aaattagatc
     2641 aatataatgt tgatattgta ggtaaaattc cagttggctt cccttcacta gcgctacccg
     2701 attttggtgc aagttcgtgg gcactcgcga ttggcggcgg tttagtatgt gccatcgcaa
     2761 cttttgccgg ttcgctttta ccaagtgaaa gttttgctat gaggaacaaa tatacgattg
     2821 atgataatcg tgagttattt gcttatggga tttctaattt cgtcgctgcg ttttctggtt
     2881 gttccccagc aagtgccagc gtatccagaa ctgctgctaa cgaacaattt cgtggtaaaa
     2941 cgcaaatggt ttctatcgtt gctgcgacca ttattgcgct aatcgttgcc ttcttaagtg
     3001 gcttacttta ctatatgccg caaccagttc tttcaggtat cgtatttgct gcccttgtag
     3061 gtattattga tgtagatgtg ttaaaaggtt tattcaaagt ttctcgtcgt gaagcaactg
     3121 tttggattgt tgcagcactt ggtacccttt tagttggcgt tattttcggg gtactacttg
     3181 ggattttcct atcattcatt aacgtagtaa gtcgttcgat gaaatcacca attgccattc
     3241 ttggagtgat cgaaggacgc cacggttatt tcgatttaaa acgtaaacca gaagcaaaac
     3301 caattccaaa tgttgtcatt tatcgttata gcgcttctct tttcttcggg aatttcaaca
     3361 aattcgcaga cggcttaaaa gaagcagttc aagatgatac aaaactagtc atttttgaag
     3421 cgagtgcgat tattaacatt gatacaaccg caaccgaatc tatgaaagac ttgctcaaat
     3481 ggcttgatga caaaggcatt gaatattact ttgctgacct aatcgaccat ttgaaaacca
     3541 gctttagaaa acatgatctt ggctatatta tcgataacgg ctacacgaag aaaaccgtgg
     3601 aagacgcgct cgaggcttat tatgccgaac ataaataaca aaacgcttag ccgggcctaa
     3661 actcgactaa gcgtttttca tttttacaaa agcgcaaaaa tccgcggact aattaaccgc
     3721 acaaacggtg acacgataaa aatttgcaaa aataaagcca caaaataatt gcgcaaaata
     3781 agaataccta gatgactcca ttcgccttgg ttcacaatca ggctaagcgt cgacataagc
     3841 acacacataa atgtaaccat caacaattgc atcataatga tctttttaaa tttcgaagca
     3901 tcttcactaa ccaaaagggc gtgtagacga tacacaattt ttccgacaac aaaaaagtct
     3961 aataaaaatc caataaaaag aaacgggaca aatgctttta aaataatcaa aaaggaattc
     4021 gcgccaatac cattttcaag aaagatatta taagagctca tgcataaaat catcaaagaa
     4081 cacataataa gtgtaaaaac gaccttctct ttcctattac tgtacataat ttcacctcca
     4141 aagaactatc gtagcaaatt aaaaaattct tcgtaagtga caattttgtt acaaaaaaag
     4201 ttttgctcgg aaatccaagc aaaacgtagc tttttacatt ttctctttat caatttgcgt
     4261 tcttatttcc cgggcaatat tttcaattgt atatagcgcc ggtagttggg acgtgatatt
     4321 cgcttcctgg tacatttcct tattaatata ataagcgatg ttcgcgtcag atagccttgc
     4381 aattgttgat ttcgcgctat tcgtaatcga aattacttta caattttgcg ctttcagttg
     4441 gtgaatgtag cgaatgatgt cttcattttc cccttccacc gaaatcgcaa tcatacagat
     4501 tttatcggat aatttgctcg ataaatggta aaacgggtgg ttaagcggat cttcaatatg
     4561 tagcgccagc gtaaataatg acgaaaaata aatcgcgcca tattcagcaa ttacacccga
     4621 tgaacccacc ccagcaaata aaaccagttc gcgatcacga agaatctcga ccgcgttttg
     4681 aatttgcgct ttaaactcag gttgcgccgt ccgttttaga aaatcaatat aagtcgtttc
     4741 atccgccata tcaatttgcg ccaacttctg ctcttccaaa taaagctgta atttcacccg
     4801 aaactccgaa aaaccattac aaccaaattt tcggcaaaaa cgtagaattg tcgtcgtact
     4861 cacatgcgct tccgtcgcca aatcgcgaat ccgcatataa acaactttat ctaaattcgc
     4921 cacaatataa ttataaatat ctaattccgt atcatttaat tccaaatttt tatccaaaaa
     4981 aagcattttc gcacctcttt tcgctttatt ttaccatgta acacctcgtt actcaaatgt
     5041 gacaagttcc tacttagaaa atccttacct aaacctcgtc aaatactagc tattttttca
     5101 taaaattcct atactataac tgtgagaaga aaaggtgata ccaaataagt aagccttttc
     5161 aaaaaaatat ccttggaggt ataaataatg actaaaggta ttaaaatcgc aactattggt
     5221 ggcggatcaa gttatacacc tgaactaatc gaaggattta ttaaacgtca agacgaatta
     5281 ccagttcgtg aactatggtt agtcgacgta gaagctggcc gtgaaaaatt agaaatcgtt
     5341 ggtaatttag caaaacgtat ggtagaaaaa gctggcgttg acatggaagt acatttaaca
     5401 ctagaccgtg aagaagcttt aaaagatgct gatttcgtaa caacacaatt acgtgtaggt
     5461 ttactagatg cacgtgtgaa agatgagcgc atcccgaatt catatggcgt tgttggtcaa
     5521 gaaacaaacg gaccaggcgg catgttcaaa ggacttcgca caatcccagt tattttagat
     5581 atttgtaaag acatggaacg cctttgccca gatgcttggt taatcaactt tgctaaccct
     5641 gcaggaatgg taacagaagc agttcttcgt tacagtaacc aaaagaaagt tgttggctta
     5701 tgtaatggcc ctatcggcat cgaacgcaat atcgctgaaa ctcttggcgt agacgtttct
     5761 gaaatttacg tagaattcgt tggtctaaat cacatggtat tcgcgaaaac tgtttatcat
     5821 aatggcaaag acgtaacaaa agatgttgtt ttcaaaatga cagaagatga agctggctca
     5881 agccttaaaa atatcaatgc aactggttgg gacaaaacgt tcttacgtac actaaacatg
     5941 attccaatcg actacttgcg ctactactgg caaacaaaac aacaactaga agaccaagct
     6001 cgcgcatacg cagaacatgg tactcgtgca gaagttgtta aaaaagtaga agccgaactt
     6061 ttcgagcttt acaaacaaga agaacttgct gaaaaaccaa aacaattaga acaacgcggc
     6121 ggcgcttact acagcgaagc agcatgtaac ctaattaact ctatctacaa cgacaaacgc
     6181 gacattcaaa tcgttaatac tcgtaacaat ggtgccatcc ttgatatcga ccctgattcc
     6241 gcagtagaaa caaactgtgt tatcactcgc caaggcccaa ttccactagc aagcggacgt
     6301 cttccaatcg ctatcaacgg catcatccaa gaaatcaaaa ctttcgagcg cctaacagcc
     6361 gaagcagcag ttactggtga ttacgacaaa gcactacttg caatgacaat caacccacta
     6421 actccaagcg aatctgtagc ccgcgaaatg ctggatgaac ttttagaagc gcataaagag
     6481 tatttaccga atttctttaa ataagtaaaa aaagagcctg tcaaagggct ctttttttat
     6541 atccgccaat ccgtcatatt attctccaaa taatcaatcc caaacgccaa aagcccaatc
     6601 cgataatccg tcgtaaactt acgcgacaac acaatctccg gcaaaaccgc atatggataa
     6661 acttgcttta actcttccgt cagttcctcg gtgaaatcct tctgcccaaa ataaaaattt
     6721 gtatagagca caatcgtttc cggatcataa aaactcatcg ttagcagcac cattttacga
     6781 atgtgcgctt taatttcatc gacagaaaaa tcaaagttat cccagtccac ttgaagcggc
     6841 atatgcttaa tctccccagc cagcccattt tgacctttca aaatctctcc gttcatcaaa
     6901 agccctgcac ccggtggaaa acgctccgga taataaagtc caacgatatt ctcctctttc
     6961 accggccgat ttttataccc taaaattgcc gcattcgtat ccgtctcaac caacaccggt
     7021 aaattcactt ccgcctccaa agtctcacgc aattgcacat ttaaaagtag cggaaagtcc
     7081 atcgcacgta acttaccgcc tatttcaatt cccggcaccc cgattacaac acaagaaatc
     7141 ttcggaaaag cgcaaacaag atctttcgta ttccgtttca gcgcagtaat gtccaaatcc
     7201 tccccagaca tatcctccac aaactccggc tcaccaagca aattatagac cgaaaaagaa
     7261 taagtaattt tcttccactt ttcttgcaaa ctaataacca acacctgctg aaaattagga
     7321 ttaatttcat acgaaacagc tcttcttccg ccagtcgcaa ccgaattatc ttgttctaaa
     7381 atctcttcat tttccactaa atcacgaatc agcttgttca ctgtaactac acttagccca
     7441 gtcacttcgg cgatttccgc tttcgtcatc gcaccttgtt gccgtaaaat cgacttgata
     7501 tttttcttat tcaattcttt taaatcacga ggaattgcca tcatcaacca ctccattcgt
     7561 aaagttatta aacaaacttt ataaactata tttactatca ttttaaccac tcagaaccca
     7621 tttgtcaaaa caaaaaagaa cctctcatta cgagaagttc tcttcgcttt attatttagc
     7681 tttacgaata aataacgagc acagaagacc aatacaagcc ataatcagtc caaagacaaa
     7741 ggcattttga attcctgctg taagagaagc aaccatttgc tccggtccta ctccttgcgc
     7801 cgtttccata taagcttttt gtccagctga catgatcgta atcgcaacag ccgttccaat
     7861 cgcgccggaa acttgttgca acgtgttcat aatcgccgtg ccatcaggat ataattttgg
     7921 tggtaattgg tttaatccgt ttgtttgtgc cggcatcatg accattgaaa tcccaatcat
     7981 taacaccgaa tgaagcacga tgatggttaa tgcagatgtt ccaacttcta ttctcgttaa
     8041 gaaaaatagt gccacaactg ctacgataaa ccctgggata acaagtgcgc gtggaccgta
     8101 tgcatcgaac aaacgcccag taaatggtga cattaaacca ttcagcaccc cacccggaag
     8161 taatactaat cccgctgaaa atgctgcgag cgctaaacta ttttgcaagt atagcggtag
     8221 taaaatcatc gttgaaagaa tcatcataaa gctgataaat actaaaataa gtcctaatgt
     8281 gaacattggg tatttaaata ctttcaagtc catcaaaggt ttttccattg ttagttggcg
     8341 ccaaacaaag agtccaagcg caagtccacc aacgataatt gaaactaata ccgttgcgct
     8401 tccccaacca ctttctcccg cactactaaa ggcaaataca actccaccaa aacctagcgt
     8461 cgaaagaata atcgataaaa tatcaatttt cggcttcgta acaaccgaaa cattttgcat
     8521 aaatttcatt ccgaataata acgcaataat aaggaatggc aaggaaatcc agaaaatcca
     8581 gttccaagtt aagttttcta aaattagtcc tgaaattgtc ggaccaactg ctggagcaaa
     8641 cataattacc agcccgatca tccccattgc tgagccacgt ttatgctctg ggaaaatcag
     8701 taaaatcgtg ttaaacatta atggtagtaa tagcgccgta cctactgctt gcactacacg
     8761 cccaatcatt aacattgcaa acgttggcga aagcgccgca atcagcgtac cagcaatcga
     8821 aaaactcact gctgtaaaaa ataaacctcg tgttgtaaac cattgtaaaa gtaatcccga
     8881 aatcggtact aatattccaa gcgttagcaa ataacctgtc gtaagccact gcactgtcgc
     8941 tgaactaata tcaaacacct gaatcaaatc actaagcgcc atgttaagag cagtttcact
     9001 gaatagccca atgaaccccg ccatcaaaaa tgaggcaata atcggtatcg gccgaatttt
     9061 ctgcccacct gttgcttctt gttgcatata gtttccccct tttcagacta aaaattaagt
     9121 agtctacgtt tgatattacg gagatttcgc caataagtca acgtttcaag ctctattttt
     9181 acgaaaaatt tacaagctat gctatacttc gaagtagaaa agagggattt tttatggcca
     9241 ttttagcatt tattttaacc ttcatcgtaa tgatcgagca tatttatata atgattttag
     9301 aaatgttttt cgccaatacc aaactcgcag ccaagacatt tggcgtggag aaggaattac
     9361 ttgcgaataa aaaagtacag acgctgtttg cgaatcaagg gctttataat ggctttcttg
     9421 cggcagggct tgtgtgggga ttgtttttcg cgggagcagg atttgcggag actgtgcaga
     9481 ttttcttttt gagttgtgtg gttgtggcgg cgctgtttgg cggagcgact tcttctaagg
     9541 ggattttggt gaaacagggc ttgccggcgg ttttggcgtt ggttgcggtt ttgttggttt
     9601 aggtgttgca ggaaaaggct tggattaaat ctgagccttt ttataatgga aattgaatta
     9661 gcgtttcaaa caaataattt acttattttt ccaattttta tcaaaaacag acttgtaaac
     9721 gctttccatc catgctaaaa tcgtcctata aacaaatatc cttattcagg aatgttacca
     9781 acttgggcat aacctagata aatggagaat tggctttttg ggctagtttt cgatttatct
     9841 aggtttttat tttgctaaat actaacaaaa aaggagaaca agatgaagaa aaatattttt
     9901 aaattgatga tggcgttatg cgcagtacta ttaattgcag gttgcggtaa cagtacatct
     9961 gcagacaaga aagagacaaa agaaactaaa gaagatggca ctgtgacatt ttatgtagta
    10021 cgtcatggta aaacaatgct aaacacaact gaccgtgtac aaggttggtc tgatgcggtt
    10081 cttactcccg ctggtgaaga agtagttaaa agcgctggta aaggcttaaa agacgttgat
    10141 ttctctgcag cttacagcag cgacagtggt cgtgctatcc aaactgcaaa cttaattttg
    10201 aaagaaagcg ataaatccgc tgataaagaa gtacaaactg atccacgttt ccgtgaattc
    10261 aattttggtt cttatgaagg cgatttaaat gaaaatatgt ggactgatat tgcgaaaagc
    10321 caaggtaaaa ctttagaaga gtggcaaaaa gctggtatct cgccaaaaga ttttgctgat
    10381 agtgtagcag ctcttgataa aactcgtgtg aaagaaggcg aaaactggcc tgctgaagac
    10441 tatgcaacta tccaagctcg tctaaaagaa ggtttaacag atgttgctaa aaaagaaagc
    10501 aaaaatggcg atagcaatgt attactagtt tcccacggac taagcatcgg tgcgcttctt
    10561 gatactatcg aaccaggata caaactgcct gcagaaggta tcaaaaatgc aagtgtaaca
    10621 aaaatcactt acaaagatgg taaattcact attggtgatg taaatgactt aagctatgtg
    10681 gaaaaaggtt ctaaataaat agccagacaa aaagcccaaa acaatttatt ttgggctttt
    10741 gttttactaa atatagactt gtgtttcttc cttacaatta ctatacttag aaaaaaagga
    10801 actacggagg atatctagtt gaagagacgt acctatgtta ttattactgg tttagtactt
    10861 atttttgtcg ctggtgcttt ttggattaca aattctacta atcaatctga ccaaaaagcc
    10921 actcaaaccg agccactaaa aaaaacaagt ccagctaatg ttaaaaccat ttcatcagaa
    10981 gctaagaaaa ccttgaattc cctagcaagt tcaggagctg acaaagcttc tatttccgat
    11041 ttaaatcaat taattaaaga actaaaatcc tatccagttg aaaaaaatga ttctggcgcc
    11101 tatctccaaa atctcacagc ctgtttagaa gctgtaaaat cgtatacgac cggcaaaaca
    11161 gatgaaaaaa cgcttgggaa agtatatcct gcttttcttg caagtgaaca aaaactatca
    11221 gccatcgaaa aaacaaatca atatgattgg ttttatgccg cagccgcaac caatcaacaa
    11281 ggtttgaaag aaaaaggtgt tgtcactttg accatggttg gcgataattc atttggaacc
    11341 tatcctgaaa cgcccgaaca cctcaaattc gataacgtat tccaaaaaaa caacggcaat
    11401 aatacctatg tttataaaaa ctgccttcct tggtttaaat ctgatgacta cactgtcatt
    11461 aacgctgaaa gtgcctttac gaatgcaaca aaagcagaaa ataaaaaatg gcgcatcaaa
    11521 agtgaccctg cacacgtcgc ctttttacca gcgagcggtg tagaagcagc aaatttggcc
    11581 aataaccata caatggatta cttccaagtt ggttacgatg acacattaaa ggcttttaaa
    11641 gagaataata ttcctgtttt caataccgac gctccacttg aaacaaccat taaagggatg
    11701 aaaactgttc tactaggcta cgattgccgt atgagtcagc aatctcctgc ttatcttgaa
    11761 agaattgtaa aagacgtgaa gaaatacaaa aaagaaaata ctctcgttat cgttaatatg
    11821 cactggggcg tcgaatatcg cgaaacacca acggattatc aaagccaatt tggtcatgcg
    11881 attttagatg ctggtgctga tataattatg ggctctcacc ctcatcgcct agaaagcgtt
    11941 gaaaaatata aagataaata catcgtttat agcatgggcg actttgcttt tggagctgat
    12001 cctacgctac tttcccgtat gacatcgatg ttccaactgc gctttacgaa ggaagataat
    12061 aaaatcgttc taaaagatat ttctatcgtt ccaacttatg aaaattcaga tggtagtacg
    12121 acagaaaaca attatcaacc gctccctgtg tttggtgatg atgctaaaaa aatcgtcgat
    12181 gaacttaacc gtattagtaa acctatcgag ggcggcgtaa cagaatacac ttacttcgat
    12241 ccgttttgat aataaaaagc gtagatatct tctaacaaag atatctacgc tttttttatc
    12301 tagctattaa agtatcgcaa attgcatgag ccataatata agaagaaaca ctaccaagaa
    12361 ctagcttttc tactcggttc atcccagtcg ctccgcaaat aattaaatct gcttggaact
    12421 ctgctggaat gtctgtggaa agtaagattt tcggattacc tttagcaaca aaagtttcta
    12481 cttgtttcac tcctgccgtt ctagcttttt ctgcgtattc attaacgctc gtttttaatt
    12541 ctagttcggc tttttcttct aagctgccat cataagaaac attcggggaa aaggcacgta
    12601 aatcgacaat actagcaatt ccaagcacac cgtctaattt tagcgctagt tccagtcctt
    12661 tttcaaaggc taattttgct ggttcagaac catccactgc tacaagaatg cgatgatatt
    12721 tttccatcat ataaaacctc ctacaacttt tcttatagta ttccataccc tataaaaatg
    12781 attttaggcc tgccattcat tctttttgct aatgaattca caataactta agatttgctt
    12841 tttctgaaaa tcagcagtgc cgctaaactc agcattactc ctgcgattgg taaggtgctc
    12901 ttattagtat caccagtttg tggcaaagct tttgttttcg gttgatttgt tttttctgct
    12961 ttatctgctt tttctacttt gttttctttc gttgttaaag aagttttatt tgctttttct
    13021 tctgtttttg cattattttc tttcactggg tcttctgaat tttcgctttg aggttctggg
    13081 atgattgttg ggtcggtttc ttcttgaggt gtgggtttta cttctggtgt tggtggaacc
    13141 ggattaacat gtccgccgtc gctagtagtc acagtcacaa ctacggttac agggtcagct
    13201 ttttggccgc gatcatttat tgcatttaaa gttacggtgt attcgcctgg ggtgtttaaa
    13261 tctactactt tatcaaaatc actggttaaa actgcatttc cagttaccga actatggatt
    13321 tcttgcaaaa attcgtcgac tgatttagtt gattcttttt tataagaaat ttgggaatcg
    13381 gctgtaataa ctggtttttc atgaacggtt actttaactg ttacggaagt tgcttttagt
    13441 cctgcagcgt tttccgcatt taatgtcacg gtatattcac ccggtacatc aagcttaact
    13501 acttgatcaa aatcgctctt tactgctgtg ccatcatctg tttcagcatg tacatctttt
    13561 aaaaattgtt cttctgatgt tgcatcgtat tgattatagt caaaactttc atccgccgtt
    13621 aaatctagcg tgtggctaat atcaaaatat tgatcatatg tcccgctgga aatggtataa
    13681 gaattcatgc ttggtggtgt cgggtaactt ccagtcggaa aatcatagcg tgcattatat
    13741 tcaatttcat caagattgtc gaattcttct tttgttacac cgctgactgt aataccatca
    13801 tcggtaatgg atagacgtgc gcttgggagt gccacatcat taaatcctaa ataagtatta
    13861 cttgcggaag tcgatttaga aaatggtgca acagtgccat caaaactcgt taaaggtttt
    13921 ggcatcatcg aaaatggtaa atataacgtt tggtttgttt cattataatc taacttacca
    13981 gatttaagtg taattcttgg attcgtgcgc cctgtatttt gcccaaaagc agcaagagct
    14041 ttcaagttgc catttttaaa actttcaaag tcatttaaag gtctaaaatc atcaatgcca
    14101 tcaaattgta agaatagtgt cgttaaggct ggtaaggaag caagcgcaga aatatctgtg
    14161 attttcatgg agttttgcgc ataaagataa gttaactttg gcaacttatt gaaagtctta
    14221 aagacattat gtgtcacttc gcttccgctg atactaagac tttgtaaatt aacaagtcca
    14281 tttaaatcta cgaaaagact atcttttaca ttgtctccgc ccactgttaa gtaagtcaaa
    14341 gaagtttggt ttttaatcgg ttcaagtgtt tggatgttag tattgttaag agatagtgtt
    14401 accagatttc cagcttcctc caaacccgtc aagtctgtat aagtgctgcc agaaagtgta
    14461 acggtttgga tagtgttcat ttgtgtttta gtaattggtg catcacttgc ttgcttgagc
    14521 agaccattaa gataggtttt aagatttgca tcaggaatat taacaatatt cgtttcttct
    14581 gcgtgagctg ctgtggaagg atatatcatt atgaacatac aaatcgtcgc aagaaatagt
    14641 ttcagtgctt ttttcattta tactctcctt agtggttaat ttcttcccaa agtataaccg
    14701 cgttaaaact aactctcaat acgttttcat aaaatatttc acgtttgatt tgccttaata
    14761 ttcatattat tcactcttat ttttatagga atcgctttaa ataaacaatg gtagcgcttt
    14821 tttgtctaaa taaaagaaat ctgaaaatta tatcaacgta acattttgta cacaattaac
    14881 tgttttcaaa tactaatatt atacattaga tgttttgttt agcagaaaat atcttcttaa
    14941 taatgcgaaa aagcttctaa aaaagtgatg cgctaactgt tattgtgtcc ccttatttat
    15001 gctatactgt tgatattgac agaaaaaggg gtatatttat gaacaatgag caaaacatga
    15061 atcaacaaat cgctttattt tactttggtt ataaagcatt tacagagacc gctgatttga
    15121 ttattgccaa acattcactc aaaagattgc atcatcgtat tttatttttc acggcgcgga
    15181 tgcctggact tacaattaat gaacttttaa cttttttaga aatatcaaaa caggccctac
    15241 accagccact cgctgaactg aaagagcgcg aacttctcac gatcgagcaa ggtagacgcg
    15301 acaaacgcca acgctgcatc ttcctaacta cagcaggcaa agaattagaa aatgaacttg
    15361 gtgccgcaca acgtaagcaa atggcagaaa tattcgccaa ttcctccgat actgacggat
    15421 tacatttcac tgaagttatg gaaggatatg cgaaaaaccg accaggcgcc gctttgataa
    15481 aagattttaa ggagtgattt atgatggaac aaattctatt tatccaaact ggctttggcg
    15541 ttgatgttca cggccaaaat attacaaaag cagccgaacg agctgtaaga aatgcgattt
    15601 ttacgaactc tatgcccggt attcaagggc ttcttccaga tggcgactta caaaacatgg
    15661 ttgttaatat caaattggcg ctaccgtgtg atgaagaaaa acttgacgaa gataccattc
    15721 gcgcgattat cccttatggc actgtaacta ttgagaaaat ggctggcgga atgatgacta
    15781 caagcggcat tttcttagaa gacaaagaag acaaaaacga tttaatgtat atcgtcaacg
    15841 cttctgttga aactggatac taaagaaaaa accatctgac tttctcgtca gatggttttt
    15901 ggatttatta aataatctaa aatagcctca agcatttgtt tattatcttc tggaacatcc
    15961 ttctctcgca tcacttccac gctttgaaca tattttccag atgtgataaa cgccttatca
    16021 atttgcaaaa tcgtctcaat ccccgctttt tccatttcaa aatgaaactg taaaccgata
    16081 atattttcag cgtacaaaaa agcttggttc aaacaaccct cactagcaaa taaacgcgtg
    16141 gcgccagctg gtaacgcaaa cgtatcttga tgccagtgaa acacatttaa tgattctggg
    16201 aaaaatgata atttgtcgga agttcttttg acaggaaacc agcctacttc tttttcttta
    16261 tttacagtga tttcgcttcc gaatgttgct gcgatttgtt gtgcgccgag gcagacacca
    16321 aaaacaggtt tatgctgttc acttaatcgc tttattagct tacgttcgtc ttttaaccac
    16381 ggaaattcgg ctgtatcatt tattcccatg ggtcctccaa gtacaattaa aaaatccgag
    16441 tcatttggaa catgagcatt ttcttcaaat agagaatgta tttttaactg atgctggttt
    16501 tctctcgccc aattcgctat aagtccaggt ccttcgtgcg gcacatgttg caatacatca
    16561 ataatcaatt gatcagctcc tgtcattttt ttctattatg accgaattct aaggtttgtg
    16621 caactgagat ttctctaaaa aacacctggt tattaatcag gtgtttaagt ttactcattt
    16681 atatttccct gcgacttgct ctttaattaa ttgataattt tttacttcct cagtattttc
    16741 tgagataaaa tcaaattttt gcacttctcc aagaatgttg aaatctgcta gaacagcttg
    16801 gtcctctttt aaacttccac caaatttacc ataacccata ctactaagag gatatgtatc
    16861 tttatctttt tctccaagaa aaatggtata ttcttgtccc ttatctaatg caatatagtt
    16921 ttcaacagcg acatatttac catcgcttaa ataccacggt tctgaaatat ctactttact
    16981 ccctttttct aggtttcctt tgtaactagt caaaatttct atctcgctaa tagtactacc
    17041 atccttgcct atcgttttat tttgaagaaa tttcacttta acaatattag cactattatc
    17101 ctcaagttct ttaatatctt ttggaatttt gtaatctgct cttattgtga tagtcttgga
    17161 tattttagtg tctttggtta ttttttcatt cggcgaggaa cagcttgcta agattgttgc
    17221 taacaataat atgggcacta gaatcttttt caatagtaga gtcctcctta tatgtattat
    17281 tcagcttacc ttcccttaaa ttttagcata ggtagattat gttttatagt acaatccata
    17341 gtgaaaaaac ggctttttat tgcgtttatt gctaaattgt taacagattg ctcgtttgac
    17401 tataattatt cacaaaaaaa caaaaccaat taatgagggt tttgttttta ggaatttatt
    17461 tgcaaggaat aattat
//
LOCUS       DASDYO010000058        17337 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.058, whole genome shotgun sequence.
ACCESSION   DASDYO010000058 DASDYO010000000
VERSION     DASDYO010000058.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 17337)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17337)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17337
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.058"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..995)
                     /locus_tag="U0290_001605"
     CDS             complement(<1..995)
                     /locus_tag="U0290_001605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2301649.1"
                     /translation="MLLTKSEHALINLFLTKNDFLTAKQLAEILDVSSKTIYRKIKNI
                     NETTGRKDIIISEKGRGFKLDYKAYIQAKLETTGDIFGYTPTERREKILLQVLFKSPK
                     YLNVTELYEDYYVGYNSIKNDFSLLNQAIEKYDLALEKRQKEIRVVGTEENIRTAINE
                     VINNLDLSTYDDLKTEYSDLNKADVQFIVRQMELIENKLMISIPYPYDINIFSHLYIL
                     INRFRQGEVEDFKESDDAYIVTNEKLHTIAVEAIDAIEQYLKMKLPERETFHFLQYLI
                     SSRFNHEIELVPGKILPIVEEMTDFYIEQVAAKINMPINKKQLKIELLSHMKPMV"
     gene            1191..2093
                     /locus_tag="U0290_001606"
     CDS             1191..2093
                     /locus_tag="U0290_001606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301650.1"
                     /translation="MTLELHNVTKKFGTKVAVNDLSFRVEPGKILGLIGQNGAGKTTT
                     FRLILHFLEATSGKITWDGKEVSKIDPNIIGYLPEERGLYPNVTIEEQLIFFAELKGY
                     PKQKIKAEIDSWLERAEIVGKKTDLIKTLSKGNQQKIQLLSTIIHQPKLVILDEPFSG
                     LDPVNAEILKKFVFDLRASGAAIIFSSHRMENVEELCDSLLMLKKGNVVLQGTTESVK
                     AVFGRKRILIESSHSAAELATLPGVLNVQTHRDGVLQLEIENESDAEKIFEYVTKDGF
                     IQTFSLQAPTLEEIFKWKAGELNE"
     gene            2086..3321
                     /locus_tag="U0290_001607"
     CDS             2086..3321
                     /locus_tag="U0290_001607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301651.1"
                     /translation="MSKFWVITKQVYKRRVKTKSFLISLLFPVLIAALIAGIPKMVDY
                     FDSSSDITKLAVLAEDPVFAKSLAADKNHFKVNTDIKDKKSAQSALKDGKIDGFVTIT
                     QEDDSVSAVYTTQETAGQDTITRLTEDLTATKIAEKAAAYKITNEQLQSITSPVSVTN
                     DLESNNQLTNHEKDVMSAAVLILTLVIFIFVMSYANIVASEIATEKGTRIMEVILSSV
                     SATTHLFAKLTAIIFMLLTQIGFYIVCGAIVLIAGRNTEMVQNVLDQIAVFPAYYLVL
                     NLLFVILGLLLYILLAAMIGSMVPNVETVAQFIYPMTILAIIGYWGSIAAANAPDNML
                     VIIGSYIPTFSPMMMLARMDLLSVSTIGIFSSLAILLASVVGAFFLTVRLYQGNVLLY
                     SNDGLWKTWKTSLSYAKRK"
     gene            3338..3811
                     /locus_tag="U0290_001608"
     CDS             3338..3811
                     /locus_tag="U0290_001608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301652.1"
                     /translation="MQIRLSKREDAASMIELEHLVWTPGTTPGSIHFDSEAEFLLKSP
                     PGSKIVVVADDKVVGILGYKSPIPLATNKHVAEIDIAVHPDYQRAGIGQLLMDKMKEV
                     AREKGFIKIALRVLSINQKAIRFYEKNGFKLEGRLEKEFIIQGEFVDDILMAYFL"
     gene            complement(4401..5066)
                     /locus_tag="U0290_001609"
     CDS             complement(4401..5066)
                     /locus_tag="U0290_001609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2301653.1"
                     /translation="MEKSGFVADPIYGEIKNEIMANTLENGEKVDIEDIMKRFQVSKR
                     VAFSALHCLHKSGIVCKNIGESGFSVAVNSEAEHREKSRLKLAFFHLNYAVQKLQEQD
                     AEVCATCLRKELVYIKLAAKEQDTDVFINHVKNFYACMIHYTEMPAMEKNIDILSQTL
                     RNMKEKNEKLFFEAFTIDVSQALEDLVTHLEAKEFEKCHSVIQHFYDKNISILFSESK
                     NPE"
     gene            5280..7022
                     /locus_tag="U0290_001610"
     CDS             5280..7022
                     /locus_tag="U0290_001610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannose-6-phosphate isomerase"
                     /protein_id="HEM2301654.1"
                     /translation="MTTYDLAPEVKIHQFDGAWAGYKDIATELRTAIQKKKQDQTIVA
                     IECYPGTRNEEIAAELLPLLPVEKVVFADDWALNNEEVTATIQSHLTDDRVFGIMSHY
                     EVSDFYPAEKLAEIQAEIAATKGLVVVYGTGATVIAPTPDILIYADLARWEIQCRYRG
                     ENKPNWKADNAGEDALRKFKRGYFFEWRMADRQKKKLYQQVDFLLDTNKKNEPKMVRG
                     EDYRNGLNQVSKAPFRVVPYFDASVWGGQWMKNNFGLDPAADNYGWAFDGVPEENSLY
                     MRFGDIRIEVPSTNVVNHFPNELLGPKVHSRFGTEFPIRFDYLDTVGGGNLSLQVHPL
                     VEYAQDKFGIHYTQDESYYILEADNDSTVYLGTKEGTTKEAIMTDLEKAAEGNYRFPD
                     EKYINVFPVKKHDHILIPAGTIHCGGPSTVVLEISATPYIFTFKLWDWERTGLDGMPR
                     PVHLEHGRENLQLDRDTKWVKDNLINQFETLHEDNDSKVERTGLHELEFIETHRHWFK
                     ETVTVHTNDSVNMLNLVEGESAVVESIDDSFAPFEVHYGETFIVPAIVGTYQIRNTSD
                     NEEVAVIQAFVRNL"
     gene            complement(7061..7795)
                     /locus_tag="U0290_001611"
     CDS             complement(7061..7795)
                     /locus_tag="U0290_001611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2301655.1"
                     /translation="MVRKLNKMYDASPLYAQIADDLREKIQTEVWQTGDKIPPELDLC
                     ELYNVSRITVRKAIDELVRENLLYRERAKGTFVRDWEEAEDEHFTLVRSFTNEMKELG
                     KKAATLHAEVEVINADKKIALQLGLSVGDKVLQIKRLRGTKDLAFALFISFIPYNQDY
                     SLKAEDYYGSFYEYLKGFGIVVNQEKEYIEAMLPNREVQEALAIDKQEPILKRVRMTK
                     QKESDFREYSECFYIGKHYRYYIDFE"
     gene            complement(7910..8926)
                     /locus_tag="U0290_001612"
     CDS             complement(7910..8926)
                     /locus_tag="U0290_001612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit IIC"
                     /protein_id="HEM2301656.1"
                     /translation="MKEYFIDRSYKASMGIANAVLVTLGIGLLLQTIGQMTGISFLVT
                     VGAIGKTMLIPGIGVGIAMCLHANTLVTISAAASAVIGGGAVATLAGGGVAITSGEPV
                     GAILAVIVAVWTGKRVTGKTKFDMILIPGVSLLAGGLSGILFAKIMAPILASVSLGIS
                     SLIGGSPLISSMVIAFVFGLLILSPASSAALAIALQLDPTASAAALIGCSVQFVSFAV
                     LSYRDNNWGAFFAQLICTPKLQTPNIIRKPSLMLVPLLTTLIAGPLGVMVFHIQAASE
                     VAGLGLCAFVAPLYLIANYGFSTLAAFILVAVVLPGVIALIVRPFLIKKERLKTGDLT
                     IELQ"
     gene            complement(8995..9849)
                     /locus_tag="U0290_001613"
     CDS             complement(8995..9849)
                     /locus_tag="U0290_001613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2301657.1"
                     /translation="MDEALRTYIRVVELQSFTKAAEELHISQPAVSLQLKKLEEIYET
                     ELIYRQAKKFILTATGEILYHRAKQLEGLYKQVEDEISLYHHHLKGRLRIGASFTIGE
                     YFLPEVIAKFHALYPDITIELIIENTAKIADKVELLQVDTGLIEGQVSKKDLEISAFS
                     DDEMCIVGRADGSLTEIEQGATWIAREEGSGTREYLDHVLSTNGWNVAEKVVAWSNMA
                     VKQMVLEGMGYTVISKCVVQTEITSGKLQTFNEAGSLMRKFSVLKNRQRLENRIAETF
                     LTFLKENQ"
     gene            9955..10962
                     /locus_tag="U0290_001614"
     CDS             9955..10962
                     /locus_tag="U0290_001614"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YeiH family putative sulfate export transporter"
                     /protein_id="HEM2301658.1"
                     /translation="MSQILFKTKTFWYGIALTFCIATLSYFLAKLPFLMILGQLVTAI
                     LIGIIIRALFPVPEKWFTGIQFSNKVILRAGIILLGFRLNLVDIYHAGWRVFLIAALC
                     LSFGITIVYFLAKLFGVDKKLAILVACGTGICGAAAVVAISPQVKADNNQTAVAATII
                     ALLGTIFTVIYTLIYPILPLGPDGYGIFAGATLHEIAHVIAAADPGGSSAVDMAVIVK
                     LTRVALLVPVCFVVAKMVNAGTKNRFSWAELPVPWFIFGFLATSAINSFGIIPTSVTD
                     FLVICAYFLIAMSMGGLGLNVHLPSFGKMGGKPFAAALIGSVFLSAFGLALVLLFHLA
                     G"
     gene            11018..11659
                     /locus_tag="U0290_001615"
     CDS             11018..11659
                     /locus_tag="U0290_001615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1361 domain-containing protein"
                     /protein_id="HEM2301659.1"
                     /translation="MTKAIWTCRAFLLGYFLVLHFTADTYTFLILNVGLAYIPFEIAV
                     FLTKKPRVWWIFWPLGIVWLVFFPNAPYLLTDLLHLQRLEIYGAEGILSTAPWLWRHF
                     TYIIVGVFFGLFIGFWSFAKMLAEIRRRFNWTSLLSYQLLLIGLILLSSYAIYIGRFS
                     RLHSIHLLTQPIDSLQIMFSVFHWPFWNFVFYFSIIQYVIYTLFSRFSSSLKN"
     gene            complement(11709..12026)
                     /locus_tag="U0290_001616"
     CDS             complement(11709..12026)
                     /locus_tag="U0290_001616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465673.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside triphosphate pyrophosphohydrolase
                     family protein"
                     /protein_id="HEM2301660.1"
                     /translation="MDFKEYQILANRTAATHEQALTNYGLGITGEAGEVADLIKKYAF
                     HGHDLDKESLTKELGDVLWYVSQIAKWADISMETVAELNIEKLKRRYPQGFSTERSKL
                     HID"
     gene            12225..12401
                     /locus_tag="U0290_001617"
     CDS             12225..12401
                     /locus_tag="U0290_001617"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301661.1"
                     /translation="MKLAGLVLLLIGLIGFGFSFSITGLIGFGVCIISIILVIAGIFA
                     MIRSKKRRKRSYSY"
     gene            complement(12444..12743)
                     /locus_tag="U0290_001618"
     CDS             complement(12444..12743)
                     /locus_tag="U0290_001618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotide pyrophosphohydrolase"
                     /protein_id="HEM2301662.1"
                     /translation="MKQLQAEITAFLKERDWLDQYNHPKDLAISLSLEAAELLECFQW
                     KTDEIALKENREELLKEVADVLIYALQIAESMGADGEELVRMKLAENRRRTWPKK"
     gene            complement(12852..13178)
                     /locus_tag="U0290_001619"
     CDS             complement(12852..13178)
                     /locus_tag="U0290_001619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465676.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin family protein"
                     /protein_id="HEM2301663.1"
                     /translation="MTSIEIKSPEEFQAHINGEELVYVDYWKDNCPNCKMLDLSFAEF
                     KNSEIASKVKVLKVKLEEMGENFFFDRDVQQTPTLVLYKGGEEIHRLNGFIPPNKIEE
                     AVSLNA"
     gene            complement(13175..13612)
                     /locus_tag="U0290_001620"
     CDS             complement(13175..13612)
                     /locus_tag="U0290_001620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465677.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavodoxin"
                     /protein_id="HEM2301664.1"
                     /translation="MRILLAYDSLSGNTKMVADEIEEILQSEGHEVVSFRVSPLAEYP
                     LDEDFDLYVLGAWTVDYGRTPPDMKDFIAELAVKPENVAIFGTGETQWGMEFYCGAVD
                     RMAKYFGTSYPTLKIEQMPHTEQDVADIDNWVKKILALRSGIK"
     gene            complement(13609..14658)
                     /locus_tag="U0290_001621"
     CDS             complement(13609..14658)
                     /locus_tag="U0290_001621"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465678.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleotide-diphosphate reductase subunit
                     beta"
                     /protein_id="HEM2301665.1"
                     /translation="MANQKEQLTRIKILEPLFPNRSTSIINGETSGILNWNDIPYPSF
                     YRAYKELSTNYWIPDEVDMKSDAKQYPALSEQEKYAFDAIIGLLATLDSPQTRFIYNI
                     AEYITDPAVHANAAIIAQQEVIHNESYSYVLASITNLQEQNRVFELARTHPTIIKRNE
                     PIMDAYDDFMNNKTGETLVKALIQSSILEGINFYSGFAYFYNLVRQNKMTGTGKIISF
                     INRDELAHSKFISEVIRAILGENPELQTEELVEYTHDAFRHAVELETEWSEEVLQGIE
                     GIDVEEMVDYVKYRANKMLGMLGIPELYPGHSDNTMTWIKAYADNFTETKTDFFEMRN
                     SSYKKTNMDNGFDDL"
     gene            complement(14714..17005)
                     /locus_tag="U0290_001622"
     CDS             complement(14714..17005)
                     /locus_tag="U0290_001622"
                     /EC_number="1.17.4.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonucleoside-diphosphate reductase subunit
                     alpha"
                     /protein_id="HEM2301666.1"
                     /translation="MKWGLQMTTYIVKDGGNRKLPFDKSRLDGYLEKIHEEFPKLDLE
                     DYKRKVFNFVEKKEDYAADELVDYLIREAEARTDIHIPEWEHFAARLYLNKLYKKASK
                     NRFYNDDDKYGSYVGLQESLGERGIYSGNILKNYSKEDLIAAGKLIDPEKDKLFTYNG
                     LYLLATRYLATDSERNVYELPQERWLTIALYLMQNEPKEKRMKLVEEAYWALSNLYMT
                     VATPTLANAGKVGGQLSSCFIDTVDDSLQGIYDSNTDVARVSKHGGGVGAYLGYVRST
                     GAAIRGVKGASGGVIPWIKQLNNTAVSVDQLGQRKGAIAVYLDVFHKDIESFLDLRLN
                     NGDQRLRAHDVFTAVCIPDIFMEAVERRGEWYLFDPHEVKAKKGWYLQDFYDESKGEG
                     TFREKYEELVADETISKKIVKAIDIMKRIMMSQLETGNPFMFYRDEVNRMNPNKHEGM
                     VYSSNLCTEIMQNMSPTKMIQEIISGDQIVITKQAGDFVVCNLSSVNLGRAVVAEEGT
                     LERLIEVEVRMLDNVIDLNELPVPQATITNQKYRSIGLGTFGWHHLLALKNIAWDSEE
                     AEKYADELYEQINYLAIRASNKLAQEKGAYKVFKGSDWNTGEYFARRNYNSPEWQELA
                     KEVAEKGLRNAYLVAVAPNMSTAQIAGSTASIDPIYSAFYYEEKKDYRRPVIAPDLNL
                     STYPYYEKGAYKVDQFASVRQNGRRQRHVDQSLSFNFYVPSGIKASKLLELHMTAWNE
                     GLKTTYYVRSNDIDVEECEWCSS"
BASE COUNT         5141 a         3437 c         3026 g         5733 t
ORIGIN      
        1 ttgaccattg gcttcatatg gctcaatagc tcgatcttta attgcttttt attaatcggc
       61 atattaattt tagcagccac ttgttcaata taaaaatcag tcatttcttc cacaatcggt
      121 aaaattttac ctggaactaa ttcgatttca tggttaaaac gagaagaaat caagtattgt
      181 aaaaaatgga aagtctctct ctccggtagc ttcattttca aatattgttc aattgcatca
      241 atggcttcta cagcaatcgt atgcaatttt tcatttgtga cgatataagc atcatcactt
      301 tctttaaaat cttctacttc cccttgacgg aaacggttga ttaaaatata caaatgtgaa
      361 aagatattaa tatcatacgg atacggaatg ctaatcatca gcttgttctc aatcaactcc
      421 atttgccgca caataaactg aacgtcagct ttattgagat cactgtattc tgttttcaaa
      481 tcatcatagg tcgataaatc caagttgtta atcacttcat taatggcggt ccggatgttt
      541 tcttcagtgc caacaacccg tatttctttt tgcctttttt caagagccaa atcatatttc
      601 tcgatggctt gatttaaaag agagaaatca tttttgattg aattataccc aacataataa
      661 tcttcataca gctctgttac attcaagtac tttggtgatt taaacaatac ttgcagcaag
      721 attttttcac gtctttctgt tggtgtatag ccaaaaatat cacctgtcgt ttctaattta
      781 gcttgtatgt aagctttata atctaactta aaaccacgcc ccttttcaga aatgatgata
      841 tcctttcttc cagttgtctc attgatgttt ttaatcttgc gataaatcgt tttagaggaa
      901 acgtctagaa tttcagctaa ttgctttgct gtcaaaaaat cgtttttcgt taagaacaag
      961 ttaattaatg catgctccga tttggttaga agcatttcat cacctccctc tacgctctat
     1021 tatacacaaa taaaagaaaa cggttacaac aagttatgtc cactacacta gacaattttt
     1081 tggctgagtt tgtgaaaaaa gtcgtcgtcg tagctcttta cttttagcaa gacaatcctc
     1141 caataaaacc gtataataaa aacagggaac aattagaaag gggtgctcgt gtgacgcttg
     1201 aactacataa tgttacgaaa aaatttggaa caaaagtcgc tgtcaatgat ttatcgtttc
     1261 gagtagaacc aggaaaaata ctcggattaa ttggtcaaaa tggcgctggt aaaacaacta
     1321 cttttcgcct tattttgcat tttttagaag ctacttctgg aaaaatcact tgggacggca
     1381 aagaagtaag caaaatcgat ccaaatatta tcggttattt gcccgaagaa cgtggtttat
     1441 atccaaatgt cacaattgaa gaacaattaa tattttttgc tgaattaaaa ggatatccaa
     1501 aacaaaaaat aaaggcagaa attgatagct ggctagaacg cgctgaaatt gtcggtaaaa
     1561 aaacagactt gatcaaaaca ctatccaaag gcaatcaaca aaaaattcag cttttaagta
     1621 caattattca ccaaccaaaa ctagttatct tagatgaacc attcagcggg ttagacccag
     1681 tcaatgcaga aattctcaaa aagtttgtat ttgacttacg cgcttcaggg gctgctatta
     1741 ttttttctag tcatcggatg gagaatgtgg aggaactttg cgactcgcta ttaatgttaa
     1801 aaaaaggaaa tgtggtcctc caaggaacaa cggaatctgt aaaagcggtt tttggtcgta
     1861 aacgtatttt gattgaatct agccatagtg cagcagaact cgctacttta ccaggtgttt
     1921 taaatgttca aacccaccgc gacggggttc tgcaacttga aattgaaaat gaaagtgacg
     1981 cagagaaaat ttttgaatat gtgacaaaag atggtttcat tcaaacgttt agtctccaag
     2041 ctccgacgct cgaagaaatt ttcaaatgga aggctggtga gctaaatgag taaattttgg
     2101 gtgattacga agcaagttta caaaagacgc gtgaaaacaa aatcattttt aatttcacta
     2161 ctttttcccg ttttaatcgc cgcgctcatc gctggtattc cgaaaatggt cgactatttt
     2221 gactcaagta gtgatattac aaagcttgcg gtacttgcag aagaccctgt ttttgccaaa
     2281 tctttggctg ctgataaaaa tcatttcaaa gtaaatacgg acattaaaga caaaaaatcc
     2341 gcccagtctg ctctgaaaga cggtaagata gacggatttg tcacgattac acaggaagat
     2401 gattcagtaa gtgccgttta tacaacgcaa gaaacagctg gtcaagatac tattacacgt
     2461 ttaaccgaag accttacagc taccaaaatc gctgaaaaag cggccgctta taaaatcacc
     2521 aatgaacaat tgcaatctat tacatctcct gtttcggtaa ccaatgattt agaatccaac
     2581 aatcagttaa caaaccacga aaaagatgtg atgagcgccg ctgtcctgat tttaacacta
     2641 gttattttta ttttcgtgat gagttatgca aacattgttg cttctgaaat agctacagaa
     2701 aaaggcacgc gcatcatgga agtcattttg tccagtgttt ctgcgacaac tcacttattt
     2761 gccaaattga ctgcgataat ttttatgctt ttaacacaaa ttgggtttta catcgtttgt
     2821 ggagctatcg tcctgattgc tggcagaaac accgaaatgg ttcaaaatgt cttagatcaa
     2881 attgctgttt tcccagcgta ctaccttgtg ctaaatttac tatttgttat tttaggtttg
     2941 ttgttgtaca ttttactcgc agcaatgatt ggttcgatgg tcccgaatgt cgaaactgta
     3001 gcccagttta tttatccaat gacaattctt gcaattatcg gctactgggg atccattgca
     3061 gcagcgaacg cgccagataa tatgttagtt atcatcggtt cgtatattcc gacattctcg
     3121 ccaatgatga tgctagcccg aatggactta ctttccgttt cgactatcgg catctttagc
     3181 tccctcgcta ttttactcgc aagcgttgtt ggtgcattct tcctcacagt tcgtctttat
     3241 caaggaaatg tgctacttta cagcaatgac ggtttatgga aaacttggaa aacctcgcta
     3301 tcttacgcaa aaagaaaata aggaaagttg gtaaattatg caaattagac tatctaaacg
     3361 agaagatgcc gcttcaatga ttgaattaga acatttagtt tggacgccag gaacaacacc
     3421 tggaagtatc cattttgata gtgaagccga atttttactt aaaagcccac ccggttccaa
     3481 aattgttgtc gtggcggatg ataaagtagt cgggattctt ggttataagt ctcctatccc
     3541 actcgcaacc aataaacacg tcgcagaaat tgatatcgct gtacatccag actaccaacg
     3601 cgcgggcatt ggtcaacttt taatggacaa aatgaaggaa gtggcacgcg aaaaaggttt
     3661 cattaaaatt gccttgcgtg ttctatccat caatcaaaaa gccattcgtt tctatgaaaa
     3721 aaatggtttt aaactggaag gacgcctaga aaaagaattc attattcaag gcgaatttgt
     3781 ggatgatatt ttaatggctt atttcctctg acaaaaggcc tggcttaaaa ttcaaactgt
     3841 gactttataa tcattttaca aataaagcgt ttacatttat ttagaacggt tatatataaa
     3901 gtacaacgaa caaataaaag gtgatgcgaa tgaaacaaac ttggtgtaca agctgatttt
     3961 tttctcagct ttgtcatatg ccggcaaaac gtctggtgaa ggattttagt gtcaagcagc
     4021 tacggttagc ttacaggagg aaggcgagga gtatacgccg cgtcaaggac tttacgctaa
     4081 cttagttgta ggaagacgga atttcgttac gtcgctcgtt tatcaatatt tttatcctca
     4141 ctacattggt aaataagcga ataaagtatc gtatcattta tggccactat ttaagcaagt
     4201 tacgggcgct catttattcg taagctagaa tatcttgaga agtaagtagc aagacaaaga
     4261 attcgcctac ttgtttgaaa atgcctcacc gttttccgaa tgttgtatgt ttattcagaa
     4321 acatccagac atggtccggc ccatcagatg agtggcaaga caagctcatc cgaaaagaaa
     4381 aaccccgcgt gacgaaatcg tcattcgggg ttttttgatt ctgaaaacaa gatagagata
     4441 ttcttatcat aaaagtgttg aatgactgag tggcattttt caaattcttt cgcttctaga
     4501 tgcgttacca agtcttccag ggcctgcgaa acatctatcg taaaagcttc gaaaaatagc
     4561 ttttcattct tttctttcat atttcgcagc gtttgactca gtatatcgat atttttctcc
     4621 atcgccggca tttctgtata gtgaatcatg caagcataaa agtttttcac gtgatttata
     4681 aatacatctg tgtcttgctc cttagcagct agttttatat aaactaactc cttacgaagg
     4741 catgttgcgc atacttctgc gtcttgttct tgtagttttt gtacagcata atttagatga
     4801 aaaaaagcta actttaatcg tgatttttcg cgatgctcag cttcactatt cacggcgact
     4861 gaaaaaccgc tttccccaat gtttttgcac acaataccac tcttatgtaa acaatggagc
     4921 gcactaaaag ctactcgttt gctgacttga aatcgtttca tgatgtcttc tatgtccact
     4981 ttctcgccat tttccaacgt attggccatt atctcattct tgatttctcc ataaatcgga
     5041 tctgcaacaa atccactttt ttccataatt cgaacctctt tattttttat tgctttcaat
     5101 gttatatttt acacgaaatt tttccattta gatatggctt tttgcgaaaa aatgtgtcca
     5161 ttacgttaca aaaacgattg tattgttata acaaaaatag acaatagatt gtaatgacaa
     5221 aatagatata caatgctata tttatattgt aataacaata taatcaagga gtgattgttt
     5281 tgaccacgta cgatttagca cccgaagtga aaatccacca atttgatggt gcttgggcgg
     5341 gttacaaaga tattgctaca gaactaagaa cggctattca aaaaaagaag caagaccaaa
     5401 ctatcgttgc gattgaatgt taccccggaa cacgaaatga agaaattgct gccgaactac
     5461 ttccattatt accagtcgaa aaagtggttt ttgcagatga ttgggcatta aacaatgaag
     5521 aagtaacagc tacaatccaa tctcacttaa cagatgaccg ggtgttcggc attatgtccc
     5581 actatgaagt gagcgacttt tatccagcag aaaaacttgc tgaaattcaa gcggaaattg
     5641 ctgctactaa agggttagtt gtggtttacg ggactggcgc aactgttata gcaccaacac
     5701 cagacattct tatttatgct gatttagctc gatgggagat tcagtgccgc taccgcggag
     5761 aaaataaacc taactggaaa gcagacaatg ccggtgaaga tgcgcttcgt aagttcaagc
     5821 gtggttattt cttcgagtgg cgcatggctg atcggcaaaa gaaaaagctt tatcaacaag
     5881 tagatttctt acttgatacc aataaaaaaa atgagccaaa aatggtgcgc ggagaagatt
     5941 atcgaaatgg cttgaatcaa gtttccaagg ccccttttag agtagttcct tactttgatg
     6001 caagtgtatg gggaggtcag tggatgaaga ataactttgg gcttgatcct gcagctgata
     6061 attacggctg ggcatttgac ggcgttccag aagaaaatag tttatacatg cgatttggag
     6121 atattcggat tgaagttccg tctaccaatg tagtaaacca ttttccgaat gaattacttg
     6181 ggccaaaagt acatagccgt ttcggtacgg aattcccgat tcgtttcgac tatctcgata
     6241 cagtgggtgg agggaattta agtctgcaag tccatccatt agtagagtat gcgcaagata
     6301 agttcggtat ccattatacc caagatgaaa gttattatat tttagaagca gataacgact
     6361 ctaccgtgta tcttggaaca aaagaaggta caacaaaaga agcgattatg acagatttag
     6421 aaaaagccgc tgaaggaaat taccgttttc ccgatgaaaa atatattaat gtcttccctg
     6481 taaaaaaaca tgaccatatt ttaattccag ctgggacgat tcattgtggt ggtccaagta
     6541 ccgtcgtcct agaaattagt gcaactcctt atatcttcac gtttaaatta tgggactggg
     6601 aacgcactgg actcgatggc atgcctcgcc ctgttcattt agagcacggc agagaaaatt
     6661 tacagcttga ccgcgacacc aaatgggtaa aagacaactt aataaaccaa tttgaaacat
     6721 tacatgaaga taacgattca aaagtagagc gcactggttt gcatgaatta gaatttattg
     6781 aaacccaccg ccactggttt aaagaaacgg ttaccgtcca tacaaacgat agcgtcaata
     6841 tgctcaattt ggtagaagga gaaagtgctg tcgttgaaag tattgacgac tctttcgcac
     6901 cgtttgaagt gcattatgga gaaacattta tcgttcctgc gattgtcgga acttatcaaa
     6961 tcagaaatac gagcgataat gaagaagtgg ctgttattca agcttttgta cgtaatttat
     7021 aaaaaagaaa tgcctatcaa tatttttgat aggctttctt ttattcaaaa tcaatataat
     7081 agcgataatg ctttcctata taaaaacatt cgctgtattc tctaaaatca ctttcttttt
     7141 gtttcgtcat ccgcaccctt ttcaaaattg gttcttgttt gtcgattgcg agcgcttcct
     7201 gtacttcacg attaggcaac atcgcttcaa tatattcctt ttcttgattc acgacaatac
     7261 cgaagccttt caaatattca taaaaagaac cgtaataatc ttctgcttta agtgagtaat
     7321 cttgattata aggaataaaa ctgataaata aagcaaatgc caagtctttc gtaccgcgta
     7381 gccgcttaat ttgtagcacc ttgtccccga cagaaagccc tagctgtaac gcaatttttt
     7441 tatcggcatt gatcacttct acttccgcat gtagcgtagc cgccttttta ccaagttctt
     7501 tcatctcatt cgtaaaactg cgcactaacg taaaatgctc atcctctgct tcttcccagt
     7561 cacgtacaaa agtacctttc gcgcgctctc tataaagtaa attctcacga acgagttcat
     7621 caattgcttt tcgaacggta attctactga cattgtataa ctcacataaa tcaagctctg
     7681 gtggaatttt atctccagtt tgccaaactt ctgtttggat tttttctcgt aaatcatcag
     7741 ctatttgcgc atagagcgga gatgcatcgt acattttatt taactttctc accatagtaa
     7801 gccttccttc tcaaattgta ttattgtcat cacaatgaat catagcataa gcttatccaa
     7861 aattccaata taaaaagtag agctattaag ccctactttt taaactattc tactgcaact
     7921 caatcgttaa atcacctgtt ttgaggcgtt cctttttaat aagaaacggt ctgacaataa
     7981 gtgcaataac acctggcaag acaactgcta ccaaaataaa agcagcaagt gtgctgaatc
     8041 cgtaatttgc tattaaataa agaggtgcaa caaaggcgca taagccaagg cctgcaactt
     8101 cacttgcggc ttgaatgtga aataccatca caccaagagg tccagcaatt agtgttgtta
     8161 atagtggtac taacatgagg ctaggctttc taataatatt aggtgtttgt aatttaggtg
     8221 tacagataag ttgggcaaaa aatgcacccc agttattatc ccgataactt aacaccgcga
     8281 atgacacgaa ttgaaccgag caaccaatca acgccgcagc acttgctgtt ggatcaagtt
     8341 gaagcgcaat cgcgagcgca gcagaagaag ctgggctaag tatcagtaat ccaaacacaa
     8401 aagcaataac catcgatgaa atcagcggcg aaccaccaat taatgaacta attccaagac
     8461 ttacagaagc taaaatcggc gccataatct ttgcaaataa aataccgctt agtccgccag
     8521 ctaaaagtga aacaccggga atcaaaatca tatcaaattt cgtctttcca gtgactcgct
     8581 tcccagtcca aactgccaca ataacagcca aaatagctcc gactggttct ccgctagtaa
     8641 tagcaactcc gccaccagct aacgtcgcca ctgccccacc accaataaca gcagaggctg
     8701 ccgcacttat cgtcacaagc gtattcgcgt gcaagcacat cgcaatacca acaccaattc
     8761 ccggaattaa catcgtttta ccaattgctc caaccgttac aagaaatgaa atccctgtca
     8821 tctgcccaat tgtctgtaaa agaagtccaa ttccaagcgt tacaagaacc gcattcgcaa
     8881 tccccataga agccttatag gaacgatcta taaaatattc tttcattgct tctccctttc
     8941 taaaatgtat tctttctcat tgtaatcact agttaattaa aaagctagtt ttatttactg
     9001 gttttccttt aaaaatgtta aaaaggtttc agcaattcga ttttcaagtc tttgtctgtt
     9061 ttttagtacc gaaaacttcc gcattaagct accagcctca ttaaacgtct gcagttttcc
     9121 tgatgtaatt tctgtttgaa caacacactt agaaataacg gtgtagccca ttccttcaag
     9181 aaccatttgt ttgaccgcca tattactcca agcaacaact ttttcagcaa cattccagcc
     9241 attggtactt aatacatgat ccaaatattc acgcgttcct gagccttctt ctcgcgcaat
     9301 ccaagttgct ccttgttcga tttcggtaag tgaaccgtct gctcgaccaa cgatacacat
     9361 ctcatcatcc gaaaaagcac ttatctccaa atctttctta cttacctggc cttcaataag
     9421 ccctgtgtcc acttgaagaa gttccacttt gtcagcaatt ttcgcggtat tttcaatgat
     9481 tagttctatt gtaatatccg gataaagggc atgaaatttc gcaatcactt ctggcaaaaa
     9541 atactctcct atcgtaaaac tagcaccaat tcgaagtcga ccttttaaat gatggtgata
     9601 taaacttatt tcatcttcca cttgtttata tagaccttct aattgcttgg cacggtgata
     9661 taaaatttct cctgttgctg ttaaaataaa ctttttagcc tgcctgtaaa taagctctgt
     9721 ttcataaatc tcttctaatt tctttaattg caacgataca gcgggttgcg aaatgtgtaa
     9781 ttcttcagct gcttttgtaa aactttgcaa ttctactact cggatatatg ttcttaatgc
     9841 ctcatccata gtaacacctc cataaaaata acttatcaat aatataatta atataaattt
     9901 tactaataaa atcaagaatg gtaaagtaaa agtataaaag aaagggggat gaacatgagt
     9961 caaattttat ttaaaacgaa gactttttgg tatggtattg cgcttacttt ctgtattgct
    10021 accttatctt attttttagc gaagttgcct tttttaatga ttctcggaca acttgtaact
    10081 gctattttaa ttggtattat cattcgtgca cttttcccag ttcctgaaaa atggtttact
    10141 ggtattcagt tttccaacaa ggtaattctt cgtgctggga ttattttact tggttttcgc
    10201 ttgaacttag ttgatattta tcatgctggc tggcgcgtgt ttctcattgc tgccttatgc
    10261 cttagctttg gtattactat tgtttatttc ttagccaaac tttttggagt ggataaaaaa
    10321 ctagctattt tggtcgcttg tggtacaggg atttgtggtg ctgctgcagt agttgcaatt
    10381 tctccacaag taaaagctga taataaccaa acggctgtgg ctgctacaat tattgcatta
    10441 cttggaacta ttttcactgt tatctatacg ttgatttatc caattctgcc acttggacca
    10501 gacggttatg ggatttttgc aggggctaca cttcatgaaa ttgcccacgt tattgcagct
    10561 gcagatccag gcggctcatc agctgttgat atggcggtta ttgttaaatt aacacgtgta
    10621 gccttacttg ttccagtctg ctttgttgtt gcaaaaatgg ttaatgctgg aactaaaaac
    10681 cgtttttctt gggctgaact tcctgtacct tggtttattt tcggcttttt agcaactagt
    10741 gcaattaaca gctttggaat tattccaaca tctgtaactg attttcttgt catctgcgca
    10801 tatttcctca ttgctatgtc aatgggcgga ctcggtttaa atgtccactt gccatcgttc
    10861 ggaaaaatgg gtggaaaacc ttttgctgcg gcgttaatcg gttctgtttt cctttccgca
    10921 tttggtctag ctttagtact tttgtttcat ttagcaggtt aagatgtcct cgtcacctcg
    10981 atttgtgata caatagcaaa cacgaggtga ctatttcatg acgaaagcaa tttggacttg
    11041 ccgagcgttc ttactcggat actttcttgt gctgcatttc actgcagata cttacacttt
    11101 tctaatttta aatgtcgggc ttgcttatat acctttcgaa atagcagtat ttctcacaaa
    11161 aaaacctcgc gtctggtgga ttttttggcc actaggtatt gtttggctag tatttttccc
    11221 aaatgcaccg tatcttttaa ctgatttact tcatttacaa cgtttagaaa tatacggggc
    11281 agaaggaata ctttcaacag caccttggtt atggcgacat ttcacttata ttatcgtcgg
    11341 tgtgttcttt ggattattta ttggattctg gtctttcgca aaaatgcttg cagaaataag
    11401 aagacgattt aattggacta gtttactaag ttatcaatta cttttgatag gattaatttt
    11461 gttatctagt tatgcgatat acattggacg gttctctcgt ttacactcca tccatttact
    11521 tacgcagcca attgactcat tgcaaattat gtttagtgtt tttcactggc cattttggaa
    11581 ttttgtgttt tacttttcga ttattcaata tgtaatttat acgctattta gcaggttttc
    11641 tagctcacta aaaaactaaa aacgtttgta ttttaggaaa attaattttc ttaaatacaa
    11701 acgttttttt aatcgatatg tagcttactt cgctctgttg aaaaaccttg aggataacga
    11761 cgctttaatt tctcgatatt taattctgct actgtttcca tgcttatatc tgcccattta
    11821 gcaatttgtg atacgtacca aagtacatcc cctagctctt ttgttagaga ttccttatct
    11881 aaatcatgtc catgaaaagc atatttctta atcaaatcgg caacttcacc ggcctctcca
    11941 gtaataccaa gtccgtaatt tgttagtgcc tgttcgtgtg ttgcagcagt tctattcgct
    12001 aaaatttgat actctttaaa atccatatgt tttcctcctt gcttctctca ctttcttact
    12061 ataacagata atttttttcc tttgcagtct tgactatttc caacttatgc gaactgatgc
    12121 tctatcaatg catttcatct ttaaaaattt tttatcttta aagtcttatt tttttcagat
    12181 aattcctata taatagagat aagatttctg aaaggagttt tcaaatgaaa ttagctggct
    12241 tagtgttact tctgattggt ttgattggtt ttggcttttc gtttagcatt accggactta
    12301 tcggttttgg tgtatgtatc atttctatta tcttagttat agcaggaatt tttgcaatga
    12361 ttcgttccaa aaaacgccgt aaacgttctt attcttatta aaataaaaag ctgccttatc
    12421 atcatttggt aaagcagctt tttttatttc tttggccaag ttctcctacg attctctgct
    12481 aatttcattc gaacaagttc ctcgccgtcc gcccccatac tctctgcaat ttgaagagca
    12541 tagataagca catcagctac ttcttttaaa agttcttcac gattttcttt taacgctatt
    12601 tcatctgttt tccactgaaa gcattcaagt aattctgctg cttcaagtga caatgaaatt
    12661 gccaaatctt ttggatgatt gtattgatct agccaatcac gctcttttag aaaagcagta
    12721 atttcagctt gtagttgttt cactatttta actcctttag aagaatttat ttgtgaaaaa
    12781 tatcgcaagt acttgtaaaa aaatgagcac caagccacct atttacaagg agacctgcta
    12841 ctctcattaa attacgcgtt taatgaaact gcttcttcaa ttttgtttgg tggaataaat
    12901 ccatttaaac ggtggatctc ttcgccgcct ttgtaaagta caagtgttgg cgtttgttgt
    12961 acatcacggt caaaaaagaa attttcgccc atttcttcta attttacttt taatactttc
    13021 actttgcttg cgatttcaga gtttttgaat tcagcaaaag aaagatcaag cattttacaa
    13081 ttaggacaat tatctttcca atagtctaca tatactaatt cttctccatt tatatgagct
    13141 tggaactctt caggtgattt aatttcaata cttgtcattt gattccactc cttaacgcta
    13201 aaattttctt gacccaattg tctatatcag ccacatcttg ttctgtgtgt ggcatttgtt
    13261 ctatttttaa agtcgggtag cttgtgccga agtattttgc cattcggtca acagctccgc
    13321 aataaaactc cataccccat tgtgtttccc cagtaccaaa aatggctaca ttctcgggct
    13381 taacggctag ttccgcgata aaatctttca tatccggcgg tgttcttccg tagtcgactg
    13441 tccatgcccc caacacgtac aagtcaaaat cctcatcaag cggatactcg gctagaggag
    13501 atacgcgaaa ggacacaacc tcatgtcctt cgctttgtaa aatctcttca atttcatcag
    13561 ccaccatttt cgtattacca cttagagaat cataggctaa caaaattctc ataaatcgtc
    13621 gaatccgtta tccatattcg tttttttata gcttgaattg cgcatttcga aaaagtcggt
    13681 ttttgtttct gtaaagttat ctgcgtatgc tttaatccat gtcattgtgt tatcactatg
    13741 tcctggataa agttctggaa taccaagcat tcctagcatt ttgttggccc gatatttcac
    13801 gtagtcaacc atttcttcca catcaatacc ttcaatacct tgtaacactt cttcagacca
    13861 ttctgtttca agttcaacag cgtggcggaa agcatcatgt gtgtattcta ctagctcttc
    13921 tgtttgtaat tctgggtttt caccaaggat tgcccggatt acttctgaaa tgaacttcga
    13981 gtgagcaagt tcatcacgat tgataaagct aattattttc cctgttccag tcattttatt
    14041 ttgacgaaca agattgtaga agtaagcaaa accactatag aaattaattc cttctaaaat
    14101 agaagattga attaatgctt ttacaagtgt ttcacctgtt ttgttattca tgaagtcatc
    14161 atatgcgtcc atgattggct cattacgttt gatgattgtc ggatgtgttc tcgcaagttc
    14221 aaatacgcga ttttgttctt gtaaattggt aatagatgca agtacatagg aataactctc
    14281 attatgaatg acttcttgtt gcgcgataat cgctgcgttt gcatgaacag ctggatcggt
    14341 aatatattcc gcaatattat aaataaaacg tgtttgcgga gaatccagtg ttgctagcaa
    14401 gccaatgatt gcatcaaaag catatttttc ttgttctgaa agagcgggat attgttttgc
    14461 atcgcttttc atgtctactt catctggaat ccagtagtta gtagaaagtt ctttatacgc
    14521 acggtagaaa gaaggatacg ggatgtcatt ccaatttaaa atcccactag tttctccgtt
    14581 tatgattgaa gtagaacgat taggaaataa aggttctaaa attttaatac gtgtcagttg
    14641 ttctttttgg ttagccatct aggcaagccc tccctttcat tttgtactaa gtgtaaagta
    14701 ttttagagat gtatcagctt gagcaccatt cgcactcttc aacatcgata tcgttagagc
    14761 gaacatagta agttgtttta agtccttcat tccaagccgt catgtgtagt tcaagtagtt
    14821 tacttgcttt gataccactt ggtacataga agttaaagct tagtgattgg tctacgtgac
    14881 gttgacgacg accgttttga cgaacgcttg cgaattggtc aactttgtaa gcaccttttt
    14941 cgtagtatgg gtatgtgctt aagtttaagt ccggtgcaat aactggacga cggtaatctt
    15001 ttttctcttc atagtagaat gcactgtaaa ttgggtcgat tgaagcagtg gatccagcaa
    15061 tttgagctgt actcatattt ggtgctacag ctacaagata tgcattacgc aaaccttttt
    15121 ctgctacttc ttttgctaat tcttgccatt caggtgaatt atagttacga cgcgcgaagt
    15181 attctccagt attccaatca ctgcctttaa agactttata agcacctttt tcttgcgcta
    15241 gtttgttact tgcgcgaata gctaaatagt taatttgttc atataattca tcggcatatt
    15301 tctccgcttc ttctgagtcc caagcgatat ttttaagagc aagcagatgg tgccaaccaa
    15361 atgttccaag tccgatagaa cggtactttt ggttcgtgat agtagcttgt ggtactggta
    15421 gttcgtttaa gtcgataacg ttatctaaca tccgtacttc tacttcgatt aaacgttcta
    15481 aagtaccttc ttcagcaaca accgcacgac ctaggttaac agaagataag ttacatacaa
    15541 caaaatctcc cgcttgtttt gtgataacaa tttgatctcc agaaataatt tcttgaatca
    15601 tttttgttgg gctcatattt tgcatgattt ctgtacataa gttactagaa tacaccatgc
    15661 cttcatgttt attagggttc attctgttta cttcatcacg gtaaaacatg aatggattcc
    15721 ctgtttctaa ttgactcatc ataatacgtt tcatgatatc aatagcttta acaatttttt
    15781 tgctaattgt ttcatctgct actagttctt catatttttc acggaaagta ccttcacctt
    15841 ttgattcatc gtagaaatct tgtaggtacc agcctttttt cgcttttact tcatgtggat
    15901 caaacaaata ccactcgcca cgacgttcta cagcttccat gaaaatatca gggatacaaa
    15961 ctgcagtgaa tacatcatgt gcgcgtaaac gttggtcacc attgtttaat cgcaaatcaa
    16021 ggaaagattc gatatcttta tggaaaacat ctaaataaac tgcaatcgcg cctttacgtt
    16081 gacctaattg atctacgcta accgcagtat tgtttaattg tttaatccaa ggaataacgc
    16141 caccacttgc gcctttgacg ccgcggatag cagctcctgt tgaacgaaca tacccaagat
    16201 atgcgccaac accaccaccg tgcttagaaa ctctagcgac gtctgtatta ctgtcataaa
    16261 taccttgcaa gctatcatct acagtatcaa tgaaacaact agacaattga ccgccaactt
    16321 ttccagcatt tgcaagtgtc ggtgttgcaa cagtcatata taaattactt aaagcccagt
    16381 aagcttcttc tactagtttc atccgttttt cttttggttc attttgcatt aaataaagtg
    16441 cgatagttaa ccaacgttct tgtggcaact catacacatt acgttcagag tcagtcgcta
    16501 agtaacgagt cgcaagtaaa tacaaaccat tataagtgaa taatttatct ttttcagggt
    16561 caattaattt ccctgctgca atcaaatctt ctttagaata attttttaga atattgccag
    16621 aataaatacc acgttcgcct agactctctt gtagtccaac gtacgaacca tatttatcat
    16681 catcattata gaaacgattt ttacttgctt ttttatataa tttatttaaa taaaggcgtg
    16741 ctgcgaaatg ttcccattca ggaatatgaa tatcagtacg agcttctgct tccctaatta
    16801 aataatcgac taattcgtca gccgcataat cttccttctt ctctacaaaa ttaaaaacct
    16861 tacgtttgta atcctccaaa tcaagtttcg gaaattcttc atggattttc tctaaatatc
    16921 catccaatcg gcttttgtca aaaggtagct ttctgtttcc cccgtctttt actatgtaag
    16981 ttgtcatttg caatccccat ttcatccttt tttcctcgtt gtaaaaatat ctgattcact
    17041 ttgcgctttt tattcgtccg ctgaactatt gtggtcgttc catggagcaa aaaaattaac
    17101 ttttaaagga gcaaattccc ctgataaaag ttaaaaggcg atgaagcaat atttcgcttt
    17161 cgatactata tatagtataa ctttttcatt gtgaatgcaa gatatagtac tctggtttta
    17221 ttacgaaaag tgtctaaaca atgattacaa caaggttttc agcaaataaa aaaatttttt
    17281 ccggcacttg tgtgttttcg agcatatttc aagtataaaa atgctactac ttctagt
//
LOCUS       DASDYO010000059        17267 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.059, whole genome shotgun sequence.
ACCESSION   DASDYO010000059 DASDYO010000000
VERSION     DASDYO010000059.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 17267)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17267)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17267
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.059"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(191..1744)
                     /gene="cshA"
                     /locus_tag="U0290_001623"
     CDS             complement(191..1744)
                     /gene="cshA"
                     /locus_tag="U0290_001623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464392.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase CshA"
                     /protein_id="HEM2301667.1"
                     /translation="MTKFSEFGLDEKIVKSVNRMGFEEATPIQEKTIPLGLAGKDLIG
                     QAQTGTGKTAAFGLPMIHKIDQKSNNVQALIIAPTRELAIQVSEELYKLSYDKHVRVL
                     AVYGGSDISRQIRSLKKNPQIVVGTPGRILDHINRRTLKLDHVETLVLDEADEMLNMG
                     FIDDIETILKEVPAERQTLLFSATMPDPIRRIGERFMHSPELIRIKAKEMTALLIEQF
                     FVKVHEKEKFDVLSRLLDVQAPELAIVFGRTKRRVDELSRALDMRGYVAEGIHGDLTQ
                     AKRMSVLRKFKEGKIDVLVATDVAARGLDISGVTHVYNYDIPQDPESYVHRIGRTGRA
                     GKEGMAITFVQPREMGYLRIVEETTKKRMQPLQAPTWDEAFAGQLRVATEKIQEAITE
                     ENLADYKTFANELLEKYDATDIAAAMLKMLAKEPDKTPVHITEERPLPSRGGGGYKGK
                     NGKGGKGGGYRGGSGKGGSYRDRNNSGKGRRSGGGSGSGGGGNRDRRSGGGEQRSGGN
                     KGNYSQKSK"
     gene            complement(2206..3879)
                     /locus_tag="U0290_001624"
     CDS             complement(2206..3879)
                     /locus_tag="U0290_001624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464391.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HEM2301668.1"
                     /translation="MTWQQHLNAWQNADLSDEWRRELQRVEQEQERFDGYLTFGTGGM
                     RGKMGVGTKRINLFTIRRVAKGLGDYVVANGGAEMGVAIAYDSRHHSGAFAQDTAKVL
                     AAQGVKVYLSDTIRPTPALSFCVREKGAFAGVVITASHNPSIYNGFKVYDKNGCQITL
                     GVAQEIAGYLENTTDIFTIPVRELPNPLVMTLGKEMDDAYLKALTAVVSRPDLLADYG
                     NELQICYTPLHGAGKELVMRGLLENGFSETTMIAEQSEPDGDFPTVVSPNPEEENSFE
                     LAKKQAKEIQADIILATDPDADRLGVAVLNKQATYQILTGNQLGALLLQYILEAKTSV
                     TQADTMINTIVTGDLGGRIAHDFGINHIQTLTGFKFIGEKIAEMEGTEKNFLFGYEES
                     YGYLIAPFVRDKDAVQAALLTAEMALFYKKEGTTLLQKLTNLYEKFGYHKEHLHTITL
                     DDSDGTTKMNQVIDDLRKEPTCIPGITVLEDFLTSKRTNLSTMEMTNIELPKENVLKF
                     YLNDNAWFAIRPSGTEPKCKIYFQTIGQTEEIATKAMDELKKCVLAKWD"
     gene            complement(3876..4943)
                     /locus_tag="U0290_001625"
     CDS             complement(3876..4943)
                     /locus_tag="U0290_001625"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464390.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 130 protein"
                     /protein_id="HEM2301669.1"
                     /translation="MNIYRYEENPLITPLDVKPIHEGFEVIGAFNAGVAEYNGEVLLL
                     LRVAEKPVSEDPEVVLAPVYNAKSKELELQQFRLDDENYDFEDPRMIRSKAKLEGFSY
                     LTSLSYIRIARSKDGHQFTLDEKPFLYPFNEYQTFGIEDARVTQIGDTYHVNFSAVSE
                     FGVADALVTTKDFENLEYQGNIFAPENKDVLIFPEKINGKYYALHRPSLKSIGNLDIW
                     IASSPDLRSFGDHRHLLGIRPGEYDSGRVGGGCVPIKTEEGWLILYHGATEENRYVMG
                     AALLDLNDPTIVLKRTKTPILEPVADYEKNGFFGDVVFACGAIQEGDTLHMYYGVADT
                     SMAGCDMKISEILHQLEVENK"
     gene            complement(4965..5879)
                     /locus_tag="U0290_001626"
     CDS             complement(4965..5879)
                     /locus_tag="U0290_001626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464389.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1861 family protein"
                     /protein_id="HEM2301670.1"
                     /translation="MNTIENLLQVYRENSAAFGTRITLNGAGDKDVYNITAPFHWLGK
                     EYIAGRVESRDSEFSEVRFFEKIETDKYQLVENTTVLALQDPFVTFVQGELIIGGVEV
                     FPKETDPTMLDWRTNLYRATSLTDFEQILAGPIGMKDLRIKELADGRILVLTRPQGEK
                     GGRGKIGAIVIDSLAELTIEKIEAAPLLKRNFSGEEWGGGNELHLLEDERIGVLGHIA
                     CFDEAGNRHYYACSFRLNEDFSQIEQEKIIAERANFAPSEPKRPDLADVVFSGGLIRN
                     SDGTATLYAGIGDSDAQKLAIPDPFKNN"
     gene            complement(5881..7413)
                     /locus_tag="U0290_001627"
     CDS             complement(5881..7413)
                     /locus_tag="U0290_001627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464388.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucohydrolase"
                     /protein_id="HEM2301671.1"
                     /translation="MEFWRRSVFYEIYMKSFQDSNGDGLGDFKGLTSRLDYLVDLGID
                     GIWLTPFYPSPQVDNGYDVSDYCDINPDYGDMTDFRAFMKAADARGIKVIIDLVLNHS
                     STEHAWFKESRSSKTNPKRDYYIWREKPNNWESFFGGSAWEMDELTGEYYYHSFAKEQ
                     ADLNWANEAVRAEMEQVLAFWLNEGVAGFRLDVINNLTLVLEFTDNPVTSGEMEHVYD
                     RNQSGLEQALEDIASFCRKERDVFLVGEISSDQLAEIARYSSKKMLDVTFNFNFGSVD
                     QLDAKSVFTTLNEMETALNEGQWPTLFFGSHDMSRFRSRLASGDIVKTQLLAFLMLTA
                     KGVPFIYYGEEVGMPDLTFSSVKEMRDIQGTAAYYQALQTGSDEKQALEIAIEKTRDK
                     ARGPMIFPDGKPFTLGEPWIKMATLPEKEARTMWRFYQGLLAFRKENDFKEMEYTFLK
                     LDGEVLSYQRGEFIFLLHFGEEEVTYPLQGNYQLVFGEAVMVGNGIRMGAHTGIALRV
                     EE"
     gene            complement(7429..8262)
                     /locus_tag="U0290_001628"
     CDS             complement(7429..8262)
                     /locus_tag="U0290_001628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464387.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2301672.1"
                     /translation="MVGHNSKAGKIVRYILTTLLMLVMIYPFIYLVLNSFAAWDQVDK
                     KLIPTEFTTRSWDWLFGNSVVAAPAPWIHAFINTIIVSTIATGLMLLFGLMVGYALAK
                     VDFKGKKIVNNAILFQMFFPAIILLIPQFLMITDFGLLDTYAGMIIPTMLSLWAVFMY
                     TNFFKAIPDTLIEAAKLDGASDLKILFRVVLPMSKSITTVIFLFLFTDRWTNLLWDML
                     VTKSDGTVTLNVLISQMFGPYATYPGPMYAASVLLTLPLIILFLFFSKKFQEGMQFTL
                     K"
     gene            complement(8249..9127)
                     /locus_tag="U0290_001629"
     CDS             complement(8249..9127)
                     /locus_tag="U0290_001629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464386.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2301673.1"
                     /translation="MKRRNNKLGWSFTSPYLIFTAIFFLVPLVWSIWLSVTDWNMMSP
                     EINFVGFDNFIKAFTSPAVQAAFFVTYKFLIVFVPMALIISMIVAVLVNGLPKFKGLY
                     LVAFFLPYLSSGVVTSLIVQGLLSYNSALNVFLRGHFGWDIDWLGTPMSALVIISLMI
                     AWKMSGYYALILISGLASINHEIYEAAAMDGSGRFRTFWKVTVPMLYPALFTVIVLAV
                     SVSFGIFTEVYQLTGGGPNFATNTWQMEIFNQAFVNLNSGYASAISLMAATVTFASIG
                     VIKKMLEKWGQRNGWT"
     gene            complement(9124..10443)
                     /locus_tag="U0290_001630"
     CDS             complement(9124..10443)
                     /locus_tag="U0290_001630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464385.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2301674.1"
                     /translation="MKIRKIAIAALSVVVAGSLLTACGGGNSKSDDNGKTKVTFWAAP
                     NPTQVKYWDEMAKAYEKENPDVTIEVSQMKESPSSEATIQSAIASKTAPTMSENINRS
                     FAAQLADSKAIVPLNDVKGLDDVVKERNMSETMDSWKFSDGNQYVLPVYSNPILFAWR
                     LDTLKELGYDAPPKTYSEALEVGKKLKAKYPDKVLWAKGDLSDPTAWMRWFDFFPLYD
                     AASKGNAFVEDGKLVADDKAGTELLTFMSELQKNKLLLASKATDPFETGTSIMADNGP
                     WTFPNWDEKFPELKYNENYAITAPLVPDNMANEENVATYADSKGVVMYAQATDKEKEA
                     AMDFLKFVYNDDKNDLKFLETTNLIPARDDATENETFTAFFKENPELEVYAANVPYSI
                     PAMDDAKYNDIQQIIGEEAWNPIVRGEKKPAKAWSDMKKAEDGVLQE"
     gene            10687..11712
                     /locus_tag="U0290_001631"
     CDS             10687..11712
                     /locus_tag="U0290_001631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464384.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2301675.1"
                     /translation="MKKVTMQDIADRLNITKNSVSQALGNKNGVSEQTKLAVFKMADE
                     LGYKYKREIAREVVKEKFALLATSFALSQRSFFGEIIDNMKQSIIAHQAELIIFPVTD
                     EEASTNQLPEQLTSENWTGIFLLSHINTDYSKKVIDLGMPVVLIDHHDPHLKADAVIS
                     QNKDGAFMAVEFLIQNKHQKIGFLGDVTFSPSYEERLEGYKKALHYYHIPFNEKYAIT
                     RIKEEQTTLYRTLDELDELPTAWFCVNSGLGFILNTYLQSKGYNIPNDLSIICFDNTE
                     FTVLSNPQLTTMCTNLSYMGEKAVELMYNRIRKPDEGFVHLALATNLIARDSVGENKK
                     ADSASES"
     gene            complement(11724..12437)
                     /locus_tag="U0290_001632"
     CDS             complement(11724..12437)
                     /locus_tag="U0290_001632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464383.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta fold hydrolase"
                     /protein_id="HEM2301676.1"
                     /translation="MVACLCIHGFTGSPSEVKPLADYLREHTDWDVLAPTLPGHDHLR
                     HLKNVTYKDWIVFVDSILSQMLKEDDEVYIIGFSMGGLLAGWLARHYPEVKKLVLLST
                     AVNAMEWPQLVENSKQVLTEAKEVTLKNSPMFKRYQKKVTETPWTSTLQFKKMVALAK
                     PVFEHIEIPTFIAQGSADQVVPAEKSVNFLMESIPGPKELFILEGSKHVICQDEQADK
                     LFAAVLTFLQKDVAVLNAQ"
     gene            complement(12504..13877)
                     /locus_tag="U0290_001633"
     CDS             complement(12504..13877)
                     /locus_tag="U0290_001633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464382.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramoyl-tripeptide--D-alanyl-D-
                     alanine ligase"
                     /protein_id="HEM2301677.1"
                     /translation="MKKTVGEVVAMLDSSIHVDAFRDVVITGVCFDTRQIKSGDLFVP
                     FVGNVRDGHEFVSQAREMGAVATFWQKDVPNPPMDFPVILVEDTLLALQELAAKYIQQ
                     VKPKVIAITGSNGKTTTKDIMAAIVETTYKVHYTGGNFNNHIGLPYTILTMPEDTEVA
                     VLEMGMNHRHEIEVLSKIAKPDIAIITNIGEAHIEYLGSREEIAKAKLEITAGLNPSG
                     ILIYPHEETLLLGNINGDFRQLTFGKSEAAEIYPLEIRAEAEGTSFITNWEPELEIFV
                     PIIGEHNVFNTMAAMLAAREIGIEGEKIQSALKNMERSKSRLEWITTKSGARILNDAY
                     NSSPTALKTVLKTFMHMDSSGKPKYLVLADMLELGDLSTKLHQESAEVLEKGMIEKIF
                     LYGEAMKAFGDIAEAKIGQGKVHHFNTKESLETALLSEMNGNEWILVKGSYGMGLKDV
                     VENLIIK"
     gene            complement(13941..15053)
                     /locus_tag="U0290_001634"
     CDS             complement(13941..15053)
                     /locus_tag="U0290_001634"
                     /EC_number="6.3.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464381.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--D-alanine ligase"
                     /protein_id="HEM2301678.1"
                     /translation="MKTKLILLYGGKSAEHEVSLQTAFSVINALDLEKFEAAPIYITN
                     EGEWIQGPLLSGKLDFVEQLRFSATDTIKLATTESEKSEGEAISPAVLEADGQETVVF
                     PLLHGPNGEDGTVQGLFEVLNIPYVGNGVLASSAAMDKIVMKKIFADAGIPQVPAVAV
                     RLIDWKNYQAEMVAEMEEVLTYPVFVKPANLGSSVGISKATNKKELADAMTEAFLYDR
                     RVVVEQGVVAREIEMGVLGNDTPVCSVPGEILPEGAVATFYDYKAKYQDNNTALIIPT
                     EVDPEILEQMKEYAVQAFLGLDASGLVRADFFLTEDNQLFLNEVNTMPGFTPYSMYPL
                     LWQETGLPYGALIERLVDLAKERHAAKNALKYKLED"
     gene            complement(15203..15523)
                     /locus_tag="U0290_001635"
     CDS             complement(15203..15523)
                     /locus_tag="U0290_001635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464380.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEM2301679.1"
                     /translation="MDWIFLLVAGLCEMVFVVMLKLSDGFKKVGYAILTIIFMSASFF
                     LLSLALKTIPIGTGYAIWTGIGAVGSVTLGMIVFKERKSVGKLLFITMIIAGVVGLKL
                     TSGV"
     gene            complement(15526..15867)
                     /locus_tag="U0290_001636"
     CDS             complement(15526..15867)
                     /locus_tag="U0290_001636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux SMR transporter"
                     /protein_id="HEM2301680.1"
                     /translation="MAWFYLIMAGLSEIVWAFGLKESHGFTMLGWSLLTIAFLIVSFG
                     LFSISMKSIPIGTAYAVFTGIGAAGTAIIGMIFLSEGVSFWKIVSLIVLLTGIIGLKL
                     VDGNESEKEAK"
     gene            complement(15884..16438)
                     /locus_tag="U0290_001637"
     CDS             complement(15884..16438)
                     /locus_tag="U0290_001637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2301681.1"
                     /translation="MTKKLIKEVALTLFAEKGYDGTALSEIAKAVGIKTPSLYAHFAS
                     KEALFLEVYQDSIQMELTELGKVAERDDLVGEKKLQSIFFVATDFSSNPDEKKFFQRA
                     VFYPPKSLFQELKEETKTYEQLTNRILRETLEKIVSEEALVRWMHVFYALLDGLSVEH
                     GIYDETEFELRRKSAWAVLASLLK"
     gene            complement(16518..>17267)
                     /locus_tag="U0290_001638"
     CDS             complement(16518..>17267)
                     /locus_tag="U0290_001638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464377.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301682.1"
                     /translation="EAVNQQSIYVHIDHVINNVATSGISFCDFLNGVGQPPENILLIK
                     HNIEDASYNAHTAFHYLEPGDLANISKENFNPLCWIDFEDVELLNQLTPQEVAEMLYL
                     AHTGRHLRSPFYYKLQNNFVYLTREDGRYNKVYYRNLNHFYMLLSYVIARKTAELVNE
                     KGIFSFGKKKYVAEPPVELLKKMADHFKDGACIALDDVVRTRTQIEVPIGHGLTEEMT
                     ELEISSKIYYEEEVAKLVYDLKQNEWKYIEK"
BASE COUNT         5103 a         3864 c         2867 g         5433 t
ORIGIN      
        1 acaatgaagt aagtccaacc taaaacgatg attgctacta caatatattc gataattttg
       61 tttatcttca tgacgagcgc cacactcccg tatccttaac attagtattt ataaaaaaat
      121 agactgtaga taaagttaaa aacttcttta tctacagtct atctatatgg taactatttg
      181 tctaataatc ttatttagat ttttgtgagt agttgccttt gttgccgccg ctgcgttgtt
      241 ctccgccgcc actacgacga tcacgattgc caccaccgcc agaaccgctt ccgccgccgc
      301 tacgacgacc tttgccgctg ttgttacgat cgcggtagct tccgcctttg ccgcttccgc
      361 cgcgatagcc gccacctttg ccgcctttac catttttacc tttgtagcca ccgccaccac
      421 gggatggtaa tggacgctct tcagtaatat ggacaggagt tttgtctggc tctttcgcta
      481 acattttaag cattgctgct gcgatgtcag ttgcatcgta tttttcaaga agttcgttag
      541 caaacgtttt gtagtcagct aagttttctt ctgtgattgc ttcttgaatt ttttcagttg
      601 ctacgcgtaa ttggcctgca aatgcttcgt cccaagtagg agcttgaagt ggttgcatac
      661 gttttttcgt agtttcttcc acaatacgta aataacccat ttcacgaggt tgtacgaaag
      721 taatcgccat accttcttta ccagcacgac cagtacgacc gatacggtga acatagcttt
      781 ctggatcttg tggaatatca tagttatata catgtgttac gccggaaata tcaagtccac
      841 gagctgctac gtctgttgca actagaacat caatttttcc ttctttaaat ttgcgtagta
      901 cactcatacg ttttgcttgc gtcaagtcac cgtggatacc ttcagccacg taaccacgca
      961 tatcaagcgc gcgagatagt tcgtctacac gacgtttcgt acgaccgaaa acaatagcta
     1021 gttccggtgc ttgaacgtct aataaacgag ataatacgtc aaatttttct ttttcatgca
     1081 cttttacgaa gaattgttca attaatagtg cagtcatttc tttcgcttta atgcgaataa
     1141 gttctgggct atgcatgaaa cgttcaccga tacggcgaat tggatcaggc attgttgcag
     1201 aaaatagtaa agtttgacgt tctgctggta cttcttttag aatagtttcg atatcatcaa
     1261 tgaagcccat gtttagcatt tcgtctgctt catctagtac aagtgtttcc acgtggtcta
     1321 gtttcagtgt gcgacggtta atatgatcca aaatacgtcc tggcgtacca actacgattt
     1381 gtgggttttt cttaagtgaa cggatttgac ggctgatatc gctaccaccg taaaccgcta
     1441 gcacacgtac atgtttgtca tagctaagtt tataaagctc ttcagaaact tggattgcaa
     1501 gttcacgtgt tggagcaata attaaagctt gtacgttgtt actcttttgg tcaattttgt
     1561 gaatcattgg aagaccaaaa gcggctgttt taccagtacc tgtttgtgct tgcccgatta
     1621 agtctttacc tgctagtcct agtggaattg tcttttcttg gattggtgtt gcttcttcaa
     1681 accccatccg atttactgat tttacaattt tttcgtccag tccgaactcc gaaaattttg
     1741 tcaatgtcat ttctccttta cctgtttaaa gtttggtagg agagctactt ttataattca
     1801 tcacaatacg cttattacga ttgtttgtct gttcatttgc agttgttttt atgaaaactg
     1861 ctatctttca ttttcatttt tctgcaatag aaaagcctgg gcgcaccaag caaaatgatt
     1921 cacggcatca gaaaatttct ctgccattat agcagttcta acgcatcaaa taaaaaagcc
     1981 ctcattaatc actaggctaa atataaacct aataaacttc catctatcat cataacacac
     2041 taacgatttc ttttcaacgt caaaagctta tctttccttg ctattatcga ataaaaaaac
     2101 ttaattcttt ttaaatgtac gcttatccgg gtttttcagc gatttttata gataaatctt
     2161 taaaaaaaag ctgaaaatcg tccgaaaaca atttccagct ttttattaat cccatttggc
     2221 taaaacgcat tttttcaact catccatagc ttttgtcgct atttcttctg tttgaccgat
     2281 tgtttggaaa tagattttgc atttcggttc cgttccagaa ggacgtattg caaaccaggc
     2341 gttatcgttt aagtaaaatt ttaaaacatt ttcttttggt agctctatgt ttgtcatttc
     2401 catcgttgaa agattggttc gcttactcgt tagaaagtct tctaaaaccg ttatgccggg
     2461 aatacaagtt ggctctttgc gcaaatcgtc tatcacttga ttcattttag ttgttccatc
     2521 gctatcatct agcgtaatcg tgtgcaagtg ttctttatga tagccgaact tttcatataa
     2581 atttgttagt ttttgaagaa gtgttgttcc ttctttttta tagaaaaggg ccatttctgc
     2641 tgtaagtaat gctgcctgaa cggcgtcctt gtcccgaaca aatggcgcga ttaaataacc
     2701 gtaactttcc tcgtatccaa aaagaaagtt tttttccgtg ccttccattt cggctatttt
     2761 ttcaccgata aatttgaaac ccgtgagcgt ctggatatga ttaattccaa agtcatgcgc
     2821 gattcttcca cctaagtccc cagtaacaat tgtattaatc atcgtatccg cctgagttac
     2881 cgacgttttg gcttctaaaa tatactgtaa aagcaatgcg cctagctgat tccctgttaa
     2941 aatttgatac gtagcttgct tgtttaaaac agctaccccc agcctatcag catccggatc
     3001 tgtcgccaaa ataatatcgg cttgtatttc tttcgcctgc tttttggcta gttcaaaact
     3061 gttttcttct tctggattag gcgaaaccac tgtcggaaaa tccccgtcag gctcactttg
     3121 ctcagcaatc atggtcgttt ccgaaaatcc attttccaaa agcccacgca taacaagttc
     3181 ttttccagct ccatgaagcg gtgtgtagca aatctgtagt tcattaccgt agtcagcaag
     3241 caaatcaggg cgagaaacga ctgctgttaa agcttttaaa taagcatcgt ccatttcttt
     3301 tcctagcgtc ataacgagtg gattgggtaa ttcgcgcact ggtatggtaa agatatccgt
     3361 tgtgttttct aaatagccag caatttcctg cgctacaccc aatgtgattt gacagccatt
     3421 tttatcatat actttgaaac cattatagat agaaggattg tggcttgctg taatcacaac
     3481 gcccgcaaat gccccctttt ctcgaacgca aaaagatagc gctggtgttg ggcgaatcgt
     3541 atcggataaa taaactttga ctccctgcgc cgccaggacc tttgccgtat cctgcgcaaa
     3601 agcacccgaa tgatgtctcg agtcatacgc aatcgcaaca cccatttcgg ctcctccatt
     3661 cgcgacaaca taatctccca aacctttcgc tactcgtcta atggtaaaaa gattgatgcg
     3721 cttcgttcca acgcccattt taccgcgcat cccgccagtc ccaaaggtta aataaccatc
     3781 aaatcgttcc tgctcctgtt ccactcgttg taattcacgg cgccactcat ctgataaatc
     3841 ggcattttgc caagcgttca aatgttgttg ccaagtcatt tgttttccac ttctaactga
     3901 tgtagaattt cgctgatttt catgtcacag cccgccatag aagtatccgc cacgccgtaa
     3961 tacatatgca gcgtatcacc ttcttgaatg gccccacatg cgaaaacaac atcaccgaaa
     4021 aagccatttt tctcataatc ggcaactggc tctaaaatag gcgttttcgt tcttttcagt
     4081 acaatcgttg ggtcgtttaa atcaagaagc gccgcgccca tcacgtaacg attctcttca
     4141 gttgctccgt gatataaaat taaccaacct tcttctgttt taatcggcac acatccgccg
     4201 ccaactcggc cactatcata ttcaccagga cgaattccaa gcaaatgacg atgatcgcca
     4261 aaactgcgca aatctggaga agaagcaatc caaatatcta aattaccaat acttttcaaa
     4321 cttggacgat gtaaggcata atattttccg ttaatttttt ctgggaaaat tagtacatct
     4381 ttattttcag gagcaaagat atttccttga tactccaaat tttcaaagtc ttttgtggtc
     4441 actaatgcat ccgctacgcc aaactcagat accgcactaa aattcacgtg atatgtatcc
     4501 ccgatttgcg tcacacgagc atcttcaatc ccaaatgtct gatactcatt aaacggatat
     4561 aaaaacggtt tttcatctaa ggtaaactga tgaccatctt tactacgagc aattcgaata
     4621 tatgaaagag aagttaaata agaaaatcct tctagttttg ctttactgcg aatcattcgc
     4681 ggatcttcaa aatcataatt ttcatcatct aatcggaatt gttgtaattc taattcttta
     4741 cttttcgcat tataaactgg cgcaaggact acttctggat cctcactgac tggtttttct
     4801 gccacacgaa gaagtaaaag tacttcgccg ttatattcgg caacaccagc gttaaaagcg
     4861 ccaatcactt caaaaccttc atggattggt tttacgtcca aaggtgtaat taatgggttt
     4921 tcttcataac gataaatgtt catttctact caaaactcct actattagtt atttttaaat
     4981 ggatcaggaa ttgctaattt ttgtgcatca gaatcgccaa tccctgcata aagtgtcgca
     5041 gtaccgtccg aatttctgat taacccaccg ctaaatacaa catccgctaa atcaggtctt
     5101 ttcggctcac taggggcaaa attagcacgt tcggcaatta ttttttcttg ctcaatttgc
     5161 gaaaaatctt cattcaatcg aaaagaacat gcgtaataat gacgattgcc cgcttcatca
     5221 aaacaagcaa tatgaccaag cacgccaatt ctctcatctt ctaacaaatg aagctcattt
     5281 ccgccacccc attcctctcc tgaaaaattc cgtttcaaaa gtggtgcagc ttctattttc
     5341 tctattgtta attctgccag tgagtcaatg acgattgcgc cgattttccc gcgaccgccc
     5401 ttttcgcctt gaggtcttgt taatactaaa atacgtccat cagccaattc tttgatacgt
     5461 aaatctttca taccaattgg cccggcaaga atttgttcaa aatcagtaag cgaggttgcc
     5521 cgatataaat tagtacgcca atctaacata gtcgggtccg tttctttcgg aaaaacttct
     5581 accccgccaa taatcagctc accctgaaca aatgtaacaa atggatcttg tagcgctaaa
     5641 acagtcgtat tttcaaccaa ttgatatttg tccgtctcta ttttttcaaa aaagcgtact
     5701 tccgaaaact cgctatcacg cgactccact cgacctgcaa tatattcttt cccaagccaa
     5761 tgaaatggtg ccgtaatatt gtatacatct ttgtcgccag caccatttaa cgtgatacgt
     5821 gtcccaaacg cagcactatt ttcccggtaa acttgcaaca aattttcgat tgtattcatt
     5881 ctattcctcc actctaagcg caattccagt atgcgcgccc attctaatgc catttcctac
     5941 catcactgct tctccaaaaa caagctgata gttcccctga agcggataag ttacctcttc
     6001 ctcaccaaaa tgaagtaaaa agataaattc acctcgctga taactgagta cttctccatc
     6061 caacttcaaa aaagtatatt ccatctcttt aaaatcattt tctttacgaa atgcgagtaa
     6121 tccttgataa aatcgccaca tcgttcgtgc ttctttttcc ggcaaagtcg ccattttaat
     6181 ccatggttca cctagagtaa atggctttcc atctgggaaa atcatcggcc cacgtgcttt
     6241 gtcacgcgtt ttttcaatag cgatttcgag tgcttgtttt tcatctgaac cagtttgtaa
     6301 agcttgatag tacgcggctg tcccttgaat atcgcgcatc tcttttacgg aagaaaacgt
     6361 taaatcaggc atacccacct cttctccgta gtatataaac ggcacgcctt tcgcagttaa
     6421 cattaaaaat gcgagcaact gggtctttac tatgtctcca gatgcgaggc gacttctgaa
     6481 cctgctcata tcatgacttc caaagaaaag cgtcggccac tgcccttcat ttaatgccgt
     6541 ttccatctca ttcaatgtcg taaatacaga ttttgcatct agctgatcaa cactgccaaa
     6601 attaaaatta aatgtgacat ctagcatttt tttcgagcta tatctagcaa tttcagctaa
     6661 ttggtccgag ctaatttcgc ctactaaaaa cacgtcgcgc tcttttcgac aaaaggaagc
     6721 gatatcctct aacgcttgtt ctaagccact ctgattacgg tcatacacat gctccatttc
     6781 accagatgtg actggattat ccgtaaattc aagtacgagc gttaaattat tgataacatc
     6841 taacctgaat cccgccactc cctcattcaa ccaaaacgct aaaacttgct ccatttctgc
     6901 gcgaacagct tcattcgccc agtttaagtc agcctgttct tttgcaaaac tatgatagta
     6961 atactcgcca gtaagttcat ccatttccca agcagaacca ccaaaaaacg attcccaatt
     7021 atttggtttt tctcgccaaa tataataatc tcgtttagga ttcgtcttac tactacgcga
     7081 ctccttaaac caagcatgct ctgttgacga atgatttaat actaagtcga taataacttt
     7141 tattcctcga gcatctgccg ctttcataaa cgctcgaaaa tcagtcatat cgccgtaatc
     7201 cgggttaata tcgcagtaat cagacacatc ataaccatta tccacttgcg gtgaaggata
     7261 aaatggagtc aaccaaatac catcaatccc caaatccact agataatcta atctgctcgt
     7321 taaaccttta aaatcaccta aaccatcgcc attactatct tgaaatgatt tcatataaat
     7381 ttcataaaac acactacgac gccaaaattc caagttcagt cgctcctttt atttcaaagt
     7441 aaattgcatt ccttcttgga atttcttcga gaagaataag aacaagataa taagtggaag
     7501 tgttagtaac acagatgccg catacattgg cccaggatag gttgcatatg gtccaaacat
     7561 ttgcgagatt agcacattca atgtgaccgt tccatcactc ttcgttacaa gcatatccca
     7621 aagtaaattc gtccatctgt ctgtgaaaag gaataagaaa ataacggtcg taattgattt
     7681 agacattggc agcacaaccc gaaacaaaat cttcaaatca ctcgccccgt ccagtttggc
     7741 agcttcaatt aatgtatctg gaatcgcttt gaaaaagttg gtatacataa atacagccca
     7801 taagctaagc atagtcggga taatcattcc cgcataggta tccaataaac caaagtccgt
     7861 aatcattaaa aactgcggaa tcagcaagat gattgccgga aaaaacattt gaaataaaat
     7921 cgcattatta acaattttct tgcccttaaa atccactttt gctagtgcgt agcctaccat
     7981 taggccgaaa agcaacatca agcctgtcgc aatggtggaa acaataattg tattaataaa
     8041 cgcatgaatc cacggcgccg gtgccgcaac aactgaatta ccaaataacc aatcccacga
     8101 acgagtagtg aattctgtag gaatcaactt tttatctacc tgatcccaag cagcaaatga
     8161 gtttaatact aaataaataa aaggataaat catgactagc ataagtaatg ttgtcagtat
     8221 atagcgaaca attttacccg ctttactatt atgtccaacc atttctttga ccccatttct
     8281 caagcatttt cttaataaca ccaatcgatg caaatgttac agtagcagcc attagagaaa
     8341 tcgctgaagc ataaccagaa ttcaagttaa cgaatgcttg gttaaaaatt tccatttgcc
     8401 atgtatttgt tgcaaagttc ggtccaccac cagtcaattg gtaaacttcg gtgaaaatcc
     8461 caaaactaac gcttaccgct aaaacaatta cggtaaataa agctggatat agcatcggaa
     8521 cagtgacttt ccaaaatgtt ctaaatctac cagaaccatc cattgctgca gcttcataaa
     8581 tttcatgatt aatgctagca agtccagaaa ttaaaatgag cgcatagtaa ccagacattt
     8641 tccaagctat cattagtgaa ataataacga gcgccgacat tggtgtcccg agccaatcga
     8701 tatcccaacc aaaatgcccg cgtaaaaaca cattcagcgc actattgtat gaaagtaacc
     8761 cttgcacaat aagcgaagtt acaacgcctg aagacaaata cggtaggaaa aacgcaacca
     8821 gataaagtcc tttaaatttc ggcaagccgt tcactaatac cgcgacaatc atcgaaataa
     8881 ttaacgccat aggaacaaaa acaatcaaaa atttataagt aacaaaaaag gctgcttgaa
     8941 ctgctggact agtaaacgct ttaataaaat tatcaaagcc aacaaaatta atttccggac
     9001 tcatcatgtt ccaatcagtt acagataacc aaatcgacca aacaagcggt actaagaaaa
     9061 atatcgcagt gaatatgaga tacgggctgg taaatgacca gcccaatttg ttatttcgcc
     9121 gcttcattct tgaagcaccc cgtcctccgc tttcttcata tctgaccaag ctttagcagg
     9181 ttttttctcc ccgcgtacaa tcggattcca cgcttcttca ccaatgattt gttgaatatc
     9241 attatatttt gcgtcatcca tcgcagggat actatatggt acattagctg cataaacttc
     9301 gagttctgga ttttctttaa agaatgctgt gaaagtttcg ttttctgttg catcatcacg
     9361 cgcaggaatt aagttagttg tttctaagaa tttcaagtca tttttgtcat cgttataaac
     9421 aaatttcaag aaatccattg ctgcttcttt ttctttatct gtcgcttgtg catacattac
     9481 aacgcctttc gaatcagcgt atgtagcaac attttcttca ttcgccatgt tatctggtac
     9541 tagtggcgct gtgattgcat agttttcgtt atatttaagt tccgggaatt tttcatccca
     9601 gttagggaaa gtccacgggc cattatctgc catgatgctt gttccagttt caaatggatc
     9661 tgttgcttta cttgcaagaa gtaatttgtt tttttgcaat tcggacataa atgttaataa
     9721 ctctgttcca gctttatcgt ctgctactaa tttgccatct tctacaaatg catttccttt
     9781 agaagctgca tcataaagtg ggaagaaatc aaaccagcgc atccaagcag ttggatcaga
     9841 taaatcacct tttgcccaaa gaactttgtc tggatatttc gcttttaatt ttttaccaac
     9901 ttcaagcgct tcactatatg tttttggcgg tgcatcatag ccaagttctt tcagtgtatc
     9961 taaacgccaa gcaaaaagaa ttggattgga gtaaactggt agcacatatt ggtttccgtc
    10021 agagaatttc caagaatcca ttgtttcgct catgtttcgt tctttgacaa catcatcaag
    10081 tccttttaca tcgttcaaag ggacaatcgc tttactgtca gctaattgtg cagcgaaact
    10141 acgattgata ttttcagaca tggttggtgc cgttttagag gcaatagctg attggatagt
    10201 tgcttccgaa gatgggcttt ctttcatttg ggaaacttca atcgttacat ctggattttc
    10261 tttttcataa gcttttgcca tttcatccca atattttact tgcgttggat ttggagctgc
    10321 ccaaaacgtt acttttgttt taccattatc gtcacttttg ctgtttccac caccacaagc
    10381 agtaagtaat gacccagcaa ccacaacact aagagctgca atagcaattt ttctaatctt
    10441 catatcaata atcctcctaa ttccactttt tgtaattgta agcgcttgat tacgattaca
    10501 ttatcacatt acatttttgt aatgtcaata attactttta taaaacctaa taaaattgag
    10561 gttaatttac ccataaaaca aaaatgaata gaattacttt ctacattact ttttaattat
    10621 aaaatttttg ctattttgtg aatttacttc tataatagaa taaatagagg aaaacggagg
    10681 ggaaccatga agaaagttac gatgcaggat attgctgaca ggctaaatat aaccaagaat
    10741 tcagtctcgc aagctttagg caataaaaat ggggttagcg aacaaactaa actagccgtt
    10801 tttaagatgg cagatgagct aggctataaa tataaaagag aaatcgcgcg tgaggttgtg
    10861 aaagaaaaat ttgcgctttt agcaacttct ttcgcccttt cgcagcgcag tttttttggc
    10921 gaaattatcg ataatatgaa acaaagcatt atcgctcacc aagccgaact tattattttt
    10981 ccagttacgg atgaggaagc gtctactaat caattaccag agcagctcac aagcgagaac
    11041 tggactggga ttttcttact ttcgcatata aacacggatt atagtaaaaa agttatcgat
    11101 ctcggcatgc ccgttgtgct tatagatcat catgatccgc atctaaaagc cgacgcggtt
    11161 atcagtcaaa ataaagatgg tgcttttatg gctgtagaat ttttaattca aaataagcat
    11221 cagaaaatcg gttttctcgg tgatgttact ttctctccaa gttatgaaga gcggctagaa
    11281 ggatacaaaa aagctttgca ctactatcac attcctttta acgaaaaata cgccatcact
    11341 cgtatcaaag aagaacaaac gacattatat agaactttag atgaactgga cgaactccct
    11401 actgcttggt tttgtgtcaa ctcaggactt gggtttattc tcaatactta tttgcaatca
    11461 aaaggctata atatccctaa tgacttatcg attatttgct ttgataatac cgagtttact
    11521 gtactaagca atccacagct aactacaatg tgtaccaacc taagctatat gggtgagaag
    11581 gctgtcgaac tcatgtataa tcgcataaga aaaccagatg aagggtttgt tcatctggcg
    11641 cttgctacta atttaatagc ccgagattct gttggtgaaa acaaaaaagc cgattcagcg
    11701 agtgaaagct gaatcggttt tctttattga gcatttaaaa cagcgacatc tttttgcaaa
    11761 aatgttaaaa cagctgcaaa taatttgtcc gcttgttcgt cctgacaaat cacgtgtttc
    11821 gaaccttcta atataaataa ttcttttgga ccaggaatac tttccattaa gaaattaaca
    11881 cttttttcag caggaactac ttggtcggca ctgccttgtg caataaaagt tggaatttca
    11941 atatgctcaa aaaccggctt tgctaaagct accatttttt tgaattgtag cgtggaagtc
    12001 caaggcgttt ccgttacttt cttttgataa cgtttgaaca tcgggctgtt tttgagcgtt
    12061 acttcttttg cttccgttaa tacttgcttg gaattttcga caagttgcgg ccattccatt
    12121 gcatttacgg ctgtgctcag aagtactagt ttttttactt ccggataatg tctcgcgagc
    12181 catccagcga gcagtccacc catggaaaaa ccaataatat atacttcatc gtcttctttt
    12241 agcatttggc ttaaaatact atctacaaaa acaatccaat ctttatacgt cacatttttt
    12301 aagtggcgca ggtgatcatg gccaggtaat gtgggtgcta aaacatccca atctgtatgc
    12361 tctcgcaaat agtcagcgag cggcttcacc tcggacggcg aaccagtaaa accatgaata
    12421 cacaaacaag caaccattat gcctttcctc ctgtccaaat tattaccaat taagcggtaa
    12481 tatgttctgt ccaattttag tcgttactta ataataagat tttctaccac atctttcaag
    12541 cccattccgt aagaaccttt gaccagtatc cattcatttc cattcatttc tgaaagaagc
    12601 gccgtctcaa gcgattcttt cgtgttaaaa tgatgaactt ttccctgacc aattttggct
    12661 tccgctatgt caccaaaagc tttcatcgcc tcaccataca agaaaatctt ctcaatcata
    12721 cccttttcta atacttcggc tgattcttga tgtaactttg tcgacaaatc tccaagttcc
    12781 aacatatcag caaggaccaa atatttaggt ttgccgctcg aatccatatg cataaatgtt
    12841 tttaaaaccg tttttaatgc tgttggacta gagttataag cgtcattcaa aatacgcgcg
    12901 ccacttttcg ttgtaatcca ttctaaacga cttttagaac gttccatatt tttcagcgca
    12961 gattgaattt tttcaccttc aattccaatt tctcttgccg caagcatcgc cgccattgta
    13021 ttgaaaacat tatgttcacc aataataggg acaaaaattt ctagctccgg ctcccaatta
    13081 gttataaaag aagtgccttc cgcttccgca cgaatttcta acggataaat ttccgcagct
    13141 tccgacttac caaaagtaag ttgtctgaaa tcgccattaa tatttcctag cagcaaagtt
    13201 tcttcgtgcg gataaattaa aatcccgctt ggattaagcc cggcagtaat ttccagtttt
    13261 gctttggcaa tttcttcacg cgaaccaaga tattcaatat gcgcctcgcc gatattcgta
    13321 ataatcgcga tatcgggttt ggcaattttg gaaagcactt cgatttcatg acgatgattc
    13381 atgcccattt caagtacagc aacttcggta tcttctggca tcgttaaaat ggtgtacggt
    13441 aagccgatat gattattaaa attcccacca gtataatgca ctttgtacgt tgtttctaca
    13501 atcgctgcca ttatatcttt tgtcgtcgtt ttaccattgc ttccggtaat cgcaataact
    13561 tttggcttta cttgttggat atatttcgcc gctagttctt gaagtgcgag caaagtatct
    13621 tctactaaaa taaccgggaa atccatcggt ggattgggta catctttttg ccagaaagta
    13681 gccactgcac ccatttctcg cgcttgactc acaaattcat gtccatcgcg tacattccca
    13741 acaaatggaa caaataaatc ccctgacttt atttgccttg tatcaaaaca aacgccagta
    13801 atgacgacat cgcgaaatgc atctacatgg atggaactat ctaacattgc tactacttcg
    13861 cctactgttt ttttcaaatt aaatctctct cttccataaa aaagcagctt ccgcatatga
    13921 aaactgcttt cttgtttatt ttagtcttct aatttatatt taagtgcatt tttggctgcg
    13981 tggcgttctt tcgctaaatc gactaatcgt tcaattaacg ctccgtaagg taagcccgtt
    14041 tcctgccaaa gaagaggata catgctgtac ggtgtgaaac caggcattgt attcacttca
    14101 tttaagaata actgattatc ttccgttaag aaaaagtccg ctcgcactag tccgcttgca
    14161 tcaagcccta ggaatgcttg aaccgcatat tctttcattt gttccaagat ttccggatct
    14221 acttcagtcg gaataattaa cgcagtatta ttatcctggt attttgcttt gtaatcgtaa
    14281 aacgtagcaa ctgcaccttc tggcaaaatt tcacccggaa cagagcaaac tggcgtatca
    14341 tttccaagta cgcccatttc gatttcgcgc gcaacaacac cttgttcaac aaccacacga
    14401 cggtcatata aaaatgcttc tgtcattgcg tccgctaatt cttttttgtt cgttgcctta
    14461 ctaataccaa cactcgaacc aaggtttgct ggttttacga aaactggata ggtaagtact
    14521 tcttccatct ccgcaaccat ttccgcttga tagttcttcc aatcaattaa tcgaacagca
    14581 actgctggaa cttgcgggat tccagcatct gcaaagattt tcttcatcac gattttgtcc
    14641 attgcagcag aagatgccaa gaccccgtta ccaacatatg gaatgtttaa tacttcgaac
    14701 aatccttgaa cagtgccatc ttctccgttt ggaccatgta aaagcgggaa tacgactgtc
    14761 tcttgtccgt ctgcttctaa aacggccggg ctaatcgctt ccccttctga tttttctgat
    14821 tcagttgttg caagttttat tgtatctgta gccgaaaaac gtaattgttc aacaaaatct
    14881 aacttcccag aaagaagtgg tccttgaatc cactcacctt cattcgtaat atatattggc
    14941 gcagcttcga atttttctaa atccaaagca ttgataactg aaaatgctgt ttgtaaggaa
    15001 acttcgtgtt cagcagattt cccaccgtat aacaaaatta atttggtttt cataataccc
    15061 ctccgtcatt attcgcttta tctattttac catgttttga caggatgaaa aggtataact
    15121 aaaaaatagg ttgaaaaaat cttctttttt aaataagaac cgtgcacgct tattccaaaa
    15181 aggacttttt caacctaaaa tattaaacac cagatgttaa tttcaaaccg accacgccgg
    15241 caataatcat cgtaataaag agcaatttgc cgacactttt acgttcttta aaaacaatca
    15301 ttccaagtgt cacactacca acggcaccaa ttccggtcca aatcgcataa cctgtaccga
    15361 ttggaatcgt cttaagcgcg agggatagta aaaagaaact tgcagacata aaaataatcg
    15421 tcagtatcgc atatccaacc tttttaaagc catctgataa ttttagcatg acaacgaaga
    15481 ccatttcgca taaacctgct acgagtaaaa atatccaatc catcgttatt tagcctcctt
    15541 ttcagactca ttgccgtcca ctaatttcaa accaataatc cctgttaata atacgataag
    15601 cgaaacaatc ttccaaaaag aaacaccttc tgaaaggaaa atcatcccaa taatcgctgt
    15661 cccagcagcc ccaattccag taaaaaccgc atacgccgtc ccaattggaa tggacttcat
    15721 ggaaatcgaa aacaaaccaa aactaactat caaaaatgct atcgtcaaaa ggctccaccc
    15781 taacatcgtg aaaccatgcg attcttttag tccaaaagcc caaacaattt ctgataatcc
    15841 tgccataatt aaataaaacc aagccaattt ccttacctcc aattcatttg agtaaacttg
    15901 cgagaactgc ccaagcagat tttcttcgca actcaaattc cgtttcatca taaatgccgt
    15961 gttccacact cagtccatca agaagtgcat aaaaaacgtg catccatctt acaagtgctt
    16021 cttcggatac tattttttct aacgtttcgc gtaatatccg attcgtcagt tgttcatatg
    16081 tctttgtttc ttcctttaat tcttgaaaaa gcgacttagg tggataaaag acggcacgct
    16141 ggaaaaattt cttttcatca ggattgctag aaaaatctgt cgctacaaag aaaatagatt
    16201 gtagcttctt ttccccaacc aaatcatctc gctctgctac tttccctagt tctgttaatt
    16261 ccatctgaat actatcttga taaacttcta aaaatagggc ttcttttgat gcaaaatggg
    16321 catataacga tggtgtttta attccaacag ctttcgcgat ttccgaaagc gctgttccat
    16381 catagccttt ttctgcaaaa agagttaatg cgacttcttt gattagcttt ttcgtcataa
    16441 agcaccctcc taactaacgt tcattagtta aattttaaca aataaaaaac caaacgtaaa
    16501 ggaaaaagtt tgatttttta tttttcgata tatttccatt cattttgttt taaatcatac
    16561 actaattttg caacttcttc ttcataataa atcttagaag agatttctag ttctgtcatt
    16621 tcttctgtga gtccatgccc aattggtact tcgatttgtg tgcgcgttct cacgacatca
    16681 tcgagcgcaa tacaagcacc gtctttaaaa tgatctgcca tttttttcaa aagttcaact
    16741 ggcggctccg caacatattt tttcttacca aacgaaaaaa tacccttctc attaactagt
    16801 tctgccgttt tacgtgcaat gacgtaactt agtaacatat aaaaatgatt aagattccga
    16861 taatatactt tattgtaacg accgtcttcc ctagttaagt aaacaaaatt attttgtaat
    16921 ttataataaa atggtgagcg caaatgacgc ccagtatgtg caagataaag catttccgct
    16981 acttcttgtg gggttagttg gttcaaaagt tctacatctt caaaatcaat ccaacacagt
    17041 ggattaaaat tctctttgga aatatttgct aaatcgcctg gctctaagta gtgaaaagct
    17101 gtgtgtgcat tgtaggatgc gtcttcaata ttatgcttaa ttaacaaaat attttcaggg
    17161 ggctgtccca cgccatttaa gaaatcacaa aaagaaatgc cgcttgtcgc cacattatta
    17221 ataacatgat caatatgcac ataaatagat tgttggttaa ccgcttc
//
LOCUS       DASDYO010000060        17017 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.060, whole genome shotgun sequence.
ACCESSION   DASDYO010000060 DASDYO010000000
VERSION     DASDYO010000060.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 17017)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 17017)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..17017
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.060"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            170..1276
                     /gene="qoxA"
                     /locus_tag="U0290_001639"
     CDS             170..1276
                     /gene="qoxA"
                     /locus_tag="U0290_001639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit II"
                     /protein_id="HEM2301683.1"
                     /translation="MSKVLKSLLLTALLGVTGLISGCGDLTVLNPKGPVAKGQSDLII
                     YSIIFMLVIVLTIFVLFTIMLVKYRERKDISNYEPDMHGSKKLEIFWTLIPVAIVIAL
                     AIPTVKTIYAGEEAPKVTSHKDPIVIYATSADWKWIFSYPDESIETVNYVNIPTDRPV
                     LFKLTSADTMTSFWVPQLGGQKYAMSGMTMNLYLQADEVGTYKGRNANFNGEGFADQR
                     FDVVAQSEKDFKKWAKETKASSPVITQDIYDRLLIPGSSKKKTYSGTHLAFVDVAADP
                     EYVFYAYKRFGYEMTNPHNPNTKSTISDEPMLPVRPVTVTNPQFERHDMKPQIIKNGE
                     GYHEDKHREDEMKKMEEDIQTNEFNKKESDDAGK"
     gene            1295..3274
                     /gene="qoxB"
                     /locus_tag="U0290_001640"
     CDS             1295..3274
                     /gene="qoxB"
                     /locus_tag="U0290_001640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit I"
                     /protein_id="HEM2301684.1"
                     /translation="MKWNEFIVTGDPMILGAQISIVLVSIGVVALLTYTKKWKWLMKE
                     WISSVDHKKIGIMYLLAAVLMFFRGGVDALMMRTQLALPDMKFLDAQHYNEVFSTHGT
                     IMILFMAMPFIIGLMNIAVPLQIGARDVAFPFLNNLSFWTFFMGAMLFNLSFVIGGSP
                     DAGWTNYAPLATDFSAGYGINFYLLGVQIAGIGTLMTGINFFVTILRMRTKGMTLMKM
                     PMFTWSSLITSLIIIFAFPVLTVALALMSFDRLFGTAFFTLTNGGLPMMWANLFWVWG
                     HPEVYIVILPAFGIFSEIISTFSRKKLFGYPAMVAAMAVISLLSFLVWVHHFFTMGSG
                     ALVNSFFSITTMMIAIPTGIKIFNWLFTMYKGRITFTTPMLWSLAFIPNFVVGGVTGV
                     MLAMAAADYQYHNTYFLVSHFHYVLIAGTVFSCFAGLTYWYPKMVGYRLNEKIGKWFF
                     WIFVVGFNVCFFPQYFLGLDGMPRRIYTYVQGDGWTTLNFISTVGGFLMGVAFLVLCY
                     NIYYSYKNSKREVTGDPWDARTLEWATSSAVPPKYNFAVLPEWNDLDDFWNRKQKGDP
                     YVNDKNYKPIHMPSNTMVGFVMSVFFFIAGFGLVFYWYWMGIIGLVGILGCMIYRSFQ
                     NNDGYHVEVDEIKATEEHNARELATGVKEGNPWNL"
     gene            3262..3873
                     /gene="qoxC"
                     /locus_tag="U0290_001641"
     CDS             3262..3873
                     /gene="qoxC"
                     /locus_tag="U0290_001641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit III"
                     /protein_id="HEM2301685.1"
                     /translation="MESVETNKNLPIEYRSEQGRLNILGFWIFLGAEIALFATLFATY
                     FVMRKAGSNAGHPPAEMFELWLVLIMTFLLLTSSFTCGLAIGEMRKGNVKMLTIYSII
                     TLILGAGFVGFELYEFAHYVTEGVTMQIGSYWSAFFVLLGTHGLHVTVGIFWISFILI
                     QIKMHGLTPKTASKVFISSLYWHFLDVVWIFIFTGVYLLGMVN"
     gene            3875..4207
                     /gene="qoxD"
                     /locus_tag="U0290_001642"
     CDS             3875..4207
                     /gene="qoxD"
                     /locus_tag="U0290_001642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytochrome aa3 quinol oxidase subunit IV"
                     /protein_id="HEM2301686.1"
                     /translation="MTQNNKSNAAHAEGGIPWKHIVGFALSVILTLLAVWVALYSTLT
                     TNVKVVIIFIFAFIQAALQLLMFMHMTEGRDGKIQIGNILFAAFIAIVVVIGSYWVME
                     IGHMNHLL"
     gene            complement(4259..5377)
                     /locus_tag="U0290_001643"
     CDS             complement(4259..5377)
                     /locus_tag="U0290_001643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CapA family protein"
                     /protein_id="HEM2301687.1"
                     /translation="MKSRKKGIILVLSIIIIFSIGLLVNNIMTNNKDTAKQKKKTVAA
                     VKKKKETPPKPKEPFNIDFTGDIMFDWDLRPVLAEKGMDYPFNNVREELKSSDYTFVD
                     LETAITTRTKKVPYQEFWIKSDPSSLTALKNAGVDMVNISNNHILDYYEDGLLDTTAA
                     LRANNLAYVGAGKNEDEAYQLKVADIKGNKVGFMSFCHFFPNTGWIADEDTPGVTNGY
                     DINLVEEKIKEERAKNKDIDYMVVYFHWGVEKTNTPVDYQTQYVKKLVDDHLVDAIVA
                     SHPHWLQSFEVYKDVPIAYSLGNFLFPDYVSGHSAETGIYKLNFNQGKVTAHFDPGII
                     SGNQINMLDGSAKTAQLNYLQSISPNATINSNGDISAK"
     gene            5603..7036
                     /gene="ascB"
                     /locus_tag="U0290_001644"
     CDS             5603..7036
                     /gene="ascB"
                     /locus_tag="U0290_001644"
                     /EC_number="3.2.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM2301688.1"
                     /translation="MTESKFPKDFLWGGAVAANQCEGAYLEDGKGLSLVDILPTVEDG
                     RWEALFNPSKALATDYGFYPSHESIDFYHRYKEDIKLMAEMGFKCFRMSISWPRIFPN
                     GDETTPNEKGLAFYDAVFDECHKYGIEPVVTINHFDTPLEVFKKYGGWKNRKCIDFYL
                     NFCEAIFTRYKDKVKYWMTFNEINMILHLPYIGGGLDVTKEDNPEEVKYQAAHHQLVA
                     SALATKLGHEINPENQIGCMLAAGNTYPMTCNPKDVWKSIEADREGYFFIDVQARGYY
                     PSYTKRFFKEHNINIKMEDGDLDVLRDHTVDYVAFSYYSSRLTSADPEKNKETEGNVF
                     ATLKNPYLKASEWGWQIDPLGLRITMNTIYDRYQKPLFIVENGLGAVDTVAEDGSITD
                     DYRIDYMREHVREMGEAIEDGVELLGYTPWGCIDLVSAGSGEMKKRYGFIYVDRDNKG
                     NGTLNRSKKKSFDWYKKVIETNGKDID"
     gene            complement(7083..7904)
                     /locus_tag="U0290_001645"
     CDS             complement(7083..7904)
                     /locus_tag="U0290_001645"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C39 family peptidase"
                     /protein_id="HEM2301689.1"
                     /translation="MGNSFSKWGKWILVLGLMFSVFSVSTAGQAAAKETVINKQMVTT
                     ASLNVRSTNSTSGKVIGWLKSNTKFKAIAKTSNNWYRFSLKGKNGYVSGKYVKAATAA
                     PAPKPSTPKIVQMNVPLIVQRPQLPTGCEITNIAMMLRYAGKNVDKVKLAKEMKRHKS
                     NPNYGFVGNPFSKSGWTIYPPALVNQVKKYTGSAKNMTGTNLAGIKNQLNKKRPVVAW
                     VSNFHGFSVHAITITGYDKNNFYYNDSWSGQKNARISQSYFNTCWSKQAKRAISY"
     gene            8145..8885
                     /locus_tag="U0290_001646"
     CDS             8145..8885
                     /locus_tag="U0290_001646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2301690.1"
                     /translation="MAEPKYAIIINDIKRLISDGTFKPGEKIYSEDELKKKYNVSNTT
                     VVRALHELVRAGILARYQGKGTYVSKSIINEEVIFNEYTTVPNGRFNRKTKITNEHTK
                     VVAINEIQDARIAKKLQIPPENMIVHFQRIRLIDDVPWTVQNNYMAKSNLINVDLTNF
                     ERFNSLSEVIKELYGINILHEAMKERIEVEFPVKDKNNFKLLEIDSELPLYHIERITY
                     VPEGQPYEYIESYLRHNFYSIEIEKKKQ"
     gene            8901..9302
                     /locus_tag="U0290_001647"
     CDS             8901..9302
                     /locus_tag="U0290_001647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2301691.1"
                     /translation="MNFIIAAHGRYAQEVKNSCQMITGQTTNISAITFTEEMGVTDVL
                     DAYTAVYSPVNETAIIVDIVGGTPCNAAQMFSTKHPEVKVVSGLSLGLLIPLSLGESL
                     EEAMLGAKENIQFVEQKASYTIVSDDGEEED"
     gene            9302..9790
                     /locus_tag="U0290_001648"
     CDS             9302..9790
                     /locus_tag="U0290_001648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2301692.1"
                     /translation="MGSNGIKHVRVDERLIHGQVATMWTNTIKATRIMIVDDAVVKNE
                     MEKVALKTAVPAGVKLSILTVKGAANNINNDKYAGQQVFLIVKSPHALRGLVDAGVEL
                     PQINVGNMSTKAGSRQIKKSVSVTDENLEDFDYLSQKGIKITAQMVPSEDAVEFASLL
                     KK"
     gene            9813..10616
                     /locus_tag="U0290_001649"
     CDS             9813..10616
                     /locus_tag="U0290_001649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463556.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS
                     mannose/fructose/sorbose/N-acetylgalactosamine transporter
                     subunit IIC"
                     /protein_id="HEM2301693.1"
                     /translation="MDLAVWQIILLVILAACTILDALTLVIGLNFPVITGTLAGIIMG
                     DMVLGLAIGATLQLMVLGVGTYGGASIPDFTTGAIVGTVFAVLSGQDAEFAIGLAIPV
                     GLLMVQLDILARFTNTFFLHRIDSNIASGNISAVKRNIWYGALPWALSRAVPVFIMLT
                     FGQSVVDFILNEIPEWLMGGLRVAGGILPVVGIAILLRYLPTNKFVAYLIIGFVAAAY
                     LKVPMLGVALIGVALAIIYFKQNFKNPVAAGANGAALVGEENEDGEYED"
     gene            10591..11418
                     /locus_tag="U0290_001650"
     CDS             10591..11418
                     /locus_tag="U0290_001650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463557.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HEM2301694.1"
                     /translation="MKMANTKTEQDFEKVLKRRDLIAANFRWLFASQICWNYERMMST
                     GYLYSILPTLRKLYKTDDDLKDMMNMHNQFFNTNPMVGGLILGMDMAIEEREKKASKE
                     VVTGLKTGLMGPFAGVGDTIFGVILPTIFGSIAAYMGLQGNVTGVVIWVLVNILVVGA
                     RFTLLPLGYKQGAKLVTEFADRLNALTDAAILLGVTVVGALIPTVIKATVPFVYKSGK
                     VELKMQDMLDQIMPSLVPVLLVALIYALLGHKKMTSTKAILLVMVIAIILFNLKILG"
     gene            11446..12150
                     /locus_tag="U0290_001651"
     CDS             11446..12150
                     /locus_tag="U0290_001651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar isomerase domain-containing protein"
                     /protein_id="HEM2301695.1"
                     /translation="MGLTFFDKARELTEELEKTQAESIHQAAKLVADSIMNDGIIQAF
                     GSGHSYAAAIEVCGRAGGLIPSKVIMDPAGGYYESIEGVGSLLTHRLQAKPNDIFFLI
                     SNSGRNPMGIELAEWIKSQGCKLIVVTALDASQTAASRHSSGKLLYEFADVILDNRSV
                     QGDAALELDGLEGKVCGTSSFSAVLLLQQTIYEAVELMLEKGYTPPVYRSANIDGGYE
                     YNFAIEDKFADRIFHF"
     gene            12205..12846
                     /locus_tag="U0290_001652"
     CDS             12205..12846
                     /locus_tag="U0290_001652"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HEM2301696.1"
                     /translation="MILKEACIENTTNLVNVIEAGANRVELCDNLAEGGTSVSYGIAK
                     HVVKICHEQNVSVMAMVRPRKGNFVYTKEEISVMIDDILMYKKIAVDGVVFGCITDSG
                     LLDKPAIIELLKAAAGLEVTFHMAFDELVDSEKLPAIDWLAEQGVTRILTHGGDGAKL
                     PEETFIQWRKYIDYAAGRIIILPGGGIKSHNMEWITKETGAAEIHGTDLFGER"
     gene            13051..14955
                     /locus_tag="U0290_001653"
     CDS             13051..14955
                     /locus_tag="U0290_001653"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM2301697.1"
                     /translation="MKYEQLAKDILKNVGGKENINSVFHCITRLRFKLKDENIANTKE
                     IEKLDGVISVIKSGGQYQVVIGNHVPDVFKAVLEVGGISAEGDEGSSAPATGNIFNRF
                     IDMISGVFTPVLGVLAATGMIKGFTAMFVAFGWITVTSGTYQLLYAIGDCLFYFFPIF
                     LGYTAMKKFGGNIFIGMAIGGALVYPTLAGITAGDPLYTLFAGTIFESPIHVTFLGIP
                     VILMSYASSVIPIIVATYFGSKVEKGFKKIIPDVIKTFVVPFCTLLIVVPITFIVIGP
                     IATWAGQLLGAGTIWVYNLSPIIAGLILGGFWQVFVIFGLHWGLVPVAINNLTVLGHD
                     PILAMTFGASFAQIGAVLAVFFKSRNKKIKSLSIPAFISGIFGVTEPAIYGVTLPLKK
                     PFIMSCIAGGIGGGIIGFAGSQTYIMGGLGIFGLPNFFKPGSGISGEFWWVVIAIVIS
                     FILGFILTYVVGFKDPADVVVEQSNTVEGETLIERETIPAPVVGEIVTLADVKDEAFS
                     SGALGKGVAIIPTVGRVVAPAAGTVTTIFPTGHAIGITTKDGAEVLIHIGMDTVQLEG
                     KFFTAHVKQGDVIEKGQLLTEFDIEGIKAAGYDVTTPVVVTNSNQYLDVMITDAKEAK
                     LEERLITLVI"
     gene            15037..15912
                     /locus_tag="U0290_001654"
     CDS             15037..15912
                     /locus_tag="U0290_001654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LD-carboxypeptidase"
                     /protein_id="HEM2301698.1"
                     /translation="MLAKGDLIGIICCSDGRKKEDEKDLKRLKQALEKEFGLQVVFAK
                     TIFQIDDSPFSGTPEERAAELMKLYQNMDVKMIFDISGGDAANQVLPYLNFNIIKKAA
                     KPFIGYSDLTVILNAIFAKTKQPGFNYLLRNLAGEASEIQRVQFQKTFFENQIAINGK
                     SLNEFEWSLGEIVGGNIRCFLKLAGTEFMPDVSNKIILLESLGGKEAKIASYVAQLEQ
                     LGVFSKCLGIVVGEHTEAEKNGEYDRIGILYQQIGLKYKLPVFRTKEIGHSSEAKPCL
                     IGTKVNVSRETLTNF"
     gene            complement(16061..16681)
                     /locus_tag="U0290_001655"
     CDS             complement(16061..16681)
                     /locus_tag="U0290_001655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003721645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301699.1"
                     /translation="MTKTKFVIFIALTVITLLLFLVPKGIQYLKSQNPELLNTAESIK
                     LQAGEYTVGKDIKVGIYDMQVTKGSLSYYSTRLSKGDEIIGINLLDANKLYFEGSGEV
                     ELTPAEFNPIKPSANIFTIQHSGSYEVGKQIPAGKYSLTYTIDKSSKKKPFIQILPSY
                     TDDARIEIQFETKPAYNINLKTGEILTVSKTISEELDTMTVLLKKN"
     gene            complement(16674..>17017)
                     /locus_tag="U0290_001656"
     CDS             complement(16674..>17017)
                     /locus_tag="U0290_001656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727559.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2301700.1"
                     /translation="LSKIKNIASDEDIDNAIDRVGLSPHIDKKVKKYSLGMKQRLNIA
                     QAVFEKPAVILLDEPTNAIDDQGIELINQLLLEEKKRGATIIIASHHKEDIEPLCDMS
                     IRMDQGKIIHD"
BASE COUNT         5269 a         2931 c         3521 g         5296 t
ORIGIN      
        1 gctgattaat ttttaaaaaa gtttgtgagt ttttttaaaa gaactaaata gtaaaagcat
       61 tttttcagtt acataggagt tctaacaagc ttctttcagc actccggtaa tggtattttt
      121 gcgcaaaaat acacattaga aaacatcaaa aggaaaagag gggattcggg tgtcaaaggt
      181 acttaaatct ttgctgctta cggcactact tggggttacc ggccttataa gtggttgtgg
      241 tgacttgacg gtacttaatc caaaagggcc agttgcaaaa ggtcagtcgg acttaattat
      301 ttattcgatt atatttatgc tggttattgt tttgacgatt tttgtattgt ttacgattat
      361 gttggttaaa taccgcgaac ggaaagacat ttcaaactat gagccggata tgcacggtag
      421 taaaaaactg gaaatttttt ggacattgat tccagttgca atcgttattg ctctagctat
      481 tccgactgta aaaacaattt atgcagggga agaagcacca aaagtgactt cgcataaaga
      541 tccaattgtt atttacgcaa caagtgcaga ctggaaatgg atttttagtt atccagatga
      601 gtcaattgaa acagtcaact atgtaaatat tccaaccgac cgtcctgtac tattcaaatt
      661 aacttctgca gatacgatga caagcttttg ggttccgcaa ttaggtggac aaaaatatgc
      721 gatgtctggc atgacgatga atttatattt acaagcagat gaagttggta cgtataaagg
      781 gcgtaacgca aatttcaacg gcgaaggttt tgcggatcaa cgctttgatg tagtagctca
      841 atctgaaaaa gatttcaaaa aatgggcgaa agaaacaaaa gcaagctcgc cagttattac
      901 acaagacata tatgatcgtc ttttaattcc tggaagctct aagaaaaaga cttattctgg
      961 tacgcattta gcatttgttg atgtagcagc tgatccagag tatgttttct atgcctacaa
     1021 acgttttggt tatgagatga caaatccgca taatccaaac acaaaatcaa ccatttctga
     1081 tgaaccaatg cttccggttc gtcctgtgac agtaactaat ccgcaatttg agcgtcatga
     1141 tatgaagcca caaattatta aaaacggcga aggttaccac gaggataaac accgcgaaga
     1201 tgaaatgaag aaaatggaag aagacatcca aacaaatgaa ttcaataaaa aagaatcgga
     1261 tgacgcaggg aagtaaaaag gggggacata aggcatgaaa tggaatgagt ttatcgtaac
     1321 tggcgaccca atgattttag gcgcgcagat ttctatcgta cttgtaagta ttggtgttgt
     1381 tgcgttacta acttatacaa aaaaatggaa gtggctcatg aaagagtgga tttcttccgt
     1441 tgatcataaa aaaattggta ttatgtactt gcttgctgct gtcttaatgt ttttccgtgg
     1501 tggtgtggat gcgctaatga tgcgtaccca gctcgcttta ccggatatga aatttttaga
     1561 cgcacagcat tacaatgaag ttttttctac acatggaacg attatgattt tatttatggc
     1621 gatgccgttt atcatcggat tgatgaacat tgccgtacca cttcaaattg gtgcgcgtga
     1681 tgtagcattt ccatttttaa acaacttaag tttttggacg ttctttatgg gagcgatgct
     1741 atttaactta tcattcgtaa ttggtggttc gccagatgct ggttggacaa actatgcgcc
     1801 acttgcgaca gattttagcg ctggatatgg aattaacttc tatcttctag gtgttcaaat
     1861 cgctggtatt ggtacgctga tgacggggat taactttttc gtcacgattt taagaatgcg
     1921 tacaaaaggt atgacgttaa tgaaaatgcc aatgtttact tggtcttcat taattacaag
     1981 tttgatcatt attttcgctt tcccagtttt aacagtggca cttgctttga tgtcatttga
     2041 ccgactgttt gggacagcat tcttcacact cacgaatggc gggctcccaa tgatgtgggc
     2101 caacttgttc tgggtttggg gtcatccgga agtatatatt gttattttgc cagctttcgg
     2161 tattttctca gagattattt ctactttctc gaggaaaaaa ttattcggtt atccggcgat
     2221 ggttgccgcg atggcagtta tttctttact aagtttccta gtttgggtcc atcacttctt
     2281 tacaatggga tcaggggcgc ttgttaactc cttcttctcc attacaacga tgatgattgc
     2341 gataccgacc gggattaaga tattcaactg gctctttacg atgtacaaag ggcgaataac
     2401 ctttacaacg ccaatgcttt ggtcgcttgc ctttatccct aactttgttg ttggtggggt
     2461 aactggggtt atgcttgcga tggctgcagc cgattatcaa tatcacaata cgtacttctt
     2521 agtatcccat ttccactacg tattaattgc tggaactgtg ttctcctgct ttgccgggct
     2581 tacatactgg tatccaaaaa tggtcggtta cagactaaat gaaaaaattg gtaaatggtt
     2641 cttctggatt ttcgttgttg gatttaacgt ttgtttcttc ccgcaatatt tcctaggact
     2701 agatggtatg ccgcgtcgta tttacactta cgtacaaggt gatggctgga caacgcttaa
     2761 ctttatctct actgtgggcg gattcttgat gggtgtagca ttcttagttc tttgctacaa
     2821 catctactac agctacaaaa actctaaacg tgaagttact ggtgacccgt gggatgctcg
     2881 tacgcttgaa tgggctacaa gttccgctgt tcctccaaaa tataactttg ctgttttacc
     2941 tgaatggaat gacttggatg atttctggaa tagaaaacaa aaaggcgatc catatgtaaa
     3001 tgataaaaat tataaaccaa tccatatgcc aagtaatacc atggttgggt ttgtaatgtc
     3061 tgtcttcttc ttcattgcag gtttcggact agtcttctac tggtactgga tgggaattat
     3121 tggcctagtt ggtattttag gatgtatgat ttatcgttca ttccaaaata acgatggtta
     3181 ccacgttgaa gtggacgaaa ttaaagcaac agaagaacat aatgcgcgcg aacttgcgac
     3241 tggtgtgaag gagggtaacc catggaatct gtagaaacaa ataaaaatct gccaattgaa
     3301 tatagatcag aacaaggtcg attaaatatt cttggattct ggattttcct tggcgccgaa
     3361 attgcattgt ttgcaacgct ttttgcgact tactttgtta tgagaaaggc tggctcgaat
     3421 gcgggtcatc cgccagcaga aatgttcgaa ctttggctag tgctaataat gacattttta
     3481 cttttaacaa gtagttttac gtgtggttta gcaattggtg agatgcgtaa aggcaatgtg
     3541 aaaatgttga cgatttactc gattatcaca ttaattcttg gtgcgggatt tgttggcttt
     3601 gagctttatg aatttgcaca ctatgtgaca gaaggcgtta caatgcaaat cggttcttac
     3661 tggtcggcat tcttcgttct actaggaaca catggacttc acgtaacggt cgggattttc
     3721 tggattagtt ttattctgat tcaaattaaa atgcatggtt tgacgccaaa aacagcatca
     3781 aaagtattta tttccagttt atactggcat ttcttggatg ttgtgtggat tttcattttc
     3841 accggtgtct atttgctagg gatggtgaac taatatgaca caaaataata aatcaaatgc
     3901 agctcatgct gaaggtggca ttccttggaa acatattgtt ggctttgcgt tatcagttat
     3961 tttgacgctt ctagcagtct gggtggctct ttattcgacg ctaacaacaa atgttaaggt
     4021 agttattatt ttcatctttg cgttcattca ggcagcccta cagcttctga tgttcatgca
     4081 tatgacagaa ggccgcgatg gtaaaattca aatcggtaat attttattcg ccgcatttat
     4141 cgcgattgtc gtagttattg gttcttattg ggtaatggaa attggccata tgaatcattt
     4201 gttataaaaa ataagctgat gcttagaacg gttaaaaccg aactagcatc agcttttttt
     4261 attttgcgga tatatcacca ttactattaa tagttgcatt tggagaaatg gattggagat
     4321 aatttaattg tgctgtcttg gcagaaccgt caagcatatt aatttgatta cctgaaataa
     4381 taccaggatc aaaatgcgca gtcactttac cttgattaaa attcagttta taaatacctg
     4441 tttctgctga atgaccagaa acatagtcag gaaacaagaa attacctaat gaataagcaa
     4501 ttggaacatc tttgtatacc tcaaaacttt ggagccagtg tggatggcta gcaacaatcg
     4561 cgtcaactaa atgatcatcc acgagttttt taacgtattg ggtttgataa tctacaggtg
     4621 tattcgtctt ttcaactccc cagtgaaaat agacgaccat ataatcaata tctttatttt
     4681 ttgcgcgttc ttctttgatt ttttcttcga ctaaatttat atcataacca ttagtaaccc
     4741 caggagtatc ttcatcggca atccaaccag tatttgggaa aaagtggcaa aacgacatga
     4801 atccaacttt attacctttg atgtcagcaa ctttaagttg ataggcttca tcttcatttt
     4861 taccggcgcc aacataggct aggttattgg cgcgtaaagc agccgttgtg tcgagtaatc
     4921 catcttcgta atagtctaaa atgtggttat tactaatatt aaccatatca acccctgcat
     4981 ttttaagagc tgttaaagaa ctaggatcac ttttaatcca aaattcttgg taggggactt
     5041 tttttgttcg agttgtaata gctgtttcta aatcaacaaa tgtatagtcg cttgatttca
     5101 attcctcgcg aacattatta aaaggataat ccattccctt ctctgctaaa acggggcgta
     5161 aatcccaatc aaacataata tcacctgtaa aatcaatgtt aaatggttct tttggttttg
     5221 gaggtgtttc ttttttcttt ttaacagcag cgacggtttt ctttttttgt ttagcggtat
     5281 ctttgttatt tgtcatgatg ttgttcacta ataaaccgat ggaaaaaatt ataataatag
     5341 acagtaccaa gataatccct ttttttcttg atttcatttt ttctcctcct aaattaaaaa
     5401 gttatctaat tctatcagta tggagaaaag ggtttttatc aaaaataggc ttttttttgg
     5461 attttaatgg ctaaattgtg aactttaaaa tcataaaatg gaaaatgaat ttaaaaaatt
     5521 tgaaattatt gcttgctatg taatgcatta catattctat agtggaaaag taaattatat
     5581 tcgtgagagg agatatacaa aaatgacaga atcaaaattt cctaaagact ttttatgggg
     5641 cggagcagtt gctgccaacc aatgtgaagg agcttatctt gaagacggta aaggactttc
     5701 acttgttgat atccttccaa cagtagagga cggacgttgg gaagctttat tcaatccatc
     5761 gaaagcgctt gctacagatt atggttttta cccaagtcac gaatcaattg atttttatca
     5821 tcgttataaa gaagacatta aattaatggc tgaaatggga ttcaaatgtt tccgtatgtc
     5881 catcagttgg ccacgtattt tcccgaatgg tgatgaaacg acaccaaatg aaaaaggttt
     5941 agcattttat gatgcagttt ttgatgaatg tcacaaatat ggtatcgaac cagttgttac
     6001 aatcaaccat tttgatactc cgctagaagt tttcaaaaaa tatggtggtt ggaaaaatcg
     6061 taaatgcatc gacttttact tgaatttctg tgaagcaatt ttcacgcgtt ataaagataa
     6121 agtaaaatat tggatgacat ttaatgaaat taacatgatt cttcatcttc catacattgg
     6181 tggaggttta gacgttacta aagaggataa tccagaggaa gttaaatatc aagctgctca
     6241 tcatcaatta gttgcatcag cacttgcaac taaacttggt catgaaatca atcctgaaaa
     6301 tcaaatcggt tgtatgcttg cagcgggtaa cacatatcca atgacttgta atccaaaaga
     6361 tgtctggaag tctatcgagg cggaccgtga aggctacttc ttcattgatg ttcaagcacg
     6421 cggatactac ccaagctaca ctaagcgttt cttcaaagaa cacaacatca acatcaaaat
     6481 ggaagatggc gatttagacg tattacgcga tcacacagtt gattacgtgg cattcagcta
     6541 ctattcttct cgtctaacaa gcgcagatcc agagaaaaac aaagaaacag aaggcaacgt
     6601 tttcgcaaca ctaaaaaacc catacctaaa agcaagcgaa tggggttggc aaattgatcc
     6661 actaggtcta cgtattacta tgaatacaat ttacgaccgt tatcaaaaac ctcttttcat
     6721 cgttgaaaat ggcttaggtg cagtggatac tgtggcagaa gacggctcaa tcactgatga
     6781 ttacagaatc gactacatgc gtgaacacgt tcgcgaaatg ggcgaagcaa ttgaggatgg
     6841 cgtggaactt cttggttata caccatgggg ctgcatcgac cttgtcagcg ctggctctgg
     6901 cgaaatgaaa aaacgctacg gcttcatcta cgttgaccgc gataataaag gcaacggaac
     6961 cctaaaccgc tcgaagaaaa aatcattcga ctggtacaaa aaagtaattg aaacaaatgg
     7021 taaagatatc gactaatata tcagaaatcc ccactttcat catcgaaagt ggggatttta
     7081 ttttaatatg aaatcgcgcg ttttgcttgt ttgctccaac aagtattaaa ataactttgc
     7141 gaaattcgtg catttttttg accggaccag ctgtcgttat agtaaaaatt atttttatca
     7201 taacctgtaa tagtaatcgc atgaacggaa aaaccatgga aattactaac ccaagctaca
     7261 actggacgtt ttttattcaa ctgattttta ataccagcta aatttgttcc agtcatattc
     7321 ttcgcgctcc cagtatattt tttaacttga ttaactaaag ccggtggata aatcgtccag
     7381 ccactcttag agaatggatt tccaacaaaa ccataattcg gattggattt atgacgtttc
     7441 atttctttgg caagtttgac tttatcgaca tttttcccag cgtagcgcag catcatcgca
     7501 atgtttgtaa tctcgcagcc agttggcaat tgtggacgct gaacgattaa aggcacattc
     7561 atttgcacaa tttttggcgt tgaaggtttt ggtgccggcg cggcagttgc ggccttgacg
     7621 tatttcccag atacgtagcc attttttcct ttcaaactaa atcgatacca gttattcgat
     7681 gttttagcaa tcgctttgaa ctttgtattg ctcttaagcc aaccaataac tttcccagaa
     7741 gtcgaattag ttgaacgaac atttaggctt gcagttgtta ccatttgctt gttaatcaca
     7801 gtctcttttg ccgccgcctg accagctgta gaaacactaa aaacgctgaa cattaaccca
     7861 aggacaagta tccatttccc ccatttacta aaagaattcc ccattatatc cccctttgat
     7921 acagattact tatgtatacc ctattttgga aaaataaaaa gaaaacgctt gcataaatga
     7981 aatggccgtg gtactataaa aatgaactta acgtgttaac cggttattaa tttaaagttc
     8041 agtgatagca ggctaattca agtttgcaat caaaaaatta tcatggtacc attaacctaa
     8101 aacttaacgt gttaacgcgc gggatgcttt agggggaatt tgttatggcg gaaccaaagt
     8161 acgctattat tatcaatgat atcaagcgat taattagtga cggaactttt aagccagggg
     8221 aaaaaattta ttcggaagat gaactgaaaa agaaatacaa tgttagtaat acgacagttg
     8281 ttcgagcatt acatgaatta gtacgagctg ggattttagc tcgttatcaa ggaaaaggca
     8341 catacgtgag taagtctatt attaacgaag aagttatttt taatgaatat acgacagtgc
     8401 cgaacggaag attcaatcgt aaaacaaaaa ttactaacga acatacaaaa gtagttgcaa
     8461 taaatgaaat tcaggatgcg cgaattgcta aaaaattgca gattccccct gaaaatatga
     8521 ttgttcattt tcaacgaatc cgccttattg atgatgtgcc ttggaccgta caaaataact
     8581 atatggcaaa atccaatttg atcaacgtag atttaaccaa tttcgaaaga tttaattctt
     8641 tatctgaagt aattaaagag ctttatggta ttaatattct gcacgaagcg atgaaggagc
     8701 gaattgaagt cgaatttcca gtaaaagaca aaaataattt taaattactc gaaattgact
     8761 ccgaattacc gctttatcac attgaaagaa taacctatgt gccagagggg caaccctatg
     8821 aatatattga aagctacttg cggcataatt tttactctat tgaaattgaa aagaaaaaac
     8881 aatagaaggg agttaattac ttgaatttta ttatcgcagc acatggccgg tacgcacagg
     8941 aagtgaaaaa tagctgtcag atgattactg gccaaacaac taatatctca gcaattactt
     9001 ttaccgaaga aatgggggtg acggatgtat tagacgccta cacggccgtt tattcacctg
     9061 taaatgaaac cgctatcata gttgatattg ttggtggaac tccgtgtaat gcggctcaaa
     9121 tgtttagtac aaaacatcca gaagttaaag ttgtatcagg tttgtcgcta ggattactca
     9181 ttccacttag ccttggagaa agtttagagg aggcgatgct tggagcaaaa gaaaatattc
     9241 aatttgtaga gcaaaaagcg agttatacga tagtaagtga tgatggggag gaagaggact
     9301 gatgggaagc aacggaatta aacacgtacg cgtagatgag agactaattc acgggcaagt
     9361 agcaacaatg tggaccaata ctataaaagc aacgcgaatc atgattgttg acgatgcggt
     9421 tgtaaaaaat gaaatggaaa aagttgcctt aaaaaccgca gtaccggctg gtgtcaaact
     9481 aagcattctg accgtaaaag gtgcagcaaa taatatcaat aatgataaat acgcagggca
     9541 gcaagttttc ttaatcgtaa aatcacctca tgctcttcgc ggtttagtag atgcgggggt
     9601 agaacttccc caaatcaatg ttggaaatat gtcgactaaa gcagggagcc gacaaatcaa
     9661 aaaatcagtt agcgtgacgg atgaaaattt ggaagatttc gattacttgt ctcaaaaagg
     9721 cattaaaatc actgcccaaa tggttccgag tgaagatgcg gttgaatttg caagtttatt
     9781 aaaaaaataa gtgataagaa gggagaacta caatggattt agcagtttgg cagattatat
     9841 tgttagttat actcgcagct tgtaccattc ttgatgcttt aactttagta ataggactta
     9901 atttccctgt aataacagga acgcttgctg gaatcattat gggtgacatg gtgctcggac
     9961 ttgcgattgg ggcaacttta cagctgatgg ttctaggtgt tggtacatac ggcggagcgt
    10021 cgattcctga ctttacaacg ggagcaatcg tcggcacagt atttgccgtt ttatcaggtc
    10081 aggatgcgga atttgcgatt ggacttgcaa ttccagtggg acttttaatg gttcaattag
    10141 acattttagc aagatttacg aatacatttt tcttgcaccg cattgattct aatattgctt
    10201 cgggcaacat ttcggcggtt aaaaggaaca tttggtatgg ggcgctacca tgggctttat
    10261 cacgcgcggt tcccgtattt atcatgttga ctttcggaca aagcgtggtt gattttattc
    10321 taaatgaaat tccagagtgg ctaatgggcg gccttcgtgt agctggtgga attcttccgg
    10381 tagttggtat tgcgattctc cttcgttact taccaacaaa caaattcgtc gcttatttaa
    10441 ttatcggatt tgtagcagcg gcttatctaa aagtaccgat gctaggcgtg gcactaattg
    10501 gcgtggcttt ggcaatcatt tactttaaac aaaatttcaa aaatccagtg gctgccggag
    10561 caaatggcgc agcgctagtt ggggaggaga atgaagatgg cgaatacgaa gactgagcag
    10621 gattttgaaa aagtactcaa gagacgcgat ttaatagcag caaactttcg ttggttgttt
    10681 gccagccaaa tatgttggaa ctatgagcga atgatgtcga ctggttatct ttatagtatt
    10741 ttgccaacgc ttcggaaact ttataaaaca gacgatgatt taaaagatat gatgaatatg
    10801 cataaccaat ttttcaatac gaatcctatg gttggtggtt tgatcttagg aatggatatg
    10861 gcgattgaag agcgcgaaaa gaaagcgtca aaagaagtcg taactggttt gaaaacgggt
    10921 ttgatgggac catttgctgg tgttggtgat acgattttcg gggttatttt accgacgatt
    10981 tttggatcaa ttgccgcata tatgggactt caaggtaatg tgacaggtgt ggttatctgg
    11041 gtattagtta atattttggt tgtgggagca agattcacct tacttcctct aggatataag
    11101 caaggtgcaa aactagtgac ggaatttgcg gacagactta acgcgttaac cgatgcagcg
    11161 attctgctcg gggtcacggt cgtcggggca ttaataccaa ccgtaatcaa agcaactgtc
    11221 ccattcgttt ataaatcagg aaaagtagag ctcaaaatgc aagacatgct cgatcaaatc
    11281 atgccatcac tcgttccagt tttactcgtg gcgctaatct atgcactttt aggccacaaa
    11341 aaaatgacat ctacgaaggc tattttatta gtaatggtca ttgcgattat tttattcaac
    11401 ctaaaaattc taggttaaaa tataaaaatt ggaggaatag acaaaatggg tttaacattt
    11461 tttgacaaag cgcgtgaatt aacggaggaa ctagaaaaaa cacaggcgga aagtattcat
    11521 caagcagcaa aactggtggc agacagcatt atgaacgacg gaattattca agcatttggt
    11581 agtgggcact catatgcggc agctattgaa gtatgtggga gagcaggagg actaattcca
    11641 tcaaaagtta ttatggaccc agctggcggt tattatgaat cgattgaggg cgttggttcc
    11701 ttgcttactc atagattaca agcgaaaccg aatgatatat tcttccttat atctaattca
    11761 ggacgcaatc caatgggaat tgagcttgcg gaatggatta aatcacaggg ctgtaaatta
    11821 attgttgtaa cagcactcga tgcctcacaa acagcagctt caagacactc ttctggaaaa
    11881 ttgttgtacg agtttgcgga tgttatttta gacaatcgtt cagtccaagg ggatgcggca
    11941 cttgaattag atggattaga aggaaaagtt tgcggaacct cttcattctc agccgttctg
    12001 cttctccaac aaacaatcta tgaagcagta gaacttatgc ttgaaaaagg ctatacacca
    12061 ccagtttatc gtagtgcaaa tattgatggt ggctatgaat acaattttgc gattgaagac
    12121 aaattcgctg atcgtatttt ccacttctaa taaaaacgag cgcgaaaatg aacattattt
    12181 tcgcgctttt ttggaggata gaaaatgatt ttaaaagaag cctgtattga aaatacaact
    12241 aatctggtga acgttattga agctggagct aatcgagtgg agctttgtga taatctagcg
    12301 gagggcggaa cttctgtaag ttacgggatt gcgaaacatg tggtgaaaat ttgtcatgaa
    12361 caaaatgtaa gtgtaatggc aatggtccgt ccccgaaaag gcaattttgt ttatacaaaa
    12421 gaagaaattt cagttatgat tgatgacatt ttgatgtata agaaaatagc ggttgatggc
    12481 gtggtttttg gctgtattac ggattctgga ttgctagata aaccagccat aattgaatta
    12541 ttgaaagccg cagcaggtct ggaagtcact tttcatatgg cgtttgatga gttagtagac
    12601 tcggaaaaat tgccggcaat tgactggtta gctgagcaag gcgttacaag aattctcaca
    12661 cacggtggtg acggcgctaa acttcccgaa gaaactttta ttcaatggcg aaaatatatt
    12721 gattacgcag caggtcgaat cattatttta ccaggtggag gaattaaatc gcacaatatg
    12781 gaatggatta caaaagaaac aggagcagct gaaatacatg gcactgactt gtttggggag
    12841 cgctaaaact ccccaaataa atttatttaa aaaaaaagct tgcaaccgtt ttctttatat
    12901 gatatattta tctcatcaca aaggattgtt accaattcat tgggcaaaac ctaagctgat
    12961 ttgtaggaca cgtgtatgcg tggagtcctc gaatgagctt aggtttttct ttttgcccaa
    13021 aaaaccaaaa agaggaagga agtcgtcaaa atgaaatatg aacaattagc aaaagacatc
    13081 ttgaaaaatg tcggcggtaa agaaaatatc aatagtgttt tccattgtat taccagactt
    13141 cggtttaaac tgaaagatga gaatattgcg aacacaaaag aaattgaaaa gcttgatggc
    13201 gtaatctctg tcattaaaag tggtggtcaa taccaagtag ttatcggtaa ccacgtacca
    13261 gatgtattta aagcagtatt agaagttggc gggatttcag ctgaaggtga cgaaggaagt
    13321 agtgcaccag caacaggtaa tatcttcaac cgcttcatcg atatgatttc tggcgtattt
    13381 acaccagttc taggtgtatt agccgcaaca ggtatgatta aaggtttcac tgccatgttt
    13441 gtagcatttg gttggattac agttacttca ggtacgtacc aactacttta tgcaattggg
    13501 gattgtttat tctacttctt cccaatcttc ctaggttaca cagcaatgaa aaaattcggc
    13561 ggaaacatat ttatcgggat ggctataggt ggtgccttag tttatccaac acttgcaggt
    13621 attacagcag gtgacccact ttatacactt ttcgcaggaa caatttttga atctccaatt
    13681 cacgtaacat tcttaggaat tccagttatc ttgatgtctt atgcatcttc tgttattccg
    13741 attatcgtag caacatattt tggttccaaa gtagaaaaag gcttcaagaa aatcattcca
    13801 gatgtaatta aaactttcgt agttccattc tgtacattat taatcgtagt tccaatcact
    13861 ttcatcgtaa ttggcccaat tgctacatgg gctggtcaat tattaggagc aggaacaatt
    13921 tgggtttata acttaagtcc aattatcgcg ggtctaattt taggtggttt ctggcaagta
    13981 tttgttatct ttggacttca ctggggtctt gtaccagtgg caatcaacaa cttaactgtt
    14041 cttggacatg atccaatttt agcaatgaca tttggtgcat cttttgctca aatcggtgca
    14101 gtattagcag tattctttaa atctagaaac aaaaaaatca aatctcttag tatcccagca
    14161 tttatttccg gtatctttgg tgtaactgaa ccagcgattt acggtgttac tttaccactg
    14221 aaaaaaccat tcatcatgag ctgtatcgct ggtggtattg gtggcggaat cattggtttt
    14281 gcagggtctc aaacatatat catgggtgga cttggaatct tcggtcttcc taacttcttc
    14341 aaaccaggta gcggtatttc aggcgaattc tggtgggtag ttatcgcaat cgttatcagc
    14401 ttcatccttg gtttcatctt aacttatgta gtaggtttca aagatccagc tgatgtagta
    14461 gtagaacaat ctaacacagt agaaggcgaa actttaatcg aacgtgaaac aattccagct
    14521 ccagtagttg gcgaaatcgt aactttagca gacgtaaaag acgaagcatt ttcatccggt
    14581 gcacttggaa aaggtgttgc aatcatccca actgttggac gtgtagtagc tccagcagca
    14641 ggaacagtaa caactatctt cccaactggt catgcaatcg gtattacaac taaagacggt
    14701 gcagaagttt taatccacat cggtatggac accgttcaac ttgaaggtaa attcttcaca
    14761 gcacacgtga aacaaggcga cgtaatcgaa aaaggtcaat tactaactga atttgatatt
    14821 gaaggcatca aagctgctgg atatgacgtt acaactccag tagtagtaac aaactccaat
    14881 caatatttag acgtaatgat tacagatgca aaagaagcga aactagaaga acgtttaatc
    14941 acattagtaa tctaaaattc attaataaac agcttgggcg taaatctgct caagctgttt
    15001 ttatgttata ctgagggaaa aataggcggt gagcggatgt tagcaaaggg cgatttgata
    15061 gggataattt gttgttctga tggtcgaaaa aaagaagacg agaaggattt gaagcgcctt
    15121 aaacaagcct tagaaaagga atttggactt caggtggttt ttgcgaaaac tatttttcaa
    15181 atagatgatt cgccttttag tggtactcct gaggaacgag cagccgaatt aatgaaacta
    15241 tatcaaaata tggatgtaaa aatgattttt gacatttcag gaggggatgc ggctaatcaa
    15301 gtattaccat atcttaattt taacattata aaaaaagcag ccaaaccttt tatcggctat
    15361 agcgacttaa ccgtaatatt aaatgcaatt tttgcgaaga cgaagcagcc tggctttaat
    15421 tatttactgc gaaatttagc aggtgaagct agcgagatac aacgagtcca attccaaaaa
    15481 acatttttcg agaatcaaat tgcgataaat gggaaatccc ttaatgagtt tgaatggagc
    15541 ctgggtgaga tcgttggtgg aaatatccgc tgttttttaa aactagcagg aacagaattt
    15601 atgcctgacg tctcgaataa aataattttg ttagaaagtt taggtggaaa agaggcgaaa
    15661 attgcttctt atgtagcgca attagaacag ttaggtgtgt tttcgaaatg cttaggaata
    15721 gttgttgggg aacacactga ggctgagaag aacggggaat acgacagaat aggaatctta
    15781 tatcaacaga ttggattaaa atataagttg cctgtttttc gaactaagga aatcggtcat
    15841 agcagcgaag caaaaccatg tttaattggc acaaaagtta atgtttcacg tgaaacatta
    15901 acaaattttt aataatttta ttgcgaaata ttcataatta acctttaata tagaacttgt
    15961 aagcaaggaa tacaattagt tttactccct ttttgctaat tgtagaattc cttaaaatcc
    16021 taaactccct ttttggaccg acttgattgt cggtcttttt ttagttcttt ttaagtaaga
    16081 cggtcatagt atcaagttct tctgatattg ttttactaac agtcaagatt tctcctgttt
    16141 ttaaattaat attatatgcc ggtttggttt caaattgtat ttcaatacga gcgtcatcag
    16201 tataagatgg taatatttga ataaaaggtt ttttcttact acttttgtca atggtataag
    16261 tcaggctgta cttcccagct ggaatttgtt taccaacttc gtaagacccg gagtgttgga
    16321 ttgtaaaaat attggcagaa ggtttaatgg gattaaattc tgccggtgta agctcgactt
    16381 caccgcttcc ttcaaaatac agtttattag catctagtaa attaatacca attatttcat
    16441 cgcctttaga aagccttgta ctatagtaag atagcgaacc ctttgttact tgcatatcat
    16501 atattccaac ttttatatct tttccaacag tgtattcacc agcttgaagt ttaatgcttt
    16561 cagctgtatt caatagctca ggattttggc ttttgagata ttgaatacct ttaggaacga
    16621 ggaatagaag cagtgtaatg actgtcagtg ctatgaaaat aacgaatttg gtcttagtca
    16681 tggataattt tcccttggtc cattcggata ctcatatcac aaagtggttc tatgtcttct
    16741 ttatgatgac ttgcaataat aatagtggct ccgcgtttct tttcttctaa aagtaattgg
    16801 ttaattagtt caataccttg atcatctatc gcatttgtgg gttcatcaag caagatgaca
    16861 gcgggttttt caaaaacggc ctgtgcaata ttaagtcttt gcttcattcc aagcgaatat
    16921 tttttaactt ttttatcaat atgtggagat aatcctactc tatcaatggc attatcaata
    16981 tcttcatcgc ttgcaatatt tttaatttta gataata
//
LOCUS       DASDYO010000061        16548 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.061, whole genome shotgun sequence.
ACCESSION   DASDYO010000061 DASDYO010000000
VERSION     DASDYO010000061.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16548)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16548)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16548
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.061"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(151..603)
                     /locus_tag="U0290_001657"
     CDS             complement(151..603)
                     /locus_tag="U0290_001657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HEM2301701.1"
                     /translation="MYEKLVNKYQDEVTIREEKMPYKLPGLYLNGTIFISKDQSSIEK
                     GCVLVEELMHYKYTVGNITKQETIMDKKQEIFARRKGYEELIPLDDIIACFYLGLREY
                     FEVAEFLEVTEEFLRHTVTHYAEKYGPMYDYGGYFINFGNSIDVYKKF"
     gene            complement(609..944)
                     /locus_tag="U0290_001658"
     CDS             complement(609..944)
                     /locus_tag="U0290_001658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2301702.1"
                     /translation="MELNKFVGNKIKQYREERGLNQEALAEKLHTTRQTISRYENGDR
                     KANQDVLFELAKIFNKRLDDFFPERNLPPVDERLVTIAAHIDDDVTEEEMRDILAYIE
                     MKKKLHRGM"
     gene            1161..1589
                     /locus_tag="U0290_001659"
     CDS             1161..1589
                     /locus_tag="U0290_001659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301703.1"
                     /translation="MDRKLLKEKQIQLIFQLEQEENRFIRKRLIEELEFFEALGDREK
                     GLLTAEQKLLILTPSEYREYKRTKSDVQISRLIGVSRSSLAEWKRKKGLNRKKPQPVQ
                     QEMIDVLAFHLDKTKDEIGALPASAIECQYEAFVINEAHN"
     gene            1601..2017
                     /locus_tag="U0290_001660"
     CDS             1601..2017
                     /locus_tag="U0290_001660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301704.1"
                     /translation="MQVLVLPENKDINYIKTVQEVKRFFADFERFRMITGLSKKPQLL
                     RNGFLEEPQFAPVAFSARHNKEVILEARWLVEKYTEMLNQMDDLYRTILMECYVERKQ
                     DVAVMMDLPYEIAQFKRIKKRAVLEIATLMGILVRK"
     gene            2297..2686
                     /locus_tag="U0290_001661"
     CDS             2297..2686
                     /locus_tag="U0290_001661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5072 family protein"
                     /protein_id="HEM2301705.1"
                     /translation="MKSLSFMRVLEAVRTMLQEKGGLDVSIVMRDQVEMPTTMIEMID
                     QEEEESQTAWKEKYRFAIHHYTNETDLAGVEMIDTLIQTGFTLPEGYKLIAVRHYGKQ
                     NLVKENTLIHAKTSFEVSICRELKVKI"
     gene            2699..3211
                     /locus_tag="U0290_001662"
     CDS             2699..3211
                     /locus_tag="U0290_001662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major tail protein, TP901-1 family"
                     /protein_id="HEM2301706.1"
                     /translation="MAFEENLYCDYTPGAAKAVAGKDVILAVFNAAGDKLLAVAGQQG
                     LTVNRSKDSIEITSKDTVGGWKSKIGGMKEWSIENDGLYVADAESHKELAKYFESDSP
                     VCVKIINQASKKGLFGGLAIVADYSFEAPFDEAMTYSVKLDGMGALVDLTITEGGDQM
                     PGETPVAPAE"
     gene            3259..3561
                     /locus_tag="U0290_001663"
     CDS             3259..3561
                     /locus_tag="U0290_001663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="segregation and condensation protein B"
                     /protein_id="HEM2301707.1"
                     /translation="MFEVNDTTYILRFNKQKVKTVELTSGISLVAALTANKGILSYQV
                     IETLFVSGLVEEKGLVPVKQKEALEIFDKLVEEQGLISLNVAVIEKLQEDMGFLFR"
     gene            3603..4007
                     /locus_tag="U0290_001664"
     CDS             3603..4007
                     /locus_tag="U0290_001664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phenylalanine racemase"
                     /protein_id="HEM2301708.1"
                     /translation="MDSEMNHDFDLEKQFAFFVVNFQMSKHDFEELTEVEKNFIMKEW
                     ENKVIFESTMLRNAVLNAEQNLNRKRNSRFIDLHKKRQKKADVNYTVNALQAISDNEA
                     KEGKAWIDRIYGANGLRRPKNKEERGKVNGGF"
     gene            3994..5862
                     /locus_tag="U0290_001665"
     CDS             3994..5862
                     /locus_tag="U0290_001665"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003732223.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301709.1"
                     /translation="MADSKSFTFELNESVLTAQVGRLDEMAMVVERRFSELKMTIEDV
                     GNADPGSKISESLGGLQSGLGTISSAFGQLGSSSEAITSGFGTAVGSVGGITDAFKNL
                     GSSVQNGTLFSSLATGIGGMSTMLGGVSGGVQGITNLASGFMELKKHLGGLMSSIGGV
                     GGIMGKLTSPMGLVIIGIVALVAAFAYLMTTNESFRNTVMSVVTQVAQLFGQLVASLM
                     PIIMQIVTAVMQIGAALMPMVMQFISFFAQLLAQLMPFINMLISMLMPVIMQIVQVVM
                     SLVSALLPSIMTVIQGIMSVIQFLIPIIMQIATVVVQIVVTIISYISKIMPIVMTIIG
                     VIVSIITTIISYVVIIATTIASVIGKIISFIASVITAVIGIVQPIIGFITNIFTTIVT
                     IIGAAFQMVFTVASKIWNAIMTTISGIIEGIKAVITGISTTVSSVFNGVKRIITGVFD
                     GIKSAWGGLTDFVGNIFDGVSSAIQTVVDNVKGFVNVVIRGINGAIGLINKIPGVEIG
                     KIPQLISGTTNFQGGFARMNEGGRGEMVVLPSGSQVIPHDATMKYARESARGNKSILY
                     TSQGADLARVENLLERLLQKNPVIKMDDKVVAEVVSRNQANSFDQYNYTMGGAAYS"
     gene            5859..6677
                     /locus_tag="U0290_001666"
     CDS             5859..6677
                     /locus_tag="U0290_001666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail family protein"
                     /protein_id="HEM2301710.1"
                     /translation="MSDLFLELNGKVHSLSETFPGLSVQEVSRQSPQLSMETAEIAGT
                     DGVIPGMTQFKPFIFSAKCNLQALDIPDYHLAVREIYEFLFQRDSYYIWSDQMPGIRY
                     EVHPKPVDFSRESDRVGLLTIEFDVFKGYAESRGTSLDPMTFEVDLWQMGMNLSNRDD
                     LFYIFKENTFRVYNAGSDRVNPLMRHELDIAMTANGTPTIHNLTTGESFEYRKALQKT
                     DVLLLNNIYPLVNNRRVGKDTNHGIITLEKGWNDFEIKGVTDVTIAFNFPFIYR"
     gene            6687..7823
                     /locus_tag="U0290_001667"
     CDS             6687..7823
                     /locus_tag="U0290_001667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2301711.1"
                     /translation="MDYVIIQSMDKEVEEILTDIDYGSFSYDYEKNTSRAISFTVNKT
                     KQNAAIFDLVGNEAILTYQGQQFVIKKCTPKSIGGTISKQITAQHICYTVQDHVQYNV
                     KSGRKKYSIQTVLEFALQDNVLGFSYEIQGSFPLVELEDLGNKNGLELVNLCLEEFGA
                     ILFADNKKLYFYDEKSWYVRTEKQFRYLYNTEEVSVDTNTDNLKTEIKCYGKQKENAD
                     KLTGDNKYMAVVTYTSPNEAIYGKRMANAKSDDKITNNDDLLIFAKKQILDVPETALT
                     ISYKGKEPVLERDVWYFIHEPMGFETEVKVTKIKSSHPWSKKFQEIGFSNSRRDMVRI
                     QTQIANQVKKTSVDTNKINSFSSIAMNAYDSRILTEVVGVVDGD"
     gene            7813..8112
                     /locus_tag="U0290_001668"
     CDS             7813..8112
                     /locus_tag="U0290_001668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CCA-adding enzyme"
                     /protein_id="HEM2301712.1"
                     /translation="MATEIRVLKNVDDTVFYPKTHVTAVEGLDSATTTTSGLMPASDK
                     TKLNGIEANAEKNNVTAIDIANWNKKQDAILVSENGSNFKITVTNAGELKATKVE"
     gene            8127..8702
                     /locus_tag="U0290_001669"
     CDS             8127..8702
                     /locus_tag="U0290_001669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-amylase"
                     /protein_id="HEM2301713.1"
                     /translation="MKLDLWKWEMLLQGREFRNKTNDNWQKLMDWSDFISTGLSAIYV
                     YVNKADATLNNKIDTVDKAVNARVNELISGTEQLSEVVDARVDAFGARFPVLRERLNQ
                     EQVIYNKKSTVQFDVNTIINMEKQDIGLLTSKTISEAQTVCFLNISSLNEDADIVLEK
                     TGETSFSENLTSLVFAKIGTNERYQMEPVGA"
     gene            8717..9196
                     /locus_tag="U0290_001670"
     CDS             8717..9196
                     /locus_tag="U0290_001670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301714.1"
                     /translation="MTEIKRMLQTKEDNSKEQFYPETHVAGIVGLTEYVSGQLPTGVV
                     SVNGKAGRVLLDAEDVHAAKKSHNHEVATYTTDGFMSSFDKQKIDQLVSPEAGVTSIN
                     GKTGIVDLFAADLDAAEINHTHAEATTTESGFLAKEDKEKLDAMQIIALETIKEVIE"
     gene            9193..9729
                     /locus_tag="U0290_001671"
     CDS             9193..9729
                     /locus_tag="U0290_001671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301715.1"
                     /translation="MTKIVKMSEKNEHGTLEQFYPETHAEAVKGLVSVSEEEKATWNE
                     KETTAGAEQKANTALNSAKDYVDTIGKGTVIFKGANIMAAGQKYTWNSSKLKFGITLL
                     FSRYDSANNTPLDYYYHSVFLSKAQLAELAGKGLLVPMPSATYGERKYLYVSETEVAG
                     HNDNTNNASWALRQLTVM"
     gene            9748..10170
                     /locus_tag="U0290_001672"
     CDS             9748..10170
                     /locus_tag="U0290_001672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin family protein"
                     /protein_id="HEM2301716.1"
                     /translation="MEVILKIGILGFGAIFGYLFGEVDLLVKVLVCFIVADYISGLLA
                     SGYLGELSSKMGFKGIAKKIAILILVAIAHQIDLILGTHNTTRDAVIFFYLANELISI
                     LENFVRMGMKVPEVLKNLILIFDSKSGDEEEKHDKDMD"
     gene            10151..10879
                     /locus_tag="U0290_001673"
     CDS             10151..10879
                     /locus_tag="U0290_001673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEM2301717.1"
                     /translation="MTKIWIDAGHGGKDSGASGNGLVEKNWVLTVAKQLQTELVKAGF
                     EVGMTRTNDTFYELSDRAKKANSFKADLFISLHFNAGGGKGYEDYIYTSVPAATVEIQ
                     KIIHKNIIAKVTKHGMNDRGMKKANFAVLRETAMDAILLEAGFCDSTDALILEKKAYQ
                     TDYCLGIVAAVQEIFGAMVTKYRAGKYLTSDDAISGTNIKGYLEAGTKVFVYKETEKT
                     LNLTTTKGVPGSWVLKTEVNTGKR"
     gene            complement(10917..13271)
                     /locus_tag="U0290_001674"
     CDS             complement(10917..13271)
                     /locus_tag="U0290_001674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-nucleotidase C-terminal domain-containing
                     protein"
                     /protein_id="HEM2301718.1"
                     /translation="MKVNKFFKKTTHVLLVAGLTIGLTAPFTGTTAQAAADTVPIQIL
                     GINDFHGALETASKDASGSPIGGADYLATNLDNATNSFLQANPGATTDNAIRVQAGDM
                     VGASPAVSGLLQDEPTMKVLQKMNFEVGTLGNHEFDEGLPEYKRILDGVSTNKFGPIV
                     EAYPRVKSDMKIVAANVVNKGTNTVAEGFLPYYVKEIDGVKVGFIGIVTTEIPNLVLA
                     NHIKDYDFLDEAETIVKYSAELRGQGVNAIVVLSHVPALSTGNPNTGTKQDVAGEAAN
                     MITKANELDPNNSVDLVLAGHNHQYTNGLVGKTRIVQSYNNGKAFSDVTGELDKTTGD
                     FVTPPDAKITYNTRSVTPNADITAVTEDAKSRIEGVINETIGLANKDVISRDTNPDNK
                     AIDDKESELGNMITDAQRYMANKAGADVDFAMTNNGGIRSDLTTRLANGQNEITWGAA
                     QAVQPFGNILQVVEMTGADILEALNQQYLSNQTYFLQISGLKYTFTDTDDLDHAYKVA
                     SVTTEDGTPLKADQKYKVVINDFLFGGGDGFSAFKKANLVTAIDPDTETFINYIKDQK
                     AAGKVITAQKEGRKVYKSQAEIDKETEDAAIKAIKDATKINKLAEKDKTLTGTTLPGA
                     TVSVQKATANARMALAAGPNATADANGKFSVDVTSLNLKKGDQITTTITDPNGYSTTF
                     QATVQAAATTPPDNGNGGTDNGNGNGNNGGTDGNGGTNNGNGSGTNGGTTTTEDPTTT
                     TPNTSTTGTSANTSLPTTGDTAGFATVFGIVLTTTALYVLRKRS"
     gene            13459..14208
                     /locus_tag="U0290_001675"
     CDS             13459..14208
                     /locus_tag="U0290_001675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="EAL domain-containing protein"
                     /protein_id="HEM2301719.1"
                     /translation="MDISSTEIWDAIRRNSYLLYYQPKVDAKTNKIIGFEGLIRLKTA
                     TTILAPIDFFDDIVLLNATREMQDFVAETAIKQINQLGGRFSISINIPAHYVASSTYM
                     TFLHDYVKEHLKYPECLEIEIIERGEITELAIADKNLRKIKDLGVKVSMDDFGKGYSS
                     LAYLRSLPIDIVKTDMSFIALLKTDRKQQIIIRAIVNLCHDLGGKVVTEGVEDMEQVE
                     KLREMKVDYFQGYYFSRPLPMEDIKEKYSFV"
     gene            complement(14278..15786)
                     /locus_tag="U0290_001676"
     CDS             complement(14278..15786)
                     /locus_tag="U0290_001676"
                     /EC_number="1.1.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="IMP dehydrogenase"
                     /protein_id="HEM2301720.1"
                     /translation="MAFYFEEPSRTFSEFLLVPGYSSAECVPTNVSLKTPIVKFKKGE
                     ESAITMNIPLVSAIMQAVSDDNMGIALATEGGVSFIFGSQSIESEAAMVSRVKNHKAG
                     FVISDSNISPDKTLQDILNLKEKTGHSTVAVTEDGTAHGKLLGIVTSRDYRVTRMSPD
                     EKVADFMTPFEKLVTANKSTTLKEANNIIWDNKLNALPLVDDNEHLVHMVFRKDYDSN
                     KENKLELLDSSKRYVVGAGINTRDYEERVPALVEAGADILCIDSSEGYSEWQKRTLDY
                     VRGKYGDTVKVGAGNVVDRDGFRYLAEAGADFVKVGVGGGSICITREQKGIGRGQATA
                     LIDVAKARDEYFEETGVYIPICSDGGIVYDYHMTLALAMGADFIMLGRYFSRFDESPT
                     NKVNLNGTYMKEYWGEGANRARNWQRYDLGGDKKLSFEEGVDSYVPYAGSLKDNVAIS
                     LSKVRSTMCNCGALNIPELQQKAKITLVSSTSIVEGGAHDVVVKDASNNLIK"
     gene            15953..16186
                     /locus_tag="U0290_001677"
     CDS             15953..16186
                     /locus_tag="U0290_001677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463666.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="(4Fe-4S)-binding protein"
                     /protein_id="HEM2301721.1"
                     /translation="MDEETLLERGYRKYRGAEVDIYFNTNICEHSGNCVKGNAELFNL
                     DRKPWIMPDNVSKEEAKRVIHTCPSGALQYIEK"
     gene            16198..16476
                     /locus_tag="U0290_001678"
     CDS             16198..16476
                     /locus_tag="U0290_001678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyltransferase"
                     /protein_id="HEM2301722.1"
                     /translation="MEYKNGENRIYAVNDEGVEVGEVTFVPTGEDMFIIDHTGVDDAA
                     RGQGIAQELVKRAVEKAKTEGKKIVPLCPFAKAEFAKKPEYQEVQAAK"
BASE COUNT         5189 a         2653 c         3693 g         5013 t
ORIGIN      
        1 agataccgaa taaaaatcgt gttcacaatt tagacatgaa aaagtcactc tttagcaaca
       61 aatttagtgg ttttatcaat aaaaacttac tttttcttcc ctggagagaa attcaaccaa
      121 aaaaagaccc tccatagata ggagagtctt tcaaaacttc ttgtaaacat caatggaatt
      181 gccaaaatta atgaaatatc caccataatc atacatcgga ccatattttt ctgcgtaatg
      241 agtaactgta tggcgcaaaa attcttctgt tacctctaaa aactccgcta cttcaaaata
      301 ttctcgtaag cctagataaa aacaagcaat gatgtcatca agcggtatta gttcctcata
      361 acctttacga cgagcaaaaa tttcttgttt tttatccata attgtttcct gtttagtgat
      421 gttacctaca gtgtatttgt aatgcatcaa ttcttctact aaaacacagc ctttttcaat
      481 ggaagattga tccttactaa taaaaatcgt cccatttaaa taaagacctg gcaatttgta
      541 aggcattttt tcttctctga ttgttacctc atcttggtat ttatttacca atttttcgta
      601 caataaaatc acatcccgcg atggagtttt ttcttcatct ctatataagc taaaatatcc
      661 cgcatttctt cctcggttac gtcatcatca atatgggctg caattgttac caagcgttca
      721 tcaacaggtg gtaaatttct ttcaggaaaa aagtcatcta atcgtttgtt gaaaattttt
      781 gcaagttcaa ataaaacgtc ttgatttgct tttcgatcac cattttcata acggctaata
      841 gtttggcgag ttgtatgaag cttttctgct aatgcttctt gatttaagcc tcgttcctcg
      901 cgatattgtt ttattttatt tcctacaaat ttatttaact ccataataat tgccctccac
      961 atgtttatgg cttcagtata gcacttttag caccaaaacg gaactttttc gaacatattt
     1021 gtcggataaa gtttaccagt aaccaaaatg gtgctataat atttatagag ctagaaaata
     1081 aatgcggctg attttgcgcc aatagcaccg aattggtgac aatgttacta tattaattta
     1141 tgagatggaa gtgggaatgg atggatagaa aacttttaaa agaaaagcaa atccaactaa
     1201 tttttcaact agaacaagaa gaaaatcgat ttattcgaaa gcgtttaata gaagagttgg
     1261 agttttttga agcgcttggg gacagagaaa aaggactgtt aacggcggag caaaagttgc
     1321 ttattttaac accaagtgag taccgagaat ataaacgaac taaatcagat gtgcaaatta
     1381 gtaggttaat tggagtatcg agatcgtctc ttgcggaatg gaagcgaaaa aaaggtttaa
     1441 atagaaaaaa gccgcaaccg gttcagcagg aaatgattga tgtattagct tttcatttag
     1501 ataaaacaaa agacgaaatt ggcgctttac ctgcttcggc gattgaatgt cagtatgagg
     1561 cttttgtgat taatgaagcg cacaattaag gagtgataac atgcaggttt tagttttacc
     1621 agaaaataag gatatcaatt atataaaaac ggtccaagaa gtaaaacgat tttttgctga
     1681 ttttgagcgg tttcggatga ttacggggtt atcaaaaaag ccacagttac ttagaaatgg
     1741 ttttctggaa gagccgcagt ttgcgccggt agcattttct gctagacata ataaagaggt
     1801 cattttggaa gcgcgatggt tggtagagaa atatactgaa atgttaaatc agatggatga
     1861 tttatatcgc actattttga tggaatgtta cgtggaacga aaacaagatg tggcggtaat
     1921 gatggattta ccgtacgaaa ttgcccagtt taaacggata aaaaaacgag cagtattaga
     1981 aatcgcaacg ctaatgggaa ttttagtaag gaaatgatga tactttcgtg atattttgaa
     2041 acgtcatttt acgattaata tagaagtaag ctaattgtct agtaagcgga tgacgataaa
     2101 agctgcatca gaatgaaggt gcaccgattt tctgataata caagaggttg tacaagaaat
     2161 ttgtttttat gattatattt ttcatccgtt gacataaaca aatattctat tttggaaagt
     2221 aaagttcgga ggaataaatt atcaaatgtg gtctcgaccg aattttactt tctgttttta
     2281 aaggagtgaa cgcttggtga agagtttaag cttcatgaga gttttggaag cagtgagaac
     2341 aatgctccag gaaaaaggcg gactagatgt ttctattgta atgcgtgacc aagtggaaat
     2401 gcctacaacg atgatcgaga tgattgatca agaggaagaa gaaagccaaa ctgcctggaa
     2461 agaaaaatac cgttttgcaa tccatcatta tacaaatgaa acggacttag cgggagtcga
     2521 aatgatagat acgcttatcc aaacagggtt cactttgcct gaaggataca aattaatcgc
     2581 tgttcgacat tacggaaaac aaaatttagt caaagaaaat acgttaattc acgcaaaaac
     2641 cagttttgaa gtaagtattt gtcgtgaatt aaaagtaaaa atttaggggg aaatattaat
     2701 ggcatttgaa gagaatttat attgtgatta tacaccggga gctgctaaag cggtcgcggg
     2761 gaaagatgta attttagcag tttttaacgc agcgggggat aagctattag cggttgcggg
     2821 gcaacaaggt ctaactgtaa accgttctaa agatagcatt gaaattacat ctaaagatac
     2881 agttggcgga tggaaatcca aaattggcgg tatgaaagaa tggtcaattg aaaatgacgg
     2941 attatatgtc gctgatgcag agtctcacaa agaattggcg aaatatttcg aaagtgatag
     3001 cccggtttgc gtgaaaatca ttaatcaagc atctaaaaaa ggtcttttcg gtggtttggc
     3061 aattgtagct gactatagtt ttgaagcacc ttttgatgaa gcgatgactt actctgtaaa
     3121 actagacgga atgggtgcgc ttgttgattt aacgattact gagggcggag atcaaatgcc
     3181 cggcgaaaca cctgtagcac cagcagaata aaatagagag ccactgaaat aagtggcttt
     3241 cccttaggag gaaaataaat gtttgaagtg aatgatacaa cttatatttt acgatttaat
     3301 aaacaaaaag ttaaaacggt ggaattaaca tcagggatta gtttagttgc agctttgact
     3361 gcgaataaag ggattttgag ctaccaagtg attgaaacgc tatttgtttc aggacttgtg
     3421 gaagaaaaag gcttagtacc tgtaaaacaa aaagaagctt tggagatttt cgacaaatta
     3481 gtagaagaac aaggcttaat ttcgcttaat gtagctgtta ttgagaaatt gcaagaggat
     3541 atgggttttt tgttccgtta aaacagattg aatttgagta ttttggtgct gaggacgaag
     3601 aagtggatag tgaaatgaac catgattttg atttggaaaa acaattcgct ttttttgtag
     3661 ttaattttca gatgtccaag catgattttg aagaacttac tgaagtggag aaaaatttca
     3721 tcatgaaaga atgggaaaac aaggtgattt ttgaatctac tatgcttcga aatgcagttt
     3781 taaatgcgga acaaaatctc aatcgaaaac gaaattcacg ttttatcgac ttgcataaaa
     3841 aacgtcagaa gaaagccgat gttaattata cagtaaatgc acttcaagca atttccgata
     3901 atgaagcgaa ggaaggtaaa gcgtggattg atcggattta tggtgcaaat gggttacgaa
     3961 gacctaagaa taaagaagaa agggggaaag tgaatggcgg attctaaaag ttttacattt
     4021 gaactgaacg agagcgtttt aacagcgcaa gttggcaggc tagatgagat ggcgatggtt
     4081 gtagagcggc ggttttcaga gctcaaaatg actattgaag atgttggaaa tgctgatcca
     4141 ggttcgaaaa tttccgaatc tttaggtggg ctgcagtctg ggcttggcac gattagttcg
     4201 gcgtttggac aactgggttc tagtagtgag gcgattacat ccggattcgg tactgcggtt
     4261 ggttctgttg gtggaatcac ggatgcgttt aaaaatctag gttcaagtgt gcaaaatggt
     4321 acgttatttt caagcttggc aaccgggatt ggtggcatga gtacaatgct tggtggagta
     4381 tctggcggcg ttcaaggaat tacaaatcta gctagtggat ttatggaatt gaagaagcat
     4441 ctaggcggtt tgatgtcatc tattggtggc gttggtggaa ttatgggtaa actgacctct
     4501 ccaatggggt tagtaattat cgggattgta gcgttagtag ctgcatttgc gtatttgatg
     4561 acgacgaatg aatcattccg aaatacggtg atgtcagttg taacacaggt tgcgcaactg
     4621 ttcggtcaac ttgtcgccag tttaatgccg attatcatgc aaattgttac tgcggttatg
     4681 caaattggtg ccgcgttaat gccgatggtt atgcaattta ttagcttttt tgcgcaattg
     4741 ttagcccaat taatgccgtt tattaatatg ctgatttcca tgcttatgcc tgttattatg
     4801 cagattgttc aagttgttat gtcacttgtt tcggcactat taccgagcat catgacagtg
     4861 attcaaggca ttatgagcgt tattcaattt ttaattccga taatcatgca aattgcgacg
     4921 gtggttgtac aaattgttgt aacgattatt tcttatataa gtaaaattat gccgattgtt
     4981 atgacgatta ttggcgttat tgtttcgatt atcacaacga ttattagtta cgtcgttatt
     5041 attgcgacga cgattgctag tgttattggg aaaattatta gctttattgc gagtgttatt
     5101 acggcggtta tcgggattgt gcaaccaatt attggcttta ttactaatat ctttacgact
     5161 atcgtgacga ttattggtgc agctttccaa atggtattta ctgttgcatc caaaatctgg
     5221 aatgccatta tgacgacgat ttccggaatt attgaaggaa tcaaagcagt catcacaggt
     5281 atttctacta cggtttcatc agtgtttaac ggagtgaagc gcattattac aggtgttttt
     5341 gacggaatca aaagtgcttg gggtggttta actgattttg taggaaatat tttcgatggt
     5401 gtttcaagtg caattcaaac cgtggtagat aatgtcaaag gttttgtaaa cgtcgtaatt
     5461 cgagggatta atggagccat tggtttaatt aataagattc caggcgttga aatcggcaaa
     5521 ataccacaat taatttccgg tacaacaaat ttccaaggtg gctttgctcg aatgaatgaa
     5581 ggcggccgag gcgaaatggt ggttttaccg tcgggttcgc aagtaattcc gcacgatgca
     5641 acgatgaaat acgcaaggga aagtgcgcgc ggaaataaat caatccttta cacgagtcaa
     5701 ggcgctgatt tggctagagt tgaaaatctt ctcgagcgct tactacaaaa aaatcctgta
     5761 atcaaaatgg atgacaaagt ggtagccgag gtagttagcc gtaaccaagc taactcattt
     5821 gatcagtaca attacacaat gggaggtgca gcttattcat gagcgacttg tttttagaat
     5881 taaatggaaa agtgcattcg cttagtgaga catttccagg tctttctgta caagaagttt
     5941 ccagacaaag tccccagtta agcatggaaa ctgctgaaat cgctgggact gatggggtta
     6001 tcccgggaat gacccaattt aaaccgttta tcttttcagc aaaatgtaat ttgcaagcac
     6061 ttgatattcc agattatcat ttggcagtca gagaaattta tgaattttta ttccagcgcg
     6121 atagttatta tatttggagc gatcaaatgc caggaattcg gtatgaggtg catcctaaac
     6181 cagttgattt tagtcgagaa tcggatcgtg ttggtttact cactatagaa tttgatgtat
     6241 ttaaaggcta tgcggagtca cgtggcacga gccttgaccc tatgactttt gaagtggatt
     6301 tatggcaaat gggaatgaat ttatcgaacc gtgatgattt attttatatt tttaaagaaa
     6361 atacatttcg ggtctataat gcggggagcg accgtgttaa tccactgatg cgacatgaat
     6421 tagatattgc gatgacggcg aatgggacac caacgattca taatcttaca acgggagaat
     6481 ccttcgagta tcggaaagcg ctccaaaaaa cagatgtttt actgttgaac aatatttatc
     6541 cacttgttaa taaccgccgt gttggaaaag ataccaatca tgggattatc acccttgaaa
     6601 aaggctggaa cgattttgaa atcaaaggtg taacggatgt aacgattgct tttaattttc
     6661 cgttcattta tcggtaggtg atagatatgg attatgtgat tattcaaagt atggacaaag
     6721 aagtggaaga gattctaaca gacattgatt acggctcctt ttcctacgat tatgaaaaaa
     6781 atacaagtcg tgctatctcg tttactgtga acaaaacgaa acagaatgca gcaatttttg
     6841 acttggtagg aaatgaagca attttaacat atcaagggca gcaatttgtt attaaaaaat
     6901 gtacgccaaa atctattgga ggaacaattt caaagcagat tacggcccag catatttgtt
     6961 atacagtgca agatcatgtg cagtataacg tgaaatctgg acgaaaaaaa tattcgattc
     7021 aaacggtatt ggaatttgcg ttacaagata atgtactagg attttcttat gaaattcaag
     7081 ggagttttcc tttagttgaa ctagaggact taggaaataa aaatggctta gagctagtga
     7141 atttatgttt ggaagaattc ggagcaattt tatttgcaga taataaaaag ctttattttt
     7201 acgatgaaaa aagttggtat gtaaggacag agaagcaatt tcgttattta tataatacag
     7261 aagaagtttc ggtggatacg aacacagata atttgaagac ggagataaaa tgttacggca
     7321 agcaaaaaga gaatgccgat aagctgactg gagataataa gtacatggcg gttgtcacat
     7381 atacttcgcc aaatgaggct atttacggga aacgaatggc aaatgctaaa agtgatgaca
     7441 aaatcacgaa caatgatgac ttattaattt ttgcaaagaa acaaattcta gatgttccgg
     7501 agacagcgct tactatttct tacaaaggaa aagaacctgt tttagagcgg gatgtttggt
     7561 atttcattca tgaaccgatg gggtttgaaa cagaagtaaa agtaacgaaa attaaatcga
     7621 gtcatccttg gagtaagaag tttcaagaaa ttggcttcag taattcgcga cgagatatgg
     7681 tccgaattca aacgcaaatt gctaatcaag tgaaaaaaac gagcgtagat acaaataaaa
     7741 ttaattcgtt ttcgagcatc gcaatgaatg cttatgattc acgaatttta acggaagtag
     7801 taggtgtggt agatggcgac tgaaattaga gtgttaaaaa atgtagatga tacagttttc
     7861 tatccgaaga cacatgtaac ggctgtggaa ggtttggact cggctacaac tactacatct
     7921 ggattaatgc ccgccagcga caaaacgaaa ttaaatggaa tcgaagctaa tgcagaaaaa
     7981 aataatgtga ctgcaatcga tattgccaat tggaataaaa aacaggacgc aattttggtt
     8041 tctgaaaatg gctctaattt caaaataact gtcacaaatg ctggtgaact aaaggcaaca
     8101 aaagtggaat aggaaggagg ttgcgtatga agttggattt atggaaatgg gaaatgcttc
     8161 ttcaaggtcg agaatttaga aataaaacaa atgacaactg gcaaaaatta atggattggt
     8221 ccgattttat ttcaacaggt ttaagcgcga tttatgtcta tgtaaataaa gcagatgcta
     8281 ctttaaataa caaaattgat actgtggata aggcggtaaa tgcaagggta aatgaattga
     8341 ttagcgggac agagcagtta agtgaagtgg tcgacgccag agtggatgca tttggcgcac
     8401 gcttcccagt actaagagaa cgtttaaacc aagaacaggt aatttacaat aaaaaaagca
     8461 cggtgcaatt tgacgtgaat actattataa atatggaaaa acaagatatt gggctgctaa
     8521 caagtaaaac aatctcggaa gcgcaaaccg tatgtttttt aaatatatca agccttaatg
     8581 aagacgcgga tattgttctt gaaaaaacag gcgagacaag cttctcagaa aatttaacaa
     8641 gtctagtctt tgcaaaaatt ggaacgaatg aacgctacca aatggagcca gttggtgcat
     8701 aaaggaggag tgagcaatga ctgaaataaa gcgaatgctg cagacaaaag aagataattc
     8761 aaaagaacaa ttttatccag agacgcatgt tgcggggatt gttgggttga cggaatatgt
     8821 gtcaggccag cttccgacag gcgtggttag tgttaatggt aaggctgggc gcgtgttgct
     8881 agatgcagaa gatgtccacg ctgccaaaaa gagccacaac cacgaagtcg caacatacac
     8941 gacggacggc tttatgagtt cttttgataa acaaaagatt gatcaattag tttcaccaga
     9001 agctggcgtg acaagcataa atggcaaaac agggattgtt gatttattcg cagcggactt
     9061 agatgcagca gagataaacc acacgcatgc agaagcaact actacagaaa gtggtttttt
     9121 ggcaaaagag gacaaagaaa aactagacgc gatgcaaata atcgcgctgg aaactattaa
     9181 ggaggttata gaatgactaa aattgtaaaa atgtcagaga aaaacgaaca tggaactcta
     9241 gaacaattct atccagaaac acatgcagag gctgttaaag gacttgtgtc ggtttcagag
     9301 gaagagaagg cgacatggaa cgagaaagaa actactgcgg gtgcggaaca aaaggcgaat
     9361 actgctttga atagtgcgaa ggattatgtt gatacgattg gaaaaggaac agtaatattt
     9421 aaaggggcca atattatggc tgctggtcaa aaatatacat ggaattcttc caaactgaaa
     9481 tttggaatca ctttattatt cagtcgttac gattcagcaa ataatactcc tttagattat
     9541 tattatcact ctgttttctt atcgaaagct caattagcag aattagcagg taaaggtttg
     9601 ttagttccta tgccctcagc aacttatggg gaaagaaaat atttatatgt ttctgaaaca
     9661 gaagttgctg gacacaatga taatactaat aatgcttctt gggcattacg tcagctaact
     9721 gtaatgtaac taaaaaggag gttttccatg gaagtcatac taaaaattgg gattttaggt
     9781 tttggcgcga tatttggata cttgtttggg gaagtggatt tattggtaaa agtgctggtg
     9841 tgctttattg tagctgacta tatttctggg ctactcgctt cagggtatct tggggaactt
     9901 agcagcaaaa tgggtttcaa aggaatcgcg aaaaaaatcg ctatcttaat tttagtggct
     9961 attgcgcatc aaatagattt gattcttgga acgcataata caacgcggga tgcggttatc
    10021 tttttctatt tggcgaatga gctgatttcc atcttggaaa attttgttcg aatgggaatg
    10081 aaggtcccgg aagtattgaa aaatttaatt ttgattttcg attctaagtc aggggacgag
    10141 gaggaaaagc atgacaaaga tatggattga cgctggacac ggtggtaagg attcaggtgc
    10201 gagtggtaat ggacttgttg aaaaaaattg ggtactaact gtagcaaaac aacttcaaac
    10261 ggagttagtt aaagctggtt ttgaagtggg aatgacaagg acaaatgata cattctatga
    10321 attaagtgat cgtgcgaaga aggcgaatag ttttaaagct gatttattta tttcgcttca
    10381 ttttaatgct ggtggcggta aaggatatga agattatatt tacacatccg tcccggctgc
    10441 aacggtagaa atacagaaaa tcattcataa aaatattatt gctaaagtta ctaaacacgg
    10501 aatgaatgat cgtgggatga agaaggctaa ttttgctgta ttaagagaaa cagcaatgga
    10561 cgctatctta ctggaagctg gtttttgtga tagcactgat gcattaattc ttgagaagaa
    10621 agcttatcaa actgattatt gtttaggaat tgtagcagca gtacaagaga tttttggggc
    10681 tatggtaaca aaatataggg caggtaaata tttgacaagt gatgatgcta tatcaggcac
    10741 aaatattaaa ggatatttag aagcaggaac aaaggttttt gtttataaag aaacagaaaa
    10801 aacgcttaat ttaactacta caaagggtgt tccaggaagt tgggttttaa aaacagaagt
    10861 taatacagga aaaagataaa aaaggagcgg ccaatttggc tgctcctttt tctcaattaa
    10921 cttctcttcc gcaaaacata aagcgcagta gtcgttaaaa caataccgaa tacagttgca
    10981 aatccagctg tatcaccagt tgttggtaag gatgtgttag cagaagttcc tgttgttgat
    11041 gtgtttggtg tcgtagttgt cggatcttcg gtagtagtag ttccgccgtt tgtgccggag
    11101 ccgttaccgt tatttgttcc gccatttcca tctgtgccac cgttatttcc gtttccatta
    11161 ccattgtccg tgccgccgtt tccattatct ggaggagttg ttgccgcagc ttgaaccgtt
    11221 gcttggaaag tggtgctgta tccgttcggg tcagtgatag ttgttgtgat ttggtcgcct
    11281 tttttaaggt ttaaagatgt tacatctacg gaaaacttgc catttgcgtc agctgttgcg
    11341 ttaggtccgg cagcaagggc cattcttgcg ttagcagttg ctttttgaac agagacagtt
    11401 gcgccaggca aagttgttcc agttagagtt ttgtcttttt cggctagttt attgattttt
    11461 gttgcgtctt tgattgcttt gatagctgca tcttcggttt ctttgtcgat ttcagcttgg
    11521 gatttgtaga ctttacgtcc ttctttttga gctgtaatga cttttccagc agctttttgg
    11581 tctttgatgt agttgatgaa tgtttcagtg tctgggtcga ttgcagttac taggtttgct
    11641 tttttgaagg cagaaaatcc atcgccaccg ccaaatagga agtcattgat tacgactttg
    11701 tatttttggt cggcttttaa aggagttccg tcttctgttg taacgcttgc aactttgtac
    11761 gcatgatcta agtcatctgt atcagtgaaa gtatatttta atccagaaat ttgtaggaaa
    11821 taagtttggt tgcttaaata ttgttggttt agagcttcca aaatatcagc accagtcatt
    11881 tctactactt gaagaatgtt accaaatggt tgaacagctt gtgccgcgcc ccatgtgatt
    11941 tcgttttggc catttgcaag acgagtagta aggtcagaac gaattccgcc gttgttagtc
    12001 atagcaaagt cgacatcggc gccggcttta tttgccatgt aacgttgcgc atctgtaatc
    12061 atgttaccaa gctctgattc tttatcatca attgctttgt tgtctggatt ggtgtcacga
    12121 gaaataacgt ctttattggc tagtccgata gtttcgttga taaccccttc aatgcggctt
    12181 ttcgcatctt cagtaacagc tgtaatatcg gcatttggtg tgacgcttct cgtgttgtat
    12241 gtaattttag cgtcaggtgg tgtaacgaaa tcgccggtag ttttatcaag ttcgccagtt
    12301 acatctgaaa aagctttacc attgttgtaa ctttgaacga tacgagtttt tccgactaat
    12361 ccatttgtgt attggtgatt gtgtccagca agaactaaat cgaccgagtt atttgggtct
    12421 aattcatttg cttttgtgat catattagca gcttcgccag ctacatcttg ttttgttcca
    12481 gtgttaggat ttccagtaga aagtgcggga acgtgagata gaacaacgat tgcgttaacg
    12541 ccttggcctc ttagttcagc agagtattta acgattgttt ctgcttcgtc aaggaaatcg
    12601 tagtctttaa tatgatttgc aagaactaaa ttaggaattt ctgttgtaac gataccgatg
    12661 aagccaactt tgacgccatc aatttctttt acatagtatg gtaaaaagcc ttctgcgact
    12721 gtgtttgttc ctttgttgac cacgttagct gcgacgattt tcatgtcact tttaacgcgt
    12781 ggataagctt ctacgattgg tccgaatttg tttgtagaaa ctccgtccaa aattcgtttg
    12841 tattctggta atccttcatc aaactcatgg ttacctaatg tgccgacttc gaaattcatt
    12901 ttttggagaa ctttcatcgt tggctcgtct tgaagtaaac ctgatactgc tggacttgcg
    12961 ccgaccatgt cgcccgcttg aacacggata gcattgtcag ttgtcgcccc aggatttgcc
    13021 tgtaaaaatg agttagtggc attatccaaa ttggtagcta agtaatctgc tccgccaatt
    13081 ggtgagcctg atgcatcttt agaggctgtt tcaagcgctc cgtggaaatc atttattccc
    13141 aaaatctgaa tgggaacggt atccgctgct gcttgtgctg ttgtcccggt gaatggtgct
    13201 gtaagtccga ttgtgagccc tgctacgagt aaaacatgtg tagttttctt gaaaaatttg
    13261 ttcactttca cactctccct tttttcgcca gtggcaattt tgtaagcgct aactcatagg
    13321 tgcctagcta taattgtagc aaagaggaat caccctagca ataggaaata tggattttgt
    13381 gtaaatgtag tgataatatt tggctatatt ttcatttcga tggaaaaaag ggtaaactag
    13441 agaaaaagga gggataagat ggatatctca agtacggaaa tatgggatgc aattaggaga
    13501 aatagttatt tgctatatta tcaaccaaaa gtagacgcga aaacgaataa aattattggc
    13561 tttgaaggtt tgattcgatt aaaaacggca acaaccattt tggctccaat tgatttcttt
    13621 gatgatattg tccttttaaa tgcaacgcgg gaaatgcaag attttgttgc tgaaacagcg
    13681 ataaaacaga ttaatcagct aggaggacgt ttttcaattt cgattaatat tccggcacat
    13741 tatgtagcga gcagtacgta tatgactttt ttacatgatt atgtgaaaga acatttaaag
    13801 tatccggaat gcttagaaat agagattatc gaacgaggcg aaataacgga actagctata
    13861 gcggataaaa acttacgaaa aataaaagac cttggtgtca aagtaagtat ggatgatttt
    13921 gggaaaggtt atagttcgct tgcgtattta cgcagcttac cgattgatat tgtgaaaaca
    13981 gatatgtcct ttatcgcgct tttaaaaaca gatcgaaaac aacaaattat tattcgagcg
    14041 attgtcaatt tgtgtcatga tttaggcggg aaagtagtta cagaaggcgt agaagacatg
    14101 gagcaagtcg aaaaattacg ggaaatgaaa gtagactatt tccagggcta ttattttagt
    14161 cgaccactac cgatggaaga tattaaagaa aaatattcct ttgtgtaaga tgtataaata
    14221 aaaaattggt tggtgtgaga atggtaattt accaaattca caccaaccaa ttttatttta
    14281 tttgattaaa ttatttgaag catcttttac aaccacgtca tgcgcgccgc cttctacgat
    14341 agaagtggac gaaacaaggg tgatttttgc tttttgttgt aattcaggga tattgagcgc
    14401 gccgcagtta cacatagtag agcgtacttt gctaaggctg atggcaacat tgtctttcaa
    14461 agatccagcg taaggaacat aagaatctac gccttcttca aaagataatt tcttgtcgcc
    14521 gccaaggtca taacgttgcc agttgcgcgc gcggttagct ccttcacccc aatattcttt
    14581 catatacgtg ccgtttaaat tcactttatt agtaggactt tcgtcaaaac gagagaaata
    14641 acgaccaagc atgataaagt cagcgcccat tgctagagct agcgtcatgt ggtagtcata
    14701 aacaattcca ccatcagaac aaatcggaat atatacacct gtttcttcaa aatattcatc
    14761 gcgtgcttta gccacatcaa ttagtgcagt tgcttgcccg cgtccgatac ctttttgttc
    14821 acgcgtgata caaatggaac caccaccaac gccaacttta acgaaatctg cgccagcttc
    14881 tgcaagataa cggaaaccat cgcggtcaac aacattccct gcgccaactt tgaccgtatc
    14941 gccgtattta ccgcgaacgt agtcaagtgt gcgtttttgc cattcggagt aaccctcaga
    15001 ggaatcgata cacagaatat ctgcgccagc ttcaactaga gcggggacac gttcttcgta
    15061 gtcgcgcgtg ttaataccag ctccaacaac gtaacgtttg gaggaatcaa gtagttctaa
    15121 tttattttct ttattagagt catagtcttt gcggaatacc atatggacta ggtgctcgtt
    15181 atcgtctaca agtggtaggg catttaattt gttgtcccaa ataatgttgt tagcttcttt
    15241 taaagtggtc gatttgttag cagtaactaa tttttcgaaa ggagtcatga aatctgctac
    15301 tttttcatca gggctcatgc gcgttacgcg gtagtcgcga cttgtcacga ttccaagtaa
    15361 tttaccgtgc gctgtgccgt cttctgtaac tgctactgta gaatgacccg ttttttcttt
    15421 taaattaagg atgtcttgaa gtgttttgtc agggctgatg ttggaatcac taataacgaa
    15481 accagcttta tgatttttca cgcgagaaac cattgcagct tcactttcga tggactggga
    15541 gccgaagatg aatgatacgc caccttctgt cgcaagcgca atccccatat tatcatcaga
    15601 aacagcttgc ataattgcgg aaacaagcgg aatgttcatt gtgatagcag attcttcccc
    15661 ttttttaaat tttacgattg gtgtttttaa gctaacattt gttggaacac attcagcgga
    15721 tgagtagcct gggacaagta aaaattcact aaatgtgcgg gacggttctt caaaataaaa
    15781 tgccattatt tccactcctt cttctatttt taaatgaatt tataaaatat ctttattatt
    15841 tcaataactg gatggaaagt caatgattgg gggagctttt tcggacgttt tcttttgggg
    15901 gaagagtgga atagatgaaa ggtagagaaa ctttggcgaa ggaggtaatc agatggacga
    15961 agaaacattg ctagaacgtg gctaccggaa gtatcgcggg gcggaggtag atatttattt
    16021 taatacaaat atttgcgagc attcgggtaa ttgtgtaaaa ggtaacgcag aactttttaa
    16081 tttggataga aaaccatgga ttatgccgga taatgtatcg aaagaagaag cgaaacgggt
    16141 gattcatact tgcccgagtg gagcgcttca atatatcgaa aaataggagg atatcagatg
    16201 gaatataaaa acggtgaaaa tagaatttat gcggtaaatg atgaaggagt cgaggttggt
    16261 gaagtgactt ttgtgccaac tggggaagat atgtttatta ttgaccatac aggcgttgat
    16321 gatgcggctc gaggtcaggg aatagcgcaa gaacttgtga aacgtgcggt cgaaaaagcg
    16381 aaaacagaag gaaagaaaat tgttccgctt tgtccgtttg cgaaagcaga atttgctaag
    16441 aagccggaat atcaagaagt acaagctgca aaataagaag tgtagactag gttttatgcc
    16501 tagtctattt ttataaaaaa ttttagaatt ccggttttct cttcttga
//
LOCUS       DASDYO010000062        16471 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.062, whole genome shotgun sequence.
ACCESSION   DASDYO010000062 DASDYO010000000
VERSION     DASDYO010000062.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16471)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16471)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16471
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.062"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..278)
                     /locus_tag="U0290_001679"
     CDS             complement(<1..278)
                     /locus_tag="U0290_001679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301723.1"
                     /translation="MIFQRLLKTRDTEFYRVIQNGNIEDVFGYLLIHDKREPAEIDDF
                     KVFAKSNINKEAFSVNIKKNHIYTMFFHFTDLEEEQEIPKFTKVIRFI"
     gene            784..2139
                     /gene="dnaA"
                     /locus_tag="U0290_001680"
     CDS             784..2139
                     /gene="dnaA"
                     /locus_tag="U0290_001680"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chromosomal replication initiator protein DnaA"
                     /protein_id="HEM2301724.1"
                     /translation="MQSIEDIWQETLQIVKKNMSKPSYDTWMKSTTAHSLEGNTFIIS
                     APNNFVRDWLEKSYTQFIANILQEITGRLFDVRFIDGEQEENFEYTVIKPNPALDEDG
                     IEIGKHMLNPRYVFDTFVIGSGNRFAHAASLAVAEAPAKAYNPLFIYGGVGLGKTHLM
                     HAVGHYVQQHKDNAKVMYLSSEKFTNEFISSIRDNKTEEFRTKYRNVDVLLIDDIQFL
                     AGKEGTQEEFFHTFNTLYDEQKQIIISSDRPPKEIPTLEDRLRSRFEWGLITDITPPD
                     LETRIAILRKKAKADGLDIPNEVMLYIANQIDSNIRELEGALIRVVAYSSLVNKDITA
                     GLAAEALKDIIPSSKSQVITISGIQEAVGEYFHVRLEDFKAKKRTKSIAFPRQIAMYL
                     SRELTDASLPKIGDEFGGRDHTTVIHAHEKISQLLKTDQVLKNDLAEIEKNLRKAQNM
                     F"
     gene            2333..3478
                     /gene="dnaN"
                     /locus_tag="U0290_001681"
     CDS             2333..3478
                     /gene="dnaN"
                     /locus_tag="U0290_001681"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit beta"
                     /protein_id="HEM2301725.1"
                     /translation="MKFVIERDRLVQAVNEVTRAISARTTIPILTGIKIVVNDEGVTL
                     TGSDSDISIEAFIPLIENDEVIVEVESFGGIVLQSKYFGDIVRRLPEENVEIEVTSNY
                     QTNISSGQASFTLNGLDPMEYPKLPEVTDGKTIKIPINVLKNIVRQTVFAVSAIEVRP
                     VLTGVNWIIKENKLSAVATDSHRLALREIPLETDIDEEYNIVIPGKSLSELNKLLDDA
                     SESIEMTLANNQILFKLKDLLFYSRLLEGSYPDTSRLIPTDTKSELVINSKAFLQAID
                     RASLLARENRNNVIKLMTLENGQVEVSSNSPEVGNVSENVFSQSFTGEEIKISFNGKY
                     MMDALRAFEGDDIQISFSGTMRPFVLRPKDAANPNEILQLITPVRTY"
     gene            3586..4929
                     /locus_tag="U0290_001682"
     CDS             3586..4929
                     /locus_tag="U0290_001682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM2301726.1"
                     /translation="MMKDMTTGNPTKLIFLFAMPMLIGNLFQQFYTMIDAVIVGKFVS
                     VDALAAVGATNSVNFFMISLIIGLMSGISVVVAQYFGFKDFDRLKDVIATATYAVVFS
                     AIILTVAGVLLAKPLLILLRTPANILDDSTIFLTTLFIGILPMSLYNGMAAILRALGN
                     SITPLIFLILSSLMNIALDFLFVVYMDMGVRGAAIATVLSQTAAAIAVIYYAYRHVPF
                     MRIERAKFKLSTPLLKEMVRIGLPSGLQGSFISIGNMALQSLINGFGSSVVAAYTAAS
                     RIDSLTYQPGIAFGAASSMFAGQNIGAGKIDRVREGFWSGIKVVTAISIGITILVQLF
                     AREFLLLFVDSSETEVINIGVSYLLIVSLFYVVVGVLFVVRETLRGTGDAMVPLAMGI
                     FELVSRLVIGFVLSLYIGYIGLWWATPVAWITATMLGVWRYKSGAWQKKAVIRRK"
     gene            5109..5330
                     /gene="yaaA"
                     /locus_tag="U0290_001683"
     CDS             5109..5330
                     /gene="yaaA"
                     /locus_tag="U0290_001683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S4 domain-containing protein YaaA"
                     /protein_id="HEM2301727.1"
                     /translation="MAETVKINSEFVTLGQLLQMIDVVSTGGMAKAYLSENTIYINGE
                     QDNRRGKKLRNGDVILVPGVGKVKIEQGK"
     gene            5334..6446
                     /gene="recF"
                     /locus_tag="U0290_001684"
     CDS             5334..6446
                     /gene="recF"
                     /locus_tag="U0290_001684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication/repair protein RecF"
                     /protein_id="HEM2301728.1"
                     /translation="MHLESIVLRNFRNYENLELEFSPSVNVFLGENAQGKTNLLEAVL
                     MLALAKSHRTTNDKDFIMWEKEEAKMEGRIAKHGQSVPLELAITQKGKRAKVNHLEQK
                     KLSQYVGNLNVVIFAPEDLSLVKGAPGIRRRFLNMEIGQMQPIYLHNLSEYQRILQQR
                     NQYLKMLQMKRKVDPILLDILTEQFADVAINLTKRRADFIQKLEAYAAPIHHQISRGL
                     ETLKIEYKASITLNGDDPEVWKADLLQKMESIKQREIDRGVTLIGPHRDDSLFYINGQ
                     NVQDFGSQGQQRTTALSIKLAEIDLIHEETGEYPVLLLDDVLSELDDYRQSHLLGAIE
                     GKVQTFVTTTSTSGIDHETLKQATTFYVEKGTVKKS"
     gene            6495..8435
                     /gene="gyrB"
                     /locus_tag="U0290_001685"
     CDS             6495..8435
                     /gene="gyrB"
                     /locus_tag="U0290_001685"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA topoisomerase (ATP-hydrolyzing) subunit B"
                     /protein_id="HEM2301729.1"
                     /translation="MSEENITNVQENASDYNEDQIQVLEGLEAVRKRPGMYIGSTSQR
                     GLHHLVWEIVDNAIDEALAGFCTEIEITIEADNSITVRDNGRGIPTGINEKIGRPTVE
                     VIFTVLHAGGKFGGGGYKVSGGLHGVGASVVNALSTSLEVYVHREGQKYYQRFERGDV
                     VMDMEEQGETDYRGTIVHFTPDPQIFTETTEFDFDTLRTRTRELAFLNRGLTISIEDK
                     REEHKVRKDFHYEGGIRSYVEHLNKAKDVIHEPPIYLEGERDDIMVEISMQYNTGFSS
                     NIISFANNIHTYEGGTHESGFKTALTRVINDYARRNKLFKDSDDNLSGEDVREGLTAI
                     ISIKHPDPQFEGQTKTKLGNSEARSITDKLFSEALNKFMMENPDVAKKIVEKGVVASR
                     ARLAAKRAREVARKSSGLEISSLPGKLADCSSRNPEISELYIVEGDSAGGSAKQGRDR
                     LFQAILPIRGKILNVEKARLDRILANEEIRTIFTAMGTGFGGDFDVSKSRYHKLIIMT
                     DADVDGAHIRTLLLTLFYRYMRPLLDAGYIYIAQPPLYQIKHGKQIEYVYSDGQLEDY
                     LASLDGDTKYSIQRYKGLGEMNPEQLWDTTMNPEHRTLLQVNIKDAIDADETFEMLMG
                     DRVEPRRKFIEDNAQYVKNLDV"
     gene            8530..11058
                     /gene="gyrA"
                     /locus_tag="U0290_001686"
     CDS             8530..11058
                     /gene="gyrA"
                     /locus_tag="U0290_001686"
                     /EC_number="5.6.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA gyrase subunit A"
                     /protein_id="HEM2301730.1"
                     /translation="MAETPNQRITEINLNKEMRTSFLDYAMSVIVARALPDVRDGLKP
                     VHRRILYAMNDLGMTSDKAYKKSARIVGEVIGKYHPHGDTAVYFTMVRMAQDFSYRNM
                     LVDGHGNFGSVDGDMAAAMRYTEARMSKISMELLRDINKDTIDYADNYDGSEREPVIL
                     PARFPNLLVNGSSGIAVGMATNIPTHHLGEVIDGVLALSHDPDITIRDLMEYIPGPDF
                     PTAGMIMGRSGIRRAYESGRGSITVRGRVDIEEKKNGKETIVITEIPYQVNKARLVER
                     IAELAREKKIDGITSLNDESDRSGMRIVIEVRRDISASVIVNNLFKMTALQTTFGINM
                     LALVDNHPKVLNLKEILYHYLEHQKVVIRRRTEFELRKAEARAHILEGLRIALDNIDA
                     IIKLIRGSKTSDVAKEGLMTQFNLSDKQAQAILDMRLQRLTGLEREKIEEEYQNLVAL
                     INDLKAILADDERILEIIREELEEIKVKYADKRRTEILAGDLVSLEDEDLIPEEEVAI
                     TLTKRGYIKRLPLSTYRSQRRGGRGIQGMSTHEDDFVEHLVATSTHDTLLFFTNTGKV
                     YRSKGYEVPEYGRTAKGIPIINLLGIESQEQVNAVINLSEFTDDSYLFFTTKHGVVKR
                     TTLSQFAKIRQSGLRAVELRENDELISVQMTDGSKNMIIATKHGQSIYFPEENIRVMG
                     RTAAGVRGIRLREDDEVIGMEVLEDDEKVLVVTEKGYGKQTPASQYPLRNRGGMGVKT
                     VTITEKNGNLVAMKTVTGEEDLMLMTVSGVLIRFEIDTVSQTGRSAMGVKLIRLDEDE
                     KVATVAKVPKEEDEVELEEEIDETLITQVPDESFEDAPGSDIEE"
     gene            11192..12706
                     /gene="cls"
                     /locus_tag="U0290_001687"
     CDS             11192..12706
                     /gene="cls"
                     /locus_tag="U0290_001687"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cardiolipin synthase"
                     /protein_id="HEM2301731.1"
                     /translation="MRKLIQFLFIAVVLFLVEYFLINQAAILFLVTSGLIQLCGLIIV
                     IRLLLFDQRNTSSKVAWIAVIFILPVLGTISYLVFGRNPATRKFSTAQVMEKAKLINA
                     IHAIPNNTNEKLPRLSKRIAHLTSIEPIKGNKIEILTNGEETFPVLLDALRKAENHIH
                     IQYYIFKTDEISTEIRDILVEKAKSGVEVRFMFDGLGSSKLHKAFLAPLKEAGVSIHA
                     FDPITSPWIVRTANLRNHRKIVVIDGQIGFTGGLNIGEEYRSNTPDFRVWRDTHIKIT
                     GQAVIELQESFLNDWVYMENQAGAADQFISEAGLQQYFSPVDVGDEWAQVIYGGPYDK
                     EKWVRDSMLDLIDSAKESVWIVSPYFVPDEESLAVIRRVAMSGVDVRVIIPGKGDRGI
                     SFHGSNAYVKTMIEAGAKMYAYADDSFVHAKAMLVDGTRAAIGTANFDVRSFRLNHEL
                     MVFLYDESEAMHHLKRDFEKDFEDSRLFTMKDMENKPLLTRIKEVLSSLLSPIL"
     gene            12722..13240
                     /gene="speG"
                     /locus_tag="U0290_001688"
     CDS             12722..13240
                     /gene="speG"
                     /locus_tag="U0290_001688"
                     /EC_number="2.3.1.57"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="spermidine N1-acetyltransferase"
                     /protein_id="HEM2301732.1"
                     /translation="MSGDLKLRPLEREDLKFVHRLNNDAKIMSYWFEEPYEAFVELQE
                     LYDKHIHDQSERRFILELDGQMVGLVELMEIDYIHRRAEFQIIIDPKFQGHGYAVSAT
                     KLAMKYAFHVLNLHKLYLVVDKVNEKAIHVYEKVGFIREGELIDEFFVDGTYHDAIRM
                     CIFQHQYQEMDI"
     gene            13382..14350
                     /gene="mvk"
                     /locus_tag="U0290_001689"
     CDS             13382..14350
                     /gene="mvk"
                     /locus_tag="U0290_001689"
                     /EC_number="2.7.1.36"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mevalonate kinase"
                     /protein_id="HEM2301733.1"
                     /translation="MATGIGTAKMILCGEHAVVYGEPAISVPFTQAIVTTNVENSTKT
                     KFSSAFFSGDLDDMPDFLAGIKALVVDVLNEIGKGECVSIHVVSGVPIGRGLGSSAAV
                     ATSIARGLYKYFNQELDSKKLLAIVNAAEKIAHGNASGVDAITVVSEKPVWYERDRKL
                     EIMHFSKKITFVVADTGVPSETRDAVKDVQALYKENQTEIGKIIHQLGDISREIKTHL
                     EGDADTVKIGAAMNKAQSYLETLTVSDSSLEKLIEVARSSGADGAKLTGGGRGGCIIA
                     VAKNQEIAEQITKELHNAGAAQEWIFTIGEGSYESDSHRTHECGAN"
     gene            14307..15278
                     /gene="mvaD"
                     /locus_tag="U0290_001690"
     CDS             14307..15278
                     /gene="mvaD"
                     /locus_tag="U0290_001690"
                     /EC_number="4.1.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diphosphomevalonate decarboxylase"
                     /protein_id="HEM2301734.1"
                     /translation="MRATAIAHTNVALIKYWGKRDEHLILPANSSLSFTVDKFYTKTT
                     VEWDENLAQDTFILNNEQKTDAKVARFIDKMREEFGISAKAKITSENHVPTAAGLASS
                     ASAFAALALAGSSAAGRKDTKEYISRLARFGSGSASRSVFGDFVIWEKGELADGSDSF
                     AVPFTNKLCDKMSLVVAVVSDKEKKVSSRDGMRLTVETSPFFEKWVSAAETDLEEMKQ
                     AILDEDFIKVGEITERNGMKMHATTLGAEPPFTYFQPKSLEIMDAVRELRENGIPAYF
                     TMDAGPNVKVICERENENIVADKLSGLAKNVLICHAGKEASVVSDEK"
     gene            15259..16338
                     /locus_tag="U0290_001691"
     CDS             15259..16338
                     /locus_tag="U0290_001691"
                     /EC_number="2.7.4.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphomevalonate kinase"
                     /protein_id="HEM2301735.1"
                     /translation="MYQMKNKLQVKIPGKLYVAGEYAVVESGHTAILTAVNRYITLTL
                     EDSERNELWIPHYENPVSWPIGGELKPDGEHWTFTAEAINIATTFLKSEGIELTPVKM
                     VIETELIDQSGAKYGLGSSAAATVAVINALMTKFYPEISMLKKFKLAALSHLVVQGNG
                     SCGDIASCMYGGWIAYTTFDQEWVKHRLAYKSLEWFMKEPWPMLQIETLEEPVPTFSV
                     GWTGTPVSTGKLVSQIHAFKQEDSKNYQHFLTRNNEIMKQIIQAFHTKDEELLYSSIK
                     ENRRILQELGTKAGVNIETSLLKELADSAENMGGAGKSSGSGGGDCGIAFSKTKELAE
                     KLVNEWEKLGIKHLPFHTGRVQITE"
BASE COUNT         5339 a         2802 c         3422 g         4908 t
ORIGIN      
        1 tctataaaac gaataacttt agtaaatttt ggaatttcct gttcttcttc taaatcggta
       61 aagtgaaaaa acatcgtgta aatatgattt tttttgatat tcactgaaaa agcttcttta
      121 tttatattac tttttgcaaa cactttaaaa tcatcaattt ctgctggttc ccgtttgtcg
      181 tgaattagta agtatccaaa cacatcttca atattcccgt tttgtataac tcgataaaat
      241 tctgtatctc tcgttttcaa aagccgttga aatatcattt ttcacaacct catttatttg
      301 tcttttttct tattctggta aatagtttaa cacattgtcg taatgaaatc cttttccgga
      361 aagtgtggat aactagttaa taacaccttt ttattgtgga taaccttttc aattagttta
      421 aacttataca caattagtgg ttaattacac acaatggctt gtggataatt aaatctaaca
      481 atttcgttac agatttcttt acacacaagt tatacacaag ttaactggct gtggacaacc
      541 gtttttcaca tctggacagt tttgtggata gattttgtaa gtccttgcta tcagagtgat
      601 tttctgatat tataattcct gtcgaataga aatatagctg gggaaaacta aagttatcca
      661 caatacattt ttactttgtg gataattttt taacagtgtt tggataacct tatccatggc
      721 tttttctatc tgtggataac tttatagcat ccatttacat tacataaaaa aggggggtta
      781 ctagtgcaat caattgaaga catctggcag gaaacactgc aaatcgttaa aaaaaatatg
      841 agtaaaccta gttacgacac atggatgaaa tcaacaaccg ctcattcact tgaaggtaac
      901 acgtttatta tttcagcgcc caataatttt gttcgcgatt ggttagagaa gagttacacg
      961 caatttatcg ctaacatttt gcaagaaata actggtcgct tatttgatgt ccgctttatt
     1021 gatggcgagc aggaagaaaa ctttgaatac actgtgatta aaccaaatcc agcgttagat
     1081 gaagatggca ttgaaattgg aaaacatatg cttaatccgc gttatgtttt tgatactttt
     1141 gtcattggtt cagggaacag atttgcccac gcagcatcac ttgcagtagc cgaagcacca
     1201 gcgaaagcat ataatccact cttcatttat ggaggagttg gcctcggtaa aacacattta
     1261 atgcacgcag ttggccacta tgttcaacaa cataaagata atgcgaaagt aatgtacctt
     1321 tccagcgaaa aattcaccaa tgagtttatt agctctattc gtgataataa aaccgaagaa
     1381 ttccgtacaa aataccggaa tgtggatgtc ttacttattg atgatattca atttttagca
     1441 ggtaaagaag gaacacaaga ggaatttttc catacattta acacacttta tgatgaacaa
     1501 aagcaaatta ttatttccag tgaccgacca ccgaaagaaa ttccaacatt ggaagatcga
     1561 ctgagatccc gctttgaatg gggcctaatt actgatatta cgccaccaga cttagaaaca
     1621 cggatcgcca ttttacgtaa aaaagcaaaa gcagacggat tagatattcc aaatgaagtc
     1681 atgctttaca tcgcaaacca aattgattcg aatattcgcg agctagaagg cgcactcatc
     1741 cgagtagttg cttattcttc cctcgttaat aaagatataa cagctggtct tgcagcagaa
     1801 gcactaaaag atattatccc ctcttctaaa tcacaagtta ttacaattag tggtattcaa
     1861 gaagcagtcg gtgaatattt ccatgttcgt ttagaagatt ttaaagcaaa aaaacggacg
     1921 aaaagtatcg cattcccgcg ccaaatcgct atgtatcttt caagagagct tacagatgcc
     1981 tcattaccaa aaatcggtga tgaatttggt ggtcgagatc atacaaccgt catccatgca
     2041 catgaaaaaa tatcgcaact actaaaaacc gatcaagtgt tgaaaaatga ccttgccgaa
     2101 attgaaaaaa atttaagaaa agcacaaaat atgttttaat agacctgtgt acaatgtgga
     2161 taactgaaac atacttaccc acaagttatc aacatgtgga aaactttatg tcgcatggct
     2221 tataacctac ttatccacaa atccacagcg cctattacta ttactacgat tttttattaa
     2281 ttaattaaag gtttttgagg ttttacaaaa tataaaaaaa tgggggatac tcatgaaatt
     2341 tgttattgag cgtgatcgtc ttgtccaagc agtcaatgaa gttactcgtg ccatctctgc
     2401 aagaacaacg attccaattt taacggggat aaaaatagtc gtaaatgatg aaggtgtaac
     2461 actaactggt agtgattccg atatttcaat cgaagcattt attccattaa ttgaaaatga
     2521 tgaagtaatt gtagaagtgg agagttttgg tggaattgta cttcaatcaa aatactttgg
     2581 cgatattgtt cgtcgtttac cagaagaaaa tgtagaaatt gaagtgactt ctaactacca
     2641 aaccaacatt agttctggcc aagcatcctt tacattaaat ggcttagatc caatggaata
     2701 tcctaaatta cctgaagtaa cagacggaaa aacaattaaa attccaatta atgtacttaa
     2761 aaatattgtt agacaaactg tttttgctgt gtctgcgatt gaagttcgtc cagtacttac
     2821 tggtgtaaac tggattatca aagaaaataa actaagcgca gttgcaaccg atagtcatcg
     2881 tctagcttta cgtgaaatac ctcttgaaac agacattgat gaagaataca acattgttat
     2941 tcctggaaaa agtttatctg aattaaataa acttttagat gatgcaagcg aatctattga
     3001 aatgaccctt gccaacaacc aaattctttt taaattaaaa gatttattat tttattctcg
     3061 tttacttgaa ggtagttatc cagatacatc tcgattaatt ccaactgata ctaaatcaga
     3121 attagtcatt aattccaaag catttttaca agcaattgac cgtgcgtccc tacttgctcg
     3181 cgaaaatcgt aataacgtta ttaaattaat gacgctagaa aatggccaag tagaagtatc
     3241 atccaattct ccagaagttg ggaatgtttc tgaaaatgtc ttcagccaaa gttttactgg
     3301 cgaagagatc aaaatatctt ttaacggtaa atacatgatg gatgccctac gtgcttttga
     3361 aggtgatgat attcaaattt ccttctccgg tacaatgaga ccattcgtac ttcgaccaaa
     3421 agatgcagcc aatccaaatg aaattttaca attaatcacg ccggttagaa cttactaatc
     3481 tcgcaaaaag cacatccgtc ttggtttcaa ggcggattct ttttttgtta tagtacagtt
     3541 tttggataga aatgtatatt tatgcaaacg gaggtaattc ttagcatgat gaaagatatg
     3601 acaacaggta atccgacaaa attaattttt ttattcgcga tgccgatgtt gattggaaac
     3661 ttgtttcagc aattttatac gatgattgat gctgttattg ttgggaaatt tgtcagtgta
     3721 gatgcgctgg ctgctgttgg agcgacaaat tcggtcaatt tttttatgat ttctttgatt
     3781 attggactta tgagcgggat ttctgtcgta gtagcgcagt attttgggtt taaagatttt
     3841 gatcgtttga aagatgttat tgcaacggcg acttatgcgg tggttttttc ggcgattatt
     3901 ttaactgttg caggagtttt gctagcaaag ccattgctaa ttttacttag aactccagcg
     3961 aatattttgg atgattctac tatcttttta accactcttt ttattgggat tttaccgatg
     4021 agtctgtata acggaatggc cgcgatactt cgggcgcttg gaaattcgat tacaccgctg
     4081 atttttttaa ttttatcgtc cttaatgaat attgcacttg attttttatt tgtcgtatat
     4141 atggatatgg gcgttcgcgg ggctgctatt gcgacagttc tttctcaaac agctgcagca
     4201 attgccgtta tttactatgc ttatcgccac gtaccattta tgcggataga gcgcgcaaaa
     4261 ttcaagcttt ccaccccact acttaaagaa atggtgcgca ttggactacc ttctggatta
     4321 caaggatcct ttatttctat cggaaacatg gctcttcaaa gtttaataaa tggatttggt
     4381 tcatcggtcg ttgcggcata tacggcggcg agtcgaattg attcacttac atatcaacca
     4441 ggaattgctt ttggagcagc ttcttcgatg tttgctggtc agaacatcgg tgctgggaaa
     4501 attgaccgcg ttcgcgaagg tttttggtcg ggaattaaag tagttacagc tatcagcatt
     4561 ggaataacga ttttagttca acttttcgct cgggagtttt tattactatt tgttgattct
     4621 agtgagacgg aagttattaa tatcggtgta agttatttac ttattgtctc tttattttat
     4681 gtcgtagtgg gagttttatt tgttgttcga gaaacactca gaggcaccgg agatgcgatg
     4741 gttcctttag ctatggggat ttttgagtta gtttcgagac tggttatcgg atttgtttta
     4801 tcgctttata ttggttacat agggctttgg tgggctacac cagttgcgtg gattacagct
     4861 acgatgctcg gcgtttggag atataaatca ggagcatggc aaaaaaaggc agttattagg
     4921 cgaaaataac cattttagta aaaaaacgcc agagaagctc atattttctt ttttttaata
     4981 aataatatcc ccccattagt tttgctaaaa aaagctgaaa aacgaatata tgaaaatatt
     5041 ctttgtatta ttggcaaaac tttagtaaaa tagaaggtag tgataaaaaa agattgggcg
     5101 tgaaattttt ggctgaaaca gtaaagataa atagcgagtt cgtaacgctt ggtcaacttt
     5161 tacaaatgat tgatgtagtt tcaactggtg gaatggcgaa agcgtacctt agtgaaaata
     5221 cgatttacat caacggagag caagacaacc gccgggggaa aaagcttcgt aatggcgatg
     5281 ttatcttagt tcccggtgtt ggaaaagtga aaatcgagca aggaaaataa cagatgcatt
     5341 tagaaagtat tgttttaaga aatttccgga attacgaaaa cttagaacta gaattttccc
     5401 catctgttaa tgtttttctt ggtgagaatg cacaaggtaa aaccaacctt ttagaagccg
     5461 tattgatgct tgcacttgca aagtcacatc ggacaacgaa tgataaagat tttattatgt
     5521 gggaaaaaga agaagccaag atggaagggc gaatagcaaa gcacggacaa tcagtgcctt
     5581 tagagcttgc tatcacccaa aaaggtaagc gagctaaagt aaatcatttg gaacaaaaga
     5641 aacttagcca atatgtcggt aacttgaatg tggttatttt tgccccagaa gatttatcgc
     5701 ttgtgaaggg cgctccagga attagacgtc ggtttttgaa tatggaaatt ggacaaatgc
     5761 agccgattta tttgcataat ctaagtgaat accaacgaat attgcaacaa cggaaccaat
     5821 atttgaagat gttgcaaatg aaacgaaaag tagatccaat attactcgac attttgactg
     5881 aacagttcgc agatgtcgcc attaatttga cgaaaagacg agctgatttc attcaaaaac
     5941 tagaggcata tgcggcgcca attcatcacc aaatttcccg aggacttgag acgctgaaaa
     6001 ttgagtataa agcttccatc acgctaaatg gggacgatcc cgaagtgtgg aaagcagatt
     6061 tgctccaaaa aatggaatca atcaaacaaa gagaaatcga ccgtggtgtc acgcttattg
     6121 gaccacatcg ggatgattct ctgttttata ttaatgggca aaatgtgcaa gattttggtt
     6181 cgcaaggtca gcaacggaca acggcacttt ctataaaatt agcagaaatt gacctaatcc
     6241 atgaagaaac tggcgaatat ccggttcttc ttctcgatga tgtgcttagt gaactcgatg
     6301 attatcgtca atcgcatttg ctcggagcta ttgaaggaaa agtacaaacc tttgtaacga
     6361 caacaagtac gagcgggatc gaccatgaaa cgctcaaaca agcaacaact ttctatgtag
     6421 aaaaaggtac ggtaaaaaaa tcctaatcta ggttaatata atttgatgaa aaagaaagtg
     6481 cggtggaata attaatgtca gaagaaaata ttacaaatgt acaagaaaat gcttcagatt
     6541 ataacgaaga tcaaatacaa gtactggaag gtctagaggc agtaagaaaa agacctggta
     6601 tgtacattgg ttcaactagt caacgcggac tccatcacct ggtatgggaa attgttgata
     6661 acgcaattga tgaagcactt gctggttttt gtacagaaat tgaaattaca atcgaagctg
     6721 ataacagcat tactgttcgt gataacggac gtggaattcc tactgggatt aacgaaaaaa
     6781 ttggtcgtcc aacagtagaa gttatcttta ccgttctaca tgctggtggt aaatttggcg
     6841 gcggcggata taaagtatct ggcggacttc acggagttgg tgcatcggta gttaatgccc
     6901 tttccacatc tcttgaggta tacgttcacc gtgaaggtca aaaatattac caacgctttg
     6961 aacgtggtga tgtagtaatg gatatggaag aacaaggcga aacggattac cgtggaacaa
     7021 ttgttcactt tacgccagat ccacaaattt tcacagaaac aacggaattt gattttgata
     7081 cacttcgtac tcgtacgcgc gaacttgctt tcttgaatcg tggtttaacg atttcaattg
     7141 aagacaagcg cgaagaacac aaagttcgta aagatttcca ctatgaaggc ggaattcgtt
     7201 cttacgtgga gcatttaaat aaagcaaaag acgttatcca tgagccacca atttatttgg
     7261 aaggtgaacg cgatgacatt atggttgaga tttccatgca atataatact ggattctcaa
     7321 gcaatatcat ttcattcgca aataacattc atacgtatga aggcgggact cacgaatctg
     7381 gatttaaaac ggcgttaaca cgtgttatta atgactacgc gcgtcgtaat aaattgttca
     7441 aagatagtga tgataacctt tccggtgaag atgttcgtga aggtttaaca gcaatcattt
     7501 ccatcaaaca cccagatcca cagtttgaag gacaaacaaa aacaaaactt ggaaattcag
     7561 aagctcgttc aatcacggat aagctgtttt ctgaggcttt aaataaattt atgatggaaa
     7621 acccagatgt tgctaaaaaa atcgttgaga agggcgttgt agcttctcgt gcacgtctgg
     7681 ctgctaagcg cgcgcgtgaa gttgctcgta aaagcagtgg gttagaaatt tctagcttgc
     7741 caggtaaact agctgactgt tcttcccgta accctgaaat cagcgaactt tacatcgttg
     7801 agggtgactc agctggtggt tcagctaaac aaggtcgtga ccgtttattc caagctattt
     7861 tgccgattcg tggtaaaatt ttgaacgtgg agaaagcgcg tttagaccga attttagcta
     7921 acgaagaaat tcgaactatt tttacggcta tgggaactgg ttttggtgga gatttcgatg
     7981 tttctaaatc tcgttaccac aaattaatta ttatgactga tgctgatgtt gatggtgcac
     8041 atattcgtac actacttctt acgctatttt atcgttatat gcgcccactg cttgatgctg
     8101 gttatatcta tattgcacaa ccaccgcttt atcaaattaa gcacggtaaa caaatagaat
     8161 atgtatatag cgacggacag ttagaagact atctagcttc ccttgacgga gacactaaat
     8221 acagcattca acgatataaa ggtcttggag aaatgaaccc agaacaactt tgggatacaa
     8281 ccatgaatcc ggaacaccgt acactacttc aagtcaatat caaagacgct attgatgccg
     8341 atgaaacttt tgaaatgttg atgggtgacc gcgtggaacc tcgtcgtaaa ttcatcgaag
     8401 acaacgcgca atacgttaaa aacttggatg tttaataaat atttcccggg taataattgg
     8461 gttattaatt gtttttaaaa ggtttgaact agattcagcc ttacttttga aagggaggtt
     8521 tctctaacaa tggcagaaac accaaatcaa cgaataacag agataaactt aaataaagaa
     8581 atgcggacat cattcctgga ctatgcgatg agtgtaattg ttgcccgtgc cctaccagac
     8641 gttcgtgacg gattaaaacc agttcatcgt cgtattctat atgcgatgaa tgacttaggt
     8701 atgacttctg ataaggccta taaaaaatca gctcgtatcg ttggtgaagt aatcggtaag
     8761 tatcaccccc acggcgatac agcggtttat tttacaatgg ttcggatggc gcaagatttt
     8821 agttaccgta atatgctagt tgatggacat ggtaactttg gttcggtcga tggcgatatg
     8881 gcggcagcga tgcgttatac agaagcacgt atgtcaaaaa tttcgatgga acttcttcgc
     8941 gatattaata aagatacaat tgattatgct gataactacg atggttctga acgtgagcca
     9001 gtcattttac cagcgcgttt ccctaactta cttgtcaatg gttcgtcagg tattgcggtt
     9061 ggtatggcaa caaacattcc tacccaccat cttggtgaag ttatcgacgg cgttttagcg
     9121 cttagtcatg atccggatat tactattcgt gatttaatgg aatatatccc tggccctgac
     9181 ttccctactg ctgggatgat tatggggcgt agcggaatcc gtcgcgctta cgaaagtggc
     9241 cgtggttcga ttactgttcg tggtcgtgtc gatattgaag aaaagaaaaa tggtaaagaa
     9301 acaatcgtta ttaccgaaat tccttaccaa gtaaataaag cgcgcctagt tgagcgtatt
     9361 gccgaactag ctcgtgagaa gaaaatcgac ggtatcactt ccctaaacga tgaatctgac
     9421 cgttctggaa tgcgcattgt tattgaagtt cgtcgtgata ttagtgcaag tgttatcgtg
     9481 aataatttat tcaaaatgac agcacttcaa actacttttg gtattaatat gctcgcactt
     9541 gtcgacaatc atccaaaagt acttaattta aaagaaattc tttatcatta tttagagcat
     9601 caaaaagtag ttattcgtcg ccgtacggaa tttgagcttc gtaaagcaga agcgcgcgct
     9661 cacattttag aaggtttacg aattgcacta gataatattg acgcgattat taaattaatt
     9721 cgtggatcaa aaacttccga tgttgctaaa gaaggcttga tgacacaatt caacctttcg
     9781 gacaaacaag cgcaagccat tttagacatg cgtttgcaac gtttaacagg tttggaacgc
     9841 gaaaaaattg aagaagaata ccaaaactta gtggcattaa ttaatgattt aaaagccatt
     9901 ttagctgatg atgagcgtat tcttgaaatt attcgtgaag aattagaaga aatcaaagtt
     9961 aaatacgcgg ataaacgtcg tacagaaatc ttagctggtg atttagtaag ccttgaagat
    10021 gaagacttaa tccctgaaga agaagtggcg attacactaa ctaaacgtgg ctatattaaa
    10081 cgtttaccat tatcaactta tcgtagccaa cgtcgtggtg gtcgtggtat ccaaggtatg
    10141 tctactcatg aagatgattt cgtagaacat cttgttgcaa cgagcacgca tgatacgtta
    10201 ctattcttca ctaacacagg taaagtttac cgttcgaaag gttatgaagt acctgaatac
    10261 ggtcgtaccg ccaaaggtat cccaatcatc aacttacttg gaatcgaaag ccaagaacaa
    10321 gtgaatgccg tgataaatct atccgaattc actgatgata gctacctatt ctttactact
    10381 aaacacggtg tcgtgaagcg tacaaccctt tctcaatttg cgaaaattcg tcaaagtggt
    10441 cttcgtgcag ttgaacttcg cgaaaacgat gaactaatct ctgttcagat gacagatggt
    10501 agcaaaaaca tgattatcgc aacgaaacat ggacaatcta tctacttccc agaagaaaat
    10561 atccgcgtaa tgggccgtac agctgctggt gttcgtggta ttagacttcg tgaagacgat
    10621 gaagttatcg gtatggaagt ccttgaggat gatgaaaaag ttctcgttgt aacggaaaaa
    10681 ggatacggta aacaaacacc ggcttcccag tacccgcttc gtaatcgcgg tggtatgggt
    10741 gttaaaaccg ttacaatcac agagaaaaat ggtaacttag tcgcaatgaa aacagtgact
    10801 ggtgaagaag acttaatgct aatgacagta agtggcgtat taattcgttt cgaaattgat
    10861 acagtatcac aaacaggtcg tagcgcaatg ggtgtcaaac taattcgtct tgatgaagat
    10921 gaaaaagtag ctactgttgc aaaagtgcca aaagaagaag atgaagttga gcttgaggaa
    10981 gaaatcgatg aaacattaat cacacaagtt cctgatgaaa gttttgaaga tgctcctgga
    11041 agcgatatag aagaataaaa tcaagctgga gatgactcta atttgcgaat tagaacgatt
    11101 ttccagcttt tttccagtat aaaaagcgct ttttggctat aatttatgta taatatcctt
    11161 aatacgtctt aaaaagggaa gagttgaaca aatgcgcaaa ctgattcaat ttctgtttat
    11221 agcagtagtt ttatttttag tggaatactt tttaatcaat caagcagcta tattattctt
    11281 agtaacaagt ggacttatcc aattatgcgg attaattatt gtgattcggc tactactctt
    11341 tgatcaacgg aatactagct caaaagtcgc ctggattgcg gttattttca ttttacctgt
    11401 acttggaacg attagttacc ttgtgtttgg tagaaatcca gcaactagaa aattcagcac
    11461 agctcaagta atggaaaaag ctaaattaat taatgcgatt cacgcaattc caaacaacac
    11521 taatgaaaaa ttaccacgac tatctaaaag aattgcgcat ttaacgtcca tagagccaat
    11581 taaggggaat aaaatcgaaa tattaacaaa tggcgaagaa acttttccag tgctcttaga
    11641 cgcgcttaga aaggctgaaa accacattca tattcaatac tatattttca aaacggatga
    11701 aatttctaca gagattcgtg atattttggt agaaaaggcg aaatccggtg ttgaggttag
    11761 gtttatgttt gatggacttg gttcaagcaa acttcataag gcatttttag cgcctctaaa
    11821 agaagctgga gttagtattc atgcgtttga tccaatcaca tccccatgga ttgtaaggac
    11881 tgccaacttg cgaaatcacc gtaaaattgt cgtgattgat ggtcaaattg gctttacagg
    11941 cgggcttaat attggagaag aatatcgttc taatacacca gatttccgtg tttggcgcga
    12001 tacacatatt aaaatcacag gccaagctgt tatcgaactt caagaatctt ttctaaatga
    12061 ttgggtctat atggaaaacc aagcaggtgc tgcagatcaa tttattagtg aagctggatt
    12121 acaacaatat ttttcaccag ttgatgtggg tgacgaatgg gcgcaagtga tttacggcgg
    12181 accatatgat aaagaaaaat gggttcgcga ttcgatgctt gatttaattg attccgctaa
    12241 agaatctgtt tggattgtgt cgccttactt tgttccagat gaggagtcgc ttgcagttat
    12301 tcgccgggtt gcgatgagcg gtgttgacgt gcgagttatt attccaggca aaggtgatcg
    12361 cgggatttca ttccacggaa gtaatgcgta tgtgaaaaca atgattgaag caggcgcgaa
    12421 aatgtatgct tatgccgatg attcttttgt tcatgcgaag gcaatgctag tggacgggac
    12481 gcgtgcagct ataggtactg ccaattttga cgtgcgtagt tttagattga atcatgaatt
    12541 aatggtattc ttatatgatg aaagcgaggc tatgcatcat ttaaaacgtg attttgagaa
    12601 agattttgaa gatagccgac tgtttacgat gaaagatatg gaaaacaaac cattattgac
    12661 tcgtataaaa gaagttctat ctagtttact atcaccaatt ttataattta ggagtgggaa
    12721 aatgagtgga gatttaaaac ttagaccgct tgaacgagaa gatttaaaat ttgttcaccg
    12781 gttaaataat gacgcgaaaa taatgtctta ttggtttgaa gagccatatg aggcgttcgt
    12841 cgagcttcag gagctatatg ataagcacat tcacgatcag tcagaacgcc gttttatttt
    12901 agaattagat ggccaaatgg ttggattagt tgagttaatg gaaattgatt atattcacag
    12961 aagagccgaa tttcaaatta ttattgatcc taagtttcag ggacacggtt acgctgtttc
    13021 tgccacaaaa ctcgcaatga aatatgcttt tcacgtacta aatctgcata aactatattt
    13081 agttgttgat aaagtaaatg aaaaagctat tcatgtctat gaaaaagttg gttttattcg
    13141 tgaaggcgaa ctaattgatg agtttttcgt tgatggaact tatcatgatg ctattagaat
    13201 gtgtattttc caacatcaat atcaagaaat ggatatttaa aaggtgattg gcgcgggaaa
    13261 agttgcgcca atcattgttt tgggtcaaaa aaagttctat aataaggttt tagtgaaaaa
    13321 attatggtat catgaagtat taaagtttgt actattttga tggagaaagg attggcgtac
    13381 attggctaca ggcattggga cagctaaaat gatattatgc ggagaacatg cagttgtata
    13441 cggagaaccg gcgatttcag tcccatttac acaagcaata gtaacgacaa atgtagaaaa
    13501 ttctacaaaa accaaatttt cttcggcatt tttttcaggt gatttagatg atatgcctga
    13561 tttcttagca ggaatcaaag cattagttgt agatgtttta aatgagattg gaaaaggcga
    13621 atgcgtttct atccatgtag tttcaggtgt tccaattgga cgaggtttag gttcaagtgc
    13681 cgctgtagca acaagtattg cgcgtggctt atataaatat tttaatcaag aattagactc
    13741 gaaaaaatta ttagccattg tgaatgcggc agaaaaaatt gctcatggaa atgctagtgg
    13801 tgttgatgct atcacggttg tgagtgaaaa accagtatgg tatgagcgag atcgaaaact
    13861 agaaattatg catttttcaa aaaaaatcac gttcgtagta gcagatactg gagttccaag
    13921 tgaaaccaga gacgcggtga aggatgttca agctttatat aaagaaaatc aaacagaaat
    13981 tggtaaaata attcatcaac tcggcgatat ttcccgggaa ataaagactc atttagaagg
    14041 cgatgcagat actgtgaaaa taggtgctgc aatgaataag gcacaatctt atttagaaac
    14101 tttgacagta agtgatagta gtttagagaa attaatagaa gtagctagaa gtagtggtgc
    14161 agacggggca aaacttacag gtggcggtag aggtggatgt attatcgctg tagcaaaaaa
    14221 tcaagaaatc gctgaacaaa taacgaagga gcttcataat gctggagctg cacaagaatg
    14281 gatttttacg attggagaag gtagttatga gagcgacagc catcgcacac acgaatgtgg
    14341 cgctaattaa atactgggga aaacgcgatg aacacttgat tctacctgca aacagtagtt
    14401 tatccttcac ggtagataaa ttttatacaa aaacaacggt agaatgggac gaaaacttag
    14461 cccaggatac atttattcta aataatgaac aaaaaacgga tgcaaaagta gctcgtttta
    14521 tagataaaat gcgtgaagaa ttcggtattt cagcaaaagc aaaaatcact tccgaaaatc
    14581 acgttccaac tgcggccggg cttgcttcat cggcttctgc atttgcagct cttgcacttg
    14641 ctggatctag cgctgctggc agaaaagaca caaaagaata tatttccaga ctggctcgtt
    14701 tcgggtctgg ttctgcttct cgttccgttt tcggagattt tgtcatttgg gaaaaaggcg
    14761 aactcgcgga cggtagtgat tcatttgcag tacctttcac caacaaatta tgtgacaaaa
    14821 tgtctcttgt agtcgcagtc gtttcggata aagaaaagaa agtttctagt cgggatggaa
    14881 tgcgcctaac tgttgaaaca tcaccgtttt tcgaaaaatg ggtttctgct gctgaaacag
    14941 acttggaaga aatgaaacaa gctattttgg atgaagattt catcaaagtg ggcgaaatca
    15001 cagaacgaaa cggaatgaaa atgcatgcga caacgcttgg tgccgagcct ccatttactt
    15061 attttcaacc gaagtccctt gaaataatgg atgctgttag agaattacga gaaaatggta
    15121 taccggccta ttttacaatg gatgctggtc caaatgttaa agttatttgt gagcgtgaaa
    15181 atgaaaatat cgtagcagat aagttgtcag gtttggctaa aaacgttcta atttgccacg
    15241 ctggtaagga agcgagtgtt gtatcagatg aaaaataaac tacaggttaa aatacccgga
    15301 aaattatatg tagctggtga atatgcagtt gtagaatcag gtcatacggc tattctaact
    15361 gcagttaatc gttatataac gctaactctt gaagatagtg aacgcaatga attatggatt
    15421 ccacattatg aaaatccagt ttcatggcca attggcggag aacttaaacc agacggggaa
    15481 cattggacgt ttacagctga agcaattaat atcgcgacaa ctttcctgaa atcagaagga
    15541 atcgagctaa cgcctgtgaa aatggtcatt gaaacagaat taatcgacca atctggcgca
    15601 aaatatggac tcggttccag tgcagcggct acagttgctg taatcaacgc gctaatgacg
    15661 aaattttatc cagaaatatc aatgcttaaa aaattcaaac ttgctgcact ttcgcattta
    15721 gtagtacaag gaaatggctc ttgtggcgac attgcttctt gtatgtatgg cggctggatt
    15781 gcgtatacaa cgtttgatca agaatgggtg aagcatcgtt tggcttataa atcactcgaa
    15841 tggtttatga aagagccgtg gccaatgctt caaatcgaaa cattggaaga accagtgccg
    15901 actttttctg tcggttggac gggcacacct gtaagtaccg gaaaactagt ttcgcaaatt
    15961 catgctttta aacaagaaga tagcaagaat taccaacatt ttttaactag aaataacgag
    16021 attatgaagc aaataattca agctttccat acgaaagatg aggaattgct ttattcatct
    16081 attaaagaaa atcgtcgcat tcttcaagaa cttggaacaa aagctggcgt aaatattgaa
    16141 acaagcttac taaaagaact agcggactca gctgaaaaca tgggtggcgc aggaaaatca
    16201 tctggctctg gtggcggaga ctgcggaata gctttctcga aaacgaaaga actagccgaa
    16261 aaactcgtta atgagtggga aaagcttggt attaagcatt tacctttcca tacagggaga
    16321 gttcaaatta ctgaataatg gggatatata ataaaagccg aacaactttt aagtaaaagt
    16381 tgttcggctt ttgttttaat catttaaaat aaagtaacaa actgaatctt ttattcagtc
    16441 gtattatctt ttttagataa attattcgcg t
//
LOCUS       DASDYO010000063        16376 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.063, whole genome shotgun sequence.
ACCESSION   DASDYO010000063 DASDYO010000000
VERSION     DASDYO010000063.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16376
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.063"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..93
                     /locus_tag="U0290_001692"
     CDS             <1..93
                     /locus_tag="U0290_001692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009927999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301736.1"
                     /translation="LNIMQSRVLSNRRREKGGEPPEYSCPLWGK"
     gene            520..1293
                     /locus_tag="U0290_001693"
     CDS             520..1293
                     /locus_tag="U0290_001693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isocitrate lyase/phosphoenolpyruvate mutase
                     family protein"
                     /protein_id="HEM2301737.1"
                     /translation="MTKNFKKLKSLHELPTPLILYNCWDVASARAIQQGGAPVIATSS
                     YAIAESLGAVDGEHLTFDEMFLVISRIAKNVSLPLTVDIETGYARNLEELAQNVERLL
                     AIGVCGVNLEDQLIGVTNPGLCSTEEQCDKIETIKETAAKMSTEIFINARTDVFFQGR
                     DETVDLLEEAIDRAKAYKEAGADAIFIPGLLLPKLIRAFVEKSPLPVNVMRMDGMLSN
                     EDLQKIGVKRISYGPFSFFQANLAIQLEVERIFEGGKAL"
     gene            1290..2342
                     /locus_tag="U0290_001694"
     CDS             1290..2342
                     /locus_tag="U0290_001694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463609.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional transcriptional activator/DNA
                     repair protein Ada"
                     /protein_id="HEM2301738.1"
                     /translation="MITNQRDIDKYYDMLVEKNSNYEGVFFVGVKTTGILCRPTCPAK
                     KPLKENCEFFSTAKEALLASYRPCKRCEPLSNPTKLSPAVKLLVDAIEKNPEKKWTDK
                     DFDELSISANTARRQFKKQFGMTFIEYARSRRLGLAFKHIRGGNSIINAQIESGYESG
                     NGFRDAFSKTMGEVPHKSNDITILYSAWLETKLGSMLAISDDDSLLLLEFVDRKGLET
                     EIKKLRVRLNAAITPEKTIIIQQIEAELAQYFNGALIDFKTPIRYIGSDFQQSVWNEL
                     RRIPIGETISYKSLAEKLGRPTASRAVARANGANQLSLIVPCHRVINTNGALGGYGGG
                     LARKEWLIKHEKMVPR"
     gene            complement(2364..3002)
                     /locus_tag="U0290_001695"
     CDS             complement(2364..3002)
                     /locus_tag="U0290_001695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pentapeptide repeat-containing protein"
                     /protein_id="HEM2301739.1"
                     /translation="MKKITAPRIPDGDLTVYPNDTYFIEDIGEVSEQIFRKTTLTGEI
                     FEHFHLETIIFDGCVFDSVSLVSANLTDVVFKNCDLSNLDLMGAIIHRVRFENCKLIG
                     VNFSDATLRNCVFVDCYADYVAFRYANLKWVAFEAGAYTNSDFSGAQLVDTYLERLDL
                     NKAQFLNCALNGVDLSSCIFESITAMPQDLKGVSIDFSHAPALMPLFGIRVK"
     gene            3133..4089
                     /locus_tag="U0290_001696"
     CDS             3133..4089
                     /locus_tag="U0290_001696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463611.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacid dehydrogenase family protein"
                     /protein_id="HEM2301740.1"
                     /translation="MTASVFVAGKLLPETMEALSEWDVKAFSGEENITEAELIKNVTE
                     VDAIICPLSSPISAKVLESAKNLKIVANIGAGFDNIDVKKAQELGIAVTNTPDVSTEA
                     TAELTLGLILDVARRISEGDRLCRETPEQFKGWAPTFFLGTELSGKTLGIIGLGRIGQ
                     AVAKRAAAFGMKIIYSGHHPKEAAKEWNAEFVSQEELLKRSDVVTIHAAYSPSLKYLL
                     NETTLKTMKSSAFLINAARGPVVEEAALIKALEAGVIAGAALDVFEFEPKIGEDLAKL
                     DNVVLTPHIGNATVETRTAMGKIAIANVEAVLAGKAPLHSVY"
     gene            4177..4249
                     /locus_tag="U0290_001697"
     tRNA            4177..4249
                     /locus_tag="U0290_001697"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4210..4212,aa:Lys,seq:ctt)
     gene            complement(4356..5558)
                     /locus_tag="U0290_001698"
     CDS             complement(4356..5558)
                     /locus_tag="U0290_001698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990188.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM2301741.1"
                     /translation="MVKKVKGRRYEGSIEQRSKNSWRMRVTVGYDYKGTPIRADRTTR
                     TKNERERERELRNFITELEQNGYTAPARMTFKAFVENEYMPKHAQNNLEVKTWTEYYK
                     SIVARAYPAFGGVQMDKITTLHIVNLVAKLQKPGARLDVKPTDSDEKKNKPLSPRSIR
                     NIYFAINSVFETAVEWKVIPINPAEGVRLPKTTKRPPTIYTPAEIELLNAALVKEPLR
                     LQVMIYIALISGCREAELAALEVKHVNLIEDELTFEQTLVAKAGEGLLLKESTKNDVA
                     GIVSIPAWLTNLIETYISNEVLDLKTEGKWTNHKFLFANMEGKPIRPDSIYQRWKRFL
                     ERHNLPVIRFHDLRHTSATLLLNKGRDIKIIQERLRHKSSVTTSNIYAHVLKDTHKDA
                     ASDFENPF"
     gene            complement(5624..6364)
                     /locus_tag="U0290_001699"
     CDS             complement(5624..6364)
                     /locus_tag="U0290_001699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301742.1"
                     /translation="MKKGMVLLTGFLLAFSIFLVGCGNEKNDIQVTNTNDKSNFKEKE
                     EAQMKLTETEITPNDKGDFSIMGVVDEGASVYIESEEAEVNSSGMFVASSNYTGSEEI
                     QYTVTAKEAGKTDNVQIVTILPPTLKEYSVGDTQEIGGIKVTLTSVEKTNERNQFDDT
                     KPKNVVKISYKVENNSGSEYFVDSDIDVYDSKGTMGERYPLDNTTGKIPNGKNMNADF
                     HAGVNESGNIEIIFNLFSDANLTFHAKI"
     gene            complement(6386..7108)
                     /locus_tag="U0290_001700"
     CDS             complement(6386..7108)
                     /locus_tag="U0290_001700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727738.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301743.1"
                     /translation="MSKYSYLLKKWWFWALAILFLVILFYSFWVIIYLVALASLIFGI
                     VKVVKNENRRKYTIILTISAIFLITFSLIRVVQMYNYVINNPEETTANEQKKNTVQDE
                     QTEKPAQEDAAEDEQAEEPAQDDVSTPSKITSDSIELFNESIDRLISDSSGVLIKVVP
                     FENEYDMLIAYVSQDLKYQDEATKQKNVDYLGSEIQQRALGTLFGGDNNLRPMVEFRY
                     KDETKMAGSSAFDKTNMKLKGK"
     gene            complement(7124..7342)
                     /locus_tag="U0290_001701"
     CDS             complement(7124..7342)
                     /locus_tag="U0290_001701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc-ribbon domain-containing protein"
                     /protein_id="HEM2301744.1"
                     /translation="MYCPKCGHALDNHENQCPNCLTPIIYQSNNNGKAQKAGEIMEES
                     GKLMSGCGCLMTLLITIPVIVILIIMFL"
     gene            complement(7365..7856)
                     /locus_tag="U0290_001702"
     CDS             complement(7365..7856)
                     /locus_tag="U0290_001702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301745.1"
                     /translation="MNKTSYELKQEFPELNFVINNNLPTKLFGLIQNKVVHLHPDLSE
                     NELRCTIIEEAMHWKYTAGDITKFNNVENIKQEKFARRKAHEYLVNIQSLALCYDLGY
                     RTYYEAATFLNVTEKFLIEAVENYREKYGLMYNNGNYIIHFGSTIQVFQEDNSFYPYD
                     YGC"
     gene            complement(7889..8194)
                     /locus_tag="U0290_001703"
     CDS             complement(7889..8194)
                     /locus_tag="U0290_001703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2301746.1"
                     /translation="MTIGKKISELRNKRGISQIQLAKDLNVSTSTIGMWETDKRAIKD
                     ELIVQLADYFNVTTDYLLGREKFDNSDLLAAHIDNDLTEEERIEIEKYLKFIRSQKE"
     gene            8320..8562
                     /locus_tag="U0290_001704"
     CDS             8320..8562
                     /locus_tag="U0290_001704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2301747.1"
                     /translation="MININNLKKIRIAKGITQLEAAEAIGISYSLLSKMEAGYRGSSD
                     KTKIKVANFYGKSVGEIFFNKEITNSDNKKLTKIGG"
     gene            8566..8850
                     /locus_tag="U0290_001705"
     CDS             8566..8850
                     /locus_tag="U0290_001705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301748.1"
                     /translation="MNIRYLSKKRSEEKDLIFKTKNILPENLKSLNIEMQGDRNCCYG
                     LLEINGKQLGKGITAVKLDLKAGSLPIVQVKYHPFTISEEMRRLLWSGKY"
     gene            8876..9157
                     /locus_tag="U0290_001706"
     CDS             8876..9157
                     /locus_tag="U0290_001706"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301749.1"
                     /translation="MNNIKQAIIKLETILENGNEKENRLFVKYNTIKNILDLLEKDQE
                     LKIIEMEVELNGVEDSIENAALLEKRLSEAKSLVEDLANTINSLEIKVK"
     gene            9189..9350
                     /locus_tag="U0290_001707"
     CDS             9189..9350
                     /locus_tag="U0290_001707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003735005.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301750.1"
                     /translation="MKDFEMMEAIKQKRLECKLVILENFESSFKEALNKGDSAMVSAL
                     AESLETVIK"
     gene            complement(9343..9585)
                     /locus_tag="U0290_001708"
     CDS             complement(9343..9585)
                     /locus_tag="U0290_001708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990193.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301751.1"
                     /translation="MKNRMDIMFKGISDDQPIALMGVISITSFPDNKSFDLNDFYLEA
                     DKTYKIIYKGANELENDLSKVFLMNSNDVLYIEFTI"
     gene            9649..10428
                     /locus_tag="U0290_001709"
     CDS             9649..10428
                     /locus_tag="U0290_001709"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HEM2301752.1"
                     /translation="MSNLQVIANDMLPVLENEKGEKFVNARELHQSLQVGKKFTTWIT
                     DKLSNYGFSKDEDYFPILGESTFGRPRTEYLLTLDTAKELAMVQNNEMGRAIRKYFIE
                     VEKQARKLATEYPTFSYMIDDPVARAKKWIEEQQEKQEALKQIDEQKPKVIFADAVQT
                     SENTVLVKDLATILKQNGLDIGQNRLFEWLRGSGYLLNKGAYYNKPSQKAMNLGLFEQ
                     KTHIHTDRNGLMITTYTPRVTGKGQIYLLNKLLEEHNQVII"
     gene            10550..11074
                     /locus_tag="U0290_001710"
     CDS             10550..11074
                     /locus_tag="U0290_001710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987420.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301753.1"
                     /translation="MFQKSTSAPTAMQVLAETRTQKELAIDSYVTPALISNQLKGKRT
                     VSLEQAEQLIDSYNEPESTYLFAHEFSNGMIPPLLDGLDSHHAALTCRFELEVTEAVN
                     ALKSGLETMTFNLRKGDMLQREAAKQAISEITDVIATALTLNTSIAKAFNINLQQILE
                     SRDKFYQKNGLVKE"
     gene            11081..11266
                     /locus_tag="U0290_001711"
     CDS             11081..11266
                     /locus_tag="U0290_001711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2301754.1"
                     /translation="METMEKDILTAEEAAEMLGMKKRTIQSWARNAGLPGKKINGKTW
                     IFSKRELEAWVAQGGEK"
     gene            11282..11470
                     /locus_tag="U0290_001712"
     CDS             11282..11470
                     /locus_tag="U0290_001712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301755.1"
                     /translation="MTERVFRKTTNFGDSEIHTNSRTKMIANPAFQQKIPLNETGCDN
                     MTDYIEELKLKGYEEVTR"
     gene            11703..12662
                     /locus_tag="U0290_001713"
     CDS             11703..12662
                     /locus_tag="U0290_001713"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987423.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqaJ viral recombinase family protein"
                     /protein_id="HEM2301756.1"
                     /translation="MAIAKEKTMNILASVKDMDRTQWLLTRRLGIGGSDAGIIMGLNQ
                     YKTAFELWLDKTDQVPPGEMAGEAAYWGTQMEEVVAKEFEKRTGKKVRRSNMMYQHPE
                     HDFMLANVDRFVVGEDAILECKTASAYLAKEWEADEVPATYLVQIQHYLAVTGKSKAY
                     VAVLIGGNKFIWKEVERDDELINQIIAFELDFWETNVKGHVAPALDGSSAAEKYLKDR
                     FAKSEAKQVNLSKEYNEFLAERANLGRDITLLETRKKEIDNNIKNELKEAETGITDDF
                     TITWKPVTTSRVDTKRLKEEHLDIYKKLQKESSYRKFAVKENE"
     gene            12662..13477
                     /locus_tag="U0290_001714"
     CDS             12662..13477
                     /locus_tag="U0290_001714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990196.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase RecT"
                     /protein_id="HEM2301757.1"
                     /translation="MATNDELKNQLANKQNGGQVASAQSLDLKGLLEAPTMRKKFEKV
                     LDKKAPQFLTSLLNLYNGDDYLQKTDPMTVVTSAMVAATLDLPIDKNLGYAWIVPYKG
                     RAQFQLGYKGYIQLALRTGQYKSINVIEVREGELLKWNRLTEEIELDLDNNTSEKVVG
                     YCGYFQLINGFEKTVYWTRKEIEAHKQKFSKSDFGWKKDYDAMAKKTVLRNMLSKWGI
                     LSIDMQTAVTEDEAEPRERKDVTDDESIPDIIDAPITPSDTLEAGSVVQGSMI"
     gene            13507..14433
                     /locus_tag="U0290_001715"
     CDS             13507..14433
                     /locus_tag="U0290_001715"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731812.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301758.1"
                     /translation="MDGYIALHRKIIDSWIWQDPEFYRLWSYCLIKASFKEREIFLGQ
                     QIVKLNPGQFVIGREKLEEAMNIGLKNKRTALTWWRRLQKLEKAQMLNIKSYNKFSIV
                     TIENWGLYQGSDIENEQQNEQQTNNKRTTDEQQTNTNNKDNKDNKEKNDNKDNNKRQN
                     KFDEVHLSLANLLFEMIKSNNPEEKVPDVEKWAHDIRIMIEQDKRDAEKVKNAIIWSQ
                     KNDFWCGVIKSPKSLRKNYDQMATQRNKPVANKPFNKYSKQTKPEILPDWFNKEQKQT
                     KQETSTTESSEDLEKKVAEIKAKLAARSEVQA"
     gene            14430..14597
                     /locus_tag="U0290_001716"
     CDS             14430..14597
                     /locus_tag="U0290_001716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301759.1"
                     /translation="MTEYALYKADELLIIGTVDKLAEFQKVKRETILFYATPTYQKRT
                     TDKGLRVIRVV"
     gene            14613..14894
                     /locus_tag="U0290_001717"
     CDS             14613..14894
                     /locus_tag="U0290_001717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014589141.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301760.1"
                     /translation="MGKYYWHVSRFGGKPTEIRHYNHITKMYKFILRNPAMFKDKTLT
                     IYDDAKAVTNMTFNEIKYRASLNLCETVERKYVLSLTQRLKEEQKEAKK"
     gene            14891..15703
                     /locus_tag="U0290_001718"
     CDS             14891..15703
                     /locus_tag="U0290_001718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEM2301761.1"
                     /translation="MKRILNYPGSKWGLADLIIENMPEHKSYLEPFCGSCAVFMNKQK
                     ATLETINDLDGRLVNLFKTMRDNPEELQYLIMHTLYSREEYMLSHEISSDSLEDARRM
                     AVRLWFAVGGKTNANVGFRKNVSWNGPYNAYEWNDMYNRIGIAAARLKDAQIENVDAI
                     KLIEQHNDKDTLIYCDPPYVATSLASSHYQHDFSLEQHKELLKVLKKHEGKVMLSGYE
                     SELYKQELSDWPALKTMTKVGITSEKKSDRQEIIWCNFEPPMQLNLFKEEQA"
     gene            15700..16332
                     /locus_tag="U0290_001719"
     CDS             15700..16332
                     /locus_tag="U0290_001719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1642 domain-containing protein"
                     /protein_id="HEM2301762.1"
                     /translation="MRFKEGDKVEFIWIGELKQGVVTEIEETKNAISYQIKYSGEMGM
                     TWLDERDLLSPAPVLKVPKLVGDFLENHSKEDGHTLHDLLCDLLTSRDSLDENVYDWI
                     MENNNENGELLARAWLDGYEVEKELLYYVKLPISKRNEATDELEVINMCLLLNIQSHE
                     TCISGNYRWVDKLKRTGWRTKLTEAQIKDMPEGDAYWQFAVPVRDLECEA"
BASE COUNT         5678 a         2750 c         3278 g         4670 t
ORIGIN      
        1 ttaaatatta tgcaaagtag ggttttatcg aatcgtcgaa gagagaaagg tggggaaccg
       61 ccagaatact cctgcccgct atgggggaag tgaaaattta gagtacaaaa gagtaaacag
      121 gattgtaatt gctaaactca ctagtgatat tgaaaataga tttattaaat tattgtcatt
      181 caaataaact tttacggaaa actgggattg gtaaggatgg ttgtagatag tgctgctttt
      241 tattaataat tatagagaaa aagaaactaa agtagcatta aaaaccaata aaaagacaag
      301 tgacaaaatt ctacaacaaa tttcaaagag agaatgaaat taactatata cgggaacaag
      361 tagcttaaga tgaggaagag aattttaggc tacttagcgt atgcaagagt ttacagttct
      421 acatacatct accaaaaaac atccatgtta attttcctgg tacctccaat ctccccacct
      481 gctatactaa ctccatccta acaaatggag ttgaaaccaa tgacaaaaaa ctttaaaaaa
      541 ctaaaatccc tacacgaact acccacccca ctaatcctct acaactgctg ggacgtcgct
      601 tctgccagag caatccaaca aggcggagca ccagtaatag cgacaagcag ttatgcaatt
      661 gcagagtcac tcggcgctgt ggatggggag catttaactt ttgacgaaat gtttttagtt
      721 atttcgcgca ttgccaagaa tgtgagtttg ccgctaacgg tggatataga gactgggtat
      781 gctagaaatt tagaggaact ggctcagaat gtggagcggt tgctagcgat tggtgtttgt
      841 ggtgtgaact tggaagatca gcttattggc gttacaaatc cggggttatg cagtactgag
      901 gagcaatgtg ataaaatcga gacaatcaaa gaaacggcgg cgaaaatgag cacggaaatt
      961 tttatcaatg cgcgtacaga tgtctttttc caagggcggg atgagacggt agacttgttg
     1021 gaagaagcga ttgacagggc aaaggcatac aaggaggctg gggcagatgc tatttttatt
     1081 ccgggtctgc tattaccaaa attaattcgc gcatttgtgg agaaatcacc gcttccggtc
     1141 aacgtcatga ggatggatgg gatgctctca aacgaggact tacaaaaaat cggtgtgaaa
     1201 agaattagtt atgggccgtt tagttttttt caggctaatt tagcgattca gctggaagtt
     1261 gagcggattt tcgaaggagg gaaagccttg tgataacgaa tcagcgggat attgataaat
     1321 attatgatat gttagtggag aaaaattcga attatgaagg cgtatttttt gttggagtga
     1381 aaacgacggg aatactttgt cgcccaacgt gtccggcgaa gaaaccttta aaagagaatt
     1441 gtgagttttt cagtacagcc aaggaggcgc tacttgcatc ttaccggcct tgcaagcgtt
     1501 gtgaaccact ctccaatccg acgaaattgt cgccagctgt gaagttgctt gttgatgcaa
     1561 ttgagaaaaa tccagagaaa aaatggacgg ataaagattt tgatgaatta tccattagcg
     1621 caaatacagc gcggcgccag tttaagaagc agtttgggat gacttttatt gagtatgcgc
     1681 gttcgcggcg tctcggtctt gcttttaagc atattcgggg tggaaattcg atcattaatg
     1741 cacaaattga aagtggttat gagtctggaa atgggttccg agatgctttt tcaaaaacga
     1801 tgggggaggt tcctcataaa tcaaacgata tcaccatttt gtattccgct tggcttgaaa
     1861 ctaaacttgg atcaatgctc gcaatttctg atgatgatag tctattgctt ctggaatttg
     1921 ttgatcgaaa aggattggaa acagaaatta aaaaattacg agtgcgctta aacgcggcta
     1981 ttacacctga aaaaacaata ataattcaac aaatagaagc cgaattagcg caatatttta
     2041 atggagcatt gattgatttt aaaacaccga ttcgctatat cgggtcagat tttcaacaga
     2101 gtgtctggaa tgaactgcga cgaattccga taggcgaaac aatttcgtac aaaagtttgg
     2161 cagaaaaact agggcggcca acagcaagtc gagctgtggc aagagcaaat ggggctaacc
     2221 aattatccct catcgtcccg tgccatcgtg taatcaatac taacggagca ttaggaggct
     2281 acggtggcgg tcttgcgcgc aaagaatggc taattaaaca tgaaaagatg gttccaaggt
     2341 aacgcggaac catctttttt caattattta acccgtatcc caaacaacgg catcaaagca
     2401 ggagcatgcg aaaaatcaat gctcacgccc ttcaaatctt gcggcattgc agtgatagac
     2461 tcaaaaatac atgagctaag atcaacacca tttagcgcgc aatttaaaaa ctgcgcttta
     2521 ttcaaatcaa gccgttccaa ataggtatcg accagttgag ccccgctaaa atcactattc
     2581 gtatacgcgc ccgcctcaaa cgccacccat ttcaagttag cataacgaaa ggcaacataa
     2641 tccgcataac aatcaacgaa aacgcaattt ctaagcgtag catcactaaa attcacgcca
     2701 attaatttac aattttcaaa acgaactcgg tgaataattg cgcccattaa atctaaattc
     2761 gataaatcgc aatttttaaa tacaacatca gtcaaattcg cacttacaag agaaaccgaa
     2821 tcaaaaacac aaccatcaaa aataatcgtt tctaaatgaa aatgctcgaa aatttcccca
     2881 gttagcgttg tttttctaaa gatttgctca ctaacttctc caatatcttc aataaaatat
     2941 gtatcattcg gataaaccgt caaatcccca tcaggaatcc gcggcgcagt aatttttttc
     3001 attatatcga cctcacttcc gctttcatta taccgtattt tgctaggaaa aggagcggaa
     3061 aatcgtttac ctttcataaa aaacggatta caatgaatgt agaataaaaa tggcagttga
     3121 ggagtgaacg tgatgacagc gagcgtattt gtggcaggaa aattactacc agaaacgatg
     3181 gaagctctta gtgaatggga cgttaaagct ttttcaggtg aggaaaatat tacagaagca
     3241 gagttaataa aaaatgtaac ggaagtggat gcgattattt gcccgctttc ttccccaatt
     3301 tcggcaaaag tattggaatc ggcaaaaaat cttaaaatcg tggcgaatat tggtgccggt
     3361 tttgacaata tcgatgtaaa aaaagcgcaa gaattgggca ttgcagtgac caatacgcca
     3421 gatgtgtcaa cggaagcaac ggcggaacta acgcttggat tgattttgga cgtagcacgg
     3481 agaatttcag aaggcgaccg attatgccgc gaaacacccg agcaattcaa aggctgggca
     3541 ccaacgttct ttttaggtac tgaattaagt ggcaaaacgc tcggaattat tggattagga
     3601 agaatcggac aagctgttgc aaaacgtgcg gctgcttttg gaatgaaaat tatttattct
     3661 gggcaccatc cgaaagaagc agcgaaagag tggaatgcag agtttgtgag tcaggaagaa
     3721 ttattgaagc gcagcgatgt tgtaacaatc catgcggcat acagtcccag cttgaagtat
     3781 ctgttgaacg aaacaacact gaaaacgatg aaatcaagtg cctttttgat caatgctgct
     3841 cgcggtcctg ttgtagagga agctgcactg attaaggcat tagaagcagg cgttatcgcc
     3901 ggcgctgcgc tggatgtgtt tgagttcgag cctaagattg gcgaggattt ggctaaactg
     3961 gataatgtcg tattaacacc ccatatcgga aacgcaactg tggaaacacg cacagcaatg
     4021 ggcaaaatag ccattgcaaa tgttgaagct gtcttagcag gaaaagcacc actacattct
     4081 gtttattaat accgaaaaat atagccgcag cgagtggctg cggctgtgtt ttatcgctga
     4141 attatggtat aatatttttt gtcggaatac gacaacgggt tgttagctca gttggtagag
     4201 cagctgactc ttaatcagcg ggtcgggggt tcgaaaccct cacaacccat atataaaaac
     4261 cgcctaaaca aagcgtttaa gcggtttttt gtttgtgaaa ttttagttta aaattgcctt
     4321 tttttattaa gtggggcaga ggtggggcag aaagcttaaa aagggttctc aaaatcgcta
     4381 gctgcatctt tgtgcgtatc tttcaaaaca tgtgcataaa tgtttgaagt ggtcacacta
     4441 gatttatgtc taagccgctc ttggataatt tttatatctc tacctttgtt caataaaagt
     4501 gtagcagatg tgtgacgcaa atcatgaaaa cgaatcaccg gcaagttgtg tctttctaaa
     4561 aatcgtttcc aacgctgata aatcgaatca ggcctaatcg gtttgccttc catgttggcg
     4621 aataaaaatt tgtgattggt ccatttccct tcagttttta ggtctaaaac ttcattgctt
     4681 atatatgttt ctattaaatt agttaaccaa gcgggtatag aaactatccc agctacatca
     4741 ttcttagttg attctttaag aagtaaacct tctcctgctt ttgcaactag cgtttgttcg
     4801 aatgttagct catcttctat taagttcacg tgttttactt ctaatgctgc taattcagct
     4861 tctctacaac ctgaaatcag cgctatataa atcattactt gcaatctaag tggctctttc
     4921 actagagctg catttaacaa ttcaatttca gcaggagtat aaatagtagg cggtctttta
     4981 gttgtttttg gaagccttac accctctgcg gggttaattg ggattacttt ccactcaacc
     5041 gcagtttcaa atactgaatt tatcgcaaaa taaatatttc tgatagatcg tggcgaaagt
     5101 ggcttatttt tcttttcgtc tgaatctgta ggtttaacat ctaatcttgc gccgggcttt
     5161 tgtaattttg cgactaaatt aactatatga agtgtagtta ttttatccat ttgaacgccg
     5221 ccaaaggctg ggtaagctct tgctactata gatttgtagt attctgtcca ggttttaact
     5281 tctaggttat tttgtgcatg ttttggcata tactcattct caacaaatgc tttaaatgtc
     5341 attcttgcag gagctgtata tccattttgc tctaattctg tgatgaaatt tcttaactct
     5401 ctttctcgct ccctctcatt ttttgttcgc gtcgttctgt cagcccgaat cggcgtacct
     5461 ttgtagtcat agcctacagt cacgcgcata cgccatgaat ttttgctacg ttgttcaata
     5521 gaaccctcat aacgcctacc ttttactttt tttaccataa ataagtcctc ctttcgcaca
     5581 tacgttcttt tttcggtaaa aagaaaagcc cagaggctct cttttaaatt tttgcatgga
     5641 acgttaaatt tgcatcagaa aataagttga agattatttc aatatttcca ctttcattaa
     5701 ctcccgcatg gaagtctgcg ttcatatttt ttccgtttgg tattttcccg gttgtgttat
     5761 ccaatgggta tctttcgccc attgtacctt tagaatcgta tacatcaatg tcagaatcga
     5821 caaagtactc agagccagaa ttattttcaa ctttataact tattttaact acattcttag
     5881 gcttggtatc atcaaattga tttctttcgt tcgttttctc aacactagtt aaagttactt
     5941 ttatcccgcc gatttcttgt gtatcaccaa cgctgtattc tttcagagtg ggtggaagta
     6001 tagttacaat ttgtacatta tcagtttttc cagcttcttt agctgtaaca gtatattgaa
     6061 tttcttccga gccggtgtag ttgctagaag caacgaacat ccccgatgaa ttaacttctg
     6121 cttcttctga ctcaatataa acagatgcac cttcatcgac aacgcccatt atgctaaagt
     6181 cgcctttatc atttggtgta atttctgttt ctgttaactt catttgagct tcttcttttt
     6241 ctttgaaatt acttttatca ttggtatttg taacttgtat atcatttttt tcatttccac
     6301 aacctactaa aaaaatacta aaagctaata aaaaccccgt taataaaacc atcccttttt
     6361 tcatcttatc tgctcccttt atattttatt ttcctttgag cttcatatta gttttatcaa
     6421 aagcactact tccagccatc tttgtctcat ctttatatct gaactcaacc attggtctta
     6481 gattgttatc tccaccaaag agcgtaccta gagcacgttg ctgtatttcg cttcctaaat
     6541 aatcaacatt tttttgttta gttgcttcat cttgatattt taaatcttga gatacgtacg
     6601 caattaacat atcatattca ttttcaaatg gaaccacttt tattagtacc ccgctcgaat
     6661 cagaaatcaa gcgatcaatt gactcattaa ataactctat actatctgat gtaattttag
     6721 agggtgtaga tacatcatct tgagcaggtt cttctgcttg ctcgtcctcg gcagcgtctt
     6781 cttgagcggg tttttccgtt tgctcatctt ggacagtatt ctttttttgc tcatttgctg
     6841 tagtttcttc tggattatta ataacatagt tatacatctg tacaactctt attagtgaaa
     6901 aggtgattag aaatatagcg gatatagtca atattattgt gtattttcgt ctgttttcat
     6961 ttttaacaac ttttactatc ccgaatatta aggaagctag tgccaccaag tatattatta
     7021 cccaaaagct gtaaaataaa ataactaaaa ataatatagc aagagcccaa aaccaccatt
     7081 tttttaacaa gtaactatac ttactcatcc cgttatctcc tttttataaa aacataatta
     7141 ttaaaattac tatgacagga atagttatca acaatgtcat taaacaacca catcctgaca
     7201 ttaatttacc agattcttcc ataatttcgc cggctttttg tgcttttccg ttgttgttgc
     7261 tttgataaat gattggtgtt agacagttag gacattgatt ttcgtgattg tctagtgcat
     7321 gtccgcattt agggcaatac atatgttcac ctcgtcaaaa tttattagca cccataatca
     7381 taaggataaa aagagttatc ctcctggaaa acttgaatgg tagagccaaa atgtataata
     7441 taattaccat tattatacat tagtccatat ttttctctat aattctctac tgcttcaatc
     7501 aaaaattttt cagtaacatt taaaaaagta gcagcttcat aatatgttct gtagccaaga
     7561 tcgtagcata aagcgagtga ttgtatattt actaaatatt catgcgcttt acgacgcgca
     7621 aatttctcct gcttgatatt ttctacatta ttaaattttg ttatatctcc agcggtatat
     7681 ttccagtgca ttgcttcttc tattatagta catctaagtt cattttctga caaatcagga
     7741 tgaagatgta ctactttatt ctgtataagt ccgaaaagtt ttgttggtaa gttgttattt
     7801 ataacaaaat tcaattctgg aaactcttgc tttaattcat aacttgtttt attcatcaat
     7861 tagcccccta atgttaattt ttaggcaact actctttttg tgatctgata aattttaaat
     7921 atttttctat ctctattcgt tcttcttccg tcaaatcatt gtcaatatgc gcagctagta
     7981 agtcgctgtt gtcgaatttt tcacgaccta ataaataatc agttgttaca ttaaagtaat
     8041 cggctaactg aacgattaat tcatctttta tagcacgttt gtctgtttcc cacattccta
     8101 tagtacttgt tgaaacattt aaatcttttg caagttgaat ttgagagata cctcttttat
     8161 ttctcaactc agatattttt ttgcctatag tcataatatc tccctccttc ttaagtatca
     8221 ctataagtga tattttaaaa aaaataaaca aaaatcacaa aaagtgattg acaatcacgt
     8281 aaagtgatag tattattatc acatagagtg ataaaggcgg tgattaatat taataatctc
     8341 aaaaaaattc gcattgctaa aggtattaca caattagaag cagctgaggc tatcggtatt
     8401 tcttatagtt tactttctaa aatggaagca ggttatcgag gtagttcaga taaaacaaag
     8461 attaaagtag caaattttta cggaaaaagc gttggagaaa ttttttttaa taaagaaatc
     8521 actaatagtg ataataaaaa actaacaaaa ataggagggt agaaaatgaa cataagatat
     8581 ttgagtaaga aaagaagtga agaaaaagat ttgattttta aaaccaaaaa catactacca
     8641 gaaaacttga aatcgttaaa tattgagatg caaggagata gaaattgttg ttatggacta
     8701 ttagaaatta atggaaagca attaggaaaa ggaattacag cagtgaagtt agatttaaaa
     8761 gcaggatcgt tgccaattgt gcaagtcaaa tatcatccat tcacaatcag cgaagaaatg
     8821 cgaagactgt tatggtctgg aaaatactaa aaaccataat ttaggaggaa gaaaaatgaa
     8881 taacatcaaa caagcaatta ttaaattaga aacaatttta gaaaatggta atgaaaaaga
     8941 gaatagatta ttcgttaagt acaacactat aaaaaacatt ttagatttac ttgaaaaaga
     9001 tcaagagcta aaaattatcg aaatggaagt agagctgaat ggagtagagg attccataga
     9061 aaacgccgct ttgttagaaa agagattaag tgaagctaaa tctttggtgg aagacttggc
     9121 taacactata aactcgttag aaattaaggt gaagtgaagc ttttccaaaa agaataggag
     9181 gttaaaaaat gaaggacttt gaaatgatgg aagcaattaa acaaaaacgg cttgaatgta
     9241 aattagtaat tttggaaaat tttgaatcga gttttaaaga agccctcaat aagggagatt
     9301 ccgccatggt gtcggcttta gcggaatcat tggaaacagt tattaaatag tgaactcaat
     9361 gtaaaggaca tcatttgagt tcattagaaa aactttcgat aaatcgtttt ctaactcgtt
     9421 tgcaccctta taaatgattt tgtaagtttt atcggcttct aaataaaaat catttaaatc
     9481 aaaacttttg ttatctggaa aagatgtaat gcttataacg cccattagag caatgggctg
     9541 gtcatcagag atacctttga acattatatc catgcgattt ttcacaaatt ccacctccct
     9601 tcacaaaaac tatagcactg tgaaagggcg aacagaaagg agaacaaaat gtcaaattta
     9661 caagtaattg caaatgatat gttgccagtt ttagaaaatg aaaaaggcga gaaatttgta
     9721 aatgcacggg aactacatca aagcttgcaa gttggaaaaa aattcactac ttggattact
     9781 gacaagctta gtaattatgg attttcaaag gatgaagact atttcccaat tttgggagaa
     9841 agtacattcg gtagacccag aacagaatac ttattaactt tagacactgc taaagaatta
     9901 gcaatggtac aaaacaatga aatgggtcga gcaattagaa aatactttat tgaagtagaa
     9961 aaacaagcga ggaaattagc aactgaatat ccaacatttt catacatgat agacgaccca
    10021 gtcgctaggg ctaaaaaatg gattgaggag caacaagaga agcaagaagc attaaagcaa
    10081 attgatgaac aaaaaccgaa agtgattttt gcagatgctg tacaaacgag cgagaataca
    10141 gttttagtaa aagacttagc gacaatcctt aaacaaaatg gcttagatat tgggcaaaac
    10201 aggctttttg aatggctaag aggaagcgga tatttgctaa ataaaggggc ttattataat
    10261 aaaccatcgc aaaaggcgat gaatttagga ttgtttgaac aaaaaacaca tattcataca
    10321 gatagaaacg gcttaatgat aactacctat acacctcgag ttactggcaa aggtcaaata
    10381 tacctattaa acaaattatt agaagaacac aatcaagtca taatttaagc gtcgcctacc
    10441 acaacgacgc ttatgcagac aacttagtca cggggagcga ctaacaatag tatataacga
    10501 taagttgtta attagtggtt aaaaaataaa caaaaaggat tgagatatta tgtttcaaaa
    10561 atcaacatca gcgccaaccg cgatgcaagt tttagcagaa actcgcacgc aaaaagagct
    10621 agcgattgat agttatgtaa caccagcact aataagcaac cagttaaaag gaaagcgaac
    10681 agtttcactt gaacaagcag aacagttaat tgatagctac aacgaaccag aaagcacata
    10741 tttattcgca catgaatttt caaacggaat gataccgcct ctactggacg ggctagacag
    10801 tcaccatgcg gctttaactt gtcgctttga actagaagta acagaagcag taaatgcgtt
    10861 aaaaagcgga ttagaaacga tgacattcaa tttaagaaaa ggcgacatgc tacaacgaga
    10921 agccgcaaaa caagcaattt cagaaataac agatgtaatc gcaacagcat taacgcttaa
    10981 cacaagtata gcgaaggcat tcaacattaa tttacaacaa attttagaaa gtcgagataa
    11041 attctatcaa aaaaatggtt tggtgaagga gtgagaaaca atggaaacaa tggaaaagga
    11101 tattttgaca gctgaggaag cggcggaaat gttaggaatg aaaaagagga ctattcaatc
    11161 ttgggctaga aatgcgggat tacccggcaa aaaaataaac ggcaagacat ggatttttag
    11221 caaaagagaa cttgaagcgt gggtagcgca aggtggagaa aaataaagga gggctacaac
    11281 aatgacagaa agagttttca gaaagactac aaacttcggt gatagcgaaa ttcatacaaa
    11341 tagcagaaca aaaatgattg ctaatccggc atttcagcag aaaatcccgt taaacgaaac
    11401 aggttgcgac aacatgacgg actatatcga agagttgaag ttaaaaggct atgaggaggt
    11461 cacgcgctga tggatgtatt tatggtaatg attttcgtgt cgtttatgtc tgtaatcgca
    11521 ggtttttggc tgagaggaag tgataaacgt ggttgagaat ccgatggttg ttgatgatct
    11581 ttgggacgat ggttttagac attaaaaaag cacgcatagc agtgcgcgct ttaaggattt
    11641 gagatattac cttaagaaaa ttatacctca aattcacata ttaatcaatg gaggtagcat
    11701 atatggctat tgcaaaagaa aagacaatga acattttagc aagcgtgaaa gacatggata
    11761 gaacacaatg gttgctgact cggcgcttag gtatcggcgg aagcgatgcg ggaatcatca
    11821 tgggtttaaa tcaatacaaa acagctttcg agttgtggtt agacaagacc gaccaggttc
    11881 cgcccggtga aatggcagga gaagcagcat actggggaac tcaaatggaa gaagttgtcg
    11941 caaaagaatt cgaaaagcga actggcaaga aagtaagacg tagcaacatg atgtatcaac
    12001 atccagagca tgattttatg ttggcgaacg ttgataggtt tgtggttggt gaagacgcta
    12061 ttttggaatg taaaacagca tcggcatacc tagcaaaaga atgggaagct gacgaagtac
    12121 cagcgactta cctagtgcaa atacaacact atttagcggt cacaggcaaa agtaaagcgt
    12181 atgtagcagt tctaatcgga ggaaataaat tcatttggaa agaagtagaa cgcgatgacg
    12241 agttaatcaa tcaaataatc gcttttgagt tagatttttg ggaaacgaac gtaaaaggac
    12301 atgtggcacc tgcgttggat ggttcaagcg ccgcagaaaa atatttaaaa gatcgttttg
    12361 ctaagtcaga agctaaacaa gttaatttat caaaagaata caatgaattt ttggctgaaa
    12421 gagcaaattt aggacgcgat ataacgctct tagaaacacg aaaaaaagaa attgataata
    12481 atatcaagaa tgagttaaaa gaagctgaaa cgggcatcac agatgatttt acgattactt
    12541 ggaagcctgt tacaacttca agagtagata caaaacgttt aaaagaagaa catctagata
    12601 tttataaaaa attacagaaa gaaagtagct atagaaaatt tgcagtgaag gagaatgaat
    12661 aatggcaact aacgatgaat taaaaaatca attagcaaat aaacaaaatg gagggcaagt
    12721 agcaagcgca cagtcattag acttaaaagg tttgctagaa gcaccgacaa tgcgcaagaa
    12781 attcgaaaag gtactagata aaaaagcgcc tcaattttta acttcccttt taaatcttta
    12841 taatggcgac gactatttac aaaaaactga cccgatgaca gttgttactt ccgccatggt
    12901 tgctgcaaca ctagatttac caatcgacaa aaatttaggt tatgcgtgga ttgttcctta
    12961 taaaggcaga gcacagtttc aacttggtta taaaggatac atccagttag cactacgcac
    13021 aggacaatat aaaagcatta atgttatcga agtgcgcgaa ggtgagctac tgaaatggaa
    13081 ccgacttacc gaagaaatcg aactagattt agacaacaat acaagtgaaa aagtcgttgg
    13141 ttactgtggc tatttccagt taattaatgg ctttgaaaaa acggtctatt ggactcgtaa
    13201 agaaatagaa gcgcataaac agaaatttag taaatcggat tttggatgga aaaaagatta
    13261 cgatgcaatg gctaaaaaga ctgttcttag aaacatgtta agcaagtggg ggattttatc
    13321 catcgacatg caaacagcgg ttacagagga cgaagcagag cctagagaac gaaaagacgt
    13381 tacagacgat gagtcgatac ccgatattat agatgcgcct ataacgccgt ctgacacgtt
    13441 agaagctggc tcggtagttc aagggtcaat gatctaagtg aaaattgata aggcagggga
    13501 attgcgatgg atggttatat agctttacac agaaaaatta ttgatagctg gatatggcaa
    13561 gaccctgagt tttatcggct ttggtcatac tgccttatca aagcgtcatt taaagaaaga
    13621 gaaatatttt taggtcaaca aatagtcaaa ttaaatccgg gtcaatttgt aatcggaaga
    13681 gaaaaattag aagaggcaat gaacatagga ctcaaaaata aacgaacagc acttacgtgg
    13741 tggcgacgat tacagaagct agaaaaagcc caaatgttga acatcaaatc gtacaacaaa
    13801 ttttctattg taactattga aaactggggg ttatatcaag gtagcgatat agaaaacgaa
    13861 cagcaaaatg aacaacagac gaacaacaaa cgaacaacag acgaacaaca gacgaacaca
    13921 aacaataaag ataataaaga taataaagag aagaatgata ataaagataa taataaacgt
    13981 caaaacaagt ttgacgaggt tcatttatct ttagctaatt tattatttga aatgattaag
    14041 tcaaataacc cagaagaaaa agttccagat gttgaaaaat gggctcatga catcagaatt
    14101 atgattgaac aagataagcg agatgctgaa aaagttaaaa acgctattat atggtcacag
    14161 aaaaatgatt tctggtgcgg tgtcataaaa tctccgaaat ctttaaggaa aaattatgat
    14221 cagatggcga cgcaacgtaa taagccagtt gctaacaagc cgttcaacaa atacagcaaa
    14281 caaacgaaac cagaaatatt gccagattgg ttcaacaaag agcagaaaca aacaaaacaa
    14341 gaaacttcaa caacagaatc aagcgaagac ttagaaaaga aagtcgctga aattaaagcg
    14401 aaattagcgg ctagaagcga ggtgcaggcg tgacagaata cgcactttat aaagcagacg
    14461 aactactaat aatcggcaca gtagacaaac tagcggagtt tcagaaagtg aagcgtgaga
    14521 cgattttgtt ttatgctacg cctacgtatc aaaagaggac gactgataag gggttaagag
    14581 taattagagt ggtttagaaa ggatgaaatt tcttgggaaa atattactgg cacgtgtcaa
    14641 gatttggtgg aaagccgaca gaaattcgac actataacca cattacaaaa atgtataaat
    14701 ttattttgcg aaatccggca atgttcaaag ataaaacttt aacgatttat gatgacgcaa
    14761 aagcagttac aaacatgacg tttaacgaaa ttaagtatag agctagtttg aatttatgtg
    14821 aaacggtaga aagaaagtat gtgttgtcac ttactcaaag gcttaaggag gaacagaagg
    14881 aggctaaaaa gtgaaacgaa tacttaatta tcccggcagt aaatggggtt tggcagattt
    14941 aataattgaa aatatgccgg agcataaaag ttatttagaa ccattctgcg gatcatgtgc
    15001 ggtctttatg aacaagcaaa aagctacttt agagacgata aacgatttag acggtcgact
    15061 agttaatctt tttaaaacaa tgcgtgataa tccagaagaa ctgcagtatt taatcatgca
    15121 cacgctgtat tctcgtgaag agtatatgct ttcgcatgaa atatcaagtg attcattaga
    15181 agacgctaga cgcatggctg tgaggctctg gtttgccgtc ggaggcaaga ctaatgcaaa
    15241 tgttggattt agaaaaaacg tgtcttggaa tggtccttac aatgcatatg agtggaatga
    15301 catgtataac cgaatcggaa tagctgcagc aagactgaaa gacgctcaaa tcgaaaatgt
    15361 agatgcaatt aaactgattg aacagcataa cgataaagat acactgatat attgtgaccc
    15421 gccatatgtt gcaacttctt tagcaagttc acattatcag catgacttta gtttagagca
    15481 acacaaagag ttactaaaag tgcttaaaaa gcatgagggc aaagtaatgt taagcggcta
    15541 tgaatcagaa ctatataaac aagagttatc agactggcca gctcttaaaa caatgacaaa
    15601 agtaggcatt acatcagaaa agaaatcaga taggcaagaa attatttggt gcaattttga
    15661 gccgcctatg caattaaatc tttttaagga ggaacaagca tgagatttaa agaaggcgat
    15721 aaagtagagt ttatttggat aggtgaattg aaacaaggtg ttgtaactga aatagaagaa
    15781 actaaaaatg ctatatccta tcaaattaaa tatagtggag aaatgggcat gacttggctt
    15841 gatgaaaggg acttactttc tccggctcca gttttaaaag ttccgaaatt agtaggtgat
    15901 tttttggaaa atcattctaa agaagatggt catacacttc atgatttatt gtgcgattta
    15961 ttaacttcta gagattcgtt agatgaaaat gtctacgact ggatcatgga aaacaataat
    16021 gaaaatggtg aattgcttgc acgcgcttgg cttgacggct acgaagtcga gaaagaactg
    16081 ctttattatg tgaagttacc gatttcaaag cggaatgaag ctacagacga attagaagta
    16141 attaacatgt gtcttttgtt aaatatacaa tcacacgaaa catgtatttc tggaaattac
    16201 agatgggttg ataagctaaa aagaacgggt tggagaacca aattgacaga agctcaaata
    16261 aaagatatgc ccgaaggtga cgcttattgg cagtttgctg ttcctgttag ggatttggag
    16321 tgtgaagcat gagagagatt gagtttagag gtaaacgaat agataacgga gaatgg
//
LOCUS       DASDYO010000064        16311 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.064, whole genome shotgun sequence.
ACCESSION   DASDYO010000064 DASDYO010000000
VERSION     DASDYO010000064.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16311)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16311)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16311
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.064"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            158..394
                     /locus_tag="U0290_001720"
     CDS             158..394
                     /locus_tag="U0290_001720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015084540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301763.1"
                     /translation="MPDWDFNNPESMKAWDLASGSYAEQVSGEVRAVVGSDLRKGNIW
                     ENVELPRLKNNPNVTKITTIDPKTGLEKIIFERK"
     gene            400..633
                     /locus_tag="U0290_001721"
     CDS             400..633
                     /locus_tag="U0290_001721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003732237.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301764.1"
                     /translation="MKITGNSSQVKFDLENGYVVKADGEMLVGGEFVVFKDSMKNWEP
                     PYENKKLSESEVQEIIQQVKQSTNENTVQISFE"
     gene            721..1068
                     /locus_tag="U0290_001722"
     CDS             721..1068
                     /locus_tag="U0290_001722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase (quinone)"
                     /protein_id="HEM2301765.1"
                     /translation="MDNFYKGFEGYPEIDFYTYINGEKTGIEMWEGYFDSIMNELSPV
                     DGRWVSLAYYYHLYEGWYDESPWVIPDNKKALEQFETIDVKILDNVTQEVMMKLIKLL
                     KDNLDSEIFIEYS"
     gene            1217..2011
                     /locus_tag="U0290_001723"
                     /pseudo
     CDS             1217..2011
                     /locus_tag="U0290_001723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917489.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
     gene            2017..2373
                     /locus_tag="U0290_001724"
     CDS             2017..2373
                     /locus_tag="U0290_001724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301766.1"
                     /translation="MINSRFYEGFEGEAEISFVAGDNKLVIWNGYFETILDNLLDCNV
                     EREGVLKEFFNHEGWYDDSPWMIEDNSLTITQLKCFDISKINQTSMKDDLEEVVKTII
                     SFFENNRFSKIYIEYE"
     gene            complement(2651..4306)
                     /locus_tag="U0290_001725"
     CDS             complement(2651..4306)
                     /locus_tag="U0290_001725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2301767.1"
                     /translation="MHFLKKTLPIFAILTVLLLTACGNDNEKSTTKTSPDKIKFLETS
                     ELLTLNTTAEEDFASFTAQNQVFEGLYTLDQKDNFVPGVADGMPEISADQTKYTIKLK
                     KNAKWSDGSQVTADDFVYAWRRAVDPKTAPGYSALFKDSIKNATEINEGKLPVTDLGV
                     VATDPTTLEITLKKPVPYFISLLSFETFFPQKESFVKKQGDKYGTDSAHTLYNGPFVM
                     KDWGGNITNKWTYAKNDQYWDKDNVKVNEIDVQVAKDINAGVNLYNTNEADRVPLSGD
                     FAKQYKDKKDFQTEKDALISYLRMNQKRDGKATPLANNSLRHALNLAVDKKQLTDRIL
                     GDGSFPANGLLPKDFVQNPTTGADFRTDSGDHLVYNKEEALKYWKQAQKELGTDKVTI
                     ELLGDDQETTKTIFAYLKAQFEDNLPGVTIKVKNMPSKSATQLTSDGNYDLSLAAWMP
                     DFKDPWTYSSLFLSDYFNNHMSYNSPAYDKLVKSTDTTLATKPEERWNAFVASEKVLL
                     DDDAAILPLYQHQTAVLQRTDITGVQKHAFGSPYSYKFIRVEK"
     gene            4529..5470
                     /locus_tag="U0290_001726"
     CDS             4529..5470
                     /locus_tag="U0290_001726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc ABC transporter substrate-binding protein"
                     /protein_id="HEM2301768.1"
                     /translation="MKKWSFLVVTVLAFVLVLAGCGASNNKVSGDKDKLKVVTTFYPM
                     YDFTKNVAGDNASIEMLIDAGTEPHDYEPSAKDIAKIEAADVFVYNSEDMETWVPSVL
                     KSLDSKKLTVIYASKGIELVEGTEEEDHDHEHEEGHHHEHDPHVWLSPVLAEQEVTNI
                     QNGLTKADKTNADTYKKNAETYKEKLKTLDNKFKTAFEGAKQRDFVTQHAAFQYLAKE
                     YDLHQVAIAGLSPDQEPSPARLAELQKYVKENNISTIYFEEVASPKVAETLANETGAK
                     LEVLSPIEGITDKEQKKGMDYIAYMEQNLQALQKTIK"
     gene            5483..6187
                     /locus_tag="U0290_001727"
     CDS             5483..6187
                     /locus_tag="U0290_001727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter ATP-binding protein"
                     /protein_id="HEM2301769.1"
                     /translation="MKYIDIANIGFKYESEPVLENISFQVSAGEFIILTGENGAAKST
                     LLRIILGILQPDKGSVTFAKKNADGGRLLTGYVPQQIASFNAGFPSTVLELVRSGRFP
                     NGKWFKRLTTKDHAHVEKALKSVEMWDYRHKRIGELSGGQKQRICLARMFATDPDILI
                     LDEPQTAMDKQSKIRFYDLLRHEAQVHGKAILMVTHDSEEMEDFVDKHIRLIRKEDVS
                     WKCFSMDLCKEPSKHQ"
     gene            6136..6942
                     /locus_tag="U0290_001728"
     CDS             6136..6942
                     /locus_tag="U0290_001728"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal ABC transporter permease"
                     /protein_id="HEM2301770.1"
                     /translation="MEMFLYGFMQRAFQASMIIAIIAPLLGVFLIIRRQSLMADTLSH
                     VSLAGVAFGLVLNVNPSVTTLIVVVIAALGIEYLRGVYATYSELSIAILMAGGLAVAL
                     VLMSLDQGGITTSVQQYLFGSIVTISKAQVQLLVILGIAIVVLFLVFKRFMFVLTFSE
                     DVAVAEGVPVRLISLLFSVVTGIAIAVIMPIAGALLVSALIILPAAIGMRISKGFLMC
                     VISAILIGLVGMFSGLVSSYQLGTPPGATITLMFIILFIISTVVLKMARK"
     gene            complement(6946..7626)
                     /locus_tag="U0290_001729"
     CDS             complement(6946..7626)
                     /locus_tag="U0290_001729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2301771.1"
                     /translation="MPKNLYNYQEFIRLSHEGKIAFEQIDVPKNASLLTEKIDIDNHI
                     YLVVDGYIALILNDGSQNPKIYSIQGKGTFLNYFTLLDRSNNHFNFKTLSGCSLYKYS
                     KADMEYFLSMFPENFGFQFFIMKNQTTHIYFKSLMASSPASEKLKTTFSNMALLHGVL
                     SDDDTVILPQAIKTSHLLSYSNLSKSCFYKDLQHLKTTNQIEKKEKSWIIHDQELYAM
                     IQNGQTSF"
     gene            7904..10243
                     /locus_tag="U0290_001730"
     CDS             7904..10243
                     /locus_tag="U0290_001730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent DNA helicase"
                     /protein_id="HEM2301772.1"
                     /translation="MRRVRISVRRLVEFVRRSGSIDNRMTNSDRALEGTKIHQLLQKE
                     AGEEYAAEVRLNLERIVDGIAFSLDGRADGIINSRMIDEIKTTETPMDEITEDFRPLH
                     WAQLICYGFMLAEKSDLAEVTLQLTYYQVVDKEVKQFQRVMSREELSVFVDDLLSQYA
                     IWAKASAAWEMKRNKTIQELTFPYDNYRSGQRELAIAVYRTISSEESLFCEAPTGIGK
                     TMSTLFPGIKAMGEGKTDKLFYFTAKTITRQVAEDALDEMRRKGLAARSVTITAKDKI
                     CFLDERKCEPDHCQFARGYYDRLNEALFDMLQSEEAITRQVVEGYARKYTLCPFELSL
                     DVALFCDVIVCDYNYLFDPVVYLKRFFAEGPGKYTFLVDEVHNLVDRARSMYSATLKK
                     STVMQVKRGLDSKKNKRLLNAINVMNKEMIVLNKKLKDLEKTTYVQKSELVDWNAAVL
                     KFTFVAKEWLPQNTQSELQVDVLDLYFESLRYTAIAEFYDERYVTQVTRNHRDLEIKQ
                     LCLDPAFLLSERLKLGSSSVLFSATLRPIDYYTNVLGGQEDTSRMIFSSPFKQKNMHL
                     LVADYISTKYQMRENSMEAVVDALYALVSGKNGNYIFFFPSFLYLQKVYDLFKEKYPN
                     IRLQKQETAMDEKQREHFLEDFHAENVETLIGFCVLGGVFSEGVDLRGNRLVGAAVVG
                     VGLAQLNHESDLIKDYYNETIGRGFDYAYQIPGMNKVLQAVGRVIRGESDRGVVLLIE
                     ERFSADRYRALFPTHWNHAKTVKSTDDISREVAGFWRNS"
     gene            10288..11100
                     /gene="yidA"
                     /locus_tag="U0290_001731"
     CDS             10288..11100
                     /gene="yidA"
                     /locus_tag="U0290_001731"
                     /EC_number="3.1.3.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-phosphatase"
                     /protein_id="HEM2301773.1"
                     /translation="MYKIIAIDIDGTLLNDAHEITLAVRDSIKAAKAKGVKVVLCTGR
                     PLAGIKKSLIELDLLDEGDYAITFNGAVVLETASEKTLADITLNKTELEEIYAFCHAE
                     NVNVTYFDGKNMYVPSRKITEITCQDSLLLGTPLYHLPVEEAPESIHVSKVMLLDSPE
                     KITDVIKKLPESIKEKFYVVRSVPYNLEFLQKGVNKGSALASLAEKLGVSQSEVMSIG
                     DQENDITMIEYAGMGVAMGNATEHIKEIANYTTTTNNEDGVAQAIQMLILDR"
     gene            11385..13499
                     /locus_tag="U0290_001732"
     CDS             11385..13499
                     /locus_tag="U0290_001732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="collagen binding domain-containing protein"
                     /protein_id="HEM2301774.1"
                     /translation="MSKNGNFLKKVGLAFLSILIVASTIFQTTVVKAATSYGSQFLNT
                     VELLDKDGVPQTDFGYYDNMDVHYTWSIPNSTNVKAGDTMDFTLPSQLALATDLAFDV
                     KDSNGQVVGTATVKRATNQVTLVFSDYVEKHSDIKGELDFWTTFNQKVITGNETVDLE
                     FPLENGTTQIDVKVGEKTPVSPTETLFKYGWVDASNPSLIHWVIRVNYAKVNIPNAVF
                     TDIIGSKQTLNFDSIKAFHGTYSADRIFTAGAAISSTNFSATSDGFSVALGDLTDSVQ
                     ISYTTTATDGGKSTQYDNTAKLAGTDFVPKQTSTWTPASGGGGEGGGTTGSVTLTKED
                     AKTKATLEGAEFKLVDSKGTVLQENITTNASGQLSIADLKFDTYQLIETKAPTGYKLD
                     TTPVEFTIGENNQAITVTKENTLNTGSVELTKLDSATKATLAGATFELQDKEGNTLQT
                     GLTTDENGVLKVTDLVPGSYQFIETSAPTGYKLDNSPVSFEIIASETDQIVKVTKENT
                     LEVGSVELTKLDSATKATLAGATFELQNKEGNTLQTGLTTDENGVLNVTDLVPGTYQF
                     VETKAPIGYELDTTPVVFEIIAGETDQPVKVTKENTLVPPTPVPPTPVPPTPVPPTPV
                     PPTPIPPTPLPPVPYEPTVPPTKPAVPVTPKKSENSEDSPKTTQIRITKSLPKTGDTN
                     SFAGLGVILIALSLSGLLLKRK"
     gene            13690..15432
                     /locus_tag="U0290_001733"
     CDS             13690..15432
                     /locus_tag="U0290_001733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="collagen binding domain-containing protein"
                     /protein_id="HEM2301775.1"
                     /translation="MKKRTTMTSNLKKFGLAFLSVILLVNVLFQTNFVKAATNYGSDF
                     LKTVELLDADGNPQTDFGYYDSIKVHYTWEIPNSTNVKEGDTMEFVLPPELKIVTDLD
                     FSLKDHDGNTVGHVIAKKSTGQVVITFTDFVEKNSNISGYLDFWTNWDKSLVEGNENV
                     PVEFPVNGTTETIDVGVGGKNQIDPDESLYKYGWANAEHPELIQWVVRVNYSKQNIQN
                     AVYEDFIGPKQVVDFNSIKAFHGEFDPDDNFTPGAEVPSSAITQTTEGFKVDLGNLTD
                     SVKISYYTTSTDNGASPNYTNKGQLTGDNFIKQEIEVATPTSGGGGGGEGTTGSVELT
                     KTDDSSQKNPLEGAEFKLVNGAGTIVQTGLKTNIDGKLTISNLKYDTYQLIETKAPQG
                     YVLDASPVEFTIDDAHQSLFLSKENSAIKGSVSLEKVDHDTQNLLADAEFELQDKDGN
                     TLQPNLKTDKMGKLTVTDLLPGEYQFVETKAPTGYILDATPVKFKISTEALNVTVTKE
                     NTKKPEIPKVPVPPKTPEQPDKPDKPEQPDKIISADSKRTTLPKTGDTPLVNGWGILL
                     VAISASGLIALRRK"
     gene            complement(15475..16311)
                     /locus_tag="U0290_001734"
     CDS             complement(15475..16311)
                     /locus_tag="U0290_001734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="STAS domain-containing protein"
                     /protein_id="HEM2301776.1"
                     /translation="MNESNGSMELYLREHTEEIINKWLSKIYENENTYTSFVYSPRYK
                     DELRADSEQTADLIISYFAGKKAFFEKLDKWLDNMYARRMENEVPLPEVITTLDKLRR
                     EFVSAVGDFCIHNDEVSKCDFSSSLSMVNHGFDRINEAFSAMYYNDIVKHLEQQHRLI
                     EEISTPVISITDKLAILPLMGSVDRERAEKLSEITANKCVHLGVEQLCIDLSGITYFD
                     DALGEMLTNLVTMLKLLGVEAFISGIQPKMAQQINRVELNLSIPAYHSLKAVLQDQTR
                     TI"
BASE COUNT         5543 a         2781 c         3324 g         4663 t
ORIGIN      
        1 aaatatatat ttaaaacttt ttagcaacag aaaggataat aaatttcgta cataaaaaca
       61 ataaactttc cctcccaaga aagccagtgg ggctgatata gctaaaagta aaggtggcgt
      121 tactttagaa tcaacaatag gaaataaaaa tattgaaatg ccagactggg attttaataa
      181 tcctgagtca atgaaagcat gggatttggc ttctggttct tatgcagaac aagtttctgg
      241 tgaagttcgt gcagtagttg gttcggattt gagaaaagga aatatttggg aaaatgttga
      301 gttacctaga ttaaaaaata atcctaacgt aacgaaaata acaacgattg atcctaaaac
      361 aggacttgaa aaaataattt ttgaaaggaa gtaagtgaaa tgaaaattac aggtaatagt
      421 tcacaggtga aatttgattt agagaatgga tatgtagtga aagcagatgg agaaatgtta
      481 gttggaggtg aatttgttgt atttaaagat tctatgaaga attgggaacc tccatatgaa
      541 aataaaaagc tttctgaatc tgaagtgcaa gaaattattc aacaggtaaa acagagcaca
      601 aatgaaaata cagtacaaat ttcatttgaa taaaagaaat ccgagaagta gagtagttgt
      661 ttaatcctaa atgttaacag gtggacattg ggaataataa ggaatggcgg aagataaaat
      721 atggataatt tttataaagg tttcgaagga tatccagaaa ttgactttta tacttatata
      781 aatggtgaaa aaacaggtat agaaatgtgg gaaggctact ttgacagtat tatgaatgaa
      841 cttagtccag ttgatggtag atgggtttct ttagcatatt attatcattt atatgaaggg
      901 tggtatgatg aaagcccatg ggtgattcca gataataaaa aagccttgga acaatttgaa
      961 acaatcgatg taaaaatatt ggacaatgtg acacaagagg ttatgatgaa actaattaag
     1021 ctattaaaag ataacttaga tagcgaaatt tttatagagt attcttaata aaacaaaggg
     1081 cacctttaga atatataaag gtgtcctttg ttttattcaa tatttttgac atttaaagtt
     1141 aactcattcc aatcattctc tatgtagcag tatatattct ttatttactt cactttcaaa
     1201 accttcctca tagcctcgga tgcaaaacgc cttaggaaaa gcgctaaaaa acaacgaaac
     1261 aacattcaat tttgacgaat atcaaaaaac gtaccgtggt caaatgtggg tgctaatgaa
     1321 aaatggtata gtagatgttg aagcaacgaa cgcgtacaat gccgccgtgc ttaacgggga
     1381 attaccacat gaaagcaatg aagcgcaaga agaagccgag ttgttgcagg cagttattca
     1441 atcggtgaaa gaaggaatag acccggttac tgggcaagag ataagtaaag cgcaagggtt
     1501 tagtattata agtggcttta tcttttacta cacttctggt gggtataaag gaaaaaaatt
     1561 gaagattcct aaaaaattat taaacaatat taagaatagg cgttcgaaag cacccaaact
     1621 atctacttta tccgaaaagg aacaattgaa actagcaaat aaatacaaga aaaaagcacc
     1681 aatcgcaatt ccagataacg ctaaaataaa agcccagaca aaaaaagctg gctatgaaca
     1741 aattacttat aaatggaatg atggtcaatt taagtatgaa gtgcgatggc atacaagaac
     1801 tccagaagca cctttagagc aggggaatac atgggttgtc caaagaacag ttcctggaaa
     1861 tggaggggac aagccacaaa cattcttcaa aattggtgat gatgagtggg tagaaggata
     1921 taaatggtat gatgctataa acgcaagaaa agcaggaaat gctactccag aacaaataaa
     1981 aattttagat aaaggtcatt ggaaggaatg aactaaatga ttaatagtag gttttatgaa
     2041 ggttttgaag gagaagcaga gatttccttc gttgctggtg ataataaact tgtaatttgg
     2101 aacggttatt ttgagactat tttagataac ttattagatt gtaatgtaga aagagaggga
     2161 gttctgaaag aattctttaa tcatgaggga tggtatgatg attcaccgtg gatgattgaa
     2221 gataactctc ttaccattac tcaattaaaa tgttttgata ttagcaaaat caatcagact
     2281 tcaatgaaag atgatttaga ggaagtagtt aaaacaatta tttcattttt tgaaaataat
     2341 cgatttagta aaatctatat tgaatacgaa taagaataaa aggcatacca cgacttatcc
     2401 gaaaataaga aagaagaaat tccgttaaat attaatgatt aaataatagg ttggaacact
     2461 tgaggctttt cagaatccta tatgttccag cctattgtta tatttgcgat actttttaat
     2521 atataaatta agttcattta tctgattggt gtcgttagta aataagatac acgcttactt
     2581 gcaaagatag aatttataaa tcaaaaagcc agcaattttt aaaattgctg gctttttcca
     2641 aactggcgaa ttacttctcc acccgaataa acttataact ataaggcgaa ccaaaagcat
     2701 gtttctgcac gccggtaata tccgtacgtt gcaacactgc tgtttgatgt tgataaagtg
     2761 gtaagatcgc cgcgtcatca tcaagcagaa ctttctcaga agctacgaac gcattccaac
     2821 gttcttcagg cttcgtcgca agtgttgtat cagttgattt tacaagttta tcataagcgg
     2881 ggctgttgta actcatatgg ttattaaagt aatcggataa gaataagctg ctatacgtcc
     2941 acggatcttt aaaatcaggc atccaagcag ccagtgacaa gtcataatta ccatcagaag
     3001 ttagctgtgt cgcgctcttc gaaggcatat ttttcacttt aatcgtcaca ccaggcaaat
     3061 tatcttcaaa ctgcgctttc aaataagcga aaatggtttt cgttgtttct tggtcatcgc
     3121 cgagaagttc gattgttact ttgtcagtgc caagttcttt ttgtgcttgt ttccaatatt
     3181 ttaaagcttc ttctttgtta taaactaaat ggtcgccgct atctgtacgg aaatcagcgc
     3241 ccgttgttgg gttttggacg aaatcttttg gaagcagtcc attcgccggg aatgagccgt
     3301 ccccgagaat ccgatccgtt aattgtttct tatcgacagc taaattaagc gcgtgacgca
     3361 aggaattgtt cgcaagtgga gtcgctttac cgtcgcgttt ttgattcatg cgcaaataac
     3421 tgatgagcgc atctttttcc gtttggaaat ctttcttgtc tttgtattgt ttcgcaaaat
     3481 cgcctgaaag tggcacgcgg tcagcttcgt ttgtattata aaggttcacg ccggcattaa
     3541 tatctttcgc gacttgcaca tcaatttcat ttactttgac attatctttg tcccaatatt
     3601 ggtcgttttt cgcgtaagtc catttattcg taatgttgcc gccccaatcc ttcataacaa
     3661 aaggaccatt gtacaaagtg tgcgcactat ctgtcccgta tttgtcgcct tgttttttca
     3721 caaagctttc tttttgtggg aaaaatgttt caaaagaaag aagtgaaatg aagtagggaa
     3781 ctggtttttt tagtgtgatt tcaagcgttg ttgggtcagt agcaacgaca ccaaggtcag
     3841 ttacaggtag tttgccttca ttgatttcag tggcgttttt aatcgaatct ttgaagagcg
     3901 cggagtatcc aggtgcggtt tttggatcaa cggcacggcg ccacgcgtag acgaaatcat
     3961 cagcggttac ttgagaacca tcggaccatt tcgcattttt ctttaattta atggtgtatt
     4021 tcgtttggtc agcgctgatt tctggcattc catcagcaac cccaggaaca aagttatctt
     4081 tttgatcaag tgtgtataat ccctcgaaga cttggttttg cgcggtgaag ctagcaaagt
     4141 cttcctcagc tgtcgtattt aaagtcagta attcactggt ttcaagaaat ttaattttgt
     4201 ccggggaagt ttttgtcgta gatttttcat tgtcatttcc gcaagctgta agtaaaagta
     4261 ctgtcaaaat ggcaaaaata ggcaatgttt tctttaaaaa atgcatggtt ttctcccctt
     4321 ctatctgtgt atttatcgtt attataagta ttccgataag ataagtcaag ttaatgattt
     4381 ggcaaaaaaa ctgcttgacg caaaaataat cccgtgataa gatattttgt gcaaataaga
     4441 atgattacgt tttgcgatac gcaatcataa tttacatagt gtaactttaa gttttaaatc
     4501 gtaatcatta cgaaaaagga gaggtaatat gaaaaaatgg tcatttttag ttgtaacagt
     4561 gttggcgttc gttttagttt tggccggatg cggtgctagc aacaataaag taagtggaga
     4621 taaggacaag ctcaaggtag tgacaacttt ttatccaatg tacgatttta cgaaaaatgt
     4681 tgcgggagat aatgcttcca ttgaaatgtt gattgatgcg gggacagaac cgcatgatta
     4741 cgagccaagc gcaaaggata ttgccaaaat cgaagcggct gatgttttcg tttataacag
     4801 tgaagacatg gaaacttggg tgccgagcgt acttaaaagc ttagattcga aaaaattaac
     4861 cgtgatttac gcgagtaaag gaatcgagct agtagaagga accgaagaag aagaccatga
     4921 tcatgagcac gaagaaggac accaccatga acatgatcct cacgtatggc taagcccagt
     4981 ccttgccgaa caagaagtga ctaatatcca gaacggtctt acaaaagcag ataaaacaaa
     5041 tgcagataca tacaaaaaga acgcagaaac atataaagag aaattaaaaa cactcgacaa
     5101 caaatttaaa acagcttttg aaggagcaaa acaacgcgat ttcgtaaccc aacatgcagc
     5161 cttccaatat ttagcaaaag agtatgactt gcatcaagtg gcaatcgccg gcctttcacc
     5221 tgaccaagaa ccaagcccag cacgattagc ggaattacaa aaatacgtga aagaaaataa
     5281 tatcagcacc atttattttg aagaagtagc ttcaccaaaa gttgcagaaa cacttgcaaa
     5341 cgaaacggga gcaaaactag aagtactaag ccctatcgaa ggaattacgg ataaagaaca
     5401 gaaaaaaggc atggattata ttgcttatat ggaacaaaac ttacaagcct tgcaaaaaac
     5461 aataaaataa ggaagcgatc aaatgaaata catcgatata gccaatattg gttttaaata
     5521 cgaatccgaa ccagtgcttg aaaacatttc ttttcaagtg agtgcgggag aatttattat
     5581 actaacagga gaaaacggag cagctaaatc aacactgctc cgtattattt tgggcatttt
     5641 acaacccgat aaaggttccg ttactttcgc caaaaagaac gcagatggcg ggcgactttt
     5701 gacaggttat gtaccacaac aaatagcatc atttaatgcg ggttttccaa gtacagttct
     5761 cgaactagta cggtcaggtc gttttccaaa tggtaaatgg ttcaaacggc tgactacaaa
     5821 agatcatgcg catgttgaaa aagcattgaa atctgtagaa atgtgggatt atcggcataa
     5881 acgtatcggt gagctatcag gtggtcaaaa acaacggatt tgcctggccc gaatgtttgc
     5941 aaccgaccca gatatattaa ttttggatga accgcaaacg gcaatggata aacaaagtaa
     6001 aatccgtttt tatgatttat taaggcatga agcacaagta catggtaaag cgattttaat
     6061 ggtaacgcac gatagtgaag aaatggaaga ttttgtcgat aagcatattc gccttattag
     6121 aaaggaggat gtgtcatgga aatgtttctc tatggattta tgcaaagagc cttccaagca
     6181 tcaatgataa ttgctataat tgctcctctt ttaggagttt tcttgattat tcgaagacag
     6241 tcacttatgg cggatacgct ttcgcatgtg tcgcttgcag gtgtggcctt tgggttggtt
     6301 ttaaatgtga atcccagtgt gacaacgctt attgtagtag ttattgcggc gctcgggatt
     6361 gagtatttgc gcggggttta tgcaacttat tcagagttgt ccattgcgat actaatggct
     6421 ggtggacttg ctgtggcgtt agtgttgatg agtttggatc agggtggaat tacaacaagc
     6481 gtgcagcaat acttatttgg ttcgattgta acaatcagta aggcgcaagt gcagctgttg
     6541 gtaattttag gaatagctat cgtagtattg ttcttagtgt ttaaaaggtt tatgtttgta
     6601 cttactttta gtgaagatgt tgcagttgca gaaggagtcc ctgtgcgttt gatttcgctt
     6661 ttattcagtg tggttactgg gattgcgatt gctgttatta tgccaatagc cggagcgtta
     6721 ctcgtttcag cacttattat attaccagct gcaatcggta tgcgaatttc aaaagggttc
     6781 ctgatgtgtg ttattagtgc aattctgatt ggcttagtcg gaatgttttc cggccttgtg
     6841 tcttcctacc aactaggaac cccacctggc gcaacaatta ccttaatgtt tatcattctt
     6901 ttcattattt cgaccgttgt tttaaaaatg gcacggaaat gatttttaga acgatgtttg
     6961 accattttgt atcattgcat aaagctcttg gtcatgaata atccaacttt tttctttctt
     7021 ttcaatctga ttggttgttt tgagatgctg caaatctttg taaaaacagc ttttcgaaag
     7081 attactataa gaaagtagat gacttgtttt aattgcttga ggaagaatta ctgtgtcatc
     7141 atcactcaga accccgtgta acaaagccat attcgaaaag gtcgttttaa gtttttcaga
     7201 agccggacta cttgccatta agcttttaaa gtaaatgtga gtagtctggt ttttcattat
     7261 gaaaaattgg aatccgaaat tttcgggaaa cattgaaaga aaatactcca tatctgcttt
     7321 cgaatactta tataatgaac atccagagag agtcttaaaa ttgaaatgat tattacttcg
     7381 gtcgagtaat gtaaaatagt tcaaaaatgt tcctttacct tgaatagaat agattttggg
     7441 attttggcta ccatcattta aaatcaaagc aatatatcca tcaactacaa gataaatatg
     7501 gttatctata tcgatttttt ctgttaatag gctggcgttt tttggtacat caatttgttc
     7561 aaaagctatt tttccttcat gggataaacg aataaattct tgataattat ataaattttt
     7621 tggcatgacg tcttctccaa tcttcttttg taaacataat tgtatcagaa tgcaaaagaa
     7681 cagttatacg cagtctaata gtatttcacg tgtaaatgtt tctaaaatgt gaaatattta
     7741 aatcattaaa agtctttttt tagtgaaaag tgctgtatag tcgctcttgt gcgcgagttt
     7801 agaatgtctt atcataaaag tccaaaatta gtatttttta ttgaattgtt acgaacgtag
     7861 gttctgtgtt ataattcaac tggattgtaa aggaggacta ttgatgagga gagtgcgtat
     7921 ttcagttagg cgtttagtag agtttgtgcg gagaagcggt agtattgata accggatgac
     7981 aaattcagac cgcgccttag aaggaacaaa aattcatcaa ttactccaaa aagaagctgg
     8041 ggaagaatat gccgcagaag tacggctaaa cctagaacga atagtggacg gaattgcttt
     8101 ttcgcttgat ggacgcgcag atggcatcat aaatagtcgg atgattgatg aaattaaaac
     8161 aacagagacg ccaatggatg aaattaccga agattttcga cctcttcact gggcgcaact
     8221 tatttgttat ggatttatgc ttgcagaaaa gtccgatttg gcagaagtta ctctgcaatt
     8281 aacgtattat caagtagttg acaaagaagt aaaacaattt caacgtgtaa tgagtcgcga
     8341 ggaactgagt gtttttgtgg acgatttact ttcccaatat gctatttggg caaaggcatc
     8401 tgccgcttgg gaaatgaaac gaaataaaac aattcaagaa ttaacgtttc catacgacaa
     8461 ctatcgaagt gggcaaagag agctcgccat tgcggtgtac cgaacaatat cttcagaaga
     8521 aagtttgttt tgtgaagcac ccacaggtat cggcaaaaca atgtcgacct tgtttcccgg
     8581 tattaaagct atgggtgaag ggaaaacgga taaattattt tactttactg caaaaacaat
     8641 cacgcgacaa gttgccgaag atgcactaga tgagatgcgt cgtaaaggac tggctgcaag
     8701 gagtgttaca ataactgcga aggataagat atgtttttta gacgagcgga aatgtgaacc
     8761 agatcattgc caatttgcgc gtggttatta tgatcgtttg aacgaagcgt tgtttgatat
     8821 gttgcaatcc gaagaagcga ttacccgtca agttgttgag ggttatgccc ggaaatacac
     8881 actttgtcca tttgaattat cgctggatgt ggctcttttt tgtgatgtaa tagtttgtga
     8941 ttataattat ttattcgacc cagtagttta cttaaaacgc ttttttgcag aaggaccggg
     9001 aaaatatact tttcttgtag atgaagtgca taatttagta gaccgtgcgc gctcgatgta
     9061 ttcggcgaca ttaaaaaaat caacagttat gcaagtcaaa cggggactag attcaaaaaa
     9121 gaacaaacga ttgctaaatg caataaatgt gatgaataaa gaaatgattg tgcttaacaa
     9181 aaaactaaag gacttagaaa aaacgactta tgtccaaaaa agtgaactcg ttgattggaa
     9241 tgcagctgtg ttaaaattca cctttgtagc gaaggaatgg ttgccgcaaa atactcagtc
     9301 agaattacaa gtggatgtgt tggaccttta ttttgaaagt ttaagatata ctgccattgc
     9361 ggagttttat gatgagcgtt acgtcacaca agttacgaga aatcacaggg atttagaaat
     9421 aaaacaacta tgtttggatc cggcgttctt attatcagag aggctaaaac tcggaagcag
     9481 ttcggtgctt ttttcagcaa cgcttcgacc aatagattac tatacaaatg tacttggtgg
     9541 tcaagaagac actagtagaa tgatcttttc ttcgccattt aaacaaaaaa acatgcattt
     9601 actagtagcg gattatatta gtacgaaata ccaaatgcgt gaaaatagta tggaagctgt
     9661 cgtagatgct ctctatgctc tcgtctctgg gaaaaacggc aactatatat ttttctttcc
     9721 atcatttcta tatttacaaa aggtatatga tttatttaaa gaaaaatatc ctaacatcag
     9781 gttgcaaaaa caagagactg ctatggatga aaagcagcga gagcattttt tagaagattt
     9841 tcatgcagag aatgtagaaa ccttgattgg cttttgcgtt ttaggaggcg ttttttcaga
     9901 aggggtagat cttcgcggga accgattagt cggtgcggct gtcgttggtg taggacttgc
     9961 gcaattgaat cacgaatctg atttaattaa agattattat aatgaaacga ttggtcgggg
    10021 atttgattat gcatatcaga taccaggaat gaataaggtg cttcaagcag ttggccgggt
    10081 tattcgagga gaatcagatc gtggcgtagt gttgttaata gaagaacgat tttctgccga
    10141 tcgttaccga gcgttgttcc ctacgcactg gaatcatgcg aaaacagtga agagcacaga
    10201 cgatatctcc cgagaagtgg ccggattttg gcggaatagc taattttcta gtagaataga
    10261 agtaattagt cattttggga ggaaattatg tataaaatta tcgcgataga tattgatggc
    10321 actttattaa acgacgcaca cgaaatcaca ctagccgtgc gtgactctat taaagctgcg
    10381 aaagcaaaag gggtaaaagt agtattatgt acaggccgtc cacttgcagg aattaaaaaa
    10441 agcttaattg aactagatct tttagatgaa ggggattacg caattacgtt taatggggcg
    10501 gtcgtgttag aaacagcttc agaaaaaaca ttagcagata taaccttaaa taaaactgaa
    10561 ctagaagaaa tttatgcatt ttgtcatgcg gaaaatgtta acgtcactta ttttgatggg
    10621 aaaaacatgt atgtaccaag ccgaaaaatc acagaaatca cttgtcaaga ttccctgcta
    10681 cttggtacgc cactatatca tttacctgta gaagaagcgc ctgaatctat tcatgtttcc
    10741 aaggttatgc tattagactc acctgaaaaa attaccgatg ttataaaaaa attaccagag
    10801 agtatcaaag aaaaatttta cgttgtccgg agtgttcctt ataacctaga gttcttgcaa
    10861 aaaggcgtaa ataaaggatc agcgctcgct agtttagcag aaaaacttgg ggtgtctcaa
    10921 agtgaagtca tgagtattgg tgaccaagaa aatgatatta ccatgattga gtatgctggt
    10981 atgggagttg caatgggtaa tgcgacagag catattaaag aaatcgctaa ctatacaaca
    11041 actactaata atgaagatgg tgtggcacag gctatacaaa tgctcattct ggaccgctaa
    11101 aaatagtgaa tagtagtaaa aacagaatat tgtcaaacag tgtaaatgga gatttaaaaa
    11161 gcatgcgagt cactataaaa agccgaaact ttctataaag gagtttcggc ttttttgttt
    11221 aattaagtac tttatgataa atagccctaa aaaaagtcac taaaagttca taaagtgggt
    11281 gttttaggag cagtacttcc gaaaagtgat atagcttgga gttactcaat tgtcatatga
    11341 tatgtgataa taacaaaact tcattagtaa aggatgaatt tgtaatgagt aaaaacggaa
    11401 actttttaaa aaaagttggg ttagctttct taagtatttt aatcgtcgct agcacaatct
    11461 tccaaacaac agttgtgaaa gcggcaacga gttatggttc tcagttttta aacacagtag
    11521 aactcttaga caaagacggt gtgccgcaaa cagattttgg ctactatgac aatatggatg
    11581 tgcactacac atggtctatt ccgaattcaa caaacgtaaa agctggagac acaatggatt
    11641 tcacactgcc aagccaattg gcgctcgcaa ctgatctcgc ttttgacgtg aaagatagta
    11701 atggtcaagt agttggaacg gccactgtaa aaagggcaac caatcaagtt accctcgttt
    11761 tcagtgatta tgtagaaaaa cattccgata ttaaaggaga actggatttc tggaccactt
    11821 ttaaccaaaa agtaattact ggaaatgaaa cagttgattt agaatttcct cttgaaaatg
    11881 gaacgacgca aatagatgta aaagttggtg agaaaacccc agttagcccg acagaaacgc
    11941 ttttcaaata tggttgggtg gatgctagta atccaagtct gattcattgg gttattcgag
    12001 tgaactacgc caaagtgaac attccaaatg ccgttttcac ggatatcatc ggctcaaaac
    12061 aaacattaaa ttttgattct atcaaagctt ttcatggaac ttattccgca gatcggatat
    12121 ttacagcagg cgcggctatt tccagcacca atttttccgc aacaagtgac gggtttagtg
    12181 tagcactagg agatttaacg gattctgtgc aaatttctta tacaacaacc gcaacagatg
    12241 gcgggaagtc tacccagtac gataataccg ctaaactagc cggaactgat tttgtaccca
    12301 agcaaacgtc cacttggaca cctgcatcag gcggaggcgg tgaaggcggc gggacaaccg
    12361 gttcagtaac actcacgaaa gaagatgcga aaacaaaagc aaccctcgaa ggtgcggaat
    12421 tcaaattggt ggattcaaaa ggcactgtgc tacaagaaaa cattacaaca aatgcgagcg
    12481 gacaacttag cattgctgat ctgaaatttg acacctacca attaatagaa acaaaagccc
    12541 cgacaggcta caaacttgat acaacaccag ttgaatttac tattggtgaa aataatcaag
    12601 caattaccgt gacaaaagaa aatacgctta acacaggctc cgtggaacta acaaagctag
    12661 actcagcaac caaagcaacc ctagccggag caacattcga attacaagat aaagaaggaa
    12721 acacattaca aactggttta actacagatg aaaatggcgt tctaaaagta actgatttag
    12781 tacccggcag ttaccaattt atcgaaacaa gtgctccaac aggctacaag ttagacaaca
    12841 gtccagtaag ttttgaaatc atcgcaagcg agacagatca aatagtaaaa gtaacaaaag
    12901 aaaacacact agaagttggc tccgtggaac taacaaagct agactcagca accaaagcaa
    12961 ccctagccgg agcaacattc gaattacaaa ataaagaagg aaacacatta caaactggtt
    13021 taactacgga tgaaaatggc gttttaaacg taactgattt agtaccagga acataccaat
    13081 ttgtcgaaac aaaagcccca attggatatg aacttgatac gacgccagtt gtttttgaaa
    13141 tcatcgctgg tgagactgac cagccggtaa aagtaacaaa agaaaacaca ttagtaccgc
    13201 caacaccagt gccaccaaca ccagtgccac caacaccagt accaccaaca ccagtgccac
    13261 caacaccaat accgcctact ccgttaccac cagtaccata cgaaccaact gtgccaccaa
    13321 caaaaccagc agtaccagtt acgcctaaga aatcagaaaa cagcgaggat agtccaaaaa
    13381 cgacccagat aagaataact aaaagtcttc ctaaaacagg agatacaaat agttttgctg
    13441 gcttaggagt aatcctaata gccttgtcat taagtggtct tctgctgaaa cgaaaataga
    13501 aaaaacaggc ttagataatt atctaagcct gttttaatta ggttgtttaa gaattgcaat
    13561 tgtcacaaaa tgttcacaat tagaaggctt tttttgtgaa ggagaaccga tttttagaaa
    13621 aaataatgta taatcactat gaattagcaa tatattatga ttgaaattaa ttaaaaaagg
    13681 atggttttta tgaagaaacg cacgacaatg acgtctaatc taaagaaatt cggattagcc
    13741 tttcttagcg ttatcttgct tgtaaacgtt ttatttcaga ctaactttgt taaagcagca
    13801 actaattatg gctccgattt tttgaaaact gtggaattat tagacgcaga tggcaatcct
    13861 caaacggact tcggttatta cgacagcatc aaggttcact atacttggga aatccccaat
    13921 tcaactaatg tgaaggaagg cgacacaatg gaatttgtgt tacctccaga gctgaagata
    13981 gttacagatt tagacttttc tttgaaagat cacgatggca acacggtagg tcacgtgatt
    14041 gctaaaaaat cgactgggca agtagttatt acatttacag actttgttga aaaaaattcc
    14101 aatattagtg gatatctcga tttttggact aattgggata aatcattagt agaaggaaat
    14161 gaaaatgttc cagttgaatt tccagtaaat ggtaccacag aaacaattga cgtgggcgtt
    14221 ggtggtaaaa atcaaattga cccggatgaa agtttatata aatacggctg ggctaatgct
    14281 gaacatcctg agcttatcca atgggtcgtt cgagttaact attcgaaaca aaacattcaa
    14341 aatgccgttt atgaagattt tattggacca aaacaagtcg ttgattttaa ttctatcaaa
    14401 gcattccacg gtgaatttga tccggatgat aacttcacgc caggagccga ggtaccatca
    14461 tcggcaatta ctcaaacaac ggaaggattc aaagtcgacc taggaaattt aacagattct
    14521 gtcaaaattt catactatac aacttctacc gataacggag catcacctaa ctacacaaat
    14581 aaagggcaat tgacaggaga taactttatc aagcaagaaa tcgaagtcgc gacaccaaca
    14641 tcaggtggtg gcggaggtgg agaagggaca accggatctg ttgaattaac gaaaacagat
    14701 gattcgtctc aaaaaaatcc attagaaggt gccgagttta aattagtcaa cggagcagga
    14761 acgatagtcc aaacaggact aaaaactaat atcgatggta aactaactat ttcaaatctg
    14821 aaatatgata cataccagct aatcgaaaca aaagctccac aaggatatgt gcttgatgcg
    14881 tctccagtag aatttacaat tgatgacgcg caccaatcat tatttctatc caaagaaaac
    14941 tctgccatca aaggatccgt ttcactagaa aaagtcgatc acgacacaca aaacctacta
    15001 gctgatgccg aatttgaact acaagataaa gatggcaaca cactacaacc aaaccttaaa
    15061 acagacaaaa tgggcaaact aacggtgacg gatttacttc caggcgagta tcaatttgtc
    15121 gaaacaaaag cgccaacagg ctatatttta gatgctactc cagtcaaatt taaaatcagc
    15181 acagaggcac taaacgtaac cgtaacaaaa gagaacacga aaaaaccaga aataccaaaa
    15241 gtaccagtac caccaaaaac accagaacaa ccggataaac cggataaacc agaacaacca
    15301 gataaaataa taagcgcaga tagcaaacgg acgactttac caaaaacagg ggatacacca
    15361 cttgttaatg gttggggaat actgctcgta gccatttcag cgagtggatt aattgcactt
    15421 agaagaaaat aatcaaaaaa ccgtaagcga taatacaatc gcttacggtt tttcttatat
    15481 agttctagtt tgatcttgta agacagcctt taacgaatga taggcaggaa tagataagtt
    15541 taattcaaca cgattaattt gttgtgccat ttttggttgg atgccagaaa taaatgcctc
    15601 gacaccaaga agtttaagca tcgtcactaa gttggtaagc atttctccaa gtgcatcatc
    15661 aaaataagta attcctgata aatcaataca caattgttcc acgcctaagt gtacgcattt
    15721 gtttgccgtg atttcggata acttttctgc tctttcacgg tcgacgctcc ccatcaaagg
    15781 aaggatcgct aatttgtccg tgatagaaat gacgggtgtg ctaatttctt ctattaaacg
    15841 atgttgttgt tctaaatgtt tgacgatatc attgtaatac atggcggaga aggcttcgtt
    15901 tatccggtca aacccgtgat taaccatgga cagacttgat gagaaatcac atttagacac
    15961 ttcatcatta tgaatacaaa aatcaccaac agcagaaaca aattcacggc gtagtttatc
    16021 aagggtggta ataacttcag gtaatggtac ttcattttcc atgcgacgcg cgtacatgtt
    16081 atccagccat ttgtcgagtt tctcaaaaaa tgctttttta ccagcgaaat aagaaatgat
    16141 taagtccgct gtttgttcac tgtcagcgcg cagttcatct ttgtaacgcg gcgagtaaac
    16201 aaaactagta tacgtgtttt cgttttcata aattttggat agccacttat taataatttc
    16261 ttcggtatgt tctcttaaat atagctccat acttccattc gattcattca t
//
LOCUS       DASDYO010000065        16256 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.065, whole genome shotgun sequence.
ACCESSION   DASDYO010000065 DASDYO010000000
VERSION     DASDYO010000065.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16256)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16256)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16256
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.065"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(340..1101)
                     /locus_tag="U0290_001735"
     CDS             complement(340..1101)
                     /locus_tag="U0290_001735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2301777.1"
                     /translation="MKVQRIQAIENLIHEKGSISLDDLCEQFNVSKNTVRRDIAKLLQ
                     KNTIQKVYGGVVSVYNNPEEIRPFENRDTENHTEKQLIGKAAADFIEENDLIFIDSGT
                     TTSCLAAALPTDKDITIITNSLDVINFASEMDNVKLIVIGSTFKTSTKSFVGVENWGF
                     FEKYNITKAFMAATALSTTHGVMNSDILEYEIKRHMMEKAREKFLLVDHTKVDKSALL
                     TYGELAEFDWLVTSKDMAGGCLGYCEDVGVLVRLV"
     gene            1296..2762
                     /locus_tag="U0290_001736"
     CDS             1296..2762
                     /locus_tag="U0290_001736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CoA-acylating methylmalonate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEM2301778.1"
                     /translation="MADVRKLKNYIDGEWVESKTDKYEDVINPATGEVLCQVPISTRA
                     ELDQAAVIAEQAFEKWSQVAVPRRARVLFSFQQLLIQHKEELARLITLENGKNLSEAR
                     GEVQRGIENVEFAAGSPTLMMGDSLASIATDVEAANYRYPVGVVGGIAPFNFPMMVPC
                     WMFPMAIALGNSFILKPSERTPLLMEKLVELFSEAGLPKGVFNVVYGAHDVVNGILEN
                     EIIKAVSFVGSKPVGEYVYKTGSANLKRVQALTGAKNHTIVLNDADLEDTVTNVISAA
                     FGSAGERCMACAVVTVEEGIADEFLAALRTAAQNVKIGNGLDDGVFLGPVIREENQKR
                     TIAYIEKGLEEGAKLTVDGRETGLSEGHFVGPTILEDVTTDMTIWKDEIFAPVLSVIR
                     VKNLQEAVRVANQSEFANGACIFTNNAKAIRYFREKIDAGMLGVNLGVPAPMAFFPFS
                     GWKSSFYGTLHANGKDSVDFYTHKKVVTARYSLKGYEE"
     gene            2775..3596
                     /gene="iolB"
                     /locus_tag="U0290_001737"
     CDS             2775..3596
                     /gene="iolB"
                     /locus_tag="U0290_001737"
                     /EC_number="5.3.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-deoxy-glucuronate isomerase"
                     /protein_id="HEM2301779.1"
                     /translation="MGKLLRKPLNERIAPGITFVQDINQANSPLSYVGFRLIEMEKGA
                     IYQEELTDLECCIVALTGKITVSEGDNIFAEIGTRANVFEKIPTDSVFISGGRTFQVK
                     ADTEKARVALCYSQANRDLPTTLIKASDNSIEQRGKYQNKRLVHNILPDVSEVASSLL
                     VVEVYTDGGNFSSYPPHKHDRDNLPAESLLEESYYHEINPEQGFIFQRVYTDDRTLDE
                     TMAVEHQNAVIVPEGYHPVGVPDGYDSYYLNVMAGPKRVWKFHNDPDHEWILERD"
     gene            3613..4590
                     /gene="iolC"
                     /locus_tag="U0290_001738"
     CDS             3613..4590
                     /gene="iolC"
                     /locus_tag="U0290_001738"
                     /EC_number="2.7.1.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5-dehydro-2-deoxygluconokinase"
                     /protein_id="HEM2301780.1"
                     /translation="MNLNKHSERKFDLITVGRACIDLNAVEYNRPMEETMTFSKYVGG
                     SPANIAIGTAKLGLKVGFIGKISADQHGRFIEKYMRDLNINTDGMVKDTEGRKVGLAF
                     TEIKSPDECSILMYRENVADLYLTPEEISEDYIKEARVLLISGTALAQSPSREAVLKA
                     VSLARKNDVAVAFELDYRPYTWTNTEETAVYYSLVAEQADVIIGTRDEFDMMENQVGG
                     KNEATKAHLFQHQAEIVVIKHGVEGSFAYTKAGETFQAKAYKTKVLKTFGAGDSYASA
                     FLYGLFSGESIETALKYGSAAASIVVSKHSSSDAMPTADEIKALIAQAE"
     gene            4603..6519
                     /gene="iolD"
                     /locus_tag="U0290_001739"
     CDS             4603..6519
                     /gene="iolD"
                     /locus_tag="U0290_001739"
                     /EC_number="3.7.1.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3D-(3,5/4)-trihydroxycyclohexane-1,2-dione
                     acylhydrolase (decyclizing)"
                     /protein_id="HEM2301781.1"
                     /translation="MTEKTIRLTTAQALVKFLNQQYIEVDGEMAPFVDGIFTLFGHGN
                     VVGIGQALEEAPGHLKVYQGKNEQGMAHAAIAYAKQKNRQRIYACSTSAGPGSANLIT
                     AAGTALANNLPVLFLPADTFATRQPDPVLQQLEHESSTAITTNDGFQAVSRYFDRVQR
                     PEQLMSALIRAFEVMTNPASAGPATICIAQDTEGEAFDYPVEFFQKRIHYLNRQIPTK
                     RELTEAARLIKASKTPVIIVGGGARYSRAREELIALSEQTNIPLVETHAGKSTLEFDF
                     KNNLGGTGILGTLAANKAIRDADLVIGIGTRYTDFTTSSKTAFDPTTKFININVSRMQ
                     TYKLDAFQVVGDARATLAELAPLLQDYQTQFGNKIAAYKTEWLDERARLQNTKFNREA
                     FTPEIKVQFDQATLNEYADRLQTEFTQTEALITINDNVAPDSIVVCSAGSLPGDLQRL
                     WNPAVPDTYHLEYGYSCMGYEINGALGAKMAAAKKQEVYAIVGDGSFCMSHSELLTSL
                     QYGKKINIMLFDNSGFGCINNLQMANGSDSFFCEFRDSDNQIMQVDYAKIAEGYGAKV
                     YRANTKEDLISALEDAKTQSKTTLIEMKVLPKTMSEGYLNWWNVGVSEVSNKESIKQA
                     YEEKQANLKNARLY"
     gene            6651..7022
                     /locus_tag="U0290_001740"
     CDS             6651..7022
                     /locus_tag="U0290_001740"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chaperone"
                     /protein_id="HEM2301782.1"
                     /translation="MEVFAEYLAEIENPDHRARTQEVLTWVAETFPDLKPEIKWNTPM
                     FTNNGTFIIGFSIAKQHMSVSPEVAGIERFEADIKEAGYSHTKGIFRITWAKPVDYDL
                     LAKIIEFNIQDKANYTSFWRV"
     gene            7116..7484
                     /locus_tag="U0290_001741"
     CDS             7116..7484
                     /locus_tag="U0290_001741"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301783.1"
                     /translation="MRIFCGIMSIQAGFIGALAEILSPDSKKNNLFMIPEDLAASSGY
                     LMSLAMVLAGILIICAYRNDFLIFMALILWLFGLIFGLIFTPSYSGFYFRPIVCLISF
                     LMGLFIFTDYTRHQDTGEER"
     gene            complement(7508..8623)
                     /locus_tag="U0290_001742"
     CDS             complement(7508..8623)
                     /locus_tag="U0290_001742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low temperature requirement protein A"
                     /protein_id="HEM2301784.1"
                     /translation="MAERKVSWLELFFDLIFVTAVASTTHLLLSVDNHPDKTAVYFGE
                     YLLMVTPMFWAWVGQTMFFNRFGEKIKLPELYMLPQMFFLILMTASFDLTFSNTYYTF
                     LIGYLGIRLITVIQYFVISKQLTGNARKVAILLGSVFLLGVLTTATSVFFEGFARYLV
                     MYLGIAVDIILPLFLAKTLRKVPVDFPHLAERFGLFVIITFGESIVAITTILVGHTLD
                     PYTIGYTLLGFLIICTLWASYFHSFEKIVNHHKETHGQYLIYGHFFIIISVMLLAANV
                     HLLFEGHLERNVLLLMLFGSVAVFFVSKQFVFAAHKKAEVTFSFWKDALLLLLLVGLF
                     FVNLYSDFPLFVSFVSIWVCALVDLGLQFGTSRSARM"
     gene            8754..9419
                     /locus_tag="U0290_001743"
     CDS             8754..9419
                     /locus_tag="U0290_001743"
                     /EC_number="3.2.2.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463920.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil-DNA glycosylase"
                     /protein_id="HEM2301785.1"
                     /translation="MVKTWEEFLKQEAKQPYFIELMEAVKDARAKGNVYPTEEDMFSC
                     FRLCPYDQVKVVILGQDPYHGPGQAHGLSFSVQKGVRIPPSLRNIYKELKTDLDIEPA
                     DHGYLAKWAEQGVLLMNTSWSVEEGKAGSHKKLGWATFTDHVLEELNNYDKPLVFILW
                     GNHAIKAASGITNPQHLLIKGVHPSPLAASRGFFESKPFSKTNAFLEEHGRKPIDWDL
                     NEQ"
     gene            9587..9886
                     /locus_tag="U0290_001744"
     CDS             9587..9886
                     /locus_tag="U0290_001744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463921.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301786.1"
                     /translation="MKHNFTEDDFVYGESWGLVHRGVLEDKEVERMKALRDKVVGKKG
                     VAQTTLKPIGSVRIDGEVYEARLKTGYLEVGKPIIAVGIDFGYVLVNEDIQEGEK"
     gene            9883..10827
                     /gene="floA"
                     /locus_tag="U0290_001745"
     CDS             9883..10827
                     /gene="floA"
                     /locus_tag="U0290_001745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463922.1"
                     /note="flotillin-like protein involved in membrane lipid
                     rafts; Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flotillin-like protein FloA"
                     /protein_id="HEM2301787.1"
                     /translation="MTMIGPIIIAVLIIIFLIVFFTLVPVGLWISALSARVPVGLGTL
                     IGMRLRRVVPSRVVKPLIKAVKAGLDLEVNQLESHYLAGGDVDNTVDALIAAHRANIE
                     LDFSRAAAIDLAGRDVLEAVQTSVTPKVIRTPEFTGVAQNGVEVKVITQITVQSNIER
                     IVGGAGEDTVIARVGEAVVSTVGETREHTDVLENPNSISKKVQEQGLGDGTAYTILSI
                     DIAEMRIGDNIKAKLDIEKANADMEVAQAAASKRKAEAIALEQENRAAVVAAEAEVPR
                     ALSRALEEGNLGVMDYYKMENVQSDTAMRESIAHEDEK"
     gene            10862..11311
                     /locus_tag="U0290_001746"
     CDS             10862..11311
                     /locus_tag="U0290_001746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463923.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301788.1"
                     /translation="MDLSDFLNSGWESVLVVLGIVGVIINFLSKAGKGTEEENKKAPQ
                     PRPNLRSMHQASRTQTTKKPEKRKVSQGTFTQNKEQDKVIAEQKAAQQKMLREIRRES
                     DVAKGKNIIKSTSSHHKKARKLRGRLQEAIITKEILDKPVSLRKNHL"
     gene            11455..12138
                     /locus_tag="U0290_001747"
     CDS             11455..12138
                     /locus_tag="U0290_001747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463924.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="C40 family peptidase"
                     /protein_id="HEM2301789.1"
                     /translation="MKIIATRRKIFFAFIALMISFSVLFLPTTNASAATTYKMTTTAD
                     VNVRAADNTKGKVIGFYKKGTTVTFTAKTKNNWYKTTYKGKVGYVSGKCVTTYKAPVA
                     TTQSFTALNNEARKHIGKRYKIGATGPSCFDCSGYTQYVYSKGVKKSIPRTAKQQYAS
                     AKKIKAQELKKGDLIFFNYGKGVAHVGIYVGNGKMLNAQNNGVKYDTITSGYWKKYIA
                     GYGRVANLK"
     gene            12194..12619
                     /locus_tag="U0290_001748"
     CDS             12194..12619
                     /locus_tag="U0290_001748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463925.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301790.1"
                     /translation="MQYKIKEMPLEELEPKVVEGLLEHKERLGYDIPKKDTEYIGFAA
                     LSEVGEIVGGVTAKISYGELYVSLLSVDPSTQGSGVGTELMAQIERYGRANNCHHISL
                     TTFSYQAPGFYKKCGFTELGRVKDFPIIGEEKYFFIKYL"
     gene            complement(12622..13422)
                     /gene="proC"
                     /locus_tag="U0290_001749"
     CDS             complement(12622..13422)
                     /gene="proC"
                     /locus_tag="U0290_001749"
                     /EC_number="1.5.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463926.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrroline-5-carboxylate reductase"
                     /protein_id="HEM2301791.1"
                     /translation="MKKIGFIGAGNMGTAMIRGLAQANLDNSEAIIVGGRNLEKLKPL
                     EAAFTGLQITTDTEKLVEQADIIILAVKPYTIPEILTSVKEQLTPDKIIISVAAGVTI
                     QDLEELTSAKTKIVRVMPNTPALVGEAMSSISPNINVSSEEINEVTAIFTSFGEAEVV
                     SENLMDAVIGVSGSSPAYVYMFIEALADGAVLSGMPRDKAYKFAAQAVLGAAKTVLET
                     GEHPGKLKDMVTSPGGTTIEAVKSLENDGFRSAVINAVQAAANKNSSM"
     gene            13770..13982
                     /locus_tag="U0290_001750"
     CDS             13770..13982
                     /locus_tag="U0290_001750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301792.1"
                     /translation="MDEWWLIRIIKYIEIVSKAGHLTTKKEHFFDNCPQVSKSKQHGK
                     LALDTIFDAMFLMVESAINGVFISYN"
     gene            14497..15720
                     /locus_tag="U0290_001751"
                     /pseudo
     CDS             14497..15720
                     /locus_tag="U0290_001751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728127.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5011 domain-containing protein"
     gene            15837..>16256
                     /locus_tag="U0290_001752"
     CDS             15837..>16256
                     /locus_tag="U0290_001752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2301793.1"
                     /translation="MPKIAKGNRLENVAFEYIKNKITTGEYPTGYRVVEAKLSQELNM
                     SRTPIRRAIINLCHSGFLVHQYNRGAFVQNTEVTITEFFSRMKLVELLMYESTEKLIL
                     REDYIVVDDIIEIAEKVIQYEKNKEYELMRDTFEDFIV"
BASE COUNT         5485 a         3006 c         3351 g         4414 t
ORIGIN      
        1 atttgttgga agctatcatt tacttcctgc tataaagttt cctatgagac cgatgcaaaa
       61 tggcgtggag atttcaaagt tagaaataca gggccgaaat caggctatta tgctcaagac
      121 atttcgttaa atagatatgc ggaaaatgaa gactttattg aatgttcttt tgatgcatca
      181 attatgacaa tgaatattat ttgtaaggaa atcattgtag aggaagtaag tgtcatagaa
      241 aattcgtttt tttggaaaaa ttattaaaat aaagttcaga gtttgtgaat ataaaaagaa
      301 gtcccatttc atcaaatggg gcttctttca tcacacaaac taaaccaacc tcaccaaaac
      361 cccaacatcc tcacaatacc ccaaacaccc accagccatg tccttcgacg taaccaacca
      421 atcaaattcc gccagctccc cgtaagtaag caaagccgac ttatccacct tcgtatgatc
      481 cactagcaaa aatttctccc tagctttttc catcatatgg cgcttaatct catactccaa
      541 aatatccgaa ttcatcaccc cgtgcgtagt agacagcgca gttgcggcca taaaagcttt
      601 cgtaatatta tatttctcaa aaaatcccca attctccacg ccaacaaatg atttagtact
      661 cgttttaaaa gtcgagccaa taacaatcaa tttcacatta tccatttcac tcgcaaaatt
      721 aatcacatct aggctgttcg taataatagt aatatcctta tccgttggca gagccgcagc
      781 gagacagcta gtcgttgtgc cggaatcaat aaaaatcaaa tcattttctt caataaaatc
      841 agccgccgct tttccgataa gctgtttttc tgtgtgattt tctgtatcac gattttcgaa
      901 cggccgaatt tcttcgggat tattataaac agaaacgacg ccaccataga ctttttggat
      961 ggtgtttttt tggagaagtt tggcaatgtc tcggcgaacg gtatttttgg aaacattgaa
     1021 ttgttcgcat aaatcgtcga ggctaatact gcctttttcg tgaattaaat tctcaatcgc
     1081 ttgaatgcgt tgtactttca ttttaaattc atcctttggc aaaattattt taattacact
     1141 atttataaca catgctcaaa aggtaatcaa ctatgatttt ttatggtgaa gttagtgaca
     1201 aaaattaaat tgactctcta attttattgg cttaagatgg ggttataatc gattaatggt
     1261 taacttatga gtaattttaa gtggagggat tttttatggc agatgtacgg aaattaaaga
     1321 attatattga cggcgaatgg gtcgagagta agacagataa atatgaagat gtcatcaatc
     1381 cggcgacggg ggaagtgctg tgccaagtgc cgatatcgac acgcgcagaa ttagatcagg
     1441 cggctgtcat tgctgaacaa gcttttgaaa aatggagcca agttgctgta ccaagacgtg
     1501 cacgggttct atttagtttc caacagttac tcattcaaca taaagaagaa ctagcaagac
     1561 tgattacact cgaaaatggt aaaaatttat ccgaagcacg cggtgaagtc caacgtggta
     1621 ttgaaaatgt cgagttcgcg gctggatcgc caacactaat gatgggtgat tcgctggctt
     1681 cgattgcaac cgatgtggag gcggcaaatt atcgctatcc ggtcggggtt gttggtggaa
     1741 tcgcaccatt taacttcccg atgatggtac catgttggat gttcccaatg gccattgcgc
     1801 ttggtaactc gtttatttta aaaccatccg agagaacgcc acttttaatg gagaaattgg
     1861 tggaattatt ttctgaagcg ggtcttccaa aaggtgtatt caatgtagtg tacggtgcgc
     1921 atgatgtggt taacggaatt ttagagaacg aaataattaa agcggtttct tttgttggtt
     1981 ctaagccagt tggtgaatat gtctacaaaa cagggagcgc aaatttaaaa cgagtgcaag
     2041 ccttaacagg tgcgaaaaac catacaattg tgcttaatga tgcggattta gaagataccg
     2101 tgacgaatgt tatttcagcg gcattcggat cggcgggtga acgttgtatg gcatgtgcgg
     2161 tcgtcacagt tgaagaaggc atcgcggatg agtttctagc ggcacttcgg acagccgcgc
     2221 aaaatgtgaa aattggaaat gggttagacg atggcgtttt cctcggtcct gtaattcgcg
     2281 aagaaaacca aaaacgcacg attgcttata ttgaaaaagg cttggaagaa ggcgcgaaat
     2341 taacagtaga tggtcgggaa actggacttt cagaagggca ctttgttggt ccaacaattt
     2401 tggaagatgt tacgacggat atgacgattt ggaaagacga gattttcgca ccagttttat
     2461 ccgtgattcg tgtgaaaaat ctccaagaag ctgttcgggt tgcgaatcaa tctgaatttg
     2521 caaatggcgc ttgtattttc actaataatg ccaaagcaat tcgctacttt agagaaaaaa
     2581 tcgacgctgg aatgcttggt gtgaatttgg gcgtacctgc tccaatggcg tttttcccgt
     2641 tttctggttg gaaatcgtcc ttttatggaa cgcttcatgc taacggcaaa gacagcgtgg
     2701 atttttacac gcataagaaa gttgtcactg cgagatattc attaaaaggt tacgaagaat
     2761 aggagggcgc aaaaatgggc aaactgttac gaaaaccgtt aaatgaaaga atagcgcctg
     2821 gcattacgtt tgtgcaggat attaaccaag ctaattctcc gctaagttat gttggttttc
     2881 gcttaattga aatggaaaaa ggtgctattt atcaggagga gcttactgat ttagagtgtt
     2941 gtattgttgc gcttactggg aaaattacag tgagtgaggg tgacaatatt tttgcggaga
     3001 ttgggacaag agcgaatgtc tttgaaaaaa ttccgacaga tagcgtgttt atttctggcg
     3061 gacggacgtt tcaagtgaag gcggacacag aaaaagctcg tgtagcgctt tgctactccc
     3121 aggcgaatcg agacttgcca acgacactta ttaaagctag tgataattcg attgagcagc
     3181 gcggaaaata tcaaaataaa cgactggtac ataacatttt gccagatgta agtgaggttg
     3241 cgagcagttt gttggttgtg gaagtgtata cggatggcgg aaatttttcg agttatccgc
     3301 cgcataaaca tgaccgcgat aatctgccag cggagtcgct tttggaagaa agttattatc
     3361 atgaaattaa tccggagcaa ggttttattt ttcaacgtgt ctatacggat gaccggacgc
     3421 ttgatgaaac gatggctgtg gagcatcaaa atgcggttat cgttccagaa ggctatcacc
     3481 cagttggcgt gccagatgga tatgattcat attatttgaa cgtaatggct ggaccgaaac
     3541 gggtttggaa atttcacaac gatccggacc atgaatggat tttagaacga gactaagagg
     3601 aggatttgga gcatgaatct aaacaaacat agcgaacgaa aatttgattt aatcacagta
     3661 ggacgcgctt gtattgattt gaacgcagtc gaatacaatc gtccaatgga agaaacgatg
     3721 actttttcta aatatgtggg tggttccccg gcaaatattg cgataggaac cgcaaaacta
     3781 ggcttaaaag taggctttat cggcaaaatt tctgctgatc aacatggtcg ttttattgag
     3841 aaatatatgc gtgatttgaa tattaatacg gacggaatgg tgaaagatac ggaaggccgc
     3901 aaagttggct tggcgtttac ggaaattaaa agcccagatg aatgcagtat tttgatgtat
     3961 cgcgaaaatg tagcggattt gtatttaacg ccagaagaaa tttcggaaga ttatataaaa
     4021 gaggctcgcg tgctgctcat ttctggaaca gctttagcgc aaagtccatc gcgggaagct
     4081 gttttaaagg cagttagttt agctcggaaa aatgatgtag ccgttgcttt tgaattagat
     4141 tatcgccctt atacgtggac aaacaccgaa gaaacggcgg tttattattc acttgtcgcg
     4201 gaacaagcgg atgtgattat tggcacgcgc gacgaatttg atatgatgga aaatcaagtc
     4261 ggtggcaaaa atgaagcaac aaaagcgcat cttttccaac atcaagcaga aattgttgtc
     4321 attaagcatg gggtggaagg ctcattcgca tatacaaaag cgggagaaac attccaagca
     4381 aaagcatata aaacaaaagt gctcaaaaca ttcggcgcgg gagattccta cgcatcagcc
     4441 ttcttatacg gtttatttag cggtgaaagt atcgaaacag cccttaaata cggaagtgcc
     4501 gcggcttcga ttgttgttag caagcatagt tcctcagacg cgatgccaac agctgatgaa
     4561 atcaaagcgc tcattgcgca agcggaatag gaggagatta tggtgactga aaaaacgatt
     4621 cgactaacaa ccgcacaagc tttggtaaaa tttttaaatc agcaatatat cgaagtggac
     4681 ggcgaaatgg caccgtttgt ggatggtatt ttcacgctgt ttggacatgg aaatgtggtt
     4741 ggtatcgggc aagccttgga agaagcccca ggtcatttaa aagtgtatca aggaaaaaat
     4801 gagcagggca tggcgcacgc ggcaatcgct tatgcaaaac aaaaaaatcg ccagcgcatc
     4861 tacgcgtgtt ccacatcagc aggaccaggt tccgcgaact taataacagc agccggcacc
     4921 gcacttgcaa acaatttacc tgtgttattc ctgccggccg acacattcgc aaccagacag
     4981 cccgacccag ttttgcaaca attagagcat gagtcgagca cggcaataac aaccaatgat
     5041 ggcttccaag cagtctccag atattttgac cgtgtgcagc gaccagaaca actcatgagc
     5101 gccctgattc gcgctttcga agtaatgacc aacccagcga gcgcgggacc agcaacaatc
     5161 tgcattgcgc aagacacaga aggagaagca ttcgattatc cagtcgaatt tttccaaaaa
     5221 cgaattcact atcttaatcg gcaaatcccg acaaagcgtg aactaaccga agcagctcgg
     5281 ctcatcaaag cgagcaaaac cccagttatc atcgtcggag gtggcgcccg ctattcaaga
     5341 gcacgcgaag aattgatcgc cctttccgag caaaccaaca ttccgctcgt cgaaacacat
     5401 gccgggaaat caacgcttga gtttgacttc aaaaacaacc taggtggcac gggaatcctc
     5461 gggacgcttg ctgccaataa agctatccgt gacgccgatt tagtcatcgg aattggcacg
     5521 cgctataccg atttcacaac cagttccaaa acggcattcg atccaacaac caaatttatc
     5581 aatatcaatg tcagccgcat gcaaacatac aaattagatg ccttccaagt ggtcggtgac
     5641 gctagagcaa ccctagctga actcgcacca cttttacaag attatcagac tcaatttgga
     5701 aacaagatag ccgcatacaa aaccgagtgg ctagacgaaa gagcacggct acaaaacacc
     5761 aaattcaacc gagaagcatt tacgccagaa atcaaagttc aattcgacca agcgacctta
     5821 aacgaatatg cagaccgctt gcagaccgaa tttacgcaaa cagaagcact tatcacaatt
     5881 aatgacaacg tggcaccgga tagcattgtc gtttgttcgg ccggttcact tcccggagat
     5941 ttgcaacgac tctggaaccc agccgtacca gacacctatc acttagaata tggctattcc
     6001 tgcatgggct acgaaataaa cggtgctctc ggcgcgaaaa tggccgcagc aaaaaaacaa
     6061 gaagtatacg ccatcgttgg cgacggcagc ttctgcatgt cacactcaga actactaaca
     6121 tccttacaat acggcaaaaa aattaacatt atgctcttcg ataattccgg ttttggctgc
     6181 attaacaacc tccaaatggc aaacggcagc gacagttttt tctgcgaatt ccgcgatagc
     6241 gacaaccaaa tcatgcaagt cgattacgcc aaaattgcag aaggatacgg agcaaaagtc
     6301 tatagagcca acacgaaaga agatttaatc agcgcactgg aagacgcaaa aacacaaagc
     6361 aaaactactt tgatcgaaat gaaagtacta ccaaaaacta tgtcagaagg ctatcttaat
     6421 tggtggaatg tgggagtttc cgaagtttca aacaaagaaa gtatcaagca agcatacgaa
     6481 gaaaaacaag caaacctgaa aaatgcccga ctatattaag caaaacaaaa acaagtccat
     6541 caccggactt gtttttgttt tgccacttca atagccccgc cttgcatcac accagttttt
     6601 ctttataata aaaagtaact gtaagattat gttttttagg aggaaataat atggaagttt
     6661 ttgcagaata tttagctgaa attgaaaatc cggatcaccg cgcgagaaca caagaagttt
     6721 taacatgggt ggcggaaact tttccagact taaagccaga aatcaaatgg aatacaccga
     6781 tgtttacaaa taatggcacg ttcataatcg gcttctctat tgcaaaacag catatgagcg
     6841 tttccccaga agtggctgga atcgaacgtt tcgaagcaga cattaaagaa gcgggctata
     6901 gtcatacgaa aggtattttc cgaattacgt gggctaaacc agttgactat gacctactag
     6961 caaaaattat cgagtttaat attcaagata aagcaaatta tactagtttt tggcgcgttt
     7021 aagtgatttt tagttacttt gtcgcgtagt aaatccagat tttttatgcc ataattaata
     7081 agctaaaatg tatttttata aaagagtggt gtgaaatgcg tattttttgt gggattatgt
     7141 caatccaagc aggctttatt ggtgctcttg ctgaaatact aagtccggac agtaaaaaaa
     7201 ataacttatt catgataccg gaagatcttg cggcatcatc aggctattta atgtctcttg
     7261 cgatggtttt agcgggaatt ctaataattt gtgcttatcg aaatgatttt ctaatattca
     7321 tggcactaat tttatggctc tttggactta tttttgggct cattttcacc ccgagttatt
     7381 cgggttttta tttccgccca atcgtatgtt taataagctt tttaatgggc ctatttattt
     7441 ttacagatta cacaaggcac caagacacag gcgaggaaag gtgagcgaaa tgctcatctt
     7501 tttttattta cattcgtgcc gaccgcgaag tcccaaactg caaaccaaga tccaccagcg
     7561 cacaaaccca aatactcaca aaactaacaa atagaggaaa atcactatac aaattaacaa
     7621 aaaacagccc cactagaagt aacaataaca acgcatcttt ccaaaaagaa aatgtcactt
     7681 cggccttttt atgagcagca aaaacaaatt gtttcgaaac gaaaaacaca gctacagaac
     7741 caaacaacat caataacaaa acattgcgtt ccaaatgccc ctcgaacaac aaatgcacat
     7801 tcgccgcaag taacatcact gaaataataa taaagaaatg tccataaatt aagtactggc
     7861 catgggtttc tttatggtgg ttgacaattt tctcaaagct atggaaatac gatgcccaaa
     7921 gcgtacaaat aattaaaaag ccaagcaacg tgtacccaat cgtataggga tcaagcgtgt
     7981 gcccaactaa aatagtcgta atcgcaacaa tactttcacc aaatgtgatg ataacaaata
     8041 atccaaaacg ttccgcaaga tgtggaaaat caaccggcac tttgcgcaat gttttagcta
     8101 aaaataacgg taaaataata tcaactgcaa tcccaagata catcactaaa taacgcgcaa
     8161 atccttcaaa aaacaccgaa gtcgcagttg tcaaaacacc tagtagaaaa acactcccaa
     8221 gaagtatcgc cactttccgc gcatttcccg tcaactgctt actaataaca aaatactgga
     8281 taaccgtaat taagcgaata cctaaataac caattaaaaa agtataatac gtatttgaaa
     8341 acgttaaatc aaaactcgct gtcatcaaaa ttaagaaaaa catttgcggc aacatataaa
     8401 gttcgggtag tttgattttc tcaccgaagc gattgaaaaa cattgtctgc ccaacccacg
     8461 cccaaaacat cggcgtgacc atcaataaat attcgccaaa ataaacagct gttttatccg
     8521 gatgattatc gacgctaagt aacagatgcg tcgttgaagc aacagcagtt acgaatatta
     8581 aatcaaaaaa tagttctagc caagaaactt ttctttccgc cacaatctca ccccattatt
     8641 atttcttttt tcaagtatac cacgtgaatc cgcctgcctt ttgacagttg ctcgccgtga
     8701 aaagtataat ggaaggacaa aatcatggaa ctactgagat gggagaatta aaaatggtaa
     8761 aaacatggga agaattttta aaacaagaag cgaaacagcc ttattttata gaattaatgg
     8821 aagcagttaa ggacgcgaga gcaaagggga atgtctatcc gactgaagaa gatatgtttt
     8881 cgtgtttccg cttatgtccg tatgatcaag tgaaagttgt tattttagga caagacccgt
     8941 atcatggtcc tggacaagcg catggcctaa gcttctccgt gcaaaaaggg gtgcgaattc
     9001 cgccaagtct tcgtaatatt tataaagaat taaagacaga cttagatatt gaaccagctg
     9061 accacggcta tcttgccaaa tgggcagagc aaggcgtact tttaatgaac acgagttgga
     9121 gcgtggaaga aggcaaagct ggtagccaca aaaaactagg ctgggcaaca tttacagatc
     9181 acgttttaga agaactaaat aattacgaca aaccacttgt atttatttta tgggggaatc
     9241 atgctataaa agccgcaagt ggcatcacaa acccgcaaca tttacttatt aaaggagtac
     9301 acccatcacc gcttgccgcg agtcgaggct tttttgaaag caaaccattt tcgaaaacga
     9361 atgcatttct tgaggaacat ggaagaaaac caattgattg ggacttaaac gaacagtaaa
     9421 aaaatacgtt attacaaaat tttgtttttt ctattatata gttttttaca aaagtgaaaa
     9481 aatttacata attcgcctaa aagcttttta cataaggttt ctttcatgtt atggttatta
     9541 taggagaaag taaaatttaa aaaagttcct aaagaaggtg actagtttga agcataattt
     9601 tacagaagat gactttgttt atggagaatc atggggactc gtgcatcggg gggttttaga
     9661 ggacaaagaa gtagaaagaa tgaaagcgct acgagacaaa gtagtgggta aaaaaggcgt
     9721 agcacaaacg acacttaagc cgataggtag tgtcagaata gacggagaag tctatgaagc
     9781 tcgcttgaaa acaggttatt tggaagttgg aaaaccaata attgcagtag gtatcgattt
     9841 cggatacgta ctagtcaatg aagatataca ggagggagaa aaatgacaat gattggacct
     9901 attattatcg cagtattgat tatcatcttt ttaatcgtat ttttcacttt agtaccagtg
     9961 gggttatgga ttagtgcatt atccgcacgt gtaccagtag gactaggaac tttaatcgga
    10021 atgagattgc gtcgggttgt accttctcgc gttgtaaaac cgttaattaa agcagtaaaa
    10081 gctggacttg atttagaagt aaaccaactt gaaagtcact atttagcagg tggggacgtg
    10141 gataacacag tagatgcgtt aatcgccgca caccgcgcaa atattgaatt agatttcagc
    10201 cgtgcagcag caattgacct tgctggacgt gacgtacttg aagcagtaca aacttccgta
    10261 acaccaaaag ttatccgtac acctgaattt actggtgtgg cacaaaacgg ggtagaagta
    10321 aaagttatta cgcaaattac cgtacaatcc aatattgaac gtatcgtcgg tggtgctggg
    10381 gaagatacag ttatcgctcg tgtcggtgaa gccgtagttt ctacagtcgg tgaaacgaga
    10441 gaacatacag atgtacttga aaatccaaac agcatttcga aaaaagtcca agaacaagga
    10501 cttggagacg gaactgctta cactatttta tccattgata tcgctgaaat gcgtattggt
    10561 gacaacatta aagcaaaact agacatcgaa aaagccaacg cggacatgga agttgctcaa
    10621 gcagctgcat cgaaacgtaa agcagaagcg attgccctag aacaagaaaa cagagcagcg
    10681 gttgtagccg cagaagcaga agtaccacgt gcgctatctc gcgctttaga agaaggtaac
    10741 cttggtgtaa tggattatta caaaatggaa aatgtacaat cagatacagc tatgcgcgaa
    10801 tcgattgcac acgaagacga aaaataaacc ttgatctttt gcaagaaaga aggtgttttc
    10861 aatggattta agtgattttc taaatagtgg ttgggaaagt gttctagttg tccttggtat
    10921 tgttggtgtc attataaatt tccttagcaa ggccggtaaa ggcacagaag aggaaaataa
    10981 gaaagcgcca caacctagac caaatttgcg ttcaatgcac caagcaagcc gtacgcaaac
    11041 cactaagaaa ccagaaaaac gcaaagtgtc acaagggaca ttcacacaaa ataaagaaca
    11101 agacaaagta attgctgaac aaaaagcagc gcaacaaaaa atgctaagag aaatccgccg
    11161 agaatcggat gtggcaaaag ggaaaaacat cattaaaagc actagtagtc atcacaaaaa
    11221 agcgcgtaaa ttgcgcggaa gattacaaga agcgataatt acgaaagaaa tccttgataa
    11281 gcccgtttct ttacggaaaa atcatctata aaagcaaacc caagaactag tttcttgggt
    11341 tttttgtttc tgtgtcaaaa ctgttacata ataacgccaa gttttaaaat ccctgtatta
    11401 caactgtaac attgacctgc tatgctgtgt gtatataaaa aaggggtgcg tggattgaaa
    11461 ataatagcaa cgagaagaaa gatttttttt gcgtttatag ctttaatgat ttctttttca
    11521 gtactatttt taccaacaac taacgcttca gcagcgacta catataaaat gacgacaacg
    11581 gctgatgtaa atgttcgcgc agcagacaac accaaaggta aagtcatcgg tttttacaaa
    11641 aagggtacaa cggttacttt cactgctaaa acaaaaaaca actggtataa aacgacatac
    11701 aaaggcaaag ttggttatgt ttcaggtaaa tgtgtgacta catataaagc acctgttgca
    11761 acaacgcaaa gttttaccgc attaaataac gaagcaagaa aacacattgg caaacgctac
    11821 aaaattggcg ctactggccc aagctgtttt gattgttcag gttacacaca atatgtatac
    11881 tctaaaggag ttaaaaaatc cattcctcgt acagcgaagc aacaatatgc ctctgctaag
    11941 aaaattaaag ctcaagaact aaaaaaaggt gatttgattt tcttcaatta tggtaagggt
    12001 gttgcacatg ttgggattta tgttggaaat ggcaaaatgc ttaatgcgca aaataatggc
    12061 gtaaaatacg acacaatcac atctggctat tggaaaaaat atattgctgg atatggacga
    12121 gtagcaaatt taaaataatt ttactgagcg tcacttttta gtgatgcttt tttgtatgaa
    12181 ggaggagtta gggatgcaat ataaaataaa agaaatgcca ctggaagaac tagaacctaa
    12241 agtagtagag gggcttttgg aacataaaga aagattaggt tatgacattc caaaaaaaga
    12301 cacagagtat attggctttg cggctttaag tgaagtaggg gaaatagttg gaggagttac
    12361 agcgaaaatc agctacggag aattatatgt gtctcttctt tctgttgatc caagcacaca
    12421 aggatcgggc gtgggtacag aattgatggc ccaaatagaa agatatggta gagcaaataa
    12481 ctgccaccat atctccttaa caacatttag ttaccaagcc ccaggatttt ataaaaaatg
    12541 cggttttact gagcttggac gtgtaaaaga ttttcctata ataggagaag aaaagtactt
    12601 ttttattaaa tatttataga attacatcga actatttttg tttgcagcag cttgaactgc
    12661 attgataaca gcggaacgga aaccatcatt ttctagtgat ttcactgctt caattgtagt
    12721 tccgccggga gaagtaacca tatctttaag tttacctgga tgttcgccgg tttctagaac
    12781 cgtttttgcg gcacctagca cagcttgtgc ggcgaattta tatgctttat cgcgaggcat
    12841 gccacttagg acggcgccgt ctgctaaagc ttctatgaac atataaacat aagctggtga
    12901 agaaccgctg acgccaataa ctgcatccat caaattctcg gaaacaactt ccgcttctcc
    12961 aaaactagta aaaatagctg taacttcatt aatttcttca gatgatacgt ttatgttagg
    13021 cgaaatagat gacattgctt caccgacaag cgctggtgta tttggcatca cacgaacaat
    13081 ttttgttttt gcggaagtga gttcttctaa atcttggata gttacgccag ctgctacaga
    13141 aataataatt ttatcaggtg ttagctgctc ttttaccgac gttaaaattt ctgggatagt
    13201 gtaaggtttc accgctaaaa taataatatc tgcttgttct acgagttttt cggtatcggt
    13261 tgttatttgc aggccagtaa atgccgcttc cagtggtttt aatttttcga gatttcgacc
    13321 accaacaatg attgcttcgc tgttatctaa attcgcttgt gctaagcccc gaatcatcgc
    13381 agttcccata ttacctgcgc caataaagcc gattttcttc attttattcg cccctaacaa
    13441 aattcttttt ttctattatc tcatgttaca cggctttgtc cagtttttgc tgaaggctat
    13501 cattgtgtca cagaggctta ttctaaatac agcgatatta attttgatga atcatctcgt
    13561 cgaaagtagt ggaaaaggta ttatcgccaa attttatcta tttctaatgg tttctaattg
    13621 gcagtttgca gtagaaaaaa atattagatt actagctaaa agtatcttag tgaagaaaac
    13681 taagatattt tttattttcg attgtatttt ttgtttggga aacccgattt tgtgtttgat
    13741 cagtaaacac agtcgaaaag aatgttcata tggatgaatg gtggctgatt agaataatta
    13801 aatatatcga aattgtgtcc aaagctggtc acttgacaac taaaaaggaa catttttttg
    13861 ataattgtcc tcaagtaagt aaatctaaac aacatggaaa attagctttg gatactattt
    13921 ttgatgctat gttcttaatg gttgaaagcg ctataaatgg cgtttttata agctataatt
    13981 gatattggat aacagttcca actacataat atagcgaggt gaaaacgatg aatttctttc
    14041 tacaattatt aggtaacttc tctggaggtt taaatttccc agacgtaaca gaagtactaa
    14101 acaacttaat caaagcaatt tttggttgat ttcaaaaaaa taaaacgtaa aggaggctac
    14161 tacaagtgaa ttttttctta caattattag gtaatttttc tggagcgatt aactttccag
    14221 acgtaacaga agtactaaac aatctaatca aagggatttt tggttgatcc taagaacata
    14281 aatcagtaaa ggaggctact acaaatgaat tttttcttgc aattgttagg taatttttca
    14341 ggtgcaatcc gctttccgga cgtagcagaa gtactaaaca acttaatcaa aggtatcttt
    14401 ggttaattgc caattagaat aagttgaaat atagggttaa ggctaactta accctatttt
    14461 ctaattaaag atgtaaataa ggaggatttt aaatccatga aaaaaataat cgcgttaatc
    14521 acagcagttg cacttctatc aatgattgga tttgccttta tccctggtac tgttgcgaat
    14581 gcagcgaatt catcagaaag cagtttaaca tacaaagatg tacgcagtgg attttacttt
    14641 gttggttatg aaaatgtaca acttgaaaca ggaaaaacat acaagtacac agtagcgtat
    14701 gaagcaaatg ttgatatgaa aatgacagat actattacag gacaatcagc aaaagcagga
    14761 ctttttacac caaaatcatc cggtgccgag ctgaacacta gttacgtaag ccgaacaaag
    14821 aataacgtta tagacgtagc tgatgcaggt aataaggttt ttaaacacac atttgaattt
    14881 acagcgaagg aaaatacaaa agcagatatc ggtgttttct taggagcagg ttctgttctt
    14941 ccaacaactc cagaaaccac gtccctttgg aaaaacgtaa ccgtgacaaa tgaaactcca
    15001 ctagtataag cggaggctcc agttattagt gcagaagata aaactatcaa tcaaaatgaa
    15061 agttttaatc cactaaatga agtcactgcg tcagacgaaa aagacggtga tattacaaag
    15121 gacatccacg taaccaaaaa tacggtagat acgactaaga gtggcaaata tgatgtggat
    15181 tatagcgtta caaattcaag caacttaaca acgacaaaaa gtattaaagt aaccgtaacc
    15241 ccagcagcaa taagcaaaaa tacagcccca gttattaatg caaaagatca aacaatcaaa
    15301 gttggagatg tgtttaatgt gttaaaagga gttactgcga aagataacga agatggtgat
    15361 ttaacagcaa aaatcaaagt gaccaaggat acagtgaata attcgaaaaa aggtgtttat
    15421 caagttacat atactgtgac agattctggc aatctatcag cttcacttac aattaaagtg
    15481 actgtaactc aagatggaaa actaatagta aatccaagtg atccaacaaa gccatctatc
    15541 acaaaaacac ctgtggaacc aacaaaaatt gaaaaagatc ctgaaaatag agcgacttcc
    15601 gttttgaaag caagtaaaat accaaaaact ggtgatagtt caatgatatg gctagtattt
    15661 gtcggactcg gcttaacagc tattggtatt agttcttatc aaaaaaaagc aaataaataa
    15721 tgcatactgg atgaaaagag tattttagat tagatactct tttcattaac tagatggtaa
    15781 aatggcattc taaagctgtt tttaaacagc tttatagaga gagaggggaa tcatttatgc
    15841 caaaaattgc taaaggtaat cgactcgaga atgttgcttt tgagtacatt aagaacaaaa
    15901 tcacaactgg ggagtatcca acgggttatc gtgttgtaga agcaaagtta tctcaagaac
    15961 taaatatgag taggacacca attaggcgag cgattatcaa cctttgccat tctggatttt
    16021 tagtccacca atataatcgg ggtgcttttg ttcaaaacac tgaagtaact attacagaat
    16081 ttttttcgcg aatgaaatta gtcgaactat tgatgtatga aagtacagaa aaattaattc
    16141 tacgtgaaga ttatattgta gtggacgata taatagaaat agcagagaaa gtaattcaat
    16201 atgaaaaaaa caaagaatat gaattaatgc gcgatacgtt tgaagatttt atcgtc
//
LOCUS       DASDYO010000066        16211 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.066, whole genome shotgun sequence.
ACCESSION   DASDYO010000066 DASDYO010000000
VERSION     DASDYO010000066.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16211)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16211)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16211
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.066"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..479
                     /locus_tag="U0290_001753"
     CDS             <1..479
                     /locus_tag="U0290_001753"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301794.1"
                     /translation="VLSYYLENPKQFGKMLDLSAQNSFSIRPFEMGNFEKATGYKFKE
                     KTHFFSIYSDVKEKLAPAKFTFLILWALVFLICYGVSAFKHFREKNIRGMLLFDLVIL
                     LIGSGFAVILVTIVGDGEADLTKHNFLFNVCFDLTMLIGAASLLEVYMKKRGERNA"
     gene            472..1968
                     /locus_tag="U0290_001754"
     CDS             472..1968
                     /locus_tag="U0290_001754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301795.1"
                     /translation="MRKKLIVSILLAFMIFVVGGHSAIAKTDDGVVVFYDSLATGTEN
                     EGNMDALLRMLNSLGKRVTIYSWEENPDLSQTSEIIVLQNKKDGLASDWTEKLAKSKA
                     KIAYIGGNPPTFLTDKLQLKTKAITEASITIQTQAGLSGKPQLVNETNLITSYKGTSF
                     GEMDAAENGQAAYGVQAGNYAYAPLFQADNTSEFALMDVLKALFDIKTTTNQYAFITG
                     VNPFIDFDLLKKTADTFYEKGIPFIVSAGPVFYNQDFQAAKNYAEILRYVQAKNGTIM
                     MNVPAVTYGDSPAGELEKIMQKSVHFFAENDVAPLGVTAELYWNFDKVYGVEGFAPFN
                     TGILLPNQKIIHTTKVNNGSAFEKSPYSVANDFYATTTEGRTFPVDIAITYPFFDNEK
                     ELKAAAEELANDNISDFRFQDHGVKTNKDTIESSAGSLYINNQSVTLDGDLNYIKTKN
                     KTVKQAGSLEGFFGYQNTFFTIVIVLSLGIIGVLFVFGYRLYMKKYMK"
     gene            1979..3229
                     /locus_tag="U0290_001755"
     CDS             1979..3229
                     /locus_tag="U0290_001755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464057.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM2301796.1"
                     /translation="MVIADYLALFAVVCIWGLLLINIVLIVAGYVYYLKNEARKVPEI
                     PAEVPFVSVMVPAHNEGKVIVKTVESLLAFDYPVDRYEIIVINDNSSDNSAELLAAIQ
                     AKNPTRFLKIINTDNITGGKGKSNALNIGFAESRGELVAIYDADNTPERQALRILVGE
                     ITNDAKLGAVIGKFRTRNRNASWLTRFINIETLSFQWMAQAGRWALFKLCTIPGTNFI
                     VRRSLLEEIGGWDVKAVAEDTEISFRIYMMGYRIKFQAKAVTWEQEPQTLPVWFKQRS
                     RWAKGNIYVILKNVPLLFKREGRRVRFDILYFLSIYFLLLTSLIVSDVLLVLYALGLV
                     HTTLAGLSGALWLLAILLFVAGTFITLTTEKGEISFSNLLFIMLMYVTYCQLWMVVAA
                     YGFFIFLKDTVLKRETKWYKTERF"
     gene            3245..5296
                     /locus_tag="U0290_001756"
     CDS             3245..5296
                     /locus_tag="U0290_001756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464058.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cellulose biosynthesis cyclic di-GMP-binding
                     regulatory protein BcsB"
                     /protein_id="HEM2301797.1"
                     /translation="MKKLTVIGLLMFAVLFLYRPDVLAADKNYQTVFGTDKTAQGKFT
                     TTKQNFTVENYWDVSNANVKLVYTITQLSEKEVSTMTLKINDVAFYSFKPDKADKGTK
                     QIEIQIPKDKLKKGVNVLSIESFVYTDLPDGRCTIDDTPANWLQFDKTSAVNVSYSDK
                     AFQKTIAEFGERFTGIDIVKSEQGAVAVSNKAGDAELGAALEGLSGFSAANTLEDKNI
                     AFGQYEEAKTRDGKNYLVLFSSYDNLPNDLKSQIKDDNKLEKQALFQVVTVGNTNTLV
                     VTSKSNDALKKAGKLIANQNYLSQLGTNTKWLTTDEKIDTPATNVDKNTKLTTTGDKL
                     KGIGHITQDYFISMPANRSASTGTEVSLDFRYAQNLDFEHSLVTILVNGKPIGSQKLT
                     AKKANGDKLTFQIPSDLNVKGDFSVTVAFDLVLTNNYCGFIADSEIPWAYITPESKIN
                     LNTSEETDLLFEQYPYPFIANGDFNNAVVVVPDKLTTEDTDSLANIFNLLGRFHDGNR
                     GDLTAVHAANWKKPKEGSNIVAVGTMNNNPVIKNANDDLYFQYNKTGDYFLSNEKISI
                     EKNYGKQLGSVQLITSDGVPILAVTGPGAKQTELGSDLIATKANLAKIYGDGAIVDTD
                     NTIHSYRFKKAADTQEESFGSKISNNKEVTVFGAFALLTVVILVVAVLLILRKYRRSR
                     K"
     gene            5311..6165
                     /locus_tag="U0290_001757"
     CDS             5311..6165
                     /locus_tag="U0290_001757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GGDEF domain-containing protein"
                     /protein_id="HEM2301798.1"
                     /translation="MKKITNNLFADIGFLFFILLCFITIGFMINTPDEYLRNIILLNI
                     TFLLVIITYFTNLTLGLILNVLYIFIYATYIIYEIVANQIAYGFGSYFWLIITPLFTV
                     ASAMFTRNTSRLQEENTKIKQQNLYLGTIDQETLLKNIVSFQNDERIFSSISRRYDLP
                     LSLMVIKVRHWRELKRFQSEEEMRLALQDISAILETCIRTSDVLYLLDKDDATWGLLL
                     LTDEPGGKLVADRIKSRIAEANTEEFAAKYRVKLELRIGTSQFDSEKVKTPLDFIDLA
                     TKELEYDV"
     gene            6225..7055
                     /locus_tag="U0290_001758"
     CDS             6225..7055
                     /locus_tag="U0290_001758"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2301799.1"
                     /translation="MNLEEIVDCMLLNENDKEIQRTQTEHRIKLVDFWQVKNGDRVLE
                     VGCGQGDTTAVLANAVGASGFVQGIDIAPRTYGAPFTIGDATDHLQKSKLGAQIDFKL
                     GTDILNGDITFPENAFDVAVLSHASWYFSSKSELTMMLELLSKWAKRVCYAEWDTRIT
                     DVKQTSHMLAVLTQSSYEAFKQDTQSNIRTFITPIDMQEIIQEHNWKMGAETSIFSEK
                     MQDSRWEIGYVKDFITKELEADLGLPEKFKAFLLSQSKLITLENSLPMASYCTSWQVK
                     "
     gene            7133..7402
                     /locus_tag="U0290_001759"
     CDS             7133..7402
                     /locus_tag="U0290_001759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464061.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ACT domain-containing protein"
                     /protein_id="HEM2301800.1"
                     /translation="MRAVLTVIGKDNVGIVAGVSNKLAELNINIVDVSQTIMDGYFTM
                     MMMCDISQITKEFDEVKAELAGKGEDLQVKIHIQREEIFNAMHKL"
     gene            7421..8776
                     /locus_tag="U0290_001760"
     CDS             7421..8776
                     /locus_tag="U0290_001760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PFL family protein"
                     /protein_id="HEM2301801.1"
                     /translation="METNQILETIRMIEEEKLDIRTITMGISLLDCMDGDGEVARKKI
                     YQKIVTKARNLVAVGEAIESEFGIPIINKRISVTPIAIIAGSSADTDYVEFAKTLDAA
                     AKEVGVNFIGGYSALVQKGYTKGDEILIRSIPQALAQTERVCSSVNVGSTRTGINMDA
                     VRQMGEVIKETADLTADTQGLGCAKLVVFANAVEDNPFMAGAFHGVGEADCVINVGVS
                     GPGVVKRAIEKVKGEPFDIVAETVKQTAFKITRMGQLVGQVASEKLGVPFGIVDLSLA
                     PTPAIGDSVAHILEEMGLEMVGTHGTTAALALLNDAVKKGGVMACGHVGGLSGAFIPV
                     SEDAGMIEAVQQGALNLEKLEAMTAICSVGLDMIAVPGDTTAETLAAMIADEAAIGVI
                     NNKTTAVRVIPASGTKVGDMVEFGGLLGTAPVMPVNGKSSVDFIARGGRIPAPIHSFK
                     N"
     gene            complement(8816..9784)
                     /locus_tag="U0290_001761"
     CDS             complement(8816..9784)
                     /locus_tag="U0290_001761"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2301802.1"
                     /translation="MANIQEIAKLAGVSSATVSRVINKRDYVSDETRKRVQTIIDQLD
                     YVPNINAVSLKKGATKLIGMVIPSFTDSLNVFLKSFTMIAQEHGYNVTLFMTRIDPDK
                     ELEALEMLRQKQIDALVLVIRSNDWKTIEHYTKYGPIVTWQRVESEKIPSVFMNQYDG
                     YTLALEHLYAKGYRKFVNVYGNTTGLNTQSRMLAFKDFCARYELDPHEFRQFYGQGSR
                     QDGEKIAHWFAETEHKPDAFLTPNDYFAAGLLTEARRLGYSVPEDFAICGFDNMEIAH
                     LLDITTIHYPVNLQAENAFTLIMNQLFGSNLPLLDLDFHLVERKTT"
     gene            9956..11278
                     /locus_tag="U0290_001762"
     CDS             9956..11278
                     /locus_tag="U0290_001762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="6-phospho-beta-glucosidase"
                     /protein_id="HEM2301803.1"
                     /translation="MKKGVKIVTIGGGSSYTPELVEGFIKRYHELPIRELWLVDIEAG
                     REKLEIVGNMAKRMVKAANIDCEVHLTLDRREALKDADFVTTQFRVGLLDARIKDERI
                     PLSHGIIGQETNGAGGMFKAFRTIPVILGIVEDMRELCPDAWLINFTNPAGMVTEAVL
                     RYGNWDKVIGLCNVPIGAVKSASDVLEKPEEDLFFKFAGINHLHWHRVFDKDGTELTE
                     KVIDGLYAPDANPGKVVENIKNMRFLYEQVKHLKMLPCPYHRYYYMTDAMLEEELASF
                     KNEGTRGEVVKKLEDSLFELYKDPNLDYKPEELSKRGGAHYSDAACEIINSIYNNKGT
                     VMVVSTRNNGAIDDVPYDSAVEITSVIRAHGAEPINFGKFPPAQRGLLQVMKSMEELT
                     IEAAVTGDYATALQAFTSNPLVPSGDLAKTILDEMLEAHKEFLPQFAK"
     gene            11382..12653
                     /locus_tag="U0290_001763"
     CDS             11382..12653
                     /locus_tag="U0290_001763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Zn-dependent hydrolase"
                     /protein_id="HEM2301804.1"
                     /translation="MQTNLERIKKHIEKLDTYTATPGQGTTRLTYSKEDLDARNYLKQ
                     EMAKVGLAVSEDAIGNIYGRLEGENPKLPAVIVGSHFDSVPNGGAFDGPAGVITGLEV
                     ATVFYEQQIKPHFPLEIIAMVEEEGARFGAGLLASRTITGKVTKEMLHEMKDIDGITA
                     AEAMAKVGFDANQVVTAIRTKESVKAFIELHIEQGPVLENANEDVALVDTVVGLTEIK
                     VTVKGQAGHAGTTPMLDRKDALITAVEILGQLPELAIQEGGGTVLTVGKLNVYPNGAN
                     VIPDKVVFTVDIRAKDEIHVQNTLAKTKEIIQSAEKNGITCEIEDMLYEPPTHLSKEI
                     HQALTESADQLGLKYRTMVSGAGHDAMIFASLTEVGLIFVPSHNGISHAPEEWTDYDK
                     LQKGIEVVLKTVKKWTEESANESENKTSSFK"
     gene            12619..13794
                     /locus_tag="U0290_001764"
     CDS             12619..13794
                     /locus_tag="U0290_001764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014600561.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amidohydrolase"
                     /protein_id="HEM2301805.1"
                     /translation="MNQKIKQAVLNNEEAMIAFRRDLHMHPELQWQEFRTTDKVAKEL
                     DKLGIPYRRTEPTGLIAELKGGKSGKTVALRADMDALPVQELNQDLPYKSTEDGKMHA
                     CGHDAHTAMLITAAKALVEIKDELPGTVRFIFQPSEEIAEGAKAMIAQGAMEGVDHVF
                     GIHIWSQTPSGKISCVVGSTFASADIIQIDFKGQGGHGAMPHDTIDAAVIASSFVMNL
                     QSIVSRETDPLDPVVVTIGKMDVGTRYNVIAENARLEGTLRCFNNITRAKVAKSIEHY
                     AKQTAAIYGGKAEMIYKQGTQPVINDEKSALLVQETITESFGEEMLYFERPTTGGEDF
                     SYFQDEAPGSFALVGCGNPEKDTEWAHHHGRFNIDESVMKNGAELYAQFAYNYLNQN"
     gene            complement(13842..14858)
                     /locus_tag="U0290_001765"
     CDS             complement(13842..14858)
                     /locus_tag="U0290_001765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tagatose-bisphosphate aldolase"
                     /protein_id="HEM2301806.1"
                     /translation="MVQITKGKFDGLQRLSNEKGVIAALAIDQRGSLKKMIQQAKGTE
                     NKKDVEDFKQLVSEELTPYASAILLDLEYGTPAIKARHEGSGLLTSYEKTGYDATTPG
                     KLPDLIEDLSALRIKENGGDAVKILVYYDPDEPAEINEIKYAFLERIGAECRAVDIPF
                     FLEPITYDATVTDSGSLEYAKLKPAKVKASIKEFSKPRYGVDVLKLEVPVNFKYVEGF
                     AEGEVAYTQDEAARHFEECSDLSPLPFIYLSAGVTSEMFHKTIQFANQHNVQYSGVLC
                     GRATWADGIEVYGKQGDDALREWLRTQGKENITSLDKLLDEGAVPWWTKYGSFEDVHV
                     VEKQ"
     gene            15095..>16211
                     /locus_tag="U0290_001766"
     CDS             15095..>16211
                     /locus_tag="U0290_001766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine hydrolase"
                     /protein_id="HEM2301807.1"
                     /translation="MNRRERRKHKRRKNMIIVLSTVFLLFIATSWMIYEFKSKQEQTV
                     SAPTKKKAATATNPPENAATNEPEETKEPEPVEEKPKETIVKNQEIDNYLQKIGFSGS
                     ALVVRDGETIIQKGYMYANRDEKVLNTPDTLFYIGSSQKAIIATALLQLEEKGKINTN
                     DPISKYIPDFPNGNKILVKNFMNHTSGIVGRPKLTSNMTPDQIIKAIEKRGIKSQPGK
                     WDYLDANYAVVGYLVEKVSGQPLATYLQENIFTPAGMKHTGYYQKDVDGGKNVSTGYK
                     IDENGVFQSPKLADLTKLYGAGDISMSTTDMYLFDKALMDKKLISEASLKKMFTSGSK
                     STYGMGFYVDPGSYNSHGVVTGWDVSNSVSHTGRTYVI"
BASE COUNT         5312 a         3073 c         3406 g         4420 t
ORIGIN      
        1 cggttttgag ttattacttg gaaaatccga aacaatttgg gaaaatgcta gatttatctg
       61 cgcaaaatag tttttcgatt cgtccatttg agatggggaa ttttgaaaag gcgacagggt
      121 ataaatttaa agagaaaacg cattttttct ccatctatag tgatgtaaaa gaaaaattgg
      181 ctccagcgaa atttacgttt ttaattttat gggcgcttgt ttttctaatt tgttatgggg
      241 tgagtgcttt taaacatttc cgggagaaaa atattcgtgg aatgctttta tttgatttag
      301 ttattttgct gattggttct gggtttgcgg tgattttagt gacgatagtt ggcgacgggg
      361 aagcggattt aacgaaacat aatttcttat ttaatgtgtg ctttgatttg acgatgttaa
      421 ttggagcggc ttctctgctg gaagtttaca tgaagaagag aggtgagcgg aatgcgtaaa
      481 aaactgattg taagtattct gctagcattc atgattttcg ttgttggcgg gcattccgca
      541 attgcaaaaa cggatgacgg tgtcgttgtt ttttatgata gtttggcgac aggtacagag
      601 aatgaaggca atatggatgc gctacttcga atgttaaata gcttgggcaa acgagtgacg
      661 atttattctt gggaggaaaa tcctgattta agtcaaacaa gcgaaattat tgtacttcaa
      721 aataaaaaag atggcttagc aagtgattgg acggaaaaat tagccaaaag caaagcgaaa
      781 atagcataca taggcggaaa tcccccaaca tttttaacgg ataaattgca actgaaaact
      841 aaagcaatta cagaggcttc tatcacaatt caaacgcaag ctggattgtc tggaaaacca
      901 cagctggtga acgaaacaaa tctaattact tcctataaag gaacaagctt tggtgaaatg
      961 gacgcagctg aaaatggaca agctgcatac ggcgttcaag caggaaatta cgcgtacgca
     1021 cctctttttc aagcagataa tacgagtgaa tttgctctaa tggacgtact caaagcatta
     1081 ttcgatatta aaacgaccac caaccaatat gcgtttatta cgggcgtaaa tccttttatt
     1141 gatttcgatt tgctcaaaaa aacggcagat actttttatg aaaaaggaat tccgtttatc
     1201 gtgagtgcgg ggcctgtttt ttacaatcaa gatttccaag cggcgaaaaa ttatgcggag
     1261 attttgcgct acgttcaagc aaaaaacggc acgattatga tgaacgttcc agcagtgacg
     1321 tacggagata gtccagcggg agaacttgaa aagattatgc aaaaatcggt acatttcttc
     1381 gcggaaaatg acgtcgcacc gcttggagtt acagcagaac tgtactggaa ctttgataaa
     1441 gtatatggcg tagaaggttt cgcaccgttt aataccggga ttttgctacc aaatcaaaaa
     1501 atcatccata cgacgaaagt aaataatggc agtgcatttg aaaagtctcc gtatagcgtg
     1561 gcgaacgatt tttatgcgac tacgactgaa gggagaacct tcccggtcga tatcgcgata
     1621 acctatccct tctttgataa cgagaaagaa ttaaaagcag ctgctgagga actagcgaac
     1681 gacaatatta gtgattttag attccaagat catggggtaa aaacaaataa ggatacgatt
     1741 gaatcgagtg caggctcact ttatatcaat aatcaatccg ttacgctcga tggcgattta
     1801 aactatatta aaacgaaaaa taaaacagtc aaacaggcgg gcagtttaga agggttcttc
     1861 ggctatcaaa acaccttttt cacgatagta attgtacttt cacttggcat tattggggtt
     1921 ttatttgtct ttggataccg gctttacatg aaaaaatata tgaaatgagg tgaaataaat
     1981 ggttattgca gattatttag cattattcgc ggtggtgtgt atttggggac ttttgctaat
     2041 taatatagtg ttaattgttg caggatatgt ttattatttg aaaaatgaag cgcgaaaagt
     2101 gcccgaaata ccagcggaag taccatttgt ttctgtcatg gtgccggccc ataatgaagg
     2161 gaaagtaatc gtgaaaacag ttgaatcact gcttgctttt gattatccgg tcgatcgtta
     2221 cgaaatcatt gtcattaatg ataattcttc agataatagc gcggaacttt tagccgccat
     2281 tcaagcaaaa aatccgacac gctttttaaa aattattaat accgataata ttacaggcgg
     2341 aaaaggaaaa tcgaatgcgc tcaatattgg gtttgcggaa agtcgtgggg aactggtggc
     2401 gatttatgat gctgataata caccggaacg gcaagcgcta agaatccttg ttggtgagat
     2461 tacaaatgat gcgaaacttg gtgcagtcat cggtaaattc agaacccgaa atcgaaatgc
     2521 aagctggtta acgcgattta tcaatattga aacgcttagt tttcagtgga tggctcaggc
     2581 cggcagatgg gcccttttca aactatgcac cattcctggt actaatttta ttgtgagaag
     2641 gtcgctccta gaagaaatcg ggggctggga tgtgaaagct gtcgcggaag ataccgagat
     2701 tagctttcgg atttacatga tgggttaccg aatcaaattc caagcgaagg ctgttacgtg
     2761 ggaacaagag ccgcaaacat taccagtttg gttcaaacag cgctcaagat gggcgaaagg
     2821 caatatttat gtaattttaa aaaacgttcc actccttttc aaacgagaag gtaggcgcgt
     2881 tcgctttgat attttatact ttttatcgat ttacttttta ttattaactt ccttgattgt
     2941 tagtgatgtt ttactcgtat tatatgcgct gggacttgta catacaacgc ttgctggcct
     3001 tagcggggcg ctttggttgc tagccatttt actttttgtc gcaggtactt ttattacact
     3061 caccacggaa aaaggcgaaa tcagtttttc aaatttgtta tttattatgt tgatgtatgt
     3121 gacgtattgc cagctttgga tggtggtcgc cgcatatgga ttctttattt tcttaaaaga
     3181 taccgtacta aaaagggaaa ccaaatggta taaaaccgag cgtttctaaa aaggagagtg
     3241 cctaatgaaa aaattaactg taatcgggct gcttatgttc gccgtactat ttctgtatag
     3301 gccagacgtt ctcgcagcag ataaaaacta tcaaacggtt tttggaacag ataaaaccgc
     3361 ccaaggaaaa ttcacaacca ccaaacaaaa cttcacggtg gaaaactact gggatgtatc
     3421 aaacgctaac gtaaagcttg tgtatacaat tacccaactg agcgaaaaag aagtttccac
     3481 gatgacactg aaaataaacg atgttgcgtt ctactctttt aaaccagata aagcagacaa
     3541 aggaacaaaa cagattgaaa tccaaattcc gaaagataag ttaaaaaaag gagtcaatgt
     3601 tctatccatc gaaagctttg tctacactga tttgcctgat ggtcgttgta cgattgacga
     3661 tacacctgcc aactggctgc aattcgataa aacaagcgca gtaaacgtat cttattccga
     3721 taaggctttc caaaaaacga ttgccgagtt tggcgagcgc ttcactggaa ttgatattgt
     3781 gaaaagtgaa caaggcgcag tagctgtctc aaacaaagcc ggcgatgccg aacttggcgc
     3841 agcacttgaa gggctttccg gattttctgc agcgaatacg ttagaagata aaaatatcgc
     3901 ttttggtcaa tacgaggaag caaaaacgcg tgacggtaaa aactatctcg tacttttttc
     3961 aagctatgac aatttaccaa atgatcttaa atcacaaata aaagatgata ataaattaga
     4021 aaaacaagca cttttccaag tagtgacagt cggaaatacg aatacactcg tggttacttc
     4081 taaatccaac gacgcactaa aaaaagctgg caaactaatc gccaaccaaa attacttaag
     4141 tcagcttgga acaaatacta aatggctaac aacagacgaa aaaatcgaca caccagcgac
     4201 taatgttgac aaaaatacga aactaacaac aactggcgat aaactaaaag gcattgggca
     4261 tatcacacaa gattacttta tcagcatgcc agccaaccgt agcgcatcaa caggaacaga
     4321 agtatcactt gattttaggt atgcgcaaaa cttggatttc gagcattcat tagtaacgat
     4381 tttagtgaac ggaaaaccaa tcggcagcca aaaacttacc gctaaaaaag ccaatggcga
     4441 caaattaacg ttccaaattc cgagcgattt aaacgtaaaa ggggattttt cagttaccgt
     4501 tgcctttgat ttagttttaa caaataacta ttgtggcttt attgcagatt ctgaaatccc
     4561 gtgggcgtat atcaccccag aatcaaaaat caatttaaac acaagcgaag aaacagactt
     4621 gctttttgaa caatatccgt acccatttat tgcaaatggt gactttaaca atgcagttgt
     4681 cgttgttcct gataaattaa cgacagaaga tacagattca ttagcaaata ttttcaatct
     4741 gttaggccgc ttccatgatg gaaatagggg agatttaacg gcggtacatg ccgccaactg
     4801 gaaaaaacca aaagaaggat cgaacattgt tgcagttggt acaatgaata ataatccagt
     4861 aattaaaaac gccaatgacg atctatattt tcagtacaac aaaacaggcg attacttcct
     4921 ttccaatgaa aaaatctcga ttgaaaaaaa ttacggcaaa caacttggta gtgtgcagtt
     4981 aattacatca gatggcgtcc caattctggc agttactggt ccaggtgcca aacaaacaga
     5041 actcggatcg gatttaatcg caacaaaagc gaacctagct aaaatttacg gagatggcgc
     5101 cattgttgat actgataaca cgatacattc ctaccgattc aaaaaagcag cagatacaca
     5161 ggaagaaagc tttgggtcaa aaatcagtaa taacaaagaa gtcactgtgt tcggagcatt
     5221 cgcgcttcta accgtcgtta tcttagttgt cgctgtccta ctaatcttgc gtaaatatcg
     5281 ccggagccgg aagtgaggga gaaataaaaa atgaaaaaaa taacgaataa cttatttgca
     5341 gatatcggct ttttattttt catcttgctt tgtttcatca caattggctt tatgatcaat
     5401 acgccggatg aatatttgcg aaacattatt ttattaaata tcaccttttt acttgtgatt
     5461 atcacctatt ttacgaactt aacgcttggt ttgattttaa atgtcctcta catttttatt
     5521 tatgcaactt atattattta tgaaattgtc gcaaatcaaa tcgcctatgg ttttggtagc
     5581 tacttctggc ttataatcac gccccttttc acagtagcta gtgcgatgtt tacaagaaat
     5641 acgtcaaggc ttcaagaaga gaacacgaaa atcaaacagc aaaatctata tttaggaacg
     5701 attgaccaag aaactttgct taaaaatatc gtttcattcc aaaatgacga gcgaattttt
     5761 tccagtattt cgcgccgtta tgatttacct ttatcactga tggttatcaa agtacgtcac
     5821 tggcgcgagt tgaaacgatt ccaaagcgaa gaagagatgc gcctagcgtt acaagatatt
     5881 tcagcgattt tagagacttg tattcgcacg agtgatgtcc tttacttatt agataaagat
     5941 gatgcgactt ggggactctt gttactaact gacgaaccgg gtgggaaatt agttgcggat
     6001 cgaattaaaa gccgtatagc tgaagccaac accgaagaat ttgccgcgaa gtaccgtgtg
     6061 aagctagaac ttcgaattgg aacaagccaa tttgatagcg aaaaagtcaa gacaccactt
     6121 gattttatcg atttagcaac aaaagaatta gaatatgacg tgtaaaatag agagttacct
     6181 tctataatta ggaggtaact ctcatttttg attggaggaa taccatgaac ttagaagaaa
     6241 tagtcgattg tatgctatta aacgaaaatg acaaagaaat tcagcggacc caaacagagc
     6301 accgcatcaa actagttgat ttttggcaag tgaaaaatgg ggaccgagtg ctggaggttg
     6361 gttgtgggca aggcgatacg acagccgtac ttgcgaatgc agttggtgct agtggctttg
     6421 tgcaaggtat tgatattgca ccgcggactt atggtgctcc gtttaccatt ggcgatgcga
     6481 cagaccattt gcagaaatca aagcttggtg cgcaaattga ttttaagcta gggacagata
     6541 ttttaaacgg tgatatcact tttccagaaa atgcttttga tgtagccgtt ttatcgcatg
     6601 cttcgtggta ttttagttcc aaaagtgagc tcacgatgat gctcgaatta ctaagcaagt
     6661 gggcgaaacg cgtttgttat gcggaatggg atacgagaat tacggatgta aaacaaacgt
     6721 cgcatatgtt agctgtgctc acccaatcat cttatgaagc tttcaaacaa gacacgcagt
     6781 ccaatatccg aacattcatt acaccaatag atatgcaaga aatcatccaa gagcataact
     6841 ggaaaatggg cgcggaaaca agtatcttct cagaaaaaat gcaagatagc cgatgggaaa
     6901 ttggttatgt aaaagatttt atcacaaaag aattagaagc agatttaggt ttgccagaaa
     6961 aatttaaagc atttttactc agtcaaagta aattaattac gcttgaaaat agtttgccaa
     7021 tggcgtcata ctgcacttct tggcaggtga agtaattttg ctttcttttt cacaagattt
     7081 agatttttta tgctataatg gaacgtatta acgaactaaa ggagtgttga atgtgagagc
     7141 tgtacttact gtaattggaa aagataatgt gggtattgtc gcaggtgtta gtaataaatt
     7201 agctgaactg aatatcaata ttgtggatgt atcccaaacg attatggatg gttattttac
     7261 gatgatgatg atgtgcgata ttagccaaat cacgaaagaa tttgatgaag taaaggcaga
     7321 attagccggt aaaggcgagg acctccaagt aaaaatacat attcagcggg aagaaatttt
     7381 caacgcaatg cacaaacttt aggatggggg cgatgctagt atggaaacaa atcaaatttt
     7441 agaaactata cgaatgattg aagaagaaaa attggacatc cggacgatta caatgggaat
     7501 ttctttgcta gattgtatgg acggcgacgg cgaagtggct cgaaagaaaa tctatcaaaa
     7561 aatcgttacc aaagcgcgta atttagttgc agttggtgaa gcgattgaat ctgagtttgg
     7621 cattccaatt attaataaac gaatttctgt cactccgatt gcgattatcg ctggatcaag
     7681 cgcagatact gactacgtag aatttgcgaa aacacttgat gctgctgcaa aagaggttgg
     7741 cgtgaatttt attgggggct attccgcact cgttcaaaaa ggctacacga aaggtgacga
     7801 aatcctgatt cgctcgattc cgcaagcact cgcacaaacg gaacgcgtat gctcatcggt
     7861 caatgttggc tcgacgcgaa cgggaatcaa tatggatgct gtccgccaaa tgggcgaggt
     7921 aatcaaagaa acggcagact taacagcaga tacgcaaggc ctaggttgcg cgaaactcgt
     7981 tgtatttgcc aatgctgtcg aggataatcc ttttatggcc ggagcattcc atggtgttgg
     8041 tgaagcggac tgcgttatca atgttggtgt cagcggccca ggtgtggtga aacgtgctat
     8101 tgaaaaagta aaaggcgaac cgtttgatat cgttgctgaa acagtcaaac aaacagcgtt
     8161 taaaatcact aggatgggtc aactcgttgg ccaagtcgct tccgaaaaac tcggcgttcc
     8221 ttttgggatt gtcgatttat cacttgcacc aactccagcg attggtgatt cggtcgcaca
     8281 cattttggaa gagatgggac tagaaatggt tggaacacat ggcacgacag ccgcactcgc
     8341 acttttaaat gacgcagtga aaaaaggcgg cgtaatggct tgtggacatg tcggtggttt
     8401 atcaggcgca ttcattcctg tttctgagga tgcgggtatg attgaagctg tgcagcaagg
     8461 ggcgctcaac ctcgaaaaat tagaagcaat gacagcaatt tgttcggttg gtctggatat
     8521 gattgccgta ccaggtgaca caactgccga aacattagca gcaatgattg cggatgaagc
     8581 ggctattggc gtcattaaca ataaaacaac tgctgtccga gtgattccag caagtggcac
     8641 caaagttggc gacatggtcg aattcggcgg cttacttggc acggcaccag taatgccagt
     8701 aaacggaaaa tcgtctgtgg acttcattgc tcgcggcggt cgaatcccag caccaattca
     8761 ttcttttaaa aactaacgaa aaaggtttcc tccaaatttg cgaggaaacc ttttattatg
     8821 tcgtttttcg ttcaactaaa tgaaaatcta aatcaagcag tggcaaattg ctaccaaata
     8881 attgattcat aatgagcgta aaagcatttt cagcttgcaa atttaccggg tagtgaatcg
     8941 ttgtgatatc aagcaaatgc gcgatttcca tattatcgaa cccacaaatc gcaaaatctt
     9001 ccgggacact gtaaccaagc cgtcttgctt ccgtcaaaag cccagccgca aaataatcat
     9061 tcggtgtcaa aaaggcgtca ggtttatgct ctgtttccgc aaaccaatgc gcaatctttt
     9121 ccccgtcttg ccgagaacct tgcccgtaaa actgtctaaa ctcatgcgga tcaagctcat
     9181 aacgcgcaca aaagtcttta aaagcaagca tgcgactttg cgtattgagc ccggtcgtat
     9241 tcccgtaaac attcacgaat tttcgatatc cttttgcata taaatgttct agtgcaagcg
     9301 tatatccatc atattggttc ataaatacag aagggatttt ttcactttcg acacgttgcc
     9361 aagtgacaat cgggccatat ttggtgtaat gttcaatcgt tttccaatca tttgaccgaa
     9421 tgaccaggac gagcgcatca atttgttttt ggcgcagcat ctctaaggcc tctagttctt
     9481 tatctggatc aatccgcgtc ataaacaatg tgacgttata accatgctct tgcgctatca
     9541 tcgtaaaact tttcaaaaat acattcagag aatctgtaaa gctaggaata accatgccaa
     9601 ttagcttcgt tgcccctttt ttcagagaca cggcgtttat attcggaaca taatctaact
     9661 gatcaattat tgtctgaaca cgttttctgg tttcatcgct tacatagtcg cgcttattaa
     9721 tcactcggga aaccgttgct gatgaaacac ccgctagttt cgcgatttct tgtatatttg
     9781 ccaattaaaa aacacctcga tttctcgtag ctctctaatt agtataccaa aaaatcccgc
     9841 caaatagcca gtttggataa atttaaaata agtgcttgac ctgtaatgca ttacatgaat
     9901 tatgatgaat gagaagaaaa gaaaacgctt taaaattcta ggaggtaagt atattatgaa
     9961 aaaaggtgta aaaatcgtta caattggtgg gggttccagt tacacaccag aacttgttga
    10021 aggatttatt aaacgctatc atgaacttcc aatcagagaa ctttggctag tagatattga
    10081 agctggtcgt gaaaaattag aaatcgttgg taatatggca aaacgtatgg tcaaagcagc
    10141 aaacattgac tgcgaagtac atttaacact tgaccgtcgt gaagctctaa aagatgcaga
    10201 ttttgttaca acacaatttc gtgttggttt attagacgct cgtattaaag atgaaagaat
    10261 tcctcttagc cacggcatca tcggtcaaga aacaaacgga gcgggcggaa tgtttaaagc
    10321 tttccgtacg attcctgtca ttcttggtat cgttgaagat atgcgcgaac tttgcccaga
    10381 tgcttggtta atcaacttca caaacccagc aggtatggta acagaagccg ttcttcgtta
    10441 cggcaactgg gataaagtta tcggtctttg taacgtgcca atcggagcag tgaaaagcgc
    10501 atccgacgtt ttagaaaaac cagaagaaga cttattcttc aaatttgctg gaatcaacca
    10561 cttgcactgg caccgcgtat tcgacaaaga tggtaccgaa ttaacagaaa aagttatcga
    10621 cggcctttat gcaccagatg ctaacccagg aaaagtcgtt gaaaacatta aaaacatgcg
    10681 cttcttatat gagcaagtta aacatctaaa aatgcttcct tgtccatatc atcgttacta
    10741 ctacatgacg gatgcaatgc ttgaagaaga actggcatct ttcaaaaacg aaggtactcg
    10801 cggagaagtc gtgaaaaaac tagaagacag cttattcgaa ttatataaag acccaaatct
    10861 tgattacaaa ccagaagaat tatccaaacg aggcggcgca cattacagtg atgcagcatg
    10921 tgaaatcatc aattccattt acaacaacaa aggtaccgta atggtagtat ctactcgtaa
    10981 taacggcgca attgatgacg ttccttacga tagtgctgta gaaatcacaa gtgttatccg
    11041 tgcgcatggc gcagaaccaa tcaacttcgg taaattccca ccagcacaac gcggcttact
    11101 acaagtaatg aaatccatgg aagaattgac tatcgaagca gcagtaacag gcgattacgc
    11161 aactgcacta caagcattca cttctaaccc actcgttcca agcggcgact tagcaaaaac
    11221 aattctagat gaaatgctag aagcacacaa agagttttta ccacaattcg ctaaataatt
    11281 cgcaagtgat ccctagaaaa tagggatcac tttttttgtg agttgtttta gcgagcattt
    11341 tttcaagttt cctgtaaaat agaaaaaagg aggtgtgctt gatgcaaaca aatcttgaaa
    11401 gaataaaaaa acacatagaa aaattagata cttatacagc aactccgggt cagggaacaa
    11461 ctcggcttac atatagcaaa gaagacctcg acgcgcgcaa ctatttaaaa caagaaatgg
    11521 ctaaagtagg ccttgctgtt tcagaagatg cgattggaaa tatctacgga cgactagaag
    11581 gcgaaaatcc aaagttacca gcagtaattg tcggctctca ttttgactct gtaccaaatg
    11641 gtggtgcttt tgatggacca gctggcgtca ttactggact tgaagtagcc actgttttct
    11701 atgaacaaca aattaaacca cattttccgc ttgaaattat tgcgatggtg gaagaagaag
    11761 gcgctcgttt tggcgctggc ctccttgctt cacgtacaat tactggcaaa gttaccaaag
    11821 aaatgctcca tgaaatgaaa gatatagatg gaattacagc cgcagaagcc atggcaaaag
    11881 taggatttga tgcaaatcaa gtagttacag ctatccgcac gaaagaatcc gttaaagcat
    11941 ttatcgaact acacattgag caaggaccag tcctagaaaa tgccaatgaa gatgtggcgc
    12001 tagtagatac agtagtcggt ttaacagaaa taaaagtaac agtaaaagga caagccggcc
    12061 atgcaggcac aaccccaatg cttgaccgaa aagatgcgct gatcacagct gtcgaaattt
    12121 taggtcaact accagaacta gctatccaag aaggcggcgg aactgtatta acagtgggca
    12181 aactcaacgt ctatccaaat ggcgcaaacg ttattccaga taaagtcgtt tttaccgtag
    12241 atatccgagc aaaagacgaa attcacgtcc aaaatacatt agcaaaaaca aaagaaatta
    12301 tccaatccgc agagaaaaac ggcatcactt gcgaaataga agatatgcta tacgaaccgc
    12361 cgacccattt atcaaaagag attcatcaag cattgactga aagtgccgac caactcggct
    12421 taaaataccg aacaatggtt agcggggccg ggcacgacgc gatgattttc gctagtttaa
    12481 ccgaagtggg cttgattttt gttcctagcc acaacggcat aagtcatgcc ccagaagaat
    12541 ggaccgatta cgacaagcta caaaaaggaa tcgaagtcgt actcaagaca gtaaaaaaat
    12601 ggacggagga aagcgcgaat gaatcagaaa ataaaacaag cagttttaaa taatgaagaa
    12661 gcaatgattg ccttccgccg tgatttgcac atgcatcccg aactccaatg gcaggaattt
    12721 agaactaccg acaaagttgc caaagaattg gacaaactgg gcattcctta ccgccgcacg
    12781 gaaccaaccg gattaatcgc ggaactcaaa ggcgggaaat cagggaaaac agttgccttg
    12841 cgtgccgata tggacgcact cccagtccaa gaactaaacc aagacctccc atataaatcc
    12901 acagaagacg gcaaaatgca tgcctgtggt catgatgctc atacagcgat gctaataacc
    12961 gcggcaaaag cactcgtaga aataaaagac gaactacccg gaacagtgcg cttcattttt
    13021 caaccttcag aagaaattgc agagggtgcg aaagctatga tagcccaagg agcgatggaa
    13081 ggcgtggacc acgtgtttgg gattcatatc tggtcccaaa ctccaagtgg aaagatatcg
    13141 tgcgtagtcg gctccacatt cgcctccgca gatattatcc aaatcgactt caaaggacaa
    13201 ggtggtcacg gagcaatgcc gcatgacaca atcgacgctg ctgtaattgc ttcctcattc
    13261 gttatgaacc tccaatccat cgtatcacgc gaaacagatc cacttgatcc agtcgtagta
    13321 actatcggca aaatggatgt cggcactcgc tacaatgtta tcgcagagaa tgcccgtttg
    13381 gaaggaacgc ttcgttgctt caacaacata acacgcgcca aagtcgcaaa atcaattgaa
    13441 cactacgcca aacaaaccgc cgctatctac ggtggcaagg cagaaatgat atacaaacaa
    13501 ggcacacaac cagtaatcaa cgacgaaaaa agcgcactac tcgtccaaga aacaatcaca
    13561 gaatcattcg gcgaagagat gctttacttt gaacgtccaa ccacgggcgg cgaagacttc
    13621 agctattttc aagatgaagc tcccggaagt ttcgcactcg ttggctgcgg caatccagaa
    13681 aaagacaccg aatgggcgca tcaccatggc cgatttaata ttgacgaaag tgtcatgaaa
    13741 aatggcgccg agctatatgc ccagtttgcg tataattatt taaatcaaaa ttaataaaaa
    13801 aagcctccag ctaattcaat taactggagg cttttcgcat gctattgttt ttctactaca
    13861 tgtacgtctt caaaagaacc gtattttgtc caccaaggaa cggcaccttc atcaagcaat
    13921 ttatcaagag aagtaatgtt ttctttccct tgcgtacgaa gccattcgcg taaagcgtca
    13981 tcgccttgtt tgccgtacac ttcaatacca tcagcccaag ttgcacgacc acaaagaacg
    14041 ccgctatact gcacgttatg ttggttcgca aattggattg ttttgtggaa catttcagaa
    14101 gttacaccag cactaagata aataaatgga agtgggctta agtcagagca ttcttcaaaa
    14161 tgacgagctg cttcgtcttg cgtataagcg acttcacctt ccgcaaaacc ttccacatat
    14221 ttaaagttaa ctggaacttc aagtttaagt acatctacac cgtaacgagg tttagagaat
    14281 tctttaattg aagcttttac ttttgctggt ttcaatttag catattctaa agaaccagaa
    14341 tcagtaactg ttgcatcata agtaattggc tctaagaaaa atggaatatc aactgcgcga
    14401 cattcagcac cgattctttc taaaaaggca tatttgattt cattaatttc agctggctca
    14461 tctggatcat aataaacgag aattttaaca gcatctccgc cattttcttt aatacgaagt
    14521 gccgataaat cttcaattaa atcaggaagt ttaccaggag ttgttgcgtc atatcctgtt
    14581 ttttcataag aagttaaaag tccgctacct tcgtggcgag ctttgattgc tggagtacca
    14641 tattctaaat caagcaaaat cgcagaagca taaggtgtaa gttcttcaga aacaagttgt
    14701 ttgaagtctt ccacatcttt tttgttttct gttccttttg cttgttggat catttttttg
    14761 agtgagccac gttggtcaat ggcaagcgct gcaatgacac ctttttcgtt ggagagtctt
    14821 tgtaaaccat caaatttacc ttttgttatt tgtaccattt ttatctagtc tcctttatag
    14881 caatttgtcg ttgcttaatc aatttatcct tccttattat accactgaaa agttttttta
    14941 aaacataggt atatttccgt attgatttat ctgaagtaat aaattacgat atatgtggag
    15001 tgttaggtat tgatagaaat ttgggatatt ttctattaat acattctctt ttgggaaagt
    15061 catttaacga ttagactaga ccaggagtga tgaaatgaat cgacgcgaaa gacgtaaaca
    15121 caaaagacgc aagaacatga ttatcgtgtt gagtactgta tttctactgt ttattgccac
    15181 aagttggatg atatacgaat tcaaaagtaa acaagagcaa acagtatccg cacctactaa
    15241 gaagaaagca gcaaccgcaa caaacccacc ggaaaatgca gcaactaatg agcctgaaga
    15301 aacgaaagag cctgaaccag tagaagaaaa gccaaaggaa acaattgtaa aaaatcaaga
    15361 aattgataac tatttacaaa aaattggttt tagtggttcg gcactggttg ttcgcgatgg
    15421 agaaactatc atacaaaaag ggtatatgta tgcaaatcgt gatgaaaaag tattgaatac
    15481 accagatact ttgttttata ttggctcttc tcaaaaagca atcatagcaa cggcactttt
    15541 acaattagaa gaaaaaggta aaataaatac gaatgatcca atttcgaagt atatacctga
    15601 ctttcctaat ggtaataaga ttttagtgaa gaactttatg aatcatacat ctggtatagt
    15661 tggacgacca aaattaacga gtaatatgac accggatcaa attattaaag ctattgaaaa
    15721 gcgaggaatt aaatcacaac ctgggaaatg ggattatttg gatgctaatt atgctgtagt
    15781 aggttatctt gtagaaaaag ttagtgggca acctttagct acctatcttc aagaaaatat
    15841 atttacccct gcaggaatga agcatacagg atactatcaa aaagatgttg atgggggaaa
    15901 aaacgtatca acaggctata aaattgatga aaatggagtc tttcaaagtc caaagcttgc
    15961 agacttaacg aaattatatg gtgcagggga cattagtatg tctacaacgg atatgtattt
    16021 gtttgacaaa gcattgatgg ataaaaaatt gatttctgaa gcaagtttga aaaaaatgtt
    16081 cacatcagga agcaaatcaa cttatggaat gggattctat gtggatccag gtagttataa
    16141 tagtcacgga gttgtgaccg gttgggacgt atctaatagt gtcagtcata caggaagaac
    16201 ttatgttata t
//
LOCUS       DASDYO010000067        16116 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.067, whole genome shotgun sequence.
ACCESSION   DASDYO010000067 DASDYO010000000
VERSION     DASDYO010000067.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 16116)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 16116)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..16116
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.067"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            185..736
                     /gene="pyrR"
                     /locus_tag="U0290_001767"
     CDS             185..736
                     /gene="pyrR"
                     /locus_tag="U0290_001767"
                     /EC_number="2.4.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465365.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional pyr operon transcriptional
                     regulator/uracil phosphoribosyltransferase PyrR"
                     /protein_id="HEM2301808.1"
                     /translation="MQKQVVVMDEAAIKRALTRVSYEIIERNKGTKNLALVGIKTRGI
                     YLAERLHKRILEIEGIDVPVGDIDITLYRDDLSFKDDKTREPAVHGTNIPFDINGKKV
                     VLVDDVLYTGRTVRAAMDALMDVGRPAQIHLAVLADRGHRELPIRADYVGKNIPTSGN
                     ERVEVRLTDVDNEEDAVIINKNE"
     gene            865..2151
                     /locus_tag="U0290_001768"
     CDS             865..2151
                     /locus_tag="U0290_001768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uracil permease"
                     /protein_id="HEM2301809.1"
                     /translation="MTETTETVTKPVLDIHERPSFNKWIILSIQHLFTMFGSTIFVPS
                     VTGLSPGVALVSSGLGTLAYLGITRGKIPAYLGSSFTFIAPITALLAAKSGGGPGAVM
                     VGTFSVGVVYAIVSLIVYYAGVDWIQKVLPPIVVGPVIMVIGLSLAPSAAAMAMGTNN
                     GKYSLETLAVAVITLLATIIAMMFFKGFMGLIPILFGFTVGYLTSMAFGMVDYTLIKN
                     ASFFQIPDFSIPFVNIDPVITVTVILSMAPLAFVTMAEHMGHQLLLNRITNKNFFKDP
                     GLHRSLLADGTASIIASFIGGPPVTTYGENIGVLAITKVYSVFVIGGAAVFAILFGFI
                     GYINAVITSVPTAVLGGISLLLFGVIATSGLRMMIENKIDLSVNRNMIIASVVLVVGI
                     GGLFIKAGTFELSGMALAAVIGIILNLVLPAEHRSA"
     gene            2232..3143
                     /locus_tag="U0290_001769"
     CDS             2232..3143
                     /locus_tag="U0290_001769"
                     /EC_number="2.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aspartate carbamoyltransferase catalytic
                     subunit"
                     /protein_id="HEM2301810.1"
                     /translation="MKNLLSMEALTVHEIEHLLEQAAQFKRGKKATFNEQTFAVNMFF
                     EPSTRTHTSFEVAEKKLGVEVVSFDAASSSMTKGETLYDTLLTMQAVGVNVAVIRHSE
                     ENYYAGLEKLDIAIVNGGDGCGEHPSQSLLDLFTIKEQFGTFQGLKVAIAGDIRHSRV
                     ANSNMKVLKRLGAELFFSGPREWFDESYLAYGTYLSVDEIVEKVDVLMLLRVQHERHS
                     GTDEFTKESYHEKFGLTENRAKQLKEDAIIMHPSPVNRDVEIADSLVESEKSRIVTQM
                     TNGVFIRMAILEAILKEQEMRAKLCTY"
     gene            3131..4411
                     /locus_tag="U0290_001770"
     CDS             3131..4411
                     /locus_tag="U0290_001770"
                     /EC_number="3.5.2.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotase"
                     /protein_id="HEM2301811.1"
                     /translation="MYVLKNGQVLNASGELENKDVLIQNGKVNLIADSIEVTSGEEFD
                     ATGKLIAPGFIDVHVHLREPGGEHKETILTGTQAAARGGYTTICSMPNTKPVPDSKEV
                     MESLQAKIKETAKVRVLPYASITTSLGTDELVDFEALKEAGAFAFTDDGVGVQLAGTM
                     YEAMKRAAALDMAIVAHCEDNSLIYGGVVHDGIFAEKEGLKGIPNIAESVQIARDVLL
                     AEAAGCHYHVCHISTKESVRVVRDAKRAGIRVTAEVSPHHLILDEEAIPGNDGNWKMN
                     PPLRSKEDRAALLEGLLDGTIDFIATDHAPHAAEEKNVPMEQAAFGIVGLETAFPLLY
                     THFVKTNEWTLKQLIDWMTVKPAECFKLPYGKLEEGSVADIVVLDLEKEANIDPATFY
                     SKGKNTPFVGETCIGWPVATFSEGTLVYNEGEIK"
     gene            4408..5499
                     /gene="carA"
                     /locus_tag="U0290_001771"
     CDS             4408..5499
                     /gene="carA"
                     /locus_tag="U0290_001771"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing carbamoyl-phosphate
                     synthase small subunit"
                     /protein_id="HEM2301812.1"
                     /translation="MTKRILMLEDGNYFIGDAIGSEKETIGEVVFNTGMTGYQETITD
                     PSYYGQIITFTYPLVGNYGVNRDDFESINPAVKGVVVREAAEFPSNWRNQITLDDFLK
                     EKGIPGIAGIDTRKLTKLIRKEGTLKGILAAETANKEELLHHLRSVRLPVDQVHEVSS
                     AKAFASPGDGKRVVLVDYGVKSSILRELNKRNCYVTVVPYNTTAEEILAMHPDGVMLS
                     NGPGDPKDVPEALEMIRGIQGKLPLFGICLGHQLFALANGADTFKLKFGHRGANHPVK
                     ELATGRVDFTAQNHGYAVEKDSLIGTDLKVTHIELNDETVEGLAHKEYPAYTVQYHPE
                     ANPGPSDVNYLFDEFMEMMNGKEEGELHA"
     gene            5492..8704
                     /gene="carB"
                     /locus_tag="U0290_001772"
     CDS             5492..8704
                     /gene="carB"
                     /locus_tag="U0290_001772"
                     /EC_number="6.3.5.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbamoyl-phosphate synthase large subunit"
                     /protein_id="HEM2301813.1"
                     /translation="MPKRDDIKTILVIGSGPIVIGQAAEFDYAGTQACLSLKEEGYRV
                     VLVNSNPATIMTDAEMADKVYIEPITLDFVSRIIRKERPDAILPTLGGQTGLNMAMEL
                     SAAGILDECNVEVLGTDLTAIKKAEDREAFRDLMNELGEPVPESDIIHNLDEAYTFVE
                     RIGYPVIVRPAYTLGGSGGGICHNEQELIETVTSGLKLSPVTQCLLEKSIAGFKEVEY
                     EVMRDANNNAMVVCNMENIDPVGIHTGDSIVVAPSQTLSDREYQLLRDVSLKIIRALE
                     IEGGCNVQLALDPDSYNYYVIEVNPRVSRSSALASKATGYPIAKLAAKIAVGLTLDEV
                     RNPVTGTTFAHFEPTLDYVVAKIPRFAFDKFEQADRRLGTQMKATGEVMAIGRSWEEA
                     LLKAVRSLEIGADHLLLEEAENADEATLERKICFPEDDRLFFLAAALRRGQTIEQLHA
                     KTKIDLFFLYKLSKTIELENRIKENPQNQEILAEAKRAGFSDAFLATCWNVDEQAIYD
                     LRKAQNLFPVYKMVDTCAAEFESTTPYFYSTYEEENESTRSAKESVIVLGSGPIRIGQ
                     GVEFDYATVHSVWAIQQAGYEAIIINNNPETVSTDFSISDKLYFEPLTLEDVMHVIEI
                     EQPLGVVVQFGGQTAINLADGLAKRGVKILGTSLEDTDRAENRDAFEKALEILQIPQP
                     AGKTATSVEEAINVATDIGYPVLVRPSYVLGGRAMEIVESEEALKHYMTNAVKVNPKH
                     PVLVDRYVSGQEVEVDAISDGENVLIPGIMEHIERAGVHSGDSIAVYPAQRLSSQVKN
                     TIVDYTTRLATGLNIIGMLNIQYVVDGEEVFVIEVNPRSSRTAPFLSKITEIPMANVA
                     TRVILGENLIDLGYTPGLAPEKQEIFVKVPVFSFAKLRSVDTSLGPEMKSTGEVMGKD
                     VTLEKALYKGFVASGTTMHDYGTVLLTVADRDKEEAVELAKRFNRIGFTIMATKGTAS
                     TLEEADIPVSQVKKIGENQETLIDYIRNGQVTLVVNTLTTGKRPERDGFQIRRESVEN
                     GIPVCTSLDTAEAILRVLESRSFELESMNTSEVKQPKARV"
     gene            8727..9491
                     /locus_tag="U0290_001773"
     CDS             8727..9491
                     /locus_tag="U0290_001773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase electron transfer
                     subunit"
                     /protein_id="HEM2301814.1"
                     /translation="MLQTEMKVIQQTEIADKVYELILTGERVADMSPGQFLMLKPSRS
                     DLLMRRPISICSYDKTAKTCILLYRIEGDGTRDFSKLSEGDTIDVLGPLGKGFDIDQT
                     PAPKTALLIGGGIGVPPMYQLGKELAGKGVQVTFVNGFQSAKDSFYEKEMNAYGTVHI
                     ATVDGSLGTQGFVTDITNNFPEEPDVIYSCGPKAMLQAVKASFPETKTYLSLEERMAC
                     GIGACYACVCPKADDAKKQFKVCEDGPVFRADEVSL"
     gene            9488..10402
                     /locus_tag="U0290_001774"
     CDS             9488..10402
                     /locus_tag="U0290_001774"
                     /EC_number="1.3.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465358.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroorotate dehydrogenase"
                     /protein_id="HEM2301815.1"
                     /translation="MNRLAVEIPGLSLKNPIMPASGCFGFGQEYSKYYDLNELGAIMA
                     KAVTPEPRLGNPTPRVAETASGMLNAIGLQNPGLEHVLAHELPFLEQFETPIIANVAG
                     ATEDDYVQVCARIGESKAVKAIELNISCPNVKHGGIAFGTDPDVAHRLTKAVKNVATV
                     PVYVKLSPNVADIVSIAQAIEAAGADGLTMINTLLGMRIDLKTRKPIIANGTGGLSGP
                     AIKPVAIRMIHQVREVSNIPIIGMGGVQTVDDVLEFLIAGADAVAVGTMNFTDPFICP
                     KLISELPKRMDELGISSLQELKKERANQ"
     gene            10399..11100
                     /gene="pyrF"
                     /locus_tag="U0290_001775"
     CDS             10399..11100
                     /gene="pyrF"
                     /locus_tag="U0290_001775"
                     /EC_number="4.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465357.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotidine-5'-phosphate decarboxylase"
                     /protein_id="HEM2301816.1"
                     /translation="MNKPIIALDFQTYEEVETFLAKFSGETLSVKVGMELFYSNGPII
                     VEKIKQQHHEIFLDLKLHDIPNTVKSAMIGLAKLGVDMVNVHAAGGKKMMEAAREGLE
                     IGSSSGKRPKIIAVTQLTSTSETDMQTEQLIKTSLLESVMHYSNLSKQAGLDGVVCSA
                     LEAEDIKQQNGADFLRVTPGIRLASDAADDQIRVVTPEKARLIGSSNIVVGRSITRAN
                     DPVEAYNQVLKEWNA"
     gene            11097..11726
                     /locus_tag="U0290_001776"
     CDS             11097..11726
                     /locus_tag="U0290_001776"
                     /EC_number="2.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465356.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="orotate phosphoribosyltransferase"
                     /protein_id="HEM2301817.1"
                     /translation="MSIEKQVAEQLLEIKAVFLKPNEPFTWASGIKSPIYCDNRLTLG
                     FPKVRQFIAKSLAEKIKQTFGEVDVVAGTATAGIPHAAWVSDLLDLPMVYVRSKAKEH
                     GKGNQIEGPISKGQKVVVIEDLISTGGSSLKAVEALEEAGAEVVGIAAIFTYGLAKGK
                     QLLEESGTKLVTLTNYDELIEVALNENYVTGEDMETLKEWKKNPENWGK"
     gene            complement(11766..12365)
                     /locus_tag="U0290_001777"
     CDS             complement(11766..12365)
                     /locus_tag="U0290_001777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465355.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="short chain dehydrogenase"
                     /protein_id="HEM2301818.1"
                     /translation="MKILLIGASGTLGSAVKERLEKKAEVITAGRHSGDVTVDITSVD
                     SIKKMYEQVGKVDAIVSATGSATFSPLTELTPEKNAVTISSKLGGQINLVLLGINSLN
                     DNGSFTLTTGIMMEDPIVQGASAAMANGAVTAFAKSAAIEMPRGIRINTVSPNILEES
                     WDKLESFFQGFVPVPAAKVARAFEKSVFGAQTGESYKVY"
     gene            complement(12453..14165)
                     /gene="fbpA"
                     /locus_tag="U0290_001778"
     CDS             complement(12453..14165)
                     /gene="fbpA"
                     /locus_tag="U0290_001778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465354.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rqc2 family fibronectin-binding protein FbpA"
                     /protein_id="HEM2301819.1"
                     /translation="MAFDAMFLKAMTEELAEHGESGRIMKIHQPFSHELVLYIRKNRE
                     NKRLLISSHPSYARIQWTDDIPENPATPPMFCMLLRKYLEGAIIESITQLPNERILQF
                     SIRGKDDIGENRFCDLFVEIMGRHSNITLVDRAKNVIVDCIKHVSPAQNSYRTLLPGA
                     TYVLPPATDKLHPFEVTSEQILDRLDFSAGRMDKQLVQNFAGFSPLLAREIVFRAGNL
                     TADSLVAAFFEVIGLVNEHLGHAAVPNEWRIQNKEDYYFFPLRHVDAETTEFANLSTL
                     LDHFYIGKARRDRVHQFAHDLEKLLSNELARSRLKIEKLENTLLETEKADVYRIQGEL
                     LTANLHLMERGMEEITVENFYDDMKKMTIALDTRKTPSANAQSYFSRYQKLRNAVEVV
                     KEQIALTKEEITYLESVESQLETSGPQDVEEIRQELAEQGYLRYKQKKGSRKKATLPA
                     PEKYTSSTGLTILVGKNNKQNDYLTNKLARNNEYWFHVKDLPGSHVVIQSNDPDETSI
                     TEAAMIAAYYSKARLSATVPVDGTLVKHVKKPNGAKPGYVIYDNQTTYFVTPDEKLVL
                     ELKN"
     gene            14322..15197
                     /locus_tag="U0290_001779"
     CDS             14322..15197
                     /locus_tag="U0290_001779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465353.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YicC family protein"
                     /protein_id="HEM2301820.1"
                     /translation="MVKSMTGFGRATKEFEAFKVTIELKAVNHRYSEFLFRMPKQLAY
                     LEGKLKKIISKQIKRGRIEVFFSITGEQITKRELHIDWDLADSYYRFIKQASARYELQ
                     ELPTMADLLQEQAYLSIEEEVEASSELERLVLETLARATERLDEMRSMEGAELLLYFK
                     QHLTALEKSLEIIQAEIPNTEKHYQEKIETRLQNVVGDQFDPSIVLTEVAMLLEKADI
                     NEEVERTKSHLKQFYGIILLEEPIGRKLDFLIQEMNREVNTIGSKASSLKITEQVVEM
                     KTTLEKIREQVQNVE"
     gene            15216..15833
                     /gene="gmk"
                     /locus_tag="U0290_001780"
     CDS             15216..15833
                     /gene="gmk"
                     /locus_tag="U0290_001780"
                     /EC_number="2.7.4.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465352.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="guanylate kinase"
                     /protein_id="HEM2301821.1"
                     /translation="MTERGLLIVLSGPSGVGKGTVREAVFKDPETSFDYSISMTTRLP
                     REGEQDGVDYYFRSREVFEQAIKDGKMLEYAEYVGNYYGTPLEYVEEKLAAGVDIFLE
                     IEVQGAMQVRKAMPEGIFIFLTPPDLSELKNRIIGRGTESMEVVEERMETAKKEIEMM
                     ASYDYAVVNDVVANAVQKIKGIVETEHLKTERVIHRYKKMLEGLQ"
     gene            15833..16036
                     /locus_tag="U0290_001781"
     CDS             15833..16036
                     /locus_tag="U0290_001781"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465351.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit omega"
                     /protein_id="HEM2301822.1"
                     /translation="MLYPSIDNLLLKIDSKYSLVTVAAKRARYMQLENDKGVLPSYQS
                     DKFVGKALEEIHAGKLVLQNDDK"
BASE COUNT         5088 a         3049 c         3665 g         4314 t
ORIGIN      
        1 ttttttttga ttgacaagga gagttctatc agttaagata agtctaatga aataaagtcc
       61 tttaacatag tccagagagg ctaagaaggt gacgataatt tgacgggtta attgtatact
      121 cgtacgcgtt cccttgctta cactggcaga gggttatttt tttgcacaaa aggagagatt
      181 tcggatgcaa aaacaagtag ttgtcatgga cgaggcggca atcaaacgtg cgctcactcg
      241 agtaagttac gaaatcatcg agcggaataa aggcacgaag aatttagcgc ttgtcggtat
      301 taagacgcgt ggtatctatc ttgcagagcg tttgcataag cgtatacttg aaattgaggg
      361 tattgatgtt ccagttggag atattgatat tacactttac cgagatgatt tatctttcaa
      421 agatgataag actcgcgaac ccgctgtaca tgggacgaac attccattcg atattaatgg
      481 aaaaaaagtc gttcttgtag atgatgtgct ttatacaggt cgaactgtgc gtgccgcaat
      541 ggacgcatta atggatgtag gtagacctgc gcaaattcac cttgcagtgc ttgctgatcg
      601 gggccataga gagctaccga ttagagcaga ttatgtaggg aaaaacattc cgacatcagg
      661 aaacgaacga gtagaagttc gcctaaccga tgtggacaac gaagaagatg cggttattat
      721 taacaaaaat gaataacaat gtaacacttt tttaaaagca gtcctgtgag gctgacaaag
      781 agtgattaat ttctataggg gattattcta tactctttgt cgacacagac aaggggtatt
      841 ttttatgaag aaagagggaa gaaaatgaca gaaacgacag aaacagtgac aaaaccagta
      901 ctagatatac acgaaagacc aagcttcaat aaatggatta ttcttagcat ccagcacctt
      961 ttcaccatgt ttggctctac tatctttgtg ccaagtgtga cagggttaag tccgggagtg
     1021 gcgcttgtat ctagcggact cgggacactt gcttatctag gaattactcg cgggaaaatc
     1081 cccgcatatc taggttcttc ctttaccttt attgcaccaa ttactgcact acttgcagcc
     1141 aaatctggcg gaggtccggg cgcagttatg gtcggaacgt tctccgtcgg tgtagtatat
     1201 gcgattgttt ctctaattgt ttactacgct ggtgttgact ggattcaaaa ggttttacca
     1261 ccaattgttg ttgggccagt aatcatggtt atcggtttgt cgcttgctcc aagtgcagca
     1321 gcgatggcga tgggaacaaa caatggtaaa tacagtttag aaactttggc agtagcagta
     1381 attacgctcc ttgcaaccat aatcgcaatg atgtttttca aaggatttat gggcttgatt
     1441 ccaattttgt tcggcttcac agtcggttac ttaacaagta tggcttttgg gatggtagat
     1501 tacacgttaa tcaaaaatgc ctctttcttc caaattccag atttcagcat tccatttgta
     1561 aatatcgacc cagtaattac cgtgacggtc attctaagta tggcgccact tgcgtttgtc
     1621 acaatggcgg aacatatggg gcatcaatta ctacttaatc gaattacgaa taaaaacttc
     1681 tttaaagacc caggacttca tcgttcctta cttgcagatg gtacggcttc gattatcgca
     1741 tcgttcatcg gcggaccacc tgtaacgact tacggtgaaa acattggcgt tcttgcaatt
     1801 acaaaagtat atagcgtgtt tgttatcgga ggagcggcag ttttcgcaat cctcttcgga
     1861 tttatcggtt acatcaatgc agttatcacc tcggttccta cagcagttct aggcggcatt
     1921 tccctgttac tctttggggt tattgcaacg agtggacttc gaatgatgat tgaaaataaa
     1981 attgatttaa gtgttaatcg taatatgatt attgcttcgg ttgtactagt agtcggaatt
     2041 ggcggcttat tcattaaagc tggaacgttc gagctatctg gtatggcgct cgcggcagtt
     2101 attgggatta tcttaaactt agtattacca gccgagcaca gatcagcata acacatgaca
     2161 aaaaaacctc tgcagacaaa aaatttacag aggtttttct ataaaatgaa gtagaaaagg
     2221 tggcgcttta aatgaaaaat ttgttgtcaa tggaagcatt aaccgtccat gaaatcgagc
     2281 atttattaga gcaggcggca cagtttaaac gcgggaaaaa agcgactttt aatgaacaga
     2341 ctttcgcggt caatatgttt tttgaaccaa gtacgagaac acatacgagt tttgaagtag
     2401 cagagaaaaa gttaggtgtg gaggttgttt cttttgatgc agcgagctct agcatgacaa
     2461 aaggagaaac gctctacgat acactgctca caatgcaagc cgtcggggtc aatgtcgcag
     2521 tgattagaca ctcagaagaa aattactatg cgggactcga aaaattagac attgctattg
     2581 tgaacggcgg tgatggatgc ggtgaacatc cgagtcaatc actacttgac ttatttacaa
     2641 taaaagaaca atttggtact tttcagggtt tgaaagtagc gattgctggt gatattcgtc
     2701 acagtcgagt tgccaattcc aatatgaaag tgttaaaaag acttggtgcg gaactgtttt
     2761 tctccggacc gagagaatgg ttcgacgaaa gttacttagc atatggcact tacttatcgg
     2821 ttgatgaaat tgtggaaaaa gtggatgtgt tgatgctttt gcgtgtacaa catgagcgcc
     2881 atagtggaac agatgagttt acgaaagaaa gctaccacga aaaatttgga ttgacggaaa
     2941 atcgggcaaa gcagttaaaa gaagatgcaa tcattatgca cccaagccct gtgaaccgag
     3001 atgtggaaat tgctgatagt ttagtagaaa gcgaaaaatc acgcattgtt acgcaaatga
     3061 cgaatggcgt ttttataaga atggccattt tggaagctat tttaaaagaa caggaaatga
     3121 gggcgaaatt atgtacgtat taaaaaatgg gcaagtatta aacgcgtcag gtgaactgga
     3181 aaacaaagat gtacttattc aaaacggtaa agtcaatttg attgcggatt ccattgaagt
     3241 aacaagcggc gaggaatttg atgcgacagg gaaattaatt gccccaggtt ttatcgacgt
     3301 ccatgtacat cttcgtgagc cgggcgggga acataaagaa accattttaa caggaacaca
     3361 agcggcggca cgcggtggct atacgacaat ttgttcgatg ccgaatacaa aacctgttcc
     3421 agattccaaa gaagtaatgg aaagtttaca agcaaaaatt aaagaaacag cgaaagttcg
     3481 cgtgttacca tatgcttcga ttacaacaag ccttggaacg gacgaattag ttgattttga
     3541 agctttaaaa gaagctggtg catttgcttt tacagatgac ggggtaggcg tgcagttagc
     3601 tggaacaatg tatgaagcga tgaaacgagc agcagcacta gatatggcga ttgtggctca
     3661 ctgtgaagat aactcactta tctatggtgg cgttgtccat gacgggattt ttgctgaaaa
     3721 agaaggtctg aaaggtattc cgaatattgc tgaatctgtc caaatcgcac gtgacgtttt
     3781 actagcagaa gctgcaggtt gtcattatca tgtctgtcat atttcaacaa aagaatctgt
     3841 tcgtgttgtg cgagatgcaa aacgggcggg aattcgtgtc actgctgaag tttcaccaca
     3901 tcacttaatt ttagatgaag aagctattcc aggaaatgac ggtaattgga aaatgaaccc
     3961 cccacttcgt agcaaagaag atcgggcggc acttttagaa ggcttactgg atggtacgat
     4021 agattttatc gcaactgatc atgctccaca cgcagcggaa gaaaaaaatg taccgatgga
     4081 gcaagctgct ttcggaattg taggtctaga aacggcattc ccattactat atacccattt
     4141 tgttaaaacg aacgaatgga cattaaaaca gctaatcgac tggatgactg taaaaccagc
     4201 ggaatgcttt aaactcccat acgggaaatt agaagaaggc agcgtagcag atatcgtcgt
     4261 acttgattta gaaaaagaag cgaatattga cccagctact ttttattcaa aaggaaaaaa
     4321 cacaccattt gtaggagaaa cgtgtattgg atggccagta gcaacgtttt cggaaggcac
     4381 acttgtatac aatgaggggg aaattaaatg acaaagcgaa ttttaatgct agaagatggc
     4441 aattatttta tcggtgatgc gattggtagt gaaaaagaaa ccattggtga agttgtcttc
     4501 aatactggaa tgactggcta ccaagaaaca atcactgacc cttcgtacta tggtcaaatt
     4561 attactttta cgtatccact tgttggaaat tacggtgtga accgcgacga ttttgaatct
     4621 atcaatcctg ctgtgaaagg ggttgtggtt cgtgaagctg cagaattccc ttccaactgg
     4681 cgcaatcaaa ttactttaga tgattttttg aaagaaaaag gcatcccggg aatcgcggga
     4741 attgatacgc gtaaactaac gaaactaatt cgtaaagaag gaacgttaaa aggcatttta
     4801 gcagcagaaa ctgcaaacaa agaggaattg ctacaccact tgcgctctgt acgtttgcca
     4861 gtcgatcaag tacatgaagt ttcctctgct aaagcatttg caagcccagg agatggtaaa
     4921 cgagtggtgc ttgttgatta tggtgtgaaa agttcaattt tacgggaact gaataaacgt
     4981 aactgttacg tgacggttgt tccttacaac acaacagccg aagaaattct tgcaatgcat
     5041 ccggatggcg tgatgttatc caatggacct ggggatccga aagatgtgcc agaagcatta
     5101 gaaatgatac gcggcattca aggcaagctc ccactattcg gaatttgctt agggcaccaa
     5161 ctgtttgcac ttgcgaacgg agcagataca tttaaactga aattcgggca tcgtggcgcg
     5221 aatcatccgg tgaaagaact agccactgga cgtgttgatt tcactgcaca aaaccacggt
     5281 tacgcagtag aaaaagattc acttattgga acagatttaa aagtaacaca cattgaatta
     5341 aatgatgaaa cggtagaagg gctggcacat aaagaatatc cagcctatac agtacaatat
     5401 cacccagaag caaacccagg accaagtgac gtcaactact tatttgatga atttatggaa
     5461 atgatgaatg ggaaagagga gggtgaacta catgcctaaa cgtgacgata taaaaacaat
     5521 tctagtaatc ggttctggcc caattgttat tggacaagca gcagagttcg attatgctgg
     5581 gacacaagca tgcctgagtt tgaaagaaga agggtaccgg gtagttttag tgaactcaaa
     5641 tccagcgaca attatgacgg atgcagaaat ggcggacaaa gtttacattg aaccaattac
     5701 gcttgatttt gtatcgcgca ttattcgtaa agaacgtccg gacgccattt tgccaacgct
     5761 tgggggacaa acgggattga acatggcgat ggaactttca gctgctggga ttttggatga
     5821 atgtaacgta gaagtgttag gaacagattt aacggcgatt aaaaaagcgg aagaccgtga
     5881 agctttccgg gacttgatga atgaactagg ggaaccagtg ccagaaagtg acattattca
     5941 taatttggac gaagcgtata cttttgttga acgtatcggc tacccagtta tcgtgcgccc
     6001 ggcatatacg cttggtggtt ctggcggcgg gatttgccac aatgaacaag aattaattga
     6061 aacggtgaca agtggtctaa aactgagtcc agtaacacaa tgtttactag aaaaaagtat
     6121 cgctggtttt aaagaagtgg aatatgaagt aatgcgtgat gcgaacaata acgcaatggt
     6181 tgtttgtaac atggaaaata ttgacccagt cggcatacat acaggagatt cgattgttgt
     6241 cgcaccaagc caaacgcttt ccgaccgcga ataccaattg ttgcgcgatg tgtcgttgaa
     6301 aattatccgt gcactagaaa ttgaaggcgg ctgtaacgtt cagctggcac ttgatccaga
     6361 tagttataat tactatgtta tcgaagtaaa cccacgtgtg agccgttcct ctgcgctagc
     6421 ttccaaagcg accggctacc caattgccaa acttgcagct aaaatcgcag ttggcttaac
     6481 actggatgaa gtgagaaatc cagtaacagg aacaactttt gcccatttcg aaccaacact
     6541 agattatgtt gttgcgaaaa tcccacgctt tgcttttgac aaatttgagc aagcggatcg
     6601 tcgccttgga acacaaatga aagcaactgg tgaagtcatg gcaattggcc gttcatggga
     6661 agaagcactt ctaaaagcag tgcgctccct agaaattggc gctgaccatt tgttgcttga
     6721 agaagcggaa aatgctgacg aagcaacatt agaacgcaaa atttgcttcc cagaagatga
     6781 tcgtttattc ttcctagcag cagctttgcg ccgaggtcaa acaatcgaac aactccacgc
     6841 gaaaacaaag atagatttat tcttcttata taaattaagt aaaacaatcg aactggaaaa
     6901 tcgtatcaaa gaaaatccgc aaaaccaaga aattttggca gaagcgaaac gggccggttt
     6961 ttctgacgct ttccttgcca cttgttggaa tgtcgatgaa caagcgattt atgacttaag
     7021 aaaagcacaa aatcttttcc cagtatacaa gatggttgat acgtgtgcag cggaatttga
     7081 atcgacaacc ccttattttt acagcacata tgaagaggaa aatgagtcaa cacgatcagc
     7141 gaaagaaagc gtgattgtcc ttggttctgg tccgattcgg attgggcaag gggtagaatt
     7201 cgactatgca acggtgcact ccgtgtgggc cattcaacaa gcaggctatg aagcaattat
     7261 cattaataat aacccagaaa ccgtttcgac cgactttagt atctcggaca aactttactt
     7321 tgagcctttg acgctagagg atgttatgca cgttattgag atcgaacagc cactaggggt
     7381 tgtcgtgcaa ttcggtggac aaacagcgat taatttagca gacggtttag caaaacgcgg
     7441 cgtaaaaatt ttaggtacaa gtttagaaga tacggaccgc gcagaaaacc gtgatgcctt
     7501 tgaaaaagca ttagaaattc tacaaattcc acaaccagct gggaaaacgg ccacatcggt
     7561 agaagaagca atcaacgtag cgacagacat cggctatccg gtccttgtac gcccatctta
     7621 tgtacttggt ggtcgagcga tggaaatcgt agaatcagaa gaagcattaa aacattatat
     7681 gacgaatgcg gtaaaagtaa atccaaaaca cccagtttta gtagaccgtt acgtaagcgg
     7741 ccaagaagta gaagtagatg caatcagtga cggtgaaaac gtcttaatcc ctggtatcat
     7801 ggaacatatc gaacgtgcgg gagttcattc aggtgactcg attgccgtat atccagcgca
     7861 acgtttaagc agtcaagtga aaaatacgat tgtcgattat acgacaaggc tggcaactgg
     7921 cttaaacatt atcggaatgc tgaatatcca atatgtcgta gatggcgaag aagttttcgt
     7981 tattgaagta aatccgcgct caagccggac ggcgccattt ttaagtaaaa ttaccgaaat
     8041 tccgatggcg aatgtggcga caagagttat cttaggggag aacttaatcg accttggtta
     8101 cacgccagga cttgccccag aaaaacaaga aatttttgtc aaagtgccgg tgttctcttt
     8161 cgcgaaattg cgtagtgtgg atacgtcgct tggacctgaa atgaaatcga ccggagaagt
     8221 tatggggaaa gatgtgacgc tcgaaaaagc actctacaaa ggttttgtgg cgagtgggac
     8281 aacgatgcat gactacggga cagtactttt aactgtagcg gaccgcgata aagaagaagc
     8341 ggtagaacta gcgaaacgat ttaatcgcat aggctttact attatggcaa caaaaggaac
     8401 agcaagcacg ttagaagaag cagacattcc agtgtcacaa gtgaaaaaaa ttggagaaaa
     8461 tcaagaaacg ttgatcgatt atattcgaaa tggccaagta acgctcgtag tgaacacatt
     8521 aacgactggt aaacgacctg agcgtgatgg cttccaaatt cgccgcgaat ctgtagaaaa
     8581 tggtattccg gtctgtacct cgctcgatac agcggaagca atcttgcgtg tactggaatc
     8641 gcgctctttt gaactcgaat cgatgaatac cagtgaagta aaacaaccta aagcacgtgt
     8701 ttaaatagaa gaaacggggt ggaaccgtgt tacagacgga aatgaaggtc attcagcaaa
     8761 ccgaaattgc agataaagta tacgaattaa ttttgacagg ggaacgtgta gccgatatgt
     8821 caccgggaca gtttttaatg ctgaaaccga gtcgttctga tttacttatg agacgaccga
     8881 taagtatttg ttcttacgat aaaaccgcaa agacatgcat tctgttgtac cggatagaag
     8941 gtgacgggac aagagatttc agtaaacttt cagaagggga tactatcgat gtgttaggtc
     9001 cgcttggaaa aggattcgat atcgaccaga cacctgcacc aaaaaccgct cttttaatcg
     9061 ggggtggaat tggtgtccct cctatgtatc aactcggtaa agagttagct ggaaaaggcg
     9121 tacaagtcac gtttgtaaat ggattccaat ctgcgaaaga tagtttttat gaaaaagaaa
     9181 tgaatgcata tggcacagtt catattgcga cggtggacgg ctcacttgga acacaaggtt
     9241 tcgtcacaga catcacgaac aattttccag aagaaccaga tgtcatctat agttgcggac
     9301 caaaagcgat gctccaggcc gtgaaagcta gttttccgga aacgaaaaca tatctttctt
     9361 tagaagaacg aatggcatgc ggtattgggg cttgctacgc ttgtgtttgt ccaaaagcag
     9421 atgatgcgaa aaaacaattt aaagtgtgcg aagacggccc agtatttcgt gcggatgagg
     9481 tgagtttatg aaccgattag cagtagaaat tcctggatta tcgctcaaaa acccgattat
     9541 gccagcatca ggatgttttg gcttcggaca agaatatagc aaatactatg atttaaatga
     9601 acttggtgcg attatggcca aagccgtgac gccagaacct agacttggga atcccactcc
     9661 gcgagtagca gaaaccgcga gcgggatgct gaatgcaatc ggcttacaaa atccaggtct
     9721 agagcatgtt ttggcgcacg aactgccatt tttagaacaa tttgaaacac cgattatcgc
     9781 taatgtggcg ggtgcgacgg aggatgatta tgtccaagtc tgcgccagaa ttggggaatc
     9841 gaaagcagtg aaagccatcg aacttaatat ttcctgtccc aatgtgaaac atgggggtat
     9901 cgcatttgga acagatccgg atgttgcgca tcgtttaacg aaagccgtga aaaatgtcgc
     9961 aactgtgcca gtttacgtga aattatcacc gaatgtagcg gatattgttt ccatcgcgca
    10021 agcaattgaa gccgctggtg cggacggact cacaatgata aataccttac tcggcatgcg
    10081 tattgattta aaaacaagaa aaccaatcat cgcaaatgga acaggtggac tttctggccc
    10141 agcgattaaa ccggtggcta ttcggatgat tcaccaagtc cgcgaggtaa gcaatatccc
    10201 tatcattggc atgggcggcg tgcaaactgt agatgacgta ttagaattct tgattgccgg
    10261 agcagatgca gtcgcagtag gcacgatgaa ttttaccgac ccatttattt gtccgaaatt
    10321 aattagcgaa ctaccaaaac gaatggatga actcggtatt tcttccctac aagaacttaa
    10381 aaaggagcga gcaaatcaat gaataaacca attatcgcgc tagatttcca gacttacgaa
    10441 gaagtagaga cctttttagc caaattttcg ggagaaacgc tatccgtgaa agtcggcatg
    10501 gaactttttt atagcaacgg tccaatcatt gttgaaaaaa taaagcaaca acatcatgaa
    10561 atcttcttgg atttaaaact gcatgacatc ccaaacactg tcaaaagtgc gatgattggc
    10621 ttggcaaaac taggcgtaga tatggttaat gtacatgcgg ctggtgggaa gaaaatgatg
    10681 gaagctgcca gggaaggtct ggaaataggt tcttcaagtg gcaaacgtcc aaaaattatt
    10741 gccgtaactc aactgacaag tacaagtgag acagacatgc aaacagaaca attaataaaa
    10801 acaagtctac ttgaatccgt catgcattat agcaatttat cgaaacaagc tggtttagac
    10861 ggcgtcgttt gctccgcgct agaagcagaa gatattaaac aacaaaatgg cgctgatttt
    10921 ttacgtgtaa caccaggcat ccgattagca agcgacgcag ccgacgatca aattcgtgtc
    10981 gtaacaccag aaaaagcgcg tttgattggt tcgtcaaaca ttgtcgttgg tcgttccatc
    11041 acgcgcgcaa acgacccggt agaagcgtat aatcaagttt taaaggagtg gaatgcatga
    11101 gcatcgaaaa acaagtagct gaacaattat tagaaattaa agctgtattt ttaaaaccaa
    11161 atgagccttt cacttgggca tctggaatta aatcccctat atattgcgac aatcgcctaa
    11221 cgctaggctt tccaaaagtc cgtcagttta tcgccaagtc attagccgaa aaaatcaagc
    11281 aaacctttgg tgaagtagat gttgttgcag gcaccgcaac tgctggtatt ccacatgctg
    11341 catgggtgag tgatttacta gatttaccaa tggtctacgt ccgatcaaaa gctaaagaac
    11401 acggcaaagg gaatcaaatc gaaggaccaa tttctaaagg tcaaaaagta gtggtcattg
    11461 aagatttgat ttcaactggt ggaagttcat taaaagcagt ggaagcgctg gaagaagctg
    11521 gagcggaagt agttggaatc gcggccatat ttacatatgg acttgctaaa ggaaaacaac
    11581 tgctagaaga atctggcaca aaactagtaa cattaacgaa ctatgatgag ctaattgaag
    11641 tagctttaaa tgaaaattac gtgactggtg aagatatgga aacattaaaa gaatggaaga
    11701 aaaatccaga aaactgggga aaataaaaag aagctcacct ttgttacggt gagcttcttt
    11761 ttctattaat atactttata actttcacca gtttgtgcac caaagacgct tttttcaaac
    11821 gcacgagcga cttttgcggc tggaactgga acgaaacctt ggaaaaatga ttctagtttg
    11881 tcccaagatt cttctaatat attcgggctc actgtattaa tccggattcc acgtggcatt
    11941 tcaatcgcag cagattttgc aaaagctgta accgcgccat ttgccatcgc agcagaagcc
    12001 ccttggacga ttggatcttc catcataatg ccagtagtaa gggtgaagct tccattatca
    12061 ttcaatgagt taatgcccag caaaactaga ttaatttgac cacctaattt actactaatc
    12121 gtcactgcat ttttctcagg tgttaattct gttaaaggag aaaaagtggc gcttcctgtg
    12181 gctgaaacaa ttgcgtctac ttttccaacc tgttcgtaca tttttttgat gctatcgaca
    12241 ctcgtaatat ccaccgtcac atcaccacta tgtctaccag cagtaatcac ttcggccttt
    12301 ttctccaaac gttctttcac cgcagagcca agcgtaccag aagcaccaat taataaaatt
    12361 ttcattcctc tatcatcctt ccaataaaaa agtaaagtca gtacacatct accctaaaat
    12421 tagaaagaaa aaacggctcc aggaaggaac cgttaatttt ttaactctaa aacaagcttt
    12481 tcatcaggtg taacgaagta agtcgtttgg ttatcataaa tgacataacc aggtttggca
    12541 ccatttggtt tcttcacgtg ttttacgagc gtgccgtcaa cggggacggt tgctgaaagg
    12601 cgcgctttcg aataataggc tgcaatcatt gcggcttctg taatcgatgt ctcatctgga
    12661 tcattcgatt gaatgaccac atgcgaacca ggcaaatctt ttacatggaa ccagtattca
    12721 ttattcctag ctaatttatt cgttaaataa tcattttgtt tattattttt tccgactaaa
    12781 atcgttaagc cggtcgaaga agtatatttt tctggagcag gtaaagtcgc ttttttccgg
    12841 ctgccttttt tctgtttgta gcgaagatag ccttgttcag ctagttcttg gcggatttct
    12901 tccacgtctt gtgggccaga tgtttcaagt tgtgattcca cggactctaa gtaagtaatt
    12961 tcttctttcg tgagcgcgat ttgctctttc actacttcga ccgcgttacg tagtttttgg
    13021 tagcggctaa agtagctttg cgcattggcg gatggtgttt ttctagtatc aagtgcaatc
    13081 gtcattttct tcatatcatc gtaaaagttt tctacagtaa tttcttccat cccgcgttcc
    13141 attaaatgca gattggcagt tagaagttca ccttgaatac gataaacatc tgctttttct
    13201 gtttcgagca aagtgttttc gagtttttcg attttcagcc tgcttcgagc cagttcgttg
    13261 gataagagtt tttctaaatc atgtgcaaat tgatggacac gatcacgacg cgctttacca
    13321 atataaaaat ggtctaatag ggtgcttaaa ttcgcgaatt cggttgtttc tgcatcgaca
    13381 tggcggagcg ggaaaaaata gtaatcctct ttattttgga tgcgccattc gtttggcacg
    13441 gctgcatggc ctaaatgctc gttcactagc ccaattactt cgaaaaaggc ggcaactagc
    13501 gaatctgccg ttaagttccc agcacgaaat actatttccc gagcaagcaa agggctgaat
    13561 cctgcaaaat tttgtacaag ttgcttatcc attcgacccg ctgagaaatc tagtctatcc
    13621 agaatctgct ccgaagtaac ctcaaatggg tggagtttat ccgttgcagg aggtaaaaca
    13681 taagtcgctc ccggaagcag tgttcggtaa ctattttgtg caggggaaac gtgtttaata
    13741 caatcaacaa tcacattttt cgcacggtcg acaagagtga tattactatg ccgtcccata
    13801 atttctacaa ataaatcaca aaaacgattt tcaccgatat catctttacc gcgaatacta
    13861 aattgtaaaa ttcgttcatt aggaagttgc gtaatcgatt caataatcgc gccttctaag
    13921 tattttcgca gtaacataca aaacatcggt ggggttgctg ggttttcggg aatatcatcg
    13981 gtccactgaa tccgcgcata gcttggatgc gaggagatca gtaaacgttt attttcacgg
    14041 ttttttcgaa tatataaaac aagttcatgc gagaacggtt gatggatttt cataatacgt
    14101 ccactttctc cgtgttcggc aagttcttcg gtcatcgctt ttaaaaacat tgcatcaaac
    14161 gccattagtt attcattcct ttgtgagtta gttactttct attttaacat acattccgaa
    14221 aatgtattgt atgcaaggag tagctttggt ataataagaa gtcagaacaa atttcaagta
    14281 atcttagagg gaactttaag ttatgaaagg tgtcttgcca aatggtgaaa agcatgacgg
    14341 gatttgggcg tgcgacgaaa gaatttgaag cgttcaaagt aaccattgaa ttaaaagcag
    14401 tcaaccaccg ctactccgaa tttctttttc ggatgccaaa acaacttgct tatttagaag
    14461 gaaaattaaa aaaaatcata agtaagcaaa tcaaacgtgg tagaatcgaa gttttctttt
    14521 ccatcacggg agagcaaatc acaaaacgcg aactacatat tgactgggac ctcgcagata
    14581 gctattaccg ttttattaaa caagcaagcg ctagatatga attacaagaa ttaccaacta
    14641 tggctgattt actgcaagaa caagcctatc tttctattga ggaagaagtg gaagcaagta
    14701 gcgaactaga gcgattagtt ttagaaacac ttgcccgcgc aactgagcga ctggatgaga
    14761 tgagaagtat ggaaggagca gaattactgc tttatttcaa acaacatctt accgcattgg
    14821 agaaaagttt ggagatcatt caagctgaaa ttccaaatac agaaaaacat taccaagaaa
    14881 aaattgaaac acgtttacaa aacgttgtag gcgaccaatt tgatccaagt atcgttctta
    14941 ccgaagtcgc aatgctactt gaaaaggcag atattaacga agaagtcgaa cgaacaaaga
    15001 gtcatttaaa gcaattttat ggtattattt tactcgaaga accaattggg cggaagctgg
    15061 attttctgat tcaagagatg aaccgcgaag tcaacacgat tggctccaaa gcaagttctc
    15121 taaaaatcac tgaacaagtg gtagaaatga aaacgacgct tgaaaaaatt cgagaacaag
    15181 tgcaaaatgt ggaatgatat gcaggagggg aaatgatgac agaaagagga ctgttaattg
    15241 tactttcagg tccatctgga gtaggtaagg gaactgttcg ggaagctgtt tttaaagatc
    15301 cggaaacaag ttttgattat tctatttcca tgacaacgcg tcttcctcgt gaaggcgaac
    15361 aagacggggt cgattattat tttcgttcac gagaagtgtt tgaacaagct atcaaagacg
    15421 gaaagatgtt agaatatgca gagtacgtcg gtaattatta cggcactccg cttgaatatg
    15481 tcgaggaaaa attagccgca ggagtggata tttttctcga aattgaagta caaggagcaa
    15541 tgcaagttcg aaaagcgatg ccagaaggaa ttttcatttt cttaacgcca ccagatttgt
    15601 ctgagcttaa aaaccggatt atcggtcgcg gtacagaatc gatggaagtt gtcgaggaac
    15661 gcatggaaac agcgaagaaa gaaatcgaaa tgatggcgtc ttatgattat gctgtggtga
    15721 atgatgtagt tgcaaacgcc gtacaaaaaa tcaaaggcat cgtcgaaaca gaacacttaa
    15781 aaactgagcg agtaattcat cgctacaaaa aaatgttgga gggattacaa tgatgttata
    15841 tccatcaatt gataatttat tgttaaaaat cgactcaaaa tattcgctag ttacagtggc
    15901 cgctaaacgc gcacgctaca tgcaactgga aaatgataaa ggcgtattgc cgagctacca
    15961 gtccgacaaa tttgttggga aagcgttaga agaaattcac gctggaaaat tagttttaca
    16021 aaacgacgat aaataagctt aactgctccg ctttcctgcg gggctttttt gttagccaca
    16081 agtgcaataa aaataagctg aaatctagtt tcttca
//
LOCUS       DASDYO010000068        15943 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.068, whole genome shotgun sequence.
ACCESSION   DASDYO010000068 DASDYO010000000
VERSION     DASDYO010000068.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15943)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15943)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15943
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.068"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..2958
                     /gene="addA"
                     /locus_tag="U0290_001782"
     CDS             <1..2958
                     /gene="addA"
                     /locus_tag="U0290_001782"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase-exonuclease AddAB subunit AddA"
                     /protein_id="HEM2301823.1"
                     /translation="NNGPVPYLATLENDLAQIEAITELSWNSWGQLKKAIESIDFKRI
                     PTLKNKSDYDEEYVEEAKKFRDAAKKEIKNIATDWFSREEINYLSDLEKMKPDIKTLS
                     RLVKKFAENFFEEKQQRGVLDFNDLEHLALKILLKDNEASEVAKNYQKQFKEVLIDEY
                     QDTNMVQETILRLVTNSGEEQGNLFMVGDVKQSIYRFRLAEPTLFMTKYQTYQQDGNG
                     SGIRIDLSQNFRSRKEVLDATNFIFHQLMDKHIAEIDYDAAAELTLGASFPETTDMAT
                     ELLLIDMKSVESETEDELSPQELQKNQVESRAIAMKIKEMIDNKFPIFDKKMKQNRPI
                     QYRDIVILARAMTSAPDMEEAMKVQDIPFYANNNSGYFETTEVATMIALMKVIDNPYQ
                     DIPLAAVLRSPIIGLNEEELGQVRMAKKNGYFYDALLTYKDTTVSETADKMSDFIQQL
                     NNWRELSIRENLTSLIWQIYQETNFYEFVGGLPGGKQRQANLRALYDRANQYEKTSFR
                     GLFRFVRFVERLEVRGDDLGTAKTLGEKEDVVRMMTIHASKGLEFPVVIVSGLSRKFN
                     MRDIYSKTLLDKDYGFASNYRDIEKMIVYPTIMQQAMKQKKSREMIAEEMRVLYVALT
                     RAEEKLILTATVPDFEKTSKNWLQVAKEKETILPASTRAKAKCYLDWIGNATIRHPNF
                     KELLCEEMIQTLPTDMKLQIEIKTKEMFLTNELEKTETVNWLDNIKEHQPIPVKSPYK
                     DEIQRYMNYEYQNEEATEIRAKQSVTELKRQFSLQDSWSDTTLLKEFQKVSLDRPKFL
                     QQNKLSATEIGTAMHTLMQAVSLEHQPTKEDLEQLLQTMREKDILTEAQLKAINIKQV
                     LGFFESQLGKTMLQKKDLVKREVPFSYLLPVSELYEKVDIDERVLIQGVVDSMIEEEE
                     TITLIDYKTDKIEGRYSNWEAAEKIMKERYHIQIKLYAKAIQAISGKKVDAAYLYFFD
                     GQHICQINTKEGF"
     gene            2959..3807
                     /locus_tag="U0290_001783"
     CDS             2959..3807
                     /locus_tag="U0290_001783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fumarylacetoacetate hydrolase family protein"
                     /protein_id="HEM2301824.1"
                     /translation="MKWLSYQHEGDFNYGILTPENKIIPAQTIFSNPPATLLDFIKEK
                     PLVPELKGIKGDIDLAEVEIQVPITPPNNIIAIGKNYYNHVLEMGSKEDVPEHILVFT
                     KSANSLLPHNGKIELHQNLTSQLDYEGELAIIIGEKVRDLSEQDALSAIFGFTILNDV
                     TARDLQKKHKQFYLGKSLDASCPMGPYVLENNGSKEVVFHIETKVNGEIRQSDSTDKC
                     IFNLARIISDLSKGHTLLPGDVIATGTPSGVGKGMTPPTFLQAGDVVEITIDKIGTLT
                     NKVRKS"
     gene            3827..4189
                     /locus_tag="U0290_001784"
     CDS             3827..4189
                     /locus_tag="U0290_001784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YisL family protein"
                     /protein_id="HEM2301825.1"
                     /translation="MWGYIHLISWVAIVVLTVTALLIYSKSTKSFTMLQMINRVFYIL
                     VILSGIMMVKYSIEQSWILAIFKILMGIIVIGVVEMLLSYRKQQKPTGMFLMIFVIVV
                     VITISLGFYLSGGYPLFN"
     gene            4273..5175
                     /locus_tag="U0290_001785"
     CDS             4273..5175
                     /locus_tag="U0290_001785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM2301826.1"
                     /translation="MSSKIVYKEYAKKTAIAIIAALLNAIGMNFFLIPAQVYAAGLNG
                     VAQLGSDMLRDSMNISISTGLLVLLLNIPVAILGWLKVGKSFTVFSFLTVAFMSFFLI
                     VIPEVQVSSDILLNAIFGALIASVGIGLALKFGISTGGLDIVAMYITIKTGRSFGKYF
                     LLLNGVIIIVAGFAYDWTFALYTLISLYVQSRVIDIIHTRHQKLTVMIMTQHSETVIK
                     AIHENMVRGITVVDAMGGYSKEDVAMLIMVITRYELYDITHIVGEFDSKAFINVMETS
                     SVFGDFRSEADQKLAMAMYKNKMM"
     gene            complement(5253..6098)
                     /locus_tag="U0290_001786"
     CDS             complement(5253..6098)
                     /locus_tag="U0290_001786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2301827.1"
                     /translation="MNQPYELKEQTMSKKLIVLDLDGTTLRDDLTISSHTKKTLEKAR
                     MAGHEVMIATGRPYRISGSYYHELGLTTPIVNFNGAVYHHPRLTTFAEGYHHAIDLQV
                     VHELLDFSNGFSLDNIAAEVQDNVFLKERNNSVPETFHLGTENIVFGNIRDAIKSDAT
                     SLLFFGKIDQLDLISKHLDESLSGVISHHTWGASAWPAVEIIKFGIHKAIGVQAAAKT
                     LGFDRKDIIAFGDETNDLQMLDYAGVGVAMGNAAESVKNVANVVTASNQDDGIALYLE
                     ENLNL"
     gene            6217..6969
                     /gene="yjfP"
                     /locus_tag="U0290_001787"
     CDS             6217..6969
                     /gene="yjfP"
                     /locus_tag="U0290_001787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase"
                     /protein_id="HEM2301828.1"
                     /translation="MIQVENEQIAGIPVLHISNSENADQMLPTIIFYHGFTSQKELYL
                     HYGYLLAQRGFRVVLPDAKLHGERLQGANPEDQATFFWDVIETNIIEFPLITNELIKA
                     GKTDANRIGVGGVSMGAITSLGLLGQYENIKVAVSLMGSAYYVDFAKELSKYALAQGL
                     TFPYDVDERILTLQKYDLTQNITKINNRPLLLWHGKKDDVVPFAYSEKLYQTLVEESL
                     ADNVQFIIDDNAKHKVSVEGMLQGVSFFEKFL"
     gene            7034..7342
                     /locus_tag="U0290_001788"
     CDS             7034..7342
                     /locus_tag="U0290_001788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metal-sulfur cluster assembly factor"
                     /protein_id="HEM2301829.1"
                     /translation="MDEQLKENLMGALEQVIDPELGIDIVNIGLVYDVELDDDGLCTV
                     SMTLTTMGCPLAGILTEQVQMALSDIPEVKDTNVNLVWNPPWTKDRMSRYAKIALGIR
                     "
     gene            7422..8297
                     /locus_tag="U0290_001789"
     CDS             7422..8297
                     /locus_tag="U0290_001789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2301830.1"
                     /translation="MNYEMISDYKDNKMYRDSFNKLAESTFDINFEEWFRSGFWNDKY
                     VCYSYIDNNEVISNVSINKMNLIYQGENYSALQIGTVMTHPNYRGQGLAKNLLNHVIA
                     KYEDQYDFLYLFANDTVLDFYPKFGFERIEESSFTVDACNLKKKASKLKKLNPDNKTD
                     FQLISRIVSKRAPLSNILDVKESEDLLMFYVLIALKNELYYLEELDVIVLMEQEGTDL
                     YVLDILSTKKLDVVEVLSYLSTKKIETIHLLFTPEKSKYIDAAYIIETEDMLFVRPNV
                     LTSENYFLFPATSHA"
     gene            complement(8288..8638)
                     /locus_tag="U0290_001790"
     CDS             complement(8288..8638)
                     /locus_tag="U0290_001790"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465783.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2301831.1"
                     /translation="MEIQVEEAVVKLILHGGNTRKEAYKAIDFAEKYQFDEADKHLQI
                     AQDQFQEGHIWQTKLVSIRDSETVAHPSFLLIHGQDHLMTAQAELQLAKRIIKQYKHQ
                     QRIEERLTKLENQA"
     gene            8789..8980
                     /locus_tag="U0290_001791"
     CDS             8789..8980
                     /locus_tag="U0290_001791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301832.1"
                     /translation="MEERLYELEDKVQDLELEVHDLRDRIQLLEDKPAARSSLLGHNV
                     WVLIPLVAIISWMVVEIFS"
     gene            8977..9321
                     /locus_tag="U0290_001792"
     CDS             8977..9321
                     /locus_tag="U0290_001792"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465781.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301833.1"
                     /translation="MKGTFNGFLFICNIVIFIQKITIKVSQFSSFLSLSQKIYIYLLA
                     FFKNNSKISYRIEFYLDESFIFINVIFMGIRPYHGYNDFWCIHLPIEWQLVRHLFRHQ
                     NHYLFSFISLAV"
     gene            9485..10006
                     /locus_tag="U0290_001793"
     CDS             9485..10006
                     /locus_tag="U0290_001793"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 1 glutamine amidotransferase"
                     /protein_id="HEM2301834.1"
                     /translation="MTLKGKKVIALVSEDFEDLELWYPVLRLREAGASVHLVAEEAKK
                     VYHGKYGVPVTSDYDFDSVRAEDYDGILVPGGWSPDKLRRFDSVLNLVRAFDKAKKPI
                     GQICHAGWVLVSAGILEGVNVTSTPGIKDDMTNAGAIWHNEPVVTDGHIISSRRPPDL
                     PEYLPAFISALED"
     gene            complement(10049..10315)
                     /locus_tag="U0290_001794"
     CDS             complement(10049..10315)
                     /locus_tag="U0290_001794"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301835.1"
                     /translation="MFLKSLLAGVALAVVVFLASFLMPDYTVSTLYSIVTTIIVFASI
                     ILSAFVSFGGRSGNPSRKSQLRWSILLLVAAIPSFIGFIVTFYF"
     gene            complement(10428..11720)
                     /locus_tag="U0290_001795"
     CDS             complement(10428..11720)
                     /locus_tag="U0290_001795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEM2301836.1"
                     /translation="MFQLKANGTDVKTEVISGFTTFLTMVYIVVVNPAILSAAGVPFN
                     TVFMATIISAVIGTLWMAIFANYPIAIAPGLGMNAYFVTVVTTQKLDYSVAFAAVFVA
                     GIIFLLLSLTPLREKIIEAIPHNLKAGITAGIGLFIAFLGFRMTGIIVSNDSNLVGLG
                     DLHSKEAILAIVGLLITLILLALNVKGALFIGMIATGIIAFITGELKFTEGIVKLPPM
                     PEFVFTNPIHAFGDVMSYGLYAVVLSFLLITIFDTTGTMIGVAKKAGLMKGESLPNAK
                     QALMADAVATSVGSMFGTTPTSAYIESSAGVATGGRTGLTTLTVAILFMVSAFFAPLV
                     GAVSGISAITAPALIVVGSMMIGAVKEIDWDTLDEAFPAFLVILAMPLTSSIAIGLAF
                     GFISYPVLKVFTGKWRELNWFLIVIAVLFFILVAFLPH"
     gene            11893..12522
                     /locus_tag="U0290_001796"
     CDS             11893..12522
                     /locus_tag="U0290_001796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2301837.1"
                     /translation="MKAVVFDFDGTMLDTENLWYTETMNYLKETYDIDLPDEIYQQII
                     GTSEEPIIRYMMEATNGAFDKEAFLTTVAEACHLGQQSLGFRDGFKEFFEQVKANDFK
                     IGLATSSGFDWIGPTLDRLGILADFETIQTADHVDEIKPHPALYLQAVEALGVKPEEA
                     IAIEDSKNGALSAMQAGLKVYIVPNEATKNITFPKEATVVSSFAEINLK"
     gene            complement(12566..13714)
                     /locus_tag="U0290_001797"
     CDS             complement(12566..13714)
                     /locus_tag="U0290_001797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM2301838.1"
                     /translation="MNNSKIAKKHQQMPVNILADIGTLAKTMPDILDLSIGDPDLITD
                     ESIINAAFEDVRAGHTKYTESGGDVELIDAIRGYFSRNYDLSFERSQIRATVGALHGM
                     YLTLQTILDDGDEVIIHEPYFSPYKDQVLNSGGTPIIIPTYEKDDFAINVDILEAAIT
                     DKTKALILNSPNNPTGAVFSPETFEKIANLAKKYDFFILSDEVYDGFSFYEDFVPMAK
                     FAPDHTITFGSMSKNFAMTGWRLGYMIAPTYLNEAAKIINEGITYSAPTPSQRAAIYA
                     LNHSETLIPLVTETFQKRLEYIAKRVEEIPYLSLHPLKGSIYAFINISKTNMDSVSFT
                     EYVLKETQVLVIPGLAFGESGDNYVRLAATQDISVLEEAFNRLAKLTF"
     gene            complement(13790..14515)
                     /locus_tag="U0290_001798"
     CDS             complement(13790..14515)
                     /locus_tag="U0290_001798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid ABC transporter ATP-binding protein"
                     /protein_id="HEM2301839.1"
                     /translation="MIDIKNLHKHFGKLEVLKGIDLEIASGEVVVVIGPSGSGKSTFL
                     RCLNLLEQPTTGTILFENKDLMAKQTNVNELRQKMGMVFQNFNLFPHKNVLENLMLAP
                     MKVKNEDSAAAKKHALSLLEKVGLADKATSYPSQLSGGQQQRVAIARALAMNPDVMLF
                     DEPTSALDPEMVGEVLSVMKSLAKEGMTMVVVTHEMGFAREVADRVVFMDAGVIQEQG
                     TPEEVFGNPQNDRTKDFLGKVLA"
     gene            complement(14508..>15943)
                     /locus_tag="U0290_001799"
     CDS             complement(14508..>15943)
                     /locus_tag="U0290_001799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465774.1"
                     /note="The N-terminal region of this protein, as described
                     by TIGR01726, is a three transmembrane segment that
                     identifies a subfamily of ABC transporter permease
                     subunits, which specificities that include histidine,
                     arginine, glutamine, glutamate, L-cystine (sic), the
                     opines (in Agrobacterium) octopine and nopaline, etc;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM2301840.1"
                     /translation="AAILLVFIVVFSGFTTVFAADTEDQTLAKIQEKGVLTVGLSADY
                     PPYEFHQTIDGKDKVVGFDVSIAEKIAKDLDVKLEIKEMNFDSLLGSLKTGKIDMIIS
                     GMSPTPERQKEVDFSDPYMFVQQRVVIRKTDKDKFTSVNDFSGVKVGAQKQTTQEELA
                     QNELVGSEVVSLQKVPDLILNLKSNKVDAVVLEGPVAEAYISQDKTLAMADIKFANGS
                     KETAIAMPKGSTALQEKVNASIKDIQDTGLLKKYQKEANKLMFQDGSFYEKYGNYFIT
                     GTLITIALAAIGVLCGAILGSLLALMKLAKTRWLRWPAACYIEFVRGTPLLIQIFIVF
                     FGTQIIGMDVSAFVSGCIALSLNSAAYVAEIIRAGISAVNKGQMEAARSLGMTQGASM
                     RYIILPQAVKNILPALGNEFVTVIKESSIVSVIGVTELMFMTGVVQGASFKPFIPLII
                     TSLIYFVLTFSLSRLLGVAERRMRTSD"
BASE COUNT         5270 a         2603 c         3177 g         4893 t
ORIGIN      
        1 aataatggac ctgtacctta tttagctacg ttagaaaatg atttagctca aattgaagca
       61 ataacagaat tgagctggaa tagctgggga cagctgaaaa aggctattga aagtattgat
      121 tttaagcgta ttccaacact aaaaaataaa agtgattacg atgaagaata tgtagaggaa
      181 gcaaagaaat ttcgagatgc agcaaaaaaa gaaattaaaa atatcgcaac tgattggttt
      241 tcacgagaag aaataaatta tttatctgac ttagaaaaaa tgaaaccaga catcaaaacc
      301 ttgagtagat tagtgaaaaa atttgctgaa aatttctttg aagaaaaaca gcaaagagga
      361 gtattggatt ttaatgattt agaacactta gcattaaaga ttttattaaa agacaatgaa
      421 gcatcagaag ttgctaaaaa ctatcaaaaa caatttaaag aagtattaat tgatgaatat
      481 caagatacta atatggtgca agaaactatc ctacgactag taactaattc aggtgaggaa
      541 caagggaatt tattcatggt tggggatgta aagcagtcta tttatcggtt ccgtttagca
      601 gaaccaacgc tatttatgac gaaatatcaa acttaccaac aagatggaaa tggaagcgga
      661 atacgtattg atttgtcgca aaactttaga agtagaaaag aagttttaga tgcgactaat
      721 tttatatttc atcaattgat ggacaagcac attgctgaaa ttgactatga tgcagcggcg
      781 gaattaactt taggcgcaag ttttcctgaa acgactgata tggcgacgga actactgcta
      841 attgatatga agtctgtgga gagtgaaact gaagatgaat tgtcacctca agaattacaa
      901 aaaaatcaag tggaatcacg tgcaattgca atgaaaatta aagaaatgat agacaataag
      961 tttcctatat ttgataaaaa aatgaaacaa aacagaccga ttcaatatcg agatatagtt
     1021 attttagcta gggcgatgac aagcgctcca gatatggaag aagcaatgaa agttcaggat
     1081 atcccttttt acgcgaataa caattctggt tattttgaaa caacagaagt agctacgatg
     1141 attgcactga tgaaagtgat tgacaaccct taccaagata ttccgctcgc tgctgtttta
     1201 cggtcaccca taatcggttt aaacgaagaa gagctaggac aagttcgtat ggcgaaaaag
     1261 aatggttatt tctatgatgc attgttaaca tacaaagata caaccgtttc ggaaactgca
     1321 gataaaatga gtgattttat tcaacagtta aataattggc gtgagttatc tatccgggaa
     1381 aacttaacat cattaatttg gcaaatctat caagaaacta atttttatga atttgttggt
     1441 ggattaccgg gtggcaaaca acgccaggct aatttacgtg cgttatatga ccgagctaat
     1501 caatacgaaa aaacatcttt tcgtgggttg tttcgctttg tccgttttgt cgaacgctta
     1561 gaagttcgag gcgatgattt aggaaccgca aaaacacttg gtgaaaaaga agatgtcgtt
     1621 cgtatgatga caatccatgc aagtaaagga ttagaatttc cagtggtcat tgtctctggg
     1681 ttaagcagga aatttaatat gcgtgatatt tatagcaaaa cacttttaga taaggattac
     1741 ggttttgcat ctaattatcg agatatagag aaaatgattg tttatccaac aattatgcag
     1801 caagcaatga aacaaaaaaa atctcgagaa atgatcgcgg aagagatgcg agttctttac
     1861 gttgctctta ctcgtgcaga agagaagtta attttgacag caacggtgcc tgattttgaa
     1921 aaaacaagta agaattggtt acaagttgca aaagaaaaag agactatttt acctgcatcc
     1981 acaagagcta aagcgaaatg ttatttggat tggataggaa acgccacaat tagacatcct
     2041 aattttaaag aattattgtg tgaggaaatg atccaaacgc ttccgacaga tatgaaacta
     2101 cagattgaaa taaaaaccaa ggaaatgttt ctaactaatg aattggaaaa gacagaaacg
     2161 gttaattggt tggacaatat aaaagaacat caaccaatac ctgtcaaaag cccttataag
     2221 gatgaaattc agcgatatat gaactatgag taccaaaatg aagaggcaac agaaattcgt
     2281 gctaaacagt cggtaacaga gctcaagcgg caattttctt tgcaagatag ttggagtgat
     2341 actacacttt taaaagaatt tcaaaaagtt tcattagaca gacccaaatt tttacagcaa
     2401 aataaattat ctgcaacaga aattggcacg gcaatgcata cgctaatgca agcagtttct
     2461 ttagaacatc aaccgacaaa ggaagatttg gaacagcttt tacaaacaat gcgtgaaaag
     2521 gatatactaa cagaagcaca acttaaagca atcaatatta aacaagtgct aggctttttt
     2581 gaatcgcaat taggaaaaac tatgttgcag aaaaaagatt tagtaaaacg tgaagtgcca
     2641 tttagttatt tacttcctgt atctgagtta tacgaaaaag ttgatataga cgaacgtgta
     2701 cttatccaag gtgttgtaga tagcatgatt gaagaagaag aaacaattac tttgattgac
     2761 tataaaacag ataaaataga gggtaggtat tctaattggg aagctgctga aaaaataatg
     2821 aaagaacgat atcatattca aatcaaactt tatgcaaaag cgattcaagc gataagtggt
     2881 aaaaaagttg atgcagctta tttatatttc ttcgatggac aacatatatg tcaaataaac
     2941 acaaaggaag gtttttaaat gaaatggttg agttatcagc atgagggcga ttttaattat
     3001 ggcattttaa cacctgaaaa taaaattatc cctgcacaaa caattttttc gaatccacct
     3061 gctactcttt tagactttat caaagaaaag ccgcttgtcc ctgaactaaa aggaatcaaa
     3121 ggggatattg atttagctga agtagaaatc caagttccta tcaccccacc aaataatatt
     3181 attgcaattg ggaaaaatta ttataatcat gtgctagaga tggggagcaa agaagacgtt
     3241 ccagaacata tccttgtatt tacaaaaagt gctaatagtt tattgccgca taatggcaaa
     3301 attgagctac atcaaaacct aactagtcaa ttagattatg aaggcgaact cgcaataatt
     3361 ataggagaaa aggtaagaga tttatccgag caagatgcat tatccgccat atttggattt
     3421 actattttaa atgatgtaac agctcgggat cttcagaaaa aacataaaca attttacctt
     3481 gggaaaagtc ttgatgccag ttgtccaatg ggaccttatg tgctggaaaa caatggaagt
     3541 aaagaagttg tttttcatat tgaaactaag gttaacggtg aaataagaca gtctgactct
     3601 acagataaat gtatatttaa tttagctagg attatttctg atttatcaaa agggcataca
     3661 ttgttgcctg gggatgtgat agctacagga actccaagtg gtgtggggaa aggcatgaca
     3721 cctccaactt ttctgcaagc tggagatgtt gtcgaaatta ctattgataa aattgggaca
     3781 ctgactaaca aagtaagaaa atcttaataa gaaagaggga tgtattatgt ggggttatat
     3841 tcatttgatt tcatgggtgg ctattgttgt actaacagtt acagctttac tcatttattc
     3901 gaaatcgaca aaaagtttta caatgttgca aatgatcaat cgagtttttt atattctggt
     3961 tattttgagt ggaattatga tggtcaaata cagcatagag caaagttgga ttctggcaat
     4021 atttaaaatt ctgatgggaa tcattgtaat tggtgtagtg gagatgctac ttagttacag
     4081 gaaacaacaa aaaccaacag gaatgttttt gatgattttt gttattgtcg tagtgattac
     4141 catctcatta ggcttctatt tatcaggcgg atatccatta tttaattaaa aatcaaaaaa
     4201 ataataaaaa agacttctct tttctctaga aagttggtat gttatgttag ggccaaaaaa
     4261 ggagagaaga aaatgagttc aaaaatagta tataaagagt atgctaaaaa aaccgccatt
     4321 gcaataatag cagcactttt aaacgcaata ggcatgaact tctttttaat accagcacaa
     4381 gtttatgcag ctggattaaa tggggttgca caactaggtt cagacatgtt acgagattca
     4441 atgaatattt ctatttcaac aggactactt gttctgttat taaatattcc agtggcgatt
     4501 ttagggtggt taaaagtagg aaaatcattt actgttttta gttttttaac agttgctttt
     4561 atgtcctttt tcttgattgt tatcccagag gtgcaagtat ctagtgatat tttgcttaat
     4621 gcgatttttg gggctttaat tgcatctgta ggtattggtc tggctttgaa attcggtatt
     4681 tctactggcg gattagatat agtagcaatg tatatcacta ttaaaacagg gcgttctttt
     4741 gggaaatatt tcttgctttt aaatggagtt attataattg ttgcaggttt tgcatatgat
     4801 tggacatttg cgctatacac gctcatttct ttatatgttc agagtagagt tattgacatt
     4861 attcatacaa gacatcagaa gctgactgtc atgataatga cacaacactc tgaaacagta
     4921 atcaaagcaa tccatgagaa catggtacga ggaattacag ttgtggatgc gatgggtggt
     4981 tattcaaaag aagacgtagc aatgctgatt atggtgatta cgcgttatga actatatgat
     5041 attacgcaca ttgttggcga gtttgactct aaagcattta ttaatgttat ggagacctca
     5101 agcgtattcg gtgattttcg ttcagaagca gatcaaaaat tagcaatggc gatgtataaa
     5161 aataaaatga tgtaaaaaag ctgcaaagta atggctcttg aatcaaaaat tagtattcct
     5221 aacttttgta agaccttact tgcagctttt tattataagt ttaaattttc ttctaaatag
     5281 agtgctatac catcatcttg attagaagca gttaccacgt ttgccacatt tttaacagac
     5341 tcggcagcat ttcccatagc aaccccaaca ccagcgtaat caagcatttg taaatcattc
     5401 gtttcatcgc caaatgcaat gatatcttta cgatcaaagc cgagtgtttt agccgctgct
     5461 tgcacgccaa tagctttatg aataccgaat ttaataattt caacggctgg ccaagcagat
     5521 gctccccatg tatggtgaga aataacgccg gaaagagatt catccaagtg tttgctaatt
     5581 aaatcaagtt ggtcaatttt tccaaaaaac agtaaagaag tagcatctga tttaatagca
     5641 tcacggatgt ttccaaagac aatattttca gtgcctaagt ggaatgtttc aggaacgctg
     5701 ttgtttcgtt cttttaagaa gacattatct tgcacctctg ctgcgatatt atctaatgaa
     5761 aagccgtttg aaaaatcgag taactcatga acaacttgta aatcaatggc atgatgatag
     5821 ccctcagcga aggtagtaag tctaggatgg tgatagacgg caccgttgaa atttacaatc
     5881 ggcgttgtta atccgagttc atggtaataa gagccactta ttcgatatgg gcgtcccgtt
     5941 gcaatcatta cttcgtgacc ggccatgcgg gctttttcta aagttttttt tgtatgggag
     6001 gagatagtta aatcatctct aagtgttgtt ccatcaagat ctagtacgat taatttttta
     6061 gacatagttt gctcctttaa ttcatatggt tggttcaaag ctgccccttc atgctaaaat
     6121 aagggcacac atcaatgata gacgtttatc acaaatttgt aaatgattcc gacctttaca
     6181 gtagcttaat aaactcaata gaaatgaggc ttcacaatga ttcaagtgga aaatgaacaa
     6241 attgcgggaa taccagtttt acatattagt aatagtgaaa atgctgatca aatgttacca
     6301 acgattattt tttatcatgg atttacttct caaaaagaat tatatttaca ttatggttat
     6361 ctacttgcgc agcgtggctt tcgagtagtt ttgccggatg caaagttgca tggtgagcgt
     6421 ctacaaggag cgaatccgga agatcaggct acattctttt gggatgttat tgagacaaat
     6481 attatagaat tccctctaat tactaatgaa ttaattaaag ctggaaaaac ggatgctaat
     6541 cgtattggag ttggcggagt ttccatggga gctattactt cgcttggcct tcttgggcaa
     6601 tatgaaaata ttaaagtagc ggtcagttta atgggaagtg cttattacgt tgattttgct
     6661 aaggagttat ctaaatatgc attggcgcaa gggttaactt tcccgtatga cgtggatgag
     6721 cgaattttaa ctttacaaaa atatgatttg acccaaaata tcaccaaaat aaataaccga
     6781 ccattgttac tttggcatgg caaaaaagac gatgtggtac cttttgcgta cagcgaaaag
     6841 ttataccaaa cattagtaga agaaagcttg gcagataatg tgcaatttat catcgacgac
     6901 aatgcgaaac acaaagtttc ggtcgaagga atgctacaag gtgtaagctt tttcgagaaa
     6961 ttcttataat gaaaatcatt ctcatatatg atacaataaa tgtacaaaat ggcaaaaagg
     7021 aggcatatgc ttcatggatg agcaactgaa agaaaattta atgggcgcac tagaacaagt
     7081 tatcgatcca gaacttggaa ttgatattgt gaatattggt cttgtatacg atgttgaatt
     7141 agatgatgac ggcctttgca cagtatcaat gacgcttaca acaatgggat gtccacttgc
     7201 tggtattttg actgagcaag tacaaatggc acttagtgat attccagaag tgaaagatac
     7261 aaatgtaaat cttgtttgga atccaccttg gactaaagat cgtatgtcac gctatgcaaa
     7321 aatagcgctt ggtatacgtt gaattaaata aaaataagca ggtaggacgt attttgcgtt
     7381 atacctgtta tttttatatg actgaataga ggattaaaac gatgaattat gaaatgataa
     7441 gtgattataa agataataaa atgtatcgtg atagttttaa taaacttgcg gaaagtacat
     7501 ttgacattaa ttttgaagaa tggtttagaa gcggtttttg gaatgacaag tatgtttgtt
     7561 attcttatat agataataat gaagttatct cgaacgtctc cattaacaaa atgaatttaa
     7621 tttatcaagg ggaaaattat agtgcgttac aaattggaac agtaatgacg catccgaatt
     7681 accgtggaca gggtcttgct aagaatttat taaatcatgt gatagctaag tatgaagacc
     7741 agtatgattt tctttattta tttgcaaatg atactgtatt ggatttttac ccgaaatttg
     7801 ggtttgaacg tatagaggaa agtagtttta ctgtagatgc ttgcaatttg aaaaaaaaag
     7861 ctagtaaatt aaaaaagctg aatcccgata ataaaacgga ttttcagcta attagtcgta
     7921 ttgtatccaa aagagcacca ctttctaaca tattagatgt caaagaaagt gaagatttac
     7981 tgatgtttta tgtattaatt gcgttaaaaa acgagcttta ttatttggaa gaattagatg
     8041 taattgttct gatggaacag gaaggtactg atctatatgt actggatatt cttagtacaa
     8101 aaaaactaga tgtggtggaa gttctaagtt atctttctac caaaaaaatt gaaacaatcc
     8161 atcttctttt tacgccagaa aaaagcaaat acattgatgc ggcttatatc attgaaacgg
     8221 aagatatgtt gtttgtgcgt ccaaatgtgc ttacaagtga aaattacttc ttatttccag
     8281 cgacctctca cgcttgattt tcaagtttag taagtcgttc ttcgatacgt tgttgatgtt
     8341 tgtattgttt aatgattctt ttggcaagtt gcaattccgc ttgtgccgtc attaagtgat
     8401 cctgcccatg aataagtaaa aaggaaggat gagctaccgt ttctgagtcg cgaatggata
     8461 ctaattttgt ttgccaaata tgaccttctt ggaattgatc ctgtgcgatt tgcagatgtt
     8521 tatcggcttc atcaaattga tacttttccg caaaatcaat tgctttgtat gcttcttttc
     8581 gtgtgtttcc gccatgcaaa atgagtttta caacagcttc ttctacttga atttccattt
     8641 ttccacccca acagttgata gttttctttc attgtagcaa atgcctgaac ggtatgacaa
     8701 taaattagca ataaatcagc ctatggaacg atgtgtttca tggagcttag cgtataatag
     8761 gcaatagaaa aggtgtggag ggattcaaat ggaagaacgt ttatacgaac ttgaagataa
     8821 agtacaagac cttgagcttg aagtgcatga tttgcgtgat agaattcaac tgctcgaaga
     8881 caaaccagct gctcgctcta gcttacttgg tcataatgta tgggtcttaa ttccattagt
     8941 cgctattatt tcttggatgg ttgtagaaat ttttagttga aggggacctt taatggtttc
     9001 ctttttattt gtaatatagt aatttttata cagaaaataa caataaaagt aagccagttc
     9061 tcatctttct tatctttgtc acaaaaaatc tatatttatt tacttgcttt tttcaagaac
     9121 aatagtaaaa taagttatag gatagagttt tacctcgatg aaagtttcat ttttattaat
     9181 gtgattttca tggggataag accctatcat ggttataatg acttttggtg tatccatctt
     9241 ccaatagaat ggcaactagt cagacatctg tttagacacc aaaatcatta tttgttttca
     9301 ttcatctcat tggccgtgta gttcatgtct atgcctcatc ccgttatgca tagacgcccg
     9361 aacatgatgg caacgctgga aatgtttatt tcgagcgtct ttttttgtct tcttttatag
     9421 gcggaataat ttaataacat tctagttatt gttatactgt agaagaggat aggaggagat
     9481 ttatatgact ttaaaaggta aaaaagttat tgcacttgtc agtgaagact ttgaggattt
     9541 agagctttgg tatccagtgc ttagattgcg cgaggcagga gcttcggtgc atctagtggc
     9601 tgaggaagca aagaaagttt atcacggtaa gtacggagtt cctgttactt ctgactatga
     9661 ttttgattct gttcgcgcag aagattatga tgggatttta gttccaggtg gctggtcccc
     9721 agacaaatta cgccgttttg atagcgtact aaatttggtt cgtgcgtttg ataaggcgaa
     9781 aaaaccaatt ggacaaattt gccatgctgg atgggtactt gtttcggctg gtattttaga
     9841 aggcgtgaat gtaacaagta caccgggaat taaagatgat atgacgaatg cgggagctat
     9901 ttggcataac gagcctgttg taacagacgg ccatattatt tcgagtcgtc gcccaccaga
     9961 ccttccagaa tatttaccag catttatttc cgctttagaa gattaaaaaa agaagcattt
    10021 ccatattttg ggaatgcttc tttttagttt aaaagtaaaa agttacgata aagccgataa
    10081 aactaggaat tgctgcaact aaaagcagga tactccagcg taattggctt tttcgacttg
    10141 ggtttccact acggccacca aaggatacga atgcggatag aataatggat gcaaagacaa
    10201 tgatagtcgt tacaatggaa tataaagtgg atacagtgta gtcaggcatc aaaaagcttg
    10261 ctagaaaaac aacaacagca agtgcgacac cagcgagcag tgattttaaa aacacgacaa
    10321 gttcaactca tttctaatta gtttctctct tctttatagc aaacgagcgg gtttttgtcc
    10381 aataaaaaag cgcctagctg agttcagtag acgcttttat tcattgatta atgtggtaaa
    10441 aatgctacga gaatgaagaa taatacggcg ataacgatta ggaaccagtt aagttcacgc
    10501 catttaccag tgaatacttt taatactggg taagaaataa atccgaatgc taagccgatt
    10561 gcgatgcttg aagtaagtgg catagctaga ataactaaga aagcagggaa tgcttcatct
    10621 aatgtatccc agtcgatttc tttaacagca ccaatcatca tactaccaac aactataagt
    10681 gctggtgcag taatagcaga aattccagag acagcaccaa caagtggagc gaagaatgct
    10741 gataccatga acaggatagc aactgtaagt gtagtaagac cagtacgtcc accagttgca
    10801 accccagcag aagattcaat gtaagcactt gttggtgttg taccaaacat cgaaccaaca
    10861 cttgttgcaa ccgcatcagc cattaaggct tgtttcgcat ttggtaatga ctcacctttc
    10921 attaggccag ctttttttgc aaccccgatc attgttccgg ttgtatcaaa aatcgttata
    10981 agtaagaagg acaggacgac agcatagagc ccgtaactca tcacatcacc aaaagcgtga
    11041 ataggattag tgaagacgaa ttctggcatt ggcggaagtt taacgatacc ttctgtaaat
    11101 ttcagttcac cagtgataaa agcaatgata ccagttgcaa tcatcccaat aaataaagca
    11161 ccttttacgt ttaaagcaag caagattaaa gtgattaaaa gaccaacaat agctaaaata
    11221 gcttctttgg aatgtaaatc acctaaacct actaagttag aatcgttaga aacaataatg
    11281 cctgtcatac ggaagccaag gaaagcgata aataaaccaa taccagcagt aatcccagct
    11341 tttaaattat gtggaatagc ttcaatgatt ttttcacgaa gcggtgttaa agataataat
    11401 aagaaaataa tacctgctac aaagaccgca gcgaatgcga ccgaataatc tagtttttga
    11461 gttgtaacta ctgtgacgaa gtaagcgttc ataccaagtc ctggcgcaat cgcgattgga
    11521 tagttagcga aaattgccat ccataatgta ccgattactg ctgaaatgat tgttgccatg
    11581 aatacagtgt tgaatggaac acctgctgcg gaaagaattg cggggttaac tactacgata
    11641 tataccatcg ttaggaatgt agtaaaacca gagataactt ccgttttaac atctgtgccg
    11701 tttgccttta attgaaacat gcgtgtgttt cactcctttt ttaaaatcat gcttaatggt
    11761 aaataacgaa cattaaaaac cacaaataca atattattcg ttttttacta aaaaagcaac
    11821 cctttttcga agatttctta aatagtttat ctatgttaca atgaaaatat cacttatact
    11881 aggaggatgc atgtgaaggc agttgttttt gattttgatg gaactatgct tgatacggaa
    11941 aatttatggt atacagagac aatgaactat ttgaaagaga cgtacgatat tgatttacca
    12001 gatgaaattt atcaacaaat tatcggtaca agtgaagaac caattattcg ctatatgatg
    12061 gaagcaacga acggggcttt tgataaagaa gcttttttaa ctactgtggc ggaagcttgt
    12121 catcttggtc aacaatcact tggctttcgt gatggtttta aagaattttt tgaacaagta
    12181 aaagcgaatg attttaaaat aggccttgca acgagttcgg gatttgactg gattgggcct
    12241 acgctggatc gtctgggcat tttagctgat tttgagacga tacaaacggc agaccatgtg
    12301 gatgaaatta agccacatcc ggcactttac ttacaagcag tagaagcgct tggggttaaa
    12361 ccagaagaag caattgctat agaagattcc aaaaatggtg cgctatcagc aatgcaggct
    12421 gggttaaagg tgtatatcgt accgaatgaa gctacaaaaa acatcacttt tccaaaagag
    12481 gcgacggttg tttcttcttt tgcagaaatc aatttaaaat agaaaaaaga gcaaacttgc
    12541 ctatgaagcg agtttgctct ttttgttaaa aggttaattt ggctagacgg ttaaatgctt
    12601 cttctagcac gctaatgtct tgggttgcag ctaggcgaac ataattatca ccagattcac
    12661 caaaagctag cccaggaatg acgaggactt gtgtttcttt taagacatat tctgtaaatg
    12721 aaacggaatc catatttgtt ttagaaatat taataaaggc gtaaatcgaa cctttaagtg
    12781 gatgtaaaga aagatatggg atttcttcca cccgttttgc gatgtattct aggcgttttt
    12841 ggaaagtttc tgttactaaa ggaattagtg tctcagaatg atttaatgcg taaatagcag
    12901 ctctttggga cggtgtagga gctgaataag taattccttc attaataatc tttgcagctt
    12961 cgtttaaata agtaggagca atcatatatc ctaagcgcca accggtcatt gcgaagtttt
    13021 tagacatact accaaatgta atcgtgtgat ctggcgcgaa tttggccatt ggtacgaagt
    13081 cttcataaaa actaaaacca tcatatactt catccgacaa aataaaaaag tcatattttt
    13141 tcgctagatt agcaattttt tcaaaggttt ccggtgaaaa aacagcaccg gtgggattat
    13201 taggtgaatt taaaattaaa gcttttgttt tatcagtaat ggcagcttct aaaatatcga
    13261 cattaatcgc aaaatcgtct ttctcatagg ttggaataat gataggagta ccaccggaat
    13321 ttaacacttg atctttatac ggggagaagt agggttcgtg aataatgact tcatcgccgt
    13381 cgtcgagaat ggtttgcaag gttaggtaca taccatgaag cgcgccaact gtagcgcgga
    13441 tttggctgcg ttcaaaagac aaatcataat tacgactaaa ataaccacga atagcatcta
    13501 tgagttctac atctccacca gattctgtgt attttgtatg gcctgcccgt acgtcttcaa
    13561 aagcggcatt aataatcgat tcatccgtaa ttaaatcagg atcaccaatg gataaatcga
    13621 gaatatcagg cattgttttg gcaagtgtgc caatatcagc aagaatgttc acaggcattt
    13681 gttgatgttt tttagcaatt tttgagttat tcatcatgta taattagctc cttttttcta
    13741 taagtgcaga taaacgcctc acctaaaata ggcgagacgt aatctttggt tatgctaaaa
    13801 cttttcctaa aaagtctttt gtacgatcgt tttgcgggtt cccgaatact tcttcgggcg
    13861 tgccttgttc ttgaatcacg ccagcatcca tgaagacaac gcggtcggca acttctcttg
    13921 cgaagcccat ttcgtgcgtt acgacaacca tcgtcatacc ttctttagca agcgacttca
    13981 taacgcttaa tacttcaccg accatttcgg ggtcaagtgc ggaagttggt tcatcgaata
    14041 gcattacgtc aggattcatt gcgagtgctc gggcaatggc tacccgttgt tgttgtccac
    14101 cagaaagttg ggaagggtag ctagttgctt tatcagctag accgactttt tccagtagag
    14161 aaagcgcgtg ttttttcgca gctgcactat cttcattctt tactttcata ggcgctaaca
    14221 ttaggttttc aagaacattt ttatgcggga ataagttgaa gttttggaaa accatgccca
    14281 ttttttgacg aagttcgttg acgttggttt gttttgccat taggtctttg ttttcaaaaa
    14341 gaatcgtgcc ggttgttggt tgttctaata agttcaggca acgtaagaaa gtactttttc
    14401 cgcttccgga agggccgata actacgacca cttctccaga tgcgatttca agatcaatac
    14461 cttttaagac ttctaatttg ccaaaatgtt tgtgtaaatt tttaatatca atcacttgtt
    14521 ctcattctcc tttcagcaac acctagtagt cttgataagc taaatgttag tacaaagtaa
    14581 attaatgatg tgataattag tgggataaat ggcttgaagc ttgcgccttg gactacgccg
    14641 gtcataaaca ttagttctgt tacaccgata acggatacga tggaagattc tttaataaca
    14701 gtgacgaatt cattcccaag agcaggaaga atatttttca cggcttgcgg taagatgatg
    14761 taacgcatgc tagcgccttg tgtcatacca agggaacgag ctgcttccat ttgacctttg
    14821 ttgacagcag aaatacctgc gcggataatt tcagcaacat aagcggcact gtttagcgat
    14881 agggcgatac aaccagaaac aaaggcggat acgtccatac cgataatttg agttccgaaa
    14941 aagacgatga aaatttgaat tagaagtggc gtaccacgga caaattcaat ataacatgct
    15001 gctggccagc gtaaccatct tgttttcgcc agtttcatga gcgctagtaa tgagccgaga
    15061 atggcaccac ataatacgcc aatagcggca agggcaatag tgattaatgt accagtgata
    15121 aagtaattac catatttctc gtaaaagcta ccatcttgga acattaattt attggcttct
    15181 ttttgatatt ttttcagtaa gccggtatct tgtatatctt taatagaagc gttgactttt
    15241 tcttgtaaag ctgtagaacc ttttggcatt gcgatggcgg tttctttgct accattagca
    15301 aatttgatat ccgccatagc gagtgtctta tcttgactaa tataagcttc agcaactgga
    15361 ccttctaaaa caaccgcatc gactttgttg cttttaaggt taagaataag gtccggtact
    15421 ttttgaaggg aaactacttc tgaaccaact agctcatttt gagctaattc ttcttgtgtc
    15481 gtttgttttt gggcaccaac tttcacgcca ctaaaatcat tcacacttgt aaatttatct
    15541 ttatctgtct ttctaatcac aacacgttgc tgaacgaaca tgtatggatc agagaaatcc
    15601 acttcttttt gacgttcggg tgtaggtgac atcccggaaa taatcatatc aatcttgcca
    15661 gtttttagtg agccaagcaa gctgtcgaaa ttcatttctt taatttctaa tttaacatct
    15721 aaatctttgg caattttttc cgcaatactt acatcaaaac caacgacttt atctttaccg
    15781 tcgattgttt gatgaaattc atacggtgga tagtcagcgg aaaggccgac cgttaaaaca
    15841 cctttttctt gaattttagc taaagtttga tcttctgtat cagcggcgaa cacagttgtg
    15901 aagccagaaa atacaactat aaaaacaagt aaaattgctg caa
//
LOCUS       DASDYO010000069        15870 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.069, whole genome shotgun sequence.
ACCESSION   DASDYO010000069 DASDYO010000000
VERSION     DASDYO010000069.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15870
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.069"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(113..1315)
                     /locus_tag="U0290_001800"
     CDS             complement(113..1315)
                     /locus_tag="U0290_001800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464596.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FtsW/RodA/SpoVE family cell cycle protein"
                     /protein_id="HEM2301841.1"
                     /translation="MFKRILKSYDYAFIAVFIVLCLFGLIMIYSASWSLAIGKGLPAD
                     YFYARQVKNFIISFIFFILFALLPFKFYQNNKVLMLIVFGSIGVLLLIFLVGKTVNNA
                     NSWLVLGPRSLQPGEFAKLAVIIYMSAIYAKKQSYIDDFNRGVLPPIFFLAFVCFLIA
                     IQPDTGTAFIIFLVGCCIIITSGMRLRTIMKLIGIGMGIIIGLTLILFALPDSVRNEI
                     VSPTKVARITTFMNPFEYADKEGHQLINSFYAIGSGGVSGQGLGESVQKLGYLPEAHT
                     DFIIAVVAEELGVFGVMFIILALFFIIFKTITTGLRAKDPFASLMCYGIASLIAIQAF
                     INLGGASGLIPLTGVTLPFISYGGSSLMVLSMMLGIVANISMFTKYQRVYKADGSTRE
                     LPKKQKRR"
     gene            complement(1497..1778)
                     /locus_tag="U0290_001801"
     CDS             complement(1497..1778)
                     /locus_tag="U0290_001801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaN family protein"
                     /protein_id="HEM2301842.1"
                     /translation="MANKKIDHREEAVELLKQDAKRILQLIKVQMDNLTLPQCPAYEE
                     VLDTQMYGLSREINFATRLGLIEPEEGKKLMSTLEKELSTLHELSMSKK"
     gene            1984..2214
                     /locus_tag="U0290_001802"
     CDS             1984..2214
                     /locus_tag="U0290_001802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlaI family protein"
                     /protein_id="HEM2301843.1"
                     /translation="MNAKCILCERVDELDNREFKTKQLRNKPIRMYLCPECEHRVAIN
                     TISRVNSGHFNFHKPVVMSNSELKNLIESAGK"
     gene            complement(2246..3124)
                     /locus_tag="U0290_001803"
     CDS             complement(2246..3124)
                     /locus_tag="U0290_001803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5068 domain-containing protein"
                     /protein_id="HEM2301844.1"
                     /translation="MMKKRIIILAVLVVLLIGGVVIGVYASGNSAKDNNESKTTAKKA
                     TSTPKKAIDTEKKETTTKEATTKDSVTDDKGVVTKGSSDVEKNAPAKNNSSATDKSNS
                     PTTPAFSLSSTGFKTSNVSSVLGGTVTTTYLSSAPSFEKIFENLTIEVNQYKVEHVVG
                     ANKAVSASNPESYLANKNGYVITLDISIKNTSAKDKMYKADQITLIGANEFVGGSLDN
                     FVPSNFHLIGSKADPNIFTAGKTARGLLTFTMTEAVYNDLAADSKIGVPNPDKFDASV
                     SEANAGDDVVASFPVK"
     gene            complement(3299..5137)
                     /gene="typA"
                     /locus_tag="U0290_001804"
     CDS             complement(3299..5137)
                     /gene="typA"
                     /locus_tag="U0290_001804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464592.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="translational GTPase TypA"
                     /protein_id="HEM2301845.1"
                     /translation="MNLRNDIRNVAIIAHVDHGKTTLVDQLLRQSGTFRDNETVAERA
                     MDNNDLERERGITILAKNTAIKYEDTRVNIMDTPGHADFGGEVERIMKMVDGVLLVVD
                     AYEGTMPQTRFVLKKALEQNLTPIVVVNKIDRDFARPEEVVDEVLELFIELGANDDQL
                     EFPVVYASAINGTSSYDSDPAEQKETMKPLLDTIIEHIPAPVDNSDEPLQFQVSLLDY
                     NDYVGRIGIGRVFRGTMHVGQTVALIKLDGTVKQFRVTKMFGFFGLKRDEIKEAKAGD
                     LVALAGMEDIFVGETVTPFDHQEALPLLRIDEPTLQMTFVTNNSPFAGREGKHVTSRK
                     IEERLLAELQTDVSLRVEPTASPDAWVVSGRGELHLSILIETMRREGYELQVSKPEVI
                     IREIDGVKCEPVEDVQIDTPEEFMGSVIESISQRKGEMKNMINDGNGQVRLQFMVPAR
                     GLIGYTTDFLSMTRGYGIINHTFDSYQPIQKGRVGGRSRGVLVSMETGKSTTYGTMQV
                     EDRGTIFIEPGTDIYEGMIVGENNREGDIAVNIVKAKQMTNIRSANKDQTNVIKKPRH
                     LSLEESLEFLNEDEYCEVTPESIRLRKKILNKNEREKAAKRSKTAE"
     gene            complement(5329..6102)
                     /locus_tag="U0290_001805"
     CDS             complement(5329..6102)
                     /locus_tag="U0290_001805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464591.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inositol monophosphatase family protein"
                     /protein_id="HEM2301846.1"
                     /translation="MDSEKIDYLARLWIMEAAAKIKQSFKETLDIDVKSGRNDLVTNM
                     DKETEAFFVQQIKDHFPDHRLFGEEGMASDVTDLDGVVWILDPIDGTLNFVEQQRDFA
                     ISLAVYEDGIGQLAYIYDVARDELYFGEKGKGATVNGRTIPKLDPAIDLKDTLLIANL
                     SVTRKFPTMWEAVKASRGLRLHGAASLEYMDVATGRAGAYLSANLAPWDIAAGKIIVE
                     ELGGKVTRINGEKINMLEKGSSIVASPKIHQTLLDNYLP"
     gene            6233..6847
                     /locus_tag="U0290_001806"
     CDS             6233..6847
                     /locus_tag="U0290_001806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464590.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YktB family protein"
                     /protein_id="HEM2301847.1"
                     /translation="MTFKGFSKKDFKTMQIPGLEARMNGIQTDIQPKFRAVGEELTTY
                     LSAKLGDEMFLHIARHQRRSVNPPESTWLAICHDKRGYKKHPHFQVGLFDNYLFIWLA
                     FIYENEESAKIANRFLKEKKLLADLPDNFAISPDHTEEKTYPVHDGQLKATLERFRDV
                     KKGEFLVGKIYLPDDSHLSPGKDFIKEAEMVLDELIPLYKASLQ"
     gene            7048..7992
                     /locus_tag="U0290_001807"
     CDS             7048..7992
                     /locus_tag="U0290_001807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464589.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEM2301848.1"
                     /translation="MHQIFKSDENGKLIELEEVTRNCWINIVAPTSEEINKIADNYEI
                     PLEFLEDPLDKDESARIERDDDSDSVLIVCDFPVVDEDDIHYASFETIPMGIIITKDY
                     FITICTIDSSIVQSFIRNRIKGFYTHMKTRFALQILYMISTTFLRHLKRLNRQTDEIE
                     KELHESMKNKQLYDLMGIEKSLVYFVTALKSNKVVLDKMMRQNIVKMYEEDQDLLEDV
                     IIENRQGIEMAEVHSNILSGMMDAYASIISNNMNIVMKFLTSFTIILTIPTMVFSFYG
                     MNVKLPFMNTPMAWMLTLGFAFGIAGALAIVFWRRKFF"
     gene            complement(8050..8580)
                     /locus_tag="U0290_001808"
     CDS             complement(8050..8580)
                     /locus_tag="U0290_001808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DsbA family protein"
                     /protein_id="HEM2301849.1"
                     /translation="MDISQIKAEVVTPETGIHVGDQTAPVKVMSFVNLRCPFCREWNE
                     KSKDVLTEYIQAGKIELIIKPFDKEKESLQRGNVTHRYLDYSKPEETRETINKIYSKQ
                     DEWGSLTLPEVATYMESELGLTEQDNKAASEKIVAEANAANVVFVPTVIVGEHIFDEH
                     ISPEELRSLLDGELAK"
     gene            complement(8602..8874)
                     /locus_tag="U0290_001809"
     CDS             complement(8602..8874)
                     /locus_tag="U0290_001809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UPF0223 family protein"
                     /protein_id="HEM2301850.1"
                     /translation="MEYSYPLNPDWTTEEMTIVVQFLEAIERAYEKGIDTLELKEKYR
                     AFKQVVPAKGEEKRIGIDFEKASGYSAYKVMQLVKNATTSKIKMQP"
     gene            complement(8874..9827)
                     /locus_tag="U0290_001810"
     CDS             complement(8874..9827)
                     /locus_tag="U0290_001810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="malate dehydrogenase"
                     /protein_id="HEM2301851.1"
                     /translation="MPSKKKKIVVIGRSNLQNLYIHTVLFKKIPAEIYLIDDQAKTSV
                     QDFDYASYYHADATIHAGTFNECRNADIVVFFQEEMSNQLVSKEDNVTLIKEKVKKMM
                     ASGFRGIVLVATAESNVVAALIKRFSGLPVNQIITLGTMLATSYFQVEIAKLFKISPK
                     NVHGYIIGDNAEDVIPVWSRAFLGGKPILSYLAEEQKRISAEDLQNLTKMITKIPDFP
                     FENKDGCSFRFSTVTVLAELTEVVLRDEARVITVGVEVKDAYGLENPVFISVPAVIGA
                     EGVRELLELHLSDDEQKELKQIATKTTEKLEELQLNKGGIS"
     gene            complement(9956..10267)
                     /locus_tag="U0290_001811"
     CDS             complement(9956..10267)
                     /locus_tag="U0290_001811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003746788.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301852.1"
                     /translation="MEKQTATWKKALFWFAYVVAGICFLLTIVAFIVGFIHHMHDTGG
                     WRSVIQILETPITGFVKMTGGYIGKGILEVIILIIVSYVLPIFFCFATHYLKVKRREM
                     A"
     gene            complement(10454..11857)
                     /gene="lpdA"
                     /locus_tag="U0290_001812"
     CDS             complement(10454..11857)
                     /gene="lpdA"
                     /locus_tag="U0290_001812"
                     /EC_number="1.8.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyl dehydrogenase"
                     /protein_id="HEM2301853.1"
                     /translation="MVVGDFPEERDTIVIGAGPGGYVAAIRAAQLGQKVTIIEKEYYG
                     GVCLNVGCIPSKALITIGHRFKEAGHSDNMGITADNVNLDFTKAQEWKGGVVNKLTSG
                     VKGLLKKNKVEMLEGEAFFVDDHSLRVIHPDSAQTYTFNNVIIATGSRPIEIPGFKYG
                     KRVLSSTGALALTEVPKKLVVIGGGYIGTELGGAFANLGTELTILEGGPEILPTYEKD
                     MVSLVKRNLKSKNVEMVTKALAKSAEETENGVKVTYEANGETKTIEADYVLVTVGRRP
                     NTDEIGLEQAGVKVTERGLVEVDKQGRSNVPNIFAIGDIVPGVPLAHKASYEAKIAAE
                     AIAGEKAENDYTALPAVVFSDPELATVGLTEKEAKEKGFDVKAAKFPFGGNGRALSLD
                     APEGFVRLVTRKEDGLVIGAQVAGMNASDIISEIGLAIESGITAEDIALTIHAHPSLG
                     ELTMEAAELALGRPIHM"
     gene            complement(11862..13496)
                     /locus_tag="U0290_001813"
     CDS             complement(11862..13496)
                     /locus_tag="U0290_001813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydrolipoyllysine-residue acetyltransferase"
                     /protein_id="HEM2301854.1"
                     /translation="MAYSFKLPDIGEGIHEGEIVKWFVQPGDKIEEDESLFEVQNDKS
                     VEEITSPVSGTIKEIKVAEGTVATVGQVLVTFDGVEGHEDDAEEESAAPKAESTESTP
                     APAQASGKGIFEFKLPDIGEGIHEGEIVKWFIQPGDKVEEDQSIFEVQNDKSVEEITS
                     PVDGTVKDILVSEGTVATVGQVLVTFEGDFEGEASHESTPESPAEEAELTNNDATSAP
                     VTGGNGTPSSKKDPNGLVIAMPSVRKYAREKGVNIAEVAGSGKNNRVVKADIDAFLNG
                     EQPAASTTTAQTEEKAAAPKAEKAAAKQPVASSDAYPETREKLTPTRRAIAKAMVNSK
                     HTAPHVTLMDEIEVTALMAHRKRFKEVAAEKGIKLTFLPYMVKALVATLRDFPVLNTT
                     LDDATEELVYKHYFNVGIAADTDHGLYVPVIKNADKKSVFQISDEINELAGKARDGKL
                     TADEMRHGSATISNIGSAGGQWFTPVINYPEVAILGVGRIAQKPIVKDGEIVAAPVLA
                     LSLSFDHRVIDGATAQKAMNNIKRLLNDPELLLMEV"
     gene            complement(13607..14584)
                     /locus_tag="U0290_001814"
     CDS             complement(13607..14584)
                     /locus_tag="U0290_001814"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-ketoacid dehydrogenase subunit beta"
                     /protein_id="HEM2301855.1"
                     /translation="MAQKTMIQAITDALAVELEKDENVLVFGEDVGKNGGVFRATEGL
                     QEKFGEDRVFDTPLAESGIGGLAIGLALEGFRPVPEIQFFGFVFEVMDSVAGQMARMR
                     YRTGGTRTAPITIRAPFGGGVHTPEMHADNLEGLMAQSPGLKVVIPSTPYDAKGLLIS
                     AIRDNDPVIFLEHMKLYRSFREEVPEGEYTVEIGKAAVRREGTDVSIITYGAMVQESM
                     KAAEALEKDGVSVEVIDLRTISPIDVETIIASVKKTNRAVVVQEAQKQAGIAANIVAE
                     INDHAILSLEAPVMRVAAPDSVFPFSQAETVWLPNHNDIIERVKEVIAF"
     gene            complement(14587..15702)
                     /gene="pdhA"
                     /locus_tag="U0290_001815"
     CDS             complement(14587..15702)
                     /gene="pdhA"
                     /locus_tag="U0290_001815"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate dehydrogenase (acetyl-transferring) E1
                     component subunit alpha"
                     /protein_id="HEM2301856.1"
                     /translation="MASKTKKAIIDVKKQFEAVHKQFELVQILNEKGEIVNPDLMPDL
                     TDDELVELMTRMVWTRVLDQRSISLNRQGRLGFYAPTAGQEASQLASHYALEKHDYIL
                     PGYRDVPQLIWHGLPLTKAFLFSRGHFVGNQFPEDLNVLSPQIIIGAQIVQAAGVALG
                     LKKRKKDAVVITYTGDGGSSQGDFYEGMNFAGAYHAPAIFVVQNNKFAISTPREKQSA
                     AETLAQKAVAAGIPGVQVDGMDPLAVYAVTKFARERAVAGEGPTLIETMTYRYGPHTL
                     SGDDPTRYRTKELDGEWELKDPIVRFRTFLEGKGLWNEEKENAVIDQAKEEIKVAIKE
                     ADATPKQTVTDLLKNMYETPTAPIKEQLAIYEAKESK"
BASE COUNT         4597 a         3171 c         2830 g         5272 t
ORIGIN      
        1 ttctaaatat ttaaaacaat atcgaaaaca cgaataaact ggctataaaa cgccaaaaac
       61 atgcggtaaa gcaaaaaaag aaaaagctaa taattagctt tttcttcata atttaacgtc
      121 ttttttgttt ctttggtaac tctctcgtgg aaccatctgc tttataaaca cgttggtatt
      181 tagtgaacat tgaaatattc gctacgatac caagcatcat cgagagcacc attaaggaag
      241 atccaccata actaataaat ggcagcgtta caccagtaag cggaatcaaa ccactagctc
      301 caccaagatt aataaatgct tgaatcgcaa tcagactagc aatcccgtag cacattaagg
      361 aggcaaatgg atccttcgcc ctgagtccgg tcgtgatagt tttaaagata atgaagaaca
      421 gtgccaaaat aataaacatc acaccgaaca cacctaattc ttctgcaaca acggcaataa
      481 taaaatcggt gtgtgcttcc ggcaagtaac caagtttttg aacgctttcg ccaagccctt
      541 gtccagaaac accacctgag ccaatcgcat agaaggaatt aattaactgg tgcccttctt
      601 tatccgcata ctcaaaaggg ttcataaaag tcgtaatacg agctactttc gttggagaaa
      661 caatttcatt cctcacacta tccggtagtg cgaataagat gagcgtgagt ccaataataa
      721 tacccatacc aatcccaatt aatttcataa tcgttcgaag tcgcattcca gaagtgataa
      781 taatacaaca accaactaag aaaataataa aagctgtccc agtatctggc tgaatggcaa
      841 tcaagaaaca tacaaatgct aaaaagaata tgggcggtaa aacaccacgg ttaaaatcat
      901 caatgtaact ttgtttcttc gcatagatgg cagacatgta aataattacg gctaatttag
      961 caaattctcc tggttgaaga gaacgtggcc ctaaaacaag ccaactgttc gcattattta
     1021 ccgttttacc cactaagaaa atcagtaata agacaccgat ggatccaaat acaattaaca
     1081 ttaacacttt attattttga taaaatttaa atggcaaaag agcaaaaaga ataaagaaaa
     1141 taaaactaat tataaagttc tttacttgac gagcataaaa ataatctgcc ggtaagcctt
     1201 taccaattgc taaagaccag ctggcactat agatcataat aagcccaaat aaacatagca
     1261 cgataaatac cgctataaat gcataatcat aagattttaa aattcgttta aacatcggca
     1321 tcgtccaatc cctgagaagt tactatccca tcttgttttc tattcttcct attataaagg
     1381 aaaagacctc caaatgaaaa gaagaatcgc ctccttcttt tggctcattt tttaatcttt
     1441 cgctggcaaa caaaaaaaga tgtcagaaaa aatcagacat cttttcaatt gattcattat
     1501 tttttactca tggacagttc atgtaaagtg gacaattctt tttccagtgt agacattagt
     1561 ttcttgcctt cttctggttc aattagtcct aggcgggttg caaagttaat ttcacgtgat
     1621 aaaccataca tttgtgtatc aagaacttcc tcatatgctg gacattgcgg taatgttaga
     1681 ttatccattt gaactttaat caactgtaag attcgttttg cgtcttgctt taaaagctcc
     1741 actgcctctt ctctgtgatc tatcttttta tttgccatca cagaaccccc tatcatacgc
     1801 caaaagtagc gctttatttt catctcaagg aaaaacctta agtaaaagtt aatactagat
     1861 agtactagta tagcataatt tatttaccac gcaagcacga tctaattaaa atttttgaaa
     1921 aattcacttt tactcgcctt tttcgataat catgctataa tacttgtgtg aggtgaagac
     1981 aaattgaacg caaaatgtat cttgtgcgag cgtgtagatg agctagacaa tcgcgaattt
     2041 aaaacaaaac aattacgtaa taaacctatt agaatgtatc tatgtcctga atgtgaacat
     2101 cgagtagcta ttaacactat cagtcgcgtt aattctggtc atttcaattt tcataaacca
     2161 gtagtaatgt cgaatagtga gttaaagaat ttaatagaaa gtgctggaaa atagagaaaa
     2221 tccgcccttt atcgggcgga tttttttatt ttactgggaa tgaggcaact acatcatcgc
     2281 ctgcattagc ttcagaaaca cttgcatcaa atttatcagg atttggaaca cctatttttg
     2341 agtcagctgc taaatcattg tacacagctt ctgtcattgt aaatgtaaga agcccacgag
     2401 ctgtttttcc agcggtgaaa atatttggat ctgctttact tcctataaga tgaaaattag
     2461 aaggaacaaa attatctaag cttcctccta caaattcatt tgctcctata agtgtaattt
     2521 ggtctgcttt gtacatttta tcttttgcag aagtattttt aatggaaatg tctaaagtga
     2581 ttacatagcc gtttttattt gctaaatagc tttctggatt acttgcacta actgctttat
     2641 tcgcaccaac aacatgctct actttatatt gattcacttc aatcgttaaa ttttcaaaga
     2701 ttttttcgaa tgatggggca ctcgacaaat acgttgttgt tacagttcca ccaagaacag
     2761 aagatacatt ggaagttttg aagcctgtac tagataacga aaaagccggt gtagttggac
     2821 tattgctttt atctgttgca ctactattat ttttggccgg tgcgtttttc tctacatctg
     2881 agcttccttt tgtgactaca cctttatcat ccgttacgga atcttttgtt gtcgcttctt
     2941 tggttgttgt ttcttttttc tctgtgtcaa ttgctttctt aggtgtagat gtggcttttt
     3001 tagctgttgt tttgctttca ttgttgtctt ttgcagagtt tccgcttgca taaacaccga
     3061 ttacaactcc tccgataaga agtaccacta atactgcaag aataattata cgttttttca
     3121 tcatactaac caccttttct acttacttct aatataccaa atagcttttc atattacaat
     3181 agtgttacaa acacattatt ttattccctt ttccagcaaa ttaaagcata aaaaaaccaa
     3241 atagttttta aaggatattc ctaccactta aaaaccattt ggccgattca aatatatatt
     3301 attcagcagt ttttgaacgt tttgctgctt tttcacgttc gtttttgttt aggatttttt
     3361 tacgtaaacg gatggattct ggtgttactt cacagtattc atcttcgttt aggaattcta
     3421 atgattcttc tagtgataaa tgacgaggtt ttttgattac gtttgtttgg tctttgttag
     3481 cagaacgaat gttagtcatt tgttttgctt tcacaatgtt tacagcgata tcgccttcac
     3541 gattgttttc cccaacgatc ataccttcgt aaatatccgt accaggttct ataaaaatag
     3601 taccacggtc ttctacttgc attgttccgt aagtagtaga tttacctgtt tccatggata
     3661 caagaacacc acgactacgt ccgccaacgc gtcctttttg gattggttgg tagctatcga
     3721 atgtgtggtt gataatacca taaccacgag tcattgaaag gaaatcagtt gtataaccga
     3781 ttaagccacg agctggaacc atgaattgta aacgaacttg gccgttaccg tcgttaatca
     3841 tgtttttcat ttcgccttta cgttggctaa tagattcaat aacagaaccc atgaattctt
     3901 ctggagtatc aatttgaaca tcttctactg gttcacattt cacgccatca atttcacgga
     3961 tgattacttc tggtttagaa acttgtaatt cataaccttc gcgacgcatt gtttcgatca
     4021 gaatggataa atgaagctca ccacgaccag aaactaccca agcgtctgga gaagctgttg
     4081 gttcaacgcg taaagataca tccgtttgaa gttctgcaag taagcgttct tcaattttac
     4141 ggcttgttac gtgtttacct tcacggcctg cgaaaggact gttatttgta acaaaagtca
     4201 tttgcaatgt tggctcatca atacgtaaaa gtggaagtgc ttcttggtga tcgaaaggtg
     4261 ttactgtttc accaacgaaa atgtcttcca ttcccgcaag tgctactaag tcacccgctt
     4321 ttgcttcttt aatttcgtca cgttttagtc cgaagaaacc gaacattttc gttacacgga
     4381 attgttttac tgtgccatca agtttaatta aagcaactgt ttgtcccacg tgcattgttc
     4441 cacggaatac gcggccaata ccgatacgac caacatagtc attataatca agtaatgata
     4501 cttggaattg taatggttcg tcgctattat caactggagc cgggatatgt tcgataattg
     4561 tgtctaaaag tggtttcatt gtttcttttt gttctgctgg atcagaatca tagcttgaag
     4621 ttccgttgat tgcagaagca taaacaactg ggaattctaa ttgatcgtcg ttcgcaccta
     4681 attcgatgaa taattctaat acttcatcaa caacttcttc tgggcgagca aaatcacggt
     4741 caattttgtt tactacaacg atcggtgtta agttttgttc tagtgctttt tttagtacaa
     4801 aacgtgtttg aggcatagta ccttcatacg cgtccactac taaaagaaca ccatctacca
     4861 ttttcatgat acgttctact tctccaccga aatcggcgtg tccaggtgta tccatgatgt
     4921 ttacacgtgt atcttcatac ttaatcgctg tatttttcgc taaaattgta ataccgcgtt
     4981 ctctttctaa atcattgttg tccattgcgc gttctgcaac tgtttcattg tcgcggaatg
     5041 tgcctgactg gcgtagtaat tggtctacta gagttgtttt accatggtca acgtgggcaa
     5101 taattgctac attacgaata tcatttctta aattcaatct tgtttcctcc taaattaaaa
     5161 atccaaacat ttatcgtgaa gattagccaa aagaaagagg aaaatagatt tattttcctc
     5221 cgtcgctatc gtctcgttta aatcaactta cctattatag catagctgag cggatttggc
     5281 acgattttta ttttctgaaa acaagttttt ttatgttgag cgctttcttt aaggcaggta
     5341 gttatctaat aaggtttgat ggatttttgg cgatgctaca atagaacttc ctttttctaa
     5401 catattgatt ttttcaccat taatccgtgt cactttcccg cctaattctt cgacgataat
     5461 ttttccagca gctatatccc acggggctaa attagcagaa agataggctc ccgctcgtcc
     5521 agtagcaaca tccatatatt ccagtgaagc tgctccgtgt aatcgtaatc ctctagaagc
     5581 ttttaccgcc tcccacatgg ttgggaattt tcttgtcacg ctcaaattag caattaatag
     5641 cgtatctttt aggtctattg ctgggtcaag tttagggata gttctgccgt ttactgtagc
     5701 accttttcct ttttctccaa aatacagctc atcgcgtgca acgtcataaa tataagcaag
     5761 ctgccctatt ccatcttcat aaactgcaag tgaaatcgca aaatcgcgtt gctgttcaac
     5821 aaaattcaat gtcccgtcaa ttgggtcaag aatccaaacc actccatcta aatctgttac
     5881 atctgacgcc attccttctt caccaaataa acgatggtca ggaaaatggt ctttaatttg
     5941 ttgaacaaaa aaagcttcgg tttctttatc catattcgtc actaaatcat ttcgaccgga
     6001 tttgacatca atgtctagtg tttctttgaa agattgttta attttcgctg cggcttccat
     6061 gatccataac cttgctaaat aatctatttt ttcgctgtcc ataaacacac ctcttcgcac
     6121 tctttttgtt tattttatca caaaaatgaa ttatctgaat agaacaagat tctttcactt
     6181 agaacttaac ttccgtataa tgaaactata tgcaaaatta ggaggaaaac agatgacttt
     6241 taaaggattt agtaagaaag attttaaaac aatgcaaatt cctgggcttg aagcacgtat
     6301 gaacggaatt caaacggata tccaaccaaa attcagagct gttggggaag aattgactac
     6361 ttatttaagt gccaagcttg gcgatgaaat gtttttacat attgctcgtc accaaagacg
     6421 ttcagttaac ccacccgaaa gcacttggct ggccatttgc catgataaac gtggatataa
     6481 aaagcaccct catttccaag tgggtctatt cgataattat ttattcattt ggctcgcttt
     6541 tatttatgaa aatgaagaaa gcgcgaaaat cgccaatcgc ttcttgaaag aaaagaaatt
     6601 attggctgat ttaccggata actttgccat ttctccagat cacacagagg aaaagacgta
     6661 tccggtacac gacggacaac taaaggccac gcttgaacga ttccgtgatg tgaaaaaagg
     6721 agaattctta gttgggaaaa tttatctacc agatgatagc catttatccc cagggaaaga
     6781 cttcattaaa gaggcagaaa tggtccttga cgagctaatt ccgctctata aggcttccct
     6841 tcaataaaag atgtacaaat gactataatc taggtataat ggtagagttg tgaattacta
     6901 tggtttgaag gagttgagga acgtgaaaaa ggagcagcaa acagcaagtg accctggtcc
     6961 acatcgaagt attcatacag gtgatttttc acgggaacga aactctaacc gcgtgaaatt
     7021 tacctgttaa aaaaggaggt aaaaagcatg catcaaattt tcaaatcaga tgaaaacggc
     7081 aaattaattg aattagaaga agtgacgcgc aattgttgga ttaatattgt tgctccaact
     7141 tccgaagaaa ttaataaaat tgccgataac tacgaaattc cactagagtt cttagaagat
     7201 ccactagata aagatgaaag tgcccggatt gaacgcgatg acgactcgga ttccgtttta
     7261 atcgtctgtg actttccggt agttgatgaa gatgatattc attacgcttc attcgaaacc
     7321 attccaatgg ggataattat tacaaaggat tattttatta caatttgtac gattgattct
     7381 tctattgtac agtcatttat tagaaaccgt attaagggct tttatacaca tatgaaaaca
     7441 cggtttgcat tgcaaatctt atacatgatt tccactactt tcttgcgtca cttaaaacgc
     7501 ttgaaccgtc aaacagacga aatcgaaaaa gaactacatg aatctatgaa aaataaacaa
     7561 ctttatgatt taatggggat tgaaaaaagt ttagtttact ttgtaaccgc ccttaaatcg
     7621 aataaagtcg tacttgataa aatgatgcgt caaaatattg ttaaaatgta cgaagaagat
     7681 caagacttat tagaagatgt tattattgaa aatcgccaag gtattgaaat ggcggaagtc
     7741 cactcgaata ttttgagcgg gatgatggat gcctatgctt caattatctc gaacaatatg
     7801 aatatcgtga tgaaattcct tacttctttt accatcatct tgacgattcc aacgatggtg
     7861 tttagttttt acggaatgaa cgtgaaatta ccgtttatga atacaccaat ggcttggatg
     7921 ctgacgctcg gttttgcatt cgggattgcc ggagcgcttg cgattgtatt ctggcggagg
     7981 aaattctttt aaaaataaac aaaaagcgaa tgtattacct aaaattttag gccaatacat
     8041 tcgctttttt tatttagcta attcgccgtc tagtaacgaa cgtaattctt caggactaat
     8101 gtgctcatca aaaatatgtt cacccacaat aacagtcggt acaaaaacaa catttgccgc
     8161 gtttgcctca gcaacaattt tttctgatgc agctttattg tcttgctctg ttaagcctaa
     8221 ctcggattcc atataagtag ctacttcagg aagcgttagg ctaccccatt catcttgctt
     8281 actataaatt ttattgattg tttcacgggt ttcttccggt ttggaataat ctaagtagcg
     8341 atgcgttaca tttcctcgtt gtaacgattc tttttcttta tcaaatggtt taatgattaa
     8401 ttcaattttc cctgcttgaa tatattccgt tagaacgtct ttggattttt cattccattc
     8461 tctacaaaat gggcaacgta agttaacgaa tgacattacc tttactggcg cagtttgatc
     8521 tcctacgtgt atccctgttt ctggtgttac tacttctgct ttaatttggc taatatccat
     8581 gaaaaaaatt cctcctctta attatggttg catttttatt ttactagtag ttgcgttttt
     8641 tacaagttgc atgactttat aggccgaata gccacttgct ttttcaaagt cgataccaat
     8701 ccgtttttct tctcctttgg cagggactac ttgtttgaat gctcgatatt tttctttgag
     8761 ctcaagcgta tctatgccct tttcatacgc tcgctcaata gcttctaaaa attgcacaac
     8821 aatcgtcatt tcttcggttg tccagtctgg atttagtgga taactgtatt ccattaacta
     8881 atccctcctt tgttaagttg caattcttcc aatttctcgg tggtttttgt ggcgatttgt
     8941 tttaattctt tttgttcatc gtctgagaga tgtaattcaa gtagttctct gactccttct
     9001 gcgccaatga cagctggaac actaatgaag acaggatttt ctaaaccata tgcgtctttc
     9061 acttcaacac caactgtgat aactcttgct tcgtcgcgca aaacaacttc ggttaattca
     9121 gcaagaacag ttaccgtgct aaatcgaaaa gaacaaccat ctttattttc aaaaggaaaa
     9181 tctggaattt tagtaatcat ttttgttaaa ttttgtaaat cctctgctga gattcttttt
     9241 tgctcttcag ctaaataact taaaattggt ttgcctccaa gaaaggctct actccataca
     9301 ggaatgacat cttctgcatt atcgccaata atatatccgt gtacattttt agggctaatt
     9361 ttaaataatt tagcaatttc cacttgaaaa taagacgtcg caagcatggt gccaagcgta
     9421 ataatttgat ttacaggtaa gccggagaaa cgtttaatta acgcggcaac gacattactt
     9481 tcagctgtcg ccactaagac aattcctcgg aaaccgctcg ccatcatttt cttcactttt
     9541 tctttgatta gcgtgacatt gtcttctttt gaaacgagtt gattggacat ttcttcttga
     9601 aaaaagacga ctatatcagc gttgcgacac tcgttgaagg ttcctgcgtg aatggtcgca
     9661 tctgcatgat aataactcgc atagtcaaaa tcttgtacgc ttgttttagc ttgatcgtct
     9721 attaagtaaa tctcggctgg tattttttta aaaagaactg tatgaatgta gagattttgt
     9781 agattacttc tgccgataac gacaattttt ttcttcttag atggcatatg catctcctcc
     9841 tcatcaagtc tcttattgtt attttagcat gcttccgagg caaaaataaa ataacttgac
     9901 cacataaata aaaagcaatg ctcattcgct ttgcttttta caaaataatc ttattttaag
     9961 ccatttcacg tcgttttact tttaaataat gcgttgcaaa acagaagaaa atcggtaata
    10021 cataactaac gataatcaga ataattactt ctaagattcc tttaccgatg tagccaccag
    10081 tcattttgac aaagcctgtg attggagttt cgagaatttg aataacggaa cgccatccac
    10141 ctgtatcatg catgtgatga ataaatccta caataaaggc cacaatcgtt aataaaaaac
    10201 aaattcctgc tactacatac gcaaaccaaa atagagcttt cttccaagtt gctgtttgtt
    10261 tctccatttt ttcacctgat tcaattagat ttgacttgtt acattcactt gttacattat
    10321 actccttttt ttctaaaacg gatactttaa atatttcaaa aaatgaacta aaagagtttt
    10381 tgtgaaatca cgcactaatt tatatagata aaaagcggaa atatccataa aggatacctc
    10441 cgctttaagt tgattacatg tgaattggac gacctaaagc aagttcagct gcttccattg
    10501 taagctctcc aagggatgga tgagcatgga tagtaagcgc gatgtcttca gctgtaatac
    10561 ctgattcgat tgctaagccg atttctgaaa taatatcaga agcgttcatt ccggcaactt
    10621 gtgcaccgat aactaggcca tcttctttac gagtaactag acgaacaaat ccttcaggtg
    10681 catctaaaga aagcgcacga ccgttaccgc cgaatgggaa tttagcagct tttacatcaa
    10741 agcctttttc ttttgcttct ttttctgtta aaccaactgt tgcaagttct gggtcactga
    10801 aaacaacagc tggaagtgct gtataatcgt tttctgcttt ttcgccagca attgcttcag
    10861 cagcgatttt tgcttcatag ctagctttgt gagctagagg aacaccagga acgatgtcac
    10921 caattgcgaa aatgttagga acgttcgagc gaccttgttt gtcaacttct actaaaccgc
    10981 gttctgttac tttaacgcca gcttgttcta aaccgatttc gtctgtattt gggcgacgac
    11041 ctactgtcac taaaacataa tcagcttcga tagttttagt ttcaccgtta gcttcatacg
    11101 ttactttaac gccgttttca gtttcttcag cagattttgc aagtgcttta gtaaccattt
    11161 caacgttttt gcttttcaga ttacgtttaa ctagggaaac catgtctttt tcgtatgttg
    11221 gtaagatttc tggaccacct tcaaggatag ttagttctgt accaaggtta gcgaatgctc
    11281 cacctagttc tgttccgata tatccgccgc caattacgac taattttttc ggaacttctg
    11341 ttagtgcaag tgcaccagtt gagcttaata cacgtttacc atatttgaaa cctgggattt
    11401 cgattggacg agatcctgtt gcaatgatta cgttgttaaa tgtataagtt tgagcggagt
    11461 cagggtgaat cacacgtaag gaatgatcat ccacgaagaa cgcttctcct tctaacattt
    11521 caactttatt tttcttaaga aggcctttaa cacctgatgt aagcttgtta actacgccgc
    11581 ctttccattc ttgtgctttt gtgaaatcta agttcacgtt gtctgctgta atacccatgt
    11641 tatcagagtg tccagcttct ttaaaacggt gaccgattgt gataagtgct ttggaaggaa
    11701 tacatcccac gtttaagcac acaccgccgt aatattcttt ttcaataatg gtaacttttt
    11761 gtccgagttg tgcagctcgg attgcggcta catacccacc tgggcctgca ccgatgacta
    11821 tggtgtctct ttcttctgga aaatcgccta ctaccatttt gttacacctc cattagtaat
    11881 aattctggat cgtttaataa acgtttaata ttgttcattg ctttttgagc agttgcgccg
    11941 tcaattacac ggtggtcaaa gctcaaggaa agagcaagta ctggtgctgc tacaatttcg
    12001 ccatctttta cgataggttt ttgagcaata cgaccaacac ctagaatagc aacttctggg
    12061 taattaatta ctggagtgaa ccattgtccg ccggcagaac cgatattaga aatagttgcg
    12121 gaaccgtggc gcatttcgtc agcagttaat ttaccatcac gtgcttttcc agctagttcg
    12181 ttgatttcat cagaaatttg gaatacggat tttttatcag catttttaat tactggtaca
    12241 tataaaccgt ggtctgtatc tgctgcgata ccaacgttga agtaatgttt gtaaacaagt
    12301 tcttctgtcg catcatctaa agttgtgtta agcactggga agtcacgaag cgttgcaaca
    12361 agagctttca ccatataagg taagaaagtt agtttgatac ctttttcggc agccacttct
    12421 ttgaaacgtt tgcggtgagc cataagtgca gttacttcga tttcgtccat taaagtaacg
    12481 tgtggagctg tatgttttga atttaccatt gcttttgcaa tcgcacgacg agttggtgtt
    12541 aatttttcgc gtgtttctgg gtaagcatcg gagcttgcaa ctggttgttt tgctgctgct
    12601 ttttctgcct ttggtgctgc tgctttttct tctgtttgag cagtagttgt tgatgcagct
    12661 ggttgttcgc cgtttaggaa agcatcaata tcagctttaa ctacgcggtt attttttcca
    12721 gagcctgcta cttcagcgat attaacgcct ttttcacgcg catatttacg tacagaaggc
    12781 attgcaatta caaggccatt aggatctttt ttagatgatg gcgttccgtt tccacctgta
    12841 actggagcgg aagttgcatc gttgtttgta agttcagctt cttctgctgg agattctgga
    12901 gtagattcat gactagcttc tccttcaaaa tcgccttcga atgttactaa tacttgacca
    12961 actgttgcta ctgttccttc gctaactaaa atatctttaa cagttccatc tactggagaa
    13021 gtaatttctt cgacagattt gtcgttttgt acttcaaaaa tggactgatc ttcttctact
    13081 ttatcgcccg gttgaataaa ccatttaaca atttcacctt catgaattcc ttcaccaata
    13141 tctggtaatt tgaattcaaa aattcctttt ccgctagctt gtgcgggtgc aggagttgat
    13201 tctgtggatt ctgcttttgg tgctgcgctt tcttcttcgg cgtcgtcttc gtgaccttct
    13261 acgccatcaa atgttactag tacttgtcca actgtagcaa ctgtaccttc tgcaactttg
    13321 atttctttaa tcgttcctga aactggagaa gtgatttctt ccactgattt gtcgttttgt
    13381 acttcaaata gggattcatc ttcttcaatc ttatcgcctg gttgtacaaa ccatttaacg
    13441 atttcacctt catggatacc ttcaccgata tccggtaatt taaatgaata tgccatttta
    13501 ttaagcctcc tgtaatttct aaggttcaga taaactgaac cttagtataa aaatatttct
    13561 ttccccttct aaaactcccc ataagtttta aaacggtcat tataaattaa aatgcaataa
    13621 cttcttttac acgttcgatg atatcgttgt ggttaggtaa ccaaactgtt tctgcttgag
    13681 agaacgggaa tacgctatct ggagcagcaa cacgcataac tggagcttca agagaaagga
    13741 ttgcatggtc gttgatttca gcaacgatat tagctgcaat acctgcttgt ttttgcgctt
    13801 cttgaactac aactgcgcgg tttgttttct taacggaagc aatgattgtt tccacatcaa
    13861 ttgggctaat tgtacgtaaa tcgataactt ctacagatac gccatctttt tcaagcgctt
    13921 ctgctgcttt cattgattct tgtaccattg caccgtaagt gatgatagaa acatccgtac
    13981 cttcacgacg aacagctgct ttaccaattt ctactgtgta ttcgccttct ggaacttctt
    14041 cacggaaaga acggtataat ttcatatgtt ctaagaagat aactggatcg ttatcacgaa
    14101 tagctgagat taaaagacct tttgcatcat atggagtgga tggaattacc acttttaaac
    14161 caggtgattg agccattaat ccttctaagt tatccgcatg catttctggt gtatgaactc
    14221 caccaccaaa aggtgcgcga attgtaattg gagcagtacg agttccgcct gtacgataac
    14281 gcatacgagc catttgacca gcaacggaat ccattacttc aaatacgaaa ccgaagaatt
    14341 gaatttctgg aactggacgg aaaccttcaa gtgcaagacc aatcgcaaga ccaccgatac
    14401 cagattctgc tagaggagta tcgaatacac gatcttcgcc aaatttttct tgtaatcctt
    14461 ctgttgcacg gaatactccg ccgtttttac caacgtcttc cccaaaaact aatacgtttt
    14521 cgtctttttc aagttctact gcaagcgcat ctgtaatcgc ttgaatcatt gttttttgcg
    14581 ccatgattat ttcgactcct tcgcttcata gattgccagt tgctctttga taggagcagt
    14641 tggtgtttcg tacatatttt taagaagatc agttacagtt tgttttggtg tagcatctgc
    14701 ttctttaatt gctactttga tttcttcttt tgcttgatcg ataacagcat tttctttttc
    14761 ttcgttccaa aggcctttac cttctaagaa agtacggaag cgaacgattg ggtctttaag
    14821 ttcccattct ccgtcaagtt cttttgtacg gtaacgagtt ggatcatcac cagaaagtgt
    14881 atgtggacca taacggtaag tcattgtttc gattaatgtt gggccttcac cagcaactgc
    14941 acgttcacga gcgaatttag ttacagcata tactgcaagt ggatccattc cgtctacttg
    15001 tacgcctggg attccggctg caactgcttt ttgagctaat gtttcagcag ctgattgttt
    15061 ttcacgaggt gtagaaatcg cgaatttgtt attttgtact acgaagattg ctggagcatg
    15121 gtaagcacct gcaaagttca ttccttcata gaagtcacct tgggaagaac caccatcacc
    15181 tgtataagtg attacaacag catctttttt acgtttttta agtcctagag caacaccggc
    15241 agcttgcacg atttgtgcac cgatgatgat ttgtggtgat aatacattta aatcttcagg
    15301 gaattggtta cctacaaagt gtccacgaga gaacaagaac gcttttgtaa gtggaagtcc
    15361 gtgccagata agttgtggca catcacggta acccggaaga atatagtcat gtttttcaag
    15421 tgcgtagtgg cttgcaagtt gggaagcttc ttgtccagca gttggagcgt agaaacctag
    15481 acgtccttga cggttaagtg agatagaacg ttggtcaagt acacgagtcc aaaccatgcg
    15541 agtcattaat tctactaact cgtcatcagt taaatccggc attaaatctg gattaacgat
    15601 ttctcctttt tcattcaaaa tttgaactaa ttcaaattgt ttatgaacag cctcaaattg
    15661 tttctttacg tcgataatag ccttctttgt tttagaagcc atttcgtatc caccctttcg
    15721 tcattcacat tgtacagttt caaattcttc attagttagg tatgcgtttt atgtaacgct
    15781 cgtccggtca tttacccatc taaatggatt cttttaaaac tgccatcctg attgtgtatt
    15841 aattataata gcgtagtaaa aagaaaagtc
//
LOCUS       DASDYO010000070        15664 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.070, whole genome shotgun sequence.
ACCESSION   DASDYO010000070 DASDYO010000000
VERSION     DASDYO010000070.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15664)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15664)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15664
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.070"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..338
                     /locus_tag="U0290_001816"
     CDS             <1..338
                     /locus_tag="U0290_001816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage head morphogenesis protein"
                     /protein_id="HEM2301857.1"
                     /translation="KSWENKSFTISTQIEKKVAKWDEINELFSHEKWANDDYFSDICS
                     ALTENRVKGNAGHAASYWNRKGSIEKEIFANLFAMLAMNKQESIAMVKKQFPMIYGSF
                     IKMLEGELK"
     gene            335..505
                     /locus_tag="U0290_001817"
     CDS             335..505
                     /locus_tag="U0290_001817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301858.1"
                     /translation="MINYKKWLDSMMSTEDGKILFERYKKLYGHYPPFLLDATEKEQW
                     DEIKRLIKDADK"
     gene            554..1663
                     /locus_tag="U0290_001818"
     CDS             554..1663
                     /locus_tag="U0290_001818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2213 domain-containing protein"
                     /protein_id="HEM2301859.1"
                     /translation="MKVQRFDKSFITDSNMQVTKEGYLTVKAPVTRPGVFPYQRADGS
                     IQLEAKLPENLFASETIQSLNAKPVTNDHPNEPVNASNHQKYAKGTTHTDACVSDNKL
                     FVSFTITDSKTIQAVQDGKRELSLGFESEVVKESGTYAGERYDAVQKSVLVNHLAIVD
                     EGRVGPEIAIRGDSAAFMIDSKNTKKQGGNKMPVLKIDSKEYEVDSVVKSRFDALEAK
                     LDAANAKAAKVDALEGERDGLKTKLDKAESDLEEANKNTMTEEDIENAVTERAALLDS
                     AKVMLGDSFDFKGKTAREIKEAAIKTSNDSFDSKDKSDEYVNAFYDAMTVTADAKGYT
                     ADANFNKGKPDPKELEEIEKKKAARQNFGKKGDNK"
     gene            1663..2115
                     /locus_tag="U0290_001819"
     CDS             1663..2115
                     /locus_tag="U0290_001819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301860.1"
                     /translation="MSIPTGQEYMMPELGLGKIASYQRSQVDSAAVKANIKFGQAVQV
                     LDDEASPLEATGDFYGVAVAKNYVDEYTDDKVGVYKPSEAVPVLRQGTITVIVDEDVK
                     SGEKAVVNTDTSNFLPSTTAKTTKTGVIGVFKSTTSKDGLAKLEINLP"
     gene            2136..3041
                     /locus_tag="U0290_001820"
     CDS             2136..3041
                     /locus_tag="U0290_001820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="encapsulin"
                     /protein_id="HEM2301861.1"
                     /translation="MPGKITATIEARDLQAIDNVIYEPKQEELTARSVFPQKFDVNEG
                     AESYSFDVMTRSGAAKIIANGADDLPLVDVDMVRKSVPIYSIGIGLSYTVQDLRAARM
                     QGTTVDAAKAATVRRAIAEKENSIAFRGEKKYAIKGAFEATGIQIDVSPTTGVGNVSK
                     WEKKTAEQIIDEIGAAHTKITVLPGYGTASLKLCLPPKQFELINKKRYSNEDSRSVLK
                     VLQDNAWFSAIVRVPDLAGMGTSSSDSFAVIHDSNETAELIIPMDITRHPEEYSFPRT
                     KVPFEERTAGVVVRFPAAIVRVDGI"
     gene            3064..3450
                     /locus_tag="U0290_001821"
     CDS             3064..3450
                     /locus_tag="U0290_001821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301862.1"
                     /translation="MIIENKGDYVRFLGKVRLVPGTNNIDNEHAEELEQALKHPLNIH
                     LIESDELKVPDNLQQDSSLNDFNATKAALLVKDTFDLGALNEFLAEETTNGNRKTVID
                     AINKQIESISNPPQEERYVPEEDFGK"
     gene            3462..3797
                     /locus_tag="U0290_001822"
     CDS             3462..3797
                     /locus_tag="U0290_001822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4054 domain-containing protein"
                     /protein_id="HEM2301863.1"
                     /translation="MKTDVSKLKLTASALASVSDDSLQVHIDDSYLEVQEKGFPEKFE
                     ERANRYLAAHLATLANKNVKSEAVGSLKREYYEVKGDSGLLSTEYGQEYARLLKEANG
                     GSGISMVVV"
     gene            3797..4396
                     /locus_tag="U0290_001823"
     CDS             3797..4396
                     /locus_tag="U0290_001823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301864.1"
                     /translation="MKVTTDKSTMNKAIRELDQLDRYSLQIGLFGEDDSFIQMIAGVH
                     EFGLTIRPKGKYLTIPTPEAGDRRARDIPGLFKPRGKNILAVAGPDGKLTVMFYLKKE
                     VNIPERSFLRSTFDEKSNKWGELFEGWIDDIIHGKLSAEQVYNRLGAKIVDDIQMKIV
                     EIQTPAKSAATLARNPRKNNPLIVTGKMKNSVTWKVMKS"
     gene            4396..4770
                     /locus_tag="U0290_001824"
     CDS             4396..4770
                     /locus_tag="U0290_001824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301865.1"
                     /translation="MEKMVFQSLLDSFGVPLTVLKKQEKGGEFVNGEWVVSQLDETSK
                     IEVNEPFVPSSLMTQMPQTSAYMAARYEKYEMIWFSSQVLPLKSKVIHKGISYSVEDA
                     IPFTDYSDVTQYGCKAVSVSAK"
     gene            4760..5242
                     /locus_tag="U0290_001825"
     CDS             4760..5242
                     /locus_tag="U0290_001825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301866.1"
                     /translation="MPNDGYDYGILVKTLIGAVNELSGGLQLIESASGGEQPEYPFCQ
                     YTITSPYIAISPDIVEGEQFEIVISLTWRALSGHQALNLANITNKYFRSQKGRFFMQE
                     NGGIVVVSVQNSGLRDTFISIEYERSAGIDLRLRVVDSYSSEIQEIDNISFTNENLGG
                     "
     gene            5247..6242
                     /locus_tag="U0290_001826"
     CDS             5247..6242
                     /locus_tag="U0290_001826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3383 family protein"
                     /protein_id="HEM2301867.1"
                     /translation="MVETITDVRVHISVLYPSPRIGLGRPAIFVKGTAMGYKEYTTLE
                     ELKDTFADTTEVYAKAKAVFLQKDRPDTVAVITYEDTKLLEAAEAYFLKSWHFALLAE
                     FKAADALALSNLIEEQKFKFAVFQVTAVADITPLAKNTRTIAIVHSKTGEKLDAALIG
                     NVASLPVGSATWKGRHGLTGITSEELKVSEIDAIQKVGGMCYIEKAGIAQTSEGKTVS
                     GEFIDSIHGDDWIKATIETRLQKLLTETDKLTFDARGIALLQSELTTVLNEGFANGII
                     DSNDETGEPNFSITALQRSDLNDDDIAKRNYKGLSFRYKRSGAIHSVDVYGEVEV"
     gene            6259..6657
                     /locus_tag="U0290_001827"
     CDS             6259..6657
                     /locus_tag="U0290_001827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301868.1"
                     /translation="MSEVMATYDANTVSTIINGISIFGFSDGDMVSCSKDSNNVEIKS
                     DAQGNSSAAVNNDKMGTIKVDLAQTSPCYPKLIDIANRQLKVPIYVINGKEKIGGSMA
                     FIEKLPDAGFGKSVGTRSFTFKVLDYTHTA"
     gene            6710..7066
                     /locus_tag="U0290_001828"
     CDS             6710..7066
                     /locus_tag="U0290_001828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301869.1"
                     /translation="MAEKKNNATKSDVAAAQAAQKIPKAEKKPLDKFGKKEVFKASDK
                     VEYTFQFPGTRAAQAILDESKNGYGVIVDSVYYERIMKDVIVEPLGLDLDYWDEHEGY
                     REVMNAADNFLGGLLN"
     gene            7243..12273
                     /locus_tag="U0290_001829"
     CDS             7243..12273
                     /locus_tag="U0290_001829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan DD-metalloendopeptidase family
                     protein"
                     /protein_id="HEM2301870.1"
                     /translation="MSGALRKTTIEIDWKINNQMLQKADEETDRIVRSADKMERNFNQ
                     SARSVDGTTRAIHKQSNEVRESATRVDKLDKNFKEAKNSANQFGNSAKGAVDKTKNSV
                     DSAKNSVNKLDNEIDKTTKNANSKFSALKTTIIAVGSALLVAGGKAMFNYASDTNESL
                     NKVDVAFKGNAKNVKRWSKTTLDNIGLAQGTALDLAATYGDMSTSMGLNTQEAEKMST
                     SMVDLAGNLASFKNIDIDRANTALNGVFTGETEALKSLGIVMTQTNLEQFALETGAGK
                     VAKSSTEVTKQNIAREKAQKKLNEAIKEHGKNSLEAREAQNKLQEIQAKTSESAKVNL
                     KDMKQDELVRLRYNYVMKQTTNAHGDFKNTSDQAANASRVFSESVKELASNAGQFLLP
                     VITPLIIKASDFTKKLSDIPSAVKGMKEKFKPAFEVFESVGDFFKKDLIPSAKELAKS
                     MGPGFIEGGVLAFKGLGIVLNTTVIPAFKAVTKFTRENPDSMKRIAKYATVGVAGFLG
                     FKLVKNTIDKVTVAIGKMNSKLLSIGPSAAAGATEANVAMSTIGTTTNGAGGVVLPGG
                     KGKGKIKLFSKATAGLKSMGKFGKLASGVGVLGVGLSATELIGMNKDNAGEKTGGFGG
                     SLGGMAGGAAIGTAIAPGIGTAIGGAIGAFAGTALGKELGKYVQKEGPKILDKFKTGW
                     KGLSKIAEEHPILGANINVINKTIDAAKKGIKAVGDTHKAVWNISKAMVADPLKIDAG
                     GKGVSKDSAKAMNKYLSAEQKLQNDSTSRIVDGKSISGNEYKENMKTHDNMSIQLVNA
                     TDKKSVKANNDWDRLVASGAVSKDVASAKKHTNNETASINKADIKKNTEELKRLEKSR
                     FEEQRKIEENAAGAILKIKENAKKKGVKLSKEEKVEIEQINKDKVTAIQVSESTYSKK
                     SAEIQKKQRKEATIALSKSAKEQKIILGNLENSKSEMSAKAAASVVKNSAKQRNATVK
                     EANKEFKDTKRILDEKRFVTGEIGEKEYREAIKQAKKKKDGTIDEAEKMHKEVVNQAQ
                     KQAKGHLKEVDWETGETLSKWDQFKKATSETFNSIKDAALGKWNELSSATVNIFGGMK
                     DASLRVWDSFKTNLYKMVNNVITAVNKVLSFFSIGSIPLLGNGNIGASQENKLSAKDK
                     KTYHSTSQSGNLAMNYTGSDSAAGQIMAGEEGFEIAYNKNSAQARILGKNGPEITTVA
                     PGTKILNHAESKKMMSGGMGAGTVLPGFAKGTNGAVESLKSLGSNAIDSVKNAGNKVK
                     DIASSAWDFATDPVAGVNKLMAKYNKLPNNSPMANMAGGMFKYFGKGAGDWLKEKLAD
                     VFMTSDGGGEGGGMFSPHFGSPFRMTSGYGPRTVFGKQEFHKGIDYGAPTGTPLPAQY
                     GGKVSRAGTAGGFGNLVSITAGKGIENLYGHLSKILTSAGSVVKAGQIIGLVGSTGRS
                     TGPHVHYQVNQNGKPVNPSSSLGGGSFNGKGGSKAVNGWVQQAIGLTGVPASWSNALA
                     TIAMKESNGNPNAVNNWDINAKRGMASQGLMQTIPATFNAYKMKGHGNILNPVDNIIA
                     AIGYIKARYGTVFNVPGIKALASGKAYKGYKRGGRPPVNETVLVGEEGPELFETDTAG
                     TVHTAQKTKQMLNKSSSGTTINFNPTINITVEGGSSESESSIRKTVRAEMEKLFEKLV
                     GIYSPGEV"
     gene            12279..12827
                     /locus_tag="U0290_001830"
     CDS             12279..12827
                     /locus_tag="U0290_001830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM2301871.1"
                     /translation="MVATIGSVKLVNTNESESSPFTITDNPVETGSPVSDHVQRETKT
                     LEISGFLLGATAEKDYATLKSYAEKGTIVSFRGRVYFKNVLISNLSKSYNTIKNGFEI
                     TVSLRDLRRASTPWVRKKKKSSGKKQSVKSKKSPGTYITVKKGDCYWKWWKRYGTSIA
                     QLRKWNKWPDRRIPIGKRARVK"
     gene            12827..13198
                     /locus_tag="U0290_001831"
     CDS             12827..13198
                     /locus_tag="U0290_001831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301872.1"
                     /translation="MAIRNYIPVELDNIPELFEFDFDDGKSFLFGINYAESQDLFSVD
                     LYSIEGEPIALGERLVLNERLWADIIDDRLPSVDLVPLDESGKETKITKDNFTKTVFL
                     YFDDLAPEMELPTLDNEVSMI"
     gene            13204..14010
                     /locus_tag="U0290_001832"
     CDS             13204..14010
                     /locus_tag="U0290_001832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301873.1"
                     /translation="MLWMREIYVHINNGSEYATIHEKNEASGSLKINFSIPFSDEPKP
                     AECEVVIYNLSRNSSNKIKKGSTISVTAGYQGDKGLLSQGKVTKVSTVPSGVDKITTI
                     KFSEGVDYSDKKDVNITFKKGTSAKSIIQRIATKAGIKIYQIKLPTNKIYKSGYTADG
                     DALSVIEEIVKDCKAAIYYRRGNLVIRSIKSGDDERFTLNSSTGLISSPERLENDEYS
                     GWSFQSLLQHRIATASIITLKSKTVNGTFRVKNGMHNYDGSTFTTQCEVV"
     gene            14011..14349
                     /locus_tag="U0290_001833"
     CDS             14011..14349
                     /locus_tag="U0290_001833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301874.1"
                     /translation="MAQDTKFFDSFIRLVNSSVSVLLMCRVVNYDASNKRADVQPLNL
                     KPNGAKRAMILDALVLKHTEEDISEGKIVAIVFSDCELDNINGSTDFKPESSRQHSVN
                     DAVVVGVWDV"
     gene            14346..14708
                     /locus_tag="U0290_001834"
     CDS             14346..14708
                     /locus_tag="U0290_001834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2634 domain-containing protein"
                     /protein_id="HEM2301875.1"
                     /translation="MKDLLIDSNGDIVVSDNDILMTDGVNDIVQCVRMILQTREGEFY
                     FDENSGMNHENLFTKKPNFDYIKQDVITAIEEQEERISSVDSVLFDFDKDTRKLHVSI
                     KMTGLDGPVSVEEVILNA"
     gene            14701..>15664
                     /locus_tag="U0290_001835"
     CDS             14701..>15664
                     /locus_tag="U0290_001835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991664.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="baseplate J/gp47 family protein"
                     /protein_id="HEM2301876.1"
                     /translation="MLDEHGFKRKTYDELLTDMESKAKELFGEDINLSSHSALGVFLR
                     IIAWFMSLIHELAERVYNSGFISSADGVQLDRLGSNISVLREPAMPAVVTLELTGNAG
                     YTIEEGVQFKTKNDVVFEMIDVVTLDDKGHGIGQAISQIYSDKANVPANSITVVAEPS
                     EDILTVNNPNKADGGSEKENDTSYRARIRLATSASPGPPVNGIISALNQVSGVRSVSI
                     IENNSIDLDAYNNPAKSVHIYCLGGIDEEIGEAIFNSVAAGIQTVGKVTVKVKDLSGF
                     EHSVYYDRATSLSIYAHIIVDVNSKFEDDGGDVIKQAVLNYINSL"
BASE COUNT         5521 a         2486 c         3513 g         4144 t
ORIGIN      
        1 ataaatcttg ggaaaataag agttttacta tttctactca gatagagaag aaagttgcaa
       61 agtgggatga aataaatgaa ttgttcagtc atgaaaaatg ggcaaacgat gattacttta
      121 gcgatatttg ttcggcactt acggaaaata gagtaaaagg taatgcagga catgccgctt
      181 cttactggaa tcgaaaaggg agcattgaaa aagagatttt tgcaaattta tttgctatgc
      241 tagcaatgaa caaacaagaa tcaattgcta tggtaaaaaa acaatttccg atgatttatg
      301 gatcgtttat taaaatgtta gaaggtgaat tgaagtgatt aactacaaaa aatggcttga
      361 tagcatgatg tctactgaag atggaaaaat actttttgaa cgttataaaa aactttatgg
      421 ccattatccg ccgttcttac ttgacgctac agaaaaagaa cagtgggatg aaattaaacg
      481 attgataaaa gacgctgata aatgattcag tgtctttttt atgccaaaaa ttgaaaggtg
      541 gtgagaatat gaaatgaagg tgcaacgatt tgataaatca tttattacag attcaaatat
      601 gcaagttact aaagaaggtt acttaactgt taaggcgcca gtcacgcggc caggggtatt
      661 tccttatcaa cgagcggacg gcagtattca gcttgaagcc aaattacccg aaaacctttt
      721 tgctagcgaa actattcaat cgctcaatgc aaagccagtt actaatgacc atccgaacga
      781 accagttaat gcaagcaatc atcaaaagta tgcaaaagga acaacgcata cagacgcgtg
      841 cgtaagtgat aataagctat ttgtatcttt cactattaca gactctaaga caatacaagc
      901 tgttcaagac ggtaaacgcg aactgtccct tggctttgaa tcggaagtag taaaagaaag
      961 tggtacttat gcaggcgaaa ggtacgatgc cgtgcaaaaa tctgtattag tcaatcattt
     1021 agcaattgta gatgaaggac gcgtgggtcc tgaaattgca atacgaggcg actcagctgc
     1081 ttttatgatt gattcaaaaa acacgaaaaa acaaggagga aacaaaatgc cagtactaaa
     1141 gattgatagc aaagaatatg aagtcgattc agttgttaag tcacgatttg acgcattaga
     1201 agcaaaactg gatgcagcaa atgctaaagc agctaaagtt gatgcattag agggagaacg
     1261 tgacggatta aaaacaaagt tagataaagc ggaaagtgat ctggaagaag ctaacaaaaa
     1321 tacaatgacg gaagaagata ttgaaaatgc ggtcacagaa cgagctgcat tattagattc
     1381 tgctaaagtg atgcttggtg attcatttga tttcaaaggg aaaactgctc gtgaaattaa
     1441 agaagccgct attaaaacat cgaatgattc atttgattct aaagacaaat cagatgaata
     1501 tgttaatgct ttttatgatg cgatgacagt tacagcagat gctaaaggat atactgcaga
     1561 tgctaacttt aataaaggca aacctgatcc aaaagagtta gaagaaattg aaaagaaaaa
     1621 agcggcgcga caaaattttg gtaagaaagg agataacaaa taatgagtat tccaaccgga
     1681 caagagtata tgatgcctga gctaggttta ggtaaaattg cttcttatca acgttcgcaa
     1741 gttgatagcg cagcagtaaa agcaaatatt aaattcggcc aagccgttca agttctcgat
     1801 gatgaggcta gcccgttgga ggctacaggt gatttttatg gagtcgctgt ggcaaagaac
     1861 tacgtagatg agtatacaga tgataaagta ggtgtttata aaccttctga agcggtgccg
     1921 gtgttacgac aagggacaat tacagttatt gtggatgagg atgtgaaatc tggagaaaaa
     1981 gcagttgtta atacagatac ctctaatttc ttaccttcta caacagcaaa aacaactaaa
     2041 acaggtgtaa ttggtgtatt taaatcaaca acatctaaag atggattagc aaaattagaa
     2101 attaatctgc cttaaaggca aaaggaggaa gaacaatgcc aggaaaaatt acagcaacaa
     2161 ttgaagcacg tgacttacaa gctattgaca atgttattta tgaaccgaaa caagaagaat
     2221 taaccgcacg gagcgtattc ccgcaaaaat tcgatgtgaa cgaaggcgca gaatcgtatt
     2281 catttgatgt tatgacacgt tccggagctg ctaaaataat tgcgaacgga gcagatgacc
     2341 ttccacttgt tgatgtggac atggtacgta agtccgtacc tatctattct atcggtattg
     2401 gattgtccta tacagtacaa gatttgcgtg ctgctcgtat gcaaggaact acagtagatg
     2461 ctgcaaaagc ggcaacagtt cgtagagcaa ttgcagaaaa agaaaactct attgctttta
     2521 gaggagaaaa gaaatatgca atcaaagggg catttgaagc tacaggcatt cagattgatg
     2581 tatctccgac aaccggagta ggaaatgttt ccaaatggga aaagaaaacc gcagaacaga
     2641 ttattgatga aattggagcg gctcatacta aaattactgt tttgccggga tatggtacag
     2701 cttcactaaa actatgctta ccaccgaagc aattcgaatt aattaataaa aaacgttaca
     2761 gtaacgaaga ttctcgctct gtactgaaag ttctacagga taacgcttgg ttttctgcta
     2821 ttgttcgtgt gcctgattta gctggtatgg gtacttcgag ttctgacagt tttgcggtaa
     2881 ttcatgactc aaacgaaaca gcggagttaa ttattccgat ggatattact cgtcatccag
     2941 aagaatattc tttcccgcgc acgaaagttc cgtttgaaga gcgcacagct ggcgtagtgg
     3001 ttcgattccc agccgctatt gttcgtgtcg atggtattta agaattacta ggaggaataa
     3061 acaatgatta ttgaaaacaa aggtgactac gtacgttttt taggaaaagt tagattagtt
     3121 ccaggaacaa acaatattga taatgaacat gctgaagaat tagaacaagc gcttaaacat
     3181 ccgcttaata tacacttgat tgagtcggat gaattaaaag tacccgacaa tttacaacaa
     3241 gattctagcc ttaatgattt caatgctacg aaagcggcat tgctagtcaa ggatactttt
     3301 gatttaggag ccttaaacga atttttagca gaagagacta caaacggaaa tcggaaaact
     3361 gtaatcgatg ctattaataa gcaaattgaa tcaattagca atccgccaca agaagaacga
     3421 tatgttcctg aagaggattt tggtaaatga ggaggtaact catgaaaaca gacgttagta
     3481 agctcaaatt aacggcatca gcattagcaa gcgtctccga tgattctcta caagtacaca
     3541 ttgatgattc atatttagaa gtacaagaaa aaggatttcc tgaaaaattc gaagaaagag
     3601 caaatagata ccttgctgca catcttgcaa cattagcaaa taaaaatgtt aagtcggaag
     3661 cagtaggttc tctaaaacgg gaatattacg aagttaaagg agattctggg ctgttatcta
     3721 cagagtatgg tcaagaatat gcaagattgc ttaaggaagc gaacggtgga tcaggaatta
     3781 gcatggtggt ggtttgatga aggtaactac tgataaatct acaatgaaca aagcaattag
     3841 ggagctggat cagctagacc gttatagctt gcaaatcggg ctttttggtg aagatgattc
     3901 ttttattcaa atgattgctg gtgttcacga attcggttta accatacgcc cgaaaggcaa
     3961 gtatctaacc ataccaacac cagaagctgg tgataggaga gcgcgagata ttcctggtct
     4021 atttaaacca cgaggtaaaa atattcttgc tgtagcaggt cctgatggta aattgacggt
     4081 catgttctat ttaaagaaag aagttaatat tccggaacgt tcttttttga ggtccacatt
     4141 tgatgaaaaa agcaacaaat ggggagagtt gtttgaggga tggattgatg atattattca
     4201 cgggaaatta agcgccgagc aggtatataa ccgattaggc gccaaaattg tggacgatat
     4261 acaaatgaaa attgttgaga ttcaaactcc ggccaaatca gcagcgacct tggccagaaa
     4321 ccccagaaaa aacaatcctt taattgtcac cggtaaaatg aaaaatagtg ttacttggaa
     4381 ggtgatgaag tcataatgga aaaaatggtt ttccaatcat tactggacag ctttggtgtt
     4441 ccgttgacag ttcttaaaaa gcaagaaaaa ggtggagaat tcgttaacgg cgagtgggta
     4501 gtaagtcagc ttgacgaaac ttctaaaatt gaagttaatg aacccttcgt tccaagttcg
     4561 ctcatgactc aaatgcccca aacatctgca tacatggctg ctaggtatga aaagtacgag
     4621 atgatttggt tttctagtca agttctgccg ttaaaaagca aagtgatcca taaaggaata
     4681 tcgtattctg ttgaggatgc aattcctttc acagattact cagacgttac tcagtatgga
     4741 tgcaaggcgg tgagcgttag tgccaaatga tggttatgat tatggaatac ttgttaaaac
     4801 cttgattggt gctgttaatg agctttctgg tggtttacaa cttattgaaa gtgctagtgg
     4861 tggagagcaa ccagaatatc cgttttgcca atacaccata acatctcctt acattgctat
     4921 cagtcctgat atagtggaag gggagcaatt tgagattgta atctcgctta catggcgagc
     4981 tttatctggc catcaagcct taaatttggc caacattaca aataagtatt tccgctccca
     5041 aaaagggcgt ttttttatgc aagaaaatgg gggtattgtt gttgtcagtg ttcaaaacag
     5101 cgggctacgt gatactttca ttagcattga atatgagcgc tcagcaggca ttgatttgcg
     5161 attgcgtgta gtggattcgt attcaagtga gatacaagaa attgataata tcagttttac
     5221 aaatgagaat ctaggaggat aaaaaaatgg tagaaactat tacagatgta agagtacaca
     5281 tttctgtatt gtatccgtca cctcgcattg gacttggtcg tcctgcgatt tttgtcaaag
     5341 ggacagcgat gggttacaag gaatacacta ctctcgaaga attgaaagat acgtttgcag
     5401 atactacaga agtctatgcg aaagcaaaag cagtgtttct tcaaaaagat agacccgaca
     5461 cggtggcagt catcacttac gaggatacga aattattaga agctgcagaa gcttatttct
     5521 tgaaatcttg gcattttgct ttgcttgcag agtttaaagc tgcggatgct cttgcattat
     5581 caaacttgat cgaagaacag aaatttaaat ttgcggtgtt ccaagttaca gctgtcgctg
     5641 atattacacc acttgcaaaa aacacacgta ctatagcaat tgttcacagc aaaactggag
     5701 aaaaactaga tgcagcgcta attgggaatg tagcaagttt gccggttggt tccgcaacat
     5761 ggaaaggccg tcatggactt acaggaatca catcagaaga gctaaaagta tctgaaattg
     5821 atgcaattca aaaagtggga ggcatgtgct atatcgaaaa agcaggcatt gcgcaaactt
     5881 cggaaggaaa aaccgtttca ggcgaattca tcgactccat tcatggtgat gattggatca
     5941 aagcaacaat tgaaactcgt cttcagaagt tgcttacaga aacagacaaa cttacttttg
     6001 atgcacgagg tattgcgcta cttcaaagtg agttgactac tgtcttaaat gaaggttttg
     6061 cgaacggaat cattgatagt aatgacgaga cgggggagcc caatttttct attactgcgc
     6121 ttcaacgttc agatttaaat gatgacgata ttgctaaacg aaactataaa gggctatcat
     6181 tccgctacaa acgttccgga gctattcatt ccgtggatgt atacggcgaa gtggaagtat
     6241 aaaaggagga ataagataat gagtgaagta atggcgacat atgatgcaaa tacagtatcg
     6301 acaattatca acggaatttc tatttttggt ttttctgatg gggatatggt ttcatgctct
     6361 aaagattcaa acaatgtaga aattaaatca gacgcacaag gtaattcgtc agcagctgtt
     6421 aataatgaca aaatgggtac gatcaaagtt gatttagctc agacatcacc ttgttatcca
     6481 aagctgattg atatagcaaa tagacagcta aaagttccta tttacgttat taatggaaaa
     6541 gaaaaaattg gtgggtctat ggcttttatt gaaaaattac cagacgcagg ttttggtaaa
     6601 agtgttggga caaggtcatt tactttcaaa gtactagatt atacacatac tgcataaaat
     6661 atattatact aagcgacctt tttggtcgct tttttaggag gaaacaacaa tggcagagaa
     6721 gaaaaataat gcaactaaaa gtgatgtagc agcagctcaa gcagcacaaa agattccgaa
     6781 agcagaaaaa aaacctttag ataaatttgg aaaaaaagaa gtgttcaaag ctagcgacaa
     6841 ggttgaatac acattccagt tccctggaac tcgcgctgca caagcaatct tagacgagtc
     6901 taagaatggc tatggcgtaa tcgtggattc tgtatattat gagcgaatta tgaaagatgt
     6961 aattgttgag cctttgggtt tggacttaga ttattgggat gaacatgaag gttatcgcga
     7021 ggttatgaat gcagctgaca actttcttgg tggattgctt aactaagttt cctaccgctc
     7081 gacaagctga acgggaagtc aataaagagt ttgatatttg gcttcctata atcgccggta
     7141 tagcaacgaa agaagaagtt gaggttgcta catcatatga attagcaatc ttatgtgagg
     7201 ttgcaagaca aaaaatagaa ctaatgaagg gtggtgtctg atatgtcagg cgcattgaga
     7261 aaaacaacaa tcgaaattga ttggaaaatc aataatcaaa tgttgcagaa agctgatgaa
     7321 gaaactgatc gcatcgttcg ctctgcggac aagatggaac ggaacttcaa tcaatctgct
     7381 aggtctgttg atggcaccac ccgtgctata cataaacagt caaatgaagt gagagagagt
     7441 gcgactcgag tagataagct tgataagaat tttaaagaag caaagaactc ggctaatcaa
     7501 tttgggaatt ctgctaaggg cgcagttgat aaaactaaaa actcggtaga ctcagcaaag
     7561 aatagcgtta ataagttaga taatgaaatt gataaaacta ctaaaaatgc taattctaaa
     7621 ttcagcgcac taaagacgac tattattgca gtaggtagcg ctttgttggt tgctggtggg
     7681 aaagcaatgt ttaattatgc atcagataca aatgagtcgt taaataaagt ggacgttgca
     7741 tttaaaggaa atgctaaaaa tgtcaaacgt tggtctaaaa caactctgga taatatcggt
     7801 cttgcgcaag ggactgcact agatttggct gcaacttacg gtgatatgtc aacatcaatg
     7861 ggattgaata cacaagaagc tgagaagatg tctacttcta tggtcgactt agccgggaac
     7921 ttagcatcat ttaagaatat tgatattgat agagcgaata cagccctaaa cggcgtattc
     7981 acaggtgaaa ctgaagcact aaaaagttta ggtattgtaa tgacccagac taacttagaa
     8041 caatttgctt tagaaacagg tgcaggaaaa gtagctaaaa gtagcacgga agttacaaag
     8101 caaaatattg cacgtgaaaa agcacaaaaa aaattaaacg aagcgataaa agaacatggt
     8161 aaaaattcat tagaagcaag ggaagcacaa aataaattac aggaaattca ggctaaaaca
     8221 agcgaaagcg caaaagttaa tttgaaagac atgaaacaag atgagctagt acgtctacgt
     8281 tataactatg ttatgaaaca gactacaaac gcgcacggag attttaaaaa cactagtgat
     8341 caagccgcaa acgcaagccg cgtattttct gaatcagtaa aagagctagc atcaaacgct
     8401 ggccagttct tgctgccagt tattacacca ttgattataa aagctagtga tttcacgaaa
     8461 aaactttcgg atatcccaag tgctgtgaaa gggatgaaag agaaatttaa gccagcgttc
     8521 gaagtgtttg aatccgtcgg cgactttttc aaaaaagacc ttattccaag tgcgaaagag
     8581 ctggcaaaaa gtatgggacc cgggttcatc gaaggcggtg ttttagcatt taaagggcta
     8641 gggatagtat taaacactac tgttattccc gcttttaaag cagttactaa atttacgcgt
     8701 gaaaatccgg atagcatgaa aagaattgct aagtatgcga ctgttggtgt ggcaggtttt
     8761 ttaggattta agttagtaaa aaacactatt gataaagtaa cagttgctat tggaaaaatg
     8821 aacagcaaac tattgagcat cggaccaagt gcagcagctg gtgcgacaga agcgaacgtt
     8881 gcaatgtcaa ctatagggac aacaacgaat ggcgcgggcg gagttgtatt acctggcgga
     8941 aaaggaaaag ggaaaattaa acttttcagt aaagctacag cagggctcaa aagcatgggg
     9001 aaattcggca agttagcatc aggagttggt gtattagggg tcggattaag tgctactgaa
     9061 cttattggaa tgaacaaaga taatgcaggt gaaaaaactg gcggttttgg aggctcgtta
     9121 gggggcatgg ctgggggcgc tgcaattggc acagctatag ccccaggtat tggtactgca
     9181 attggagggg caattggcgc ttttgccgga actgcattag gtaaagaatt agggaaatat
     9241 gttcaaaaag aaggaccaaa aatattagat aaattcaaga caggctggaa aggcttaagc
     9301 aaaattgctg aagagcatcc gattcttggg gctaatataa atgtaataaa taaaactatc
     9361 gatgcagcaa aaaaaggcat taaagcagta ggagacacac ataaagctgt ttggaatatc
     9421 tcgaaagcga tggttgcaga ccctctcaaa atcgatgcgg gtggaaaagg cgtttctaaa
     9481 gactctgcca aagcaatgaa taaatattta agcgctgagc aaaaacttca aaatgatagt
     9541 acatctagaa tagtagacgg aaaatctata agtggaaatg aatataaaga aaatatgaaa
     9601 acacatgaca atatgtctat tcagcttgtt aatgcaactg ataaaaaatc ggttaaggcg
     9661 aataatgatt gggatagatt agtcgcgtcg ggagctgttt ccaaagatgt ggctagcgcg
     9721 aagaagcaca ctaataatga aacggcatca ataaataaag ctgatattaa gaaaaacaca
     9781 gaggaattaa agagattaga aaaaagtaga tttgaagagc agagaaaaat agaagagaat
     9841 gctgctggag caatcttaaa aatcaaagaa aatgcaaaga aaaaaggagt taaactttca
     9901 aaagaagaaa aagttgaaat agaacaaatt aacaaagata aagtaacggc aattcaagta
     9961 agcgagtcta cttactctaa aaaaagtgct gagattcaaa agaaacaaag aaaagaagct
    10021 acaatagcgc tttctaaatc agcaaaagaa caaaagataa tactagggaa tttagaaaac
    10081 tctaaaagcg aaatgtctgc aaaagctgct gcttctgttg tgaaaaattc tgcaaaacaa
    10141 cgcaatgcta ctgtaaaaga agccaataaa gaatttaaag atacgaaaag aattttagat
    10201 gaaaaaagat ttgttacggg ggaaataggc gagaaagaat atcgtgaggc aataaaacaa
    10261 gctaagaaga aaaaagatgg cacaattgat gaagcagaaa aaatgcacaa agaagtagtt
    10321 aatcaagctc agaaacaagc gaaaggacat ttgaaagaag tcgactggga aacaggggaa
    10381 actctaagta aatgggatca atttaaaaaa gcgacatcag aaacgtttaa cagtataaaa
    10441 gatgcagcac ttggaaaatg gaatgagttg tcatctgcga cagttaatat tttcggtgga
    10501 atgaaagatg catctttacg cgtgtgggat agttttaaga ctaatttgta caaaatggtt
    10561 aacaatgtga ttacagctgt caataaagta ctgtcgttct ttagcattgg ttcaataccc
    10621 ttgttaggaa acggaaatat tggagctagt caagaaaaca agttgtcggc aaaagataaa
    10681 aaaacatatc attctacttc gcaatcagga aatttggcta tgaattatac gggttctgat
    10741 agtgcagctg gtcagatcat ggctggtgag gaaggttttg agatagctta taacaagaac
    10801 tcagcacaag caagaatcct tggtaagaat ggaccggaaa tcactacagt agcccctgga
    10861 acaaaaatcc tcaatcatgc tgagtctaaa aaaatgatgt ccggcggaat gggcgcagga
    10921 acggttttac ctggctttgc gaaagggaca aatggagcag tagagtcact gaaaagcctt
    10981 ggttcaaatg caatagatag tgtcaaaaac gcaggtaata aagttaagga tattgcatct
    11041 tctgcttggg atttcgcaac tgatcctgtc gctggagtta acaagttgat ggcgaaatat
    11101 aataagttgc ctaataattc acctatggcg aacatggccg gcggaatgtt caaatatttt
    11161 ggtaagggcg caggcgattg gttgaaagaa aaacttgctg atgtctttat gacatctgat
    11221 gggggcggag aagggggcgg gatgttttct cctcactttg gttcaccatt tagaatgacg
    11281 tccggctatg gaccgcgaac agtgtttgga aaacaagaat ttcataaagg gatagattac
    11341 ggagctccaa cgggtacacc tcttcctgct caatatggcg ggaaagtaag tcgcgcgggc
    11401 acagctggcg gttttggtaa tttagtatct attacggctg ggaaaggtat agaaaactta
    11461 tatggtcatc tctctaaaat cttaacttct gctggttctg ttgtcaaagc aggtcaaatc
    11521 atcggtttag taggtagcac agggcgctct actggtccac atgtacacta tcaagtaaac
    11581 caaaacggta aacctgtaaa tcctagtagt agtcttgggg gtggctcatt taatggaaaa
    11641 ggtggctcta aagcagttaa cggatgggtt caacaagcaa ttggtcttac aggcgttcct
    11701 gctagctggt caaacgcatt ggccacaatt gcaatgaaag aatctaacgg aaacccgaac
    11761 gcggttaata actgggatat taacgccaag cgcggcatgg cctcacaagg tcttatgcag
    11821 acgattccag cgacattcaa cgcgtataaa atgaaaggtc atggtaatat cttaaatcct
    11881 gtagacaaca tcatcgctgc aataggatat attaaggctc gatatggaac tgtattcaat
    11941 gtacctggta ttaaggcttt ggcttcaggc aaggcttaca aaggatataa gcgtggcgga
    12001 cggccaccgg ttaatgaaac tgttttggtt ggtgaagaag gacctgagct atttgaaact
    12061 gatacggccg gaacagtcca tacagctcaa aaaacgaagc agatgttaaa caaaagttcg
    12121 agtggaacaa ctataaactt caatccaact atcaatataa ctgttgaagg tggatcaagc
    12181 gaaagcgagt cgtctattcg taaaactgtt cgagcggaaa tggaaaaatt attcgaaaaa
    12241 cttgttggaa tttatagtcc tggggaggtg tgatatttat ggtagcaaca ataggttctg
    12301 tgaaattagt aaatacaaac gaaagtgagt cttctccgtt tactattaca gataatcctg
    12361 tagaaacggg ttcgcctgtc tctgatcacg ttcaacgcga aactaagaca ctagaaatta
    12421 gcggtttttt gctaggagct actgctgaaa aagattatgc tactttaaaa agctatgcag
    12481 aaaaaggcac tatagtatca tttagaggtc gtgtatactt taaaaacgtg ctaatcagta
    12541 atctatcaaa aagttataat acaataaaaa atggttttga gattacggta tcacttaggg
    12601 atttaaggcg cgcatcgacg ccttgggtaa gaaagaaaaa gaaaagttct gggaaaaagc
    12661 aatctgtcaa atcaaaaaaa agtcctggca cttatataac agtgaaaaaa ggcgactgtt
    12721 actggaaatg gtggaagcga tatggtacaa gtatcgctca gctcaggaag tggaataagt
    12781 ggccagacag gcgtattcct attggtaaga gagcgagggt taaatagtgg ctattagaaa
    12841 ttatatacca gtggaacttg ataatattcc ggaacttttc gaatttgatt tcgatgatgg
    12901 caaaagtttt ttattcggga ttaattatgc agaatcacaa gatttgtttt ctgtcgattt
    12961 atatagtatt gaaggggaac caatcgctct gggagagcga ctagtattaa acgaacggct
    13021 ttgggcagat attatagacg atagactccc ttctgttgac ctagtacctt tagacgaatc
    13081 tgggaaagaa actaaaataa cgaaggacaa cttcacgaaa accgtgtttt tgtattttga
    13141 cgatcttgcg ccagaaatgg aattgccaac gttggataat gaggtgagta tgatatgact
    13201 caaatgctgt ggatgcgcga aatttatgtg catataaaca acggaagtga atatgctact
    13261 attcatgaaa aaaatgaagc ttcaggaagt ttaaaaatta attttagtat tcctttctcc
    13321 gatgaaccca aaccagcgga atgcgaagtt gttatatata acttatctcg caactcatct
    13381 aataaaataa aaaaaggttc tactatttcg gttacagctg gatatcaagg agataaaggt
    13441 ttgctatcac aaggtaaagt tacgaaagtg tctactgtgc caagcggtgt agacaaaata
    13501 actaccatta aattttccga aggcgtcgat tactcggata aaaaagatgt aaatattacg
    13561 ttcaaaaaag gaacgtctgc aaaatcaatt atccaaagaa tcgctaccaa agcaggaatt
    13621 aaaatttatc aaataaaact accaacgaat aagatttata aatctgggta tactgcggac
    13681 ggagatgctc tttcagtgat tgaagagata gttaaggact gtaaagcagc aatatattat
    13741 agacgaggta atttagtcat tcgatctata aaatccggtg atgatgaacg ttttacacta
    13801 aacagcagca ctggcttgat atcatcacca gaacgtttag agaacgatga atactcggga
    13861 tggagctttc agtccttgct acagcatcga attgctacag cttctatcat tacactaaaa
    13921 tctaaaaccg taaacggaac atttcgagtc aaaaatggaa tgcacaacta tgatggttct
    13981 actttcacga ctcagtgtga ggtggtatag atggcacaag atacaaagtt ctttgattca
    14041 tttattagat tagtaaattc aagtgtatca gtacttctta tgtgcagagt cgttaattat
    14101 gatgcaagca ataaacgtgc ggatgtgcag ccattgaatt taaagcccaa cggagcaaaa
    14161 cgagcgatga ttttagatgc tttagtttta aagcacacag aggaagatat ttctgaagga
    14221 aagatagtag cgatagtatt ctctgattgc gaattagata atattaatgg atcaactgac
    14281 tttaaaccag aaagctcaag acaacatagt gttaatgatg cggttgtagt gggggtatgg
    14341 gacgtatgaa agatttacta atagatagca acggagatat agtggtttca gataacgaca
    14401 tattaatgac tgatggcgta aatgatattg ttcaatgtgt caggatgata ttacagacac
    14461 gtgaaggtga attttatttt gatgagaatt caggaatgaa tcacgaaaat ctttttacga
    14521 agaagcccaa ttttgattac atcaaacaag atgtaattac ggctatagaa gaacaagaag
    14581 agcgtatatc tagtgtagat agcgttcttt ttgattttga caaagatact agaaaattac
    14641 atgtaagcat aaaaatgaca ggcttagatg gtcctgtgag tgtggaagag gtgatattaa
    14701 atgcttgacg aacacggatt taaacgaaag acatacgatg aattgcttac tgacatggaa
    14761 tcaaaagcaa aggagctttt tggtgaggat attaacttaa gctctcattc ggcactggga
    14821 gtgtttttaa gaataatcgc ttggtttatg tcccttatac atgaattagc tgagagagtg
    14881 tacaacagtg gatttataag ctctgctgac ggtgtccaac tggatagatt aggaagtaac
    14941 atcagcgttt tgcgtgagcc ggcaatgcca gcggtagtga cgttagaact tactggtaat
    15001 gctggctaca caatcgaaga aggtgttcaa ttcaagacaa agaacgatgt cgtttttgaa
    15061 atgattgatg tagttacact cgatgacaag gggcatggaa tagggcaagc tatatcacaa
    15121 atctattcag acaaagcaaa tgttcctgct aattctatta cagttgtagc agaaccaagt
    15181 gaagatattt taacagttaa taaccctaac aaggccgatg gtggttcaga aaaagaaaat
    15241 gatacaagct acagggcaag gataagatta gctactagtg caagtcctgg tccaccggta
    15301 aacggaatta tctcagcttt aaatcaagta tcaggtgtta gaagtgtatc aataatagaa
    15361 aataatagta ttgatttgga cgcgtataat aaccctgcta aatcagttca tatttactgt
    15421 ctcggaggaa ttgacgaaga aattggtgaa gcgattttta atagtgtcgc tgctggaata
    15481 caaacggttg gtaaagtaac ggttaaagta aaagatttat ccggatttga gcattcagtt
    15541 tattatgatc gggctacttc tttatctata tacgctcata ttatcgtcga tgtaaattct
    15601 aaatttgaag acgatggcgg cgacgtaata aaacaagctg tactaaatta tataaattca
    15661 ttaa
//
LOCUS       DASDYO010000071        15481 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.071, whole genome shotgun sequence.
ACCESSION   DASDYO010000071 DASDYO010000000
VERSION     DASDYO010000071.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15481)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15481)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15481
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.071"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(42..770)
                     /locus_tag="U0290_001836"
     CDS             complement(42..770)
                     /locus_tag="U0290_001836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464103.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2301877.1"
                     /translation="MAQNQTKYSFIAEEIRKRIMNHAYPLNQPIPDEITLAKEFDCSR
                     MTMKKALEVLVLEGLLYRKRGHGTFIIKSALDADRLQIHNQEVNGFTKLLNGKKVISK
                     VIEFKVIFPTEEIAERLHIEMETPIYDILRVRLVKDEPYVLEHTYMPVGVIPGINQQI
                     LEGSIYSYIQDDLNLKIASSYKQIRADKATLLDQQYLDCASDDPVVEVEQTVYLNNGL
                     AFEFSKSRHRYDKFVFTTVNIARR"
     gene            complement(814..2208)
                     /locus_tag="U0290_001837"
     CDS             complement(814..2208)
                     /locus_tag="U0290_001837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464102.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2301878.1"
                     /translation="MTYKFPENFWWGSAASGPQTEGAANVDGRKPSIWDHWYKIEPGR
                     FFNDVGPTNTSNFYYQYKEDIALMKQTGHNSFRTSIQWSRLIPDGIGEVNPKAVDFYN
                     RVIDEMLANDVEPFMNLYHFDMPMSMQEKGGFESREVVDAYATFAKTCFELFGDRVKH
                     WFTFNEPIVPVEAGYLYDMHYPNVVDFKRATQVAYHTTLAHALAVKEFHALEIPEGQI
                     GIILNLTPSYPRSQNPADLKAAHIADLIFNRSFLDPVTKGEFPADLVEIIREHDALPE
                     YTEEDLAIIKNNIIDILGVNYYQPRRVKAKEYAAHPDAPFMPEHLFDNYEMPYRKMNP
                     YRGWEIFERAIYDIAINLRDNYDNIPFFISENGMGVEGESRYRNADGMIEDTYRIDFI
                     KSHLKWLHKAIEEGSNCHGYHLWTFMDCWSWANAYKNRYGLVEVDLDNNFKRTIKASG
                     HWYKELSENNGFED"
     regulatory      2329..2430
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00167"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="purine riboswitch; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="guanine and/or adenine"
                     /db_xref="RFAM:RF00167"
     gene            2524..3819
                     /locus_tag="U0290_001838"
     CDS             2524..3819
                     /locus_tag="U0290_001838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464101.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NCS2 family permease"
                     /protein_id="HEM2301879.1"
                     /translation="MDKFFKLRENKTTVRTEILAGLTTFLSMAYVLFVNPSMLATTGM
                     ELKAVFVATILASVVGSLAMGLIANYPIGLAPGMGLNAFFAYTVCAQWGIPWQTALAG
                     VLVSGLVFICLTISGLREKIVNAIPTELKFAVGAGIGFFIAFLGLKNAGIIVPNESTI
                     VALGDLHSGPVLLAVFGIVVTVAYMTIGWKGAIFFGMATTAVAGMLFGLIDVPTQVVS
                     SVPSMESTFGQAIIHLPDIFTPQMLIVILTFFFIDFFDTAGTLVAVATQAGFVKDNKI
                     PRAGRSLFSDSLATVFGAIFGTSTTTSYVESTAGVAVGGRTGLTAVVIAICFSLSLFF
                     SPLLGVITSAVTTPALVIVGILMIGNVAHIDWTKFEVAVPSFFVILMMVLTFSIATGI
                     AIGFIFYPITMVLKGRYKEVHPIMYVMMVLFILYFMFVV"
     gene            complement(3862..4893)
                     /locus_tag="U0290_001839"
     CDS             complement(3862..4893)
                     /locus_tag="U0290_001839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoid-associated protein"
                     /protein_id="HEM2301880.1"
                     /translation="MPDFSYAKITKLVVHFAGNKAREEGTEVSANVLADIGSEMNQTL
                     ASIFLEPFNKDEYYQFTHETDLDFNEVRTFAANMFVAEDEFLDESKKILEHLYSETTH
                     PNIKSGDVWIFFIEGCVVDGDFTNGIGIFKVENKEVFLKNDFNGREFQIGYDKGITGT
                     DLDKGCLVFNVDHDTGNKVLILDRLNRGDSVYWKDKFLSIDKITDEKFYTEGFVEVCT
                     DYIKQREESLLDKSNFVKATSEYLAGEETLNIAEFARTTIEKPEEITEFNTMVDTFER
                     ENNVRFPETFQLDEEKREKLSKKIRKTIKLGKNISVVVKDLEQLEETDFVQGYDEEKG
                     KNYMIVYYD"
     gene            4970..5266
                     /locus_tag="U0290_001840"
     CDS             4970..5266
                     /locus_tag="U0290_001840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464099.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MGMT family protein"
                     /protein_id="HEM2301881.1"
                     /translation="MIPADFEDRVYTVVRQIPRGKVTTYGQIAYMIGFPKNARLVGAT
                     LKHSKRDQITPCHRVINAAGRLVPGWEEQRELLLSEGVTFKENGHVKMKDHFWQ"
     gene            complement(5251..6078)
                     /gene="hisJ"
                     /locus_tag="U0290_001841"
     CDS             complement(5251..6078)
                     /gene="hisJ"
                     /locus_tag="U0290_001841"
                     /EC_number="3.1.3.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464098.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol-phosphatase HisJ"
                     /protein_id="HEM2301882.1"
                     /translation="MKRDGHTHTEFCPHGTHDDVEEMVLKAIELDFDEYSIVEHAPLS
                     SEFMKNTAGDKEAVTTASMAMSDLPYYFKKMNHIKKKYASDLLIHIGFEVDYLIGYED
                     FTRDFLNEYGPQTDDGVLSLHFLEGQGGFRSIDFSAEDYNEGIVQFYGGFEQAQLAYL
                     EGVKQSIEADLGLFKPRRMGHISLCQKFQQFFGEDTSDFSEEVMEKFRVILALVKKRD
                     YELDFNTAGLFKPLCGETYPPKKIVTLASELQIPFVYGSDSHGVQDIGRGYSTYCQK"
     gene            6230..7408
                     /locus_tag="U0290_001842"
     CDS             6230..7408
                     /locus_tag="U0290_001842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003729310.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase regulatory
                     subunit"
                     /protein_id="HEM2301883.1"
                     /translation="MNLNKNLPTGTRDKLFREAQAAYKIEQQVNHYFEKRGFKRIETP
                     VIEFEDVFSSEHQADAKLYRFFDEKGRLTVLRPDMTLPIGRVVSTTGVMLPLKLSYSG
                     KIFRANEDFGGEQNEQTQAGIEIIGYPSIKAEIECILSGIGVLNALEIPNFQIELGHA
                     AIYRRVIQLLNLSETAEIDFRQLIQNKSLTGIKRFVANNPSTLDDFILAIPRLFGPAT
                     AILNQAKSLTTDKGILTALREMETIVEAVSYTADISVDLGLVQDFHYYTGIIFRGYAD
                     LAADNFLSGGRYDHLLEQFTSSSSPAVGLALNLDSLTTLQNRAGIIKKQTPTTLLIHY
                     DLEALPQAEKFMQETPNSELSFFETASNAISFAKKWHIPEVVHVSSQGIQTIFQREVD
                     "
     gene            7408..8049
                     /locus_tag="U0290_001843"
     CDS             7408..8049
                     /locus_tag="U0290_001843"
                     /EC_number="2.4.2.17"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464096.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP phosphoribosyltransferase"
                     /protein_id="HEM2301884.1"
                     /translation="MKALKIALTKGRLEKDAVALLEKAGIDCSSMTDKKRKLIFHSST
                     QPISFILVKAVDVMTYVKHGVADIGIVGKDVLMEASKSHYEMLDLEIGKCQFCLASTP
                     DFDPSSYRRKIIATKYPTVASKFFREKGEDVEIIKIEGSVEIAPVLGLADAIIDIVET
                     GSTLKENGLLIYEKMYPISARLIVNKASLKQNKTQIFQLIDQLEQVIKEERAE"
     gene            8046..9329
                     /gene="hisD"
                     /locus_tag="U0290_001844"
     CDS             8046..9329
                     /gene="hisD"
                     /locus_tag="U0290_001844"
                     /EC_number="1.1.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464095.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidinol dehydrogenase"
                     /protein_id="HEM2301885.1"
                     /translation="MKILTGTVNELLNELKIETDTNTSIQVETEVKTIIEKVKTAGDQ
                     ALFDFTSKFDGVGLTELRVPAADIQAASVKIEPAFLDALQQAKVNIESFHSKQKQHAF
                     LDSEKDGVIRGQLIRPLETVGVYVPGGTAAYPSSVLMNVLPAKIAGVKRIVMITPPGE
                     NGINPYVLASAQLAGVDEIYQVGGAHGIAALAHGTESIPKVDKIVGPGNIYVATAKRE
                     VFGLVDIDMIAGPSEIVVLADENANPAFIAADLLSQAEHDILARAILITTSKKIAEET
                     QNEIDKQLENLPRKAIAQKSIETRGKIIIAATTQEMFDIMNEIAPEHLEVQLENPMNY
                     LYQIKNAGSIFLGSYASEPLGDYFAGPNHVLPTSGTAKFFSPLGVEDFTKRSAFISYT
                     KEALAKEKDAIVLLAKKEGLDAHAKAIQIRFEEEN"
     gene            9330..9914
                     /gene="hisB"
                     /locus_tag="U0290_001845"
     CDS             9330..9914
                     /gene="hisB"
                     /locus_tag="U0290_001845"
                     /EC_number="4.2.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464094.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazoleglycerol-phosphate dehydratase HisB"
                     /protein_id="HEM2301886.1"
                     /translation="MRTATKTRITAETSIELSINLDSQAESIISTGVGFLDHMLTLFA
                     KHSRITLNVKADGDTYIDAHHTVEDIGITLGLCLKEALADKASINRYGSAYVPMDESL
                     GFCALDLSGRSYLVFDAELTNPKLGDFDTELVEEFFQAVAFNTEMNLHLRVLYGKNTH
                     HKIEALFKAFGRALREAITINPEIKGVNSTKGVL"
     gene            9915..10541
                     /gene="hisH"
                     /locus_tag="U0290_001846"
     CDS             9915..10541
                     /gene="hisH"
                     /locus_tag="U0290_001846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464093.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisH"
                     /protein_id="HEM2301887.1"
                     /translation="MIVIIDYDTGNTKSISKALDFIGLQNKISSDKTEIAQADGVILP
                     GVGAYPEAMQELTRRGLDKTLKEIATAGKPILGVCLGMQLLLESSNEHSYTKGLGLIP
                     GHVEMLPDESEFAVPHMGWNQLQIKRTTPLTQNIAGEYVYYVHSYYANCPEAYIIATS
                     GYSIDIPGMINNGNIYGAQFHPEKSGQIGLEILKGFKEVIRSCKSSQQ"
     gene            10520..11242
                     /gene="hisA"
                     /locus_tag="U0290_001847"
     CDS             10520..11242
                     /gene="hisA"
                     /locus_tag="U0290_001847"
                     /EC_number="5.3.1.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464092.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1-(5-phosphoribosyl)-5-[(5-
                     phosphoribosylamino)methylideneamino]imidazole-4-
                     carboxamide isomerase"
                     /protein_id="HEM2301888.1"
                     /translation="MQIFPAIDLKNGQCVRLFQGDFSKKTVVNEDPIAQAKAFATDGA
                     TYLHIVDLDGALEGRPINLEIIQRMKKAAKIPVQVGGGIRSMAQVDYYLESGIDRVII
                     GSAALTDPDFLRAAVQKYGAKIVAGIDAKNGFVATRGWLDVSQVSYLDLAKRMEKVGV
                     ETIIYTDISRDGTLTGPNLEQMANLKEHVKVSLIASGGVSSRADLEALAQLGLYGAIA
                     GKALYNHDISMSDIVEVEQIAY"
     gene            11232..11987
                     /gene="hisF"
                     /locus_tag="U0290_001848"
     CDS             11232..11987
                     /gene="hisF"
                     /locus_tag="U0290_001848"
                     /EC_number="4.1.3.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="imidazole glycerol phosphate synthase subunit
                     HisF"
                     /protein_id="HEM2301889.1"
                     /translation="MLTKRIIPCLDVTAGRVVKGVNFVSLTDVGDPVEIAKAYNEAGA
                     DELVFLDITATVELRQTMIDVVERTAEQVFIPLTVGGGISSVSDMKELLQAGADKISL
                     NSAAIKRPELIQEGAAKFGNQCIVVAIDAKWNGTNWSVFTRGGRNDTGLDAIEWAKKA
                     VQLGAGEILLTSMDGDGTKNGYDIPLTKAISAAVSVPVIASGGCGNAAHMAEVFEKTK
                     ATAALAASIFHYGELSIKNVKTTLLEKGVNIRP"
     gene            11984..12301
                     /gene="hisI"
                     /locus_tag="U0290_001849"
     CDS             11984..12301
                     /gene="hisI"
                     /locus_tag="U0290_001849"
                     /EC_number="3.5.4.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464090.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-AMP cyclohydrolase"
                     /protein_id="HEM2301890.1"
                     /translation="MTSVDFSKGLVPTIILDDQNGDVLMLAYMNEESYQKTLETGYTW
                     FFSRSRNELWNKGATSGHTQKVKQIWTDCDNDTLLIRVTQIGPACHTGKKSCFFNLIK
                     EDF"
     gene            12302..12613
                     /gene="hisE"
                     /locus_tag="U0290_001850"
     CDS             12302..12613
                     /gene="hisE"
                     /locus_tag="U0290_001850"
                     /EC_number="3.6.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464089.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoribosyl-ATP diphosphatase"
                     /protein_id="HEM2301891.1"
                     /translation="MLNDLYEEIKLRKTQPREGSYTNYLFDKGLDKILKKVGEEATEV
                     VIAAKNNEQELIAEVSDLTYHLLVLLAEQNIPLSKIQAELQNREGKLSTTRDRKEIND
                     L"
     gene            13106..14482
                     /gene="gdhA"
                     /locus_tag="U0290_001851"
     CDS             13106..14482
                     /gene="gdhA"
                     /locus_tag="U0290_001851"
                     /EC_number="1.4.1.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464088.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-specific glutamate dehydrogenase"
                     /protein_id="HEM2301892.1"
                     /translation="MAQTSTIQNDTKAAEEYAARVFETIKLRNPGETEFHQAVEEFLN
                     SVIPALAKEPKYEANGILEQLTEPERLISFRVPWVDDSGTVHVNRGYRVQFNSAIGPY
                     KGGLRFHPSVTGSIVKFLGFEQIFKNSLTGLPIGGGKGGSDFDPKGKSDSEVMRFCQS
                     FMTELQKHIGPDTDVPAGDIGVGGREIGYLFGQYKRLRGAYDAGTITGKGLSYGGSLA
                     RTEATGYGLVYFTVEMLEAAGETIRGKKIVVSGSGNVAIYAIEKAHELGAKVVACSDS
                     AGFVYDKEGIKVETVKQLKEVERKRISEYTTIHPSAEYYAGGDVWSVPCDIALPCATQ
                     NEINADQARALVKNGVIAVAEGANMPSTLDAVDIYHENKVLFGPAKAANAGGVAVSAL
                     EMAQNSTRMSWTFQTVDEHLQNIMKDIYKNSSNAASEYGAPGNLVIGANIAGFLKVAD
                     TMISQGII"
     gene            complement(14525..15430)
                     /locus_tag="U0290_001852"
     CDS             complement(14525..15430)
                     /locus_tag="U0290_001852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464087.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEM2301893.1"
                     /translation="MSIQTIFGNGKYNWINIDTDSTDNLADFYEKYHIDDEVIAYSID
                     RNERAHFEYDQKSNTFVIVFNVPDQRKMDNHYETIPMVFIIKDKQLITITNNDNQYIT
                     RKMKRYLKESDDVTIFQFLFSSLYFIMDAFFPYVEEMDTDRRTINDKLKIKTTKKNLL
                     SLSDLETGIVYFVSASKQNAALLEQMKAHLIYRELNEVEKEQFEDALIEARQLVEMTG
                     LSSQILQQLSGTYNNILNNNLNDTMKILTALSILLTVPTIITGFFGMNMPLPLEHNTF
                     GWIVTIFISVILWFGLSFILRKLMR"
BASE COUNT         4731 a         3268 c         2827 g         4655 t
ORIGIN      
        1 agataaaatg atttctcact ttttctagtt tcttttttac tttatcgtct agctatattc
       61 actgttgtaa acacgaattt atcataacgg tggcgcgatt tggaaaattc aaacgcgaga
      121 ccattgttta aatacacggt ttgttctact tcgacaacgg gatcatcaga agcgcagtcg
      181 agatattgct gatcaagcag tgtcgcttta tccgcgcgaa tttgtttata ggaactagca
      241 atttttaggt tcaaatcgtc ttgaatgtac gaataaatcg acccctctaa aatttgctga
      301 ttgatgcctg ggataacccc aactggcata tacgtatgtt ctagcacata tggctcatct
      361 ttcactagcc gaacacgaag aatgtcatag attggtgttt ccatttcgat atgaagacgc
      421 tctgcaattt cttcagttgg aaagataact ttaaactcaa taactttact aataactttc
      481 ttgccgttca aaagtttagt gaagccgttt acctcttggt tatgaatctg taagcggtcc
      541 gcgtccagcg ccgatttgat aatgaaagta ccatgtccgc gtttacgata tagtaagcct
      601 tcaagaacaa ggacttccag tgcttttttc attgtcattc gactacaatc aaactctttc
      661 gccaaagtta tctcatcagg aataggttga ttaagcggat aggcgtgatt cataattctt
      721 ttgcggattt cttcagcaat aaagctatat tttgtctggt tctgagccac ggaagttcac
      781 ctctttacac ataatacttt tattttatca catttagtct tcaaaaccat tgttttctga
      841 aagttctttg taccaatgtc cggatgcttt tatagtacgt ttgaaattat tgtctaaatc
      901 aacttctact aagccataac ggtttttgta agcattcgcc cagctccagc aatccatgaa
      961 tgtccaaaga tgataaccat gacagttaga accttcttca atggctttat gcagccattt
     1021 caagtgactc ttaatgaaat cgattcggta cgtatcttca atcattccgt ctgcattacg
     1081 gtagcgactt tcgccttcta cacccatacc attttcagaa atgaagaatg gaatattatc
     1141 gtagttatca cgcagattaa tcgcaatatc ataaattgct ctttcgaaaa tttcccaacc
     1201 acgatatgga ttcattttgc ggtaaggcat ttcatagtta tcaaaaagat gttctggcat
     1261 aaatggtgca tccggatgag ctgcgtattc tttcgctttc acacgacgcg gttggtagta
     1321 gtttacacca agaatatcaa taatgttgtt tttaattatc gccaaatctt cttcagtata
     1381 ttctggaagc gcgtcatgtt cgcgaataat ttcaacaagg tcagctggga attccccttt
     1441 tgtaaccgga tcaaggaaac tacggttgaa aattagatct gcaatatgag ctgcttttaa
     1501 atctgccgga ttttggcttc ttggatacga cggtgttaag tttaaaatga ttccaatttg
     1561 gccttctgga atttcaagtg cgtggaattc tttaacagca agcgcatgtg ccaaagtagt
     1621 atggtaagca acctgagtcg cacgtttaaa atcaacgaca ttcggatagt gcatatcgta
     1681 taagtaacct gcttcaacag gaacaattgg ttcattaaaa gtaaaccaat gtttcacacg
     1741 atctccgaat aattcaaaac atgttttcgc aaaagttgca tacgcgtcaa ctacttcacg
     1801 gctttcaaaa ccgccttttt cttgcatcga cattggcata tcaaaatgat ataaattcat
     1861 aaatggttcc acgtcatttg caagcatttc atcaataacg cgattgtaaa aatcaaccgc
     1921 tttcggattc acttcgccaa taccatctgg aataagacgt gaccactgaa ttgaagtacg
     1981 gaaagaatta tgcccagttt gtttcattaa agcaatatct tctttatatt gatagtaaaa
     2041 attagatgta ttcgtaggtc ctacatcgtt aaagaaacga cctggttcga ttttgtacca
     2101 gtgatcccaa atactcggtt ttctaccatc tacatttgct gcgccttctg tttgtgggcc
     2161 ggacgccgca cttccccacc aaaaattctc tggaaattta taagtcattt ttctacctcc
     2221 aactattatt tgcttttatt ataccttatt tatttaaaag tataaactta tttatttaaa
     2281 agttcgtttt ttatttttat ttcttacacg tattgccaaa aatcggctaa tccgctacaa
     2341 taataaagtc gtataagttc ggtaatatgg accgttcgtt tctaccaggc aaccgtaaaa
     2401 tgccaggcta cgagctattg taaaatttaa tagggatttt tttgctattt ttatttatta
     2461 ttcccttttt tacctaggct ctttccgtta tgtgcgacaa cataaatagg gaggcttttt
     2521 ttaatggata aatttttcaa actacgcgag aacaagacga ctgttcgaac agaaatactc
     2581 gcggggctaa cgactttctt atcgatggct tatgtacttt tcgtcaaccc atctatgctt
     2641 gcaacaactg gaatggaatt aaaagctgtt tttgtggcga cgattcttgc ttctgttgta
     2701 ggatcgcttg caatgggact aatcgctaat tacccgattg gacttgcacc aggtatggga
     2761 ctaaatgcgt ttttcgctta taccgtttgt gcgcagtggg gaattccttg gcaaacggcg
     2821 ctggctggtg ttctcgtttc tggcttagtg ttcatttgtt taactatttc tggacttcgc
     2881 gaaaaaatcg ttaatgcaat cccaacggaa ctaaaattcg cagtgggagc aggtattggt
     2941 ttttttatcg cctttttagg gcttaaaaat gctggaatta ttgtgccaaa tgaatctact
     3001 attgtagcgc ttggtgactt acattctggc ccagtgttac tggctgtttt cgggattgtt
     3061 gttactgttg cttacatgac aattggttgg aaaggtgcga ttttctttgg aatggcaaca
     3121 accgctgttg ctggaatgtt gtttggactg attgatgtgc cgactcaagt tgtttcatct
     3181 gtaccaagta tggagtcaac gtttggtcaa gcaattattc acttaccaga tatttttaca
     3241 ccacaaatgc tcattgttat tttgacattt ttcttcattg atttttttga tactgccggg
     3301 acacttgttg cggttgcgac tcaagctgga tttgtaaaag ataacaaaat tccgcgcgca
     3361 ggtcgttcgc tattctcgga ttcacttgca acagtatttg gagcgatttt cgggacttca
     3421 acaacgactt cttatgtaga atctactgct ggggttgctg ttggtggtcg gacaggttta
     3481 actgccgttg ttatcgcaat ctgtttctca ctgtcactat tcttctcgcc gcttcttggc
     3541 gtaattacaa gtgcggttac gactccagcg cttgtcattg ttgggatttt aatgattgga
     3601 aatgtcgctc atattgattg gactaaattc gaagtagctg ttccgtcctt tttcgttatt
     3661 ttaatgatgg tactgacttt ctctatcgct actggtatcg caattggttt cattttctat
     3721 ccaatcacca tggtacttaa aggacgctac aaagaagtgc atccgattat gtacgtgatg
     3781 atggtactgt ttatactgta ctttatgttc gtcgtttaga cagcaaaaaa accggggatt
     3841 ccgcatcctc ggttttttcg tttaatcata atacacaatc atatagtttt tgcctttttc
     3901 ctcgtcgtat ccttgtacaa aatcagtttc ttccagctgt tctaaatctt tcacaacaac
     3961 cgaaatattt ttgccaagct taatcgtttt acgtattttt ttcgatagtt tttcgcgctt
     4021 ttcttcatct aattggaatg tttctggaaa acggacattg ttttctcgtt cgaacgtatc
     4081 caccattgta ttgaattcgg taatctcttc cggtttttca attgtcgtgc gagcaaattc
     4141 agcaatattc aacgtctctt ctcctgctaa atattccgat gtcgctttta caaaattaga
     4201 tttatcaagc agtgattcct cgcgttgttt aatataatcc gtacaaactt ccacaaaacc
     4261 ttccgtgtaa aatttctcat cggttatctt atcaatactc aaaaacttat ctttccaata
     4321 aaccgaatcg ccgcggttaa gccggtctaa aatcaacact ttatttcccg tgtcatgatc
     4381 cacattgaaa accaagcaac ctttatctaa atccgtcccg gtaatccctt tatcatagcc
     4441 aatttggaat tctctgccat tgaaatcatt tttaagaaaa acttctttgt tttcgacttt
     4501 aaaaatcccg attccgttcg tgaaatcacc atcgacaacg cagccctcaa taaagaaaat
     4561 ccaaacatcg ccacttttaa tattcgggtg ggttgtttcg ctatataaat gctctaaaat
     4621 cttcttggat tcatccagaa actcgtcctc cgcgacaaac atattcgcag caaaagtacg
     4681 aacttcatta aaatccaaat ctgtttcatg cgtaaattga taatattcat ctttattaaa
     4741 tggctctaag aaaatcgaag ctagtgtttg attcatttcc gagccaatgt cagcgagcac
     4801 attcgctgat acttctgttc cttcttctct cgctttattt ccagcaaaat ggaccacgag
     4861 tttagtaatt tttgcgtatg aaaaatctgg cattccttta tcatcctaac ttttataaaa
     4921 taggtatttc ctgtatacta aatttattat gaacaaatgg aggtacgtaa tgattccagc
     4981 agattttgaa gaccgtgttt atacagtcgt gcgccaaata ccgcgcggta aagtgactac
     5041 atatggccaa atcgcctata tgattggctt tcctaaaaac gccagactcg taggtgctac
     5101 gctaaaacat tcgaagcgtg accaaattac gccttgccat cgtgtcatca atgcagctgg
     5161 tcgacttgtc cccggttggg aagagcaacg cgaactcctt ttatcagaag gtgtgacatt
     5221 taaagagaat ggacacgtca aaatgaaaga tcatttttgg caataagtgc tatatccacg
     5281 tcctatatct tgaacaccgt gcgagtccga cccatagaca aacggaatct gtaactcgct
     5341 agctaatgtc actattttct ttggtgggta tgtctctccg caaaggggct taaatagtcc
     5401 cgccgtatta aaatcaagtt catagtctcg ttttttcact aaagcaagaa tcacccgaaa
     5461 tttctccatt acttcctcag aaaaatcgct tgtatcctcc ccaaagaatt gctgaaactt
     5521 ctgacacaat gaaatatgcc ccattctccg cggtttaaaa agtcctaaat ccgcttcaat
     5581 tgactgtttt acaccttcta aataagcaag ttgcgcttgt tcaaacccgc cataaaattg
     5641 tacaattcct tcattataat cctccgctga aaaatcaatc gaacgaaaac caccttgccc
     5701 ctctaaaaaa tgcagcgaca acacaccatc atccgtttgt ggtccatact cattcaaaaa
     5761 atcccgcgta aaatcctcat aaccaatcaa ataatccact tcaaacccga tatgtattaa
     5821 taaatcgctc gcatattttt tctttatatg gttcattttc ttaaaataat aagggagatc
     5881 actcattgcc atactagccg ttgtcacagc ttccttgtcc ccagctgtat ttttcataaa
     5941 ttcactcgaa agtggcgcgt gctctactat agaatactca tcaaaatcca gttcaatcgc
     6001 ttttaaaacc atttcttcca cgtcatcatg cgtaccatgt ggacaaaatt ctgtgtgcgt
     6061 atgcccgtct cttttcatat tcaaccctct ttcaaaattc ttttccctaa gtgctctaaa
     6121 tggtacacta attataccat aagcaactat ttttctattc attatttaca aaaacacttt
     6181 aacgtgctaa tatgctaata aactaaaata tcgtaaagga gctaaccaga tgaacttaaa
     6241 taagaactta ccaaccggaa cacgtgataa actctttcgt gaagcacaag ctgcatacaa
     6301 aattgagcaa caagtgaatc attattttga aaaacgtgga tttaaacgta ttgaaacacc
     6361 tgttatcgag tttgaagatg tcttttcttc tgaacatcaa gccgatgcga agttataccg
     6421 tttctttgac gaaaaaggac gtttgacagt tctacgtccg gacatgaccc ttccaattgg
     6481 tcgagttgtg agtacaactg gtgtgatgct ccctctaaaa ctttcttata gtggaaaaat
     6541 ttttcgtgcc aatgaagatt ttggtggcga acaaaacgaa caaacgcaag ctggaattga
     6601 aatcattggc tatccttcga ttaaagcaga gattgaatgt attttaagtg gaatcggggt
     6661 tttaaatgct ctagaaattc cgaattttca aattgaactc ggacatgcag caatttatcg
     6721 tcgtgttatc caacttttaa atctctccga aacagctgaa attgattttc gccaactaat
     6781 tcaaaataaa agcttaactg gtattaaacg atttgttgcc aataatccaa gtacacttga
     6841 cgattttatt ctagccatac caagattatt tggcccagcg acagctattt taaaccaagc
     6901 aaaaagttta acgactgaca aaggaatttt aacggcactg cgcgaaatgg aaaccattgt
     6961 ggaagctgtt tcttacacag cagatattag tgtcgattta ggactcgtac aagattttca
     7021 ttattataca ggtataattt ttagaggata cgctgacctt gctgctgata attttttaag
     7081 cggcggccgt tacgatcacc tactagaaca attcaccagc tcttcctccc cagcagttgg
     7141 tttggctctt aatctcgact ccctcacaac tctacaaaac cgcgctggca tcatcaaaaa
     7201 acaaacgcca acaactcttt tgatccacta cgaccttgaa gcactcccac aagcagaaaa
     7261 attcatgcaa gaaacaccaa atagtgaatt aagttttttt gaaacagcat caaacgccat
     7321 ctcttttgca aaaaaatggc atattcccga agtcgttcac gtctcgagcc aaggcatcca
     7381 aactattttc caaagggagg tggactgatg aaagctctaa aaattgctct aacgaaaggt
     7441 cgactggaga aagacgcagt ggcacttttg gaaaaagctg ggattgactg ttcttctatg
     7501 acagataaaa agcgtaaact aatttttcat agtagcactc aaccaatctc ttttatttta
     7561 gtaaaagcgg tcgatgtcat gacttacgta aagcacgggg ttgcggatat tggcatcgtt
     7621 ggtaaagacg ttttaatgga agcatctaaa tcccattatg aaatgctcga ccttgaaatc
     7681 ggcaaatgcc agttttgcct tgcttctaca cctgactttg acccgagcag ttatcgacga
     7741 aaaatcatcg caaccaagta tccaactgtt gcttccaaat ttttccgtga aaaaggcgaa
     7801 gatgtagaaa ttatcaaaat cgaaggatcc gtcgagattg ctccagtgct tggtcttgct
     7861 gatgccatca tcgatatcgt cgaaactggc tccactttaa aagaaaacgg cttacttatt
     7921 tatgaaaaaa tgtatccaat ctccgcccgt ctgattgtca ataaagcttc cttaaaacag
     7981 aacaaaacgc aaattttcca attaatcgac caattagaac aagtgataaa ggaggagcgc
     8041 gctgaatgaa aattttaacc ggaacagtaa atgagctatt aaacgagctc aaaatagaaa
     8101 ctgatacgaa cacttccatc caggtggaaa ccgaagtaaa aacgattatc gaaaaagtca
     8161 aaacagctgg cgaccaagcc ctatttgact tcacatccaa gtttgacggc gtagggctca
     8221 ccgaactccg cgttccagcc gctgacatcc aagctgcaag cgtaaaaatc gaacctgcct
     8281 tcttagacgc gctccaacaa gcaaaagtaa atatcgaaag tttccacagc aagcaaaaac
     8341 aacatgcttt ccttgatagt gaaaaagacg gcgtcattcg agggcaatta attcgtccac
     8401 tagaaaccgt cggcgtttac gttcccggtg gcacagcagc ctatccttca tcggttttaa
     8461 tgaatgtgtt gccagccaaa attgccggag taaagcgaat cgtaatgatt acccctcccg
     8521 gtgaaaacgg tattaatcct tacgttctag cctcagctca actagctggt gtggacgaaa
     8581 tttaccaagt tggcggtgca cacggaatcg ccgctctagc tcacggaaca gaatctatcc
     8641 ctaaagtaga taaaatcgtc ggtcctggaa atatctatgt cgccactgcc aaacgtgaag
     8701 tattcggctt agttgatatt gacatgatag ccggtccatc cgaaatcgtc gtgctcgcag
     8761 atgaaaacgc caatcctgct tttatcgcag ccgacttact ctcccaagca gagcacgata
     8821 ttttagcccg tgctatctta atcacaacta gtaaaaaaat cgccgaggaa acacaaaatg
     8881 aaattgacaa acagctagaa aatctaccgc gaaaagcgat tgctcagaaa tctatcgaaa
     8941 cacgaggaaa aatcattatc gcagcaacca cacaagaaat gttcgatatc atgaacgaaa
     9001 tcgccccaga acacttagaa gtacaacttg aaaatccgat gaactatctc tatcaaatta
     9061 aaaacgctgg ctccattttc ttagggagtt atgcatcgga acctcttggc gactattttg
     9121 ctggcccaaa tcacgtctta cctacaagtg gtaccgcaaa attcttctct cctcttggtg
     9181 ttgaagattt taccaaacgt tccgccttta tttcttatac aaaagaagca ctcgcaaagg
     9241 aaaaagatgc tatcgtttta cttgctaaaa aagaaggtct agacgcccat gccaaagcca
     9301 ttcaaattcg ttttgaggag gaaaactaaa tgagaacagc gactaaaaca cgcattactg
     9361 ctgaaacttc tattgagctt tccattaacc tagattccca agcagaatca attatttcta
     9421 ctggagtcgg atttttggat cacatgctca cccttttcgc caaacacagc cgaataactt
     9481 taaatgtaaa agcagatggt gatacatata tcgatgcgca tcacaccgta gaagacatcg
     9541 gcatcacact cgggctttgt ttaaaagaag cacttgctga taaagcaagc attaatcgtt
     9601 acggctccgc ttatgtaccg atggacgaat cacttggctt ttgcgcacta gatttaagtg
     9661 gtcgttctta tttagttttt gacgccgaat taacaaaccc taaactcggt gattttgaca
     9721 cagaactagt ggaagaattt ttccaagcag ttgcctttaa cacggaaatg aaccttcatc
     9781 tccgcgttct ttatggcaaa aacacgcatc ataaaatcga agcacttttt aaagcattcg
     9841 gtcgtgctct tcgtgaagca atcacgatta acccagaaat caaaggtgta aattcaacta
     9901 aaggggtcct gtaaatgatt gttattattg actacgatac aggaaatacg aaaagcatca
     9961 gtaaagccct tgattttatc gggttacaaa acaaaatttc tagtgataaa acagaaatcg
    10021 ctcaagctga tggtgttatt ttgcccggag ttggtgctta tccagaagcc atgcaagaac
    10081 tcactcgacg cggattagat aaaacattaa aagaaattgc taccgctggt aaaccaattc
    10141 ttggcgtttg tcttggtatg caactattac tcgaatcaag taacgaacat agctatacta
    10201 aagggctcgg cctcattccc ggtcatgtcg aaatgctacc agacgaatcc gaatttgccg
    10261 ttccgcacat gggctggaat caattacaaa tcaaacgcac caccccgctt acacaaaaca
    10321 ttgctggaga atatgtctat tacgttcatt cttactatgc caactgtcca gaagcttaca
    10381 ttatcgcaac aagtggttat tctattgata tccctggcat gataaataac ggcaatattt
    10441 acggagcaca gttccatcct gaaaaaagcg gccaaatcgg tcttgaaatt ttaaaaggtt
    10501 ttaaggaggt cattcgttca tgcaaatctt cccagcaata gacttaaaaa atggacagtg
    10561 cgtccgtctc ttccaaggcg acttctctaa aaaaacagtt gtcaatgaag acccaattgc
    10621 ccaagcaaaa gcatttgcta cagacggcgc aacctatttg cacatcgtcg acctagacgg
    10681 tgcattagaa ggacgtccta tcaatctaga aattattcaa aggatgaaaa aagcagctaa
    10741 aatccctgtt caagttggtg gaggaattcg tagcatggcg caagtggatt attatcttga
    10801 atccggcatc gaccgcgtga ttatcggttc tgccgctcta acagatccag atttcctacg
    10861 tgcggcagtc caaaaatacg gagctaaaat tgtagcaggt atcgatgcca aaaacggttt
    10921 tgtcgcaaca agaggttggc tcgatgtcag tcaggtaagc tatttagatt tggctaaacg
    10981 aatggaaaaa gtgggtgttg agacaatcat ttacactgat attagccgtg atggcacgct
    11041 aactggacct aatttagaac aaatggcaaa tctcaaagaa cacgttaaag ttagtttaat
    11101 tgcttctggc ggagtgagca gtcgtgcaga tttggaagca ctcgcccaac tcggcttata
    11161 tggagcaatt gccggaaaag ccctttataa tcatgatatt tccatgtcag atattgtaga
    11221 ggtggaacaa attgcttact aaaagaatca tcccatgtct tgatgtcaca gcaggtcgag
    11281 tcgtcaaagg tgttaatttt gtttccttaa cagatgtcgg ggaccctgtc gaaattgcta
    11341 aagcttataa tgaagctggt gccgatgagc tcgtctttct tgatatcacg gcaactgtcg
    11401 aactccgtca aaccatgata gatgttgtgg aacgaactgc tgagcaagtt tttattccac
    11461 tcacagttgg tgggggtatc agtagtgttt ctgacatgaa agaacttctt caagccggag
    11521 ccgacaagat ttcgcttaat tccgccgcca tcaaacgacc agaactcatc caagaaggag
    11581 cagcaaaatt cggaaaccaa tgtatcgttg tcgcaattga tgcaaaatgg aatggtacaa
    11641 attggagcgt cttcacgaga ggcggtcgaa atgataccgg acttgatgct attgaatggg
    11701 ctaaaaaagc tgtacaactt ggtgctggtg aaatcctact aacaagtatg gacggcgatg
    11761 gaaccaaaaa cggttacgat attccgctca caaaagcaat ttcagcagca gtttccgtcc
    11821 cagtcattgc ttcaggcggt tgcgggaatg ccgcacatat ggccgaggtt tttgaaaaaa
    11881 caaaggcaac cgccgctctc gctgcaagca ttttccacta cggtgaacta agcatcaaaa
    11941 atgtcaaaac aaccttactc gaaaaaggag tgaatattcg tccatgactt ctgtagattt
    12001 ttctaaaggt cttgtcccaa ctattatcct agacgatcaa aatggcgacg ttttaatgct
    12061 cgcttatatg aacgaagaaa gttatcaaaa aacccttgaa actggctata cttggttttt
    12121 ttcgcgctcc agaaacgaac tttggaataa aggcgcgaca agcggacata ctcaaaaagt
    12181 aaaacaaatc tggaccgatt gtgataacga cacattactt atccgcgtaa cccaaatcgg
    12241 tccagcctgc cacaccggca aaaaaagctg ctttttcaat cttataaagg aggattttta
    12301 aatgttaaat gacctatatg aagaaattaa actgcgtaaa actcaaccaa gagaaggctc
    12361 ctataccaac tatttgttcg ataaaggcct tgataaaatt ctcaaaaagg ttggtgaaga
    12421 agcaaccgaa gtcgttattg ctgccaaaaa taacgagcaa gaattaatcg ctgaagtatc
    12481 cgatttaact tatcacttgc tcgttctctt agccgagcaa aatattccat tatcaaaaat
    12541 ccaagcagag cttcaaaatc gtgaaggaaa gctaagcacc actcgcgacc gtaaagaaat
    12601 taacgattta taaaaacatg acattttcgt aagcttagag atcattattg taagaaaaag
    12661 cgcatgattt ttaaatacat tttttatata cttgtttacg tggagagctt tcattttccc
    12721 aagagaaagc aaataatgtt agagcaataa ttctagtatc cgaattagtc ttatcccttg
    12781 gctcgcttta atattatttc tccctaatac tcccttaacc gcatccccct ggtgcggtta
    12841 tttttttatt acatcttcaa tttctacgca ttaaaaccta agcaaacgtt ctcattaact
    12901 acattttaaa aaatttcaga aaaattggtt tttatgcttg aaaatattct caacaatgtg
    12961 taaactaaca acataggtaa gaaaagttga cctacttaat gtacacaagc cgatgttctt
    13021 cttgctttat aacatcacgt gtatttacat taagttttct acttttcctt atagtcaaaa
    13081 tatttaaaca aggagcgatt atagtatggc acaaacatcc actattcaaa atgacacaaa
    13141 ggcagccgaa gaatacgcag ctcgcgtgtt tgaaacaatt aaactacgga atcctggcga
    13201 aacggaattc caccaagcag ttgaagaatt cttaaactct gttatcccag cccttgcaaa
    13261 agaacctaaa tacgaagcaa atggtatttt agaacagtta acagaacccg aacgccttat
    13321 cagtttccga gttccatggg tggatgattc tggcacagta catgtaaatc gcggttatcg
    13381 tgtccaattc aatagcgcaa ttggtccata taaaggcggc cttcgtttcc acccttccgt
    13441 tactggaagc atcgttaaat tcctcggttt tgaacagatc ttcaaaaact ccctaactgg
    13501 cttaccaatc ggtggcggta aaggtggctc tgactttgat ccaaaaggaa aatcagactc
    13561 agaagtaatg cgtttctgcc aaagttttat gactgaacta caaaaacata tcggtccaga
    13621 tacagatgtt cctgctggtg atattggtgt tggtggtcgt gaaattggct acttattcgg
    13681 tcaatacaaa cgtcttcgcg gtgcgtatga tgccggtaca attacaggta aaggcctttc
    13741 ttacggcgga agtttagctc gtacagaagc tacaggatac ggtcttgttt atttcaccgt
    13801 tgaaatgtta gaagcagccg gtgaaaccat tcgcggcaaa aaaatcgtcg tttctggttc
    13861 aggtaacgtt gcgatttatg caatcgaaaa agcacacgaa ttgggcgcta aagtagttgc
    13921 atgtagcgat tctgctggtt ttgtttatga caaagaaggt atcaaagttg aaacagtaaa
    13981 acaattaaaa gaagtagaac gtaaacgtat tagcgaatac acaaccattc atccatctgc
    14041 agaatattac gcaggcggcg acgtatggtc cgttccatgt gatatcgcac taccatgtgc
    14101 aactcaaaat gaaatcaacg ctgaccaagc tcgtgccctt gtaaaaaatg gtgttatcgc
    14161 tgttgcagaa ggcgcaaaca tgccttctac tcttgatgca gtggatattt accacgaaaa
    14221 taaagttcta ttcggtcctg caaaagctgc caatgctggt ggtgttgccg tatcagcact
    14281 tgaaatggca caaaacagca cacgtatgag ctggactttc caaacagtcg acgaacattt
    14341 acaaaacatc atgaaagata tttataaaaa ttcaagcaat gctgcaagcg agtacggcgc
    14401 acctggtaac ctagttatcg gcgcaaatat cgccggattc ctcaaagtag cagacacaat
    14461 gatttctcaa ggtattattt aattcaaaaa gcccttcttt ctatccgaaa gaagggcttt
    14521 tttgttatct cattaatttt cgtaaaataa aggaaagtcc gaaccataga atcacactaa
    14581 taaaaatcgt cacaatccaa ccaaacgtat tatgttctaa aggaagtggc atgttcattc
    14641 caaagaagcc cgtaataata gtaggaaccg tcaataaaat ggatagcgcc gttaaaattt
    14701 tcatcgtatc attcaaatta ttgttcaaaa tattattata tgtacctgac aattgctgta
    14761 agatttgaga gctcagcccc gtcatttcca ccagttgcct cgcttcaatt aaagcatctt
    14821 caaattgttc cttttccact tcattaagct cacgataaat cagatgggct ttcatttgct
    14881 ccagaagcgc cgcattttgc ttagatgccg aaacaaaata aacaatccca gtttccaaat
    14941 cagataatga caataaattt ttcttcgtcg ttttaatttt caatttgtca ttaatcgttc
    15001 ttctatccgt atccatttct tccacatatg gaaaaaaagc atccataata aaatacaaac
    15061 tactaaataa aaattgaaaa atagttacgt catctgattc ttttaaataa cgcttcattt
    15121 ttcgtgtaat atattgattg tcattatttg taattgttat caattgctta tcttttatta
    15181 taaaaaccat tggtattgtc tcataatggt tatccatttt cctttgatca ggcacattaa
    15241 acacaatgac aaaagtattg gacttctgat catattcaaa atgcgcacgt tcatttctat
    15301 caatcgaata ggcgattact tcatcatcaa tatgatattt ttcgtaaaaa tccgctagat
    15361 tatctgtact atctgtatca atattaatcc aattatattt gccgtttcca aaaattgttt
    15421 gaatggacat tttttcatcc tactttccat gaggtcataa aaaaagagag tctcattttc
    15481 a
//
LOCUS       DASDYO010000072        15374 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.072, whole genome shotgun sequence.
ACCESSION   DASDYO010000072 DASDYO010000000
VERSION     DASDYO010000072.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15374)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15374)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15374
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.072"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..789
                     /locus_tag="U0290_001853"
     CDS             <1..789
                     /locus_tag="U0290_001853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301894.1"
                     /translation="VLIIIGLYAIFLGNNMEEMFKQASGKTIGIQELVNTWVIAGILS
                     ITPVTVSLAVFSLKVHDEELSIARSFAITPASRWRIVISYIVSGLVASFLLSVVTLFV
                     GEMYIWLTGGAFLPFESWIRLIGVILINVFCCSSMMFFIASLVKKASAFSSVSTIVGT
                     VIGFIAGIYLPIGSLPATVQTAMKCFPFTYGASTIREIMTKEPLQQVFAGNTQAMDAT
                     KEMIGITIYWSDKTVTTGLSLLILSAFAVVFGVLSVILMKRQTK"
     gene            871..2439
                     /locus_tag="U0290_001854"
     CDS             871..2439
                     /locus_tag="U0290_001854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide chain release factor 3"
                     /protein_id="HEM2301895.1"
                     /translation="MSQDLQKEVASRKTFAIISHPDAGKTTITEQLLLFGGVIRSAGT
                     VKGKKSGKFATSDWMEIEKQRGISVTSSVMQFDYNGSRINILDTPGHSDFSEDTYRTL
                     MAVDSAVMVIDAAKGIEAQTLKLFKVCRMRGIPIFTFINKMDRQGKMPLELLAELEEV
                     LGIESYPMNWPIGMGKELAGLYDRYHRVIEQYRSEEDERFLPLGEDGDLKEAHAIQKS
                     LYYDQALEEIMLLDEAGNDFSRERIIAGEQTPVFFGSALTNFGVETFLRTFVDFAPSP
                     SSHESNEGVIEADNPKFSGFIFKIQANMNPAHRDRIAFIRICSGEFERGMNVTLTRTG
                     KSMKLANSTQFMADDRETVNRAVAGDIIGLYDTGNYQIGDTITNGSKKLEFEKLPQFT
                     PELFMRVYAKNVMKQKHFHKGVEQLVQEGAIQLFKTWRTEEYIIGAVGQLQFEVFEHR
                     MRGEYNSEIRMEPIGKKIARWVKEEDADEKLSTARSMLVKDRFDQPLFLFENEFAINW
                     FNDKNPDIELTSLL"
     gene            2547..2972
                     /locus_tag="U0290_001855"
     CDS             2547..2972
                     /locus_tag="U0290_001855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2301896.1"
                     /translation="MRREKTMDTLIRSIMIKSKRKMDAKVAQFGLTTQQARVLGFLND
                     NAANEIIQKDLQRIFQTRGASITSLIQGLEKKELISRKPSIRDGREKVVTLTEEGKRI
                     VDEFNESFPREDDKAKKILSADEYKIFIDLLSKIDDNTE"
     gene            3025..4386
                     /locus_tag="U0290_001856"
     CDS             3025..4386
                     /locus_tag="U0290_001856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM2301897.1"
                     /translation="MKHSDNYYLTKASIPKAIAHLSIPMMLGMSVGVIYNLINAFFIG
                     LLHDTSMLTAVTLGLPMFTVLMAIGNMFGVGGGTYISRLLGKEEGIKAKQVSAFVLYG
                     SLVLGIICAIILGFLINPVTHFLGADATSFLHTKNYTLALLICSPFIIANFALEQVVR
                     SEGASRVSMNGMIIATVVNLVFDPLLILYFDFNVVGAAVSVGLASLFSLIYYAWYLEK
                     KSEYLSIRFKWFKATKEIVQNVFKIGVSELLLSLFLIVTTLVLNHYSMIYGEGVVAGF
                     GVALRVVQLPEFICMGLYMGIIPLLAYNYGSGNIARFEKAIRATAISIGLIVLLLSSL
                     VFLFRFQVMHLFSDSQSVITLGVHIMVAMLISSLFSGFTGLFTSTFQAIGKAIPATIM
                     SVSQGIIFIPVIILGQHYFGLMGVIWSLTATEILTCIIGVTLFTIHNVKIASSAKTKD
                     LAV"
     gene            4668..5435
                     /locus_tag="U0290_001857"
     CDS             4668..5435
                     /locus_tag="U0290_001857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEM2301898.1"
                     /translation="MDTAMILEYGWVLLVLIGLEGILAADNAVVMAVMVKHLPDKQQK
                     KALFYGLMGAFVFRFGALFLISFLANVWQVQALGAAYLLYIAISHIWKHAKGKDGEKE
                     KKEKAGSGFWMTVLKVEIADIAFAIDSMLAAVALAITLPETGWGHIGGIDTGQFAIMF
                     LGGLVGLIIIRFAATQFVKLLKSYPSLETAAFLIVGWVGVKLVIYTLAHPSLGVIPHS
                     FPESTLWKLIFWGVMILIIIWGWFVSYRSKKKAETTK"
     gene            5538..6305
                     /locus_tag="U0290_001858"
     CDS             5538..6305
                     /locus_tag="U0290_001858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TerC family protein"
                     /protein_id="HEM2301899.1"
                     /translation="MDVSIWGEYALVFLVLVVLEGILSADNAVVMAVIVKGLPHDKQR
                     KALFYGLVGAFVFRFIALFLISFLVKIWEIQAIGAVYLLYLAIKHMWRLKKGKQEEVK
                     EASEAKSTSFWGVVARVELTDIAFALDSMLAAAALVVTLPDLGNFDIGGMNGGQFIVM
                     FLGGIAGLVVIRFAATQVVKLLERYPTLETAAFLIVGWVGVKMAVLTLAHPSVAIIPE
                     DFPDSAVWKLTFWSVMIIIGLGGYIIARKKEKKTKRV"
     gene            6358..7683
                     /locus_tag="U0290_001859"
     CDS             6358..7683
                     /locus_tag="U0290_001859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701805.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkH family potassium uptake protein"
                     /protein_id="HEM2301900.1"
                     /translation="MTPVQVIIAYYFIAVTISTIVLSLPFTLQKGVKVSFIDTLFTAA
                     SSVSVTGLATVDVSQTYSTAGIWVLMAIFQIGGLGVMMISTFFYLILKRRIGLKQRQL
                     IMTDTNQFTMSGMVRMLREILVLIFGIELIGALILGIYFIPLYPNFWDAMFQGLYNSV
                     SLVTNAGVDITGKSLMPFANDYFVQFISILLIIAGAIGFPVLLETRRFLFEKNTLIPF
                     RFSLFVKVTTLTYFVLLIVGGLLIWLFEYHHFFSGKSWDFGFFNSMFLSATSRSAGLQ
                     TIDSGALSISTLLLVSFLMFIGASPSSVGGGIRTTTFAITILFIYSVIRGRKHVYIFG
                     RELHQEDVRKSLAVTLVAGFLSISAIVVLMQTETASLIAVIFEVFSAFGTTGLSVGLT
                     PDLSTPGKIIIIALMFIGRVGIMYSMLSLRNKNQPKNAIRLPKEKIITG"
     gene            complement(7763..8131)
                     /locus_tag="U0290_001860"
     CDS             complement(7763..8131)
                     /locus_tag="U0290_001860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HEM2301901.1"
                     /translation="MGSRKPEIIIGLIGSIIGILVGFWIINYGDSVTDYIQTFTYLPG
                     ELGNELANLGWITLIASVVALIASLLIKSAPRGWGVILVIIGIVLFFVIGTAWIISGI
                     LITLTGLMGIFRRPVPKSKY"
     gene            complement(8161..9192)
                     /locus_tag="U0290_001861"
     CDS             complement(8161..9192)
                     /locus_tag="U0290_001861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyltransferase family protein"
                     /protein_id="HEM2301902.1"
                     /translation="MEQTALKRESYFDNAKFILIFLVVFGHFLQTFIADYAGVRVLYI
                     YIYTFHMPAFVLISGFFAKSFGKPGYLKKTMKKLILPYVFFQLIYSIFYYFLLSKDNL
                     SIQFLDPEWSLWFLLSLFFWNIMLFIFAKIKPWKSICIALFVGLVAGYFDIIGGYLSL
                     SRTLVFFPFFLVGYFLKKEHFYYLKTHFVMILGGIFIVLLLSFITFHPNLNDKWFLGS
                     KPYANFVEVKSLGLFIRALVYLISFGSIAAFFSFIPRKRLFFTKWGKNTLYVYLLHGF
                     FIKFFREGSQTDFQYSPSTFLLLFVVTFVLTVLLSSRLVKIFVQPVIELRVSMLRDVF
                     SRLTKRESY"
     gene            9378..9857
                     /locus_tag="U0290_001862"
     CDS             9378..9857
                     /locus_tag="U0290_001862"
                     /EC_number="2.1.1.63"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEM2301903.1"
                     /translation="MLKQQKSSPVGDLFITIDEKWIRNISYDEPKNWELLEGTIIEKE
                     LFQALTIQLDDYFEGKREHFDLPVLLKGTDFQQKVWQALSEIPYGVVVSYKDIAISAG
                     SPKAVQAVGQANRANPIPIIIPCHRCVKSNGELGGYNGADVDKKQYLLALEKGLSLS"
     gene            complement(9873..12041)
                     /locus_tag="U0290_001863"
     CDS             complement(9873..12041)
                     /locus_tag="U0290_001863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2301904.1"
                     /translation="MNCEKCNQNPATIQLYMNINGKRVEMPLCASCYAEVRNQANFGA
                     NEFPGASGSPFDDIFRQLSGAASQANREQRSQAQVQTQTAGGGNGLLDEFGTNLTDMA
                     KNEQLDPVIGRDKEIKRVIEILNRRNKNNPVLIGEPGVGKTAVVEGLANAIVAGEVPS
                     KLMNKEVILLDVASLVSGTGIRGQFEERMKQLIKELQERKNTILFIDEVHTIVGAGSA
                     EGSMDAGNILKPALARGDLQMIGATTLKEYRTIEKDAALERRFQPVTVSEPSTKETLT
                     ILNGLKPKYEDFHEVVYSPEALTAAVELSARYIQDRHLPDKAIDLMDEVGSKYNLSIE
                     KLDENTVSERVARLEDEKNQALQMEDYEKAAKVRDEITRLEENKTNNSFSERPVIQAS
                     DIQAIIEEKTGIPVGRLQEDEQSKMKNLESNLTGKVIGQEDAVRKVAKAIRRSRVGLK
                     SKNRPIGSFLFVGPTGVGKTELGRTLARELFGTSEAMIRLDMSEFMEKHSVSKLIGSP
                     PGYVGHEEAGQLTEKVRRNPYSIILLDEIEKAHPDVQHMFLQILEDGRLTDSQGRTVS
                     FKDTVIIMTSNAGATDTEASVGFNTTTESKLEKGSDILAKLGAYFKPEFLNRLDSVIE
                     FKSLEKDDLVQIIDLMLVDLNEMLAQEDVTIDVSKEVKEHLIDLGYDPKFGARPLRRT
                     IQEHLEDAIADSLIEQPEAKHLVATLNENKEITITEQVTV"
     gene            complement(12204..12815)
                     /locus_tag="U0290_001864"
     CDS             complement(12204..12815)
                     /locus_tag="U0290_001864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM2301905.1"
                     /translation="MKSIKIDYKLVLGLVLCALLVILTYQFPRVFWYLYGAGMLFLLS
                     FVIFNDDLKKEFSFVKGILPGIFSGIVLYIIFYIGAFIIKVMPGGLENSVEAAFNKYS
                     THSLIIWLLLIVAIIPGEEIFWRGFVLKRLNHYFNPWFSNVFAALLCMVMMFPSGNFA
                     AIIGIFVASLVWNIMYSYRPSLLMLYLSHLTFAFLLLAALPIY"
     gene            12961..13752
                     /locus_tag="U0290_001865"
     CDS             12961..13752
                     /locus_tag="U0290_001865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carotenoid biosynthesis protein"
                     /protein_id="HEM2301906.1"
                     /translation="MLEKNYKFLLWIYIFWFLGSVLLVSLHIIPPELTAVQSLFLVFT
                     GVFAAVFFIMQYGKWLGSAITLLIFVVSTCIEWMQLSYTDEYIGSTLGGSVYGIPITM
                     GFIWVGMVAGTHIIAREITLKINIDWIRGGIYSFIAATMVMIFEVLIEPITMQSKQLY
                     ITQNGFTILQLSDFINWWLLGLILHLMIYFILSLTDSWERLKYPDLKSEIVIVYWIII
                     AFFVFLSFYLDLWTSIAIIIVSNIIFTACYFFSLEKEAQPKKKSE"
     gene            complement(13753..15225)
                     /locus_tag="U0290_001866"
     CDS             complement(13753..15225)
                     /locus_tag="U0290_001866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2301907.1"
                     /translation="MKLESKKKIAIIGAGPGGLAAGMLLSQLGYQVNIYEKNDRIGGR
                     TALHRMGKYSFDVGPSALTMTHVLTSLFMDCNRNILDYVSLLPINPIHTLYFKDITFP
                     LYSDQSETKAVIQTYFPGEEAGFERFMKENTKKMLYISPLNQFNYSSLFDFFRPTTLR
                     AIPSLTLGRSLMDDLARYFNSKYLRIAFSLQMRYLGMSPWDIPAAYSIIPFSEYYYGT
                     FHPIGGQNKIVEAMQQVVTENKGKFFFNSEVTAFESNGKEITGAVLANGKTIEADYYF
                     TNLDFIYSLTNEHPDKLDNKEYSSSAFILYLGLKTVLPFSHQSIIFPENYREFAHNTM
                     HKKILSKDIAIHLTNPSATDNTMAPINHSSIRIMVPVPNNTSNIDWKKETPAFRQLVL
                     ETIKERLDLPDLESQIEEEYIITPIDWEKKYHVKHGAIFGLQHLWRQHGYLHPSKKSP
                     TFKNLFVIGAGAMSGSSLPFIIENAQIATQKFLQKEKKSE"
BASE COUNT         4656 a         2561 c         3114 g         5043 t
ORIGIN      
        1 gttttaatta ttattgggct gtatgcgatt tttttaggaa ataatatgga agagatgttc
       61 aaacaggctt ctggaaaaac gatagggatt caagaattag tgaatacttg ggtgattgcg
      121 gggattttat ccattacacc tgtgacagta tcgttagctg ttttttcttt gaaagtacat
      181 gatgaagaat taagtattgc gagaagcttt gcgataacac cagcttccag atggcgtatt
      241 gttattagtt atattgttag tggactagtt gcttccttct tgttgtctgt tgtaacactt
      301 tttgttggag aaatgtatat ttggttgact ggcggagcat ttttaccttt tgagagctgg
      361 attcgtttaa ttggggttat tttaattaat gttttctgtt gtagtagtat gatgttcttt
      421 atcgccagtt tggtaaaaaa agcgagtgcc tttagctccg tttcgacgat tgttgggact
      481 gttattggtt ttattgcagg gatttattta cccattggtt cacttccggc tacggtgcaa
      541 actgcgatga aatgttttcc tttcacatac ggagcttcta ccattcgaga aatcatgacg
      601 aaagagccat tacaacaagt ttttgcaggt aatactcagg cgatggatgc aacaaaagaa
      661 atgattggaa ttacgattta ttggagcgat aaaacagtta caacagggct tagtttactt
      721 attttaagtg cctttgcagt cgtgtttggt gtattatctg tgatcctcat gaaacgacaa
      781 acaaaataat ttttgaataa aaaatcagcc gaaattctcc tagttatgct atactaatgg
      841 aatgtgaatg aatctaggag gaaaataaca atgagtcaag atttgcaaaa agaagttgct
      901 tcacgcaaaa cgtttgcgat tatttctcac ccggatgctg ggaaaacgac gattacggaa
      961 caattattat tattcggtgg cgttattcgt tcagctggga ctgtaaaggg aaagaaatct
     1021 ggcaagtttg cgacaagtga ctggatggaa attgaaaaac aacgtggtat ctcggtaacg
     1081 agttctgtga tgcagtttga ttataatggt tcaagaatta atattttgga tacaccgggt
     1141 cactcggatt tcagtgagga tacgtaccgg acattgatgg cagtggatag tgcagttatg
     1201 gttatcgatg ctgcgaaagg gattgaagcc caaacgctaa aacttttcaa agtttgtcgg
     1261 atgcgcggga ttccaatttt tacttttatt aataaaatgg accgtcaagg gaaaatgccg
     1321 cttgaattac ttgctgaatt agaagaagtt cttggcattg aatcgtatcc aatgaactgg
     1381 ccaattggta tggggaaaga gcttgctggg ctttatgacc gctatcatcg tgtgattgaa
     1441 caatatcgtt cagaggaaga tgagcgtttc ttgccacttg gtgaagatgg tgatttgaaa
     1501 gaagcacatg ctattcaaaa atcactttat tatgatcaag cattggaaga aattatgtta
     1561 cttgatgagg ctggaaatga ttttagccgg gaacgtatta ttgccggtga acaaacacca
     1621 gtattctttg gaagtgcctt aactaatttt ggtgtagaaa ctttcttacg tacatttgtt
     1681 gattttgcgc catctccttc aagtcatgaa tcgaatgagg gcgtgattga agctgataat
     1741 ccgaagtttt ctggctttat tttcaaaatc caagcgaata tgaatcctgc tcaccgggac
     1801 cggattgcct ttattcgaat ttgttcaggc gaatttgaac gcggcatgaa tgttacgtta
     1861 acgcgaacgg gcaaaagtat gaagcttgct aactcaacgc agtttatggc ggatgaccgg
     1921 gaaactgtta atcgtgcggt agctggtgat attatcggtt tgtacgacac gggaaattac
     1981 caaattggcg atacgattac taatggaagt aaaaaacttg aatttgaaaa acttccgcag
     2041 tttaccccag aattatttat gcgtgtttat gcgaaaaatg ttatgaaaca aaagcatttc
     2101 cataaaggcg tcgagcaact tgttcaagaa ggtgcgattc aattatttaa aacgtggcgc
     2161 acggaagaat acattattgg ggctgttggt cagttgcaat ttgaagtatt cgaacacaga
     2221 atgcgtggcg aatataattc agaaattcgg atggaaccaa tcggcaaaaa aatcgctcgt
     2281 tgggtcaaag aagaagatgc ggatgaaaaa ctatccaccg ctcgaagtat gctcgtaaaa
     2341 gaccgcttcg accaaccgtt attcttattt gaaaatgaat tcgcaattaa ttggtttaat
     2401 gataaaaatc cagatatcga attaacttca ttactataat agctgcaacc tatttgtact
     2461 ttcgcaaata ggttgttttt ttgcttgaca attttttgaa atgcgctata attagttaga
     2521 attctaatta ataaggagga atactcgtga gaagagagaa aacgatggat acgttaattc
     2581 gttcgattat gattaaatcc aaacggaaaa tggacgcaaa agtagctcaa tttgggctga
     2641 caactcaaca agctagagtt ctagggtttt taaatgataa tgcggcaaat gaaattatcc
     2701 aaaaagatct tcagcgaatc ttccaaacgc gtggcgcaag tattactagc ctcattcaag
     2761 gactcgagaa aaaagaatta atttctcgta aaccaagcat tcgagacggc agagaaaaag
     2821 tggtcacttt aactgaagaa ggtaaacgaa tagtggacga atttaatgaa tccttcccgc
     2881 gtgaagatga taaagcgaaa aaaatccttt ccgctgacga gtataaaatc tttattgatc
     2941 tacttagtaa aattgatgac aatacggaat aaaaaaattt aactatatag ttagagttct
     3001 aactaatttt gagggggaac caaaatgaaa cactcagata attattattt aacaaaagcg
     3061 agcattccta aagcgatagc acatttatct attccgatga tgcttggaat gtctgtaggg
     3121 gtcatatata accttatcaa tgcgttcttt ataggcttgt tgcatgatac gtcgatgtta
     3181 accgcggtga cacttggatt accgatgttc accgttttga tggcgattgg taatatgttt
     3241 ggagtaggtg gtggaacgta tatttcgcgc ttgcttggga aagaagaggg aataaaggca
     3301 aaacaagtat ccgcctttgt tttatatgga agtttagtat taggaattat ctgcgccatc
     3361 atacttggct ttttgattaa tccagttact cattttcttg gggcagatgc aacgagcttt
     3421 ttacacacga aaaattatac gttggcgctt ttaatttgta gcccgtttat tattgcgaat
     3481 tttgctttag aacaggtggt tcggtctgag ggagcttcgc gggtttctat gaacggaatg
     3541 ataattgcta cagttgttaa tttagtattt gatccattgc ttattttgta ttttgatttt
     3601 aatgtggtgg gggccgcagt ttcggtagga ttagcaagtt tattttcgct gatttactat
     3661 gcttggtatt tagagaagaa aagtgagtat ttatcgattc gttttaaatg gtttaaagca
     3721 acaaaagaaa tcgttcaaaa tgtgtttaaa attggtgttt cagagttgct tttatcgtta
     3781 ttcctcattg tgacaacact cgttttaaat cattattcga tgatttacgg ggaaggagta
     3841 gttgcaggtt ttggcgtggc gcttcgggtg gtgcagctcc ctgaatttat ttgtatggga
     3901 ctttacatgg ggataattcc gctgttagct tataattacg gttcgggtaa tattgcgcgg
     3961 tttgaaaaag caatacgggc tactgcaatt agtatcgggc ttattgtgct cttactttcg
     4021 agtctggtat tcctcttccg tttccaagtg atgcatctat ttagtgacag tcaaagtgtg
     4081 ataacgcttg gtgtgcatat tatggttgcg atgttgatat cttctctttt cagtggattt
     4141 acggggctgt ttacgagtac ttttcaagcg attgggaaag cgattccggc tacgattatg
     4201 tctgtttcac aaggcatcat ttttatccca gtcatcattt taggacaaca ttatttcgga
     4261 cttatgggtg tgatttggtc cttaacagcg actgaaattc tgacatgtat cattggtgtg
     4321 acactattca caatccacaa tgtcaaaata gctagtagcg caaaaacgaa agacttagcc
     4381 gtttaaaaag tttgtgagaa aaattagttg acgagaagtt ctatattatg gtattattct
     4441 ctaggtaatc atatatcgtt ctttgacaaa tgtcagaggg gagtagcgct gattagcttt
     4501 ttaatcagga taaagtcgtc attacatgat agagatatca tcggttttat cacatttaat
     4561 tttaaatgtt agcgagacct ttgcctttac gggcaggtct cgcttttttg tttcttcaaa
     4621 ataggagatc tttgacattt taatagaaca aaggaggaaa agaattagtg gatacagcaa
     4681 tgattttaga gtacggttgg gtgttacttg tcctaatcgg tcttgagggg attttagcag
     4741 cagataatgc agtggttatg gctgtgatgg tcaaacatct cccagataaa caacagaaaa
     4801 aagcgttatt ttacggattg atgggtgcct ttgttttccg ttttggcgca ttattcttaa
     4861 tttccttttt ggcaaatgtt tggcaagttc aagcgcttgg tgccgcatat ttactatata
     4921 tcgctattag tcacatttgg aaacatgcaa aaggaaaaga cggagaaaaa gagaagaagg
     4981 aaaaagctgg ctctggtttt tggatgacag ttctaaaagt agagattgcc gatattgcgt
     5041 ttgcgattga ttccatgctt gcggcagtag cacttgccat tactcttcca gaaacaggat
     5101 ggggacacat tggaggaatt gataccgggc aatttgcgat tatgttctta ggtggacttg
     5161 tcggcctcat tattattcgt tttgcagcaa cacaatttgt taaattacta aaaagttatc
     5221 cgagtctcga aacagccgca tttttaattg ttggttgggt aggcgtgaag cttgttattt
     5281 atacactagc tcatccaagt cttggggtaa ttccacacag cttccctgag tcaacactgt
     5341 ggaaattaat tttctggggt gtgatgattc ttattattat atggggatgg ttcgtttcct
     5401 atcgtagtaa gaaaaaagca gaaacaacta aataattttt aatagaccag aagtgcatat
     5461 ttgtacttct ggttttacat acaaccagat gctgaaaaca caattttatg atagagtaga
     5521 aggatggtga atgaggaatg gatgtttcta tttggggcga atatgcgtta gttttccttg
     5581 ttttagtagt acttgaagga attctttccg cagataatgc cgtagttatg gcagtaattg
     5641 ttaaaggttt accgcacgat aaacaacgaa aagccttgtt ttatgggtta gtaggtgcct
     5701 ttgtttttcg ttttattgca ctatttttaa tttcattttt agtaaaaatt tgggaaatac
     5761 aagctatcgg cgcggtttat ttattgtact tagcaattaa gcacatgtgg cgccttaaaa
     5821 aaggtaaaca agaagaagtc aaagaagcat cagaagccaa atcaacttcc ttttggggtg
     5881 tagtagctcg tgtggaattg acagatattg cttttgcact ggattccatg ttagctgcag
     5941 cagcattagt agttactttg ccagatttag ggaattttga tattggggga atgaacggtg
     6001 ggcaatttat cgtgatgttc cttggtggta tcgcaggact tgtcgtaatt cgttttgcag
     6061 ccacacaagt ggttaaatta ttagagcgtt accctacact tgaaacagca gcgtttttaa
     6121 ttgttggttg ggttggtgtg aaaatggcgg ttctaacgct agcacatcct tctgtagcaa
     6181 ttattccaga agattttccg gattcagcgg tttggaagct gacattctgg tcggttatga
     6241 taataatagg tttgggtggt tatatcattg cgagaaaaaa agagaagaaa accaaaagag
     6301 tttgaatatg atcaggaagt aaaattgcgc agaagattaa aactggtgtt agcacgtatg
     6361 acaccagttc aagtaattat cgcgtattat tttattgcgg ttacgatttc taccatcgtc
     6421 ttaagcttac cgttcactct acaaaaaggg gtcaaggtgt cgtttattga tactctattt
     6481 acagcagcga gttcggttag tgttaccggg cttgcaacag tagacgttag ccagacttat
     6541 agtactgctg gaatttgggt cttaatggcg attttccaaa ttggtggact tggtgttatg
     6601 atgattagta cgtttttcta tttgatttta aaaagacgga ttggcttaaa acaacgtcaa
     6661 ttaattatga cggatactaa ccaatttaca atgagcggga tggtccggat gcttcgtgag
     6721 attctagtgc ttattttcgg tattgagtta attggagcct tgattttagg gatttacttt
     6781 attccgctgt atccgaattt ttgggacgcg atgttccaag gattatataa ttctgtttca
     6841 ctcgtaacca atgcgggggt tgatatcacc ggtaaatcgc taatgccctt tgccaatgat
     6901 tatttcgttc aatttatttc gattttgttg attattgcag gtgcgatagg ttttcctgta
     6961 ttgcttgaaa cacgtagatt tttatttgaa aaaaatacgt taattccgtt tcgcttttcc
     7021 cttttcgtga aagtaacgac gctaacttat tttgtgcttt taattgtggg tggtttactt
     7081 atttggctgt ttgaatatca tcatttcttt agtgggaaaa gttgggattt cggtttcttt
     7141 aattcaatgt tcttatctgc aacatcacga agcgcaggct tacaaacgat tgatagtggg
     7201 gcgttgtcaa tctctacgtt gttgctcgtt tccttcttaa tgtttattgg agcatcgcca
     7261 agttctgttg gtggtgggat tcgaacgaca acttttgcaa ttacgatttt attcatttat
     7321 tcggttatcc gaggtcggaa acatgtgtac atttttggtc gtgagcttca tcaagaggat
     7381 gtgcggaaat cgcttgcggt gacgttagta gcagggtttt tgagtatatc ggccatagtc
     7441 gttttaatgc aaacagagac cgcctcgtta attgccgtca tttttgaagt cttttcggcg
     7501 tttggtacta cagggctttc tgtaggtttg acaccagatt tatctacgcc gggtaaaatt
     7561 attattattg cattaatgtt tattgggcgc gttggtatta tgtactcaat gctgagttta
     7621 agaaataaaa atcaacctaa aaatgcgatt cgtttaccaa aagagaaaat tattacaggt
     7681 taatataaaa gccattctga ttgcagaatg gcttttttgt ccatgaaaaa acctcttgat
     7741 caaaatgacc aagaggtgat ttttaatatt ttgattttgg aacggggcgt ctgaaaatac
     7801 ccattaaacc agttaaagtg attaagattc cggagataat ccaagcagtt ccgataacga
     7861 agaagagcac gataccgata attactaaga taacacccca accacgtgga gctgatttga
     7921 ttagaaggga agcaattaat gcaactacag atgcgattaa tgtaatccac cctagatttg
     7981 ctaactcgtt acctaattca ccaggtaaat aagtaaatgt ttgtatataa tctgtgactg
     8041 aatctccata attaataatc caaaagccaa ctagaatccc aatgatagag ccaattaatc
     8101 cgataataat ttctggtttt cttgaaccca taatacaacc tcctttttct atctatacgt
     8161 ttaataactt tcccgttttg ttaagcggct aaacacatct cgcagcatag ataccctaag
     8221 ttcgattacc ggttgaacga atatttttac caatcgactt gataataata ccgttaaaac
     8281 aaaagtaacg acgaatagaa gtaaaaatgt tgatgggcta tattgaaagt cagtttgact
     8341 accttcacga aaaaacttaa taaagaagcc atgcaacaaa taaacatata acgtattttt
     8401 accccattta gtgaaaaata acctctttct aggaataaaa ctgaaaaaag ccgcaatcga
     8461 accaaaacta atcaagtaga caagtgcgcg aatgaataga cctaacgact ttacttccac
     8521 aaagtttgca taaggcttag aacctaaaaa ccatttatca tttaagttag ggtgaaatgt
     8581 aataaatgat agaagtaaaa caatgaaaat gcccccgaga atcatgacaa aatgcgtttt
     8641 aaggtaataa aaatgttctt tctttaaaaa atagccaact aagaaaaacg ggaaaaaaac
     8701 aagtgttcga gataaactca aatacccccc aataatatca aaatagccag caaccaatcc
     8761 aacgaagaga gcaatgcaaa tcgacttcca aggctttatt tttgcaaaaa taaataacat
     8821 tatattccag aaaaacaaac ttagtaaaaa ccaaagtgac cattcaggat caaggaattg
     8881 gatagaaaga ttgtctttac ttaaaagaaa ataataaaaa atactatata ttagctgaaa
     8941 aaacacataa ggtaaaatga gctttttcat cgtctttttt aaataaccgg gcttaccaaa
     9001 acttttagcg aaaaatccgg atattagcac gaaagcaggc atgtgaaacg tgtagatata
     9061 aatataaagc acacgaacac ccgcataatc cgcgataaat gtttggagaa aatgtccgaa
     9121 aacaactaga aaaattagaa taaacttggc attgtcgaaa taactttccc gctttaaggc
     9181 ggtttgttcc ataaaaaaca gtcctttcta ttctatgttg acaaactatt gtttatttta
     9241 ccctgaattc tgtaacgctt atccaacagt taagtaacaa aaagtatcaa atattaacag
     9301 ggcatgacag ctagttgcga atggaagagg gaagtgctat ctttaaaata ataacttaag
     9361 gggagaggag cgacagaatg ctaaaacaac aaaaatcatc gccagtgggt gatttattta
     9421 taactataga tgaaaagtgg attaggaata tttcgtatga cgagccaaaa aattgggaac
     9481 ttctagaagg aactataata gaaaaagaac tttttcaagc attaactatc caactagatg
     9541 actattttga aggcaagaga gagcattttg atttgccggt gctccttaaa ggaaccgatt
     9601 ttcaacaaaa ggtttggcaa gcattgagtg aaattccgta tggggttgtt gtgagttata
     9661 aagacattgc gatttcagca ggtagcccta aagctgtgca agcagtagga caagcgaatc
     9721 gcgctaaccc aattccgatt atcatcccat gtcacagatg cgtgaaaagt aatggagaac
     9781 ttgggggcta taacggggcg gatgtagata agaaacaata tttacttgca ttagaaaaag
     9841 gcttgagttt aagttaactc aagccttttt tattacactg ttacttgttc tgttatagta
     9901 atttctttat tttcgttaag ggttgcaaca agatgttttg cttctggttg ttcaattaga
     9961 ctgtcggcaa tcgcatcttc taggtgttct tggatagtcc ggcgtagtgg acgtgctccg
    10021 aatttagggt cataaccaag gtcaatcaaa tgttctttta cttctttaga aacatcgatt
    10081 gtcacatctt cttgagcgag catttcattt aaatcaacga gcattaagtc gatgatttgt
    10141 actaaatcgt ctttttctag ggatttaaat tcaatgacgc tgtctagacg gtttaagaat
    10201 tctggtttga agtatgcgcc taattttgct aagatgtcag aacctttttc aagttttgat
    10261 tcggttgttg tattaaagcc gaccgaagct tctgtgtcag ttgcgccagc gttacttgtc
    10321 ataatgatga ctgtatcttt aaagctcact gtacgtcctt gtgaatcagt tagtcgaccg
    10381 tcttctaaaa tttgcaggaa catatgttga acgtctggat gtgctttttc gatttcgtct
    10441 aacaaaatga tgctatacgg attgcgacga actttttctg ttaattgtcc agcttcttcg
    10501 tgaccaacat agccaggagg ggaaccgatt aatttagaga cgctgtgttt ttccatgaat
    10561 tcactcatgt ctaaacgaat catcgcttca ctagtaccaa acaattcacg agctagcgtg
    10621 cgtccaagtt ctgtttttcc gacaccagtt ggtccaacaa ataggaagga accaattggg
    10681 cgattttttg atttgaggcc aacacggcta cgacgaattg ctttagctac ttttcttaca
    10741 gcatcttctt gaccaatgac ttttccagtt aagttacttt ctaagttctt cattttagat
    10801 tgctcgtctt cttgtaagcg tcctactgga atacctgttt tttcttcaat aattgcttgg
    10861 atgtcggatg cttggatgac tggacgctct gagaaggagt tatttgtttt attttcttct
    10921 aagcgagtaa tttcatcacg aactttggct gccttttcgt agtcttccat ttgaagagct
    10981 tgattttttt catcttctaa acgggcaaca cgttcgctca ccgtattttc gtccagtttt
    11041 tcaatggata gattatattt cgagccaact tcatccatta aatcaattgc tttatctggc
    11101 aaatgacgat cttggatata acgagcgctt aattcaactg ctgctgttag tgcttctggt
    11161 gaataaacta cttcatggaa atcttcatat tttggtttta aaccatttaa aatagttagc
    11221 gtttcttttg tggatggttc gcttacagtt actggttgga aacggcgctc aagtgcggca
    11281 tctttttcga ttgtgcggta ttcttttagt gtagtagcac caatcatttg taaatcgcca
    11341 cgagctagag ctggttttag aatgtttcct gcatccatcg agccttctgc ggaacctgcc
    11401 ccaacaatcg tatgcacttc atcaataaag agaatcgtgt ttttacgttc ttgtagttct
    11461 ttaatcagtt gtttcatgcg ttcttcaaat tgaccgcgta tccctgttcc agaaacaagt
    11521 gaagcgacat ctaataagat aacttctttg ttcattaatt tgcttggaac ttctcctgcg
    11581 acaatcgcat ttgcaagtcc ttcgacgaca gctgttttac caacacctgg ttcaccaatt
    11641 aagactggat tatttttatt acggcggttt aatatttcaa tgacgcgttt aatttctttg
    11701 tcacgaccga tgacagggtc gagttgctca tttttcgcca tatctgttaa gtttgttcca
    11761 aattcatcta gtaaaccatt gccgccacca gcagtttgtg tttgtacttg tgcttggctt
    11821 ctttgttcac ggtttgcttg actagcagca ccactcaatt gacggaaaat atcatcaaac
    11881 ggggaaccgc ttgctcctgg gaactcattc gccccaaagt ttgcttgatt tctaacttct
    11941 gcataacaag aggcacaaag cggcatttct acacgcttgc cattaatatt catatatagt
    12001 tggattgttg ctggattttg attacatttt tcacagttca tatataattt cctcctttta
    12061 aaaatgagaa atgaaaggtc ttgactttga ctatctttga ccttatgact ttattatata
    12121 ctgacctatt ttgactttca agtattttgc ttattttttt tataaaaaaa acacccctaa
    12181 aaaggagcgt ttttgtgcta tttttaataa attggtaagg ctgcgagtaa caaaaacgca
    12241 aaggttagat gcgataaata tagcatgagt aggcttgggc gataggagta catgatattc
    12301 catacgagcg aagcgacaaa gataccgata atcgctgcaa agttgccact tgggaacatc
    12361 attaccatac atagtaacgc tgcaaaaaca ttcgaaaacc aaggattgaa ataatggttt
    12421 aatcgtttta atacgaagcc gcgccagaaa atttcttctc cagggataat ggccacgata
    12481 agcagtagcc aaattatcaa agaatgcgtc gaatacttat taaaagcagc ttctacagaa
    12541 ttttctagac cgcctggcat tactttaata ataaaagcgc ctatgtaaaa aataatataa
    12601 aggacaattc cggaaaaaat acctggcaaa atgcctttaa cgaacgaaaa ctcttttttt
    12661 aaatcatcat taaaaatcac aaaactaagt aaaaataaca tcccagctcc atataaatac
    12721 caaaaaacac gtgggaactg atatgttagt ataacgagta gggcgcataa aacaaggccc
    12781 agtacaagtt tataatcgat cttgatgctt ttcaaaatac tttacacctc ttcttaacaa
    12841 atacttctca tactacttta aaacaaatga aatcgtttgg caacaattaa acaaaagata
    12901 agataaaagt tgtggaattt aataaatcct atataatgaa aaaataggag tggttcatag
    12961 atgttagaaa aaaactacaa atttttactt tggatttata tattctggtt tttaggtagc
    13021 gttttgttag tatccttaca cattattcca ccagagctaa ctgcagttca atcactattt
    13081 ttagtattta ctggtgtttt tgcggctgtt ttctttatta tgcaatatgg taaatggctt
    13141 ggttctgcta ttacgctact tatttttgtt gtaagtacat gtattgaatg gatgcaacta
    13201 agttatacag atgaatatat tggttcaacg ttaggtggaa gtgtttacgg aattcctatt
    13261 acaatgggct ttatttgggt cggaatggtt gccgggacgc atattatcgc tcgggaaatt
    13321 acattgaaaa ttaatattga ctggattcgt ggaggtattt attcgtttat cgcagcaacg
    13381 atggtaatga tttttgaggt tttaatcgaa ccaattacaa tgcaatcaaa acaactttac
    13441 attacgcaaa acggcttcac gattttgcag ttatctgact ttattaattg gtggctttta
    13501 ggacttattt tacatttaat gatttacttt attttgagtt taacggatag ttgggagcgt
    13561 cttaaatatc cagatttaaa atcagaaatt gtcatcgttt attggattat tattgccttt
    13621 ttcgtatttt tgtcctttta ccttgattta tggacatcta ttgcgattat tatcgtttct
    13681 aatattattt tcactgcttg ttattttttc agtttggaaa aagaagcgca gcctaaaaag
    13741 aaatccgaat gattactcgg atttcttttc tttttgtaaa aatttctggg ttgcgatttg
    13801 cgcattttca ataataaatg gaagcgagct acccgacatc gcgcctgcac caattacaaa
    13861 taagtttttg aatgtaggcg attttttgga gggatgtaag taaccgtgct ggcgccataa
    13921 atgctgtaaa ccaaagatcg cgccgtgttt aacatgatat ttcttttccc agtctatcgg
    13981 tgtaatgata tattcttctt caatttgcga ttctaaatct ggtaaatcta accgttcttt
    14041 gatagtttct agcactaatt gacgaaaagc aggtgtttct tttttccaat caatattact
    14101 cgtattgtta ggcacaggaa ccataattcg aatactagaa tgattaattg gcgccattgt
    14161 attatcagtt gcagaaggat tagtcaaatg tatagcgata tccttagaga ggattttttt
    14221 atgcattgta ttatgcgcaa attctcggta attttcaggg aaaataattg attgatgcga
    14281 aaaaggtaac actgttttta aaccaagata aaggataaag gcagaagagg agtattcttt
    14341 attgtccaat ttatctggat gctcatttgt taaagaataa atgaaatcta aattggtgaa
    14401 ataataatct gcttcaattg tttttccatt ggcaagaaca gcgccagtta tttctttacc
    14461 attcgattca aatgctgtca cttcggaatt gaagaaaaac ttccctttat tttctgtaac
    14521 tacttgttgc atcgcttcga caattttatt ttgcccacca attggatgaa aggttccata
    14581 ataatattcg gaaaaaggaa taatactata agcagctgga atatcccatg gtgacatgcc
    14641 taaataccgc atctgtaagg aaaaagcgat gcgaaggtac ttactattaa aatatcttgc
    14701 taaatcatcc atcaacgatc gtccaagtgt caaactaggt atagcacgca aagttgtagg
    14761 gcggaaaaaa tcaaataaag aactataatt aaattgattg agcggcgaaa tatatagcat
    14821 ttttttcgtg ttttctttca taaagcgttc aaaaccagct tcttcgccag gaaagtaagt
    14881 ttggataacc gcttttgttt cagattgatc gctataaagc gggaaggtga tatctttaaa
    14941 ataaagcgta tgaattggat tgattggtaa aagcgaaaca taatccaaaa tattacgatt
    15001 acaatccata aaaagagaag tcaaaacatg cgtcatggtg agtgcagaag gtccgacatc
    15061 aaatgagtat ttacccattc tgtgtaacgc cgttcttcca ccaattcgat catttttttc
    15121 atagatgttt acttgataac ctagttgact taatagcata ccggccgcca acccaccagg
    15181 tccagctcct ataatggcaa ttttcttttt actttccaat ttcaaacgct cctttacccc
    15241 gtttatatac atataaaaaa cgcaaaaata tagagcatta tcactcggaa atgctttatt
    15301 tttgcgcgct taaaaactat tctgtttttt tattcttctg tttcttctac attttcaact
    15361 tcatcatctt cttc
//
LOCUS       DASDYO010000073        15344 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.073, whole genome shotgun sequence.
ACCESSION   DASDYO010000073 DASDYO010000000
VERSION     DASDYO010000073.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15344)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15344)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15344
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.073"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(28..1485)
                     /locus_tag="U0290_001867"
     CDS             complement(28..1485)
                     /locus_tag="U0290_001867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM2301908.1"
                     /translation="MKKKWGVIIASLCLLLGLSACGSDEKADANEVPTLKWYMIGTPQ
                     KDTEEVMKEVNKYTEEKIGVKVEMTQIDWGDYGKRMQTVINSGENFDIAYSAAGEFVS
                     YSQKGAFLPLNKYLDKEGKNMKAELNDVLWEGATIDGNIYGVPSNKEVGEQQVYVFNK
                     NLVDKYKMDVTKVKNFSDLEPMLKTIKENEPSITPIGGNKDFKPAFPYDYLIDNAVPL
                     PFAVNQYEDTGKIVNFYEQPETLDILKSLHSFYQKGYVTKDIATSTDPWSYDKENWFV
                     RIEKYQPYAENIWDKNTGGKYKVVTQPIAETPIIKNNSVTGAIQAVSVTSQHPEEAVK
                     FLDLLNTDEYLRNLVDKGIEGTHYKELDDGKIQDLPARVERYSMPTYALGNHFILKLY
                     EDEPADKWDQFKEFNRKSVASPGLGFYFDSSKVRTEIASITNVCNEFAPALLTGTVDP
                     VEYTEKFKAKLNDAGMKKVMKEMQKQYDEFRASQE"
     gene            complement(1505..2476)
                     /locus_tag="U0290_001868"
     CDS             complement(1505..2476)
                     /locus_tag="U0290_001868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2301909.1"
                     /translation="MAEQLEAVSEIEQVRGEMEKPAKNKPAKDIIGFGKKMNVAMNIM
                     LAFLALICIFPFLYIIVISFSSESSLAANGFQLIPKEWSMEAYEYLWKMKGQLLQSYG
                     ITILVTVIGTVCSVAMIALYSYAISRPQFKYRRQFTFIAFFTMLFSGGMVPAYIVMTQ
                     FLHLRNSIWAMILPLAMNAFYIMIMRTFFLRSIPEPILEAARIEGAGELRIFLQMVVP
                     LSLPGLATIALFSTLGYWNDWFQASLYIDNPNLVPLQSLLMKIENNLEFMRQNSEIAY
                     TAGAFKSIPQDGAKMAMVVISTLPIAITYPFFQKYFISGLTIGGVKE"
     gene            complement(2495..3424)
                     /locus_tag="U0290_001869"
     CDS             complement(2495..3424)
                     /locus_tag="U0290_001869"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2301910.1"
                     /translation="MKKVLSQIRANRIWLLMVLPGVLWFLVFSYLPMFGTVIAFKDYK
                     IDGKGFLSSIMSSDWVGLENFKFLFQTNDAFIITRNTVLYNLVFIIVGLFLGVALAII
                     FNSLLNKRGAKIYQTGMLFPHFLSWVVVSYFLFSFLSEDSGLMNNILLAFGQDPISWY
                     NDPKYWPFILIMMNVWKGLGYGSIVYLAAIAGIDRTYYEAAMIDGAGKWQQIRHVTIP
                     ALTPLMVILTILNVGKIFNSDFGLFYQLPRNSGPLYPVTDVIDTYVYRGLTSLGDMSM
                     SAAAGFYQSIVGFILVLLTNYIVKKINPEYGLF"
     gene            complement(3537..5021)
                     /locus_tag="U0290_001870"
     CDS             complement(3537..5021)
                     /locus_tag="U0290_001870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2301911.1"
                     /translation="MLKIVLVDDEPLILKGLESIIPEFEQSIEIVGTAKNGAIALELF
                     ANQDVDVLLTDIEMPVMNGLELIDEWKKRQPTTKTIVLSGFEDFHYVKRGLSAGIENY
                     LLKPLNEQELKETFIQIEKKQLTDSVIPREEAYYILRDNTIWRWLNLRINKEEWEERL
                     ALYDMILNSKENAVLIQIQPTKEINLTEWKNLSEQYRKDFPFMLLTPENEIIIGITEQ
                     TSISEQILAIHQDVKKRLSNEAFYLFISEKVQGEMMYPQAFRQLTRLLPERLVQEPGS
                     LIAYQKRTKHTWRPKRKQHQLAKLLVMNNEKEIKAWIQHFFKEWNDHKLESDPHQMLH
                     ILNELLVMMAESDPKELSESMGRIAEETSIEGLEEATLAYAIRYYNRKKQTDESKSPI
                     IQNVLSYITEHFAEGMSLKTLGNDFHINAVYLGQLFQKEMGEHFTDYLNRYRVNYAKE
                     ELLQTKDNLTIIAGKSGYTDMAYFYRQFKKHTGETPNRYRKIHQ"
     gene            complement(5021..6760)
                     /locus_tag="U0290_001871"
     CDS             complement(5021..6760)
                     /locus_tag="U0290_001871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM2301912.1"
                     /translation="MSMTQELPRKRVFKRMLLIFSLTSLFTVSLLLFFIYKYYTNIQL
                     DTNLQRAETIANKQLDALTEKQKALISLTQDIYRNSDLMQDVQIAMTNDYGSYTEQNI
                     DNYFKSKNFYSVDMQTYLHSYFSYDEDIIALQLISDDGSYSYTFPSRYREWKETVDTY
                     GEANIATEASKQGTFYTIENKIVVKQPINDPSTLKQMGYLLLYIDPTFLSKWITKDYQ
                     NSIFQIQNTKGVELYSNHPKKQIQTPEKQGWLHADNKKVYFQKTEDETSGLKNNTFLY
                     RVTDDSAPLIELTLFGIGLLLVIFSISINFVISRRYSKRILTIIGGMNRVEMGTLDAK
                     LPVDNNGDELTMISERFNHMTENLDAYVKKVYSLEMEEQKARLKALQGQMQPHFLYNS
                     LEAIRMNARVEGAKATSDMIYQLATLLRYTANHREITTLGEEINYVKQYVRFMEMRHE
                     QPIKLEINIEKRFNHTQIPRFALQPLIENFFKYAFKENQNPIVVITVTAENDNLQFRI
                     EDNGSGIDAEKLKEVQATIESKDETSHIGLANLNKRLQLLYGENYRLTIKSKANEGTI
                     ILFQVPQNTGGEK"
     gene            complement(6817..7428)
                     /locus_tag="U0290_001872"
     CDS             complement(6817..7428)
                     /locus_tag="U0290_001872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YesL family protein"
                     /protein_id="HEM2301913.1"
                     /translation="MKLIDKFSVISDWIIRLVWTNLVWLFLVLIGGIVLGFMPATVAL
                     FTITRKWARGDLDVPVWKSAWQTYKQVFVSANLAGAVFALIGIFLYADLRIVFELMQG
                     FWSTILYFFLMFLLFLVGIAFLQYFTVFVHFQMKNVRAYVGQAFLLAITSFKNTFMIV
                     VGLVFCAWLISKMPAFILFISGVLPSYWIMKINLHRFKQMEPK"
     gene            complement(7489..8793)
                     /locus_tag="U0290_001873"
     CDS             complement(7489..8793)
                     /locus_tag="U0290_001873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 125 protein"
                     /protein_id="HEM2301914.1"
                     /translation="MTNKVPASFNKWIEKVKMTFPENEKLHRMFEKCFTNTYTTTLQE
                     TEEGLPFVITGDIPAMWLRDSTSQIRPYLIVAEEDEEMATVIENLVKLQTNCILHDPY
                     ANAFNKSANGAGFQNDKTAMTDLVWERKYEIDSLCYPIQLAYLLWKSTNRTGHFTEEF
                     RKALHQIIEVFKIEQKHTEQSPYRFERENVRQSDTLNNNGKGTDVSYTGMSWSGFRPS
                     DDACMYGYLVPSNMFLVVVMDYVQEIAAAFYPDDKELLKDSADLRKEVAAGIETYAKQ
                     AHPYYGDVYAYEVDGTGRKLFMDDANVPSLLAAPYLGFCEKTDPAYQATRKLILSREN
                     PYFVEGSVLTGIGSPHTPDHYVWPIALSIEGLTAETEAEKQAVLEMLIAGDGGTDYMH
                     EGVNASNPAEFTRDWFAWSNAMFSEFVLSMCGVYVKGSPLSK"
     gene            complement(8797..11454)
                     /locus_tag="U0290_001874"
     CDS             complement(8797..11454)
                     /locus_tag="U0290_001874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HEM2301915.1"
                     /translation="MTRKKAHIISHSHWDREWFLPLESLRFRLVTLMDEVEALLDKED
                     GFHHFHMDGQMIMLEDYLAVKPAKREKMKQLVADGKLRIGPWYMLQDAFLTSGEANIR
                     NLQYGLEMAEEFGQVEKIGYFPDTFGLYGQVPQLMRQAGFDTVVFGRGVNPTGFNNQV
                     FDSAFASKYSEMFWESPDGSKVLGILLANWYSNGNEIPVDKEAAKVFWDKKLADVERF
                     ASTDEWLFMNGCDHQPVQTDLAEALEVARELYPEVEFIHSHFEKYQEAVKAGLAPEKL
                     QTVHGELTSQQSDGWSTLANTASSRIYLKQANAKIERLLERLAEPISVMATEAGVQYP
                     HEYLAYAWKLLMENQIHDSITGCSLDEVHREMEARFEKVEQATMAIIQNAARQITEQI
                     TTNEAGIPITVFHAGGLEATRSIELELETDAIHFSEMHFELIPDELAKLPEQSFRLET
                     STGEEIPVVVESLGIRFNYDLPERKFRDSYFARKYKLTFAVENLPAVGYETIYAHPVD
                     LVNESANQTQDLFLENRFLKVEVAANGTYTILDKEKAIEIAGVGAYEDAGDIGNEYMF
                     KETGDNLRINTLHSKPAIRVLREDKLGKTIEINHEIEIPESASSAFAEEKRRLVWHPD
                     RQSERSENFTTFKITTELTLNKHDKQLTIRVKLNNNVDDHRLRVLFPTGKQTETHQVG
                     SVFEVVTRANKQVKEWTNPAKDNRKQGFVASGNIVVASVGLPEYEVSEHGDKLELTLL
                     RAVSEIGDWGDFPAYEAECHREITAEFHVFLTDDSDVANSTIPAQVNACLTPIFAFQH
                     KSATKENILAEKRDFAEWKTEAGFVFSAFKLAKDNQPIIRFFQTASEPKQLQTMQPWQ
                     KSTILEETTGDAKKQFTASPNEIITLKGV"
     gene            11697..14807
                     /locus_tag="U0290_001875"
                     /pseudo
     CDS             11697..14807
                     /locus_tag="U0290_001875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465539.1"
                     /note="internal stop; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
     gene            complement(14876..15076)
                     /gene="cspB"
                     /locus_tag="U0290_001876"
     CDS             complement(14876..15076)
                     /gene="cspB"
                     /locus_tag="U0290_001876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cold-shock protein CspB"
                     /protein_id="HEM2301916.1"
                     /translation="MQTGTVKWFNSEKGFGFIEVEGGDDVFVHFSAIEGEGFKTLDEG
                     QSVEFEIVEGQRGPQAEKVTKL"
BASE COUNT         4443 a         3257 c         2751 g         4893 t
ORIGIN      
        1 ttagataaac taagtccttt ctggtattta ttcttgtgaa gcgcggaatt catcgtattg
       61 tttttgcatt tctttcatta cttttttcat acctgcatca tttaacttcg ctttgaattt
      121 ttccgtatat tcaacaggat caacggttcc tgtaagaagt gccggcgcaa attcattaca
      181 cacattggta atcgacgcta tttcagttcg aactttagag gagtcaaaat agaaacctaa
      241 gcccggtgat gcgactgatt ttctattgaa ctctttaaat tgatcccatt tatctgctgg
      301 ctcatcttca tataatttta gaatgaagtg atttccaagc gcatacgttg gcatgctgta
      361 acgttccaca cgtgctggta gatcttgaat tttaccgtca tctaactctt tataatgggt
      421 tccttcaatt cctttatcaa ctaaattacg taaatattca tccgtgttaa gtaaatcaag
      481 gaatttcact gcttcttccg ggtgttggct cgtaacagaa acagcttgaa tcgcaccagt
      541 tacagagtta tttttgatga taggagtttc agcaattggc tgtgtgacta ctttatattt
      601 gccgcctgta tttttatccc aaatattttc tgcatatggt tggtattttt cgattcgcac
      661 aaaccagttt tctttatcgt atgaccacgg atctgtggag gttgcgatat cttttgtgac
      721 atatcctttt tggtagaagc tatgaagcga ttttaggata tctaatgttt cgggttgctc
      781 atagaagttg acgattttgc cagtgtcttc atattgattt actgcaaaag gaagaggtac
      841 tgcattatca atcaaatagt catatgggaa agctggctta aagtctttgt tcccgccgat
      901 tggtgtgata cttggttcgt tttctttaat tgtttttaac attggttcta aatcgctaaa
      961 gttttttact ttcgttacgt ccattttata tttatcgaca agatttttgt taaaaacgta
     1021 tacttgttgc tcgccgactt ctttgttcga aggaacaccg taaatgtttc cgtcaatggt
     1081 tgcaccttcc caaagtacat catttaactc ggctttcata ttcttgcctt ctttatctag
     1141 atatttattt aatggcaaga atgcgccttt ttgtgagtaa gaaacgaatt ctcccgctgc
     1201 agagtaagca atatcaaagt tttctccgga gttaataacg gtttgcatcc gtttaccgta
     1261 gtcgccccag tcaatttgtg tcatttctac tttgacgcca attttttctt ctgtatattt
     1321 atttacttct ttcattactt cttccgtgtc tttttgtggc gttccaatca tgtaccattt
     1381 cagtgtcgga acttcatttg catctgcctt ctcatcgctc ccgcacgcgc ttaaacctag
     1441 tagcaagcag agtgatgcga tgattactcc ccatttcttc ttcattaaat tccctccatc
     1501 ttttttattc ttttacgccg ccaattgtga gtccactaat aaagtatttt tggaaaaacg
     1561 gataggtgat tgcgattggt aatgtcgaaa taacaaccat cgccattttt gcaccgtctt
     1621 gtggtatgga cttaaacgcg ccggcagtat aagcaatttc agagttttgt cgcatgaatt
     1681 ctaagttgtt ttcaattttc ataagtagcg attgtagcgg cactaaattc ggattatcaa
     1741 tataaagtga cgcttggaac cagtcattcc agtatcctag tgtagagaaa agcgcgattg
     1801 tcgcaagccc tggtaaagaa agtggaacaa ccatttgtaa aaagatccgt agttccccag
     1861 cgccttcaat tcgagccgcc tcaagtattg gttctggaat agaccgtaaa aagaacgtgc
     1921 gcataatcat aatgtaaaaa gcattcattg ctagtggtaa aatcatcgcc caaatgctat
     1981 ttcgtaagtg caaaaattgc gtcatcacga tataggcagg caccatcccg ccactaaata
     2041 gcatggtaaa aaaggcaata aatgtaaatt gacgacgata cttaaattgt ggtcttgata
     2101 tcgcgtaaga gtaaagagca atcattgcaa cactacatac cgtaccaatt actgtaacta
     2161 aaatggtaat accgtatgat tgtaatagtt gtcctttcat cttccataag tactcatacg
     2221 cttccatgct ccactctttg ggtattagtt gaaagccatt tgctgccaga gatgattcac
     2281 tagaaaaaga aataacaata atgtacaaaa atggaaaaat acaaatgagc gctaggaaag
     2341 cgagcataat attcatcgct acgttcatct ttttcccaaa accaataatg tctttagctg
     2401 gtttattttt tgctggtttt tccatttcgc ctcggacttg ttctatttca ctcactgctt
     2461 caagctgttc tgccaaagca cctcgcctcc ttttctaaaa taagccatat tctggattta
     2521 tttttttcac gatgtagttt gtgagtagca ctagaataaa gccaacgatg gactgataga
     2581 agccagctgc cgcactcata ctcatatctc caagtgacgt taaacctcgg tatacatatg
     2641 tatcaataac atccgtcaca ggataaagtg gtcctgaatt tcgcggtagt tgataaaaca
     2701 aaccaaaatc agagttaaaa atcttcccga cattcaaaat cgttaaaata accatcagtg
     2761 gcgttagtgc aggaattgtt acatgcctaa tttgttgcca tttgccagcg ccatcaatca
     2821 ttgccgcctc gtagtaggtc cggtcaattc cggcaattgc tgccaggtag acaatacttc
     2881 cataacccaa gcctttccaa acattcatca tgataaggat aaacggccag tatttcggat
     2941 cgttatacca ggaaatcggg tcctgtccga atgcaagtaa aatattattc atcagcccac
     3001 tgtcttcgct caaaaaactg aacaagaaat agctgacaac tacccatgat aaaaaatggg
     3061 ggaaaagcat tcccgtttga taaatttttg ctcctcgctt atttagtaag ctgttgaaaa
     3121 taatagcaag tgctacacca agaaacagcc caacaataat aaatactaaa ttataaagaa
     3181 cggtgtttcg ggtaataata aaagcgtcgt ttgtttggaa taggaattta aaattttcaa
     3241 gtcccaccca gtcgctactc ataatactgg ataaaaatcc tttcccatca attttgtaat
     3301 ctttgaatgc aatcactgta ccaaacattg gtaagtatga gaaaaccagg aaccaaagga
     3361 cgcctggaag taccattaaa agccaaatcc gattagctcg aatttgtgat aaaacttttt
     3421 tcaatccatt cacccctctt ttttgtaagt gctttcaaca tctttagttt atcgttttta
     3481 cgtggggtta aatagttgcg gatgtttaga tttatagaca aatattagaa ataattttat
     3541 tgatggattt ttcggtagcg atttggtgtt tcgcctgtgt gctttttgaa ctggcgataa
     3601 aaataagcca tatcggtata accagatttc ccagcgataa tggttaagtt atcttttgtt
     3661 tgcagtaatt cttcttttgc atagttcacc cggtagcgat ttagataatc cgtaaagtgt
     3721 tcgcccattt ctttttgaaa aagttgaccg agataaacag cattaatatg aaagtcgtta
     3781 ccgagtgttt ttaaagacat tccttctgca aaatgttccg tgatatagga aagcacattt
     3841 tgaataatgg ggctttttga ttcatctgtt tgttttttgc ggttatagta acgaatagcg
     3901 taggctagcg tcgcctcttc caatccctca atactcgttt cttcggcaat tctccccatg
     3961 gattcgctta actctttcgg atccgattcc gccatcatca caagcagctc attcaaaata
     4021 tggagcattt gatgcgggtc gctttccagc ttgtggtcat tccattcttt aaaaaagtgc
     4081 tggatccacg ctttaatttc tttttcgtta ttcatcacta gaagcttcgc gagttgatgt
     4141 tgctttcttt tcggacgcca agtatgtttg gtacgttttt gataggcaat taggctacca
     4201 ggctcttgca caagtcgttc tggaagcaac ctagtaagtt ggcgaaaggc ttgcgggtac
     4261 atcatttcac cttgtacttt ttcactgata aacaggtaaa aagcttcatt cgaaaggcgt
     4321 tttttcacat cttgatgaat cgctaaaatt tgttcggata tcgaagtttg ttcggttatt
     4381 cctataatta tttcattttc tggcgtaagt agcataaatg gaaagtcctt ccgatattgt
     4441 tcagaaagat ttttccattc agtcagattg atttcttttg ttggttgaat ttggatgaga
     4501 acggcatttt cctttgaatt taatatcata tcgtataatg ctagtcgctc ttcccattct
     4561 tctttgttaa ttcgtaaatt tagccaacgc caaatcgtat tgtcccgtaa aatgtaatac
     4621 gcttcttccc ttggtatcac actgtctgtc aattgttttt tctctatttg tataaacgtt
     4681 tcttttaatt cttgttcatt taaaggtttt agtaaataat tttcgattcc cgctgaaagc
     4741 ccgcgtttca cataatgaaa atcttcaaat ccggagagaa caatagtttt agtcgttggt
     4801 tgccgctttt tccattcgtc gattaattct aaaccattca ttacaggcat ctctatatcg
     4861 gtcaaaagga catctacgtc ttgattagca aataactcta aggctattgc gccattttta
     4921 gccgttccaa caatttcaat tgattgctca aattctggaa taatactttc taaacctttg
     4981 agaataaggg gctcgtcgtc tactagtaca atttttagca ttacttttct cctcccgtat
     5041 tttgaggtac ttgaaacaga atgatggtac cttcatttgc tttactcttg attgttaatc
     5101 gataattttc tccatataaa agctgcaatc gtttgtttaa attagctaga ccgatgtggc
     5161 tcgtctcatc tttactttca attgttgctt gcacttcttt taatttctct gcatcgattc
     5221 ccgaaccatt gtcttcaatt ctaaattgta aattgtcatt ttctgcagtg accgtaatta
     5281 cgactattgg attttgattt tctttaaaag catatttgaa aaagttttca ataagcggct
     5341 gcagagcaaa ccgtggaatc tgcgtatgat tgaaacgttt ttcaatattg atttccagct
     5401 taattggctg ttcgtggcgc atttccataa agcggacata ttgtttcacg taattgattt
     5461 cttcacctaa agtggtgatt tcacggtgat tagctgtgta gcgcagtagt gttgcaagtt
     5521 gataaatcat atcacttgtc gctttggctc cttctacgcg tgcgttcatc ctaattgctt
     5581 ctagtgaatt ataaagaaaa tgaggttgca tttgaccttg gagtgccttg agccgcgctt
     5641 tttgttcttc catttctagg ctatagacct tcttcacata agcatcgagg ttttctgtca
     5701 tatggttaaa ccgctcacta atcatcgtca gctcatcccc gttattatcg accggaagct
     5761 ttgcatcaag ggtccccatt tccacccggt tcatcccgcc aataatcgtt aaaatccgct
     5821 tagaataacg cctactaata acaaaattaa tgctaataga aaaaataact aataacagcc
     5881 caataccaaa taaagtaagt tcgatgagcg gcgcgctgtc atctgttact cgatataaaa
     5941 acgtattgtt tttcaagcca cttgtttcat cttccgtttt ttgaaagtat acttttttgt
     6001 tgtcagcatg aagccatcct tgtttttcag gcgtttggat ttgtttcttt gggtggttgg
     6061 aatataactc gactcccttc gtgttttgta tttgaaaaat cgagttttga taatctttcg
     6121 taatccattt gcttagaaaa gtcggatcaa tgtaaagaag cagataaccc atttgtttta
     6181 atgtgcttgg atcattaatc ggctgtttca caactatttt attttcgatt gtataaaaag
     6241 tcccttgctt tgatgcttcg gtggcgatat ttgcctcccc gtatgtatca accgtttctt
     6301 tccattcacg gtaacggctc ggaaatgtat aagagtaact cccatcatcc gaaatgagct
     6361 gcagcgcgat aatatcttca tcatacgaaa aataagaatg taaatacgtt tgcatatcta
     6421 cagaatagaa atttttactt ttaaaatagt tatcgatatt ttgctctgtg tagctaccgt
     6481 aatcatttgt catcgcgatt tgaacatcct gcatcaaatc gctattacgg taaatatctt
     6541 gcgttaaact aattaatgcc ttttgcttct ccgtaagtgc atcgagctgt ttattcgcaa
     6601 tggtttccgc tctttggaga ttggtatcta gctgaatatt agtatagtac ttataaatga
     6661 aaaaaagtaa caagctcacc gtaaaaagac ttgttaaaga aaaaattaac aacatccttt
     6721 tgaaaacgcg cttgcgtggt aattcttgtg tcatgctcat tcactgcccc ctcttctttt
     6781 ctgattattg catactatca ccaataatgt aaggggttac ttaggctcca tttgcttgaa
     6841 gcggtgtaaa ttgattttca ttatccaata acttggtaaa acaccagaaa taaacaaaat
     6901 aaaagcaggc attttcgaaa ttaaccatgc gcaaaaaaca agaccaacca caatcataaa
     6961 agtattttta aagctagtaa tcgcgagcaa gaacgcttgc ccgacataag cgcgcacatt
     7021 tttcatttgg aagtggacaa acactgtgaa atactgcaaa aacgcaattc ccacgagaaa
     7081 aagcaagaac attaagaaga agtataaaat cgtcgaccaa aaaccttgca ttaattcaaa
     7141 aacaatccgc aaatccgcat aaaggaaaat ccctatcagc gcaaaaactg cacccgctaa
     7201 attagccgaa acaaacacct gtttataagt ttgccaagca gatttccaaa ctggtacatc
     7261 taaatcgccc cgcgcccatt ttctcgttat cgtaaataaa gcaaccgttg ccggcataaa
     7321 gccaagcaca atcccgccga tcaatacgag gaaaagccat actaaatttg tccagacgag
     7381 ccggataatc cagtcgctaa taactgaaaa tttatcaata agtttcattc tttttctctc
     7441 ctttgatagt aagagaaagc ctgagttttc gcccagactt ttcttttttt atttacttaa
     7501 tgggctgcct tttacgtaca caccgcacat gcttaaaaca aattcactaa acatcgcatt
     7561 cgaccaagca aaccagtcgc gcgtgaattc agccggattc gaggcgttga caccttcgtg
     7621 catataatcc gttccgccat ctccggcaat cagcatctct aaaacggctt gtttttccgc
     7681 ttctgtttct gccgttaatc cttcgatgct gagtgcaatc ggccagacat aatgatcagg
     7741 tgtatgtgga ctaccaattc ctgtaagtac actaccttcg acaaaataag gattttctcg
     7801 gcttaaaatt agttttctag tcgcttggta tgcaggatca gttttttcgc aaaaaccaag
     7861 gtatggtgca gcgagcaagc ttggcacatt agcatcatcc ataaataatt tacgccctgt
     7921 tccatcaact tcatacgcgt aaacatcacc gtaatacgga tgcgcttgtt tcgcataggt
     7981 ttcaatccct gcagcaactt cttttcgtaa atctgcgcta tctttcagca attctttatc
     8041 atccgggtaa aacgccgctg cgatttcttg gacgtaatcc atcactacaa ctaaaaacat
     8101 attactcggt acaaggtagc catacataca tgcgtcatca cttggtctaa agccactcca
     8161 agacatacca gtatagctta catccgttcc ttttccgtta ttatttaagg tatctgattg
     8221 acgcacattt tctcgttcaa aacgatacgg actttgctct gtatgttttt gttcgatttt
     8281 aaaaacttcg atgatttgat gcaatgcttt tctaaattct tcggtaaaat gacctgtacg
     8341 gttggtactt ttccataata ggtacgctaa ttgaatcgga tagcaaagtg aatcaatttc
     8401 atattttcgt tcccaaacca ggtcggtcat tgctgttttg tcgttttgaa atcccgcacc
     8461 attcgctgat ttattaaaag cattcgcgta tgggtcatgc aaaatacagt tagtttgtaa
     8521 ctttacgagg ttttcaataa cagtcgccat ttcttcgtct tcttccgcca caattaaata
     8581 tggtctaatt tggcttgtag aatcgcgtaa ccacatcgct ggaatgtctc ctgtaataac
     8641 aaatggaagc ccctcttctg tttcttgtaa ggtagttgta tacgtattcg taaaacattt
     8701 ttcaaacatg cggtgaagtt tttcgttttc tggaaaagtc attttcactt tctctatcca
     8761 tttgttaaaa cttgctggta ctttgtttgt catctattac actcctttta aagtgatgat
     8821 ttcgtttgga ctagcggtaa attgtttctt ggcatctccc gtcgtttctt ccaaaatagt
     8881 cgatttctgc cacggttgca tcgtctgtag ctgttttggt tcacttgcgg tttggaagaa
     8941 tcggataatc ggttggttgt ctttagcgag tttaaatgct gagaagacaa atccagcctc
     9001 tgttttccat tctgcaaaat ctcttttttc tgcgagaatg ttttctttcg ttgctgattt
     9061 gtgttggaat gcaaaaatag gagtcaagca tgcgtttact tgtgctggga tggtgctatt
     9121 tgcaacatca gaatcatctg ttaggaaaac gtgaaactct gctgtaatct ctcggtggca
     9181 ttccgcttca tatgccggga agtcacccca atcgcctatt tcagatactg cgcgaagcaa
     9241 cgttaattct agtttgtcac catgttcgct tacttcatat tctggtaaac caacacttgc
     9301 gacaacgata tttccactag caacaaagcc ttgttttcgg ttatctttag caggatttgt
     9361 ccattctttg acttgtttat tcgcgcgtgt tactacttca aaaacacttc ccacttgatg
     9421 tgtttctgtt tgttttccag tcgggaaaag cacgcggagt cgatggtcat ctacgttgtt
     9481 atttagtttc acgcggatag ttaattgttt atcgtgttta tttagcgtta attctgtcgt
     9541 gattttaaat gtagtaaaat tttccgagcg ctccgactgc cggtcaggat gccatactag
     9601 gcgacgtttt tcttccgcaa aggcggaact tgcgctttct ggtatttcaa tttcatggtt
     9661 tatttcgatt gttttgccga gtttatcctc tcgtagtact cgaattgccg gtttggaatg
     9721 gagtgtattt attcgcaagt tatcgccggt ttctttaaac atatattcat taccgatgtc
     9781 gcccgcatcc tcatatgccc caacacctgc aatttctatc gctttttctt tatctaaaat
     9841 cgtatacgtc ccattcgccg caacttccac ttttaaaaag cgattttcta aaaacaaatc
     9901 ttgtgtttgg ttcgctgatt cattcaccaa atcaaccgga tgcgcgtaaa ttgtttcata
     9961 accaaccgct ggcaaatttt ccacggcaaa ggttagtttg tactttctcg caaaataaga
    10021 atcacggaat ttccgttctg gtaaatcgta attaaatcga atgccaagcg actcaacaac
    10081 aaccggaatt tcctcgccag tacttgtttc taatcgaaaa ctttgctctg gaagtttcgc
    10141 taattcgtct ggtattaatt caaaatgcat ctcagaaaaa tgaattgcat ctgtttcaag
    10201 ttcgagttct atggatctcg ttgcttcaag gccacctgca tgaaataccg taataggaat
    10261 gcccgcttca ttcgttgtaa tttgttccgt gatttgacgc gcggcgtttt gaataattgc
    10321 catagtcgcc tgttcgactt tttcaaaacg agcttccatt tcacggtgca cctcatccaa
    10381 actacatccc gtgatactat catggatttg attttccata agtaatttcc aagcataagc
    10441 taagtattca tgtggatact ggacaccggc ttctgtcgcc atcacggaaa tcggttcagc
    10501 caaacgctct aataaacgct ctattttcgc atttgcttgt tttaagtaaa tacgtgaaga
    10561 tgctgtgttg gcgagtgtag accatccatc tgattgttgg ctcgttaatt ctccgtgaac
    10621 cgtttgtaat ttttcaggag caagaccagc tttgacagcc tcttgatatt tttcaaaatg
    10681 gctatggata aactccacct caggataaag ttcccgtgcc acttccaatg cttccgctaa
    10741 atcagtttgc actggctgat gatcacagcc gttcataaat aaccattcat ccgtcgatgc
    10801 gaaccgttcc acatccgcta atttcttatc ccagaaaact tttgcggctt ctttatccac
    10861 cggaatttca ttgccattgg aataccaatt tgcgagtaaa atccctaata ctttcgaccc
    10921 gtccgggctt tcccaaaaca tctccgaata tttcgaggca aaagcgctat caaaaacttg
    10981 gttgttaaag ccggttggat tgactccacg accgaaaacg accgtatcaa aaccagcttg
    11041 gcgcatgagt tgtggcactt ggccatataa accaaacgta tcaggaaaat aaccaatttt
    11101 ctctacttga ccgaattctt ctgccatttc tagaccatac tgcaaattac gaatattcgc
    11161 ttctccactt gtcaaaaaag catcttgcaa catgtaccac ggtccgattc gcagttttcc
    11221 gtccgcaacc agctgcttca ttttttctct tttagcgggt ttcacagcca aataatcttc
    11281 taacataatc atttgcccat ccatatgaaa atgatgaaat ccatcttcct tatcaagtaa
    11341 tgcttctact tcgtccataa gtgtaacgag cctaaatctc aaactttcca gtggtaaaaa
    11401 ccattctcta tcccaatgag aatgagaaat aatatgcgct ttctttctag tcattttgcc
    11461 cctccaaata tcctttttgt attcgctttc aagctaagta tagtaagggc taaagtgaat
    11521 tgcaatgcta ggtgaaaaac tactatgaat aatccatttt cccttgattt gtccattaca
    11581 agaaagcgta atccttccca ctctaagaga atctcccagc atacccaaaa aaagccaaat
    11641 tgacatcttt tgccgctatg atatattgaa accgttctag acaaaataga aaggatatga
    11701 gtatacatat gtttttcact aaagataaac tacgaggccg tctggatgaa gtcgcgcttt
    11761 atcgttacga aaaaacttat cctatccgta atttccaagc agccgaggat atggatggag
    11821 aaatcgctgc acgaccaaat aacgtcttgt atgataacga attgactatc ggggaaaact
    11881 ggtcaggtag ggaccgttat gtctggctca aaacaaccat tacttttcca gacaccaaaa
    11941 ctgacacgcg cttgattggc tactttgact ttgggaatac cggcgacggc cacaattccg
    12001 gctttgaatc actattattt gttaatgggg aaccatatca aggcgtcgat caaaatcacc
    12061 gcgaagttct tttcccagat agttttgctg gaaaaaaggt ggaactggtc ttccgtttat
    12121 ggtccggact ggaaggcggc ggcactccta ctatccagac acaccagtta aaagaagcct
    12181 ttattggata cttaaatctc gtcattgatg atttgtattt cacgagtaaa gcaactttaa
    12241 aaacactcga ccaactcgaa gaaaaaaatc caacccatgc gccgctcctc caagcgatta
    12301 atcgcgctta ccttgcaatt gattggagta caccaggatc cgaacaaaac cttgcctcga
    12361 tggcaacagc caaccaaatc ttacaagccg cactggaaaa aatgccgaaa aattttccta
    12421 tcaaagtggc ggctgttggg catacacata tagatgtagc atggctatgg cgcttaaagc
    12481 atactcgcga aaaagccgca cgatcatttt cgactgtgct tcatttaatg gaagactatc
    12541 ctgaatactt atttctccaa tcgcaaccgc aactttacgc ctatatcaaa gaagattacc
    12601 cagaaattta tgcgaaaatc aaaacgaaaa ttagcgaagg aaactgggaa gctgacggtg
    12661 gaatgtggct tgaagcagat tgtaatattc ctagcggtga atccctcgta cggcaaatgc
    12721 tctacggtca gaaattttta cgcgaagaat ttggtaaacc ttctagtttt ctatggttgc
    12781 cggatgtatt tggctatagc tgggctttac cacaaatcct tcgtaaatca ggcataaaga
    12841 cttttatgac aaccaaaata agctggaatc aatataatcg tatgcctcat gatacgttcc
    12901 agtggcgcgg aattgatggt acagaaattt tgacccattt catcactgca ccagaaaaaa
    12961 atagccgcat ttcaacctat aatggcaaaa tgacagcacg agaacttgtt ggtctttggg
    13021 acaaatatca agataaagag gtaaaccaag aattactact tgcttacggc tacggagatg
    13081 gtggtggcgg tgtgaaccga gaaatgctag agatgcgccg tcgttatgat acgatgccag
    13141 gaattcctga agtaaaacca aaaagtgcta cttcttattt caacgattta cacgaaacga
    13201 taaatacgac agaccaatat gttcatactt ggaacggcga actttacttc gaatatcacc
    13261 gcggaactta tacgagccaa gcctttacga aaaaaatgaa tcgaaaaatc gaactcggct
    13321 tacgaaatag cgaatggctt tccgttttag caaatctaaa acaaggaacg tcttacccaa
    13381 ctgaaaaatt agcaggcatt tggcaaattt tacttcgaaa tcagtttcat gatattattc
    13441 ccggctcttc catcaaagaa gtttatgacg acgctctaat tgagtacacg gaagctatga
    13501 cggaaaataa tacgttaatt tctaatcaat tgaccaattt aactacagat gccgatgaaa
    13561 aaataacact ttggaatagt tccacttggt ccagaccgcg atacatcgaa atttcacccg
    13621 acaatcaatc gaaccattta gccttttatg atgaaaataa tgctccactg cctgcgcaaa
    13681 aattggtaaa taatgcctgg cttatccagc atccaaacat acctgcgctt ggtgctacaa
    13741 ctatttctgt taaagaaaca gcaaacattt tagaacaacc atcttttcac tacaaaaata
    13801 accaattgga aacacccttc tatcaaatca aatggaataa agccggacaa ttcacgtcca
    13861 tttttgacaa aaaaaataac cgccaagtaa tagcggaaaa tgcgcgaggt aatgtatttc
    13921 aattatttga agataagccg atgtggcatg acgcctggga tatcgaccta ttctatcaat
    13981 aaaaacaaaa agaaatcagc gcgctagatt cagttgaaat aaccgagaac gggccactcc
    14041 aattcactat gaagcaagtg ctacattccg aaaaatctca aatcactcag tggattcatt
    14101 tttatcacga gagccctgaa atcagatttg aaaccgaggt cgactggcga gatcgtaacc
    14161 agttgcttaa agtcgccttc cctgtcgctg tgcatgccag tgaagctagc tatgacatcc
    14221 aattcgggaa cgtcaaacgc ccaacgcact ggaatacaag ttgggattat gctcgctttg
    14281 aaaccgttgg acatcaatgg gctgatcttt cggagaaaaa ttacggcgtc agtttgttaa
    14341 atgattccaa atacggctat gatattaaag attcaactat ccgccttaca cttctgaaag
    14401 cagccggtta tccagatcca gatgccgatt taggaatcca ccaattcact tattcgctct
    14461 atccacatca aggtgatttt ttagacgggg aaacagttca agcagcatgg gaattgaata
    14521 atccaatttt cacttccaag ggggaaattg aaactttttc tcttttccaa gtgaccaatc
    14581 cttacgtgat gattgatagc attaaacaag ccgaggacgg tgatggtatc attttacgat
    14641 tgcatgaatt tgcgggaact cacggcgaag taacaatcac aagtggttac ccgattacct
    14701 caatcacaga atgcaactta cttgaggaaa acgaaacatc gctttccaat ccgacctttg
    14761 cagtagctcc atttgaaata aaaacatacc gaattcattt agcataaaaa aacacgcagc
    14821 aaggcttctc cctaagaagt ccgctgcgtg tttttattag tttaacgtga acagattaaa
    14881 gtttagtaac tttttctgct tgtgggccac gttggccttc aacgatttca aattcaacgc
    14941 tttgaccttc gtctaaagtt ttgaatcctt caccttcgat agcgctgaag tgtacgaata
    15001 catcatctcc gccttctact tcgatgaaac cgaagccttt ttcactgtta aaccatttaa
    15061 ctgtacctgt ttgcatattt cacaaacctc caaaaatttt cttaatatgt ttcttttact
    15121 aacgaaaaag atgttaacaa caagctaatc attttttcaa ttacaaaatt cacatattag
    15181 caaagatact cactccacat caatatcctt gataataagc aaattagcta ctatcaacac
    15241 ttatatatta acgccaacga gcaaataaat caagtgaaaa agccgtacgg ttacaaaata
    15301 gagtattcag tttactatct gaaaaaccct gctataagct aatt
//
LOCUS       DASDYO010000074        15324 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.074, whole genome shotgun sequence.
ACCESSION   DASDYO010000074 DASDYO010000000
VERSION     DASDYO010000074.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 15324)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 15324)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..15324
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.074"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            9..242
                     /gene="secG"
                     /locus_tag="U0290_001877"
     CDS             9..242
                     /gene="secG"
                     /locus_tag="U0290_001877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465974.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="preprotein translocase subunit SecG"
                     /protein_id="HEM2301917.1"
                     /translation="MSTVLTVLLIIVSVLLITVIILQPGKSAGLSGAISGGAEQLFGK
                     QKARGLELILHRTTIVLSVVFFAILIALAYFVQ"
     gene            498..1244
                     /locus_tag="U0290_001878"
     CDS             498..1244
                     /locus_tag="U0290_001878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465973.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HEM2301918.1"
                     /translation="MKITPPQPFLFEKGKRAVLLLHGFTGSSADVRILGRFLQENNYT
                     CYAPQYRGHGVSPDLLLKTGPNDWWEDVLEAYDHLKSLGYTEIAVAGLSLGGLFSLKL
                     GFSRPLKGIIAMSTPTRMDSSSPIIQGFLDYVRNYKKLEGKTPEQIDAEMVAYKDAPM
                     NTIAKLKDEINGVVAEIDMIYAPIMVVQGEKDDMVDVSGAQLIYDTVESTKKELHWFK
                     ESGHVITLDKERKEVNQAILTFLDSLDWQE"
     gene            1278..3659
                     /gene="rnr"
                     /locus_tag="U0290_001879"
     CDS             1278..3659
                     /gene="rnr"
                     /locus_tag="U0290_001879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease R"
                     /protein_id="HEM2301919.1"
                     /translation="MEQKQMEEKIMNLLTSAPDKTFALEDLEIEIALNNADDFKLMVK
                     ALVKLEDSGTIVRSRKNRYALPEKMDLVKGTFRAHERGFGFVLPEEKEMDDIFIPPNE
                     VKDAMNGDLVFATITKRKGDNLAEGTIKKIVERKTTQIVGTYMEDLAGTPIVMPDDKR
                     LFGEVEIDLEDGLKPVDGHKVIVELTEYATGHARARGVVKSIIGHRNDPGVDILSIIH
                     KHGISIGFPEEVMEQVSKAPDVVDDSDIGNRRDLRDQMIITIDGADAKDLDDAVTVKQ
                     LPNGNWKLGVHIADVTHYVTEGSPLDVEAQERGTSVYLVDRVIPMLPHKLSNGICSLN
                     PQVDRFTMSCEMEIDEEGHVVNHEIFESIIKTTERMTYTDVNDILVEKDEALREKYAP
                     IVPMLEKMQDLAEILRRKREKRGAIDFDFKEARVVVDEDGHPEAVVMRERSAGEHLIE
                     EFMLAANETVAEHFHWMDVPFIYRIHEDPKEDKLARFFEFITNFGLIVKGTANDIHPA
                     ALQQVLEEVKGKPEEMVVSTVMLRSMQQAKYDTVSAGHFGLSTDFYTHFTSPIRRYPD
                     LIVHRLIREYLINGDVRPETLEKRAEELPEIAEHSSKMERRAVEAERETDELKKTEFM
                     VDKVGERFIGIISSVTNFGLFIELPTTIEGLVHVSAMKGDYFKFHQNQLAMIGERTGQ
                     IYRIGDEVEVEVTKVDVDAREIDFALRSEGKPGPVSDKQKRQREKPIDKTRNFKSNQK
                     KGRNKRRAGKSEDVKPKSERKEDEWHTKPKKKKKKKPFYQGVAKESPKKKKRR"
     gene            3675..4139
                     /gene="smpB"
                     /locus_tag="U0290_001880"
     CDS             3675..4139
                     /gene="smpB"
                     /locus_tag="U0290_001880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SsrA-binding protein SmpB"
                     /protein_id="HEM2301920.1"
                     /translation="MPKGDGKLVAQNKKARHDYAIEETFEAGIVLQGTEIKSVRNARV
                     NLKDSYARIDKGEIFLHNMHISPYEQGNRYNHDPLRTRKLLLHKKQISRLIGETKESG
                     YSIVPLKMYIKDGYAKVLIGVARGKKKYDKRQDLKQKEAKRDIERAFKERQQ"
     gene            complement(4195..5103)
                     /locus_tag="U0290_001881"
     CDS             complement(4195..5103)
                     /locus_tag="U0290_001881"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2301921.1"
                     /translation="MQNIGDTLKFIRKSKNLTQQETCTNALSRSNYQKIENNKIMPSM
                     DRFIQILLNFNMTLEEFEFVKRDFTPSPKENILYLYSKIITSSETDMILNVISKCDDY
                     LENHTDIFISDIKASLEGILLAEKEHNFELAREKVTYIWDRLSEADELFWNDILILRN
                     IFFIFENETAQHIVNRLISQLKKYRYLYPTLSIEISLHVNRATYLILDEEYELALHYI
                     ELSIKIAKHNHYYLQFCMAIAKKGIVLYKLGQKQKGKHFMQRALRVAKVLEEERILNG
                     IKNEIDYFLHDELQNLSLNEFTKIDI"
     gene            5486..8761
                     /locus_tag="U0290_001882"
     CDS             5486..8761
                     /locus_tag="U0290_001882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate-binding protein"
                     /protein_id="HEM2301922.1"
                     /translation="MKRKGKKSSLIFILTILIFSCLSGFGTNVFAMDGEYHSPYGDDD
                     LYTVQPTERSPRDPKAGEDVTLNITTWPIEDGQNVWVEWTKNGVAQENVTAAYDYNSG
                     NNTYWKADLGKFEKGDEITYTTKGSTDGGTAYESGPFTFYVTDWEYVQDVSSVVDNGD
                     SITLNMTATAGEFTPKLYLSFEDLDTLRMELSPTGKETGHAGKTGYTVDDGADKVTVT
                     TEDLRVEIQKSPYRMEVYQADGTLLTSEYTTANSLGWLTDGKNVINQYQNNFMTPSDE
                     AFYGFGERYDTINQRGKDVETYVYNEYQDQAQTERTYLAVPFFVSANKYGMYVNSDFH
                     SQFQMASKVEDKYSFVLDNDGDMTNMLDYYVISGKDQNDIVNNYTDITGKTTLLPKWA
                     FGLWMSANEWDRESDVSSALSNAKANDIPATGFVLEQWSDEETYYIWNNATYTAKKNG
                     EAFSYDDFTFNGKWTDPKAMVDSVHDAGMNIVLWQVPVLKDDGTVYEQRDNDEAYMIS
                     QGYSADDGTGAPYRVPASQWFGNGILLDFTNKDAVDWWTSQREYLLTEVGIDGFKTDG
                     GEMVWGRDTTFSNGEKGQEMRNRYPTDYVSSYFDFAKSINPEAVSFSRSGTSGAQKSG
                     IYWSGDQTSTFDSFQASLKAGLSASTSGVSYWAWDMAGFTGDYPTAELYKRATAMAAF
                     APIMQFHSEKSDPSPSEERSPWNAVARTGDETILPTFQKYLYTRMNLLPYIYTAAKDT
                     ADNGKSMMRQMAMDYPEDINARDLDEQYMFGDDLLVAPIVQEGQTEKEVYLPEGEWVD
                     LWNGGIHPGGETISYYADVDTLPVFAKAGAIIPMNMTDGYQLGQNVGNDLKSYDNLTF
                     RVYPSGDSEYSFYDDVNGGEMRDISVSEDFANEKVSVDLPAMADETTMQVFSTEPTSV
                     TIDGADVAKADTLDAFNEATTGYYYDTVQNLTYVKAAAKDAKQAIVLNGVNHAPYEAE
                     FAHLTNVSTASDHAGYTGTGFVAGFDAEKEAVEFDVDAVDGASDYTMEVRYSAGVEDA
                     TRTVYINGKKQQITLPKTADWDTWSTIEVPVTLQAGNNQVVFDFEADDTAGINFDHVV
                     FKK"
     gene            8822..9766
                     /locus_tag="U0290_001883"
     CDS             8822..9766
                     /locus_tag="U0290_001883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003732478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo2445 family class 3 internalin"
                     /protein_id="HEM2301923.1"
                     /translation="MKKIIGLAFIAFCCILFAPTIKAQADTVPLPAPIIEAFPVEAIA
                     EAIAGELDKDSVNDTITQADLDTMTLIPLPSLGLTGEDLSVLNNEVFTNAIELAIWSN
                     NIGELPDLSDALPALENIEANGANITLFPDANYPNLTNVDLSQNNFGFNIPKFVGMEG
                     LVSINMEDAGLSGYVAEDIWMNMPNLDSLLLNENHLISIPEDIFLSEQLSTHSFANQT
                     ATYPHTTIKQGENLEVFVPFIYQALDFIAPSRHDLIIIKDNGRTLYEPPYPTYDGSYM
                     YKIETAGLQPGEHLLEISLGYNSGEYTGWYDFPVTITE"
     gene            9781..13713
                     /locus_tag="U0290_001884"
     CDS             9781..13713
                     /locus_tag="U0290_001884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF5110 domain-containing protein"
                     /protein_id="HEM2301924.1"
                     /translation="MKKGMKQVCVSMAVVPLVWLNLGITQPLQVEVKAEETKEKEVKK
                     EANTGAAKQLSKEEYAKLSAEEGLGNVLEATVTDNVITLKIDNGDEAEDDYLEISPLA
                     NNLLKVNLRPRNIENSPSTPMIDPNATFTAIGATIDLESDPMIISTDECTLEIAKEPA
                     RMTFKDKNGKTLLSESADGGIFDGGVRFKRGASDHVYGAYGISFSDGDLGMERDNTAA
                     DSNKTAQAGQQGNAGGPFMWSTAGYGLLVDSDGGYPYSVSDEEKLEFYYGDTVVEGRR
                     YVKENVEMYLMSGEPEEIMSSYADVTGHTPMMPKWSLGFSNFEWGTNETEFRENINTY
                     RAKGIPIDSFAFDYDWKFYGDPTYGGDYGEFAWNTENFPSAKDTTLKSDMDALGVKMI
                     GITKPRVVTNLEDGTATQQGKDAEANGYWYPGQSAYEDYAFPVTVRSIDPYNEDERNW
                     WWSHSEDALDKGIVGWWNDETDKVSSNGADYWFGNFTTGFTSEAMYEGQRDYTNERVW
                     QTGRTFYPGAQRYSTSTWSGDIGVQWKKGEVIDWANGMQEQPSTMLSTINLGQTKWGM
                     DTGGFNANSGQVLNPDPELYSRWMEFSSLVPVFRTHGNQNQQRQPWFYGGTAEEVAKS
                     SMTWRYSMIPYMYAYERQAYDSGVGLVQPLTFDNPTDENVVNLTDEWMFGDGLLVAPV
                     LEEGAGSRDIYLPAGTWIDYNRGDVYEGNQTISYEVNDDDWTDVPMFVKQGAIMPMQQ
                     PQNYVGESAVKTIYLDTFASDKETSFTHYDDDGKSFDYEKDTYLKQKMTTSKTADTST
                     FTIGAKEGSYKADTENYIVKLHGNAAESVQVNGADSKVYDDLSALETADGSGYAVGSD
                     VYGAVTYVKVPAQADADTVITTSGSASVVQTGTYEMETGSNFADTVADKPVAEKTYVD
                     GYDKDGAGTTIYANVKDSGDYNVDLTYKNASADNQSLSIFVNGDYVKQTTLKPNTDWS
                     VQSEALPLSAGKNSISYKVVTDTGDKADQVSLDKVNIGFTPTVAKVEAEEADLAGTLK
                     VANDHWFYSGEGFVGGFGAAGDEIKFEVDVPADGEYVLNTRTANGTGMPQTLDLYTNG
                     DYNSRVTFPSEGENWNIWSDTEKAVNLKAGTNKITFLRDGETTGNVNIDRILVSAEPI
                     NSPVQSEVNLLDNGGFERDAAATTNWVESHPDGQDKAYGVDSGSGVNPPESPAFGKQS
                     AYFYLPGAYKQTLAQQIAVPVNNANYDVEAWVKVSNDDAAKAQMTVNNYDSSDGKTID
                     LVADDVWHYVTMKDVKVTTGNINTSFQMDSPGGTSIHIDNVRVMPSAE"
     gene            13764..14729
                     /locus_tag="U0290_001885"
     CDS             13764..14729
                     /locus_tag="U0290_001885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301925.1"
                     /translation="MKNLFRLFLVFSIVIIGVVSFQAIDASANETDVITQDDVDAVTS
                     LGLGYFTNYLTDEDLQMLGNAYFTNVNNIMIYPTQTMFTGFPDLPTLPKLDTLRAEGN
                     LSSEVLPENITVPDYQNYPELKYLDLSNRTIVGGLPNFSNIPKLETLLMSSCGLASED
                     VPDFTNLKNLQKVNFQTNQYRTEMTDFTYLDSLVSMDLSYNYLNVLPPTIVDKVIVLG
                     QIGTLPDQNVVFGEDTNITLPVYTQLDDLGRISGFQEVWIRDSNEKEIYNVAKVDYDE
                     VTKQIIVPTNNLDKGEYTIGIDFNGIEPYIEEGEVMNYSVKITIN"
     gene            14845..15214
                     /gene="ssrA"
                     /locus_tag="U0290_001886"
     tmRNA           14845..15214
                     /gene="ssrA"
                     /locus_tag="U0290_001886"
                     /product="transfer-messenger RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00023"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00023"
BASE COUNT         5144 a         2549 c         3394 g         4237 t
ORIGIN      
        1 aaagaacaat gagtacagtt ttaacggtct tactcatcat cgtatcagta ctgttaatta
       61 cagttatcat acttcaacca ggtaaaagtg ctggcttatc cggtgccatc tctggtggag
      121 ctgagcaatt attcggtaag caaaaagcaa gaggactaga acttattcta catcgtacaa
      181 ccatcgttct atccgttgtt ttcttcgcaa tactaattgc actggcatat tttgtacagt
      241 aacgagatgt taaccacctg aatgaaaatt taggtggttt tttattggag ttctaaagaa
      301 gcgtattccg cttccctaga actccaatac aaggcgtaac gaagtggagc gttgtttcca
      361 taaaaaaaag tggacgaaca actcaaaaag gggagcacaa attattaaat acagccaatc
      421 ccctagaact ccaacaaaaa taacatccaa cccagatcaa ccaaacctcc aaaaagaacc
      481 aaggagcgat atttactatg aaaataacac caccacaacc attcctattc gaaaaaggca
      541 aaagagcagt gttactcttg cacggtttca caggtagctc agcggatgta agaatattag
      601 gtaggttttt acaagaaaac aattatactt gctatgcacc tcaatacaga ggccacggtg
      661 tatctcctga cctactgtta aaaacgggac caaacgattg gtgggaagat gttcttgaag
      721 cctatgatca cctaaaatca cttggttaca cggaaatagc tgtggcggga ctttcactcg
      781 gtgggctttt ttcactaaaa ttaggttttt ctaggccgtt aaagggaatt atagccatga
      841 gtactccaac aagaatggac agttcatcac caataattca aggcttttta gattatgtgc
      901 gtaattataa aaaattagaa ggtaaaacac ctgaacaaat cgatgctgaa atggttgcct
      961 ataaagacgc cccaatgaac acaatcgcta aactaaagga cgagataaat ggcgtcgtgg
     1021 ctgaaataga tatgatttat gcgccaataa tggtcgtcca aggtgaaaaa gacgatatgg
     1081 ttgatgtgag cggagcacag ctaatttatg atacagtaga gtcaacgaag aaagaattgc
     1141 actggtttaa agaatctggg cacgtcatca cattagacaa agaacgaaaa gaagtaaatc
     1201 aagccatttt aacattttta gatagtttag attggcaaga atagacaatt tttaaaacag
     1261 agagaggagg gacagaagtg gaacaaaaac aaatggaaga aaaaattatg aatctattaa
     1321 cttcagcgcc tgataaaaca tttgcgcttg aagatttgga aatagaaata gctttaaaca
     1381 atgcggatga ctttaaatta atggtgaaag ctttagtgaa actggaagat tccggaacta
     1441 ttgtccgctc aaggaagaat cggtatgcat taccagaaaa aatggactta gtaaaaggaa
     1501 catttcgtgc acatgaacga ggttttggct ttgttctccc agaagagaaa gaaatggacg
     1561 atatttttat cccgccaaat gaagttaaag atgcaatgaa cggtgattta gtttttgcaa
     1621 caatcacgaa acgtaaaggc gataatttgg cagaaggtac gattaagaaa attgtcgaac
     1681 ggaagacaac acaaatcgtc ggaacttata tggaagactt agctggtact ccaattgtga
     1741 tgccagatga caagcgactt tttggtgaag tggaaattga tttagaagac ggcttaaaac
     1801 cagttgatgg gcataaagtt attgttgaat tgacggaata tgcaactggg catgcgcgtg
     1861 caagaggggt tgttaaatca atcatcggtc accgtaatga tccaggagtg gatattttat
     1921 cgattattca taaacacggt atttcaatcg ggttcccgga agaagtaatg gagcaggtaa
     1981 gtaaagcgcc ggatgtggtg gatgattcgg atattggtaa ccgtcgtgat cttcgtgacc
     2041 aaatgattat tacaattgac ggggcagacg ctaaggattt agatgatgct gttactgtta
     2101 agcaactacc gaatggcaac tggaagctag gcgttcatat tgcggatgta acgcattatg
     2161 tgacagaagg ctcgccgctt gatgtcgaag cgcaagaacg tggaacgagt gtttatttgg
     2221 ttgaccgcgt aattccgatg ttgccacata aactatcgaa cggaatttgc tcgcttaacc
     2281 cacaagtaga tcgttttact atgagttgtg aaatggaaat cgatgaagaa ggtcatgtgg
     2341 ttaatcacga aatttttgaa agtattatta aaacaacaga acgtatgacg tatacggatg
     2401 taaatgatat tttagttgaa aaggacgaag ctttacggga aaaatatgcg ccaattgttc
     2461 caatgcttga aaagatgcaa gatttggccg aaatacttcg tcgtaaacgt gaaaaacgtg
     2521 gcgcgattga ttttgacttt aaagaagcac gtgtagttgt tgatgaagac ggtcatccag
     2581 aagcagtcgt tatgcgcgaa cgttcagcgg gagagcattt gattgaagaa tttatgcttg
     2641 ctgccaatga aacagttgca gagcatttcc actggatgga tgtaccattt atttaccgta
     2701 tccatgaaga tccaaaagaa gataaattag cgcggttctt tgaatttatt acgaactttg
     2761 gtttgattgt gaaggggact gctaacgata ttcacccagc tgctttacaa caagtactag
     2821 aagaagtaaa aggtaaaccg gaagagatgg ttgtttcgac tgttatgctg cgttcgatgc
     2881 aacaagcgaa gtatgacaca gtaagcgccg gacactttgg tttgtctact gatttttata
     2941 cacatttcac gtcaccaatt cgtcggtacc cggatttgat tgttcacagg ttgattagag
     3001 agtatttaat taacggggat gttcgtccgg aaacgttaga aaaacgcgct gaggagcttc
     3061 ctgagattgc tgaacacagc tcgaaaatgg agcgccgtgc cgttgaagca gagcgcgaaa
     3121 cagacgaact gaagaaaacg gaatttatgg tcgacaaagt gggcgaacgt ttcatcggaa
     3181 tcattagttc ggtaaccaat tttggcttat ttatcgaact tccaactacg attgaaggtt
     3241 tagttcatgt gagcgcaatg aaaggcgact acttcaaatt ccaccaaaat caattagcga
     3301 tgattggcga aaggacaggc caaatttatc gtattggtga tgaagtggaa gtcgaagtaa
     3361 ctaaagtaga cgtggatgct cgtgaaatcg attttgcgct tcgtagtgaa ggtaaaccag
     3421 gtccagtgag cgataaacaa aaacgccaac gcgaaaaacc gattgataaa acaagaaatt
     3481 tcaagagtaa ccagaaaaaa ggtcgtaaca aacgtagagc tggtaaatca gaagacgtga
     3541 aaccaaaatc agaacgtaaa gaagacgaat ggcatacaaa acctaaaaag aaaaagaaga
     3601 aaaaaccttt ttatcaaggt gtagcaaaag aaagcccgaa gaagaaaaaa cgtcgctaga
     3661 aaggatgggg agttatgcca aaaggtgatg gtaagctagt tgcgcaaaat aaaaaagcgc
     3721 gccacgatta cgcaattgaa gaaacttttg aggctggcat tgtcctgcaa ggtactgaaa
     3781 ttaaatccgt aagaaacgca cgggtaaact taaaagattc ctatgcacgt atcgacaaag
     3841 gggaaatttt cttacacaat atgcatatta gtccttatga acaagggaac cgctacaatc
     3901 atgatccact aagaacgcgc aaattgcttt tacataagaa gcaaatcagc cgtttaattg
     3961 gagaaacgaa agagtccggt tattcgattg ttccgctaaa aatgtatatt aaagatggct
     4021 acgcaaaagt actcatcggt gtagctcgag gtaaaaagaa atacgataaa cgccaagact
     4081 taaaacaaaa agaagcaaaa cgtgatatcg aacgcgcttt taaagagcgc caacaataaa
     4141 agcctaaatc tagtcattca accaaaagtt ggagaagcta gatttaggct ttttttatat
     4201 gtcgattttg gtgaattcgt ttaaagagag attttgaagt tcatcgtgaa gaaaataatc
     4261 tatttcattt ttgataccat ttagaatacg ctcttcttca agcactttag ccactctaag
     4321 tgctcgttgc ataaagtgtt tacctttttg tttttggccg agcttataca gcacaattcc
     4381 ttttttcgca atagccatac agaattgtaa gtagtaatgg ttatgcttag cgatttttat
     4441 agataattca atgtagtgca aagctagttc atattcttcg tctaaaatta aataagtagc
     4501 acgattaaca tgaagtgaaa tctcaatcga aagggttgga tataggtaac gatatttttt
     4561 aagttgagag ataaggcgat ttacaatatg ttgagcggtt tcattttcaa aaataaagaa
     4621 aatatttctt aaaattaata tgtcattcca aaataattca tccgcttccg aaagtctgtc
     4681 ccaaatgtag gttacttttt ctcgagcaag ttcaaaatta tgttcttttt cagcaagtaa
     4741 aataccttca agtgaggctt taatatcaga aataaaaata tcggtgtggt tttctaagta
     4801 atcatcgcat ttggaaataa cattaagtat catatctgtt tcggaggagg taataatctt
     4861 ggagtataga taaaggatat tttcttttgg agaaggtgta aagtcccgtt ttacaaattc
     4921 aaattcttct aacgtcatat tgaaattaag taagatttgg ataaaacgat ccatactagg
     4981 catgatttta ttattttcga ttttttgata gttagaacga ctgagggcat tcgtacaagt
     5041 ctcttgttgt gttaagtttt tacttttccg aataaatttt aatgtgtctc caatattttg
     5101 cataaaactc agctccattt gttcaaattt gatgcttttt aattttatgt aagatttgtg
     5161 agttagtatt tctgtataga tgaaaaagga gggagaagac atgttaactt tgttaaaaag
     5221 tattaactgg ttgttttaaa gttttttaag caaggtcttc tgatgaacgc aattattgtt
     5281 tttccatgaa gaatggtctg gcatagttgc gtttttttgt agaattatta gtaatttgaa
     5341 cttttttagt atatctgtga aagcattata acattatgtg attatttcta caatcgccga
     5401 tatgcaaaaa ttaataattt tgcgaaataa cacatcaaaa gtagtatgtt tttagtaaaa
     5461 atatacatta agggaggaaa gagagatgaa gcgaaaggga aagaaatcta gtttaatttt
     5521 cattttgacc atactaatat ttagttgttt aagtggattt gggacaaacg ttttcgcgat
     5581 ggatggtgaa tatcactcac catatggaga tgatgattta tatactgtcc aaccaacaga
     5641 acgttctcct agagatccca aagctggtga agatgtgaca ttaaatatta ctacctggcc
     5701 aattgaagat ggacaaaatg tttgggtaga atggactaaa aacggggtag cacaagagaa
     5761 tgttacagca gcttatgatt ataatagcgg gaacaatact tactggaaag cagatttagg
     5821 aaaatttgaa aaaggcgatg aaatcactta tacaacaaaa ggctctactg acggaggaac
     5881 tgcttatgaa agtggtccgt ttacatttta cgtgacagac tgggagtatg tgcaagatgt
     5941 tagtagcgtt gtagataatg gggattctat tacattaaat atgacagcca ctgcaggtga
     6001 attcactcca aaattatatc tttcatttga ggatttagat acgcttcgta tggagctatc
     6061 accaaccggt aaagaaactg gacatgctgg aaaaactggt tacacagtag atgatggtgc
     6121 agataaagta acagttacaa cggaggattt acgagtagaa attcaaaaat ctccttaccg
     6181 catggaagtg taccaagcag acggaacttt acttacaagc gaatatacaa ctgccaacag
     6241 cttaggttgg ttaacagatg gaaaaaatgt catcaatcaa tatcaaaata actttatgac
     6301 accaagcgac gaagcatttt atggttttgg tgaacgttat gacacgatta accaacgagg
     6361 aaaagatgta gagacatacg tatacaatga gtatcaagat caagcgcaga cagaaagaac
     6421 ctatttagcg gtaccatttt ttgtaagtgc taataaatac gggatgtatg tcaattctga
     6481 tttccattca cagttccaaa tggcttctaa agtagaagat aaatatagct ttgtattgga
     6541 caatgatggc gatatgacga atatgcttga ttactatgtt attagcggga aagatcaaaa
     6601 tgatatcgta aataactaca cggatataac agggaaaacg actttgctac caaaatgggc
     6661 ttttggactt tggatgtcag caaacgagtg ggatagagaa tccgatgtaa gctctgcact
     6721 ttctaatgca aaagcaaatg atattccagc aacaggtttt gtattagaac aatggagtga
     6781 tgaagaaact tactatattt ggaacaatgc gacctataca gcaaagaaaa acggggaagc
     6841 atttagctat gacgatttta ctttcaacgg gaaatggact gatcctaaag ctatggtgga
     6901 tagtgtccat gatgcaggta tgaatatcgt tttatggcaa gttccagtat taaaagatga
     6961 cggtacagta tatgaacaaa gagataatga tgaagcatac atgataagcc aagggtatag
     7021 tgcggacgat ggaacagggg ctccttaccg agttccggca tctcagtggt ttggaaatgg
     7081 gatattacta gatttcacta ataaagatgc tgtagattgg tggacgtccc agcgtgagta
     7141 tttattaaca gaagtaggta ttgacggatt taagacagat ggtggagaaa tggtgtgggg
     7201 acgtgataca actttctcta acggcgaaaa aggacaagaa atgagaaacc gttatccaac
     7261 tgactacgtt tcaagttatt ttgattttgc gaaaagtatt aatccagaag cagtttcgtt
     7321 tagtcgttca ggaacttctg gagcacaaaa atctggtatt tactggtcag gagatcaaac
     7381 ttccacattt gactctttcc aagcttcatt aaaagctgga cttagtgctt caacttcagg
     7441 tgtttcttac tgggcgtggg atatggctgg atttacggga gactatccaa cagcagaact
     7501 atataaacgc gcaactgcga tggcagcttt tgcaccgatt atgcaattcc attcggaaaa
     7561 atcagatcca tcgccaagtg aagaacgttc accttggaat gcagtagcca gaacaggcga
     7621 cgaaacaatt ttaccgacat tccaaaaata tctatacaca cgaatgaatt tacttccata
     7681 tatttataca gcggcaaaag atacggcgga taatggtaaa tcgatgatgc gccaaatggc
     7741 catggattat ccggaagata tcaatgcgcg tgatctagat gaacagtata tgttcggtga
     7801 cgatttactt gtagcgccaa tcgttcaaga aggtcaaaca gaaaaagaag tttatctacc
     7861 agaaggcgaa tgggttgatc tttggaacgg cggaattcat ccaggtggcg aaaccatttc
     7921 gtattatgca gatgtagata cgcttcctgt atttgcaaaa gctggagcga ttattccgat
     7981 gaatatgaca gatggctacc aacttggcca aaatgtcgga aacgatttaa aatcctatga
     8041 taatttaaca ttccgagttt atccatctgg agatagcgaa tatagtttct atgatgatgt
     8101 aaacggcgga gaaatgcgtg acatcagtgt ttctgaagac tttgcaaatg aaaaagtttc
     8161 cgtagatctt ccagcaatgg cggatgaaac aacgatgcaa gttttcagta cagaacctac
     8221 aagtgtaacg attgacgggg cagatgtagc taaagcggat acgctagatg catttaacga
     8281 agcaacgaca ggttactact atgatacagt acaaaactta acatatgtaa aagcagcggc
     8341 aaaagatgcc aaacaagcaa tcgtattaaa cggtgtaaat catgcaccat acgaagcgga
     8401 atttgctcat ctgacaaatg taagtactgc aagtgatcac gcgggatata ctggtactgg
     8461 ttttgtagcc ggctttgatg cagaaaaaga agcggtagag tttgatgtag acgcagtgga
     8521 tggtgcttct gattatacaa tggaagttcg ttatagtgct ggcgtagaag atgcaactag
     8581 aaccgtatat atcaacggta aaaaacaaca aattacttta ccgaaaacgg ctgattggga
     8641 tacttggagc acgatagaag ttccagtaac cttgcaagct ggtaataacc aagttgtatt
     8701 tgattttgaa gcagatgata cagcgggaat aaattttgac catgtagtat ttaagaaata
     8761 aatccaataa gccacccttt tatggataga gagggtggct atgttgaaag gattgaactg
     8821 aatgaaaaaa ataattgggc tagcatttat agctttttgt tgcatattat ttgcaccaac
     8881 tataaaagca caagcggata cagttccctt accagcgcct attattgagg cttttcctgt
     8941 ggaagcgata gcggaggcga ttgcgggaga actagataaa gattctgtaa atgacacgat
     9001 tacgcaagca gatttggata caatgactct tattcctttg ccctcattgg gtttaacggg
     9061 ggaagactta agcgtactaa acaatgaagt atttacaaac gcgattgaat tagcgatttg
     9121 gagtaataat attggagaac tgcctgattt atctgatgcg cttcctgctt tagaaaatat
     9181 tgaagcaaat ggggctaata ttactctttt tccagatgca aactatccta acttaaccaa
     9241 tgttgatttg agtcaaaata attttggctt taatattcca aaatttgttg gaatggaagg
     9301 actagtaagt attaatatgg aggatgctgg actttctggt tatgtagcgg aagatatttg
     9361 gatgaatatg cctaacttag attcactact tcttaatgag aatcatttaa tttctattcc
     9421 ggaagatatc tttctatcag aacaattaag tacacattca tttgctaacc agacagcaac
     9481 ttatcctcac acaacgatta aacaaggaga gaacttggaa gtttttgttc cttttattta
     9541 ccaagcatta gattttatcg caccaagcag acacgattta attattatta aggacaatgg
     9601 gagaacgctt tatgaaccac cttatccgac ctatgatggt tcatacatgt acaagattga
     9661 aacagctggc ttacaaccgg gggagcattt gctagaaatt tcattaggtt ataactctgg
     9721 agaatatacg ggttggtatg attttccagt aactattaca gaataaaaag gggcgagatg
     9781 atgaaaaaag gtatgaaaca agtttgtgtc agtatggctg ttgtaccact agtttggctg
     9841 aatttaggga taactcagcc gttacaagtg gaagtgaaag cggaagaaac gaaagaaaaa
     9901 gaagtgaaaa aagaagcgaa tacaggagcc gcgaagcaac ttagcaaaga agaatatgcg
     9961 aaattaagtg cggaggaagg gcttggaaat gtccttgaag caacggtgac tgataatgtc
    10021 atcacgctta aaattgataa cggggatgaa gcagaagatg attacttgga aatttccccg
    10081 ctagcgaata atttgcttaa ggtgaatttg cgaccacgca atatcgaaaa cagtccatct
    10141 acacctatga ttgatccgaa tgcaactttc acagcgattg gtgcgaccat tgacttggaa
    10201 tcagatccga tgataatttc aacagatgaa tgtacgctag aaattgctaa agagccagca
    10261 cgaatgactt ttaaagataa aaatgggaaa acgttattgt ctgaatcagc ggacggcggg
    10321 atttttgatg gcggtgttag atttaagcgc ggcgcttctg accatgttta tggtgcctat
    10381 ggaattagtt ttagtgacgg agacctgggc atggaacgag ataatactgc tgccgatagt
    10441 aataagactg cacaagcggg tcagcaaggt aatgcaggcg gtccgttcat gtggtctaca
    10501 gcaggatatg gcttacttgt agatagtgat ggcgggtacc cgtattccgt ttcagatgaa
    10561 gaaaaattag agttttatta cggcgataca gtggttgaag gccgtcgcta cgtgaaagaa
    10621 aatgtagaga tgtatttaat gtctggtgag cccgaagaaa ttatgtcttc ttatgctgat
    10681 gtaacagggc atactccaat gatgccaaaa tggtcgcttg gattctctaa ctttgagtgg
    10741 ggaacaaatg aaacagaatt tagagaaaac attaatacgt atcgtgcgaa agggattccg
    10801 attgattcct tcgcgtttga ttatgattgg aaattctacg gagatcctac gtatggtggc
    10861 gattatggcg agtttgcttg gaatacagaa aacttcccat cagcaaaaga cacaacgtta
    10921 aaatccgata tggatgcact tggtgtaaaa atgattggga ttacaaaacc gcgtgtcgta
    10981 actaatttag aagatggaac agccacgcaa caagggaaag atgcagaagc aaatggttac
    11041 tggtatccag ggcaatctgc gtatgaagac tatgcattcc ctgtaacggt aagaagtatt
    11101 gacccataca acgaagatga acgtaattgg tggtggtcac attctgagga tgccctagat
    11161 aaaggaattg tcggttggtg gaatgatgaa acagacaaag tatcttctaa tggagccgat
    11221 tattggtttg gtaatttcac aactggattt acatcagaag ctatgtatga aggccaacgc
    11281 gactatacaa atgaacgtgt ttggcaaaca ggaagaacct tctacccagg cgcacagcgt
    11341 tattctactt ctacttggtc cggcgatatc ggcgttcagt ggaaaaaagg cgaagttatt
    11401 gactgggcaa atgggatgca agaacaacct agtacaatgc tttcgacaat taatttagga
    11461 cagacaaaat ggggcatgga tacaggtggt ttcaatgcca attcgggcca agtgttaaac
    11521 ccggacccag aactttatag tcgttggatg gaatttagtt ctctagttcc agttttccgt
    11581 acgcatggga atcaaaatca acaacgtcaa ccttggttct atggtggcac ggcggaagaa
    11641 gttgctaaaa gtagcatgac ttggcgctac tcaatgattc cttatatgta tgcttatgaa
    11701 cgtcaagcat atgactctgg tgttggtcta gttcaaccac ttacgtttga taatcctact
    11761 gatgaaaatg tggttaattt aacagatgag tggatgtttg gtgatggatt acttgtggca
    11821 cctgttttag aagaaggagc gggttctcgt gatatttatt taccagcagg aacatggatt
    11881 gactacaacc gtggcgacgt atacgaagga aatcaaacaa tcagttatga agtgaatgat
    11941 gacgactgga cagatgtgcc gatgtttgtt aaacaaggtg ccattatgcc aatgcaacaa
    12001 ccacaaaact atgttggcga atccgcagtc aaaacaattt atttagacac ttttgcatca
    12061 gataaagaga catcctttac acattacgat gacgacggaa aatcttttga ttatgaaaaa
    12121 gatacctatt taaaacaaaa aatgactact tcaaaaactg ctgatactag tactttcacg
    12181 attggtgcga aagaaggaag ttataaagca gacacagaga attacattgt aaaactacac
    12241 ggaaatgcgg ctgaaagcgt ccaagtaaat ggcgcagata gcaaagttta tgacgattta
    12301 tccgctttag aaactgctga tggtagcgga tatgctgtag gtagcgatgt atacggagca
    12361 gtaacatacg taaaagtacc agctcaagct gatgcagata ctgtcattac aacttcaggt
    12421 tctgcaagtg tcgtacaaac aggaacatac gaaatggaaa caggatccaa ttttgctgat
    12481 acagttgctg ataaaccggt tgctgaaaaa acgtatgtgg atggctacga taaagacggc
    12541 gccggaacta ctatctatgc aaatgtaaaa gactctggtg attataatgt ggacctaact
    12601 tacaaaaatg cttccgcaga taaccaatca ttaagtattt ttgtcaatgg tgattatgta
    12661 aaacaaacca cgctaaaacc aaacaccgat tggtcagttc agtccgaagc attaccactt
    12721 tcagcaggga aaaatagtat ttcttataaa gtggtaacgg acacaggcga taaagctgat
    12781 caagtatcac tagacaaagt aaatattggt ttcacaccaa ctgtagcaaa agtcgaagca
    12841 gaagaagcgg accttgccgg cactttaaaa gtggcgaacg atcactggtt ctatagtgga
    12901 gaaggttttg ttggtggatt tggagcagca ggagatgaaa tcaagtttga agtggatgta
    12961 ccagctgacg gcgagtacgt actaaacaca cgaacagcaa atggaactgg catgccacaa
    13021 acactcgatt tatatacgaa tggtgactac aactctcgcg taactttccc ttccgaaggt
    13081 gaaaactgga atatttggtc agatacagaa aaagctgtga acttaaaagc aggaaccaat
    13141 aaaattacct tcctaagaga cggcgaaact actggtaatg taaatatcga tagaattctt
    13201 gtttcggctg agccaatcaa ttcaccggta cagtcggaag taaatctact cgataacggc
    13261 ggatttgagc gggatgcagc ggcaacgacc aattgggtag agtctcatcc tgatgggcaa
    13321 gacaaagcat acggcgttga tagtggctca ggtgtcaatc ctccagaatc accagcattt
    13381 ggtaaacaga gcgcttattt ctatttacct ggcgcttaca aacaaacact cgctcaacaa
    13441 atcgcagttc cagttaataa tgcgaattac gacgttgaag catgggtgaa agtaagcaac
    13501 gatgatgcag caaaagcaca aatgacggtt aataattatg atagcagcga tggtaaaaca
    13561 attgacttag ttgcagatga cgtttggcat tatgtaacaa tgaaggatgt caaagtaaca
    13621 acaggcaata tcaatactag tttccaaatg gattccccag gaggaacgag cattcacatt
    13681 gataatgtaa gagttatgcc atccgcagaa taatatagaa gggcggggaa tttcctcgtc
    13741 ctttataaat tggaggagat aggatgaaaa atctatttag actattcttg gtatttagca
    13801 tagttattat cggggttgtt tcttttcaag cgatagatgc aagtgcaaat gagacagatg
    13861 taattaccca agatgatgtg gatgcggtga catctctagg gttgggttat tttaccaatt
    13921 acctcacaga tgaagattta caaatgctag gaaatgctta ttttaccaat gtaaataata
    13981 ttatgattta tcctacacaa accatgttta ctggctttcc tgatttacca accttgccca
    14041 aattagatac tttgagagca gaaggaaatc tatcaagcga ggtactacct gaaaacatta
    14101 cagttcccga ttatcaaaac tacccagaat taaagtatct tgatcttagt aatcgaacta
    14161 ttgttggggg cttacctaac ttttctaata ttcctaaatt agaaaccttg ttgatgagca
    14221 gttgtggact agcttcggaa gacgttccag attttacaaa cttgaaaaat ttgcagaaag
    14281 taaattttca aacgaaccaa tatagaacag aaatgacgga tttcacttat ttggacagtt
    14341 tggtaagtat ggatttaagt tataattatt taaatgtgtt gccgcctact attgtggata
    14401 aagtaatcgt actaggtcaa atcggaactt tgccagatca aaatgttgtt tttggtgagg
    14461 atacaaatat cacgctacca gtttatacgc aactagatga tttaggtaga attagtggtt
    14521 ttcaagaagt ttggattcgt gattcaaatg agaaggaaat ttacaacgtg gcaaaagtgg
    14581 attacgacga agtgacgaag cagattattg tgccaacaaa taaccttgat aaaggtgaat
    14641 acactattgg aattgatttt aatggaatag agccttatat agaagaaggc gaagttatga
    14701 attactcagt aaaaataacc attaattaat ggaaaacttg tgacatgcta aataatagtt
    14761 gcgcatttgg ctatgtcaca agttttttct gtttgtaaag cctcgttttt tcctgtataa
    14821 taactactgt tagactttaa ctctggggat gttacggatt cgacagggat agttcgagct
    14881 tgagttgcga gtcgggggga tcgtcctcgt tatcaacgtc aaagccaata ataactggca
    14941 aagaaaaaca aaacctagct ttcgctgcct aataagcagt agcatagctg atcctccgtg
    15001 catcgcccat gtgctacggt aagggtctca ctctaagtgg gctacactag ttaatctccg
    15061 tctggggtta aatagaagag cttaatcaga ctagctgaat ggaagcctgt taccgggccg
    15121 atgtttatgc gaaatgctaa tacggtgact acgctcgtag atatttaagt gccgatattt
    15181 ctggacgtgg gttcgactcc caccatctcc atattttatg gaaactgaga agtgatacaa
    15241 actgcttttt taagctgttt gtatcacttt tttatttgga tgctaaacga tggagtcaag
    15301 aaaataatta cgattttaga ataa
//
LOCUS       DASDYO010000075        14937 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.075, whole genome shotgun sequence.
ACCESSION   DASDYO010000075 DASDYO010000000
VERSION     DASDYO010000075.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14937
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.075"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..4131
                     /locus_tag="U0290_001887"
     CDS             <1..4131
                     /locus_tag="U0290_001887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="collagen binding domain-containing protein"
                     /protein_id="HEM2301926.1"
                     /translation="IKNKKTGETKEVSITEHGTIIENSLSEGEYIVKEKKAAPGYTLD
                     EQTYNVTLAVKEEAITSSSTKKEAEKTPSVTEQPSKKGNLKAVITDNIFTAVKVENGT
                     GNELGATNRIKNGGAVVLKMNFTFSGKNYKAGDTFKTVLPDSFNFGTTNLTGDFLPST
                     EAKWDLNASTRELTITFFKDGVQEGNYDIELSTALKSFSETEKTSQVAVFNTAGGNTV
                     YQLEIIPEVDKATQVMLEAMPSKVNPDKATVDARFNLTKETSELGELRLSDTAYGGST
                     IINRNSIKVYSTDISAKGTFIGSKQLLTENTDYELIYAPSGLTIKLKEGLKAKGYQVT
                     YERSIDKTNSSLSTIGTSATTVGSSGMLSNGSMTISVTIKAYDHLIKKAVYNPVTQCI
                     DWTINVNYDLANLTPGTVLTDVLTDDNVSYVADSLKIKRVTFNEESGEAVIGDDASND
                     WTVSTISDNGSFNMNYKKTDEKAYQVTYSTKLTDFSPRKIKNEVTDEKGVKATENFDF
                     KPDLLNKEAGEIDYYNNTMDWTITVNSEGINMQNINIVDEFSTGVKSLVSYNVYAYPS
                     DSGYKLLTEGRDFTIQKDVSPAGFKIKLIGNYATTDNKIVVKMKTKIDLTDGAKTLDN
                     KASFSYFDGSLTQYSETIKAEATPETSILANGGKVGKWNPATGEINWIVSVNAMGKKY
                     DKLVLDDEFLDGTTFVEGSLQYRNVVNSSELTDLSIPLEIKGTLAQVGDANYPTKIDT
                     SANKIHLEFGNLDTNRVFVKYKTKPKDNWFFSQWVNNKAIVSDNGADEQIYETKEFAF
                     LQNEVIKVAGNIDNVYGNKVNWNMELLNISPERTLSNPVITNRLEQGNTGAQFIKNSF
                     QVINTKTNEPINEENYDIIFEGNTFTIQFKNYTAMAPIKVSYSTISLLSGPISNETTV
                     EAEDFSNVPMFFKKRNAAVSPVFTVGSGSGIATIGTIKITKVDEDDTTKKLEGAKFQL
                     YTLDGEKSGQEIKTNSEGEILLDGIQSGKYKLVETEAPEGYNISDEYKEGKEITVNSS
                     GEELLLTIKNAMKKGKVILTKKDSASDEVLADAEFELQNAAGSKLKEKLTTAASGNIE
                     ITDLAPGDYKLIETKAPAGYQLDATPVHFTIDFNQSEAAKVSKTNTAKTGTVVLTKKD
                     SATNTELADATFELRNEDGALVRENLVTDDNGEISVADLAPGDYKLIETKAPTGYQLD
                     AAPVHFTIDFNQTEAANVTKTNKKKIGTIIVKFIDVEGNQLNDEEMHTGNVDEEYNVK
                     AKEIVGYTLVKDSANKKGMYKETSQEITFVYEKKAMPIIVEPTEPSKPTEQLTESATV
                     AEPKPIKQNFKTTNKSTNNKRKLPSTGDEFPYTMLFIGLFVSVAGVFFLKKPKQIK"
     gene            complement(4171..4518)
                     /locus_tag="U0290_001888"
     CDS             complement(4171..4518)
                     /locus_tag="U0290_001888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4870 domain-containing protein"
                     /protein_id="HEM2301927.1"
                     /translation="MNDHRILNALSYFSILFAPVIVPVLIWIFAKSEDVTHHAKVALL
                     THIIPTIAGVLCFSSVFVTALTNGGLLANVSFFVTGSLFIFTLIAIVGLFIFNIVRGI
                     QMLLTKNEEDAWI"
     gene            complement(4624..5187)
                     /locus_tag="U0290_001889"
     CDS             complement(4624..5187)
                     /locus_tag="U0290_001889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2301928.1"
                     /translation="MDRRIKKTKQALNQALFTLLDEKTFQQITITDIVTVADVNRGTF
                     YKHYRDKEELLDSIIDEVLADLQKAYQDPYTHKTPFSIQTLTPSMIKIFDHVYGHQAF
                     YTQVIKSTIRPSFQNQVCDVIRELILNDFDYSADSSSIEPLLLASYQAHAIFGMIVFW
                     AEESFAHSPAFMSEQLLHIIQTKNPIL"
     gene            5371..6132
                     /locus_tag="U0290_001890"
     CDS             5371..6132
                     /locus_tag="U0290_001890"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2301929.1"
                     /translation="MGKLNGKVAVVTGAASGMGQQIAILFAKEGAKVVVADLNLEAAQ
                     KTVALIEKEQGTSLAVVANVTKQDDIESMINKATETYGTLDILVNNAGIMDNFVPAGE
                     LTDELWDKVFAINTTGVMRATRKALHIFEEKGQGVIVNIASAGGLFGSRAGAAYTASK
                     HAVVGFTKNVGFQYANKNIRCNAIAPGAVNTNIGTTIYAPDQFGQERAMIGMGTNPRA
                     GDASEIAKVALFLASDDASFVNGTVITADAGWTAY"
     gene            6311..7384
                     /locus_tag="U0290_001891"
     CDS             6311..7384
                     /locus_tag="U0290_001891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diguanylate cyclase"
                     /protein_id="HEM2301930.1"
                     /translation="MVQQLVSNAAILLAGFYIISLVYKEPITKELSINRKMVIGVWAG
                     LLGFALMIFGIPISNNVIVDLRHIPIIMVGFYGGPIPAIVSAVIITASRFLISVNSAA
                     MMAGVIMMLIGIITALFSKRLEKYNIWGVFILNIIACGFVVVNLHLILAKEPDFWINM
                     FIFVSIALVIGAVSAGLMKNMIKSKQLFQKYEQDSTLDYLTRLSNVRQFDEKINHVMD
                     DGSRQVTLMLIDIDYFKNINDTYGHDAGDAILKQLAIILKRNTSDGSEAFRNGGEEFS
                     IVLLDCPIEKGNFFAEQVRKETEDHDFMIPSGKLVKITISVGVSSSKDGANTSEGLFK
                     SADEALYKAKLTGRNRVCIADEN"
     gene            7490..8857
                     /locus_tag="U0290_001892"
     CDS             7490..8857
                     /locus_tag="U0290_001892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HEM2301931.1"
                     /translation="MFDLMDNLLGVQSFGELNKDMPTTLFVTDADGNILISNKFTALT
                     VGMSLEELLRCNVRDLVEDGVYNDSVTLEAIRTKQKKTKVINTKKGFSIRSTSTPILY
                     PDGTVHLVVTMSDETQPDSFKTWRGEAISGNKESLLLEDYKENDGTVIVAESVAMKQI
                     VRVCNQIAPFDSKVLLYGESGTGKEVLSRYIHEKSEQAAGPFISINCAAIPKALFESE
                     LFGHEKGSFTGADIEKPGMLELADGGTLFLDEISEMPLELQAKMLRVLETGEVRRLGS
                     TTETKRRFRLISATNRNLGEMVEKGTFRRDLYYRINVVPVHIPALRERPQDIIGLARQ
                     FIQKFNQKYQKDFQLSGDKTKELLSHNWPGNVRELRNQIERLVVMSGNKEVTVAEIDD
                     FALDLHFKEQTKKDSLYLKDYLQDVEKHFILRVLEESNGNVTKAASVLGIHRSVLYRK
                     LKTLH"
     gene            9087..10670
                     /locus_tag="U0290_001893"
     CDS             9087..10670
                     /locus_tag="U0290_001893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl CoA:acetate/3-ketoacid CoA transferase"
                     /protein_id="HEM2301932.1"
                     /translation="MSKVIKASEAAKLLKDGDTVAFSGFGLACVNEEMAIAVEKRFLE
                     EGAPRNLTVMHASALGDRREKGMSHWGHEGLIKRWIGGIAIASPKMAKLIEEDKCEAY
                     NLPQGVITQLYREIAAKRPGVITKIGMGTFVDPRIEGAKMSASSKDNLVELLTIHDEE
                     WLFYPSFPIQVALIRGTVADEFGNLTLEKEGLHMEVLPIAQAVRNSGGIVIAQVESVA
                     KKGSLNPKDVRVPGILVDHIIISEPENHFQTENTQYNPAFSGHIQVPLGDIEPLPLDD
                     RKVIARRSAAELEPQTILNLGVGIPVNVSTVAAEEGVSDQLILTTEAGSVGGVPAGLA
                     DFGHAYNSEAIVDHHSQFDFYDGGGLDLSVLGLAQTDESGNVNVSKFGSRVAGCGGFI
                     NISQSAKKLIFAGTFTAGGLKTRVADGKLEILQEGKAKKFIKQVQQITFSGEYASTTD
                     QIILYVTERAVFRLENGKMVLTEIAPGVDLEKDILGQMEFEPVIASDLKVMDSGMFSE
                     QWGGLKTIIEKQTREGVSI"
     gene            10667..11890
                     /locus_tag="U0290_001894"
     CDS             10667..11890
                     /locus_tag="U0290_001894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OFA family MFS transporter"
                     /protein_id="HEM2301933.1"
                     /translation="MTKEINRWGVLIGSVGVLLCTGAVYAFSVFAGPLSAAHGWTIPQ
                     VMMAFTINAAIGPIPTILGGILTDKGKAKWAILIGGILFGLGFALTGFATSTTMLYLS
                     YGVLAGLGQGFAYSGCLSNTIRLFPDKRGLASGLITAGMGGATIIAAPIANHLIETYN
                     VMTAFKIMGAVYIAVVIGCSFLIRVAPAGYAPKGWTPPANNAAGMVNVPWTGMVRTVT
                     FYLILLMLGIGAFSGLMIASNASLIGQNMFGLTAASAAAYVSIYSLSNCLGRVVWGAV
                     SDRLGRSNTLMIIYTVIALSLLALATLQSVVGFVIGIIGLGLCFGGTMGVFPSIVMEN
                     YGPKNQGVNYGIVFIGYSTAAFFAPKMAAQIAGQNGGDFTQAFYIAIALAAVGLCINI
                     VYKLREKKQPTKELA"
     gene            11912..12841
                     /locus_tag="U0290_001895"
     CDS             11912..12841
                     /locus_tag="U0290_001895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465694.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF561 domain-containing protein"
                     /protein_id="HEM2301934.1"
                     /translation="MSLTEMLQIKYPILQGAMAQIATYELASAVSNAGGLGIIASGGM
                     SADTLREQIRLCKEKTTKPFAVNIMLMMPNCPELVDVIIEEDVRVVTTGAGTPKPFME
                     KFKAAGIKVIAVIPSVKIAQKMEEIGVDAVVAEGTEAGGHVGETTTMALVRQVVSAVN
                     IPVIAAGGIADGHGMAAVYALGASGVQIGTLFLVAEECPVPASFKQAVLDATDTSTTV
                     TGRRNGAPVRSIKNPMIQKYVELENENASRDKLEELTLGSLRKAVHEGDVENGSVMAG
                     QICGMLKEIRSTSDIIESLMKESKQVASNLVIQ"
     gene            complement(12887..13045)
                     /locus_tag="U0290_001896"
     CDS             complement(12887..13045)
                     /locus_tag="U0290_001896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465693.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301935.1"
                     /translation="MGKYFIIILIALAINGISILFHNDIASLIAVIITAVLLIYLMVD
                     LTKMYRRK"
     gene            complement(13068..13457)
                     /locus_tag="U0290_001897"
     CDS             complement(13068..13457)
                     /locus_tag="U0290_001897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465692.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2301936.1"
                     /translation="MTAKMLHTCIRVKNLTESITFYEKALGLKEVRRKDFPDFEFTLV
                     YMAFEEGGFELELTYNYDQKEAYDLGNGYGHLAVGVPDVHALLKEHQEAGFTVTDLKG
                     LPGEDPFYYFLTDPDGYKTEIIQDGAL"
     gene            13588..14205
                     /locus_tag="U0290_001898"
     CDS             13588..14205
                     /locus_tag="U0290_001898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465691.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2301937.1"
                     /translation="MTKIKRIMTGIIQENCYIIYQDKVALIVDPGDEASKIEAEIAKL
                     EVKPVAVLLTHCHYDHIGALEEIRKTFNIPVYVSPLEQEWLSNPELNLSAHIAGKAII
                     AQPAENEFTLGEYSIEGFRFKVVPTPGHSIGSVSFIFDDFVVVGDALFKGSIGRTDLY
                     TGDFDMLINSIKTQLFVLPDDFPAYSGHGDATTIGHEKKTNPYFN"
     gene            14270..>14937
                     /locus_tag="U0290_001899"
     CDS             14270..>14937
                     /locus_tag="U0290_001899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465690.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2301938.1"
                     /translation="MHSDEEIFKETTPKALLQLLKKDYYFHDYCYQEIIPRGKEIKMN
                     NSKGFQIYLVESGYFSYCLQNEYGDSGIISFVGGEIAINLIPIIKEEPEESVLRSLTE
                     VHCWVLDPDFVERVLDESGQKAKYLLSNLLYTRKVYFKASKRNFMKKELRIRACLKEL
                     GLYMGRVTKDKEFILPDEINNSILAQYANTTREYTNIIVLKLRKEGILDDSHKPWVIK
                     KIDIL"
BASE COUNT         5133 a         2368 c         3110 g         4326 t
ORIGIN      
        1 attaaaaaca aaaaaactgg agaaacaaaa gaagtttcta taactgaaca cgggacaatt
       61 atagaaaatt cactttcaga aggagaatat attgttaagg aaaagaaggc tgctccagga
      121 tatactttag acgaacaaac ttataacgtc actttagctg ttaaagaaga ggctataact
      181 tctagttcaa caaaaaaaga ggcagaaaaa actccatctg ttacagaaca accctctaaa
      241 aaagggaatc tgaaagcagt tataacagat aatattttta ctgcagtaaa ggtggaaaat
      301 ggaactggaa atgaacttgg tgcgactaac cgtataaaaa atggcggagc agtagttctg
      361 aaaatgaatt ttactttctc agggaaaaac tacaaagctg gagatacatt taaaacggtt
      421 ttaccagatt cattcaactt tggaacgact aatttaacag gagatttctt accttcaact
      481 gaagcgaaat gggatttgaa tgcaagcaca cgtgaattaa ccattacttt ttttaaagat
      541 ggtgtgcaag aaggtaatta tgatattgag cttagtactg ctttaaaaag tttctctgag
      601 acagaaaaaa ctagtcaggt agcggtgttt aatacagcgg gtggtaatac agtttaccag
      661 ttagagatta ttcctgaagt agacaaagcc acacaggtaa tgctagaagc gatgccgagt
      721 aaagtcaatc cggataaagc tactgtggat gcgagattta atttaactaa agaaactagt
      781 gaactaggcg aacttagact atcggatact gcttacgggg gttcgactat tattaatagg
      841 aatagtatta aggtctactc aacagatatt agtgctaaag gaacattcat tggctcaaag
      901 caattactta ctgagaatac agattatgaa ttgatttatg caccttcagg attaacaatt
      961 aaattaaaag aaggtctaaa agcaaaaggg tatcaagtta cctatgagcg ttccattgat
     1021 aagacaaatt cgtctttgag tactatcggg acttcagcaa caacagttgg aagttctggc
     1081 atgttatcaa atggaagtat gaccatttca gtaacaataa aagcatatga tcatttaatt
     1141 aaaaaagcag tttataaccc tgtaactcaa tgtattgatt ggacaattaa tgttaattat
     1201 gatttagcaa acttgactcc tggtacggtt ttaacagatg tattaacaga cgataatgtt
     1261 agttatgttg cagattcttt gaagattaag cgagtcactt ttaatgaaga atcaggagaa
     1321 gcagtaatag gcgatgatgc gtctaatgat tggactgttt cgactatatc agacaacggt
     1381 agttttaata tgaactacaa gaaaactgat gaaaaagcat atcaagtaac gtattctaca
     1441 aaactaaccg attttagtcc acgaaaaatt aaaaatgaag taacggatga aaaaggtgtt
     1501 aaagcaacag aaaactttga tttcaagcca gacttactaa ataaagaagc tggagagatt
     1561 gattattata ataatacaat ggattggact attacagtta attcggaagg tattaatatg
     1621 caaaacatta atatcgttga cgagttttct acaggtgtaa aaagtttagt cagctacaat
     1681 gtgtacgctt atccttctga ttcaggctac aaattattaa cagaaggtag agactttacc
     1741 atccaaaaag acgtctcgcc agctgggttt aaaattaaac ttatcggtaa ctatgcgaca
     1801 acagataata aaattgttgt gaaaatgaaa acaaaaattg atttaactga tggagcaaaa
     1861 acactagata ataaagcctc gttttcatat tttgacggta gtttaaccca gtattcagaa
     1921 acaataaagg cagaagcaac accggaaact agtattttag ctaacggtgg gaaggtcggt
     1981 aaatggaatc cggcaactgg tgaaataaat tggattgtat ctgtcaatgc aatggggaaa
     2041 aaatatgata aattggtttt agatgatgaa tttttagatg gtacaacctt tgttgaagga
     2101 tctttacagt atcgtaatgt agttaattca tccgagctga ccgacttgag tattcctcta
     2161 gagataaaag ggactttagc acaagttggg gatgctaatt atccaaccaa aatagacaca
     2221 tcagccaata aaatacattt ggaatttggt aatttagata ctaatcgtgt atttgttaaa
     2281 tataaaacaa aaccaaaaga taattggttc ttctcacagt gggtaaacaa taaagctatc
     2341 gtctcagata atggagcaga tgaacaaata tacgagacga aagagtttgc ttttttgcaa
     2401 aatgaagtta ttaaggtagc tggaaacata gataatgtct atggaaataa agtgaactgg
     2461 aatatggaac tcttgaatat ttctccagaa agaacactgt ctaatccggt tattaccaat
     2521 cgattggaac aaggaaatac gggcgctcag tttattaaaa atagttttca ggtaattaat
     2581 acaaaaacga acgaaccgat aaacgaagaa aattatgata ttatttttga aggaaatacc
     2641 tttaccattc aatttaaaaa ctatactgca atggcgccaa taaaagtaag ctacagcaca
     2701 ataagtttac tttcaggacc aatttctaac gaaacgacgg tggaagcaga agattttagt
     2761 aatgttccaa tgttctttaa aaaaagaaat gcagcagtat caccagtctt tacagtggga
     2821 tctggatcag ggattgcaac gattggcacg attaaaatca caaaagtgga tgaagacgat
     2881 actacgaaga aattagaagg cgcaaaattt cagctttaca cactagatgg tgaaaaatct
     2941 ggacaagaaa taaaaactaa ttcagaaggt gaaattctac tagatggtat acaatctggg
     3001 aagtataaat tagttgaaac agaagctcca gaaggataca acattagcga tgaatacaaa
     3061 gaaggaaaag aaattactgt taattcatct ggtgaggaac ttcttttaac catcaaaaat
     3121 gctatgaaaa aaggcaaggt tattttaacg aaaaaggaca gtgcatcaga tgaagtatta
     3181 gcagatgccg agtttgaatt acaaaacgcc gctgggtcaa aactaaaaga aaaactaaca
     3241 acagctgcga gcggtaatat agaaataacc gatttagcac caggcgacta taagttaatt
     3301 gaaaccaaag ccccagctgg ttaccaatta gacgcgaccc cggttcattt cacaattgat
     3361 tttaaccagt cagaagcagc gaaagtaagc aaaaccaaca cagcaaaaac aggcacggta
     3421 gtgctaacga aaaaagatag cgcaacaaat accgagctag ctgacgccac atttgagttg
     3481 cgaaacgagg acggagcatt agtccgcgag aatctcgtaa cagatgataa tggagaaatt
     3541 agcgtagctg atttggcacc aggcgactat aaattaattg aaaccaaagc cccaactggt
     3601 taccaattag acgcggcacc agttcatttc acgattgatt ttaaccaaac agaagcggct
     3661 aatgtaacca aaaccaacaa gaaaaaaatt ggtacaatta tagttaaatt tatagatgta
     3721 gagggcaatc aattaaatga tgaggaaatg catactggaa atgttgatga agaatacaat
     3781 gtgaaagcta aagaaatcgt tggctacaca ttagttaaag attccgctaa caaaaaaggt
     3841 atgtataaag aaacttcaca agaaataacc tttgtttatg agaaaaaggc aatgccgatt
     3901 attgtggaac ctactgaacc atcaaaacca acagaacagc taacagaatc agctacagta
     3961 gcagagccaa aacctataaa acaaaacttt aaaacaacaa acaaatcaac aaataataag
     4021 agaaaacttc cttctacagg agatgagttc ccttatacaa tgctattcat tggattgttt
     4081 gttagtgttg ctggagtatt cttcttaaaa aaacctaaac aaataaaata aaaaaaagct
     4141 atcctaagaa atttaggata gctttttcat ttaaatccaa gcatcttctt catttttcgt
     4201 taaaagcatt tgaatacctc gaacaatatt aaagataaac agtccaacaa tagctattag
     4261 tgtaaatata aataagctac cggtaacgaa aaatgataca tttgcgagta agccgccatt
     4321 tgtcaaagct gtaacgaaaa cactggagaa acatagaaca ccagcgatag tcggaataat
     4381 gtgagttagt aatgcaactt tagcatgatg agtaacatcc tctgatttag caaaaatcca
     4441 aatcaatact ggcacaataa caggtgcaaa taggatacta aaataactta aagcatttaa
     4501 aatacgatga tcattcataa tcaacacacc tttctaagat gtctttatta tagcaagact
     4561 aggattatga agccctcgtt tcaagttaca aagaaggaaa ataatataac aaatatgtaa
     4621 gaattataag attggatttt tagtctgaat aatatgaaga agttgctctg acataaacgc
     4681 cggtgaatga gcaaaacttt cttctgccca aaaaacaatc atgccgaaaa tcgcatgtgc
     4741 ttgataagat gcaagtaaca agggctctat actcgaactg tcagctgaat aatcaaagtc
     4801 atttaaaatc agttcccgaa taacgtcaca aacttgattt tgaaaactgg gacggattgt
     4861 cgattttata acttgtgtat aaaaagcttg atgaccgtat acatgatcaa aaatttttat
     4921 catggaaggt gtaagtgttt gaatggaaaa aggcgtctta tgtgtataag ggtcttgata
     4981 cgctttttgt aaatcagcca gcacttcatc aataatacta tctaaaagtt cttctttgtc
     5041 acggtaatgt ttatagaacg tgcctcgatt aacatctgct actgtaacaa tatccgtaat
     5101 cgtaatctgt tgaaaagttt tttcatcaag aagagtaaat aaagcttggt ttaaggcttg
     5161 ttttgttttt ttaatccttc tatccatcat ttgaaactcc catccgagaa aatttcctac
     5221 tactatacat ataacgcaaa agtgttgctt aatcaacaaa acaggctttc tttacatatt
     5281 gatagcgctt tatatcggag ctataattaa aataagaagg agagaaattt tatccttttt
     5341 agcgtaacaa aagtgaagga ggaaataaca atggggaaat taaatggaaa agtagccgta
     5401 gtaactggtg cagcgtctgg aatggggcaa caaattgcga ttctttttgc gaaagaaggg
     5461 gcgaaggttg ttgttgcgga tttaaattta gaagcggcac aaaaaacagt agcgttaatt
     5521 gaaaaagaac aaggtacatc acttgcggtt gttgcgaatg tcacgaaaca agacgatatt
     5581 gaaagcatga ttaacaaagc tactgagaca tacggcacgt tagatatttt agtaaacaat
     5641 gcgggcatca tggataattt tgttccagcc ggcgaattaa ctgatgaact ttgggataaa
     5701 gtgtttgcga taaatacaac tggtgtaatg cgagcaacta gaaaagcact tcatatcttt
     5761 gaagaaaaag gacaaggtgt tatcgttaat atcgcatctg ctggaggttt gtttggttca
     5821 agagcagggg cagcgtatac agcttctaaa catgctgtcg ttggttttac aaaaaatgtt
     5881 ggtttccagt atgctaataa aaatattcgc tgtaatgcta tagcacctgg agctgtaaat
     5941 acaaatattg gtactactat ttatgctcca gatcaatttg ggcaagaacg agctatgatt
     6001 ggaatgggaa caaatcctcg agctggtgat gcttctgaaa tcgccaaagt agctctattt
     6061 ttagcttcgg atgatgctag ttttgtaaac gggacggtaa ttacagcaga cgctggttgg
     6121 acagcttact aaaaatataa aaaatccgca tgagagaatt attttctttt gcggattttt
     6181 tatgagaaaa tagaaagatg gatatttttt aacaacttcg cgtttagggg ttgtttcttt
     6241 gtgtagagag aatgaatagt tgtgagcata atggggtatt aaataacaaa gtgaaaggcg
     6301 gggatgcttt ttggttcaac agttggtaag taatgcagcg atattactcg caggatttta
     6361 tattatttct ttagtctata aagaaccaat tacgaaagaa ttatcgataa atagaaaaat
     6421 ggtgataggc gtatgggcag ggctactagg atttgcgcta atgatttttg ggataccgat
     6481 ttcaaataat gtaattgttg atttgcgtca tatccctatt attatggtgg gtttttatgg
     6541 cgggcccatt ccggcaattg tttcggcggt cattattaca gcttcacgat ttttaatttc
     6601 agtgaattct gcagcgatga tggctggtgt aatcatgatg ctgattggca ttataacagc
     6661 tcttttcagc aaacgcttag aaaaatataa tatttggggc gtttttattt tgaatattat
     6721 tgcgtgtggt tttgtagtcg ttaacttaca tttgatttta gcaaaagagc cagacttctg
     6781 gataaatatg tttatatttg tatcgatcgc gcttgtaatt ggcgctgttt ccgcaggttt
     6841 aatgaagaat atgattaaat caaagcaatt gtttcaaaaa tacgaacaag actctacgct
     6901 cgattatctg acgcggttat caaatgtaag gcaatttgat gaaaaaatca accatgtaat
     6961 ggacgatgga agtaggcaag tgacattaat gttaatcgat attgattact ttaaaaatat
     7021 taacgataca tacggccatg acgctggtga tgccattttg aaacaattag ctattatttt
     7081 aaaacgaaac acatcagatg gttctgaggc atttagaaac ggcggggaag aattttccat
     7141 tgtcttatta gattgtccga ttgaaaaagg taattttttt gctgaacaag tgcgaaaaga
     7201 aacggaagat cacgatttta tgataccgag tggaaaacta gtgaaaatta caatttccgt
     7261 tggggttagc agtagtaaag atggtgctaa tacaagtgaa ggattattta aatctgctga
     7321 tgaagcgctg tataaagcaa aattaaccgg gcgaaaccga gtatgtattg cagatgaaaa
     7381 ttagcttgtc gcaaaaaaac gagtacttct aggagatagc ttatgttata atagattgtg
     7441 taatgatgag caaataacta ggaaactagt ccaaaaggat gagcttttaa tgtttgactt
     7501 aatggataac ttgctgggag tacagtcatt tggtgaatta aataaggaca tgccaacgac
     7561 actttttgtc acggatgcag atggtaatat tttaatttct aataaattca ctgcgctcac
     7621 agttggaatg tcgctcgaag aattgcttcg ttgtaatgta agagacctag tggaagacgg
     7681 tgtatacaat gattctgtca cactagaagc aatccgcaca aaacaaaaga aaacaaaagt
     7741 gatcaatacg aagaaaggtt ttagcatccg ctcgacttct acgccaatac tttatcctga
     7801 tggcacggtg catttagttg ttactatgtc agatgaaacg caaccagata gttttaaaac
     7861 atggcgtggt gaggcaattt cggggaataa agagtcgctt cttcttgagg attataaaga
     7921 aaatgatggc actgtgatag tagcagagag cgtcgcgatg aagcagatag ttcgtgtgtg
     7981 caaccagatc gctccgtttg acagtaaagt cttattatac ggggagtccg gtactggtaa
     8041 agaagtcttg tcgcgctata ttcatgaaaa aagtgaacaa gctgctggac cttttatctc
     8101 gattaactgt gcggcaatcc caaaagcatt atttgaatct gagctttttg gacatgaaaa
     8161 aggttcattt accggtgcgg atattgaaaa acccgggatg cttgaactag ctgatggtgg
     8221 cacattattt ttagatgaaa tttctgaaat gccactagag ctacaagcga aaatgctccg
     8281 agtgcttgaa actggagagg taagaaggct tggttcaaca accgaaacga aacgccgctt
     8341 tagactgatt tcagcgacca atcgaaacct tggggaaatg gttgaaaaag gaacatttag
     8401 gcgtgattta tattatcgta ttaatgttgt gccggttcac attccagcac tcagagagcg
     8461 accgcaagat attattggtc ttgcacgtca gttcatacaa aaattcaatc aaaaatacca
     8521 aaaagatttt cagttaagtg gcgataaaac gaaagaatta ctttctcata attggccagg
     8581 aaatgttcgt gaacttagaa accagattga gcgattagtt gttatgtctg gaaataaaga
     8641 agtgactgtt gcagaaatag atgatttcgc actagactta cattttaaag aacaaacaaa
     8701 aaaagactca ctttatttga aagattattt gcaagacgtg gaaaaacatt ttatattgcg
     8761 agtactcgaa gaaagtaatg gaaacgtgac aaaagcggcc agtgtgcttg gaattcaccg
     8821 ctctgtttta tatcgaaaac taaaaacact tcattaaata gaaggcctaa tcggattttg
     8881 cgattaggcc ttttttgttg cattttcgcg acttctgttt gtaaaaacca tcattttgac
     8941 gtctcttttt tgcgacaata aataatattt gaatttataa agtgctttat agagccattt
     9001 ttgatgttgg cacggaagtt gctttataaa gaactgcatg tcattacaaa tatatgtgaa
     9061 taattgaaca atgaggagtg aggaatttgt caaaagtaat aaaagctagt gaagcagcaa
     9121 aattattaaa agatggcgat actgttgctt ttagtggttt cggtttagct tgtgttaatg
     9181 aagaaatggc tatcgcggtt gaaaagcgtt ttttagaaga aggggcaccg cgtaatctaa
     9241 cagttatgca tgctagtgcg cttggtgatc gcagggaaaa aggaatgagt cactggggac
     9301 atgaaggatt aattaaacgc tggattggcg gaattgcgat tgcttctcct aaaatggcga
     9361 aactaattga agaagacaaa tgtgaagcat acaatttacc acaaggtgta attacgcaac
     9421 tgtatcgtga aattgcagct aaacggccag gcgtgattac aaaaattggc atgggaacat
     9481 ttgtagatcc acgtattgaa ggggcaaaaa tgtccgcgag ttctaaagac aacttagtag
     9541 agctattgac gattcacgac gaagaatggc tattttatcc aagtttccca attcaagttg
     9601 cgctcattcg cggaactgtg gctgatgaat ttgggaactt aacgttagaa aaagaaggct
     9661 tacatatgga agtcttacca attgcacagg cagttcgaaa ttcaggcgga attgtaatcg
     9721 ctcaagtaga atctgttgcg aaaaaaggat cgcttaatcc taaagatgtt agagttccag
     9781 gaattttggt tgatcatatt attatttcag aaccggaaaa tcattttcaa actgaaaata
     9841 cacagtacaa cccagctttt tcagggcata ttcaagttcc gcttggagat attgagccac
     9901 ttccgttaga tgaccgtaaa gtaattgcgc gtcgttcagc agcagaacta gaaccacaaa
     9961 ctattctaaa tttaggtgta ggaattccgg tgaacgtatc aactgtagca gcggaagagg
    10021 gcgtgagtga tcaattaata ctaacaacgg aagctggttc tgttggtggt gttccagcag
    10081 gtttagcaga tttcggtcat gcttataaca gtgaagctat tgtcgatcat cattcgcagt
    10141 tcgattttta cgatggtgga ggactcgatt tatccgtact tggtttggcg caaaccgacg
    10201 aatccggtaa tgtgaatgtc agcaagtttg gctcaagagt tgctggctgc ggtggattta
    10261 ttaatatctc ccaatcagcg aaaaaattaa tttttgccgg aacttttaca gcaggtggat
    10321 taaagacgcg tgtagctgac ggaaaattag agattttaca agaaggaaaa gctaaaaagt
    10381 ttatcaaaca agttcaacaa atcacattta gtggcgaata cgcttcaacg accgaccaaa
    10441 tcatcctcta tgtgacagag cgagctgtat tccgtttaga aaatggcaaa atggttctaa
    10501 cagaaatcgc gccaggagta gatttagaaa aagatatcct tggacaaatg gaattcgaac
    10561 ctgttattgc gagtgattta aaagtaatgg atagcggtat gtttagtgaa caatggggcg
    10621 gcttaaaaac tattattgaa aaacaaacaa gagagggagt atctatatga caaaagaaat
    10681 aaaccgttgg ggagtcttaa ttggctctgt tggtgttctg ctttgtaccg gtgcggtata
    10741 tgcatttagt gtttttgctg gaccgctaag tgccgctcat ggttggacaa ttccgcaagt
    10801 tatgatggca tttacaatta atgctgcgat tggaccgatt ccaactattt taggtgggat
    10861 tttaacggat aaagggaaag caaaatgggc tattttaatt gggggaatcc tgtttgggct
    10921 tggttttgcg ttaacaggat ttgctacttc aacgacgatg ctttatttgt cttatggtgt
    10981 ccttgctggg cttgggcaag gttttgcgta ttcaggatgt cttagtaaca cgattcgtct
    11041 tttcccagat aaacgtggtc ttgcttctgg acttattact gcaggaatgg gtggagcgac
    11101 aatcattgct gcaccgattg cgaaccactt aattgaaaca tataacgtaa tgacagcatt
    11161 taaaattatg ggagctgttt atatcgcagt tgtcattgga tgtagtttcc ttattcgcgt
    11221 cgcaccagct ggttatgcac caaaaggttg gacaccgcct gctaataatg cagctggtat
    11281 ggtaaatgta ccttggacgg gaatggttcg aacagttact ttttatctga ttcttttaat
    11341 gctaggtatt ggcgcatttt ccggtctgat gattgcttct aatgcatcct taattggtca
    11401 aaatatgttt ggcttgacgg ctgcatcggc tgctgcttac gttagtattt attcactaag
    11461 caactgttta ggtcgagtag tttggggcgc tgtatctgac cgtctaggta gatctaatac
    11521 attgatgatt atctatacag tgattgcttt atctttacta gcacttgcaa cgcttcaatc
    11581 tgttgttgga tttgttatcg gaattattgg acttggactt tgctttggtg gaacaatggg
    11641 cgttttcccg tctatcgtta tggaaaatta cggtccgaaa aatcaaggcg tcaactacgg
    11701 aatcgtcttc attggttatt ccacagcggc cttctttgca ccaaaaatgg cagcgcaaat
    11761 cgccggtcaa aacggtggcg acttcacaca agctttctat atagctatcg cacttgctgc
    11821 tgtaggactt tgcattaata ttgtttataa attacgtgag aaaaaacaac caactaaaga
    11881 attagcgtaa aaatagagag gagaaaagaa aatgagttta actgaaatgc tacaaatcaa
    11941 atatccaatt ttacaagggg caatggcaca aattgccaca tatgaattag cttccgcggt
    12001 atcaaatgca ggtgggctag gaattatcgc atcaggtgga atgtcagcag acacattacg
    12061 agaacaaatt cgcctttgta aagaaaagac aacaaaaccg ttcgctgtaa atatcatgct
    12121 gatgatgcca aattgtccag aacttgtcga tgttattatt gaagaagatg tgcgagttgt
    12181 tacaactggg gcaggcacgc ctaaaccatt tatggaaaaa tttaaagcag ctggaattaa
    12241 agttatcgcc gttatcccgt ctgtgaaaat tgctcaaaaa atggaagaaa tcggtgtgga
    12301 cgctgttgtt gcagaaggga cagaagcagg gggacatgtc ggagaaacaa caacgatggc
    12361 actcgttcgt caagttgttt cagcagtaaa tattcctgtc attgcagcag gcggtattgc
    12421 agatggtcac ggaatggcag ctgtttatgc gttaggcgca agcggtgtcc aaatcggcac
    12481 acttttcctt gttgctgagg aatgtccggt tccagctagc tttaaacaag cggtacttga
    12541 cgcaacggat acaagcacga ctgtaacagg tcgtcgcaat ggtgcgccag ttagaagtat
    12601 taaaaaccca atgattcaaa aatatgttga actagaaaac gaaaatgcct ccagagacaa
    12661 attagaggaa ttaacacttg gctctcttag aaaagcagta catgaaggtg acgttgagaa
    12721 tggttcagtt atggctggac aaatttgtgg tatgttaaaa gaaattcgtt ccactagtga
    12781 tattatcgaa agcctcatga aagaatctaa acaagttgca agcaatttag tgattcaata
    12841 ataaaaagag tcagtaatat cctggtggat tttgctgact ctttttttat ttacgtcgat
    12901 acatttttgt taagtctacc atcaaataaa taagtagaac agctgtaatg atgacagcga
    12961 taaggcttgc tatatcatta tggaataaaa tactgattcc attaattgct agtgcgatca
    13021 aaattataat aaaatatttt cccattaagc ttctccagtt cttctaatta taaagcgcca
    13081 tcttgaatga tttctgtttt ataaccatct ggatctgtta agaaataata gaatggatct
    13141 tcgccaggta gtccttttaa atctgtcaca gtaaaaccag cttcttggtg ttcttttaat
    13201 aaagcatgta cgtccggaac accaactgct aagtgaccat aaccatttcc taaatcgtag
    13261 gcttcttttt ggtcgtagtt gtacgttaat tctagttcaa aaccgccttc ttcaaacgcc
    13321 atatatacta atgtgaattc gaaatccggg aagtccttgc ggcgaacttc tttaagtcct
    13381 aatgcttttt cgtaaaaagt aatcgattct gttaggtttt ttacgcggat acatgtatgt
    13441 aacatttttg cagtcatttt tattcctcct tttaaacttc tttcttcatt gtagtatatc
    13501 tcggaagtga atacaaacaa ggaatattga tggaagtaag gtggcttttt aggtataatg
    13561 atgaatgtga agaaaggcgg aagtgaaatg acaaaaatca aacgaatcat gacaggaata
    13621 atccaagaaa attgttatat catttatcaa gataaggtag ctttaattgt tgacccaggc
    13681 gatgaagcaa gtaaaattga agcagaaatt gcaaaacttg aagtaaaacc agtggcagtt
    13741 ttgttaactc attgtcacta tgatcatatt ggtgctttag aagagattcg caaaacattt
    13801 aatattccag tatatgttag cccactagaa caagaatggt tatccaatcc agaattaaat
    13861 ttatctgcgc acatagctgg taaagcaatt atagcgcaac cggcagaaaa tgaatttacg
    13921 ttaggtgaat atagtataga aggttttcgt tttaaagtag taccgacacc agggcattct
    13981 atcggaagcg ttagttttat tttcgatgat tttgtcgtag ttggcgacgc tttgtttaaa
    14041 ggtagtatcg gtcgtacgga tttatacaca ggagatttcg atatgttaat aaatagtatt
    14101 aaaacacaac tgtttgtact tccagatgac ttcccagcct attcaggtca tggtgatgca
    14161 accactatcg gtcatgaaaa gaaaacaaac ccatatttta actaaaaaag aacttgcaga
    14221 agcatttatt ctgcagtttt tttgtaatca atggaaagga tgttggaaaa tgcattcaga
    14281 tgaggaaatt ttcaaagaaa caacgccaaa agcattacta caattactaa aaaaagatta
    14341 ctactttcat gattattgtt atcaagaaat tattcctaga ggtaaagaaa tcaagatgaa
    14401 taattcgaaa ggtttccaaa tatacttagt cgaaagcgga tacttctctt attgcctcca
    14461 aaatgaatat ggagattctg ggattattag ctttgttggt ggcgaaatag caattaattt
    14521 aattccgatt attaaagaag aaccagagga gtccgtactg cgtagtttga cagaagttca
    14581 ttgttgggta cttgatcctg attttgtgga acgtgttttg gatgaatcgg gtcaaaaagc
    14641 gaaatatcta ttatctaact tactttatac aagaaaagtt tattttaaag ctagtaagcg
    14701 taattttatg aagaaagaac ttcgtattag agcatgctta aaagagcttg gtctgtacat
    14761 gggcagagta acaaaggata aggaattcat tttgcctgat gaaatcaata attctatttt
    14821 agcccaatat gcgaatacta ctcgagaata tacgaatatt attgtactaa aactacgaaa
    14881 agaaggaatt ctcgatgata gtcacaaacc gtgggtcatt aagaaaatag acatact
//
LOCUS       DASDYO010000076        14917 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.076, whole genome shotgun sequence.
ACCESSION   DASDYO010000076 DASDYO010000000
VERSION     DASDYO010000076.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14917)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14917)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14917
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.076"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(104..883)
                     /locus_tag="U0290_001900"
     CDS             complement(104..883)
                     /locus_tag="U0290_001900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463813.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbon-nitrogen family hydrolase"
                     /protein_id="HEM2301939.1"
                     /translation="MWKLALCQTDVVFKYPDANYARIEKAIVEAAKNGADIAVLPEMW
                     NTGYALNELAGVADLNGERTKEFLATLSEKHQIAIIGGSVSISEGTKFSNTMYAFDKY
                     GGLLSSYKKVHLFQLMNEHLYLEAGNDKNLFRLDGVSCAGFICYDIRFPEWIRKHTSE
                     GSEVIFVSAQWPAERVTQWEQLLIARAIENQAFVVAVNRVGDDPNNHFNGHSLVIDPL
                     GNIVAHGGEDEGNIYAEIDLKLVAETRGIIPVFTDRRPELY"
     gene            complement(973..1635)
                     /locus_tag="U0290_001901"
     CDS             complement(973..1635)
                     /locus_tag="U0290_001901"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463814.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301940.1"
                     /translation="MSLFFEEWGPILWQGFLETLTMTGITLVISLAIGLPLGVFLTLT
                     RKGGQSENLVAYSILNWVINILRSLPFIILLFLMIPVTRFVVGTTIGIQGVIMPLVVF
                     TAPYIARLMESALLEVDRGVVEAYQAMGISTPKIIWSVVIREARSGIVLGLTIATIGL
                     IGATAMAGLVGAGGLGTIAYQYGFQRFEPTVMYTTIIILIIMVQALQSFGNFLSRRLK
                     KD"
     gene            complement(1632..2648)
                     /locus_tag="U0290_001902"
     CDS             complement(1632..2648)
                     /locus_tag="U0290_001902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463815.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine ABC transporter ATP-binding protein"
                     /protein_id="HEM2301941.1"
                     /translation="MIELHQVSKSFNVNGKTVEAVKNVSITVEKGEIFGVVGYSGAGK
                     STLVRCINLLERPDAGQVVIDGKNLSTLSSKELRVARRKIGMIFQGYNLLKTATVYDN
                     IAKPLKLEGVPKDEIETRVNKYLSIVGLEDKRNNYPSQLSGGQKQRVAIARALAHEPE
                     ILLSDEATSALDPETTEAILQLLLKINAELGITIFLITHELDVIQRICDRVAVMENGH
                     LVEQGTVLDIFTKAKHSTTKRFVGSEASFDIPQDLLEKYVATGKLVSLHFIGDEADEP
                     ALALVSRKFDVLPSILAGGIDHLKNGTLGKLLVHLKGDEVEYSKAISYLKESGVVVEE
                     VELL"
     gene            complement(2663..3484)
                     /locus_tag="U0290_001903"
     CDS             complement(2663..3484)
                     /locus_tag="U0290_001903"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463816.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MetQ/NlpA family ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM2301942.1"
                     /translation="MRKLTKGLGILLASSLVLGLAACGGGSDDKALSTEKITIGTTAG
                     PHQQIAEEVQKLAKKDGLEIKIKTFDDYNTPNTALNDGDLDANNYQTIPFLEQQKKDK
                     GYKLDVAFKTVAFPMGIYSNDIKDLKNLKKGDKIAVPNDPSNEYRGLKLFEDAGVIKL
                     KDGVEEKATKKDIAENPLDLEIVELEASQIPAQLDEVAAAAINTNFAMGAGLSINKDA
                     IYHEPTKDNPYPNVFVVRSANKDDEVVKTLEKYYHSAEVKAFIEKEFNGSVVPAF"
     regulatory      complement(3593..3712)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            3865..5046
                     /locus_tag="U0290_001904"
     CDS             3865..5046
                     /locus_tag="U0290_001904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxal phosphate-dependent aminotransferase"
                     /protein_id="HEM2301943.1"
                     /translation="MKISKRLQNLPDQFFSSLVEKVGKKVAEGHDVINLGQGNPDQPT
                     PKHIVEAMKTASEKPLNHKYSLFRGKHELKQAAADFYAREYNVTIDPNTEVAILFGTK
                     TGLVELPMCLMDPGDTMLLPDPGYPDYLSGVVLGEVQFEKMPLIAANNFLPDFTKIPE
                     DIAEKAELMYLNYPNNPTGAVATADFFEETVAFAKNHNIVVAHDFAYGGIGFDGKKPI
                     SFLEANGAKEVGIELYTLSKTYNMAGWRVGFAVGNSEVIEAINLIQDHMYVSLFPGIQ
                     DAAIEALTGDQTCVGELTARYESRRDAFISACKKIGWEAVAPAGSFFAWMPVPENFTS
                     SEFADYLLEEVSVAVADGSGFGEFGEGYVRVGLLMDEERLEEAVTRVSKLHLFDKVTQ
                     Q"
     gene            5259..5972
                     /locus_tag="U0290_001905"
     CDS             5259..5972
                     /locus_tag="U0290_001905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2301944.1"
                     /translation="MAEKKILVVDDEKPIADIVKFNLNKEGFDVYCAYDGDEALELVE
                     EVQPDLILLDIMLPGRDGIEVCREVRKKYDMPIIMVTAKDSEIDKVIGLELGADDYVT
                     KPFSNRELIARVKANLRRHSQVSSNAAEEEENSELEIGSLIIHPDAYVASKRGETIEL
                     THREFELLHYLAKHMGQVMTREHLLQTVWGYDYFGDVRTVDVTVRRLREKIEDNPSHP
                     AWLVTRRGVGYYLRNPEQE"
     gene            6157..7989
                     /gene="walK"
                     /locus_tag="U0290_001906"
     CDS             6157..7989
                     /gene="walK"
                     /locus_tag="U0290_001906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall metabolism sensor histidine kinase
                     WalK"
                     /protein_id="HEM2301945.1"
                     /translation="MHKMRFFQSVQFKLVIMYLLLIIVAMQVIGAYFVRELEGQLEKN
                     FQDSITNSITLLDYNAREEIIKNSDNSVKLQNDIRELLVDYSRASSNLIEVRIVDDKG
                     KILGTSNLNNQGIVGQKSNDPLVKRTLSLGTTSEDKIYKDESNKNNRVWVNVSSIKNK
                     GQVIGAIYLVADIESVYKQVDDITNIFITGTLIAMIITAVLGILLSRTITKPIIEMKR
                     QAYAMARGNYSRKVKVYGVDEIGELADSFNTLTKRVQEAQAMTEGERRKLSSVLAYMT
                     DGVIATDRRGKVILINTPAEKMLRVKHESANGRSIIDVLDIGDTYQFEDLMEVDGSLT
                     MDRSTLDKPYVLRANFSVIQRETGFNNGVIAVLHDITDQEKVDQERRDFVSNVSHELR
                     TPLTSMHSYLEALSDGAWEDKEIAPRFLEVTQNETERMIRLVNDLLKLSRMDGGREQL
                     EKSFVNFTDFFNHIIDRFEMMKKETIMFKRHIPREPVIIEIDEDKVMQVLDNIISNAN
                     KYSPDGGRISFYLKKFEDEIEVSIADEGLGVPDEDLANVFDRFFRVDKARSREMGGTG
                     LGLAIAREVIEAHGGRIWAERNKTKGTIIKFTLPYSDLPEDDWE"
     gene            7986..9308
                     /locus_tag="U0290_001907"
     CDS             7986..9308
                     /locus_tag="U0290_001907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator"
                     /protein_id="HEM2301946.1"
                     /translation="MMKKTGFRSFILTILVVLSIVLSYFIWKGQPDYEAINVKEVEKT
                     TIDKTMTTSQVFKPYKLAVNANENNYQSLDADLLNELMAQGKAFSFSEVVLASKKSSE
                     DYEKLIHKNGTIEIIFPNNIPFSIFAQIFQVEGEGLESAFFNRIVFDINKTDTGLHSV
                     YFTNDDQENIYQSSLQNKDIDKIEKIVKKNESKLTQNDKLISNKRNLFLSSEKTKLNR
                     KKYIIDSLEINLFTSALFQDSGTVKSEGNTYTDGSSVIEMDTDNKVLEYVNPSQERTN
                     PEDLSSVKRAGLIQDSFNFVNDHAGWTGDGAYYFTGYAAESATTNFSLFIDNLQVYNE
                     NGMADISVTEGLEAVYKYMRPFFRLDTDVPGEKKEVTLPSSYSVYSALAQNPNVKAEE
                     IEDIVPGYHMTRSESSGMNRLVTLEPTWLYKYHDKWFIFQPDAEKAGE"
     gene            9311..10150
                     /locus_tag="U0290_001908"
     CDS             9311..10150
                     /locus_tag="U0290_001908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system regulatory protein YycI"
                     /protein_id="HEM2301947.1"
                     /translation="MDWRKTQMIFIVTLLILNVFLAVIFFNKQLSDDPDTLGNETLEE
                     RLKADNISHPDLSTKPTSGSIFTTERAAFTTKDVSDLTGQAITLKDNNKQIYSVLQTP
                     VKAGKKGSNPEFQKFMESDVYRGESYQFWNYDKDARTLTFNQLINNNMVLFDEAGQIT
                     FYLDQDDRVISYEQTWMSKQDDLKDKTNLMSATDALEAVYQHGELKQDSDVVSATFGY
                     YTTVQLPSGNVYFPVWCFEVKHSGETNYVLVNAKDEQVINQSDNKSTTEPGTELSSRQ
                     KTK"
     gene            10270..11100
                     /locus_tag="U0290_001909"
     CDS             10270..11100
                     /locus_tag="U0290_001909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2301948.1"
                     /translation="MFANKILTEKDTDQIRFSILASGSSGNATLVETGDQKILIDCGL
                     SGKKMEGLFAQVGRDMNDLDAILITHEHSDHIKGLGVLARKYKLPIYANAKTWKAMDN
                     MIGEVSSDQKFQFDMETVKTFGSMQVESFGVSHDAIEPMFYIFHKGNKKFVMITDTGY
                     VSDRMKGHIAGADAYLFESNHDVEMLRMGRYPWNVKRRILGDEGHVSNEDAAIAMSEV
                     ITDQTKRIYLGHLSKDNNMKELARMSVTQTLMAEGIDVGGKLEIFDTDPDNATSIFTI
                     "
     gene            11198..12700
                     /gene="htrA"
                     /locus_tag="U0290_001910"
     CDS             11198..12700
                     /gene="htrA"
                     /locus_tag="U0290_001910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine protease HtrA"
                     /protein_id="HEM2301949.1"
                     /translation="MDEKEKNLNENSENESTPKREVEDTLHTPESAQPVQETPIVEGV
                     TPEGEKFAGATEDAAEASSTNAFFEEASNKEPEPARPAPGPRRAGTTGGGAVPPNRVN
                     NGGSGNGNGEPPKRGKHFIGYFLTALIGVIIGGLIIFFVAWDNGDNADTTSNSNNKAT
                     KVEKVSVDTTSDVTKAVDKVQDAVVSVLNYQSSSSLDGTTTSEQEASSGSGVIYKKAN
                     GKAYIVTNNHVVADANKLEVTFTNGKKSEAKLLGTDEWNDLAVLEIDDKNVTTVAAFG
                     DSDSLKLGEPAIAIGSPLGTEFSGSVTQGIISGLNRAVPVDTNGDGTEDWEADVIQTD
                     AAINPGNSGGALINIEGQVIGINSMKISMENVEGISFAIPSNTVEPIIEQLETKGEVE
                     RPSLGVSLRDVDTIPETQQKNILKLPDSVDYGAMVQQVVSGSAADKAGLKQYDVIVEL
                     NGQKVTNSMTLRKILYGNDVKIGDKVKVKYYRDGKEKSTDIKLEAAKTTT"
     gene            13388..13867
                     /gene="rlmH"
                     /locus_tag="U0290_001911"
     CDS             13388..13867
                     /gene="rlmH"
                     /locus_tag="U0290_001911"
                     /EC_number="2.1.1.177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA
                     (pseudouridine(1915)-N(3))-methyltransferase RlmH"
                     /protein_id="HEM2301950.1"
                     /translation="MNIQIVTVGKLKEKYLVQGIAEYLKRLSAFAKVTIVEVPDEKAP
                     EVLSDAEMKQVKDKEGARILAKIPDDAHVIALAIDGKMKSSEEFAADLDKLATYGKSK
                     VTFVIGGSLGLSEAVLKRSNERISFGRLTLPHQLMRLVLVEQVYRAFRIVRGEPYHK"
     gene            complement(13899..14762)
                     /locus_tag="U0290_001912"
     CDS             complement(13899..14762)
                     /locus_tag="U0290_001912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2301951.1"
                     /translation="MDIENMKAFNKVAELKSISAAANELHHLQSNMSNKIKNIEKQFQ
                     TQLFFRHSNGVEPTKEGEKIYQQFKKMILLWEETIDIINNEEETISIGITQSSLPMEF
                     NTIIKEFYQQFPNKKLSIVSGSTSELIPKIANRELTIAYVAELEKENLFQDSQIISQT
                     LSWDKLVFAGNTAGKSVQKILAEERLYVFSKQCYSYRALAALINDINIPNVSISEINI
                     PETLVEICNNELGIGIIPESIALNYHFLNYETLPTEYASLRKTLIYHADHTISNGEKW
                     LIEKSKPAFKS"
BASE COUNT         4894 a         2606 c         3027 g         4390 t
ORIGIN      
        1 attaatctat attaattata ccaaattgcc acttttttgc cgataatatg aacatttaat
       61 gagaaaaaga tgcaaaaaat attattttgc atcttttagc tatttagtaa agctcaggtc
      121 gtctatctgt gaaaactgga atgatgcctc gcgtttcagc aacaagtttt aagtcaatct
      181 cagcataaat atttccttcg tcttcaccgc catgagcgac aatatttcca agtggatcaa
      241 tcacaagtga gtgcccattg aaatgattat taggatcatc gccaactcga ttgactgcaa
      301 cgacaaaagc ttgattttca atagcgcgtg caataagtag ttgctcccac tgagtaacac
      361 gttcggctgg ccactgagct gaaacaaaaa tgacttccga tccttctgaa gtgtgtttgc
      421 gaatccattc tggaaatcta atatcatagc aaatgaaacc agcgcaagaa acaccgtcca
      481 gtcgaaatag atttttatca ttcccagcct ctaaatagag atgctcattc ataagctgaa
      541 ataagtgaac cttcttatat gaagaaagta gtccaccata tttgtcgaaa gcatacattg
      601 tattagaaaa tttggttcct tccgaaatag agaccgagcc accgataata gcaatttggt
      661 gtttttcaga aagtgttgct aaaaattctt tcgttctctc cccatttaaa tcagcaaccc
      721 cagctaattc atttaaagca taacctgtat tccacatttc tggtaaaact gcgatatctg
      781 ccccattttt tgcagcttca actatagctt tttcaatccg tgcatagttt gcatcaggat
      841 atttaaaaac tacatcagtt tgacataatg ccaacttcca catgttcttc gctccctttt
      901 tcttttaaaa ataacacaag cttggtgacg agtccatatt ggaacacttc gcaccaagct
      961 ctaagtagtg aattaatctt ttttaagacg tctagataag aaattaccga atgattgtag
     1021 tgcttgaacc atgataatta aaataataat ggttgtatac atgacagttg gttcaaaacg
     1081 ttggaaacca tattggtaag caattgttcc gagtccacca gcaccaacaa gtccagccat
     1141 tgcagtcgcg ccgattagac cgattgtagc gatagttaag ccaagaacga taccagaccg
     1201 agcttcgcga ataacgacac tccaaatgat tttcggtgta gaaataccca ttgcttgata
     1261 ggcttccaca actccgcgat ccacttccaa aagggcggat tccattaaac gggcaatata
     1321 aggtgccgta aatacgacaa gtggcataat aaccccttga atcccaatag tagtcccaac
     1381 aacaaaccgt gttacaggaa tcattaagaa taacaaaata ataaacggta atgaacgtaa
     1441 aatattaata acccagttta gaatactgta ggcaaccagg ttttctgatt gaccaccttt
     1501 acgcgttaat gttaaaaata cgccaagtgg taaaccaatc gcaagtgaaa tcacgagtgt
     1561 aatcccagtc atcgtaagcg tttctagaaa tccttgccaa agtatcgggc cccattcttc
     1621 aaaaaacaaa ctcatagtaa ctcgacctcc tcaacaacga ctccagattc tttcaaataa
     1681 gaaatagctt tactgtattc aacttcgtcc ccttttaaat gaacgagcag ttttccaagt
     1741 gttccgtttt tcaaatgatc aattccccca gctaaaatgc ttggaagaac gtcgaattta
     1801 cgtgatacaa gagcgagcgc aggctcatcc gcttcgtctc caataaaatg aagagaaacc
     1861 aatttcccag tcgcaacata tttttcaagc aaatcttgcg ggatatcgaa actagcttcc
     1921 gatccaacaa agcgcttggt tgtcgagtgt tttgcttttg taaaaatatc aagaaccgta
     1981 ccttgttcca ctaaatgacc attttccatt acagcaaccc ggtcacaaat acgttgaatg
     2041 acatcaagtt catgtgtaat taagaaaatc gtaatgccga gttccgcatt aattttaagt
     2101 aacagttgca aaattgcttc tgttgtttca gggtccaagg cgcttgttgc ttcatcgctt
     2161 aagagaattt ctggctcatg cgcaagagca cgagcaatcg ccacacgctg tttttgaccg
     2221 ccagaaagtt ggcttggata gttgtttcgt ttatcctcta agccaacaat tgacaagtat
     2281 ttatttacgc gcgtctcgat ttcgtctttt ggaacgcctt ctaattttaa tggtttggca
     2341 atgttatcat agacagttgc ggtttttagt aggttatatc cttggaaaat catgccgatt
     2401 ttccggcgag cgacacgaag ttctttgctt gatagggtag ataagttctt cccatcaatc
     2461 acaacttggc cggcatctgg acgttcaagc aggttgatgc aacgaacaag ggtacttttc
     2521 ccggcgccac tgtaaccaac gacaccgaaa atttctcctt tttctactgt aatagaaaca
     2581 tttttgacgg cttctacggt ttttccattt acgttaaatg attttgaaac ttgatgtaat
     2641 tcgatcaaaa taaaacaact ccctagaatg caggtactac agacccatta aattcttttt
     2701 caataaatgc ttttacttca gctgaatggt aatatttttc taatgttttt acgacttcat
     2761 cgtctttgtt ggcactacga acaacgaaaa cgtttggata tggattgtct tttgtaggtt
     2821 cgtggtaaat ggcatcttta ttaatagaaa gtccagcgcc cattgcaaag ttagtattga
     2881 tagctgcggc tgcaacttca tctaattgtg caggtatttg agaagcttca agttcaacga
     2941 tttcaaggtc aagcgggttt tcagcaatgt cttttttcgt tgctttttct tccacaccat
     3001 cttttaattt aataacgcca gcatcttcaa acagttttaa accacggtat tcgttacttg
     3061 gatcatttgg aacggcaatt ttgtcgcctt ttttaagatt tttcaagtct ttaatatcgt
     3121 tggagtaaat gcccattggg aatgctactg ttttaaaagc aacgtctaat ttgtagcctt
     3181 tatctttctt ttgttgctct aaaaatggaa ttgtttggta gttattcgca tccaaatcac
     3241 catcatttaa agctgtattt ggcgtgttat aatcatcaaa tgttttgatt ttgatttcaa
     3301 gaccgtcttt tttcgctaat ttttgaactt cttcagcgat ttgttggtga ggtcctgctg
     3361 ttgttccaat tgtaattttt tctgtgctta aggctttgtc gtcactgcct cctccacatg
     3421 ctgctaatcc taaaacaaga cttgatgcaa gtaaaattcc taaccctttt gttaattttc
     3481 tcatcttttt tcctccctag tatgttgtgt gattatccag atttattcat gaaaacaata
     3541 aaaaacttct ctatttagaa tagagaagtg gaaagtcgaa catatccagc tcctcttatc
     3601 taccaaaatg gaatacacca ttttgctgga attagcacct tcactttacg cttaaataaa
     3661 gttaggttgc cgggcttcat cgggccagtc cctctgccgc tctcgataag agaaaatatt
     3721 ttagaaaaac ctgttagtta aaaatatacg cacattacct taatttgtca atgctttttt
     3781 aagttttaaa aaaatcatac tggacaaata cttcagaaaa ctttactatt ttaatcaatg
     3841 aaacttgaaa aggacgggtg taaaatgaaa atttccaaac gcttgcaaaa tttaccagat
     3901 cagtttttct ctagccttgt tgaaaaagtt ggaaaaaagg tggcagaagg gcatgatgtc
     3961 attaatttag gacaaggaaa cccagaccag ccaacaccca aacatattgt ggaagcgatg
     4021 aaaacagctt cagaaaaacc acttaaccac aaatattctt tatttcgagg aaaacacgaa
     4081 ctaaaacaag ccgctgcgga tttttacgcg cgtgaatata atgtaacaat tgatccaaac
     4141 acggaagtag ctattttgtt tgggacaaaa acaggcttag tggagctgcc gatgtgtttg
     4201 atggatccag gtgatacgat gcttttacct gatccgggct atcctgatta tttgtcagga
     4261 gtagtgttag gtgaagttca atttgaaaaa atgccgctta ttgccgcaaa taatttttta
     4321 ccagatttca ctaaaattcc agaagacata gctgaaaaag ctgaattaat gtatttaaat
     4381 tatcctaata atccaactgg cgctgtggct acggcagatt tctttgaaga aacagtcgct
     4441 tttgccaaga atcataatat cgttgttgcg cacgatttcg catatggagg tattggcttt
     4501 gacggtaaaa aaccaattag ttttttagaa gcaaacggtg caaaagaagt tggaattgaa
     4561 ctttatacac tttcgaaaac atataatatg gctggctggc gcgttggttt tgcagttggg
     4621 aacagcgaag ttattgaagc tattaatctt attcaagatc atatgtatgt aagtcttttt
     4681 ccagggattc aagatgctgc aatcgaagct ttaacaggag atcagacttg tgtgggtgaa
     4741 ttaaccgctc gttatgaaag tcgcagggat gcctttattt ctgcttgtaa gaaaattggt
     4801 tgggaggcag ttgcgccggc gggttcgttc tttgcttgga tgccagtccc ggaaaatttt
     4861 acaagtagcg aatttgctga ttatctgcta gaagaggtca gtgttgccgt tgcggatggt
     4921 agtggctttg gggagtttgg tgaaggttac gtccgcgtag gtcttttaat ggatgaagag
     4981 cgcttggaag aagcagtaac gcgagtttcc aaattgcatt tgttcgataa agttacacag
     5041 cagtagccaa tttatccaat tttaagagaa aatcgcttgt aataattcag ataattaatg
     5101 ggatgtgtta taattggtta gtaagtctat tcttagcatg ttgttttatg aaggcaggcc
     5161 agaatttaaa atgtttagtg agatttttat gcattaaata aaaagtatct gtcccggtta
     5221 aagccggcga aatccaggaa tgagaggact gtaaaaaaat ggcagaaaag aaaattcttg
     5281 tagtagatga cgaaaaaccg attgcggata tagttaagtt taatctaaat aaagaaggct
     5341 ttgatgtata ttgcgcctat gatggcgatg aagcgttaga acttgtagaa gaagttcagc
     5401 cagatttaat tttactggat attatgcttc caggtcgtga tggtattgag gtatgtcgtg
     5461 aagtacgtaa aaaatatgat atgccaataa ttatggtaac agcgaaagat tcagagattg
     5521 acaaagttat cggactagaa cttggtgcag atgactacgt aacgaaacca tttagtaatc
     5581 gcgagttaat tgctcgagtg aaagccaatt tgcgccgtca cagccaagtc agctcaaatg
     5641 cagccgagga agaagaaaac agcgaactag aaattggttc tttgattatt catccggatg
     5701 catatgtggc ttctaaacgt ggagaaacaa tcgaactaac acatcgtgaa ttcgaattac
     5761 tacattattt agcaaaacat atgggacaag tcatgacacg tgaacattta cttcaaaccg
     5821 tttggggcta tgactacttc ggcgatgttc gtacggtgga tgttaccgtt cgtcgtttac
     5881 gtgagaaaat tgaagataac ccaagtcacc cagcatggtt agtaactaga cgcggagttg
     5941 gctattattt acgcaatcca gaacaagaat aaataacaag aagtggtcgc cgaagtgaaa
     6001 aaaattcggt gaccactttt tttgggtatt ttcgcttact taggtactat ttttataaat
     6061 aaatcgaccc aattaacagg aaaaacaata cgtctacacc ataacatatg gtatactaat
     6121 ttaaatatat taccccgaat aggagtagaa agacttatgc ataaaatgag attttttcag
     6181 tccgtacaat ttaagttagt tattatgtat ttgctactaa ttatcgttgc aatgcaagta
     6241 atcggcgcgt attttgtacg tgagctggaa gggcaactgg agaaaaattt tcaagattct
     6301 attacgaata gtattacgct tttagattat aacgctagag aagaaattat taaaaatagc
     6361 gacaactccg tcaagttaca aaatgatatt agagaactct tagtcgatta ttctcgcgca
     6421 agtagcaatt taatcgaagt aagaattgta gatgacaaag gaaaaattct cggcacatct
     6481 aatttaaata accaaggaat tgttggacaa aaaagcaacg atccacttgt aaaacgaaca
     6541 ttatcacttg gaacgacttc tgaggacaaa atctataaag acgaatcgaa taaaaataac
     6601 cgcgtttggg tgaacgtatc ctccatcaaa aataaaggcc aagtgatagg ggctatttat
     6661 cttgtcgccg atatcgaaag tgtctataaa caagttgatg atattacaaa cattttcatc
     6721 acagggactt tgattgcgat gattattaca gccgtccttg gaattctatt atcaagaacc
     6781 attactaaac caattatcga aatgaaacgt caagcttatg cgatggctcg cggcaactat
     6841 agccgcaaag ttaaagtata cggtgtcgat gaaattggtg aactggctga ttcttttaat
     6901 acactaacaa aacgagtcca agaagcccaa gcaatgactg aaggggagcg acgcaagtta
     6961 tcctctgtac tcgcatatat gactgatggc gtaattgcaa cagaccgtcg cgggaaagta
     7021 attctcatta atacgccagc agaaaaaatg cttcgcgtga aacatgaaag tgcgaatggg
     7081 cgctcgatta ttgatgtttt agacatcgga gacacgtacc aatttgaaga tttaatggaa
     7141 gtagatgggt cactaacaat ggaccgtagt actctcgaca aaccgtacgt gcttcgtgcc
     7201 aatttctcgg tcattcaaag ggaaacaggc tttaataatg gggttatcgc ggtacttcac
     7261 gatattaccg atcaagaaaa agtcgaccaa gaacgtcgcg atttcgtatc caatgtatca
     7321 catgaactaa gaaccccact taccagtatg catagctatt tagaagcatt aagcgacggc
     7381 gcgtgggaag ataaagaaat cgctccacgt ttccttgaag taacgcaaaa tgagaccgaa
     7441 cgaatgattc gtctcgttaa cgatctcctc aaactttcca gaatggatgg cggcagagaa
     7501 caactcgaaa aaagcttcgt gaactttacg gatttcttta accatattat tgaccgtttt
     7561 gaaatgatga aaaaagaaac aatcatgttc aaacgccata ttccaagaga gccagtcatc
     7621 atcgaaattg atgaagataa agtaatgcaa gtgcttgata atattatttc taacgccaat
     7681 aaatattcac cggatggtgg ccgtatttcc ttctatctga aaaaatttga agatgaaatt
     7741 gaagtaagca ttgccgatga aggtttaggc gtaccagacg aggatttagc aaatgtgttc
     7801 gaccgattct tccgtgtaga caaagcacgc tcgcgagaaa tgggaggaac agggttagga
     7861 ctcgctattg ctcgagaagt tatcgaagca catggtggtc gaatttgggc cgaacgtaat
     7921 aaaaccaaag gaaccataat taaatttacc ctgccataca gtgacttacc ggaggatgat
     7981 tgggaatgat gaaaaaaaca ggatttcgct catttatact aaccatttta gtcgtactca
     8041 gtattgtcct aagctacttt atttggaagg gacaacctga ttacgaagca attaacgtaa
     8101 aagaagtgga aaaaacaacc attgacaaga caatgacaac atcgcaagta ttcaaaccat
     8161 acaagctggc tgtaaatgca aatgaaaata attaccaaag tttagatgct gatttattaa
     8221 acgaactaat ggcacaaggt aaagccttta gtttctcgga agtagtatta gctagtaaaa
     8281 aaagtagtga agactatgag aaattaatcc ataaaaacgg aactatcgag attattttcc
     8341 ccaataatat tccgttctct atctttgctc aaatttttca agtagaaggg gaagggcttg
     8401 agtcagcgtt ctttaatcga attgtttttg atattaacaa aacggatact gggctacatt
     8461 cggtttattt cacaaatgac gatcaagaaa atatttacca aagttctttg caaaataaag
     8521 acattgataa aatcgaaaaa attgttaaaa agaacgaaag caagctgact caaaatgata
     8581 agctaatttc aaacaaacgc aatctttttc taagctctga aaaaacgaaa ctaaatcgca
     8641 aaaaatatat catcgattcg cttgaaatta atttattcac gtccgcacta ttccaagatt
     8701 ctggtactgt taaaagtgaa ggaaacacat acacagatgg ttcaagtgtc attgaaatgg
     8761 atacagataa taaagtatta gagtatgtaa atccatcaca agaacgtact aatccagaag
     8821 atctcagtag tgtcaaacga gctggactta ttcaagatag ttttaacttt gtgaacgacc
     8881 atgctggctg gactggcgac ggcgcttact atttcacagg ttatgccgcg gaaagtgcga
     8941 cgactaattt cagtttattc atcgataatt tacaagtata caatgagaat ggcatggcgg
     9001 atatttctgt aacagaagga cttgaagctg tttataaata catgagacca tttttccgct
     9061 tagatacaga tgttcccgga gagaaaaaag aagttacgtt accatcctct tattctgtct
     9121 atagtgctct tgcccaaaat cctaacgtca aagcagaaga aattgaagat attgttcctg
     9181 gctatcatat gactagaagc gaatcttcgg gcatgaatcg tcttgtaaca ttagagccga
     9241 cgtggttgta taagtatcat gacaaatggt tcatcttcca accagacgca gaaaaggcgg
     9301 gtgaataaaa atggattggc gtaaaacaca aatgattttt attgtgactc tcctcattct
     9361 taatgttttt ttagcggtaa tatttttcaa caagcagtta tcagatgacc cagatacact
     9421 cggaaatgaa acgctagaag aacgattaaa agcagataat atctctcatc ctgatttatc
     9481 gaccaaacct actagcggct ctattttcac tacagagcga gcagctttta caacaaaaga
     9541 tgtgagcgat cttacagggc aagccattac gcttaaagat aacaataaac aaatctattc
     9601 tgtcttacaa actcccgtaa aagctggcaa aaaaggtagt aacccagaat ttcaaaaatt
     9661 tatggaatca gatgtttatc gcggggaatc ctatcaattt tggaattatg acaaagatgc
     9721 tcggaccctc acttttaatc aattaattaa taataatatg gttttatttg atgaagcggg
     9781 ccaaattact ttttatttag atcaagatga ccgagtgatc tcatacgagc aaacttggat
     9841 gtctaagcaa gatgatttaa aagataaaac caatttaatg tccgcaacag atgcattaga
     9901 agcggtttat cagcacggag aattgaagca agacagcgac gtggtttctg caacatttgg
     9961 ctattacacg acagtacagc taccctctgg aaatgtatac ttccccgttt ggtgttttga
    10021 agtaaaacat tctggtgaaa ctaattatgt cctcgtaaat gccaaagacg aacaagtaat
    10081 taatcaatca gacaacaaat caaccaccga gccaggtaca gaattatcga gccgtcagaa
    10141 aaccaaataa aaaatgagtc aacctaatta tcatgaaaaa ttaggttggc tttttcaaac
    10201 gatagggcat gcaattttgc cgaattagcg ttacaatgaa agatatataa gcctttaggg
    10261 ggataaaaaa tgttcgcaaa taaaatttta acggaaaaag atacggatca aatccgattt
    10321 agtatattag ccagtggaag ctcagggaat gccacacttg tcgaaacagg agaccaaaaa
    10381 attctgatcg attgtggttt gagtggaaag aaaatggaag gattattcgc gcaagttggt
    10441 cgtgatatga acgatttaga cgcgattcta attactcatg aacattcaga tcatattaaa
    10501 ggtcttggtg tgcttgctcg gaaatacaaa ctccctattt atgctaacgc gaaaacgtgg
    10561 aaagcaatgg ataatatgat tggcgaagtg tcttcagatc aaaaattcca atttgatatg
    10621 gaaacagtaa aaacctttgg tagcatgcaa gtggaatcct ttggagtctc tcatgatgca
    10681 attgagccga tgttttacat atttcataaa gggaataaaa aatttgtaat gataacggac
    10741 actggttatg taagcgaccg aatgaaaggt catattgcgg gggctgatgc ttatcttttt
    10801 gaaagtaatc atgatgtaga aatgcttcga atgggacgct atccgtggaa tgtaaaacgc
    10861 agaattcttg gtgacgaggg acacgtgagc aatgaggacg ctgcaatagc aatgagcgaa
    10921 gtcattaccg atcaaacaaa acgaatttat ttgggacacc ttagtaaaga caacaatatg
    10981 aaagaacttg cgagaatgag cgtaacacaa acacttatgg cagaaggtat tgatgttggg
    11041 ggtaaactag aaatttttga cacagaccct gataatgcta catctatctt tactatttaa
    11101 gtttcaccgt ttttttaaag ctttttcatc gttttttcat atttggggtt tattatggaa
    11161 gtatataaat gcgaaatttg cagagaggaa ggaagacatg gacgagaaag aaaagaattt
    11221 aaatgaaaac agcgagaatg aaagcacgcc aaaaagagag gtcgaggata ctttacatac
    11281 accggagagc gcgcaaccag tccaagaaac tcctattgta gaaggcgtga ccccagaagg
    11341 ggagaaattt gccggagcga cagaagatgc agccgaggcg agttctacaa atgcattttt
    11401 tgaagaagca agtaataaag aaccagaacc tgctagaccg gctccagggc caagacgcgc
    11461 tggtacaact ggtggcgggg cagttccacc taatagagtg aataatggcg gaagtggtaa
    11521 cgggaatggt gaaccaccga aacgcggcaa acactttatc ggttactttt taacagcact
    11581 tattggtgtt attatcggag gacttattat tttctttgtc gcttgggata atggtgacaa
    11641 tgcagataca acttcaaact caaataataa agctaccaaa gtagaaaaag tttcagtaga
    11701 tacaacatca gatgtaacaa aagcagtaga caaagtacaa gatgcggtag tgagtgttct
    11761 aaattaccaa tcatcttcat cccttgatgg aacaacgact tctgaacaag aagcttcctc
    11821 aggatctggt gttatttata aaaaggcaaa tggaaaagcc tacatcgtaa caaataatca
    11881 cgttgttgct gatgcaaata aattagaagt aacttttaca aacggtaaaa aatccgaagc
    11941 aaaattacta gggacagacg aatggaacga tttagctgtt cttgaaattg atgataaaaa
    12001 tgttactaca gtcgctgcat tcggcgattc agattcatta aaacttggtg aaccagcaat
    12061 tgcaattggt agcccgctag gaacagaatt ttccggttct gtaacacaag gtattatttc
    12121 tggtctaaac cgtgcagtac cagttgatac aaatggcgac ggaacagaag actgggaagc
    12181 agatgttatc caaacagatg cagcaattaa ccctggtaac agtggtggag ctttaattaa
    12241 tattgaaggc caagtaattg gtattaactc aatgaaaatt tcgatggaaa atgtagaagg
    12301 tattagcttt gcaattccaa gtaacacagt agaaccaatc atcgaacaac tagaaacaaa
    12361 aggcgaagta gaacgtccat ctctaggtgt atccttgcgt gatgttgata ctattccaga
    12421 aacacaacaa aaaaatatct tgaaattacc tgatagcgta gattacggcg caatggtaca
    12481 acaagtagta tccggttctg cagcagacaa agcaggcttg aaacaatacg atgttattgt
    12541 tgaactaaac ggccaaaaag taacaaactc catgacatta cgcaaaattc tatacggtaa
    12601 cgacgtgaaa attggcgata aagtcaaagt gaaatactat cgtgacggta aagaaaaatc
    12661 cacagatatt aaattagaag cagcaaaaac aactacatga taacaaaaag ccattctctt
    12721 gaaaaagagg gtggcttttt ttctgtggaa aacttgtgga tagcgatttt tttcggatat
    12781 agatatggta gagaacaaga attctcctac taaatataga actggtttgt ggatatgtgg
    12841 ataacttctg tggataacct gtgtgtaagc agtgaatatc ttgtggaaaa gaacaatttt
    12901 gataatttaa tcaataaaca cagatttatt tttgaaaaaa acacattttt tgcgaaaata
    12961 taggtcaaaa aagaaaaatg tggatagaaa gccatttatc cacattttta ctttttataa
    13021 gctggatatg tgacaaggaa aataacttta catagagatt tgattcgcga gattgattgt
    13081 aggagaaggg gttccactgt ttggtggagt ttgagttttg aatagttagg cgacaatttc
    13141 acctgtggat aagctgtgga tagtgaaatt tggctatcat atatattgtg gagaatatac
    13201 gttcggacac aaaatagaga aggggcttgt ggatatgtgg ataatttttg gggataactt
    13261 gtgtataagg gcgggataac ctgtggaata actttttatg gaaagctgct cttattttat
    13321 tttgactagt gcaatgaggg atttttgatg tatgataaaa gtattaaaaa agataagggt
    13381 ggcataaatg aatattcaaa ttgtaacggt cgggaaatta aaagaaaaat atttagtgca
    13441 aggaatcgcc gaatatttaa aacgacttag cgcctttgcg aaagtgacga tcgttgaagt
    13501 tccggatgag aaagctccgg aagtgctgag tgatgccgaa atgaagcaag taaaagataa
    13561 agagggtgcg cggattttag caaagattcc ggacgatgcc catgttattg cgctggcgat
    13621 tgatgggaaa atgaagtcga gtgaagaatt tgcggcggat ttggataagc tggcgactta
    13681 tggtaagagt aaggtgacgt ttgtgattgg tggatcgctg ggacttagtg aggcggtgtt
    13741 gaagcggagt aatgagcgga tttcgtttgg gaggttaacg ctgccacacc agttgatgag
    13801 attggtgctg gtggagcagg tttaccgggc gtttcgaatt gttcgggggg agccttatca
    13861 taaatagcta gctggttgaa agggttgtaa tcaacaactt aacttttgaa tgctggttta
    13921 cttttttcga taagccattt ttcaccattt gaaattgtat gatctgcatg ataaattaat
    13981 gtttttcgaa gtgatgcgta ttctgtgggt aatgtttcat agtttagaaa atgatagttt
    14041 agtgcgatgc tttcaggaat aattccaata ccaagttcat tattgcagat ttcaacaagt
    14101 gtttcgggaa tattgatctc tgatatggaa acatttggga tattaatatc gttaatgaga
    14161 gcagccaggg cgcggtatga ataacattgt ttgctgaaga cgtataatcg ttcttccgct
    14221 aatatttttt ggactgattt tccagctgtg ttgcctgcga aaactagttt atcccatgag
    14281 agcgtttgtg agatgatttg gctatcttga aataaatttt ctttttcgag ttcagcgaca
    14341 tatgcgatgg ttagttctct gttagctatt tttggtatta attcacttgt acttccgcta
    14401 acgatagata attttttatt tggaaactgt tgatagaact ctttaatgat tgtgttaaat
    14461 tccataggca aagaagattg cgtaataccg attgagatcg tttcttcttc attattgata
    14521 atatcaatcg tttcctccca taataaaatc atttttttga attgttgata gattttttcg
    14581 ccctctttag ttggttccac accattcgag tgccggaaga aaagttgagt ttggaactgt
    14641 ttttcgatat tttttatttt attggacata ttagactgta aatgatgcag ttcattcgct
    14701 gctgcagaaa tactctttag ttcagctact ttattaaatg ctttcatgtt ttcaatatcc
    14761 ataattttct ccttttggta tcaaaaataa tgataccggc atatgatttt cgcatttcaa
    14821 atgatagcgc agatagatta tactttattt acaatataaa ttcaatttgg gggttatgtt
    14881 atgaatacaa ccattcaaca attggttaaa catgttt
//
LOCUS       DASDYO010000077        14786 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.077, whole genome shotgun sequence.
ACCESSION   DASDYO010000077 DASDYO010000000
VERSION     DASDYO010000077.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14786)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14786)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14786
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.077"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..305
                     /locus_tag="U0290_001913"
     CDS             <1..305
                     /locus_tag="U0290_001913"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2301952.1"
                     /translation="TNILLMIHDILNEMKPENQFLLYKLWQKTYLEPFQLFFERLENA
                     GELRDGVSAETAARYCLSTISPLFSGKGSFAQKQTTTEQIDELINLMMFGICKKEV"
     gene            385..2547
                     /locus_tag="U0290_001914"
     CDS             385..2547
                     /locus_tag="U0290_001914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MMPL family transporter"
                     /protein_id="HEM2301953.1"
                     /translation="MKDGFLSKIASGVGGKKGRFITLGIWIIAIIILQFFFPKAADYK
                     DDAAKDLPNSEPSVVAQKLIDDKFAGTDGVPALITWYRSTGLTTEDLVNIQKYSKELT
                     ENPVDYQKMAVPYDKMPPVALKQQVSKDGTTFIQTVIMKDSATSDQLTESFKQLESAA
                     KTTIGENPFAQKVSADDALVARTTGPAGISVDASGLFKDADVSLLIGTVLLVLVFLLV
                     IYRSPILALIPLIAVGFAYLVITPILGLLAKEGIITYGSQGLSIMTVLLFGAGTDYCL
                     FLISRFRSHLHTEKNRFQAFKEAFSGTAGAIALSGLTVMAALLLLLAAEYGSFHNFAV
                     PFSLAIFIMMISSLTLVPALLGIFGRVSFWPFVPRTLEMEETRAKKKGKTPKHHKENR
                     FWHKIGEMSAKHPVRILIITLIILIGCGIFTTQVKYTYDTLSTFPEDMPSREGFTLIS
                     DHFGAGMLAPMEVVVNSKESMKSSLENVDGVASVTGPERSKGYQKYTLILKDNPYSNE
                     AMDVVPKVRAAADKGNDVYIAGQTATQYDDRAVTEHDEKVIIPLVIALIAILLLCYLR
                     SITAMLYLVATVLLSFVGALGLGWVIIHYAMGVEAISGLIPLYAFVFIVALGEDYNIF
                     MISSIWKNSKKMPLRKAITEGVGQTGGVITSAGLILAGTFGVLTTLPIQLLVQFGLIT
                     AIGVLLDTFIVRPFLVPSITVLLGKWAFWPGKQHKMTK"
     gene            2626..3552
                     /locus_tag="U0290_001915"
     CDS             2626..3552
                     /locus_tag="U0290_001915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dipeptidase"
                     /protein_id="HEM2301954.1"
                     /translation="MRVIDTHCDALYKLQAGKGKYTFQDAEELDVNFERLIEAKMLLQ
                     GFAIFLDEDIPVEHKWKKAVEQVNIFKQHVLHKGGIIHHVKKWCDLENLPEDKIGAML
                     TLEGIEPIGRDLDKLTQLLDGGVLSVGLTWNNANLAADGIMEERGAGLTRFGKDIIHL
                     LNERKVFTDVSHLSVKAFWETLEQAEFVIASHSNAKAICSHPRNLDDEQIKAMIEHDA
                     MIHVVFYPLFTTNNGVADTEDVIRHIDHICELGGLKNIGFGSDFDGIPDHVKGLEHVG
                     KYQSFLETLEKHYTKEEIEGFASRNFLNHLPK"
     gene            3712..5055
                     /locus_tag="U0290_001916"
     CDS             3712..5055
                     /locus_tag="U0290_001916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA polymerase factor sigma-54"
                     /protein_id="HEM2301955.1"
                     /translation="MRLESNFVQKQQQKQSQKLNMTQQLSQSIAMLQFATADLVAFLE
                     DKALENPLIEVIPGSDFATDFSYSSRKSAGSSDDTDWLEQIADNKLTLADALKEQLHL
                     MDVTQTQKIIVLYLIESLNDNGYLQIDLKDVSAALLMDDSSVLEGLEILQSMEPAGVG
                     ARDARECILLQIERSPDAPYIAYDVIQKFFTEFAEKKWKKIAAEMDVSLQDIQEVSDY
                     IQTLNPKPGSEFESERVQYVVPDLILLQHEDEFAVSLAKQFLPQVRFQEAYYETMRAT
                     EEKDVAQFLREKAGEFDWIKKGIEQRENTLQRVGEAIVNHQKAYFLDNSAHLQPLTLK
                     EVAEELGVHESTVSRAVNGKYMETTNGVYELKRFFASGLQKKSSENENTGDISSTTIK
                     KLVQEFVAAEDKLKPLSDQKIVDMLAEKEIQVSRRAIAKYRLELNIPSSSKRKRF"
     gene            5496..6542
                     /locus_tag="U0290_001917"
     CDS             5496..6542
                     /locus_tag="U0290_001917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HEM2301956.1"
                     /translation="MSDLINIQKKLLPDVLMIMQKRYQILRSIYFSEPVGRRTLAGML
                     GMSERVLRGEVEFLKAQGLVEIASSGMTVTKEGLVVFRDLENVMNQLSGLHSMEEQLA
                     KKLQIKKCLVVQGDSDDTPWVREEMGRVAVEQLDMALTEKRNIVAVMGGSTMATVAEM
                     MTTDFAKGRELLFVPGRGGIGEDLDNQANTICDKMATKTNTKHRVLYVPEQLGEEAYR
                     SLLKEPAIQEGLRLVQSANAIILGIGDALAMAKRRHTGEDVLEKIIRRKAVGEAFGYY
                     FDEQGEVVHKVPTFGLQFEDLAQIPHIIAVAGGTSKAKAIKSYMKSAPKNTILITDEG
                     AAKSLLKGSNTLLK"
     gene            6575..7585
                     /gene="gap"
                     /locus_tag="U0290_001918"
     CDS             6575..7585
                     /gene="gap"
                     /locus_tag="U0290_001918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glyceraldehyde-3-phosphate dehydrogenase"
                     /protein_id="HEM2301957.1"
                     /translation="MTVKVGINGFGRIGRLAFRRIQNVEGIEVVAINDLTDAKMLAHL
                     LKYDTTQGRFDGEVEVHDGFFNVNGKEVKVLANRNPEELPWGDLGVDIVLECTGFFTA
                     QDKAELHIKAGAKKVVISAPATGDMKTIVYNVNHETLDGTETVISGASCTTNCLAPMA
                     KVLEDKFGVVEGLMTTIHAYTGDQNTLDAPHPKGDFRRARAAAENIIPNTTGAAKAIG
                     EVLPTLKGKLDGAAQRVPVPTGSLTELVTVLDKKVTVDEVNAAMEAASDPETFGYTSD
                     QVVSSDIKGMTFGSLFDETQTKVLTVGDQQLVKTVAWYDNEMSYTAQLVRTLEYFAKI
                     AK"
     gene            7720..8910
                     /locus_tag="U0290_001919"
     CDS             7720..8910
                     /locus_tag="U0290_001919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglycerate kinase"
                     /protein_id="HEM2301958.1"
                     /translation="MAKKVVTDLDLKDKKVLVRVDFNVPMKDGKITNDNRIVAALPTI
                     EYILEQNGKAILFSHLGKVKTEEDKEGKSLRPVAARLSELLGKEVKFVPTTRGPELEK
                     AIDELKDGEVLLFENTRFEDIDGKKESKNDPELGKYWASLGDVFVNDAFGTAHRAHAS
                     NVGIASNLESAAGFLMEKEIKFIGGVVDNPARPLVAILGGAKVSDKIGVIENLLTKAD
                     KVLVGGGMTFTFMAAQGQEIGKSLLEADKVELAKGLLEKAGDKLVLPVDAVVSKEFSN
                     DAPFHTVSADSIPADEMGLDIGQATIDLFTKELQGAKTVVWNGPMGVFELSNFAKGTI
                     GVCEAIANLTDATTIIGGGDSAAAAMDLGFADKFTHISTGGGASLEYLEGKELPGVAS
                     ISDK"
     gene            8956..9711
                     /locus_tag="U0290_001920"
     CDS             8956..9711
                     /locus_tag="U0290_001920"
                     /EC_number="5.3.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEM2301959.1"
                     /translation="MRKPIIAGNWKMNKTAAKAGQFAEDVKNNVPSSDAVESVVAAPA
                     LFLQELVRLTEGTNLRVAAQNCYFEDEGAFTGEISPFALADLGVSYVIIGHSERREYF
                     HETDEDINKKAHAIFKHGMTPIICCGETLDQREAGQTDTWVRGQIRAALAGLTEEQVI
                     KSVIAYEPIWAIGTGKSSTSADANETCAVIRAEVADAVSQKAADAVRIQYGGSVKPEN
                     IADYLAESDIDGALVGGASLEPASFLALLEAVK"
     gene            9713..11245
                     /locus_tag="U0290_001921"
     CDS             9713..11245
                     /locus_tag="U0290_001921"
                     /EC_number="5.4.2.12"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3-bisphosphoglycerate-independent
                     phosphoglycerate mutase"
                     /protein_id="HEM2301960.1"
                     /translation="MSKSPVAIIILDGFGKRAETVGNAVAQANKPNFDRYWANFPHGE
                     LKAAGLDVGLPEGQMGNSEVGHTNIGAGRIVYQSLTRIDKAIEEGEFQENKALNNAFT
                     HTKENNSDLHLFGLLSDGGVHSHINHLVALLETAKDKGVKNVYIHAFLDGRDVAPQSS
                     LEYLETLQKAISDLNYGAIATVSGRFYAMDRDKRWERVEKAYKAIVNAEGEKFEDPIE
                     LVKASYANDKNDEFVVPAIITKDGKPVATVKDNDAVIFFNFRPDRAIQLSNAFTDKEW
                     DHFDRGANHPKNIKFVTMTLYNPSIDAEVAFEPIEMKNVIGEVLSNEGLSQLRIAETE
                     KYPHVTFFMNGGRNEEFPGENRILINSPKVETYDLQPEMSAYEVTDALVEDIKNDKHD
                     AIILNFANPDMVGHSGMLEPTIKAIEAVDENLGRVVDLILEKGGSAIIFADHGNSETM
                     STPEGKPHTAHTTVPVPVIVTKKGVTLREGGRLADVAPTMLDLLGVKKPAEMTGESLI
                     QK"
     gene            11381..12673
                     /gene="eno"
                     /locus_tag="U0290_001922"
     CDS             11381..12673
                     /gene="eno"
                     /locus_tag="U0290_001922"
                     /EC_number="4.2.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphopyruvate hydratase"
                     /protein_id="HEM2301961.1"
                     /translation="MSIITEVYAREVLDSRGNPTVEVEVYTEAGAFGRALVPSGASTG
                     EYEAVELRDGDKARYLGKGVLKAVENVNDIIADKIIGFDVTDQIGIDKAMIELDGTPN
                     KGKLGANAILGVSLAAARAAADELGVHLYEYLGGVNGKVLPVPMMNILNGGEHADNNV
                     DVQEFMVMPVGAPNFKEALRMGAEILHALKAVLKGKGLNTGVGDEGGFAPNLKSNEEA
                     LETIMQAIKDAGYKPGEEVKLAMDAASSEFYNRETGKYELKGEGVTRTSEEMVTWYEE
                     MITKYPIISIEDGLDENDWDGFKLLTERIGDRVQLVGDDLFVTNTTKLKEGIEKGIAN
                     SILIKVNQIGTLTETLDAIEMAKRAGYTAVISHRSGETEDSTIADIAVATNAGQIKTG
                     APTRTDRVAKYNQLLRIEDNLADLAEYHGNETFYNLKK"
     gene            12776..12949
                     /locus_tag="U0290_001923"
     CDS             12776..12949
                     /locus_tag="U0290_001923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465977.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301962.1"
                     /translation="MLMKVKNSQASKVLETPKIKDAVVHEKSHPLAEKHSVQKKIINA
                     DMPQQQFHRRLMK"
     gene            13082..13801
                     /locus_tag="U0290_001924"
     CDS             13082..13801
                     /locus_tag="U0290_001924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465976.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2301963.1"
                     /translation="MIAEINGINLFYQIIGKGEPILLIHGNGQNHRSLKRMIDDLSTN
                     HQVIAVDSRAHGKSEAGNTPLDFEVMALDMLSLLDYLKIDKYKVIGYSDGGIVALVMG
                     KLQPNRQIASVVIGTNYHVNQIRFLPDLFCRVAYGAAFLLAPFSRFFERMKRQLALTI
                     YHPHMSEADLQKISAPLLAVVGEYDLISSKDTKKMVHSVQHGEMVIVRNGLHYLPRQK
                     PKQLLQLIHSFFSNLSAEIHK"
     gene            13984..14727
                     /locus_tag="U0290_001925"
     CDS             13984..14727
                     /locus_tag="U0290_001925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465975.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylesterase"
                     /protein_id="HEM2301964.1"
                     /translation="MSADRSFTLKAGNRAVLLLHGFAGTTEDVRELGEILAENGYTVH
                     APNFRGHGDEPAIFLKTTPEMWYEDAVAGYRQLEKDGYNEIAIVGVAMGGVFALKMAE
                     SFSPKAIVPLCANVNRKMRYIPIENYLTKQLKKQGIVEQEADQMLKNYLPEIDVMTEA
                     RATFYKNVARDIEKIHVPTMIGQGCQDEEIDADNANYIFKHIHTNDKQLCFYAGSGHD
                     IVNDCEKDILEEDLIYFLDDLVWLEEKVV"
BASE COUNT         4890 a         2684 c         3119 g         4093 t
ORIGIN      
        1 caaccaatat tctattaatg attcacgata ttcttaatga aatgaaacca gaaaatcaat
       61 ttttacttta taaattatgg caaaaaacct atttggaacc atttcaacta ttttttgagc
      121 gtctagaaaa tgctggcgaa ttgcgtgatg gtgtcagtgc tgagactgct gcgagatact
      181 gtttgtccac tattagccct cttttttctg ggaaaggcag ctttgcgcaa aagcaaacga
      241 ctacagaaca aattgatgaa ttaatcaact taatgatgtt tggtatatgt aaaaaagagg
      301 tataatttag cgtgcttctt tttttggtgt ttcacttatc gaatgataaa cgaaaaaaat
      361 aagcaaacta aagggggatt tataatgaaa gatggatttt taagtaaaat tgccagtggg
      421 gttggtggca agaaaggccg gtttataaca ttaggtattt ggattatcgc aattattatt
      481 ttacagtttt tctttccaaa agcagctgat tacaaagatg acgctgcgaa agatttaccg
      541 aattcagagc cttctgttgt cgcccaaaaa ctcattgacg acaaatttgc tggaacggac
      601 ggggtaccag cgcttatcac ttggtatcgt tcaactggtt taacaaccga agacttagtt
      661 aatattcaaa aatacagcaa agaattgacc gaaaacccgg tagactatca aaaaatggcg
      721 gttccttacg ataaaatgcc acccgtggcg ctcaaacaac aagtttctaa agacggaact
      781 acttttatcc aaaccgttat tatgaaagac agtgcgactt cagatcaact aacagagagc
      841 ttcaagcaac ttgaatcagc ggctaaaaca accattggag aaaatccatt tgcacagaaa
      901 gtatctgctg atgatgcgct tgttgctcgg acaactggac cggctggtat tagcgtggat
      961 gcgagtggac tatttaaaga tgcggacgtt tcgctgctaa tcggaacagt actacttgtt
     1021 ttagtctttt tactagtaat ttatcgttcg ccaattttag cgttaattcc tttgattgca
     1081 gtcggttttg cctacttagt aattacgccg attcttgggt tactcgcgaa agaaggtatt
     1141 atcacatatg gctcacaagg gctctcgata atgaccgtat tactatttgg cgccggaacg
     1201 gattattgtt tattcttaat atccagattc cgcagccatc tgcacacaga gaaaaacaga
     1261 ttccaagcat ttaaagaagc atttagcgga acagccggcg caattgcact tagtggattg
     1321 accgtaatgg ccgcactact tctattatta gcagcagaat atggttcatt ccacaatttc
     1381 gccgtaccat ttagtttagc gattttcatt atgatgattt cctcgctaac acttgtccca
     1441 gcacttctag gcatattcgg tcgtgtgtca ttctggccat ttgtcccaag aaccctagaa
     1501 atggaagaaa cacgcgcgaa gaaaaaaggc aaaacaccaa aacaccacaa agaaaaccgt
     1561 ttttggcata aaattggtga aatgtctgcg aaacatcctg tacgaatttt aattatcaca
     1621 ttgattattt taattggatg tgggattttt acaactcagg tgaaatacac gtatgacaca
     1681 ctttcaacgt tcccagaaga tatgccatct cgggaaggat ttaccttaat tagtgatcat
     1741 tttggtgccg gtatgcttgc gccaatggaa gtagtggtaa actccaaaga atcaatgaag
     1801 agttcgcttg aaaatgtgga tggagtggct tcagtgactg gtccagaacg aagcaaaggt
     1861 tatcaaaaat atacacttat tttaaaagat aacccttata gcaatgaagc aatggatgtc
     1921 gttccaaaag tacgtgccgc agccgacaaa ggaaatgacg tatatattgc gggacaaact
     1981 gcgacacaat atgatgatcg cgcggtgaca gagcacgatg aaaaagtgat tattccgctt
     2041 gttatcgctt tgattgcgat tttactttta tgctacttgc gctcgattac agcaatgctt
     2101 tacttagtcg ctacagttct cttgtccttc gttggagcgc tcggccttgg ttgggtcatc
     2161 attcattacg cgatgggagt agaggcgatt tctggcttaa ttcctctcta tgcctttgtt
     2221 ttcatcgtcg cactcgggga agattacaat atctttatga tttctagtat ttggaaaaac
     2281 agcaagaaaa tgccacttag aaaagcgatt acagaaggtg ttggccaaac tggcggggtt
     2341 atcacgtctg ctggtttaat tttagcagga actttcggag tcctaactac actgccaatt
     2401 cagctcttag tacaatttgg cttaattacg gcaattggtg tcctactcga taccttcatc
     2461 gtccgcccgt tcctagttcc atcaattact gtgctccttg gaaaatgggc gttctggcca
     2521 ggtaaacagc ataagatgac aaaatgaaaa cgactttgaa aaatctcttg tctattcctc
     2581 tgaaaagtat ataatagatg tatctaaaag gaggaacgac agaaaatgag agtaattgat
     2641 acccactgtg atgcgcttta caagctacag gctggaaaag gaaaatacac tttccaagat
     2701 gcagaagaac ttgatgtgaa ttttgaacgg cttatagagg ctaaaatgtt actacaagga
     2761 ttcgctattt ttcttgatga agatatccct gttgaacata aatggaagaa agcggttgaa
     2821 caagttaata tttttaaaca acacgtactg cacaaaggtg gaatcattca tcatgtgaaa
     2881 aaatggtgtg atttagaaaa tctacctgaa gataaaattg gcgcgatgtt gacgttagaa
     2941 ggcattgaac caattggacg tgatttagat aaattaacgc aattacttga tggtggcgta
     3001 ttatctgtcg gactaacgtg gaacaacgcc aatttggcag cggatggcat tatggaagaa
     3061 cgtggcgcag gactaacccg cttcggaaaa gacattatcc atcttttaaa tgaaagaaaa
     3121 gtattcacgg atgtttctca cttgagtgta aaagcttttt gggaaacgtt ggaacaggct
     3181 gaatttgtga ttgctagtca ttcaaatgcc aaagcaattt gttctcaccc tagaaactta
     3241 gatgatgaac aaatcaaagc gatgatcgag catgatgcga tgattcatgt agtcttctat
     3301 ccacttttca caacaaataa tggtgtggct gatacagagg atgttattcg tcatattgat
     3361 catatatgcg agcttggcgg attgaaaaac attggttttg gttcagattt tgatggtatc
     3421 ccagatcatg tcaaaggcct cgaacacgtc ggtaaatatc aaagcttcct tgaaacactc
     3481 gaaaaacact acactaaaga agagatagaa ggatttgcat cgcgcaactt cttaaaccat
     3541 ttaccaaaat aaacgaaagt ccaagcactg taagaagtgc ttggactttt tttgaaatag
     3601 aacaaagaga atctgctgta atttgaaaaa tggcatgtta taatgaagac aataaatgga
     3661 atttagtttg gtataaggta tatcagacga atttttaatg gaggttttaa tgtgcgttta
     3721 gaatctaatt tcgtccaaaa gcaacaacaa aagcagtcgc agaaattaaa tatgacgcaa
     3781 caattgtccc agtctattgc aatgcttcaa tttgcaacgg ctgatttagt ggcattttta
     3841 gaagataaag cactcgagaa cccattaatt gaagtgattc caggctcgga ttttgcaaca
     3901 gacttttctt acagtagtcg aaaaagcgct ggaagttctg atgatacaga ttggctagaa
     3961 caaatagctg acaataagct gacgttagcc gatgcgctaa aagaacagct acatttaatg
     4021 gatgtaacgc aaacacaaaa aattatcgtc ttatatttaa tagaaagctt aaatgacaat
     4081 ggttatttac aaatagattt gaaagatgtc agtgcggcgc ttttaatgga tgattctagt
     4141 gtgttagaag gtctagaaat cttgcaaagc atggagccag ctggcgttgg ggcaagagat
     4201 gcgcgtgaat gcattttact acagatcgaa cgctcgccgg atgctcctta tattgcctat
     4261 gacgttatcc aaaaattctt cacggaattt gcagagaaaa aatggaagaa aatcgctgca
     4321 gaaatggatg ttagcttgca agacattcaa gaagtttccg actacattca aaccttaaat
     4381 ccaaagccgg gttctgaatt tgagtctgaa cgcgttcaat atgttgtccc ggatttaatt
     4441 ttactccaac acgaagatga atttgctgtt tcactagcaa aacaatttct gccacaagtg
     4501 cgtttccaag aagcatacta cgaaacgatg cgagcaaccg aagaaaaaga cgtcgcccaa
     4561 tttctacgcg aaaaagccgg cgaatttgat tggataaaaa aaggcatcga acaacgcgaa
     4621 aacaccttgc aaagagttgg agaggcgatt gtcaatcatc agaaagctta tttcctagat
     4681 aattccgcgc atttacaacc attaacctta aaagaagtag cggaagagct tggtgtacat
     4741 gaatcaaccg tgagccgtgc ggtgaatgga aaatacatgg aaacaacgaa tggtgtgtac
     4801 gaattaaaac gcttctttgc atccggttta caaaagaaat cttccgagaa cgaaaacaca
     4861 ggtgatattt caagtacaac tatcaaaaag ctagtacaag aatttgtagc agcagaagat
     4921 aaattaaaac cactctccga tcaaaagata gtagatatgc tcgcagaaaa agaaattcaa
     4981 gtttcaagaa gagctatcgc aaagtatcgt ttagaattaa atattccttc ttcctctaaa
     5041 agaaaaagat tttaaaagac gttttttgcc tcacgagccg tgtgtgggac aaaaaacgtc
     5101 tttttaaaac aaaaaaataa ctaagagcat gtttcgtttt ttgaagaggt ggaaaacaac
     5161 tagtatagcc tatttagaag tttgcagttt aagatttaat tgtaaatttc aggtgaatat
     5221 ttcataaatg tcccacttaa cacttgaaga tttgtgccaa gactgttaga atagggaacg
     5281 tagggtagtt aaagaacata aaaaagattc accagcgtaa gcagaaagag aaggggtaaa
     5341 aatcacattg agagacactt tgttaacaag ctgaagtagc tagtttaata gtcttgaaag
     5401 ttgtaaaaac ctctatctct acttttttta gttctaacgg gacgtcagat gactaagtgg
     5461 gtcgttaagc gtccaaagat gaggagcaat taaaaatgtc agacttaatt aacattcaga
     5521 aaaagttatt gcccgacgtt ttgatgatta tgcaaaaacg ctaccaaatc ctacgctcga
     5581 tttatttttc tgaaccagtt gggagacgga cacttgccgg aatgctaggc atgagtgaac
     5641 gcgtcctgcg cggcgaagta gaatttttga aagcacaagg tttagtagaa attgcttctt
     5701 ccggaatgac cgttactaaa gaaggcttgg tcgtttttcg cgatttggaa aatgtcatga
     5761 atcagctttc agggttacat tcaatggaag aacaattagc gaagaaattg caaatcaaaa
     5821 aatgcttggt ggtgcaaggt gatagcgatg atactccatg ggtccgcgaa gaaatgggac
     5881 gtgtggcggt tgaacaatta gacatggcgc tcaccgaaaa aagaaacatc gtcgcagtta
     5941 tgggcggctc tacaatggct actgttgccg aaatgatgac aactgatttc gcaaaaggca
     6001 gagaactact tttcgttccc ggtcgtggag gtattggtga agaccttgac aatcaagcga
     6061 atacaatttg tgataagatg gcaacaaaga caaacacaaa acaccgcgtt ctctatgttc
     6121 cggagcaatt aggcgaagaa gcctatcgtt ctttactgaa agaaccggca attcaagaag
     6181 gcttacgatt agtacaatct gcaaatgcta ttattttagg cataggtgat gcgctcgcga
     6241 tggcgaaacg cagacatacc ggcgaagatg tacttgaaaa aatcatccgt cgtaaagctg
     6301 taggtgaagc atttggttat tattttgatg aacaaggcga ggttgtacat aaggtcccta
     6361 cattcggtct tcaattcgaa gacttagcgc aaatcccgca cattatcgct gttgcaggcg
     6421 gtacatcgaa agccaaagca atcaaatcgt atatgaaaag tgctccaaaa aatacgattt
     6481 taatcacgga tgaaggagca gcaaaatcgc ttttaaaagg gagtaatacc cttttgaaat
     6541 aaaaaaacac tattttcaag gaggaaattg acttatgaca gttaaagttg gtattaatgg
     6601 ttttggacgt atcggacgtc tagcattccg tcgtattcaa aatgtggaag gaattgaagt
     6661 tgttgcaatc aatgacttaa cagacgctaa aatgttagct cacctgttaa aatatgatac
     6721 aactcaaggc cgttttgacg gtgaagtaga agtacatgat ggtttcttca acgtaaacgg
     6781 taaagaagtt aaagtattag ctaaccgtaa cccagaagaa cttccatggg gtgacctagg
     6841 agtagacatc gttttagaat gtactggttt cttcacagcg caagacaaag ctgaattaca
     6901 cattaaagct ggcgctaaaa aagttgttat ctccgctcca gcaactggcg acatgaaaac
     6961 aatcgtttac aatgtaaacc atgaaacatt agacggaact gaaacagtta tctctggcgc
     7021 aagctgtact actaactgtt tagctcctat ggctaaagtt ttagaagaca aatttggtgt
     7081 tgttgaaggt ctaatgacta caattcacgc ttacactggt gaccaaaata cattagatgc
     7141 tccacatcca aaaggtgact tccgtcgtgc acgtgctgct gccgaaaata ttatccctaa
     7201 tacaactggt gctgctaaag ctatcggtga agtattacca acacttaaag gtaaattaga
     7261 cggagctgct caacgtgttc cagttccaac tggttccctt actgaattag taacagttct
     7321 tgacaaaaaa gttactgttg atgaagtaaa tgcagctatg gaagcagctt ctgatccaga
     7381 aacattcggt tacactagtg accaagttgt ttcttctgac atcaaaggta tgactttcgg
     7441 ttcattattt gacgaaactc aaacaaaagt tcttacagtt ggcgatcaac aattagttaa
     7501 aactgtagct tggtacgata acgaaatgag ctacactgct caattagtac gtactttaga
     7561 atactttgca aaaatcgcta aataattagc agattaattt tactgaagtg ctagtcacat
     7621 cagcaataac aagaataagc ggagacacta ttgtttccgc ttattttctg aaataacggg
     7681 ggcgacccca atcctttaaa attaatggag gaactctaaa tggctaaaaa agttgtaact
     7741 gatttagatt taaaagacaa aaaagtttta gttcgtgttg actttaacgt gccaatgaaa
     7801 gacggcaaaa tcactaacga caaccgtatt gttgctgcac ttccaacaat tgagtacatc
     7861 ttagaacaaa acggtaaagc aattctattt tctcaccttg gaaaagtaaa aacagaagaa
     7921 gataaagaag gaaaatctct tcgtccagta gccgctcgtt taagcgaatt acttggaaaa
     7981 gaagtgaaat tcgttccaac tactcgtggt ccagaacttg aaaaagcaat tgatgagtta
     8041 aaagacggcg aagtacttct ttttgaaaat acacgttttg aagatattga tggtaaaaaa
     8101 gaaagcaaaa atgatccaga acttggaaaa tactgggcta gccttggcga cgttttcgta
     8161 aatgacgctt tcggtactgc tcaccgtgcg cacgcgtcta acgttggaat cgcttctaac
     8221 ttagaatcag cggccggatt tttgatggaa aaagaaatta aattcatcgg cggtgtagtt
     8281 gataatccag cacgtccact agtagcaatc ctaggtggcg caaaagtttc tgacaaaatc
     8341 ggtgttatcg aaaacttact tacaaaagca gacaaagttc ttgtcggcgg cggaatgact
     8401 ttcactttca tggcagctca aggtcaagaa attggtaaat ctcttttaga agcagataaa
     8461 gttgaacttg ctaaaggctt acttgaaaaa gctggcgata aattagtatt gccagttgat
     8521 gcagttgtat ctaaagaatt cagtaacgat gctcctttcc atacagtgag tgcagatagc
     8581 attccagctg atgaaatggg actagatatt ggtcaagcta caattgactt atttacaaaa
     8641 gaacttcaag gcgctaaaac agttgtatgg aatggtccaa tgggcgtatt cgaacttagc
     8701 aactttgcta aaggtacaat tggcgtttgt gaagctattg caaacttaac ggatgcaaca
     8761 acaatcatcg gtggtgggga ttccgcagca gcagctatgg acttaggttt tgctgacaaa
     8821 ttcacacata tttccactgg tggcggtgca tcattagaat atcttgaagg taaagagctt
     8881 cctggcgttg cttctattag cgacaaataa gctgaaccaa aaataatttt taatatcgag
     8941 aggatgttta tccaaatgcg taaaccaatt attgctggta actggaaaat gaacaaaact
     9001 gctgcaaaag caggacaatt tgcagaagac gtaaaaaata acgtgccatc aagcgatgct
     9061 gttgaatcag tagttgctgc accggcgcta tttttacaag aattagttcg tcttactgaa
     9121 ggaactaatc ttcgcgtagc tgcacaaaac tgttattttg aagacgaagg tgctttcact
     9181 ggcgaaatta gcccgtttgc acttgctgat ttaggtgttt cttatgttat tatcggacac
     9241 tctgaacgtc gtgagtattt ccacgaaaca gacgaagata ttaacaaaaa agcacatgca
     9301 atcttcaaac acggcatgac accaatcatt tgctgtggtg aaacattaga tcaacgtgaa
     9361 gctggtcaaa cagatacttg ggtacgtggt caaatccgtg cagctcttgc tggattaacg
     9421 gaagaacaag taatcaaatc tgttattgct tatgaaccaa tttgggcaat cggtactggg
     9481 aaatcttcca caagtgctga tgcaaacgaa acttgtgcag ttattcgtgc agaagttgca
     9541 gacgctgtat ctcaaaaagc agcagacgca gttcgtattc aatacggcgg tagcgtaaaa
     9601 cctgaaaaca ttgctgatta tcttgcagag tccgacattg acggcgctct tgtaggtgga
     9661 gcaagcttag aaccagcatc gttcttagca ttattggagg cagtaaaata aaatgagtaa
     9721 atcacctgta gcaattatta tcctcgatgg ttttggtaaa cgtgcagaaa cagtaggtaa
     9781 tgctgtagct caagcaaaca aaccaaattt cgaccgttat tgggctaatt ttcctcacgg
     9841 ggaacttaaa gctgccggcc ttgatgttgg tcttccagaa ggtcaaatgg gtaactctga
     9901 agttggccat acaaacatcg gagctggacg tattgtctac caaagcttaa ctcgtattga
     9961 caaagctatt gaagaaggcg aattccaaga gaataaagcc ctaaacaatg ctttcactca
    10021 tacaaaagaa aacaactcgg acttacatct tttcggttta ctatcagacg gcggcgtgca
    10081 tagtcacatt aatcacctcg ttgcactttt agaaactgcg aaagataaag gcgtgaaaaa
    10141 cgtttatatc catgcattcc ttgatggacg tgacgtggca ccacaatcct cactagaata
    10201 tttagaaaca ctacaaaaag ctattagtga cttaaactat ggcgcgattg ctactgtttc
    10261 tggacgtttc tacgcgatgg atcgtgataa acgctgggaa cgtgttgaaa aagcatacaa
    10321 agcaatcgta aacgctgaag gtgaaaaatt tgaagatcca atcgaacttg tcaaagcttc
    10381 ttatgctaat gacaaaaatg atgaattcgt tgttccagct atcattacta aagatggcaa
    10441 acctgttgca acagttaaag acaacgatgc agttattttc ttcaatttcc gtcctgaccg
    10501 tgcgattcaa ctttctaatg cattcactga taaagaatgg gatcatttcg accgcggggc
    10561 taaccaccct aaaaacatca aattcgttac aatgactctt tacaacccaa gcattgatgc
    10621 tgaagttgct tttgagccaa ttgaaatgaa aaatgttatc ggcgaagtac tttctaatga
    10681 aggcttatcg caactgcgta tcgctgaaac agaaaaatat ccacatgtaa cattctttat
    10741 gaatggtgga cgaaatgaag aattccctgg tgaaaaccgg attctaatca attcgccaaa
    10801 agtagaaaca tacgatttgc aacctgaaat gagcgcatat gaagtaacag atgcacttgt
    10861 tgaagacatt aaaaacgaca aacacgatgc gatcatctta aacttcgcaa acccagatat
    10921 ggttggtcac tcaggtatgc ttgagccaac gattaaggca atcgaagcag tagatgaaaa
    10981 tcttggtcgt gtagtagacc ttattttaga aaaaggtgga tcagctatta tctttgcgga
    11041 ccatggtaac tctgaaacaa tgtctactcc agaaggaaaa ccgcacactg cgcacactac
    11101 tgttccagtt ccagtaattg taacgaaaaa aggtgtaacg cttcgtgaag gtggtcgtct
    11161 ggctgacgtt gcgccaacta tgcttgattt acttggcgtt aaaaaacctg ccgaaatgac
    11221 aggtgaaagt ttaattcaaa aataatttta gttattactt tagttttttt gcaaacagag
    11281 ctacaataaa tacgaattta aaaacggatg ggtctttgaa tatgaagtga attttttgtt
    11341 catttcattc aattaatccc aacaaaggag agaattataa atgtctatta ttactgaagt
    11401 ttatgctcgc gaagtcttag attcccgtgg taacccaact gttgaggttg aagtttatac
    11461 tgaagctggt gcgtttggtc gcgctttagt tccaagtggt gcttcaactg gtgaatacga
    11521 agctgtagaa ttacgcgatg gcgacaaagc tcgttacctt ggaaaaggtg ttttaaaagc
    11581 tgttgaaaac gtaaacgaca ttattgctga caaaattatc ggttttgacg taactgatca
    11641 aatcggaatt gacaaagcaa tgatcgaact tgatggtaca cctaacaaag gtaaattagg
    11701 tgctaacgct attcttggtg tttctttagc tgctgctcgt gctgctgctg acgaactagg
    11761 cgtacattta tatgaatatc ttggcggagt gaacggtaaa gttcttccag ttccaatgat
    11821 gaacatcctt aacggcggag aacatgctga taacaatgtc gacgttcaag aatttatggt
    11881 aatgcctgtt ggagctccaa actttaaaga agctctacgt atgggtgctg aaatcctaca
    11941 cgcacttaaa gctgtactta aaggtaaagg cttaaacact ggtgttggtg atgaaggtgg
    12001 attcgctcca aaccttaaat ccaatgaaga agctcttgaa acaatcatgc aagcaattaa
    12061 agatgctggt tacaaacctg gcgaagaagt taaacttgcg atggatgctg catcaagtga
    12121 gttctataac cgcgaaactg gtaaatacga acttaaaggt gaaggcgtaa ctcgtacttc
    12181 tgaagaaatg gtaacttggt atgaagaaat gattactaaa tacccaatca tctctattga
    12241 agatggccta gacgaaaacg actgggacgg attcaaacta cttacagaac gtattggtga
    12301 ccgcgttcaa ttagtaggtg acgatctatt tgtaactaac acaactaaac ttaaagaagg
    12361 tatcgaaaaa ggtatcgcta actccatcct aatcaaagtt aaccaaatcg gtactttgac
    12421 tgaaacattg gatgcaattg aaatggctaa acgcgctggc tacactgcag ttatctctca
    12481 ccgttctggt gaaacagaag attccacaat cgctgacatt gcagtagcta caaacgctgg
    12541 tcaaatcaaa actggtgcgc ctactcgtac tgaccgtgtt gcaaaatata accaattact
    12601 ccgcatcgaa gacaatttgg ctgatcttgc tgaataccat ggtaacgaaa ctttctacaa
    12661 cttaaaaaaa taagttgatt gaataaaacg ctaagctccg cgaaaagtaa cattttcgcg
    12721 gagttttttc tgttttaaaa atagcgagag gggtaatgat ttggaagagg aggtaatgct
    12781 gatgaaagta aaaaatagtc aggcctcaaa agtgctcgaa actccaaaaa tcaaagacgc
    12841 tgtggtgcat gaaaaaagcc accccttagc ggaaaaacat tctgtgcaaa agaaaatcat
    12901 taacgcagat atgccccaac aacagtttca ccgaagactt atgaaataaa cggtgcgcct
    12961 gattctagtt ttaaaagaat caggcgtatt ttaatgaaaa tggaagcttt tttataggaa
    13021 atcaagtata atcaggtgta aaataagggt agaaaatgtt ttcagcaagg agaaatgcta
    13081 tatgattgca gaaatcaatg gaattaactt gttttatcaa ataatcggta aaggcgaacc
    13141 aatcttgctt attcacggga atggtcaaaa tcatcgttct ttaaagcgga tgattgatga
    13201 cctctctact aatcatcaag taatcgccgt agatagccgc gcacacggga aaagtgaagc
    13261 gggaaataca ccgcttgatt ttgaagtaat ggcgctagat atgctttcgt tactcgatta
    13321 tttgaaaatt gataaatata aagttatcgg atatagcgac ggcggtattg ttgctctcgt
    13381 aatggggaaa ttgcaaccga accgtcaaat cgcatccgtt gttattggaa caaactatca
    13441 tgtaaatcaa atacgatttt taccagattt attttgtcgt gtcgcctacg gggctgcatt
    13501 tcttttagcg ccatttagtc gcttttttga gcggatgaaa cgacaacttg ctttaacgat
    13561 ttatcatcca catatgtcag aagcggattt gcaaaaaata agcgcgccac ttttagctgt
    13621 tgtgggtgaa tatgatttaa tatcttccaa agatacaaag aaaatggtgc attctgttca
    13681 acacggtgaa atggttattg taagaaatgg acttcattat ttaccaaggc aaaaaccgaa
    13741 acaattgtta caattaattc atagtttctt ttctaattta agcgcagaaa ttcacaaatg
    13801 aaacctccgg aaaagccttt ggtagcaacg cgtttgagct ttgtgaaaaa agtgtttgac
    13861 aagttccttg gatagcgtta atattggtct attggtcaga actcaaaagg tagcttattt
    13921 agttcagatg ggctacaata gagtggatta taaaagtgat gatattagga ggattgcgta
    13981 aaaatgagtg cggatcggag ctttacgtta aaagcgggaa atcgtgctgt tttgctcttg
    14041 catggctttg cagggactac agaagacgta agagaacttg gagaaattct agcagaaaat
    14101 ggatacacag tgcatgcacc aaacttcaga ggtcacgggg atgaacccgc tattttcttg
    14161 aaaacaacac cggaaatgtg gtatgaagat gcggtggctg gatatcgtca acttgaaaaa
    14221 gacggatata atgaaattgc aattgtcggt gtcgcaatgg gcggagtttt tgcgcttaaa
    14281 atggcagaat cgttttcacc aaaagcgatt gttccactat gcgccaacgt caaccgcaaa
    14341 atgcgctata tcccaatcga aaactattta actaaacaat taaagaaaca aggtatagta
    14401 gaacaagaag cagatcaaat gctaaaaaac taccttcctg aaatagacgt aatgacggaa
    14461 gcacgtgcta ctttctacaa aaacgtagcg cgagacattg aaaaaattca tgtaccaacc
    14521 atgattggcc aaggctgtca agatgaagaa atcgacgcag ataacgccaa ttatatcttt
    14581 aagcacattc atacaaatga taaacaattg tgtttctatg cagggtcagg gcatgacatc
    14641 gtgaacgact gtgagaaaga cattttagaa gaagacttaa tttacttctt agacgattta
    14701 gtttggctag aggaaaaagt tgtttaacta ttgtatagaa acaaaccttt acgtataata
    14761 ccaaatatgg taaaattaat cttagt
//
LOCUS       DASDYO010000078        14637 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.078, whole genome shotgun sequence.
ACCESSION   DASDYO010000078 DASDYO010000000
VERSION     DASDYO010000078.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14637)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14637)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14637
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.078"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            228..2399
                     /locus_tag="U0290_001926"
     CDS             228..2399
                     /locus_tag="U0290_001926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 3 C-terminal
                     domain-containing protein"
                     /protein_id="HEM2301965.1"
                     /translation="MKQEKVQDLVNQMTLDEKIAQCLQLSPFLFKGTNKNAELTGPLL
                     QEMKLTDAHTENAGSVLGSSSALDMIGIQEAYLKTNRLGIPLVFMADVIHGYKTVFPI
                     PLALGCSFDRETVRVMAEVSALEATADGHHVTFSPMLDLVRDPRWGRVMESTGEDPFL
                     NSELGKAMVDGYQGDASKLHENLEQMAACVKHFAAYGAAEAGLEYNTVNMSTRELYQN
                     YLPAYNAAIQAGAKLVMTAFNVVDGIPATMNKWLNRDVLRDEMGFDGVLISDWGAVAE
                     VINHGTARNPKEAAQFSMEAGVDLEMMTTCYIHELKGLIEEGQLSESLLDEAVLRMLT
                     LKNDLGLFEDPYRGLKNNDRTKDILTDDSRGKARAAGIESAVLLENKNRLLPLAKEAK
                     IALVGPLATSPDILGGWNVYGEEKDGINVETGLREVFETVEVVSTEYTELSEEDKVAV
                     KAAVENMDVVVLALGEKNEWGGEAGSLATIRLPEAQYELAKFVQTLGKPVVITLFNGR
                     PLEVKELAESSDALLELWFPGTEAGRVTADLLSGASNPSGKLSMSFPQTTGQIPVYYN
                     HLRTGRPQTPENKGERYVSHYLDIPNEPFYPFGYGKSYSEFELKTSSLPKELNLGESL
                     HVEVTIKNISDIAGKEVIQVYLQDVTASISRPVKELKAFEKVALQAGEEKTVRFELTS
                     EAFSFYNQQLEKVQEPGLHRVFVGTSSEDVDVFEVEVGGYV"
     gene            2396..5656
                     /locus_tag="U0290_001927"
     CDS             2396..5656
                     /locus_tag="U0290_001927"
                     /EC_number="2.4.1.333"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="1,2-beta-oligoglucan phosphorylase"
                     /protein_id="HEM2301966.1"
                     /translation="MTMLKEIKKADLSAAFYPSGELAWLKWKDIMLNQVIQNPLENRL
                     SQIYVRAHLGDKIEIYPLLSRDAEVGFNENGVEYRGVVGPFRYSVQMHFHTRGWFYDV
                     SVDGDLEFDFVYLQDLGLAEQAAVRTNEAYMSQYIDYHVTEGATGFTVQARQNQPQSE
                     RFPAVQIGALTKIVGYATDGFDIYGTNYKLTSELANLKEKSLPNRVYQYEFAQISLQT
                     ELFTNHGETSFYGYATENQPKASGAPIENLAELKSNISGQSYQTSTKATLNKHIGTPI
                     IGETISDNWLQENFPDRIQEEQQNGDLLSFFTPNYAHVVMREKEAELERPHGSILLDK
                     VDVLNPEATLSATTYMYGAFLSQLVAGNTNMNKWNSHARNPLNILQTSGLRIYIELDS
                     ELRLLGVPSVWETSTNYSTWYYQWNDDLITVKTTLTAESKEAFVTVHSEKGRSYKLVL
                     TNQVTMGTNEYDTTVKKEVKEGIVTYFPAEDSPILETYPALQFRVDGTYNELTDERYF
                     AKEYVGTAGLDVFVFEPSDKATFHVQAKLTDEFSEPTEDLEANNKVIRASYDELTAQF
                     HLNHQSTTAEKLNLTVYWYAHQMLVHYASPHGLEQYSGAAWGTRDVSQGPFEFFLATG
                     NKAVLRKLVLTIFSHQYQDTGDWPQWFMFDKYTSIQQEESHGDVIVWPLKIIGDYMEM
                     SGDTGILEEAIPFVDRESKTFTKEQGTLLEHIELAVETIEARFMKGTALSNYGDGDWD
                     DTLQPANAQLKKNMVSSWTVALTYQTFKRLAAFLPVGEKYETLANNVQADFAKYMTND
                     TDVIPGFLYLEEGKAPVWMIHPEDKDTNIKYRLIPLTRSVISELVDKKQASRNFEIIG
                     EHLLHPDGVRLMSEPAHYAGGVSTHFKRAEQAANFGREVGLQYVHAHIRYIEALAKIG
                     DKSAWHMLDVINPINIKEVVPNAALRQSNTYFSSSDAAFLDRYQAQNEFSRVKEGSIP
                     VKGGWRIYSSGPGIYLHQLISSVLGIRQTEDALIFDPILPEELDGLECHIELDNYPLD
                     LTFESADEGSIVVNGEKQPVENEANLYRTGALVLPKKNLTTKCSQITIKFSKNNRL"
     gene            5704..6669
                     /locus_tag="U0290_001928"
     CDS             5704..6669
                     /locus_tag="U0290_001928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2301967.1"
                     /translation="MVGIKDIAKKAGVSISTVSYALNGSPKVTEKTRKRIMTIANELN
                     YIPNMAARTLKTRETKIIGVYLTNYGGIFYGTLLEGLTQTLYKHGYELIACSGTKTHR
                     FLPEKMIDGAIILDANFPSSEIINYANRGHKLVVLDRELTHENVSQVLLDNKGGATLA
                     IDYLSTNFKGDFYVITGPEDSYDARVRLETAKQELARSGDKKVHIIEGDFSEESGEKA
                     AAIITENWKAPVSVFALNDNMAIGMYRYFAGTDLEIGKDVRIIGFDNTDISEYLVPRL
                     ATIEYSKYKWGAVAADKLVELLEGGKAENEIIYTTRISGPSVSNN"
     gene            6729..7712
                     /locus_tag="U0290_001929"
     CDS             6729..7712
                     /locus_tag="U0290_001929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2301968.1"
                     /translation="MKLGIMGTNWITDSFIEGAINSGEWNLTAVYSRTEEKARAFGEK
                     YGDLTYFTDIEEMGKSDALDAVYIASPNALHYQHAVSLLKNKKHVIVEKPIFSTVAEL
                     EHAHQIARENNVFLFEAARHIQEPNFKRLQENIEKVGTIHGATLAYMKYSSRYDQVLN
                     GEEPNIFSLKFSGGSIVDLGVYPLYSAITLFGEPIKATYFATKLPTGVDGLGPIILEY
                     PTFNITIIQGKNSQSFLPSEIYGQKGTLIVDPLTGIEKITFYDNATKEETELAGPVVA
                     NDMQFEAAEFARIIEQSDRDTYEYLADLSLKVLRVSNELRHQNDIWFDAEK"
     gene            7846..9174
                     /locus_tag="U0290_001930"
     CDS             7846..9174
                     /locus_tag="U0290_001930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM2301969.1"
                     /translation="MTESNIPSFWAEKWQEHGYETPTEIQSAMYQPIKDGADVLAVSP
                     TGTGKTVAYALPTLEKIEAIPKTQWLVLAPSHELVMQITEVIRSWLPSDELTVISLIG
                     GANVKRQIEKLKKKPQIIVASPGRALELIKQKKIKMHEIKTITLDECDQLLRQENFKS
                     TLEIVESAVRDRQLTLVSATKLENPDMFFAQTENTPVMLEVTAKPEELTNVEHLYMDV
                     ESRDKATLLRRISHIKDMRGLVFVKDKPRMEILLEKLHYDKVKAAGIHGEIRKEKRKK
                     YLDDFKKGTLTYLIVTDVAARGLDIEDLPYVIHYDLAASEKEYTHRSGRTGRMGKSGT
                     VITFANPREIRTLKQYLTIHNLKGKQVRFYQGKLLDGAVPENKIAKKASRLPKQVQKG
                     KKDDVKKPFRKDKPTETAGKRKDKPTNASKPTRNNKPNKFNKKPTNFKRS"
     gene            9308..11986
                     /locus_tag="U0290_001931"
     CDS             9308..11986
                     /locus_tag="U0290_001931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HEM2301970.1"
                     /translation="MSSRKEEVLQLLNEKEEKVSAADVAELLQMDRANASRYLNDLFK
                     EKRIDKLPGKPVFYQAIKKAERASQHAGNIQESAFGRLIGSEDSLKVSIQQAKAAILY
                     PPNGLHSLILGRTGTGKSLFAECMYQFAKESETIPADAPFVSFNCADYAQNPQLLFGH
                     IFGVIKGAYTGAEETREGLLKKADGGILFLDEIHRLPPEGQEMLFTFIDKGEFRPLGE
                     SANVHHAQVQIIGATTESPDNFLLETFTRRIPMTITLPSLAERNLEERYQLVEFFLNQ
                     EATRLHQSIRVHRKALIAFLLYHASANVGQLQRDLKLACAKAFLHYKTKTANYILIEQ
                     DDLPIHVQKGLLHLKDEPEKLNRLIDVNKAIFKFVDTSDEFVETEDVHDVYHAIQEKA
                     DQLMKEGKDQSELEEALYVDVDQYFHNYMVQLPTHQTAKEIIAPAVWELTEKVYAMAE
                     EKLNRKYNEKMKFAFSLHLQSTIERVREQKHIIHPDLNNIRKKYPKEFQVAIDLSALI
                     EQELSIEIPFDEIGFLTMFLTEEVVDTSLSQENQVEVIVMMHGRSTATSMVETVQELL
                     SIESGIALDMPLTVEVKAMYEKLKQMVIKLNPVKGVLILSDMGSLTSFGNMLTEELGI
                     RTKTVTMVSTPVVLEAMRKASLGRGLEDIYQSCEQLFENKYKAHVLRAKPVKNAVIFT
                     CFTGEGVAEQLRKVVAPIIDETKIEIIVLQFLHKEAFRERIDQLMEEYNILAIMGSVA
                     FEYRDIPFFSALEVLSEGGLGIVSRILNDEVPYEKLIASLEGNLQAVSSAEQLVYFLR
                     KVISELQLQLNVILESGVDIGMILHLAFLIERVKLGAVDREFPDLNEFAKNHMVEMQI
                     TQQMMENVEIEYDIVIPQSEIAYLTQMMLSNQVEEN"
     gene            12146..12454
                     /locus_tag="U0290_001932"
     CDS             12146..12454
                     /locus_tag="U0290_001932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2301971.1"
                     /translation="MNNIMLVCSAGMSTSLLVKKMTEAIEKQQVDAAVIAVAEADFDK
                     YKGNVDVVLLAPQVRFLEKNLKRVLDPLGIPVAIINGIDYGTMDGEKVLNDALAMIEK
                     "
     gene            12524..12826
                     /locus_tag="U0290_001933"
     CDS             12524..12826
                     /locus_tag="U0290_001933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2301972.1"
                     /translation="MELEQTIMQLIVHGGNAKSDAMLAIEAAKKGDFDAADEQIKSAE
                     AALLEAHHSQTSLIQGEARGEKAEVSLLLVHAQDHLMNAITFKDLAKEIVDLYRSK"
     gene            12848..13936
                     /locus_tag="U0290_001934"
     CDS             12848..13936
                     /locus_tag="U0290_001934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF871 domain-containing protein"
                     /protein_id="HEM2301973.1"
                     /translation="MRKLGISVFPQHVALEESLEYIETAAKYGFSRIFTCLISANDEA
                     EFAKLETICKRAKELGFDVIADVDPTVFESLNITYKELDRFKELGLAGLRLDLGFSGS
                     EEAAMSFDDTDLKIELNISNGTRYVENILSYQANVGNIIGCHNFYPRKYTGLSREHFL
                     RTSKQFKDLNLRTAAFISSNSGEFGPWFVVDGGLPTMEEHRGVDITVQAKDLWNTGLI
                     DDVIVGNMFASEDELRALSELNRNELQLAVEFLDGATDVEKEIVLTQKHFNRGDASEY
                     VLRSTMTRVNFKQFDFPAHDTNTIAKGDVTIDNDGYERYKGEMQVALQEMENSGNTNI
                     VARIVPEERYLLDTILPWQHFRLVEKKK"
     gene            complement(14028..14612)
                     /locus_tag="U0290_001935"
     CDS             complement(14028..14612)
                     /locus_tag="U0290_001935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003739154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2301974.1"
                     /translation="MNNYEKRTLKKKTAIIQAALSLFGEQGFSDVSIKDIAALADVSQ
                     VSIYNYFGSKEALVGECASIIMQDTITLAEEILASEGTFTQKLERALQLCNAEINLSL
                     SKFISQEASKDAQFITLLVNNINALKNEIYMKYIAIGKQEKIIDNRLSDQSIQLFIEA
                     INGLGFTVPEEELEEKQAEIVQLFLYGLIGKCKE"
BASE COUNT         4968 a         2614 c         3048 g         4007 t
ORIGIN      
        1 attttatttt tactttatag cgtctgaaca ttgtatatca atggttttgt ggatataaat
       61 tttttctgga taaactttta cgaaaacgag atagtataga agaaaaagaa aaaaaggagc
      121 gtttcaccat gtgaatgtcg tttttggttg actaaagaaa agaaagcgct tatactgttg
      181 ttatatttga atagaaacgt ttcgaaaaaa gtgttcagga ggttcctatg aaacaagaaa
      241 aagtacagga tttagtcaat caaatgacat tagatgaaaa aatcgctcaa tgtcttcaac
      301 tttccccttt tctttttaaa ggtacaaaca aaaatgcaga actaacaggg ccgcttcttc
      361 aagaaatgaa attgacggat gcgcatacgg aaaatgcggg ttcggtgctt ggatcaagct
      421 cggcgcttga tatgattggt attcaggaag cttatttaaa aacgaatcga ttaggaattc
      481 cgcttgtttt tatggcggat gtcatacacg ggtataaaac ggtatttcct attccgcttg
      541 cacttggttg ttcttttgac cgggagactg ttcgagtgat ggcagaagtt tcggcgctcg
      601 aagcaacggc agatgggcat catgtcactt tttcaccaat gcttgattta gtacgggacc
      661 ctcggtgggg acgtgtgatg gaatcaactg gtgaggatcc atttttaaat agtgaacttg
      721 gaaaggcaat ggtagatggt taccaaggcg atgcgagtaa actacatgaa aacttggagc
      781 aaatggcggc atgtgtcaaa cattttgcgg catacggggc tgcggaggct gggctggaat
      841 acaacacagt taatatgtct acgcgcgaac tttatcaaaa ttatttacca gcttataatg
      901 ccgcaataca agctggagct aaattagtca tgactgcttt taacgtggta gacgggattc
      961 cagcaacaat gaacaaatgg cttaaccgag atgttctacg agacgaaatg ggttttgacg
     1021 gtgtacttat ttctgactgg ggcgctgttg ccgaagtaat taatcacgga acagccagaa
     1081 atcctaaaga agccgcacag ttttcgatgg aagcaggcgt tgatttagaa atgatgacga
     1141 cttgttatat ccatgaatta aaaggtttaa ttgaagaagg ccaattatcc gaaagccttt
     1201 tagatgaagc agtacttcgg atgttaactt taaaaaatga tttagggcta tttgaagatc
     1261 cctatcgcgg attaaaaaat aacgaccgca caaaagatat tttaaccgat gatagccgcg
     1321 ggaaagctcg ggcagcaggt attgaatctg ctgtgttatt agaaaataaa aaccgattac
     1381 ttccactggc taaagaagca aaaattgcct tggttggtcc acttgcaacg tcgcctgata
     1441 ttctcggtgg ttggaatgta tacggtgaag aaaaagatgg catcaatgtt gaaacaggtt
     1501 tgcgtgaagt atttgaaacg gtcgaagtcg tttcaacgga gtacactgaa ttgtcggaag
     1561 aagacaaagt ggcagtgaaa gcggcagtag agaacatgga tgttgtcgtg cttgccctag
     1621 gtgaaaaaaa tgaatggggc ggggaagcag gaagtcttgc tactatacgc ttgccggaag
     1681 cacaatatga attagcgaaa ttcgtccaaa cattaggaaa accagttgtt attacattat
     1741 ttaatggtag accgctcgaa gtgaaagagt tagcagaatc tagtgatgct cttcttgaat
     1801 tatggttccc agggacagaa gcaggccgtg tcactgcaga tttattaagt ggtgcaagta
     1861 atccttcggg gaaattatcc atgtcattcc cgcaaacaac tggtcaaatt ccggtttatt
     1921 ataatcattt acgcactgga cgaccacaaa caccggaaaa taaaggcgaa cgctatgtgt
     1981 cgcattatct tgatattcca aatgaaccat tttatccatt tggttacgga aaaagctata
     2041 gcgaattcga gttaaaaaca agcagtcttc cgaaagaact aaatctaggt gaatcactac
     2101 atgtggaagt aaccattaaa aacattagtg atattgctgg aaaagaagta atccaagttt
     2161 atttacaaga tgtgacagcg agcatttcac gaccagtcaa agaattaaaa gcttttgaaa
     2221 aagtagcgct tcaagctggc gaagaaaaaa cagttagatt tgaattaaca agcgaggcat
     2281 tttcattcta taaccagcag cttgaaaaag tgcaggaacc gggacttcac cgagtttttg
     2341 ttgggactag tagtgaagat gtagacgttt ttgaagtgga agtgggtgga tatgtgtgac
     2401 aatgttaaaa gaaattaaaa aagcggattt atcagccgca ttttatccga gcggagagct
     2461 tgcttggtta aaatggaaag atattatgtt aaatcaagtg attcaaaatc cattagaaaa
     2521 ccgcttgtcg caaatatatg tacgcgcgca tttaggagat aaaatagaaa tttatccact
     2581 acttagcaga gatgcggaag ttggttttaa cgaaaatggc gtggagtatc gcggtgtagt
     2641 tggaccgttt cgttatagtg tgcaaatgca ttttcatacg cgcggttggt tttatgatgt
     2701 ctcagtggat ggggatcttg agtttgattt tgtttactta caagacttgg ggcttgcaga
     2761 acaagcagca gtgagaacaa atgaagctta tatgtcgcaa tatattgatt atcatgtgac
     2821 agaaggcgcg actggtttca cggttcaagc ccgccaaaat caaccacaaa gtgagcgttt
     2881 cccagcagtt caaattggag cattaacgaa aattgttggg tatgcaacag atggttttga
     2941 tatttatgga acaaattata aactgactag cgaactagcg aaccttaagg aaaaatcatt
     3001 gccaaaccga gtctaccaat atgaattcgc tcaaatatcc ttacaaacag agctatttac
     3061 taatcacggt gaaacaagct tttacgggta tgcaacagaa aatcaaccaa aagcatctgg
     3121 agcaccaatc gaaaatttag cggaactaaa aagtaatatt tcagggcaat cttaccaaac
     3181 aagtactaaa gctacactaa acaaacacat aggaacaccg attatcggtg aaacaatttc
     3241 tgacaactgg cttcaagaga acttcccaga ccgaattcaa gaagagcaac aaaacggcga
     3301 tctactttcc tttttcacac caaattatgc ccatgttgtg atgcgtgaaa aagaagcaga
     3361 attagaacgc ccgcatggca gtattttgct tgataaagtg gatgttttaa atccagaagc
     3421 gacactttcg gcaacaacgt acatgtatgg ggcattttta tcacaattag ttgctggaaa
     3481 tacgaatatg aacaaatgga atagccatgc gcgtaatccg cttaatattc ttcaaacaag
     3541 tggattaaga atttatatcg aattagattc cgaacttcga ctactcggtg tgccgtctgt
     3601 ctgggaaact agtacaaatt actcgacttg gtattatcag tggaatgacg acctaattac
     3661 ggtaaaaacc acattaacag ctgaaagtaa agaggcattc gtcactgttc attcggaaaa
     3721 aggtcgctca tataaattag tcttaacaaa tcaagtaact atggggacaa atgaatacga
     3781 tactaccgtg aaaaaagaag ttaaagaagg aatcgtcact tatttccctg cagaagactc
     3841 gccgatttta gaaacctatc cggcgcttca attccgcgta gatggaactt ataacgaact
     3901 gactgacgaa cgttattttg caaaagaata tgtgggaaca gcaggtttgg atgtgtttgt
     3961 ttttgaacca agtgataaag cgactttcca cgttcaagca aaactcactg atgaattttc
     4021 tgaaccaaca gaggatttag aagcaaataa caaagtaatt cgcgctagct atgacgaatt
     4081 aactgcgcag ttccatttaa atcatcaaag tacaacagcg gagaaactga acttaacggt
     4141 ttattggtac gcgcaccaaa tgttagttca ctatgcttca ccacatgggt tagaacagta
     4201 cagcggggcg gcctggggta cgcgtgatgt gagccaaggt ccatttgaat ttttccttgc
     4261 aacaggcaat aaagctgttt tacgtaagct agtgttgacg attttttctc atcaatatca
     4321 agatactggt gattggccac aatggtttat gtttgataaa tatacatcga ttcagcaaga
     4381 agaaagccat ggcgatgtta ttgtttggcc tctgaaaatt attggtgatt acatggaaat
     4441 gagcggggat acagggattt tagaagaagc tattcctttt gttgatcgcg aatcgaaaac
     4501 ctttacgaaa gagcaaggaa ctcttcttga acacatcgaa cttgcagtag aaacgattga
     4561 agcccgcttt atgaaaggaa cggctctttc taattacggc gatggtgact gggatgacac
     4621 acttcaacca gctaatgccc agctgaagaa aaacatggtg tccagctgga cggtcgcgct
     4681 aacatatcaa acatttaaac gtttagctgc atttttgcca gtaggtgaga aatacgaaac
     4741 attagcaaac aatgttcaag cggactttgc gaaatatatg acaaatgata ctgatgttat
     4801 tccaggtttc ctatatttag aagaaggaaa agcacctgta tggatgattc acccagaaga
     4861 caaagatacg aatattaaat atcgcttaat accactgacg agaagtgtaa tttctgaatt
     4921 agtcgataaa aagcaagcca gtcgcaattt tgaaattatt ggtgagcatc tacttcatcc
     4981 tgatggcgta agattaatga gtgagccagc gcattatgct ggtggtgtaa gtactcattt
     5041 taaacgggca gagcaagcag ccaattttgg tcgagaagtc ggtttgcaat atgtgcacgc
     5101 gcatattcgt tatattgaag ctttagcaaa aattggcgat aaatccgctt ggcatatgct
     5161 ggatgttatt aatccaatca acataaaaga agttgtccca aatgcggcac ttcgtcaaag
     5221 taatacttat ttcagtagtt ctgatgcagc gtttttagat cgctatcagg cgcaaaatga
     5281 gtttagtcgt gtaaaagaag gtagtattcc tgtgaaaggc ggctggcgga tttattctag
     5341 tggcccagga atctatttac atcaattaat aagttctgtt cttggtattc gccaaacgga
     5401 agatgcgctt atttttgatc caattttacc tgaagaatta gatggattag aatgtcatat
     5461 tgaactagat aattatccgc ttgatcttac tttcgaaagt gcggatgagg gttctattgt
     5521 cgtgaatggt gaaaaacaac cagttgaaaa tgaagcgaat ttgtaccgaa ctggcgcact
     5581 cgttttaccg aaaaagaatt taacgacaaa atgttcacaa atcacgatta aattttcaaa
     5641 aaataaccgt ctctaaggtt gttttgtgta taataaaaga aaacagaaaa ggatgcgatt
     5701 cacgtggtag gaattaaaga tatcgcgaaa aaggcagggg tttccatttc aacagtatcc
     5761 tacgcgctta atggcagccc gaaagtgacc gaaaaaacgc gaaaacgaat tatgaccatc
     5821 gcaaatgaat tgaattatat tcccaatatg gcagcacgaa cgttaaaaac aagagaaaca
     5881 aaaattatcg gcgtctattt aacgaattac ggcgggattt tttacgggac tttactggaa
     5941 ggtttaacgc aaacgctata taaacatgga tatgaactca tcgcttgcag tggcacgaaa
     6001 acacaccgat ttttacccga gaaaatgatt gatggcgcta ttattttaga tgcgaatttc
     6061 ccgtctagcg aaatcattaa ttatgctaat cgtggtcata aattagtggt gcttgaccgc
     6121 gaacttaccc atgagaacgt gagccaagtc cttctagata ataaaggcgg cgcaacgcta
     6181 gcaattgatt atttatctac taattttaaa ggtgatttct atgtcattac cggtccagaa
     6241 gattcttatg atgcaagagt caggctcgaa accgcgaaac aagaactcgc tcggtcaggt
     6301 gacaaaaagg tgcatattat tgaaggagac ttttccgaag aaagtggcga aaaagcagca
     6361 gccattatca cggaaaactg gaaggcgcct gtttctgtat ttgccctaaa tgataacatg
     6421 gctattggga tgtatcgtta ttttgcaggg acagatttgg aaatcggcaa agacgtacga
     6481 attattggct ttgataatac ggatataagt gagtatttgg ttccacgtct tgctactatc
     6541 gaatactcga agtacaaatg gggcgcagtt gccgcagata aactagtgga actccttgaa
     6601 ggtggaaaag ctgaaaacga aataatctat actactagaa tcagtgggcc atctgtttca
     6661 aacaattagt acgctttttt ccttatttta aggtatactt aagataaaat gaagggagct
     6721 gttggctaat gaaacttgga attatgggaa cgaactggat tacggattct tttattgaag
     6781 gtgctattaa ttcaggtgaa tggaatctta ctgcggtata ttcgcgcaca gaagaaaaag
     6841 cacgcgcatt tggagaaaaa tatggggact tgacttattt cacggatata gaagaaatgg
     6901 gcaaatcaga tgcacttgat gcggtctaca ttgcttctcc taatgcgctc cattatcaac
     6961 atgcggttag cttactgaaa aataaaaaac atgttatcgt agaaaaaccg attttttcta
     7021 ccgtagccga attagagcat gcgcatcaaa ttgctcgcga aaacaatgtc tttttatttg
     7081 aagcagcgcg ccacattcaa gagccaaact tcaaacgcct acaagaaaac atcgaaaaag
     7141 taggtactat tcacggggca acactagcgt acatgaagta ttcttccaga tacgatcaag
     7201 ttttaaacgg tgaagaacca aacatcttct ccttgaaatt ttctggcgga tccatcgttg
     7261 acttaggtgt ctatccatta tattcagcga ttacactatt cggtgaaccc ataaaagcaa
     7321 cttattttgc cactaaatta ccaactggtg tagacggact tggaccaata attctcgaat
     7381 acccaacatt caatattact atcattcaag ggaaaaactc acagtccttc ctgccaagcg
     7441 aaatttatgg tcaaaaagga acactaattg tcgatccact tactggaatt gaaaagatta
     7501 ctttttacga caacgcaaca aaagaagaaa cagaacttgc tggtccagtt gtagccaatg
     7561 atatgcaatt tgaagcagca gagtttgcta gaattatcga acaaagcgac cgagatacat
     7621 atgaatactt agcagaccta agcttgaaag tattacgtgt ctccaacgaa cttcgtcacc
     7681 aaaatgacat ttggtttgac gcagaaaaat aattttgaag agctaggaaa aggctttcgg
     7741 gctgttttct agctcttttt ctgcgcaatg taaattctaa ataaaagtgc agacttgcag
     7801 taagcatggt atgatacaga gaagaactaa taaaggagtc gggtcatgac agaatcaaat
     7861 atcccaagct tttgggcgga aaaatggcaa gaacatggtt atgaaacgcc aacagaaatt
     7921 caaagcgcaa tgtaccaacc aatcaaagac ggtgcagatg tacttgcagt atcaccaact
     7981 ggaacgggga aaacggtggc ttatgcactg ccaacccttg aaaaaataga ggcaattcca
     8041 aaaacacaat ggcttgtttt agcgccatca catgaattag ttatgcaaat cacggaagta
     8101 attcgttcgt ggttgccaag tgatgaactc acagtaatct ctttaatcgg aggagccaat
     8161 gtcaaacgcc aaatcgaaaa attaaagaaa aaaccacaaa ttatcgtagc ctctccaggg
     8221 cgtgcacttg aactaatcaa acaaaagaaa attaaaatgc atgaaattaa aacgattacg
     8281 ttggacgaat gcgaccaatt acttcgccaa gaaaatttta aaagcacact tgagattgtt
     8341 gaaagtgctg ttcgcgatcg ccaattgaca cttgtatctg cgacaaaatt agaaaatccg
     8401 gacatgtttt ttgcacaaac agaaaacaca ccagtaatgc tagaggtaac agcaaaacca
     8461 gaagaattaa cgaatgtgga acacctatac atggatgtgg aatcacgtga taaagctact
     8521 ttactgcgcc gtatttcgca tattaaagac atgcgcggct tagttttcgt aaaagacaaa
     8581 ccacgaatgg aaattttact agaaaaactt cattacgata aagtaaaagc agctggaatt
     8641 cacggcgaaa ttcgcaaaga aaaacgcaaa aaatatctgg acgactttaa aaaaggcacg
     8701 ttgacttatt taatcgtgac agatgtagcg gctcgtgggc tagacataga agatttacct
     8761 tacgtgattc actatgactt agcagcaagt gaaaaagagt acacgcaccg ttctggacgg
     8821 actggacgaa tgggtaaatc aggtacggtt attactttcg ctaacccacg tgaaataaga
     8881 acattaaaac aatatttaac tatccacaac ttaaaaggga agcaggttcg cttttatcaa
     8941 gggaagcttc ttgacggcgc tgttccagaa aacaaaattg ccaaaaaagc atctagacta
     9001 ccaaaacaag ttcaaaaagg taaaaaagat gacgtgaaga aaccattccg taaagacaaa
     9061 ccaacggaaa ctgctggaaa acgtaaagat aaaccaacta acgcgtctaa accgacacgt
     9121 aataataaac caaataaatt taacaaaaaa ccaactaatt tcaaaagatc ttaagatgcg
     9181 ttgaatgttt ttctctcttg atagatagga aagcattcgc gcttttttta gttaattttt
     9241 atcgttgcga ggatgctgtt taaaaaggta taatggaaac atagagtttc aaaaaggagt
     9301 agagtagatg tctagtagaa aagaagaagt cctccaactt ctaaacgaaa aagaagaaaa
     9361 agtatctgct gcagatgtcg cagaattgct tcaaatggac agagcaaacg ctagtcgtta
     9421 tctaaatgat ctttttaaag agaaaagaat agacaaactt cctgggaaac cggtatttta
     9481 tcaagccatt aaaaaagcgg aaagagctag ccaacatgcg ggaaatatac aagagtctgc
     9541 ttttggaaga ttgataggtt cagaagatag tttaaaagta agtattcaac aagccaaagc
     9601 cgccattcta tacccgccaa acgggctgca cagcttaatt ctaggacgga cgggtacagg
     9661 gaaatcactc tttgctgaat gtatgtatca atttgcgaaa gaatcggaaa ctatcccggc
     9721 cgatgcgccg tttgtttcgt ttaactgtgc cgactatgca caaaatccac aacttttatt
     9781 tggtcacatt tttggggtaa ttaaaggagc atatacaggg gcagaagaaa cgcgcgaagg
     9841 tttgctaaaa aaagcagatg gcgggatttt attccttgat gaaatccacc gcttgcctcc
     9901 agaaggtcaa gaaatgctct ttacttttat tgataaaggg gaatttcgtc cactaggtga
     9961 aagcgcgaat gtccaccatg cacaagtcca aattattgga gcgacaacag aatcaccaga
    10021 taatttttta ttagaaacat tcacaagacg tattccgatg acaattacct taccatccct
    10081 tgcagaaaga aatctggaag agcgttatca attagtggag tttttcttga accaagaagc
    10141 tacaagactt caccaatcca tacgtgtaca cagaaaagcg ctgattgctt ttttacttta
    10201 tcatgcaagt gcgaacgtcg gtcaattgca aagagactta aaactagcct gtgccaaagc
    10261 atttttacat tataaaacca aaacggctaa ttatatatta atcgaacaag atgacttgcc
    10321 tatccacgtt caaaaaggtt tactccactt aaaagacgaa ccagaaaaat taaatcgttt
    10381 gattgacgtg aacaaagcca tttttaaatt tgttgatacg agtgatgaat ttgttgaaac
    10441 agaagatgtt catgatgttt accatgccat ccaagaaaaa gcagatcaat taatgaaaga
    10501 agggaaggac caaagcgagt tagaagaagc actttatgtt gatgtagatc aatatttcca
    10561 caactacatg gtccagttac caacccacca aactgccaaa gaaattattg cgcctgctgt
    10621 ttgggaatta acagaaaaag tatatgccat ggcagaagaa aaactaaatc gcaaatacaa
    10681 cgaaaaaatg aaatttgctt tttctttaca tttacaaagt accatcgaac gagtacggga
    10741 acaaaagcat atcattcatc ctgatttaaa taatattcgc aaaaaatatc caaaagagtt
    10801 ccaagtagct attgatttat ccgcactgat tgaacaagaa ttaagcattg aaattccttt
    10861 tgacgaaatt gggtttttaa cgatgttcct gacagaggaa gtagtagata cgtcactttc
    10921 tcaagaaaat caagtcgaag ttattgtgat gatgcatggc cgttcaactg ctacgagtat
    10981 ggtggagacg gtacaggaat tactgagcat tgaaagcggg attgctcttg atatgccgct
    11041 cactgttgaa gtaaaagcga tgtatgaaaa attaaaacaa atggtcatta agttaaatcc
    11101 tgtcaaaggc gttctaatcc tttctgatat gggttccctc acttctttcg gcaacatgct
    11161 gaccgaagaa ctgggaatcc gtacaaaaac cgttacgatg gtaagtacac cagttgtact
    11221 ggaagcgatg cggaaagctt cacttggtcg tggtttagaa gatatttatc aaagctgtga
    11281 gcaattattt gaaaataaat ataaagcgca tgtcttacgc gctaaacctg tgaaaaatgc
    11341 ggttatcttc acttgtttta ctggagaagg agtagccgaa cagttgcgta aagtcgtagc
    11401 accaattatt gatgaaacaa aaattgaaat tattgtatta caattcttgc ataaagaagc
    11461 ttttcgggag cgaattgatc aactcatgga agaatataat attctagcca tcatgggatc
    11521 agtagccttt gaatatcgcg atatcccatt ctttagcgca ctggaagttc tatcagaagg
    11581 tgggttaggg attgtttcta gaatattaaa tgatgaagta ccttacgaaa aattaatcgc
    11641 ttcattagaa ggaaatttac aagcagtaag ctctgctgaa caactggttt actttttacg
    11701 aaaagtaatt tcagaattgc aattgcaact taatgttata cttgagtcag gtgtggacat
    11761 tggtatgatt ctacacttag ctttcctcat cgaacgcgtg aaattaggcg ctgtcgaccg
    11821 ggaattccca gacttaaatg aatttgccaa aaatcatatg gtggaaatgc aaattacaca
    11881 acaaatgatg gaaaacgtag aaattgagta tgatatcgta ataccgcaat cagaaatcgc
    11941 atatttaaca cagatgatgc tctcaaacca ggtggaagaa aattaagaaa aaggaatctg
    12001 ccaagtgtgt attgtcttac acacttggct tttttacttg tgtaagcgaa aaactttgta
    12061 ggcaagcaac aaattagaag aaaagttggc acatatcttg catattatat atacgtgcag
    12121 cttttcaaac taggaggtta agttaatgaa taacatcatg ttagtttgtt cggccggtat
    12181 gtccacaagt ctgctcgtaa aaaaaatgac agaagctatc gaaaaacaac aagtggatgc
    12241 tgctgtaata gcagttgcag aagctgattt cgacaagtat aaaggcaacg tagatgttgt
    12301 tttactcgca ccacaagttc ggtttttaga gaagaatttg aagcgagtac tggatccatt
    12361 aggtattcca gttgcgatca ttaatggaat tgactatgga acaatggacg gcgaaaaagt
    12421 gctaaatgat gcactagcaa tgattgagaa ataatctcga gttcgagact gcttgaagag
    12481 gaattaaaca caagttcgat aaatgaaaaa ggatgtgtaa acaatggaat tagaacaaac
    12541 aattatgcaa ttaatcgtac acgggggaaa cgctaaaagt gacgcaatgc tagcaatcga
    12601 agcggcaaaa aaaggggatt ttgacgcggc agatgagcaa atcaaaagtg cagaagcagc
    12661 actacttgaa gcgcatcatt cacaaacttc attaattcaa ggggaagcac gcggcgaaaa
    12721 agcagaagta tctttactac tagttcacgc acaagatcac ttaatgaatg ctattacttt
    12781 taaagattta gcaaaagaaa ttgttgattt ataccgttct aaataagctt ttgaagggat
    12841 gatttaaatg agaaaattag gaatatccgt atttccgcaa cacgtagcgc ttgaagaatc
    12901 attagaatat attgaaacag ctgcaaaata tggttttagc cgtatcttca cttgcttgat
    12961 ttctgctaat gatgaagctg aatttgctaa attagaaacc atttgcaaac gcgcaaaaga
    13021 attaggattt gacgttattg ctgatgttga tcctactgta tttgaatcgt taaatatcac
    13081 ttataaagaa ttagatcgtt tcaaagagct gggtctagct ggattacgcc tagatttagg
    13141 tttctctggt tccgaagagg cagcaatgtc ctttgatgat acggacttga aaatcgagct
    13201 aaacattagt aatggtactc gctacgttga aaatatccta tcttaccaag caaacgtagg
    13261 aaatatcatt ggttgtcaca acttttatcc aagaaaatac accggtcttt ccagagagca
    13321 tttcttgcgc acgagtaaac aattcaaaga cttaaaccta cgtacagctg ctttcatatc
    13381 ttctaacagt ggcgaatttg gcccttggtt tgttgtagac ggcggacttc caacaatgga
    13441 agaacatcgc ggagtggaca ttactgtgca agcaaaagac ctttggaaca ctggcctgat
    13501 tgatgacgtc atcgttggga acatgttcgc ttcagaagac gaattacgcg ctttaagcga
    13561 attaaaccgt aatgaattac aattagcagt agagttttta gacggtgcaa cagacgtgga
    13621 aaaagaaatc gttttaacac aaaaacattt caatcgtggc gatgcttccg agtatgtgtt
    13681 acgttcaaca atgacgcgtg ttaatttcaa acaattcgat ttccctgcac acgacacaaa
    13741 tactattgca aaaggcgatg tgactatcga taacgacggc tacgaacgct acaaaggcga
    13801 aatgcaagta gcacttcaag aaatggaaaa ctccggcaac accaatatcg ttgctcgaat
    13861 tgttccagaa gaacgttatc tactagacac cattctaccg tggcaacatt ttagattggt
    13921 tgagaagaag aaataataaa aattacaagt taaaaaacgt ctgcaatcca tttttcaatg
    13981 ttgattgcag acgttttatt ttgtcgaaaa ttaatatgtt gcttgattta ttctttacat
    14041 ttcccaatca acccatacaa aaacaactgc actatctccg cttgtttctc ctcaagttct
    14101 tcctctggga ctgtgaaacc taaaccatta attgcttcaa taaaaagttg aatagattga
    14161 tccgaaagac ggttatcaat aattttttct tgcttgccga tagcgatgta tttcatataa
    14221 atctcatttt taagtgcatt aatattattc actaacagcg tgataaattg cgcgtctttg
    14281 cttgcttctt gcgatataaa tttacttaaa gacagattta tttctgcatt acagagctgg
    14341 agagcccgct ctaatttttg cgtgaatgtt ccttctgatg ctaaaatttc ttccgctaaa
    14401 gttatggtat cttgcataat aatgctagca cattcaccaa caagcgcttc tttacttcca
    14461 aaataattat aaatagacac ttgcgaaaca tctgcgaggg cggcaatatc tttaatactt
    14521 acatcagaaa aaccttgttc tccaaataat gaaagagctg cctgaataat tgcagtcttc
    14581 ttttttagcg ttcttttttc ataattattc atatcctaaa cacatcccta agctaat
//
LOCUS       DASDYO010000079        14486 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.079, whole genome shotgun sequence.
ACCESSION   DASDYO010000079 DASDYO010000000
VERSION     DASDYO010000079.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14486)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14486)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14486
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.079"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..171
                     /locus_tag="U0290_001936"
     CDS             <1..171
                     /locus_tag="U0290_001936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2301975.1"
                     /translation="EINDNATKEVRLIIVSASDRIAEELANIIEILKSWNYGELKKCF
                     QHIMNAMILIAF"
     gene            216..815
                     /locus_tag="U0290_001937"
     CDS             216..815
                     /locus_tag="U0290_001937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014952531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301976.1"
                     /translation="MLVIVAASVGYYFIKENERKTPQTIDYKTVETKRTDLSVYVSAE
                     GHIVKKENEWPDYEDFAVKIMVDELEINQIKEKQTADVYVEAVNNKVYKGKVVDINEK
                     GIINGSVTSYAVTIDLEDETKVKENMSVSADVLVALEKKILTIPIEAVNTDKADKHYV
                     YTVDANKQKKKIWIEVGKHNTKSIQVVKGLTEKQLVIIP"
     gene            833..1507
                     /locus_tag="U0290_001938"
     CDS             833..1507
                     /locus_tag="U0290_001938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003770363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2301977.1"
                     /translation="MIQLFNISKSYQMGECTIKALDNVSLQIDQGEFLAIIGPSGSGK
                     STLMNILGILDRATIGEYYLNKTNLMRISDKKISRIRNRKIGFIFQQFNLMPRLTAFE
                     NVELPLVYRGVGKATRKKVVLKSLERVGLLDKEKHIPAQLSGGQQQRIAIARAIAGSP
                     ELILADEPTGALDSKTGEEVMTLLREIHREGNTLIMITHDKEIANQAERIIEIKDGKL
                     REWNKL"
     gene            1504..2670
                     /locus_tag="U0290_001939"
     CDS             1504..2670
                     /locus_tag="U0290_001939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2301978.1"
                     /translation="MTLLQSIKLALKQLLSTKFRTFLTMLGIIIGVFSVILLVSIGEA
                     ISKNVSTQLGDMGSNLLTVNFYSDNPNDKFTYKDAKKLLNEDEIGSPEVMQTKEVRTS
                     EKTASNQVAGINEYYASIKNLELASGRFCSNVDVIYAQKVTIIGSEIAKTYFKEQNPI
                     GEYLQIAGARYMVIGVLKEKGESLFGSADKKLFIPISSAERLFKTDTVDLYYIQTKKV
                     EQVPAAVKVVKKKMSQFFPSNEDAYTVANQQQALDTFDSITGTLTIGLGAIAGISLLV
                     GGIGIMNIMLVSVSERTREIGIRKAIGASSGNILMQFLIEAVVLSLVGGCIGILLGIF
                     SAQIVTTTSSFEMYVSASTILLAVGFSMCIGIVFGVIPAQKASKKMPIDALRAD"
     gene            2689..2832
                     /locus_tag="U0290_001940"
     CDS             2689..2832
                     /locus_tag="U0290_001940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003760374.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BH0509 family protein"
                     /protein_id="HEM2301979.1"
                     /translation="MEKEQQTDDTWVLVEIVSLITNVERQRLRELSYTELEEFYERVV
                     VEQ"
     gene            2903..3385
                     /locus_tag="U0290_001941"
     CDS             2903..3385
                     /locus_tag="U0290_001941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463927.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SRPBCC family protein"
                     /protein_id="HEM2301980.1"
                     /translation="MNESICKRDNGGAVVNFELEINATKAEVFALLTTNAGLAKWFNE
                     LEVGELGADGYLLFVMTPEEKITMPIRAFETNQKLAFEWDQDEVDFELNEITANKTRL
                     TFREQLTTITEHSPRDISGWHICLKKLQASAEGKIYDFNKTEFETLFAKYQKELNIEK
                     "
     gene            3554..4012
                     /locus_tag="U0290_001942"
     CDS             3554..4012
                     /locus_tag="U0290_001942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463928.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2301981.1"
                     /translation="MIVSEEQLFLNQHLRTKEEVLAFIADKAEEIGITTDSAQVERDL
                     WAREKEYATAVQQLIAIPHAKTEAISEAKLLFIRLTEPIDWESKEGFKAQAIFAILVP
                     ASEASQQHLKILSSVAVNLLEEAFQEQILTIKTEHELMDYLKDNLEGELI"
     gene            4009..4341
                     /locus_tag="U0290_001943"
     CDS             4009..4341
                     /locus_tag="U0290_001943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463929.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIB"
                     /protein_id="HEM2301982.1"
                     /translation="MKVVGVTSCIAGLAHTPMAAKALEKAGVKLGHDVKIEQQGAMGT
                     IDEITPAEVSAADVVIIAADKVIDGEERFKGKPVVRVKIGQCVANGEAVLSKVVAAIE
                     ARKQKEAN"
     gene            4345..5457
                     /locus_tag="U0290_001944"
     CDS             4345..5457
                     /locus_tag="U0290_001944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_017471260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HEM2301983.1"
                     /translation="MKGKLNEAKDHLMSGISYALPVIIAGSLVVAVAKLIGIIGGVTN
                     LDAYADASGFYHYVYLFQNVGWAAIGLLNLVLAGYIAYSIAGKPALAAGFVGGVLATS
                     TNAGFLGAVVAGFFAGWLTNWVKKHVRITGPAASSLPLIILPLITVGATGILMSLILG
                     GPLGWLNQTLLDWVTEMCKNDTNVIILALILGAMIGFDLGGPVNKAAWMAGNALFMSG
                     IYLPSIMINVAICIPPLGYGIATLLRKKNYSTTFKEAGNGALIMGLIGVTEGAIPFTL
                     RSPGKLIPLNVIACAIGSAVTMGLGAYVKMPPIGGMYGFFTIGNGWAYLVGGLVGAFI
                     IGICANLFVNFTEEETAAADDAVDDIDISFDEIEIK"
     gene            5479..8106
                     /gene="mngB"
                     /locus_tag="U0290_001945"
     CDS             5479..8106
                     /gene="mngB"
                     /locus_tag="U0290_001945"
                     /EC_number="3.2.1.170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mannosylglycerate hydrolase"
                     /protein_id="HEM2301984.1"
                     /translation="MAKTKVHVIPHSHWDREWYFTSSRSTIYLVKHLKEVIETLEAKD
                     DYHFYLMDAQSSLIEDYLRYCPEDKTRLEKLIAEKRLITGPWYTQTDQLVISQESIVR
                     NLLYGTRIAREMGHSMAVGYVPDAFGQGGNMPQIYKEFGISKFLFWRGVADNRLKQTE
                     FIWRGDDGTEMLAEQIPFGYYYGANIPENEAELKTYLDDQIGALEEKASTRNVYFPNG
                     LDQAPVRKNLPELVAKFNELDSTREYQIASPETFFADLEKDVTNLPVIAGELTEGKHS
                     RLHKSIFSTRADLKQANNEIENFLSNVLEPVLSISYSLGNRYPHNELAEIWKLMFENA
                     AHDSIGGCNSDTTNRDVKHRYKLASDLATNLLDLNMRLISEKIEQKQPFQFTVFNPLP
                     YEKSGVIKMTAYIPEDNFEIEDTQGNTLEYTILEKTDLTDYVLNQHIDLNPSKSIYLP
                     EKVFLATMLVNVNSLPALGYDTIYFNLEKETAEQEPTQSTMTKIENEFYEIQLAANNS
                     LTIHDKKAGRTYTDQMLFVENGDDGDSYNYSPPRKDLVISSEEAVVESLESSISSVNQ
                     TLTISFKLNVPYNLEERANGEKSNEMTIKTVISLRKNEELIRFDVQVANQVLSHRLCV
                     TFATEIASKFSTADQLFAPIQRPVRLPEMDVWEAEEWQEAPISIEAMQSFVSLHDEAH
                     GVAVMTEGVREYEIIGENYDTISLTLFRTFSHMGKTDLLYRPGRASGESIVATPDAQL
                     LGEINATFALTLFESSFDEADIAKKAKEYLSNPPVYQMSDFLNGRLIYVYRDEEKTLD
                     ATYSLALPTIDGAIISAVKKAEDADAFITRFFNPYLQKEITIPEVFQGKERHLDESES
                     NEKQTRLKHAKVQSYLFEK"
     gene            8139..10073
                     /locus_tag="U0290_001946"
     CDS             8139..10073
                     /locus_tag="U0290_001946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2301985.1"
                     /translation="MGYFAYKRLETLYGMLLDAGSHLSAQKLSQDLHISERTIRTDIA
                     KLTEFLESYGATITLTRGAGYKIEILDSLVFQAFQAEKNKPKNAGYFDLDNPEERVKY
                     EIFMLLSSGDYIKLEDLADTIFASRATISNDMKQVRKVIAVYDLTLVSKPGSGVKIIG
                     EEEKMRYALTALIASKNAPESYLETFFEWHKQKDKLQKLMTAVTDYFFATNIRFTDEA
                     LQNLLLHMMILVERIELGHTLEKFELTDVSEEEIAIATKLSTIIESLFEIDIADADKN
                     YLLLQIASKRILNVEDKEISEFDDYAYIEGMLNRIESHYFYHLQDDMQLKKDLVAHIH
                     SMLYRVKYHMTVKNPMTEHIKRYYPLAYEITLDAVESLKKDYPYDINQNELAYLALHI
                     GASLERNYQISYYRHKSALIVCGSGFGTARIVEAKVKSAVSNLDITKVVSIQEYNRFI
                     HIEEDIILSTVRIPEKNKPVIKISNIPTNEELKMLGAIIQEQTDPNRGFLSNFFTADF
                     FARSSMTNKTAILEEMVDSLRQQNIVGEGFLQSVLEREKLGSTVLGTGIAIPHPLGLM
                     AKETKIVIRILDKPIKWDQKQSVRAVFLLCISKNDYEEAINIYELLVELVREEYGEKL
                     SRLSDFHAFTALANDILKKK"
     gene            10200..10616
                     /locus_tag="U0290_001947"
     CDS             10200..10616
                     /locus_tag="U0290_001947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463933.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HEM2301986.1"
                     /translation="MNRQTEFTLLIVGASLSILTFLGAMLYTIIFGLNTLMVADTFGY
                     YSSSEETIVLGIITFFSVVAAFFALGSAVFGFIGAFKVKSDGPKVKTLGVCFIVLGGL
                     QVFTIHGILFLIAGILTITKKEYKTNSKEDEGTKWE"
     gene            10607..11005
                     /locus_tag="U0290_001948"
     CDS             10607..11005
                     /locus_tag="U0290_001948"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463934.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301987.1"
                     /translation="MGMITFLPIFFIFAIFLGLAAKVLLAIWIYKDAEQRGMNAILWC
                     LLMVFINVIIILVIYLIVRNKGEVMKQNLGLLISGIGIAVLNTLMAIMAFIFIIFFAV
                     NDGGMHNKMDGYNYDYDDGYEYDMDNFEDF"
     gene            11114..12121
                     /locus_tag="U0290_001949"
     CDS             11114..12121
                     /locus_tag="U0290_001949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463935.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEM2301988.1"
                     /translation="MDTVILITVIIVIMGLAFDFINGFHDIANAVATSISTRALKPRV
                     AIGIAAVMNFLGAISFTGVAESLTKSIVDPFSLNNGEFVVLCGLIAAVIWNLMTWLVG
                     MPSSSSHALIGAIAGASIASASSFSVLNWSGFTTIIIALIISPIIGFTVGYLIYSLFK
                     HLFHDKKLGKMNRRFRFIQIGTAAAQAYSHGTNDAQKTMGIITLALVASGLLKESAGI
                     PFWVQVSCAASMAIGSSVGGYRIIKTVGTKIMKITPVTGVASDLSSLSVIMTATLIHL
                     PVSTTQVIDSSIMGVGTANHKKEVNWRTGKNMVVTWFITLPLAGLLAAVVYWISAAIF
                     L"
     gene            12137..12517
                     /locus_tag="U0290_001950"
     CDS             12137..12517
                     /locus_tag="U0290_001950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2301989.1"
                     /translation="MKIEHVALWTTNLEQMKQFYVTYFGATANDLYENKTKGFTSYFL
                     SFEDGARLEIMSRTDVTGITTGENLGWAHIAISTGTKEAVDELTEKLRQDGFAIAGEP
                     RMTGDGYYESVVLDPEGNRIEITW"
     gene            12586..12978
                     /locus_tag="U0290_001951"
     CDS             12586..12978
                     /locus_tag="U0290_001951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1149 family protein"
                     /protein_id="HEM2301990.1"
                     /translation="MDIVTNKIVVEKYNFETIMEENEQFENKIELEVHEVEPVNGNVE
                     LMSKGKIFKITIPFLLVLENFRIDGRISRIIQLKDFFGDFSDLEAVDVEGLSNPLIDY
                     IKRLTYDVTEIAFDEPGVSLDFNANHNS"
     gene            12991..13413
                     /locus_tag="U0290_001952"
     CDS             12991..13413
                     /locus_tag="U0290_001952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NusG domain II-containing protein"
                     /protein_id="HEM2301991.1"
                     /translation="MRQYMKMVRPFDFVIIILLILGSFLPLILFSVAEAKHVGDDVVA
                     VISQDGKVVREIPLTGHKGNEQFTIKGKGAQYNLMEVDGERIRIKEDNSPDQVGVKMG
                     WKSKAGDTIVCLPHKVFVEIKSTNKKSKDPDTDLIVPN"
     gene            13641..>14486
                     /locus_tag="U0290_001953"
     CDS             13641..>14486
                     /locus_tag="U0290_001953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2301992.1"
                     /translation="MKAKNNFFKQLISIMTVLSLLFMVLGIQGNNEVKAATLATPPAP
                     INQIFPDADLAEGIRAVLQKASVTDVVTQEELESITKLVVAGEKVASIQGIEYLTNLE
                     YLNLNGNQITDISPLSNLVKLTNLYIGTNKITDISALQNLTNLRELYLNEDNISDISP
                     LANLTKMYSLNLGANHNLSDLSPLSNMTGLNYLTVTESKVKDVTPIANLTDLYSLSLN
                     YNQIEDISPLASLTSLHYFTAYVNQITDITPVANMTRLNSLKIGNNKITDLSPLANLS
                     QLTWLE"
BASE COUNT         4956 a         2386 c         2994 g         4150 t
ORIGIN      
        1 gaaatcaatg ataatgcaac aaaagaagta agactaatta ttgtttcggc aagtgatcga
       61 attgcggaag aattagctaa tataattgaa attttaaaat catggaatta cggggaacta
      121 aaaaaatgtt ttcaacacat aatgaacgca atgattttga ttgcttttta aagagaggtt
      181 tttaaatatt gaaaaaaata agctgggtga ttatcatgct ggttatcgtt gctgcatcgg
      241 ttggctatta ttttataaaa gaaaatgagc gaaagacgcc acaaacaatt gattacaaaa
      301 cagttgaaac aaaaagaaca gatttaagtg tatatgtttc cgcagaaggt cacattgtaa
      361 aaaaagaaaa tgaatggcca gattatgaag attttgctgt caaaattatg gtagatgagc
      421 tagaaattaa ccaaataaaa gaaaaacaga cagctgatgt gtatgtcgaa gcagtaaata
      481 ataaagtata caaaggaaaa gttgtagata taaatgagaa gggcattata aacgggtcag
      541 taacttctta tgccgtgacg attgatttag aggatgagac gaaagtaaaa gaaaatatgt
      601 ctgtaagtgc tgatgtactt gtggctctag aaaaaaagat tttaacaatt ccaatagaag
      661 ctgttaatac ggataaagct gataaacatt atgtctatac agttgatgca aataaacaaa
      721 agaagaaaat ttggattgaa gtaggcaaac ataatacgaa atctattcaa gtagtaaaag
      781 gtcttacaga gaaacaactt gtgattattc catagacgga ggtgagcaag acttgataca
      841 actatttaat atttccaaat cctatcaaat gggtgaatgc accataaagg ctctagataa
      901 tgtatcattg caaattgatc aaggggaatt tctggccatt atcggaccgt ctggctctgg
      961 aaaatctact ttaatgaaca tcctcggtat acttgacaga gcaacgatag gagaatacta
     1021 cctcaataaa acgaatttaa tgcgaatatc agataagaaa atttctcgaa taaggaatag
     1081 gaaaattggt tttatttttc aacaatttaa tttaatgcca cgacttactg cttttgaaaa
     1141 tgtagaattg ccattagtat atcgaggtgt gggcaaagct actcgaaaaa aagtagtatt
     1201 aaaaagttta gaacgtgtcg gactattaga taaagaaaaa catataccag cccagctttc
     1261 aggaggacag cagcaacgga ttgcaatagc tcgagccatc gctggaagtc cagaattaat
     1321 attagcagat gaacctactg gcgcgctaga ctctaaaact ggagaagaag taatgacttt
     1381 gctaagagaa attcatagag aaggaaatac attaatcatg attacccacg acaaagaaat
     1441 tgcaaatcaa gcagaacgaa taatagaaat aaaagacgga aaactccgtg aatggaacaa
     1501 attatgactc ttttacagag tataaagtta gcgctaaaac aattattgtc caccaaattt
     1561 cgaacatttt taacaatgct tggaattatt attggtgttt tttctgttat attacttgtt
     1621 tcgattgggg aagctatatc gaaaaatgtc tccacacaat taggtgatat gggaagtaat
     1681 cttttgactg ttaattttta ttcagataat ccaaacgata aattcacata caaagatgca
     1741 aaaaaacttt tgaatgaaga tgaaattggt tcgccggaag tgatgcagac aaaggaagtt
     1801 agaacaagtg aaaagacagc tagtaatcaa gtagcgggaa taaatgaata ttatgcgagc
     1861 ataaaaaatt tggaattagc atcaggccgt ttttgctcga atgtagatgt tatctatgcc
     1921 caaaaagtga caattattgg ctcagaaatt gcaaaaactt attttaaaga acagaatccg
     1981 ataggtgaat atttgcaaat tgcaggtgct aggtacatgg tcattggagt tttaaaggaa
     2041 aagggggaga gtttatttgg atcggcagac aaaaaacttt ttatcccaat ttcttccgca
     2101 gaacgacttt ttaaaacaga tactgtggat ttgtattata ttcaaacaaa aaaagtagaa
     2161 caagttccag cagcagttaa ggtagtaaag aaaaaaatga gccagttttt tccaagtaat
     2221 gaagatgcgt atacagttgc aaatcagcaa caggcgttag atacgtttga tagtattacg
     2281 ggaacactca cgattggact aggtgcgatt gcagggattt cgctactcgt tggcggtatt
     2341 ggtattatga atattatgct cgtgtctgtc tcagaacgaa cccgagaaat tggaattaga
     2401 aaagcgattg gcgcaagtag tggcaatatt ttaatgcagt ttttgattga agcagttgtg
     2461 cttagtttag taggcggttg tatcgggatt ttactaggaa ttttttccgc gcaaatagtt
     2521 acaactacat caagttttga aatgtatgtt tctgcttcta cgattctttt agcggttggt
     2581 ttttcgatgt gtattgggat tgtatttggt gtaattcccg cacagaaagc ttcaaaaaaa
     2641 atgccgatag atgcgttacg ggcagattaa ctagaggagg cgtgttggat ggagaaagag
     2701 caacaaacgg atgatacttg ggttttagtt gaaattgtta gccttataac caacgtggaa
     2761 cgacaaagat tgagagaact tagttataca gagttagaag aattttatga aagagtagta
     2821 gtggagcaat aattaaatct tgctttttgc tagaatgata aatctatgcg aaaatgaaag
     2881 caaattggca ggagggattt aaatgaacga atctatttgt aaacgggata acggaggagc
     2941 tgtagttaat tttgaattgg aaattaatgc aacaaaggca gaggtttttg ctttattaac
     3001 gacaaacgcc ggactagcaa agtggtttaa tgagctggaa gtaggcgaac taggagcaga
     3061 tggctatcta cttttcgtca tgacacctga agaaaaaata accatgccaa ttcgtgcatt
     3121 cgaaactaac caaaaacttg ctttcgaatg ggaccaagat gaagttgact ttgaactaaa
     3181 tgaaatcacc gcaaataaaa caagattgac tttcagagaa caacttacaa ctattacgga
     3241 acacagccca agagatattt ccggttggca tatttgcttg aagaaattac aagcgagcgc
     3301 agaagggaaa atatacgatt tcaacaaaac ggagttcgaa acgctcttcg ccaagtatca
     3361 aaaagaactt aatatcgaaa aataaatcct ttagaaaagt cgtaaatgaa gccgagaatg
     3421 ctttgtttat ggcttttttt gtatgtatta atttttttcc actttaactg gaaattcctt
     3481 atgttcaaaa aagtaatcgg tttcattaga atgtaattgt aagcaaggca ttgaaaaaat
     3541 acggggtgac gaaatgatag tatcggaaga acaattattt ttaaatcagc atctacgcac
     3601 aaaagaagaa gtgctagctt ttattgcaga caaggcagaa gaaatcggta tcacaacaga
     3661 ttcagctcag gtggaacgtg acttatgggc tcgcgaaaaa gaatacgcaa cagcagtaca
     3721 acaattaatc gctattccac atgcgaaaac agaggcaata tcagaagcaa aactgctttt
     3781 cattcgcctc actgaaccga ttgattggga gtcaaaagaa ggttttaagg cacaagccat
     3841 ttttgccata ttagttccag ctagtgaggc cagccagcaa catctgaaaa ttttatctag
     3901 cgtggctgtg aatttactag aagaagcatt tcaagaacaa attttaacga ttaaaacgga
     3961 acacgaattg atggattact tgaaagataa tttggaagga gaattaatat gaaagttgta
     4021 ggagttacgt catgtatcgc aggacttgcg cacacaccaa tggcagcaaa agcattagaa
     4081 aaagcaggag taaaattagg acacgatgtc aaaattgagc aacaaggagc gatggggaca
     4141 attgatgaaa tcacgccagc tgaagtgagc gcggcagatg tagttatcat cgcggcggat
     4201 aaagtaatcg acggggaaga gcgtttcaaa ggaaaaccag tcgttcgtgt gaaaattggt
     4261 caatgtgttg cgaacgggga agcggtgtta agtaaagtag ttgcagcaat tgaagcacgt
     4321 aaacaaaagg aggctaacta agtcatgaaa gggaaattaa acgaagcaaa agaccactta
     4381 atgtcgggta tatcctatgc gctaccagtc attatcgcag gttcacttgt tgtagctgtt
     4441 gcaaaattga ttgggattat tggcggggtt acaaatctgg atgcttatgc tgatgcaagc
     4501 ggattttatc attatgttta tctatttcaa aatgtaggtt gggcggcaat tggcttactt
     4561 aacttagtac ttgcgggata tatcgcttat tcaatcgctg gaaaacctgc tcttgctgct
     4621 ggttttgttg gtggggtcct tgctactagt acaaatgctg gtttcttagg tgccgttgtc
     4681 gctggtttct tcgcaggttg gttaacaaac tgggtgaaaa aacatgttcg aatcactgga
     4741 cctgctgcaa gttctttacc actaattatt ttgccactta tcacagttgg tgccacgggg
     4801 atactgatgt cactaattct cggcggaccg cttggttggt taaaccaaac gttacttgat
     4861 tgggtaactg aaatgtgtaa aaacgataca aacgtcatta ttctagcact tattttagga
     4921 gcaatgattg gatttgacct tggtggacct gtaaacaaag ctgcttggat ggctgggaac
     4981 gcgctattta tgagtggaat ttatctacct tcaatcatga tcaacgtcgc aatttgcatt
     5041 ccgccacttg gctacggaat cgcaacacta ttacgcaaaa agaattattc tactacattc
     5101 aaagaagctg gaaatggcgc gctaatcatg ggactaattg gggtcacgga aggtgcgatt
     5161 ccatttacac tacgtagccc tggtaaatta attccgctaa atgtgattgc ctgcgcgatt
     5221 ggtagtgccg taacgatggg acttggcgct tatgtgaaaa tgccgccgat tggtggaatg
     5281 tacggtttct tcactattgg taacggctgg gcttacttag ttggtggctt ggttggtgca
     5341 tttattattg gaatttgtgc gaacttattc gtcaatttca cagaagaaga aacagctgct
     5401 gcagacgatg ctgtggatga tatcgatatt agttttgatg aaatagagat taaataatag
     5461 ttggaggatt taatgaaaat ggctaaaacg aaagtacacg taattccgca ttcgcactgg
     5521 gatagagaat ggtatttcac ttcaagccgt tcaacaatct atttagtgaa gcatttaaaa
     5581 gaagtaattg aaacattgga agcgaaagac gattaccatt tttacttaat ggatgcccaa
     5641 agctctttaa tagaagatta tttgcgctac tgcccggaag ataaaacaag attagaaaaa
     5701 ctgattgctg aaaaacggct tattaccggg ccatggtata cacaaacgga ccaattagtc
     5761 atttcacaag agtcgattgt tagaaacttg ttatatggta cgagaattgc acgcgaaatg
     5821 ggacatagca tggctgtcgg ttatgtcccg gatgcattcg gacaaggcgg gaacatgcca
     5881 caaatttata aagaatttgg aatttcaaag tttctgtttt ggcgcggagt tgccgataat
     5941 cgcttaaaac aaaccgaatt tatctggcgc ggtgatgatg ggacggaaat gctagcagag
     6001 caaattccgt ttggctatta ctacggcgcg aacattccgg aaaacgaagc cgaacttaaa
     6061 acctatttgg atgatcaaat tggtgctctg gaagagaagg cctcaacgcg aaatgtctat
     6121 ttcccaaatg gcttagacca agcgccagtt aggaaaaatt tgccagaatt agttgcgaaa
     6181 ttcaatgaat tagatagcac gcgggaatac caaatcgcat caccagaaac atttttcgcg
     6241 gacttagaaa aagatgtgac caatttgcca gtcattgctg gtgaactaac agaaggaaaa
     6301 catagtcggc tgcacaaatc gattttctct actcgagctg atttaaaaca agcaaacaat
     6361 gaaatcgaaa actttttaag taatgtatta gagccggttc tttccatcag ctactctctt
     6421 ggaaatcgct atccgcacaa tgaactcgca gaaatttgga agttaatgtt tgaaaatgct
     6481 gcacatgata gcattggcgg ctgtaatagt gatacaacca accgcgacgt caaacatcgt
     6541 tacaaattgg cttcggattt agcgaccaat ttactcgatt taaacatgcg cctaatcagc
     6601 gaaaaaatcg aacaaaaaca accgttccaa tttaccgttt tcaacccact accatacgaa
     6661 aaaagcggtg tgattaaaat gaccgcgtat atcccagaag ataatttcga gatagaagat
     6721 acgcaaggaa acacgcttga atacacgatt ttagaaaaaa cagacctaac tgattacgtc
     6781 ttaaatcaac atatcgacct aaatcctagc aaatccattt atttgccaga aaaagtcttt
     6841 ttagcaacaa tgctagtaaa cgtaaatagt cttccggcgc taggctacga caccatctac
     6901 tttaatttag aaaaagaaac agcggagcaa gaaccaacac aatccaccat gacaaaaatc
     6961 gaaaacgaat tttatgaaat ccagctagct gccaacaatt cactcacgat tcatgataaa
     7021 aaagcgggca gaacctatac agatcaaatg ctttttgtgg aaaatggcga tgatggcgat
     7081 tcgtataact attcgccacc acgtaaagac cttgtaatct catcggaaga agcggtagtg
     7141 gaaagcctag agtctagtat atcaagcgtc aaccaaacat taactatttc cttcaagtta
     7201 aatgtaccgt ataatttaga agaacgtgca aatggtgaaa aaagtaacga aatgactatc
     7261 aaaacagtaa tttctttacg taaaaatgaa gaactcattc gctttgatgt acaagttgct
     7321 aatcaagtat tgagtcatcg tttatgtgtt acattcgcca ccgaaattgc tagcaaattc
     7381 tcaacagctg atcaattatt cgcaccaatc cagcgtccgg ttcgtcttcc agaaatggat
     7441 gtatgggaag cagaagaatg gcaagaagcg ccaatttcga ttgaagctat gcaaagtttt
     7501 gtcagcttac acgatgaagc tcatggggtt gctgtaatga cagagggcgt acgcgaatat
     7561 gaaatcattg gcgaaaatta cgatacgatc tcgctaaccc tgttccgcac atttagccat
     7621 atgggtaaaa ctgatttact atatcgtcct ggtcgcgctt ccggtgagtc aatcgttgcg
     7681 acaccagacg cacaactgct tggcgaaata aatgccacat ttgcgctaac tttattcgaa
     7741 agctcttttg acgaagcgga tatcgcgaaa aaagcaaaag aatatctatc gaacccgcca
     7801 gtttaccaaa tgtctgattt tctaaacggc cgcttgattt atgtttaccg cgatgaagaa
     7861 aaaacgctag atgccacata tagcttggca cttccgacaa tagatggagc gattattagt
     7921 gcagtaaaaa aagccgaaga cgccgatgcc ttcattacac gctttttcaa tccatattta
     7981 caaaaagaaa ttaccattcc agaagttttc caaggcaagg aacgccactt ggatgaaagc
     8041 gaatcaaacg agaaacaaac gagattaaaa catgcaaaag tacaaagcta tttatttgaa
     8101 aaataacgct taactaccta aaaaaggagc tgctaataat gggatatttc gcttataaac
     8161 gtttggaaac actatatggc atgctccttg atgcgggtag ccacttatca gctcagaaac
     8221 tcagccaaga tttacatatt tccgaacgta cgatacgaac agatattgct aaactaactg
     8281 aatttctcga aagctacggg gcaacgataa cgctaactcg aggcgcggga tacaaaatcg
     8341 aaatccttga ttcgttggtt tttcaagctt ttcaggccga aaaaaacaaa ccaaaaaatg
     8401 cgggttattt tgaccttgat aatcccgaag aacgcgtgaa atacgagatt ttcatgctgc
     8461 tatcaagcgg cgactatatt aaattggaag acttggcaga tacgattttt gctagccgtg
     8521 caaccatttc aaatgatatg aagcaagtac gaaaagttat tgcggtgtat gatttaacgc
     8581 tcgtctcaaa accaggtagc ggcgtgaaaa tcatcggaga agaagaaaaa atgcgctatg
     8641 ctctaaccgc gttaattgct tccaaaaacg ccccggaatc ctacttagaa acatttttcg
     8701 aatggcacaa acaaaaagat aaactgcaaa aattaatgac agctgtgacg gattattttt
     8761 ttgcgaccaa cattcgtttc acagacgaag cgcttcaaaa cttactttta catatgatga
     8821 ttttggtgga acgaattgaa ctcggtcata cgttggaaaa gtttgaatta acggatgtta
     8881 gtgaagaaga aatcgcgatt gcgactaaat tgtctactat tatagagtcg cttttcgaaa
     8941 tagacattgc ggatgcggac aaaaattatt tgcttctcca aatcgccagc aaacgaattc
     9001 tgaatgtaga agataaagaa attagcgaat ttgatgatta cgcgtatatt gaaggcatgt
     9061 tgaaccgcat tgagtcccat tacttttatc atttacaaga tgatatgcag cttaaaaagg
     9121 accttgttgc tcatattcat tccatgttat atcgagtaaa ataccatatg accgtcaaaa
     9181 atccaatgac agagcacatt aaacgctatt accctttagc ctacgaaatc acgctcgatg
     9241 cagtggaatc actaaaaaaa gactacccgt atgacattaa tcaaaatgaa ttagcctatt
     9301 tagcgctgca tattggggca tccttagagc ggaattatca aatctcttac tatcgtcata
     9361 aatcagcctt gattgtttgt gggtcaggct ttggaacagc acgaattgta gaagcgaaag
     9421 taaagtcagc agtgagtaat ctcgatatta caaaagtagt ttcaatccaa gaatataacc
     9481 gttttatcca tattgaagaa gatatcattc tctccaccgt tagaatacct gagaaaaata
     9541 aaccggtcat caaaatcagc aatatcccaa ccaatgaaga attaaaaatg cttggtgcca
     9601 ttattcaaga acaaaccgat cctaaccgcg gctttctatc gaattttttc acagctgatt
     9661 tttttgccag aagcagtatg acaaacaaaa cagcaatttt agaagaaatg gttgactcat
     9721 tacgccaaca aaatattgtt ggtgaaggct tcttgcaatc ggttcttgaa cgtgaaaaat
     9781 taggctcaac tgtactcgga accggaatag caatcccaca tccactcgga ctaatggcca
     9841 aagaaacaaa aatcgttatt cggatattag ataaaccaat caaatgggat caaaaacaat
     9901 ccgttcgcgc cgtattttta ttatgtatta gcaaaaatga ttatgaagaa gccattaata
     9961 tttatgaatt gctagtagaa ttagtacgcg aagaatatgg tgagaagctt tcaaggcttt
    10021 ccgactttca tgcattcact gctttagcaa atgatatttt gaagaaaaaa taaaagctac
    10081 ttcctttttt aggaagtggt tttttcgtga atttttcgtg aattttacca tttttcgttt
    10141 agtgataggt tatttcatgg tacactataa gaataataac taaatatatg gaggatttaa
    10201 tgaacagaca aacagaattt acattactta ttgtgggggc ttcattaagc attttaactt
    10261 ttctaggtgc tatgttgtat accattattt ttggacttaa taccctaatg gtagctgata
    10321 cttttggtta ttatagtagc tcagaagaaa cgattgtact tgggataatt actttctttt
    10381 cagtagttgc tgcatttttt gcactcggat cagcagtttt tggatttatc ggtgcattta
    10441 aagtcaaaag tgacgggcca aaagtaaaaa cattaggcgt ttgttttatc gttttgggtg
    10501 gattgcaagt atttactatt cacggaattt tatttttgat tgcaggaatt ttaacaatta
    10561 caaaaaaaga atacaaaaca aattctaaag aagatgaggg gacaaaatgg gaatgataac
    10621 gttcttacca atatttttta tttttgcgat ttttttagga ctagcagcaa aagtcctttt
    10681 agcaatttgg atttataaag atgctgaaca acgcggaatg aacgcaattc tttggtgtct
    10741 gttaatggtt ttcattaatg tcattattat tcttgttatt tacctgatcg tacgtaataa
    10801 aggagaagtc atgaagcaaa atttaggact actaattagt ggtattggta ttgcggtact
    10861 aaatacatta atggcgatta tggcttttat ttttataatc ttttttgcgg tgaatgatgg
    10921 tggaatgcat aataagatgg acggttataa ctatgattat gacgacgggt acgagtacga
    10981 tatggataat tttgaagatt tttaataaca ccaacgagaa tctgctacct aatacaggag
    11041 cagattcttt ttatatttct ataaaagggg tatagacaat aaaaaagtga atatcgacaa
    11101 ggggaactgc tgaatggata cggttatttt aattacggtt attatcgtta taatgggctt
    11161 agcatttgat tttataaatg gatttcatga tattgcaaat gctgtggcca caagtatttc
    11221 aactagagct ttaaaaccgc gagtggcaat tggaattgcg gcagtcatga attttctggg
    11281 agccatttcg tttaccggag tagctgaatc gctcaccaaa agtattgtag atccattttc
    11341 gcttaataat ggagagtttg tcgttttatg cggcttaatt gcggcagtga tttggaattt
    11401 gatgacttgg cttgttggca tgcctagtag ttcctcgcat gcgcttatcg gtgcgatagc
    11461 tggggcctcc atcgcatcag ccagtagttt tagcgtgctt aattggtcag gatttacaac
    11521 tattattatt gcactcatta tctcgccgat tatcggtttt acagtaggtt atttgattta
    11581 ttcactcttt aagcatcttt ttcacgacaa aaagcttggg aagatgaatc gacgctttcg
    11641 ttttatccaa attggaacag ctgccgccca agcatattca cacggcacaa atgatgccca
    11701 aaaaacgatg ggaattatca cgcttgcttt agttgcgagt gggcttttga aagagtcagc
    11761 tggtattcct ttttgggtgc aagtaagttg tgcggcatcg atggcgattg gatcgtctgt
    11821 tggtggttat cgaatcatca aaacagtagg aactaaaatc atgaaaatca ccccagttac
    11881 aggtgttgcg tccgatttaa gctcactttc tgtaatcatg acagctactt tgattcattt
    11941 gccagtcagc actacgcaag ttattgacag ctcgattatg ggtgtcggaa cagctaacca
    12001 taaaaaagaa gtcaattggc gtacggggaa aaatatggtt gtaacttggt ttatcacgtt
    12061 accactagct ggacttttag cggcagtggt atactggata tcagcagcta tttttttata
    12121 ataaggagga ttttaaatga aaatagaaca tgttgcatta tggacaacta atttagaaca
    12181 aatgaagcaa ttttacgtca cttattttgg tgcaacggcc aatgatttat atgaaaacaa
    12241 aacaaaaggc ttcacttctt actttctttc gtttgaagac ggagcaagac ttgaaattat
    12301 gagtcggacg gatgtaacag gaataacaac tggggaaaac ttaggctggg cgcacatcgc
    12361 tatttcaaca ggaacaaaag aagcagtaga tgagctaact gaaaaactaa gacaagatgg
    12421 ttttgcaatt gcgggtgaac caagaatgac aggagacgga tactacgaaa gtgtcgtgct
    12481 agacccagaa ggcaatcgca tcgaaattac gtggtagtat tgatttgcta ggaacttagt
    12541 tatcgtgtaa tatacggggt acatactaca aatgaggtga attttatgga tatcgtaact
    12601 aataaaattg tcgtagaaaa gtataatttt gaaacaatca tggaagaaaa tgagcaattc
    12661 gaaaacaaaa ttgaattaga ggtccatgaa gtcgagccag tcaatggaaa tgtggaactt
    12721 atgtcaaaag gaaaaatttt taaaatcaca attccttttt tattagtcct tgaaaatttc
    12781 cggattgacg gtagaatcag ccgtattatt caattaaaag acttttttgg agatttttcc
    12841 gatttagaag ctgtagatgt tgaaggctta tccaatccac taattgacta catcaaacgc
    12901 ttaacatatg atgtaacaga aatcgcattt gatgaaccgg gagttagctt ggattttaac
    12961 gctaatcata atagctagtt aggagagaaa atgcgtcaat atatgaaaat ggtacgtccg
    13021 tttgattttg taattattat tttactaatc ttgggttcgt ttttaccact aatattattt
    13081 tctgtcgctg aagcaaagca cgtgggcgat gatgtcgtag cagttatttc acaagatggc
    13141 aaagtggttc gggaaatccc gctaactggg cacaaaggaa atgagcagtt tacgattaaa
    13201 ggaaaaggcg cgcaatataa tttgatggaa gtagatggcg agcggattcg aataaaagaa
    13261 gacaacagtc cagaccaagt aggcgtcaaa atgggctgga aatccaaagc cggtgacacc
    13321 attgtttgtt taccacataa agttttcgta gagataaaat cgacaaacaa aaaaagcaaa
    13381 gaccccgata cagatttaat tgtgccgaat taaaacacac taagcgatta gtgtgttttt
    13441 ttgtttgaac caactaattt aaaaattatt gtcaaattta tgtcacgtgt tttcatggtt
    13501 gctacttagg tatctaagaa acaaaaataa gaagcggaaa tttgcatatt aaaattagac
    13561 aactacttca aaatacggtg ttacaatcaa taagccataa taatgattgt aagtaagctt
    13621 agttgaagga aggtactaaa atgaaagcga aaaataattt ttttaaacaa ttaatttcca
    13681 taatgactgt cttgagcctt ttgttcatgg tattaggtat tcagggtaat aatgaggtta
    13741 aagcagcaac tttagccacg ccaccagctc caattaatca aattttccca gatgcagatt
    13801 tagcagaagg aatacgagca gtgcttcaaa aagcaagtgt cacagatgta gtgacacaag
    13861 aagaattaga aagcattacg aaattagtag tagccgggga aaaagtagcc tccattcaag
    13921 ggatcgagta tttaactaat ttggagtact taaaccttaa tggaaaccaa attactgata
    13981 ttagcccatt aagtaattta gttaaattaa cgaatctgta tattggaact aataaaatca
    14041 ctgatattag tgccttgcaa aacttaacta atttaaggga gctatatctt aatgaagata
    14101 atattagcga tattagtcca ttagcaaatt taactaaaat gtattctttg aatttggggg
    14161 ctaatcataa cctcagtgat ttaagtccgt taagcaatat gacaggtttg aattatttga
    14221 cagtcacgga gtctaaagta aaagatgtga caccaatagc caatttaacc gacttatata
    14281 gtttaagttt gaattataat caaattgaag atataagtcc gctagctagt ttgacaagtt
    14341 tacattattt tacagcatat gtgaatcaaa ttactgatat tactcctgta gctaatatga
    14401 caaggctaaa ttctttaaag ataggaaata ataaaattac tgatttaagc ccattagcta
    14461 atctatcaca attaacttgg ctagaa
//
LOCUS       DASDYO010000080        14459 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.080, whole genome shotgun sequence.
ACCESSION   DASDYO010000080 DASDYO010000000
VERSION     DASDYO010000080.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14459)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14459)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14459
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.080"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..397
                     /locus_tag="U0290_001954"
     CDS             <1..397
                     /locus_tag="U0290_001954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="sucrose phosphorylase"
                     /protein_id="HEM2301993.1"
                     /translation="DDKSYLLARVIQCFAPGIPQIYYVGLLAGKNDIDLLEETKEGRN
                     INRHYYTIDEIKNEVKRPVVKALCNLLRFRNTSEAFDLEGSIEIETPSSNEIVIIRKN
                     KTNKITAILKANLSTKTFQISENERNILI"
     gene            463..708
                     /locus_tag="U0290_001955"
     CDS             463..708
                     /locus_tag="U0290_001955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2301994.1"
                     /translation="MVIVLLYNAKRIETVFLCLLLSENAVENQAFAIDFGKIEDIDVA
                     FKNTKRYKLFPSCTDTFKENYFLGSFSNMKSAFFLSK"
     gene            954..4508
                     /gene="rpoB"
                     /locus_tag="U0290_001956"
     CDS             954..4508
                     /gene="rpoB"
                     /locus_tag="U0290_001956"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta"
                     /protein_id="HEM2301995.1"
                     /translation="MSGHSGHDVKYGRHRTRRSFARISEVLELPNLIEIQTASYQWFL
                     DEGLREMFRDISPIEDFAGNLSLEFIDYDLGEPKYSVEESKNRDANYAAPLRVKLRLI
                     NKETGEVKDQEVFMGDFPLMTEMGTFIINGAERVIVSQLVRSPGVYFNGKLDKNGKKG
                     FGSTVIPNRGAWLEYETDAKDVVHVRIDRTRKLPVTVLLRALGFGSDQEIIDLIGDND
                     YLRNTLEKDNTDNAEKALLEIYERLRPGEPPTVDNARSLLVSRFFDPKRYDLASVGRY
                     KINKKLHLKNRLFNQTLAETLVDPETGEIIASKGDILDRRNLDQIIPNLENGVGFRTL
                     RPTDGVMEDSVLVQSIKIYAPNDDEKEINIIGNAYIEENVKHITPSDIISSISYFFNL
                     LHGVGDTDDIDHLGNRRLRSVGELLQNQFRIGLSRMERVVRERMSIQDMTTITPQQLI
                     NIRPVVASIKEFFGSSQLSQFMDQTNPLGELTHKRRLSALGPGGLTRERAGYEVRDVH
                     YSHYGRMCPIETPEGPNIGLINSLSSFAKVNKFGFIETPYRRVDPETNRVTDKIDYLT
                     ADEEDNYVVAQANSKLDEQGTFTEEEVMARFRSENLAVEKERIDYMDVSPKQVVSVAT
                     ACIPFLENDDSNRALMGANMQRQAVPLMHPEAPFVGTGMEHVSAKDSGAAVTAKHDGI
                     VEHVEAREIWVRRVSLVDGKEVTGGIDKYTLRKFVRSNQGTCYNQRPNVAEGDRVVKG
                     EILGNGPSMDSGELALGRNVLVAFMTWDGYNYEDAIIMSERLVKDDVYTSIHIEEFES
                     EARDTKLGPEEMTRDIPNVGEDALRDLDERGIIRVGAEVKDNDLLVGKVTPKGVTELT
                     AEERLLHAIFGEKAREVRDTSLRVPHGGGGIVLDVKIFTREAGDELPPGVNQLVRVYI
                     VQKRKIHEGDKMAGRHGNKGVISRILPEEDMPFMPDGTPVDIMLNPLGVPSRMNIGQV
                     LELHLGMAARALGIHVATPVFDGANEEDVWSTVEEAGMARDAKTILYDGRSGEAFDNR
                     ISVGVMYMIKLAHMVDDKLHARSTGPYSLVTQQPLGGKAQFGGQRFGEMEVWALEAYG
                     AAYTLQEILTIKSDDVVGRVKTYEAIVKGESVPEPGVPESFKVLIKELQSLGMDVKML
                     SADEEEIEMRDMDDDDFTNQNDAFNIVQPENTAAEKTE"
     gene            4679..8284
                     /gene="rpoC"
                     /locus_tag="U0290_001957"
     CDS             4679..8284
                     /gene="rpoC"
                     /locus_tag="U0290_001957"
                     /EC_number="2.7.7.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463790.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase subunit beta'"
                     /protein_id="HEM2301996.1"
                     /translation="MLDVNNFEYMKIGLASPDKIRSWSHGEVKKPETINYRTLKPERD
                     GLFCERIFGPMKDWECSCGKYKRVRYKGVVCDRCGVEVTKSKVRRERMGHIELAAPVS
                     HIWYFKGIPSRMGLVMDMSPRALEEIIYFASYVVTEPGDTPLEKKQLLSEREYRVYRE
                     KYGKGFSAGMGAEAIKKILADIDLEKETNDLKEELKSAQGQRRTRAIRRLEVMEAFRN
                     SGNNPSWMVLDVLPVIPPEIRPMVQLEGGRFATSDLNDLYRRVINRNNRLKRLLDLGA
                     PNIIVQNEKRMLQEAVDALIDNGRRGRPVTGPGNRPLKSLSHMLKGKQGRFRQNLLGK
                     RVDYSGRSVIVVGPNLKMYQCGLPKEMALELFKPFVMKELVGRGLAHNIKSAKRKIER
                     MAPEIWDVLEEVIREHPVLLNRAPTLHRLGIQAFEPTLVEGRAIRLHPLVCTAYNADF
                     DGDQMAVHVPLSAEAQAEARILMLAAQNILNPKDGKPVVTPSQDMVLGNYYLTLEREN
                     AVGEGTIFKDINEAQLAYQNGYVHLHSRIAVFAGSIPNERFTDEQRNQLLITTVGKLI
                     FNTILPKSFPYINEPTKFNLEIETPAKYFVDTTTDVRAHIAAQELIDPFKKKILGNII
                     AEVFKKFHITETSKMLDRMKDLGFKISTKAGMTVGIADILTLEEKHEILEKAHDTVEK
                     ITKSFRRGLITDDERYERVIGVWNAAKDEIQGKLILSLDRLNPIFMMQDSGARGNISN
                     FTQLAGMRGLMADPSGRIVELPITSNFREGLTVLEYFISTHGARKGLTDTALKTADSG
                     YLTRRLVDVAQDVIIREDDCGTDRGLTIKAIREGTEIIEPLEERLEGRYSRKTIRHPE
                     TKEVIARENDLITEAIATQIVDAGIEEVTIRSAFTCNTKHGVCKKCYGKNLATGTEVE
                     VGEAVGIIAAQSIGEPGTQLTMRTFHTGGVAGDDITQGLPRIQEIFEARNPKGQAIIT
                     EVGGEVVSIEEGRDRQQEITIQGTDDRRSYNIPYTARLRVEEGTIVERGEALTEGSVD
                     PKALIRVRDVLSVQEYLLAEVQKVYRMQGVEIGDKHVEVMVRQMLRKIRVMDTGDTNI
                     LPGTLMDIHTFTEANRDAILSGSQPATGRPVLLGITKASLETDSFLSAASFQETTRVL
                     TDAAIKGKRDELLGLKENVILGKLVPAGTGIGRYRKLKSEVIKETAEVTDEITNI"
     gene            8360..8905
                     /locus_tag="U0290_001958"
     CDS             8360..8905
                     /locus_tag="U0290_001958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2301997.1"
                     /translation="MITHVIWDMGETLNTVPNTRYDHHPLDTYPEVVLRENAEETLEK
                     VKQLGFKQAILSNTATSDTEVIKRVLTNFGIIDYFDFIYASNSELQPGKMEKPDKTIF
                     DFTLNALQIDKTEAVMVGNTFESDIIGANRAGIHAIWLQNPEVCLQDERLPLVAPPFV
                     IPVWDLADVPEALLLLKKISA"
     gene            8971..10431
                     /locus_tag="U0290_001959"
     CDS             8971..10431
                     /locus_tag="U0290_001959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463792.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2301998.1"
                     /translation="MTEVKKQFPKGFLWGGATAANQVEGAYDVDGKGLSTADMVKFIP
                     KEERTQDHALDVSKAEIEAIIAGKVEGRFPKRDGVDFYHHYKEDIALFAEMGFKTFRL
                     SLNWARIFPNGDDKEPNEKGLEFYDKVFDELLKYDIEPLVTLSHYETPLNLTLKYNGW
                     ADRRVIGFFTNYAETVFKRYKNKVKYWLTFNEINVISLSAYTGGGVLLEDAKNPLELS
                     YQAGHHQFVASALATKLAHEIIPGSQVGCMLARMATYPATNNPDDILKAQYENQQNLF
                     FTDVHARGEYPSYMNRFFQENDIHIVKEVGDDEILKAHTVDFISFSYYMSLSATASPE
                     GDRSAGNLMGGVKNEYLESSDWGWQIDPKGLRWTLNDLYSRYELPLFIVENGLGAYDT
                     VEEDGKIHDDYRIDYLRKHIEQMKEAIADGVDLIGYTSWGPIDLVSASTSEMSKRYGF
                     IYVDQDDWGKGTLERSRKDSFFWYKKVIETNGEDLD"
     gene            10705..12177
                     /locus_tag="U0290_001960"
     CDS             10705..12177
                     /locus_tag="U0290_001960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463793.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="InlB B-repeat-containing protein"
                     /protein_id="HEM2301999.1"
                     /translation="MKQRKTSLLHVLLVVTAILGISLWVNASHGMEAQAESIAQPAPI
                     NEIFTDPALAEAVKTELGKADVSDVVSQADLDQITKIDAEGKGISSLEGIQYLTNLNS
                     LSVTSNQISDISPLTNLTKLDSLYLGENQISDLTPLSRLTTLTFVQLSINQIKDVTPL
                     ANLTNLTYLDLRENQISDASPLVNMTNLTVLHLEKQQITADPVVYQTNLVAPDILKNA
                     YGEVVPPTTISNNGTFASPNITWNLDSFTSEVSYDFNQKITLGDNGKVTFAGTVVQPI
                     VEAPVNYITTFDVDGTTTTENVAVDSLITEPAAPTKEGYTFSGWYDAETGGNEWDFAV
                     DKMPATNMTLYAQFTINSYTAAFDVDGETTNQKVDYQALLQEPTAPTKDGYTFVGWYD
                     AKTGGNEWNFATDKMPAGDVTLYARFTKNASSDNSQIAPGNDDKNDKDNLTIKANDSA
                     NATSTKLPKTSDDSSMVPTVLGTLFIGGALLILRKKTTNI"
     gene            12311..13957
                     /gene="inlH"
                     /locus_tag="U0290_001961"
     CDS             12311..13957
                     /gene="inlH"
                     /locus_tag="U0290_001961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463794.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="InlH/InlC2 family class 1 internalin"
                     /protein_id="HEM2302000.1"
                     /translation="MKKRWNSVFKLVLMVAAILGISLYVTTSQGAEVRAESIAQPTPI
                     NVIFPDPALANAVKTATGKSNVTDTVTQADLDGIVTLSAFNTGVTTIEGMQYLNNLIG
                     LELKDNQITDLTPLKNLTKITELELSGNPLKNVSAIAGLQSIKTLDLTSTQITDVTPL
                     AGLSNLQVLYLDLNQITDISPLAGLTNLQYLSIGNTQVSDLTPLANLSKLTNLRADDN
                     KISDISPLASLPNLIEVHLKDNQISDVSPLANLSNLFIVTLTNQTITNQPVYYQNNLV
                     VPNVVKGPSGAPIAPATISDNGTYASPNLTWNLTSFINNVSYTFNQSVAFKNTTVPFS
                     GTVTQPLTEAYTAVFDVDGKQTSMTVGANELIKEPTAPTKEGYTFTGWYDAKTGGNKW
                     DFSTDKMPAENITLYAQFTINSYTASFDNDGKITTQKVTYQSLLEEPAAPTKAGYTFK
                     GWYDAKTGGTKWDFATGKMPAGNITLYAQFTKNDSPNPNDPTPNTPTGNGDGTSNPSN
                     SGGNTTLPTAGDENTMLPIFIGVFLLGTATLILRKSIKVK"
     gene            14153..>14459
                     /locus_tag="U0290_001962"
     CDS             14153..>14459
                     /locus_tag="U0290_001962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014600431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="internalin N-terminal domain-containing protein"
                     /protein_id="HEM2302001.1"
                     /translation="MKRNKTALRILVTLAVVMAISFWVGTSSKEEVQAAVIAQPTPIN
                     EIFTDENLANAIKATLNKPSTTSDVSQTELDSIRDVTAESSNIASLEGAQYLNNIDTL
                     "
BASE COUNT         4771 a         2760 c         2954 g         3974 t
ORIGIN      
        1 cgatgacaaa agttacttgt tggcaagagt aattcaatgt tttgcgccgg ggattccgca
       61 aatttattat gttggtttac ttgctggcaa aaatgatatt gaccttttag aagaaacgaa
      121 agaaggtcgt aatattaatc gtcattacta cacaatagat gaaattaaaa atgaagtaaa
      181 aagaccagtt gttaaagcgt tgtgcaattt actgagattt agaaatactt ctgaagcatt
      241 tgatttggaa ggaagtatag aaattgagac acctagctca aatgaaatcg ttattattcg
      301 caaaaacaaa acaaataaaa ttacagcgat attaaaagcg aatttaagta ctaaaacatt
      361 ccaaatcagc gaaaatgaaa ggaatatttt aatttaacat tttataaaca cgaatgagcc
      421 tcttcattcg tgtttatttc tattttctat tgacattggc taatggttat tgtattatta
      481 tataatgcca aaagaatcga aactgttttt ttgtgtttat tattaagcga aaatgctgtc
      541 gaaaatcaag catttgcaat cgattttggc aaaatagaag acatagatgt ggctttcaaa
      601 aatacaaaac ggtataaact ttttccgtct tgtactgaca cttttaagga aaattatttt
      661 ctagggagtt tcagcaatat gaaatccgct ttctttttgt ctaaatagaa tattttttgt
      721 gcgaaagttc cacttatgtt aactctggaa atgcttcttg gatgcgtgtt tgcaagccaa
      781 gattagaaac aaaaaggaaa attttgatgc acggtgttta agccagtata ttttgcacgt
      841 agcaaaaaac tgctagcgtc ttaaacctcg gatacggaag gttccattgt tttcgcaacc
      901 ataattaaca agtgtgctta taaatttttt aattaatttg aggggtgaat agtttgtcag
      961 gacattcagg acatgatgta aaatatggac ggcatcgtac gcgtagaagt tttgcgcgaa
     1021 tcagtgaagt acttgaatta ccaaacttaa ttgagattca aacagcttct taccaatggt
     1081 tcttagatga agggctacgt gagatgttcc gcgatatttc gccaattgag gattttgcgg
     1141 gtaatttatc tttagaattc attgattacg atcttggaga accgaaatac tcggtagaag
     1201 aatctaagaa ccgtgatgca aactatgcgg ctccactacg cgtgaagttg cgcctaatca
     1261 acaaagaaac cggcgaagtg aaagaccaag aagtatttat gggtgatttc ccactaatga
     1321 ctgaaatggg tacgttcatt attaatgggg cagaacgtgt tatcgtttcc caattagttc
     1381 gttctccagg tgtttacttc aatggaaaac tagacaaaaa tggtaaaaaa ggctttggtt
     1441 ctactgtcat ccctaaccgt ggggcttggc ttgagtatga aacagatgct aaagacgttg
     1501 tacacgttcg tattgaccgt acacgtaaat taccagtaac tgttttactt cgtgcactag
     1561 gctttggttc cgatcaagaa attattgatt taatcgggga caatgactac ttgcgcaaca
     1621 cactggaaaa agacaacact gacaatgctg aaaaagcact tctagaaatt tacgaaagat
     1681 tacgtccggg tgaaccccca acagttgata acgctagaag cttactagtt tctcgtttct
     1741 ttgatccaaa acgctacgat cttgcaagcg ttggacgtta taaaatcaac aaaaaattac
     1801 atctaaaaaa ccgtctattc aaccaaacat tagcagaaac tttagtggat ccagaaactg
     1861 gtgagattat cgcttctaaa ggtgacattt tggatcgtcg taatttagat caaattattc
     1921 ctaatttaga aaacggtgta ggtttccgca cacttcgtcc aactgatgga gttatggaag
     1981 atagcgtact cgttcaatct attaaaatct acgcaccaaa tgatgacgaa aaagaaatca
     2041 acatcattgg taacgcgtat attgaagaaa atgtaaaaca catcacgcct tctgatatta
     2101 tttcatccat tagctacttc tttaacttgc tacatggtgt tggcgataca gatgacatcg
     2161 atcacctagg taatcgtcgt cttcgttctg ttggtgaact tttacaaaac caattccgta
     2221 tcggtttatc ccgtatggaa cgtgtagttc gtgagcgtat gtctattcaa gatatgacta
     2281 caattacacc acaacaattg attaatattc gcccagtagt tgcttctatt aaagaattct
     2341 ttggtagctc gcagttatct cagttcatgg atcaaacaaa tccacttggc gaacttacgc
     2401 ataaacgtcg tctttcagcg cttggacctg gtggtttgac gcgtgaacgt gctggttatg
     2461 aagtacgtga cgtgcattac tctcactatg gtcgtatgtg tccgattgaa acgccagagg
     2521 gaccaaacat tggtttgatc aactcccttt cttcctttgc gaaggtaaat aaattcggct
     2581 ttatcgaaac gccttaccgc cgcgtagatc ctgaaacaaa ccgtgttact gataagattg
     2641 attatctaac tgcggatgaa gaggataatt acgtagtagc gcaagcgaac tcgaaattag
     2701 acgaacaagg tactttcaca gaagaagaag ttatggctcg tttccgttca gaaaacttag
     2761 cggtagaaaa agaacgtatt gactacatgg atgtatcgcc taaacaggtt gtatctgttg
     2821 cgacagcatg tattccgttc cttgaaaacg atgatagtaa ccgtgcgcta atgggagcga
     2881 acatgcaacg tcaagcagtt cctcttatgc accctgaagc tccatttgtt ggaacaggta
     2941 tggaacacgt atctgcaaaa gactctggtg ctgctgtaac tgccaaacat gacggtattg
     3001 tagaacacgt tgaagctcgc gaaatctggg ttcgtcgtgt atctctagtg gatggcaaag
     3061 aagtaactgg cggaattgat aaatatacat tacgtaaatt tgttcgttct aaccaaggta
     3121 cttgttataa ccaacgtcca aacgtagcag aaggtgaccg cgttgttaaa ggagaaatcc
     3181 ttggtaacgg tccatcaatg gattccggtg aacttgctct tggtcgtaac gtactagttg
     3241 cgttcatgac ttgggatggt tataactacg aggatgcgat catcatgagt gaacgtcttg
     3301 taaaagatga cgtttatact tcgattcata ttgaagaatt cgaatcagaa gctcgtgata
     3361 caaaactcgg acctgaagaa atgactcgtg atattccaaa cgttggggaa gatgctttac
     3421 gcgaccttga cgaacgtgga attatccgtg ttggtgctga agtaaaagac aacgaccttc
     3481 tagttggtaa agtaacacca aaaggagtta ccgaattaac tgcagaagaa cgtttattac
     3541 acgctatctt tggtgaaaaa gcacgtgaag ttcgcgatac ttcattacgt gtacctcatg
     3601 gcggcggcgg aatcgtgctt gacgtgaaga tctttacacg tgaagctggc gacgaactac
     3661 cacctggtgt aaaccaatta gtacgtgttt atattgtaca aaaacgtaaa atccacgaag
     3721 gcgataaaat ggccggacgt cacggtaaca aaggggttat ctcccgtatt ttacctgaag
     3781 aagatatgcc atttatgcca gacggaacac ctgttgatat catgcttaac ccactagggg
     3841 taccatctcg tatgaatatc ggacaagtac ttgagctaca cttaggtatg gctgctcgtg
     3901 ctttaggaat tcacgttgca acaccagtat ttgatggtgc gaatgaagaa gacgtttgga
     3961 gcacagtgga agaagctggt atggcccgcg atgcgaaaac aattctttat gacggacgtt
     4021 ctggtgaagc atttgataac cgtatctctg taggtgtaat gtacatgatc aaacttgccc
     4081 acatggttga tgataaactt catgcgcgtt caactggacc ttactctcta gtaacgcaac
     4141 aaccgcttgg tggtaaagca caatttggtg gacaacgttt tggtgagatg gaagtatggg
     4201 cactggaagc ttatggtgct gcttatacac ttcaagaaat cctaacgatt aaatccgatg
     4261 acgtggttgg tcgtgtgaaa acttacgaag cgattgttaa aggcgaaagc gttccagaac
     4321 ctggtgtgcc agaatccttc aaagtactca tcaaagagct tcaaagtctt ggaatggatg
     4381 ttaaaatgct ttccgcagac gaagaagaaa tcgagatgcg tgacatggat gatgacgact
     4441 ttactaatca aaatgatgcc ttcaatatcg tacaaccgga aaatacagcc gctgaaaaga
     4501 ctgagtaatt cggttcgata attgagactc caaaacaata agaaacaatg atttgttttt
     4561 tgcaaaatat aaaattaagc gatcgctaag actttacctg aaaagtctgg gaagtgtgcg
     4621 ggaatcccca agcgcttcct aaagcgaatg ctccaaacta atttaggagg ttgggcactt
     4681 gttagatgtt aataattttg agtatatgaa aatcggtctg gcatctccag ataaaattcg
     4741 ttcatggtct catggtgaag taaaaaaacc tgaaaccatc aactacagaa cgcttaaacc
     4801 tgaacgtgac ggcttattct gtgaaagaat ttttggacca atgaaagact gggaatgttc
     4861 ttgtggtaaa tacaaacgtg ttcgctataa aggcgtagtt tgtgaccgtt gtggagtaga
     4921 agtaacgaaa tcaaaagtcc gtcgtgaacg tatgggccat attgaactcg cagctcctgt
     4981 ttctcacatc tggtacttca aaggaattcc aagccgtatg ggtcttgtta tggatatgtc
     5041 cccacgtgca ttagaagaaa ttatctattt tgcatcttac gtggttacag aaccaggcga
     5101 tactccactt gaaaagaaac aacttttatc tgaacgtgaa taccgcgttt accgcgaaaa
     5161 atatggtaaa ggtttctcag ctggtatggg cgcagaagct atcaaaaaaa tcttagccga
     5221 tatcgactta gaaaaagaaa caaatgattt aaaagaagaa ctaaaatctg cacaaggtca
     5281 acgtcgtact cgtgcgattc gtcgtttgga agttatggaa gctttccgta attccggcaa
     5341 caacccaagc tggatggtac ttgacgtgct accagttatc ccaccagaaa ttcgtccaat
     5401 ggtacaactt gaaggtggcc gttttgcaac aagtgatttg aatgacttat atcgtcgggt
     5461 aatcaaccgg aacaaccgtt tgaaacgcct tcttgatcta ggtgcaccaa acattatcgt
     5521 gcaaaatgaa aaacggatgc tacaagaagc tgtcgatgct ctaattgaca acggtcgtcg
     5581 tggtcgtcca gtaacaggtc caggtaaccg tccgcttaaa tccctttctc atatgcttaa
     5641 agggaaacaa ggtcgtttcc gtcaaaactt actaggtaaa cgtgtcgatt attctggtcg
     5701 ttccgttatc gtagttggac ctaacttaaa aatgtaccaa tgtggtcttc caaaagaaat
     5761 ggcacttgaa ttattcaaac catttgttat gaaagaacta gttggacgcg gtttagcaca
     5821 caacattaag agcgctaaac gtaaaatcga acgtatggct ccagaaatct gggacgtatt
     5881 agaagaagtt atccgtgaac atccggtatt acttaaccgg gcgcctacgc ttcacagact
     5941 tggtattcaa gcatttgaac caacgctagt tgaaggtcgc gcaatccgtc ttcaccctct
     6001 tgtatgtaca gcttacaacg ctgactttga tggtgaccaa atggcggttc acgttccttt
     6061 atccgcagaa gcacaagcag aagcacgtat tttaatgctt gcagcgcaaa acattttgaa
     6121 ccctaaagat ggtaaaccag ttgtaacacc ttcccaagat atggtgctag gtaactacta
     6181 ccttacttta gaacgtgaaa atgctgtcgg tgaaggtact atcttcaaag atatcaatga
     6241 agcgcaactt gcgtatcaaa acggctatgt acacttacat tctcgtattg ctgtatttgc
     6301 tggctcgatt ccaaacgaac gtttcactga tgaacaacgc aaccaattat taattacgac
     6361 tgttggtaaa ctgattttca acacaatctt accaaaatcg ttcccttata ttaatgaacc
     6421 aacgaaattc aacttagaaa tcgaaacacc agctaaatat ttcgttgata ctacaacaga
     6481 tgtgcgtgct cacattgcgg cacaagaact aatcgatcca ttcaaaaaga aaatcctcgg
     6541 taacattatc gcggaagtct tcaagaaatt ccatattacc gaaacttcaa aaatgcttga
     6601 ccgtatgaaa gatcttggtt tcaaaatctc gactaaggcc ggtatgacag taggtattgc
     6661 ggatatctta acacttgaag aaaaacatga aattcttgaa aaagcacatg atacagttga
     6721 aaaaatcact aaatcattcc gtcgtggtct gattacagat gatgaaagat acgaacgcgt
     6781 tatcggtgta tggaatgctg ccaaagatga aatccaagga aaactgatct tgagtttgga
     6841 ccgcttaaac ccaatcttca tgatgcaaga ttccggagct cgtggtaaca tttccaactt
     6901 tacacagcta gctggtatgc gtggactgat ggctgaccca tccggacgta tcgtagaatt
     6961 gccgattaca tctaacttcc gtgaaggttt aacggtctta gagtacttca tttctaccca
     7021 tggtgcgcgt aaaggtctta ccgatacagc ccttaaaaca gccgattccg gttaccttac
     7081 tcgtcgtctt gttgacgtgg ctcaagatgt tatcattcgt gaagacgatt gtggcactga
     7141 ccgcggtctt acaattaagg ctattcgtga aggtactgaa atcatcgaac cacttgaaga
     7201 acgtctggaa ggtcgttatt ctcgtaaaac aattcgtcac ccagaaacaa aagaagttat
     7261 tgcacgtgaa aatgacttaa ttacagaagc aattgccact caaatcgttg atgctggtat
     7321 tgaagaagta actatccgtt ctgcattcac atgtaataca aaacacggcg tatgtaaaaa
     7381 atgttatggt aaaaacttgg caactggtac agaagtcgaa gttggagaag cagttggtat
     7441 catcgctgcc caatctatcg gggaaccagg aactcagctt actatgcgta ctttccatac
     7501 aggtggggtt gccggagacg atatcacgca aggtcttcca cgtattcaag aaatctttga
     7561 agcacgtaat ccgaaagggc aagctatcat cactgaagtt ggcggtgaag ttgtttctat
     7621 cgaagaaggt cgtgatcgtc aacaagaaat cactatccaa ggtacagatg accgccgttc
     7681 ttacaacatt ccttacactg ctcgcctgcg tgtagaagaa ggaactatcg tagaacgtgg
     7741 ggaagctcta actgaaggtt ctgtggatcc taaagccttg attcgtgttc gtgacgtatt
     7801 atccgttcaa gaatatctac ttgcagaagt acaaaaagtt taccgtatgc aaggggtaga
     7861 aattggcgat aaacacgttg aagtaatggt tcgtcaaatg ttacgtaaaa tccgcgtaat
     7921 ggatactggt gatacaaaca tcttaccagg tacattaatg gatattcata cgtttacaga
     7981 agccaaccgc gatgctatct taagtggtag ccaaccagca acaggtcgtc cagttcttct
     8041 agggatcaca aaagcttccc ttgaaactga ctccttcttg tctgctgcat cattccaaga
     8101 aacaactcgt gtcttgacag atgctgcaat caaaggaaaa cgtgacgaac ttctaggact
     8161 taaagaaaat gttatcctag gtaaacttgt tccagctggt acaggtattg gtcgttaccg
     8221 caaactgaaa tccgaagtta tcaaggaaac agctgaagta actgacgaaa tcacaaatat
     8281 ttaattttac aaagccaagt gtgccgttcg cgcgcacttg gctttttttg ttatactcta
     8341 gaaaaaggag tgaagtgatt tgattacaca tgttatttgg gatatgggcg aaacattaaa
     8401 caccgtacca aacacaagat acgaccatca ccctctcgat acttatccag aagtagtgct
     8461 acgggaaaat gccgaagaaa cgcttgaaaa agtgaaacaa cttggattca aacaagcaat
     8521 cctcagcaac actgcaacaa gtgacacaga agtaattaag cgcgtattaa ctaattttgg
     8581 tatcatcgat tattttgact tcatttacgc atccaattcc gagttacaac cagggaaaat
     8641 ggaaaaacca gacaaaacta tttttgattt cacactaaat gcccttcaaa ttgataaaac
     8701 ggaagcggtc atggtcggga atacattcga aagtgatatt attggcgcaa atcgtgcggg
     8761 aatccatgcc atatggctcc aaaatccaga agtctgcctg caagatgagc gcctgcctct
     8821 tgtcgcgccg ccatttgtta tcccagtttg ggacttagct gatgttcccg aagccctttt
     8881 actattaaag aaaatttctg cttgacctgt aatgcattac acagagtaaa ataaaaaagt
     8941 agaagaaatt agccggaagg ggcgaacgaa atgactgaag tgaaaaaaca atttccaaaa
     9001 ggatttttat ggggtggagc aactgctgcg aaccaagttg aaggcgctta cgatgtagat
     9061 ggtaaaggcc tttccacagc agatatggtc aaatttattc caaaagaaga acgtacacaa
     9121 gatcatgcat tagacgtatc taaagcagaa atcgaagcaa ttattgcagg gaaagtagaa
     9181 ggaagattcc ctaaacgtga tggcgttgat ttttatcatc actataaaga agacatcgca
     9241 ttatttgccg aaatgggctt taaaacattc cgcctatcac taaactgggc gcgtattttc
     9301 ccgaatggtg atgacaaaga gccgaatgaa aaaggccttg aattttatga taaagtgttt
     9361 gatgaattat taaaatatga cattgagcca cttgtgacac tttctcacta tgaaacacca
     9421 ctaaatctta ctttaaaata taacggctgg gctgatcgtc gcgttatcgg atttttcacg
     9481 aactacgcgg aaacagtttt caaacgttat aaaaacaaag taaaatattg gctaactttt
     9541 aacgaaatca atgttatttc acttagcgca tacactggtg ggggcgtgct attagaagac
     9601 gcgaagaatc cacttgaact ttcttaccaa gcaggacatc accaattcgt agccagtgca
     9661 cttgcaacaa aattggcgca tgaaattatt cctggatcac aagttggttg tatgttagcg
     9721 cgcatggcga cttatcctgc gactaacaat ccagatgata tcctaaaagc acaatatgaa
     9781 aatcaacaaa atctattttt cactgatgtc catgctcgcg gtgaatatcc aagctacatg
     9841 aaccgtttct tccaagagaa cgacattcac atcgtaaaag aagttggcga cgacgaaatc
     9901 ttaaaagcac acacagttga tttcatctca ttcagctact acatgtccct atccgcaaca
     9961 gctagcccag aaggcgaccg ctctgctggg aacttaatgg gtggcgtgaa aaatgaatac
    10021 ttggagtcgt ccgattgggg ttggcaaatt gaccctaaag gcttacgctg gacactaaat
    10081 gatctttata gccgctacga attaccactt ttcatcgtgg aaaatggctt aggtgcttat
    10141 gatacagtag aagaagacgg caaaatccat gatgattacc gaattgacta cttgcgcaaa
    10201 catatcgaac aaatgaaaga agcaattgct gatggcgtag atttaattgg atacacaagc
    10261 tggggaccta tcgacctagt aagtgcctcc acaagcgaaa tgtccaaacg ttacggcttc
    10321 atctacgtag accaagatga ctggggcaaa ggaacattag aacgctcccg caaagattca
    10381 ttcttctggt ataaaaaagt aattgaaaca aatggtgaag atttagatta ataggtagag
    10441 tacagccccg ctttggcggg gctgtttttt tacgctactt cccacaagaa accaatcccg
    10501 cactcactga acaaaaaaat tcgattaatc gccacatctt tcgcgcagaa gggtccaatt
    10561 cgggaaaaaa tggcgtgcat cttctgttat aattattcac caaagactag taatatttta
    10621 cgccaagtca tccaagatag tacagattca aggtgtattt aatgatggat tatctactca
    10681 gtcaaattat aaggagacga taaaatgaaa cagagaaaaa cctcattact acatgtttta
    10741 cttgtagtaa cagctatctt gggtattagt ttatgggtaa atgccagtca cgggatggaa
    10801 gctcaggcag agagtattgc gcaaccagcg ccaattaacg aaattttcac ggacccggca
    10861 ttagcagaag cggtgaagac agaacttgga aaagcagatg tttctgatgt agtaagtcaa
    10921 gcagacttgg atcagataac taagattgat gcagaaggga aaggaataag ttcgttagaa
    10981 gggatacaat atctaacaaa tctcaactct ttaagtgtaa cctccaatca gatttctgat
    11041 atttccccgc tgacgaacct tactaaatta gactctttat atttagggga aaatcaaata
    11101 agtgatttaa ctccgctttc aagattgacc actctgacat tcgtacaatt atctataaac
    11161 caaataaaag atgtgacacc tctagctaat ctaacgaatc taacttattt agatttacgc
    11221 gaaaatcaaa taagtgatgc aagtccttta gttaatatga ccaacttaac cgtattacat
    11281 ttagaaaaac aacagataac ggctgatcca gttgtatacc aaactaattt agttgcaccg
    11341 gatattttga aaaatgctta tggtgaggta gtaccaccga caacgattag taataacgga
    11401 acatttgcta gtccaaatat cacttggaat ttagatagtt tcacaagcga agttagttat
    11461 gattttaatc aaaaaattac acttggtgat aatgggaagg taacttttgc aggaactgtt
    11521 gttcaaccga tagtagaagc accggtcaat tacattacta catttgatgt ggacggaacg
    11581 acgacaacgg aaaatgtggc agtggattct ttaataaccg aaccagctgc gccaacaaaa
    11641 gaaggttata ctttctctgg atggtatgat gccgaaactg gtggaaatga atgggatttt
    11701 gcagtagata aaatgcccgc taccaacatg acgctctacg cccagttcac aataaatagc
    11761 tacacggcgg catttgatgt ggacggagaa acaactaatc aaaaagtaga ttaccaagct
    11821 ctactacaag aaccgactgc cccgacgaaa gatggctaca catttgtagg atggtacgat
    11881 gcaaaaacag gtgggaatga atggaatttc gcaacagata aaatgccagc gggtgatgtc
    11941 actttatatg ctagatttac taaaaatgct agctcagaca attctcaaat agcccccgga
    12001 aatgatgata aaaacgataa agataatcta acaattaaag ctaacgatag tgcaaatgcg
    12061 acgagcacta aacttccaaa aacaagtgac gattcaagta tggttcctac tgttttagga
    12121 acgctcttca tcggaggcgc attactaatc ttacgaaaaa aaactactaa catttaagat
    12181 aaagtagatt tggtttctat tttccgtaga gaccaaattt tttgttaatt aggtctaaaa
    12241 aagggtatct attattaatg atttatttag aacaattaat ggttttaatt taaataaaag
    12301 gagagagact atgaaaaaac gatggaattc tgtatttaaa ctagttttaa tggtagctgc
    12361 tattctcggt attagtctat atgtaacgac aagtcaaggg gcggaggttc gcgcggaaag
    12421 cattgcgcag ccaaccccaa ttaatgtgat tttccctgat ccggctcttg cgaatgcagt
    12481 taaaacagcg acaggaaaat ctaatgtaac agatactgtt acgcaagcag atttagatgg
    12541 aatagttact ttatcagcat ttaatactgg agtaacaacg attgaaggaa tgcagtactt
    12601 aaataatttg atagggttag aacttaagga taatcaaata acggatttaa ctcctcttaa
    12661 aaatttaacg aaaataacag aacttgaatt atctggaaac ccgttaaaaa atgtaagcgc
    12721 gattgctggg ttacaaagca ttaaaacgct agatttaact tctacgcaaa ttacagatgt
    12781 gactccactt gcagggcttt ccaatttgca ggtattatat ttggatctca atcaaataac
    12841 cgatataagc ccgcttgcag gactcactaa tttacaatac ttatcaatcg gaaataccca
    12901 agtaagtgat ttaaccccac ttgctaattt atctaaacta acgaatttaa gagctgatga
    12961 taataaaata agtgatattt cgccacttgc gagtttacct aaccttatag aagttcattt
    13021 gaaagataat caaattagtg atgtcagccc acttgctaat ttatcgaact tatttatcgt
    13081 cactttaacg aatcaaacaa ttaccaacca acccgtgtat tatcaaaata atcttgtcgt
    13141 tcctaatgtg gtaaaaggtc cttctggcgc tcctattgca cctgctacta ttagcgacaa
    13201 tggaacatat gctagtccaa atttaacatg gaatttaact agttttatta ataatgttag
    13261 ctacacgttt aaccaatcag tcgctttcaa aaatacaacg gttcctttca gtggcacagt
    13321 tacacaacca ttaacagaag cttatactgc ggtttttgat gtggatggaa aacaaacaag
    13381 tatgactgtc ggcgcgaatg aattaattaa agaaccaaca gcaccgacga aagaaggtta
    13441 cactttcaca ggctggtatg atgccaaaac tggcgggaat aaatgggatt tcagcacgga
    13501 taaaatgcca gcagaaaata tcacattgta tgctcagttc acgattaata gttatactgc
    13561 ctcatttgac aatgatggga aaataacgac gcaaaaagtc acttatcaaa gtttgttaga
    13621 agaaccagca gcaccaacga aagcaggtta tacgttcaaa ggttggtacg atgctaaaac
    13681 tggtggaact aaatgggatt ttgcgacagg aaaaatgcca gcaggaaata ttacgctata
    13741 tgcccaattc actaaaaatg atagcccaaa tccaaatgat ccaaccccta ataccccaac
    13801 aggaaatggt gatggtacaa gcaatccaag caattcagga ggcaatacta cacttccgac
    13861 agctggggat gaaaatacca tgctgcccat ttttatcgga gttttcttgt tagggacagc
    13921 aacgctaatt ctccgcaaat caatcaaagt aaaataacat cgaaaacagc tgcggtttat
    13981 agacttcagc tgttttatta gttaataaat tcatctaaac gtcacaacta atcatgaacg
    14041 ggtctaattt tagtgattaa acagaattct attaagttat aataaaataa ttcagctatg
    14101 agtacactca caatcctaaa aaatggaata atattataaa ggagataagt taatgaaaag
    14161 aaataaaaca gcattacgta tcttggtaac tctggctgta gtaatggcaa ttagcttttg
    14221 ggtagggacg agctcaaaag aggaagtaca ggcggcagta attgcacaac cgacgccaat
    14281 caacgaaatt tttacagatg agaatttagc aaacgcaata aaagcaacct taaataaacc
    14341 tagtactaca tctgatgttt cacaaacaga attagattct atacgtgatg taaccgcaga
    14401 aagtagcaat atagcttctt tagagggggc gcagtattta aataatatag atacattaa
//
LOCUS       DASDYO010000081        14370 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.081, whole genome shotgun sequence.
ACCESSION   DASDYO010000081 DASDYO010000000
VERSION     DASDYO010000081.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14370)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14370)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14370
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.081"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            324..857
                     /locus_tag="U0290_001963"
     CDS             324..857
                     /locus_tag="U0290_001963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581464.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3310 domain-containing protein"
                     /protein_id="HEM2302002.1"
                     /translation="MKIYHTETQEDFDALLEELKNEWYSWFFGEVIPSYDSELWERYK
                     QDTVVHIEEDGVSWGSLSYAKYLHPNTPIEKYKAKQDEVAKWFGGVTKAMKAFSSNGV
                     SMKNENNDKVNNPAHYTAGGIETLDYIKAKVSDYSSYAVGNILKYVSRYEHKNGIEDL
                     KKAQFYLNNLIEWMESD"
     gene            858..1013
                     /locus_tag="U0290_001964"
     CDS             858..1013
                     /locus_tag="U0290_001964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009930672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302003.1"
                     /translation="MFKTLSSFYFSMIFIIVLLRAFGFLSLAEAEFSLLLIISLVMVE
                     DMNGSRK"
     gene            1075..1302
                     /locus_tag="U0290_001965"
     CDS             1075..1302
                     /locus_tag="U0290_001965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917713.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302004.1"
                     /translation="MEEYVNISLDKYERLKMFENDKYEKDAKEFLKKFTNFTTIFGNQ
                     NEEYYTAHVNKEELKKLIEQRLGKTCEIEFY"
     gene            1315..1740
                     /locus_tag="U0290_001966"
     CDS             1315..1740
                     /locus_tag="U0290_001966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014930909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF722 domain-containing protein"
                     /protein_id="HEM2302005.1"
                     /translation="MSKRLRKAQYKLIEDELRYYHSTKKEILEKRANIVMGSIHQEFK
                     DENQGGGSSGQISNEVEQRVMLLQVDKEIQRMSDIVRAIDTVLSTLSDEDKQLIHFRY
                     WDRSRPTWLWIACKLNISESTAKRKRKEIIYKIAARLGY"
     gene            2320..2631
                     /locus_tag="U0290_001967"
     CDS             2320..2631
                     /locus_tag="U0290_001967"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEM2302006.1"
                     /translation="MHMTSKHYNLINTNQLMKFYKCKEWLSLRQEALKRDNYECQRCK
                     KKGKQRQADCVHHIKYVKEFPAFALTLSNLECLCNQCHNEEHERLPNQQEKKIINQER
                     W"
     gene            2637..2909
                     /locus_tag="U0290_001968"
     CDS             2637..2909
                     /locus_tag="U0290_001968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302007.1"
                     /translation="MLFDIDGIEYNTDDYEQYDMYKQSVVRNVMYKAYRSLRSVVSDN
                     KCQGLKQKEVKEKINNNRSQVYQLLSFTDEEINSIFIFIEKYFPRI"
     gene            3014..3376
                     /locus_tag="U0290_001969"
     CDS             3014..3376
                     /locus_tag="U0290_001969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734883.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase"
                     /protein_id="HEM2302008.1"
                     /translation="MSFMQLKEGKELITARNKIEKDLKQQLKDKNLTSPIYEDRVNAY
                     LYYWDMEQNLLRDINERGFYVEYDNGGGQKGTRKNDSALLLQKYTKQAMDILQFLSLK
                     PPSESVKNIGSEPHDPAL"
     gene            3360..5012
                     /locus_tag="U0290_001970"
     CDS             3360..5012
                     /locus_tag="U0290_001970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038330181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="terminase large subunit"
                     /protein_id="HEM2302009.1"
                     /translation="MTQLSNVYKWHPAISEWMRMVENDEVENCKEQKLLMKYVRGRLE
                     QKNVIIEHNILDTAIATAERYFYKLFPFQKFIYAFVFAVFEIDEDGDKQLMFNDYFIY
                     AGRGFGKNGLLSCMIFECTTKNHGVDHYNIDIVATSEDQAKTSFEDIYNMLEENKDTM
                     KNVYRWNLVAIQHRKNGSTIKYKTSNARTKDGSRPGAVAFDEEHAYEDYSNYAVHTSG
                     LGKKERSRRFHLTTDGYVRGSVLDDRKVLAQQVLNGEKPNSKMFPFICKLDSPDEVQN
                     KTKWAKANPMILYYKPLRIEIDQHWDDAQSSSEIMVEFMTKRMNCPTQDPTTVAVKWD
                     DIKATNQPMPSLKMAPAIGGIDFADVRDFCAVGLLFKKEGKYIFKHHTFICAESLKIT
                     KFKFPIHEAVEKGLATIIHDNYIDEDYPLQWFLEQAKEHRIINIATDSFRYKSLKEAF
                     TSAGAPLIQVRSGPYSHNRLSSMVDKLFASHKIIFGDDMLMRWYCNNVAIKFDARGEK
                     TYIKIEPKTRKTDGFFALLHTLMLDEELPETREIKLYDVTTY"
     gene            5026..6213
                     /locus_tag="U0290_001971"
     CDS             5026..6213
                     /locus_tag="U0290_001971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage portal protein"
                     /protein_id="HEM2302010.1"
                     /translation="MGFKSWVSGFFNEEQRTLNLTDTVWCSIPSEKLKELSIKKWAID
                     SCANKIANTLSCAEVLTYEKGEEVRKKNWYMFNVEANQNQNATEFWKKAIYKLVYDNE
                     ALIFMQDEYIYVADSFTKNDKSLYENTYTEVTLKDLTLKKEFKESEVLHLTLNNESIK
                     SIIDGFYLLYGDLLTAAVNKYKKLNSRKIIVKLKAMFGQTPEAEEKLRLMLSERMKKF
                     LAEGDSALPVEDGMEIDELAGDSKIAESRDIKKMIDDVFEMVANSFNIPLGLAKGDTV
                     GLSEQVNSFLMFSINPIAEMFTDEGNRKFYGRDSVLERTYMKLDTTRIKVQDIQEIAS
                     SMDVLFHIGVNTIDDNLRMIGREPVMSPETQERFVTKNYAPLGENEEDLKGGDINENK
                     GDS"
     gene            6191..6937
                     /locus_tag="U0290_001972"
     CDS             6191..6937
                     /locus_tag="U0290_001972"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Clp protease ClpP"
                     /protein_id="HEM2302011.1"
                     /translation="MKIKEIPKIESRLEFKNSSENPEIADLYLYGSIGSGWFDDITSS
                     EVQNFLKTSSVSQINVHVNSGGGDVFESIAIHNLLKAHPAKISIYIDALAGSGASVIA
                     MAGDEIIMPSNAMMMIHKAWTIAAGNADEFRKVANDMDKIDHAVTESYTERFVGEREE
                     LVTLLTNEEWLTAEECVTLGFCDSIGEIELNEEEQVTENSNEAVTVASIVDKYKVVAS
                     TENKAIQTKNNIFKSIANRSDAFLLGGNDK"
     gene            6934..8106
                     /locus_tag="U0290_001973"
     CDS             6934..8106
                     /locus_tag="U0290_001973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage major capsid protein"
                     /protein_id="HEM2302012.1"
                     /translation="MNNLDKKDSETLNISTAFLNAIKEGATEAEQVTAFTNMAEQIQN
                     NIIAQARKEVNREMNDNNVLASRGANALTSDESKYYNEVIAGNGFAGVTALLPPTVFE
                     RVFEDLTVEHPLLSKINFVNTTATTEWIISVGDVATAWWGPLCAEIKEVLDNGFDKIQ
                     TGMYKLSAYIPVCNAMLDLGPSWLDQYVRTILGEAMALGLEAGIVNGSGKDQPIGMMR
                     DLNNVTAGEHPVKTATPLTDLTPATLATKVMLPLTDNGKKSVSDAILVINPADYWSKI
                     YAATSYMTPQGVWVTGILPVPLEIVQSVAVPVGKAVAGRAKDYFMGIGSEQVIRTSTE
                     YRLLDDETLYYAKQYANGRPKDNSSFLVFDITGLEGSPAIDVNVVNNATPSETPAE"
     gene            8129..8248
                     /locus_tag="U0290_001974"
     CDS             8129..8248
                     /locus_tag="U0290_001974"
                     /inference="COORDINATES: protein motif:HMM:NF020688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302013.1"
                     /translation="MKVVELKEELDKRGITYNTSDLKSDLILKLEEDDLNAGV"
     gene            8235..8528
                     /locus_tag="U0290_001975"
     CDS             8235..8528
                     /locus_tag="U0290_001975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302014.1"
                     /translation="MQVSDELLQEVKDYLHITWSDETEDKRIRKIIERVSARISQLTG
                     VSFTFEKEDAAKQLLFDGVRYVNNNSYEYFQQNFICEIQSLQFDVAVNINAEG"
     gene            8515..8853
                     /locus_tag="U0290_001976"
     CDS             8515..8853
                     /locus_tag="U0290_001976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage head closure protein"
                     /protein_id="HEM2302015.1"
                     /translation="MQKVNHDTFNDGVLFYGISETLRDSNRKRIGTNFVSKGKLFYEE
                     VSMRDQDVMRINAMGKDLNLKIKTHYRKEATSYQKIQIEGVQYEVSYIDKDRNVRLFW
                     YLTRSGDENE"
     gene            8846..9256
                     /locus_tag="U0290_001977"
     CDS             8846..9256
                     /locus_tag="U0290_001977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302016.1"
                     /translation="MNEATKERITKLNEYLITKLSENTGLNVYQDNVSETELNEEMNG
                     VYDYIIFSTGGFSKSDTSQFTLIQEVTVQVATENTSDLDGLQIDIITSLEGTGGAGPY
                     YFLNSTKGQVQKGQQDGYVDALELIFTRSFKYVC"
     gene            9246..9668
                     /locus_tag="U0290_001978"
     CDS             9246..9668
                     /locus_tag="U0290_001978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734891.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302017.1"
                     /translation="MCAKWSLEFSDVERLSNLISQIPNKSEAIINKTLETKAVPLVKL
                     NIEKRINLSKNWKGQLLNKNHAQSSGPFNVKMGNLGFELLTKPKFNYLIFPDQGIGKH
                     NKTKQDFMQLGVEESSQEIVEMLEQAVFKEINDTLGGK"
     gene            9670..10248
                     /locus_tag="U0290_001979"
     CDS             9670..10248
                     /locus_tag="U0290_001979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734892.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2302018.1"
                     /translation="MATIVEDFDATRVTNVGTKFTGDTASIAFGCLGSIEGETELLEL
                     VKKCEGVETKKKTTPQKMTLTLTGHVKVDVLRDIFGLSNEGLKVGVYSYGADSLSKPF
                     ILTADVLDEFEAQTKLIAFSNCVAATGLKVTVENGADEVAEIELEFTAMIDDNRKCYY
                     EAIVSELDATGRDAFVKQWHTNFTPEMVVATP"
     gene            10369..10731
                     /locus_tag="U0290_001980"
     CDS             10369..10731
                     /locus_tag="U0290_001980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038330192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302019.1"
                     /translation="MEFTIDFLDGTKAQLDSNVTMLTLYRLQNEGEGAVDGKFLKGFM
                     QKEADLDPISIAQAMYAAYRQATDKKKAKNFEEFMENYQMDLEIDMQIYFAIVTKRAR
                     DEFAKQFKKKTGSSKGKK"
     gene            10914..13994
                     /locus_tag="U0290_001981"
     CDS             10914..13994
                     /locus_tag="U0290_001981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail tape measure protein"
                     /protein_id="HEM2302020.1"
                     /translation="MANNQAKVTFKVFNQDFNRAMAEMNADSKKLRQELKLEQEQLKN
                     TGSETDKLAADLNGLQKQYDVASQKTKETAQQLEKVKTKFGENSTEASRMESALKSAQ
                     ITEQQLANKIELTTDALEKAKSAETGRVASLNKLQSEQSNLEAQSEKLASEYKLESAA
                     MEGTATEAEKLARAEKYLADQTNVAEQKIKNMEQQLELVKQEYGENSTEALKMETSLN
                     EAKMSVSKLGNELTEFKNDSNNAGQGMDELNNKMSGAVMMEAAEHIAAVGEKLKEIGQ
                     YALEAFREVDEGLDTIITKTGATGKAGEDLSNVFDNIAGNSKFEFQQIGDAVGELNTQ
                     FGFTGKELEKNSMKLLKFSDINGSDVTNSTMKAKQALEAYGLENKDLSMVLDSVTYVA
                     QGTGQSVDDIFDKAVKGAPQIEALGLSFADGAQLMGNLDKAGVDSSATLSSLTKASVV
                     YAKENKTLAQGLSELEGKISGAKTETEKINLAAEVFGSKGAPRMVKAIEDGRLSLDGL
                     AGTAEMASGTVSKIFEATLDPIDRQDVALNNVKMAMADLGNSIAEVLAPILDALSSVL
                     QKVSEWFNGLPAPVRQVTVVIGLLLIGFTALLPVITAIVAMIGILGTAMLGVVGIIAA
                     IVAGIAILVVGFKWLWDNCEGFRNFWIGLWEWIVAAFKAAWEYIQPGLQSIGDALKKF
                     WEEYGPTIIGALQAVWDFIVGFVAWLEPLWTFLWEGLKSTLKFAWDAILAIVQFALDY
                     LGGLIDFWAGIFTGDWDRVWKGIQEMTSAALEAIKGIFFALVRWIDNILKSLGIDMGA
                     IWKSITDATKTAWKWISDYIVNPIRDANNRAKLILAAFKAAFKITFDVIRDNIANTWS
                     KVEDKIIKPVKNAYDKVKNIVDDIKDTFKNLKIKFPKIEMPPMPHFSLKGKFSLKEMT
                     VPKLDVSWHKNGGFFNSASVIGIGEAGPEAAVPLVGKRMDPFADAVSNRMLSSLPSMA
                     QGKISENNNDVKVEINMNNNLYGAADEDRLVNKVKREITNSMNSKTTAWGGRTS"
     gene            13991..>14370
                     /locus_tag="U0290_001982"
     CDS             13991..>14370
                     /locus_tag="U0290_001982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2302021.1"
                     /translation="MNYQIFIDDVSCNDYDLCVAERPLLKTPEQDVEIREIRGRNGAF
                     IIPFAYKNVEEEISFNFLDDSKSFKQLFREAKRYFMNGKNLVFSDDPHVYRKIVHVSF
                     SDAENTVLEYGFFNVIFTLDPFQYA"
BASE COUNT         5171 a         1998 c         3038 g         4163 t
ORIGIN      
        1 gtacaaaaat aaaaactttt tcgccgattt ttttgtaacc tgtaaccacg ttctgtcaga
       61 agggatttga gtggttacgt gttacaaaat gggttttgta acggtatagt cggcggaaaa
      121 tggagggatg acattgatga aaagatttct tgttatatgt ggaaatcaag cagataggaa
      181 atatgataat ggtagcaggt agtattgctt ttatacctgg agtgtttttt ggagttttgt
      241 tggtgatatt gtttgcccca atgccgcact tatctaaatc acataattcg ccgagtacac
      301 aattaaacaa ggaggaaaaa cgaatgaaaa tatatcacac agaaacacaa gaagattttg
      361 atgcattgtt ggaagaattg aaaaatgaat ggtatagctg gtttttcgga gaggttattc
      421 cgtcatatga ctcggaactt tgggaacggt ataagcaaga tactgttgtg catatagagg
      481 aagatggagt aagttggggg agtctttctt atgctaaata tttacacccc aacacaccaa
      541 ttgaaaaata caaagcgaaa caagacgaag ttgcaaagtg gttcggtggc gttacaaaag
      601 ccatgaaagc attttcatcc aatggagtat ctatgaaaaa tgaaaataac gacaaagtaa
      661 ataatcctgc acattacaca gcaggtggta ttgaaacact agactacatc aaggcaaaag
      721 tatctgatta ttcgtcatat gctgtaggaa acatacttaa atatgtctca agatacgagc
      781 acaagaatgg cattgaggat ttaaaaaaag cgcaatttta tttaaataat ttgattgaat
      841 ggatggagag tgattgaatg tttaaaacat taagttcatt ttatttttct atgattttca
      901 ttatcgtatt attgcgcgct ttcggctttc ttagtcttgc agaagcagaa tttagtttac
      961 tattaatcat ttctcttgtc atggttgagg atatgaatgg gagtcgtaaa tgacaagtga
     1021 ctcttcgcct ttacaagtat tgctaaaata taaaaaaatt ggggctggtt gacaatggag
     1081 gaatatgtaa atatcagttt agataaatat gaaaggttaa aaatgtttga aaatgataaa
     1141 tacgaaaaag atgctaagga atttctaaaa aagtttacta acttcacaac gatatttgga
     1201 aatcaaaatg aagagtatta cacggcgcat gtcaacaagg aagaactgaa aaaactaatt
     1261 gaacaaagac taggcaaaac gtgtgagata gaattttatt aggagagtga ttaaatgtca
     1321 aaacgattac gtaaagcaca atataaactt attgaagatg aacttcgtta ctatcattct
     1381 acaaaaaaag aaatactaga aaaacgtgca aacattgtca tgggatctat acatcaagaa
     1441 ttcaaagacg aaaaccaagg cggtggttca tctggtcaga tatcaaatga agtagaacaa
     1501 cgtgttatgc tattacaagt cgataaagaa atacaaagaa tgtctgatat tgtcagagca
     1561 attgatacgg tattgagcac tttgtctgat gaagataagc aactgattca ttttagatac
     1621 tgggatagga gtagacctac ctggttgtgg attgcttgta agttgaatat cagtgaaagt
     1681 acggctaaaa gaaaacggaa agagattata tataaaattg ccgcgcgatt aggttattaa
     1741 aaaagttgac ccgtttatga cccgtttgac atgtttttcc atgttaatat tatagagtag
     1801 agaagtgaag atgattacaa aataaaataa tatattaagt ctgcacttca cttctcatat
     1861 ataatcacat gatgatgata tagcaggagg ttgctatgtt gccggacaga ggcttattat
     1921 ctgatcgttg gtcttgatgg gagacgcatc ccattccaat ctcactagtc ccaacaagag
     1981 acaccttctt gttcaatctc aatactcgtg acggaacagg tagacgttat ggatgagtcc
     2041 tatatcacgc ttcggcttga tgttgcaagg tgcaaatcct tgccgagtat atttaaacga
     2101 caataccttc tctctattta atagcagata tgttctgatg ggaaggcttt ataatttccg
     2161 ctttctgacg tccgcgagcc cgtctgaggg ttaattagaa gaaagacaaa gcattgacga
     2221 atgctaccgt agaagtccgc ctggttttat aactacggat acatagaaca atgaagtcca
     2281 gcacattagt gttgggcttt ttatataggg gtaatacata tgcatatgac atctaaacat
     2341 tataacttaa tcaatactaa tcagttgatg aagttttata aatgcaaaga gtggttgtct
     2401 ctcaggcaag aggcattgaa gcgtgataac tatgaatgcc aacgatgcaa gaagaaaggt
     2461 aagcaacgtc aagcggactg tgtacatcat attaaatatg taaaagagtt tcccgctttt
     2521 gcgttaacat taagtaatct cgaatgttta tgtaatcaat gtcataacga agagcatgag
     2581 cgtttgccta atcaacaaga gaagaagatt attaatcaag aaagatggtg atgtgattgt
     2641 tatttgatat tgatggaatt gagtacaaca cagatgacta tgaacaatat gatatgtata
     2701 agcaaagtgt agtgcgcaat gtgatgtata aagcatatcg ttcgctgcgg tctgttgtgt
     2761 ctgataacaa gtgtcaaggt ttgaagcaaa aagaagtgaa agaaaaaata aataataata
     2821 ggtcgcaagt gtatcagttg ctttcattta ctgatgaaga aataaattct atttttattt
     2881 ttattgaaaa atattttcca cggatttaat accccccggg taaaaatttt aaaacttttt
     2941 gagagggtgt gacaacgtgg gagagtagcg ccaaaaaatg caacgttaaa ttttcacatg
     3001 agggggtggt attgtgtcgt tcatgcaatt gaaagaagga aaagagttaa taactgcaag
     3061 aaataaaatt gaaaaagatt taaaacagca attaaaagat aaaaatctaa ctagtcctat
     3121 ttatgaagat agagtaaatg cttatctgta ttattgggat atggaacaga atctattaag
     3181 agatattaat gagcgtggtt tttatgttga atatgacaat ggtggtggtc aaaaaggcac
     3241 ccgtaaaaat gatagtgcat tattacttca aaaatacact aaacaagcaa tggatatttt
     3301 acaatttcta tctctaaaac caccgtctga atcagtaaag aatattggaa gtgaacctca
     3361 tgacccagct ctctaatgta tataaatggc atccagcaat ttcagaatgg atgcgtatgg
     3421 ttgaaaatga tgaagtagaa aactgtaaag aacaaaaatt attaatgaaa tatgtcagag
     3481 gtaggttaga acaaaaaaat gtaatcatag aacataatat tttagatacc gctattgcta
     3541 cggcagagcg gtatttttat aaactttttc cgttccaaaa attcatatat gcatttgtat
     3601 ttgctgtatt tgaaatagat gaagatggcg ataagcaatt aatgtttaac gattatttta
     3661 tttatgctgg tagaggtttc ggtaaaaatg gtttattaag ttgcatgatt tttgaatgta
     3721 caactaaaaa tcatggagtg gaccattaca atatcgatat tgttgcgaca tcggaagacc
     3781 aagcgaaaac aagttttgaa gatatttata atatgttaga agaaaataaa gacacgatga
     3841 aaaacgtcta tcgctggaat ttagttgcaa tacaacatcg aaaaaatgga tcaacgatca
     3901 aatataaaac atcaaatgca agaacaaaag atggttcaag acctggtgca gttgcctttg
     3961 atgaagaaca cgcatatgaa gattattcaa attatgcagt acacacttct ggattaggta
     4021 aaaaagaacg gtcacgtaga ttccatttaa cgaccgatgg ttatgttcgt ggaagtgttt
     4081 tagatgacag aaaagtatta gcacaacaag tgttaaatgg agaaaagcca aactcaaaaa
     4141 tgttcccttt catttgcaag ttggatagtc cggacgaagt tcaaaataaa acaaaatggg
     4201 caaaagcaaa tcctatgatt ttatactaca aaccattgcg aatagaaatt gaccaacatt
     4261 gggatgatgc gcaatcatct tctgaaatta tggttgagtt tatgactaaa agaatgaact
     4321 gtccaactca agatccaacc actgtagcag taaaatggga tgatattaaa gcaacaaatc
     4381 aacctatgcc atcgttaaaa atggctccag cgattggagg tatcgatttt gcggatgtta
     4441 gagacttttg tgcggtaggg ttgttattta aaaaagaagg taagtatatc tttaaacatc
     4501 atacattcat ttgcgctgag tcattgaaaa tcacgaaatt taaatttccg attcatgaag
     4561 cagtggaaaa aggactggca actatcatac atgataatta tattgatgaa gattatccac
     4621 ttcaatggtt tttagaacaa gcgaaggaac accgcataat aaatattgca acagatagct
     4681 tcagatataa atccttgaaa gaagcattta cgagtgcggg tgcgcctctg attcaagtcc
     4741 gttctggtcc atattcgcat aacagattat caagcatggt agataaacta tttgcctcgc
     4801 ataaaataat ttttggcgat gatatgctga tgcgctggta ctgtaacaat gtagctatta
     4861 agtttgatgc gcgtggtgaa aaaacatata taaaaattga accgaagaca cgtaaaacgg
     4921 atggtttttt tgctttgctg catacactaa tgcttgatga agaattgcca gagacacgag
     4981 aaataaaact gtatgatgtg actacgtact aggaggtgat aaatattggg attcaaaagt
     5041 tgggtgagtg gattttttaa tgaagaacaa agaacattga atttaacgga cacggtatgg
     5101 tgttctattc cttctgagaa actaaaagaa ttgtctataa agaaatgggc aattgattct
     5161 tgtgctaata aaattgccaa cactctatct tgtgcagagg tactcaccta tgaaaaaggt
     5221 gaagaagtcc gtaaaaaaaa ttggtatatg tttaatgttg aagcaaatca aaatcagaat
     5281 gcaactgagt tttggaagaa agcaatatac aaacttgtat atgataatga agctttgata
     5341 tttatgcaag atgaatatat ttatgtagct gatagtttta ctaaaaatga taaatcactg
     5401 tatgaaaaca catatacaga agttacttta aaagacctca cattaaaaaa agaatttaaa
     5461 gaatcagaag ttttacatct tactttgaat aatgaaagta ttaaatccat catcgatggg
     5521 ttttatttgc tttatgggga tttattaact gctgcggtta ataaatataa aaaattaaac
     5581 tctagaaaaa taatagtaaa actaaaagcg atgtttggac aaactccaga ggcagaagaa
     5641 aaattgagac ttatgctatc tgagagaatg aagaagtttt tagcagaagg tgactctgct
     5701 ttacctgtcg aagatggaat ggaaatagac gaacttgcgg gagattctaa aatagcagaa
     5761 tcaagagata taaaaaaaat gattgatgat gtttttgaaa tggttgcaaa tagttttaac
     5821 attccacttg gtttagcaaa aggagacaca gtgggcttaa gtgaacaggt taattcattc
     5881 ttaatgttta gtataaatcc tatcgctgag atgtttaccg atgaaggaaa cagaaagttt
     5941 tatggtaggg attcggtttt agaaagaacc tatatgaaat tagatactac aagaattaag
     6001 gttcaagata ttcaagaaat tgcgagttca atggatgtgc tgttccatat cggtgtaaat
     6061 acaatagatg ataatttaag aatgattgga cgtgaacctg tgatgagtcc agaaactcaa
     6121 gagcgttttg ttacaaaaaa ttatgcacct ttaggtgaga atgaagaaga tttgaaaggg
     6181 ggtgacataa atgaaaataa aggagattcc taaaatagaa agtcgattag agtttaaaaa
     6241 cagctctgaa aacccagaaa tcgcggactt gtatttatac ggatcaatag gtagtggctg
     6301 gtttgatgat attacgtcta gtgaagtaca gaatttttta aaaacatcta gcgtctctca
     6361 aataaatgta catgtcaata gcggtggtgg agatgttttt gaatccattg ctattcataa
     6421 tctattaaaa gcacacccag ctaaaatcag tatttatatt gatgctcttg ctggaagtgg
     6481 tgcatctgta attgcaatgg caggtgatga aattattatg ccaagcaatg caatgatgat
     6541 gattcataaa gcctggacaa tagcagctgg taatgcagat gaatttagaa aagttgcgaa
     6601 tgacatggac aagattgacc atgcagtgac ggaaagttat acagaacgct ttgttgggga
     6661 gcgtgaagag ttagtaacat tacttactaa cgaggaatgg ttaacagctg aagaatgtgt
     6721 gacacttggt ttttgcgatt ctattggtga aattgaatta aatgaagagg aacaagttac
     6781 tgagaattca aatgaagcag taacagtagc aagtatagtt gataaatata aagtagttgc
     6841 atcaactgaa aacaaagcaa ttcaaacaaa aaataatatt tttaaaagta tcgcaaatag
     6901 aagcgatgct tttttattag gaggaaatga caaatgaata accttgataa aaaagattca
     6961 gaaacattga acatcagcac agcattttta aacgcaatta aagaaggcgc gacagaagcg
     7021 gagcaagtaa cagcgtttac aaacatggct gaacaaattc aaaacaatat tatcgctcaa
     7081 gctcgtaaag aagtaaatag agaaatgaat gataataatg tactcgctag ccgtggtgcc
     7141 aacgctttaa caagtgatga aagcaaatac tataatgaag tcattgcagg aaacggtttt
     7201 gctggagtta ctgcattact tccacctacc gtttttgagc gtgtgtttga agatttaacg
     7261 gtggaacatc ctctattaag taaaattaat tttgttaata ctactgcaac aacggaatgg
     7321 attattagtg ttggtgatgt cgcaactgct tggtggggtc ctttatgtgc cgagattaaa
     7381 gaagttttag acaatggttt tgataaaatt caaactggaa tgtataaatt atctgcttat
     7441 attccggttt gtaatgcaat gctcgattta ggaccgtcgt ggttagatca atatgttcgt
     7501 actattttag gtgaagcaat ggcgcttggt cttgaggctg gtattgttaa tggttccggg
     7561 aaagaccaac caatcggaat gatgcgcgat ttgaataatg ttacggctgg ggaacaccca
     7621 gttaaaaccg caacacccct gaccgatttg acaccagcta cactagcaac aaaagtaatg
     7681 ttacctctga cagacaacgg aaagaaatct gtcagtgatg cgattcttgt tataaatcca
     7741 gctgattact ggagcaaaat ctatgcggca actagttaca tgacgcccca aggagtttgg
     7801 gtgacaggta tcttaccagt tccacttgag attgttcaat cggttgcagt gcctgtcggt
     7861 aaagcagtag ccggtcgtgc taaggattac tttatgggaa ttggttcaga gcaagttatt
     7921 cgcacatcaa ctgaatatcg tttattagac gatgaaacac tctactatgc taagcaatat
     7981 gcgaatggtc gacctaaaga caattcttct ttcttagtat tcgatattac aggtctagaa
     8041 ggttcgcctg ctattgatgt gaatgtagtg aataacgcga caccctccga aacccctgct
     8101 gaataaagcg gggaataact attctactat gaaagttgta gagttaaaag aagaactaga
     8161 taagcgagga atcacatata acacttcgga tttaaaatct gacttaatat taaagttaga
     8221 ggaggatgat ttaaatgcag gtgtctgatg aattattaca agaagtaaaa gactacttgc
     8281 atattacttg gtctgatgaa acagaagaca aacgtataag aaaaatcatt gaaagagtat
     8341 cggcacgcat tagtcaactg actggcgtgt cttttacttt tgaaaaagaa gatgctgcga
     8401 aacaattgct tttcgatggt gtgagatatg taaataataa ttcttatgaa tactttcaac
     8461 aaaactttat ttgtgaaatt caaagcttgc aatttgatgt ggcggtgaat attaatgcag
     8521 aaggttaatc atgacacttt taacgatggt gtcttgtttt atggaatatc ggagacactt
     8581 cgcgactcta acaggaaacg aataggaaca aattttgtca gtaagggcaa gttgttttat
     8641 gaagaggtat ctatgcgtga tcaagatgtt atgagaatca atgcaatggg aaaagattta
     8701 aatttaaaaa ttaaaactca ttatcgaaaa gaggcaacat cttatcaaaa aatccaaatt
     8761 gaaggtgttc aatatgaagt aagttatata gataaagaca gaaatgtgcg tttattttgg
     8821 tatttaacta ggtcaggtga tgaaaatgaa tgaggcgaca aaagagagaa ttacaaaatt
     8881 aaacgagtat ttaatcacga aacttagtga aaacacaggt ttaaatgttt atcaagataa
     8941 cgttagcgaa acagaattaa atgaggaaat gaatggtgtt tacgattata tcattttttc
     9001 cactggtgga ttttcaaaaa gtgacacctc acaattcaca ttgatacaag aagtaacagt
     9061 tcaagtagca acagagaata ctagtgattt ggatggattg caaattgaca taattactag
     9121 tttagaagga accggtggag ctggtcctta ttattttttg aactctacta aaggtcaagt
     9181 tcaaaagggg caacaagatg gctatgtaga cgcactggaa ttaatcttta caaggtcatt
     9241 taaatatgtg tgctaaatgg tctttagagt tttcggatgt tgaaagattg tcaaatttga
     9301 ttagtcaaat tccaaacaaa tctgaagcta ttattaataa aacacttgag acaaaagcag
     9361 ttccacttgt gaagttaaac atagaaaaaa gaataaatct ttctaaaaat tggaaaggtc
     9421 aattgcttaa taaaaatcat gcgcaatcgt ctggaccttt taatgtgaaa atgggaaatt
     9481 tggggtttga attattaaca aaacctaaat tcaactattt aatttttcca gatcaaggga
     9541 ttggaaaaca caataaaaca aaacaagact ttatgcaatt aggtgtagaa gaatcatctc
     9601 aagaaatagt agagatgtta gaacaagcag tatttaaaga aataaatgat accttaggag
     9661 gtaaataaaa tggcaacaat tgttgaagat tttgatgcaa caagagtaac aaatgtaggt
     9721 acgaaattca ctggtgatac tgcaagtatt gcatttgggt gtctaggttc tattgaaggt
     9781 gaaacagagt tactcgaatt agtaaaaaaa tgtgaaggtg ttgaaacgaa gaaaaaaaca
     9841 acgccccaaa aaatgacact gacgttgaca ggtcatgtaa aagtagacgt gttacgagat
     9901 atttttggtt tatcaaatga aggtttgaag gtaggagttt actcgtatgg tgctgacagt
     9961 ttaagtaaac catttatttt aacagcggat gtgttagatg aatttgaagc gcaaacaaaa
    10021 ttaattgcat tctcaaattg tgtggcggca acaggattaa aagtaacagt agaaaatggt
    10081 gcagatgaag tagctgaaat tgaattagaa ttcactgcta tgattgatga taatagaaaa
    10141 tgttattatg aagcaattgt atcagagctt gatgctactg gtcgcgatgc atttgtaaag
    10201 caatggcaca caaatttcac accagaaatg gttgttgcca caccctgaaa ctccccttga
    10261 attgcctttg gaaaatgaat ctggcatagg ggacgactca gaagaaacaa ctcaagatta
    10321 gacggggtaa attatcccgt cttttttatt tgcataggag gaattttaat ggaatttaca
    10381 atagattttt tagatggaac taaagcgcaa ttagactcaa atgtcacaat gttaacttta
    10441 tatcgattgc aaaacgaagg tgaaggtgct gtcgatggga aatttttaaa aggttttatg
    10501 caaaaagaag cagatttaga ccctatttca attgcacaag caatgtatgc ggcgtataga
    10561 caagctacag acaaaaaaaa agcaaagaat tttgaagagt ttatggaaaa ttatcaaatg
    10621 gatttggaaa ttgatatgca aatttatttc gcaattgtta cgaagcgagc tagagatgag
    10681 tttgcaaaac aattcaaaaa gaaaacaggt agttcaaaag gaaaaaaata aaactgccgg
    10741 acatcattat tgaatgtgta gaggatttgt acactttata tctctatgtg tttgaactaa
    10801 atcgtgatga tatctggcaa ctgcccttaa catccgttca gatgatagca gagaaaaaga
    10861 ctgcaattga aaactggaca aattatgaga acgaaaaggc aggtgggaaa taaatggcaa
    10921 acaatcaagc gaaagttaca tttaaagttt ttaatcagga cttcaataga gccatggcag
    10981 aaatgaacgc tgatagtaaa aaattgagac aagaattaaa acttgaacaa gaacagttaa
    11041 aaaacactgg atcagaaact gataaattag cagctgattt aaatggtcta caaaagcaat
    11101 atgatgtagc tagtcaaaaa acaaaagaaa cagcgcaaca gctagaaaag gtaaaaacaa
    11161 aatttggaga aaacagcaca gaagcaagtc ggatggagtc agctcttaag agcgcgcaaa
    11221 taacagaaca acaacttgct aacaaaattg agcttactac tgatgcttta gagaaggcaa
    11281 aatcagcaga aactggtaga gttgcttctt tgaataaatt gcaatcagaa caatctaatt
    11341 tagaagctca atcggaaaaa ttggcaagcg agtataaatt agagtcggct gcgatggaag
    11401 gtactgctac agaagctgaa aagcttgcta gagctgaaaa gtatcttgct gatcaaacaa
    11461 atgtagctga acaaaaaatt aagaatatgg aacaacagct agaattagtt aaacaagaat
    11521 atggtgaaaa tagtacagaa gctttgaaga tggaaacatc attaaatgaa gcaaagatgt
    11581 ctgtgtcgaa actaggcaat gagttgactg aattcaagaa tgactctaac aatgccgggc
    11641 aagggatgga tgaattaaat aataaaatgt ctggtgcggt tatgatggaa gcggcagagc
    11701 atatcgcagc tgtaggagaa aaactcaagg aaattggtca atatgcactt gaagcttttc
    11761 gtgaagtaga tgaaggtctg gacacaatca ttacaaaaac aggtgcgacc ggaaaagccg
    11821 gagaagattt atcaaatgta tttgataaca ttgcaggcaa ttctaagttt gagtttcaac
    11881 aaattggtga tgctgtgggt gagctcaaca ctcaatttgg atttacaggt aaggaattag
    11941 aaaaaaattc tatgaaactg ttgaagttct ctgatataaa tggttctgat gttactaaca
    12001 gtactatgaa ggcgaaacag gcacttgaag cttatggatt ggaaaataaa gatttatcca
    12061 tggttcttga ttcggtgact tatgttgcgc aagggacagg tcaaagtgtc gatgacatat
    12121 ttgataaggc tgtcaagggt gcaccacaga ttgaagcatt gggtctatca tttgcggatg
    12181 gtgcacaatt aatgggtaat ttggacaaag ctggtgtcga ttcaagtgcc acattatcta
    12241 gtttgacaaa ggctagtgtt gtgtacgcaa aagaaaataa aactcttgcg caaggtttat
    12301 ctgaattaga aggtaaaatt tcgggagcta aaacagagac tgaaaaaatt aatctagctg
    12361 cggaagtttt tggttcaaag ggtgcgccac gaatggtaaa agctatagag gacggtcgtt
    12421 taagtttaga cggtcttgca ggaacggcgg aaatggcttc aggaacagtg tctaaaatat
    12481 ttgaagcaac tcttgaccct atagaccgac aagatgtcgc tttgaataat gtgaaaatgg
    12541 caatggctga tttggggaac tctattgcag aggtacttgc gccaattcta gacgcgcttt
    12601 catctgtctt acaaaaggtg tcagagtggt tcaatggact acctgcccct gtccgacaag
    12661 tgacagttgt aattggactg ttgctaatag gttttaccgc attgctccca gtcataactg
    12721 cgatagttgc tatgattggc attttaggaa cagcgatgtt aggcgtggta ggcattatag
    12781 cagcgatagt tgctggaatt gctatattag tcgttggatt caaatggttg tgggataatt
    12841 gcgaaggttt tcggaatttc tggataggat tgtgggaatg gattgttgcg gctttcaaag
    12901 cagcttggga atatattcaa ccaggtttac aatctattgg agatgcactt aaaaagttct
    12961 gggaagaata tggtccgaca attattggag cgttgcaagc tgtttgggac tttattgtag
    13021 gctttgttgc ttggttagaa ccattgtgga catttttatg ggaaggttta aaaagtacac
    13081 ttaaatttgc atgggatgca attttagcta ttgttcaatt tgctttagat tatcttggtg
    13141 gtttgattga cttttgggca gggattttca caggtgactg ggatagagtt tggaaaggta
    13201 ttcaagaaat gactagtgct gctttggaag ctatcaaagg tatattcttt gcactggtta
    13261 ggtggataga taatattcta aagtctttag gaatagacat gggtgctatt tggaaaagca
    13321 tcactgatgc tacaaaaaca gcatggaagt ggattagtga ttacattgtt aatcctatta
    13381 gagatgcaaa caatagagcc aaacttattt tagctgcctt taaagccgcc tttaagatta
    13441 cttttgatgt aatacgagat aatatagcaa acacgtggtc aaaagtagag gataaaatta
    13501 taaaaccagt gaaaaatgca tatgataaag ttaaaaacat tgttgacgat attaaagata
    13561 catttaaaaa tctaaaaata aaatttccta aaattgaaat gcctccaatg ccacatttta
    13621 gtttgaaagg taaatttagt ttaaaagaga tgacagttcc taaattggat gtaagctggc
    13681 ataaaaatgg aggtttcttt aactcagcat ctgtcattgg gattggagaa gctggtccgg
    13741 aagccgctgt gcctcttgtt gggaaaagga tggacccttt tgctgacgct gtatcaaata
    13801 gaatgctttc atcgctacct agtatggcac aagggaaaat atctgaaaac aataatgatg
    13861 tcaaagttga aattaatatg aataataatt tatatggtgc tgctgatgaa gatagattag
    13921 tcaataaagt gaaacgcgaa ataactaata gtatgaattc taaaacaaca gcatggggag
    13981 gtagaacttc gtgaattatc aaatctttat agatgatgtc tcatgtaatg attatgattt
    14041 atgtgttgca gaaagacctt tgctaaaaac acctgaacaa gacgttgaaa ttagagaaat
    14101 tagaggaaga aatggtgctt ttattatccc gtttgcatat aaaaatgtag aagaagagat
    14161 ttcatttaat tttttagatg attctaagtc atttaaacaa ctttttagag aagcaaaacg
    14221 gtattttatg aatgggaaaa accttgtatt ctctgatgat ccacatgtat atagaaaaat
    14281 tgttcacgta tctttttcgg atgcagaaaa taccgtttta gaatacggct tttttaatgt
    14341 tattttcact ttagaccctt ttcaatatgc
//
LOCUS       DASDYO010000082        14260 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.082, whole genome shotgun sequence.
ACCESSION   DASDYO010000082 DASDYO010000000
VERSION     DASDYO010000082.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14260
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.082"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            109..828
                     /gene="budA"
                     /locus_tag="U0290_001983"
     CDS             109..828
                     /gene="budA"
                     /locus_tag="U0290_001983"
                     /EC_number="4.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465516.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate decarboxylase"
                     /protein_id="HEM2302022.1"
                     /translation="MDTVRKNRLFQHSTMAALVGGLFSGTTSFKELLQHGDLGIGTLD
                     QFDGELIILDGEAFQIRSDGQAYKVKPEDTTPYASTTFFDADTSFSVSEPTSKQAVEE
                     KIAELVQGPNVFYAVKMTGNFRYVDTRVVPKQQRPYPPLIEAVKEQPTYHFEYITGTI
                     VGFWTPAYISGIGVSGYHVHFIDDMRKIGGHVFDYEMLEGTVEVAQQTEFELQLPQTT
                     EFLRSDLSTPDMLEQIEAAEN"
     gene            complement(865..2166)
                     /locus_tag="U0290_001984"
     CDS             complement(865..2166)
                     /locus_tag="U0290_001984"
                     /EC_number="2.4.2.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465517.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyrimidine-nucleoside phosphorylase"
                     /protein_id="HEM2302023.1"
                     /translation="MRMVDIISKKRDGKALSTEEIQFFIDGYTNGEIPDYQASALAMA
                     IFFQDMNDQERADLTMAMVGSGDTIDLSAIEGIKVDKHSTGGVGDTTTLVLAPLVAAV
                     GVPVAKMSGRGLGHTGGTIDKLESIEGFHIELDKKDFIDLVNRDKVAVIGQSGNLTPA
                     DKKMYALRDVTGTVNSIPLIASSIMSKKIAAGADAIVLDVKTGAGAFMKTDEDAENLA
                     HAMVRIGNNVGRNTMAVISDMSQPLGEAIGNALEVKEAIDTLKGQGPEDLTELVLVLG
                     SQMVVLAKQAETLDEARAKLIEVIENGAALEKFKTFLSNQGGDASIVDHPEKLPQAKY
                     QIEVPAKSSGFVSQIVADEIGIAAMILGAGRATKEDEINLAVGLMLRKKVGDAVKEGE
                     SLVTIFADQEDVENVKAKIYENIQISDHATAPTLVHKVITE"
     gene            complement(2297..3307)
                     /locus_tag="U0290_001985"
     CDS             complement(2297..3307)
                     /locus_tag="U0290_001985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465518.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="substrate-binding domain-containing protein"
                     /protein_id="HEM2302024.1"
                     /translation="MAATIREIAEKTGVSITTISQILNGKGERFSDLTREKVLKTAKE
                     MSYKPNFFAKNMIVSHTNTIGMIVPEVTDPFFSQMVKGAEDYLNKEGYMIMLCNSSND
                     KEREDLYVEELLHRAVDGLIIASPNILLSGVIKRMEEKRSPYILLDRQRNPRQEGNIA
                     IDDFKGGYMATEHLIKLGHTRIGIIISDTSFYNVHERYEGYLACMKDYKLTVKDTWIV
                     SGDQTMNGGYVATQKLLQENLSAIFATNDLMAMGTYRAALEKNLHIPTDLSVIGFDDI
                     ELSEYMTPPLTTIRQPIYGIGEIAAELLLKNLQNPTEKLENRLLDISLINRSSTKSID
                     NQ"
     gene            complement(3387..4058)
                     /gene="deoC"
                     /locus_tag="U0290_001986"
     CDS             complement(3387..4058)
                     /gene="deoC"
                     /locus_tag="U0290_001986"
                     /EC_number="4.1.2.4"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465519.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribose-phosphate aldolase"
                     /protein_id="HEM2302025.1"
                     /translation="MTIAKMIDHTALKPDTTKEQILTLTKEAREYGFASVCVNPTWVK
                     LSAEQLAGAESVVCTVIGFPLGANTPEVKAFEVKDAIQNGAKEVDMVINIGALKDKDD
                     ELVERDIRAVVDAAKGKALVKVIIETCLLTDEEKVRACEIAVKAGTDFVKTSTGFSTG
                     GATAEDIALMRKTVGPNIGVKASGGVRTKEDVEKMIEAGATRIGASAGVAIVSGEKPA
                     KPDNY"
     gene            complement(4121..5068)
                     /locus_tag="U0290_001987"
     CDS             complement(4121..5068)
                     /locus_tag="U0290_001987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HEM2302026.1"
                     /translation="MDKQKEQLSVEVARLYYQADLGQQEIATRLGVSRPTVSRLLQNA
                     KTKGYVKIEVQDPFSNLTELAVALKEKYQLKNVTVAFSQTNDYSEITKQISQSAAEYL
                     EEIIHDGDILGVSWGTTMYKIAQKLAPLKAEIKVVQLKGGVSHSDVNTYAAETLALFG
                     AAYDTAPVSLPLPVVLDNPLAKQMVEADRHIKNIIELGKKANISIFTVGTVRDEALLF
                     RLGYFSDQEKARLKEKAVGDICSRFFTIGGEIADEKMDERTIGIDLQDLKQKETAILV
                     AGGERKIKAIHGALRGGYANHFITDQFTAKQLLEQNFIN"
     gene            complement(5166..5582)
                     /locus_tag="U0290_001988"
     CDS             complement(5166..5582)
                     /locus_tag="U0290_001988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2302027.1"
                     /translation="MKAIFVCTHGNAAKELIQSAEMICGKQENTSFVPFEVNESAENL
                     QAKIASEVAKLDLTEGILFLTDLKGGTPFNVLVRLLRNFDAVELVAGVNIPLLLEAFI
                     SRETLSLKELANQVAETGRLGIYEYAAPLEEIEEDF"
     gene            complement(5599..6594)
                     /locus_tag="U0290_001989"
     CDS             complement(5599..6594)
                     /locus_tag="U0290_001989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465522.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEM2302028.1"
                     /translation="MLKFDEQKVRENMEGALKLRPQINEVVDQIHDRGFSNICWLGIG
                     GTYASAMQAVVHMKEKTALETFYENAAVFLTTGNKRVTKDTLVVISSVTGSTQEVVDA
                     VKKCNEIGATVFGFIDKAEAELATLVDHLISYPLNEQLKFFMVADRFMYLAGEFEDYD
                     AFYQEMDQHFAEGIVEVEKAADKFGQEFALKHHQDDIHYFVGAGNQWGATYSYAMCYW
                     EEQHWIKTKSIESHEFFHGMFEIVERDTPVTIYVTEDSQRSLSERVVNFIPQICANYT
                     VIDAKDYDMPGISAKFRGALSPFIIHAVNNRIDVHVEKINCHPMEIRRYYRQLDY"
     gene            complement(6617..7681)
                     /locus_tag="U0290_001990"
     CDS             complement(6617..7681)
                     /locus_tag="U0290_001990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465523.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEM2302029.1"
                     /translation="MKNMDYYIRSEQSVYENIIRSRKDLLQKVIQMEKVDYQAIVIFA
                     TGSSSNAAFAAQLYMSDKLAIPVYVEEPSTAGNYMLHLNKNTLYIAISQGGHSYSTIH
                     LVKEIERQGGIVFTLTSDLTSPIAKESTRAIDLGMGIEEMPYVTLGYSATILMLNLMA
                     LELALLQEKMLEEEYQAEIAELKKITANLPKVVEKSAAWVDAHTQELMEAERVFFIGY
                     GAAYGVAREGETKVTETIRITAFGKELEEYMHGPYIGLSEQDYIIFLEPQGLLEDRAE
                     KLKQFLQGHVKKIRTFYADAGGEKTDDLLLGVRAAELLTPLFMTIPVHLLSFEISKKK
                     GINLEVSAFPEFDQITKSKI"
     gene            complement(7694..8515)
                     /locus_tag="U0290_001991"
     CDS             complement(7694..8515)
                     /locus_tag="U0290_001991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465524.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system mannose/fructose/sorbose family
                     transporter subunit IID"
                     /protein_id="HEM2302030.1"
                     /translation="MKMKSSDVLTKKDLMKVFWRSFTMEWSWNYERQSNLGYGFSMLP
                     ALNKIFKNDKDKRISSYQRHLEFYNVTPWLSTFPLGISIAMEEQSAKDKDFDTDSINN
                     IKVALMGPLSGIGDSFFWGTLRVIATGIGTSLALQGNMLGPILFLLIFNIPAILTRYY
                     GLFIGYNIGANFIEKIQKTGLMDKLSYGASVIGLAVVGAMVATMVNINMPMKFGSGDD
                     AVTIQSVFDGIVPGILALGFTFFIFWLDKKGLKAHWILLLIAGIGILGAFTGLLK"
     gene            complement(8496..9314)
                     /locus_tag="U0290_001992"
     CDS             complement(8496..9314)
                     /locus_tag="U0290_001992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465525.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2302031.1"
                     /translation="MEQFGTAILLALAAMLANGEYLFGSSMLSRPLVTCTLAGLIMGD
                     VQMGIIMGATLELAFVGSFSIGASIPPEIISGSILGTAFAISTGESTAVALALGIPIA
                     SLVLVVKNLCFIFVLPYFVHKADKYALEGNSRGISRMQLLGGFLSINLPIGIIVATSY
                     LVGSPVIQNVLDAIPAFVITGLGIATGLLPAYGFALLLKLMVNKKNAVFFVFGFALAV
                     YLKVPVTGVAIFAACLALILTGYATLKNDNGPKNSNTEPALANDGGINYEDEEF"
     gene            complement(9337..9804)
                     /locus_tag="U0290_001993"
     CDS             complement(9337..9804)
                     /locus_tag="U0290_001993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465526.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2302032.1"
                     /translation="MIQFLRVDHRLLHGQVAVSWFNALDVNTILVANDGVAADDFRKS
                     AIRLAKPEAAKLVMKSIDESIEAINSGVTDKYNMLIVVESVEDAYKLIHGTNGKIPML
                     NLGGTKQREGTANFSKAINLTPEEVAKLKELQKENVDVFMQQVPNEKKVTFEA"
     gene            complement(9824..10525)
                     /locus_tag="U0290_001994"
     CDS             complement(9824..10525)
                     /locus_tag="U0290_001994"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302033.1"
                     /translation="MGAKKPLFEVIASEIKDSINRDEYKPGMLMPNETALQEIFSSSR
                     TTIRRAVDLLVEEGLVVRKNGVGLYVQPKLTAQNILEMTGVMKTDTNENLKKDIKDFY
                     IRKAGKFYAEKFGIKENELVYSIKFVQKSEHGVTLDRLILPLSLYPDLQAKDFQIINI
                     IELVNSGKYKLFELEQELQLILAGNEQIKNMHIDENDPVFKLSSVFYAENEMPIAIQY
                     HYEDAESTKYVVDFN"
     gene            complement(10527..11258)
                     /locus_tag="U0290_001995"
     CDS             complement(10527..11258)
                     /locus_tag="U0290_001995"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302034.1"
                     /translation="MEYKDLSPAVQSEEQLRQLIQEKVAAGETSFPSERALENELGVS
                     RTTLRRSLDTLEKEAVIQKRNRKGIEINQKQTINILQMNSMSSQLPGEQKVEVMSQEI
                     VAGKDEVNHFLNLSEDKPVFKLVRRRIVDNKPFSYEISFIDSTRFAGIEKIDLNNSSL
                     YNVLEKQFAIKPTYGREELRFVSANEKLAEALKVPLNTPLFEVVSKAFDQNDEPFEYS
                     KQYLIGNQIKYKINAKNIFDYLEDE"
     gene            complement(11431..12426)
                     /locus_tag="U0290_001996"
     CDS             complement(11431..12426)
                     /locus_tag="U0290_001996"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2302035.1"
                     /translation="MEYVKFGNTGMDVSKICLGTMGFGDKDKWIHKWVLNEANSRPII
                     KKALDLGINFFDTANIYSYGESEKIVGRALKDYANRDDVVLATKVQQTMRPDRPNSGG
                     LSRKTILSEIDHSLKRLETDYVDLYIIHRFDENTPIEETMEALHDVVKSGKARYIGAS
                     AMYAWQFQKAQRVAERNGWTKFVSMQNHYNMIYREEEREMIPFCRDEKIAITPYSPLA
                     SGRLTRDLNETTNRSETDPVQKSKYDDMMNADRGIIERVAELAETHQVSRDKIALAWL
                     LNKDEITSPIIGAQKESHLESAVEALNIQLTAAEVNYLEELYIPHPVVGALPTTK"
     gene            complement(12543..14240)
                     /gene="alsS"
                     /locus_tag="U0290_001997"
     CDS             complement(12543..14240)
                     /gene="alsS"
                     /locus_tag="U0290_001997"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase AlsS"
                     /protein_id="HEM2302036.1"
                     /translation="MAKLEKDQEKVITQGKSGADLVVDSLINQGVTHVFGIPGAKIDK
                     VFDVMEERGPELIVSRHEQNAAFMAAAIGRLTGKPGVVLVTSGPGASNLATGLVTATA
                     EGDPVVAIAGNVTRQDRLKKTHQSMDNAALFRPITKYSEEVVHAESIPEAITNAFRSA
                     AEPNQGAAFVSLPQDIVNEPNVPVKAIRPLAKPENGPASKEQVAKLVARLKKAKLPVL
                     LLGMRASSPEVTGAIRRLLQKTSIPVVETFQAAGVISRDLEDNFFGRVGLFRNQPGDI
                     LLNKADLVITVGYDPIEYDPKAWNASGDRTIVHLDDIRADIDHYYQPVTELVGNIALT
                     LDRVNAKFSGLELAEKELETLKELHAQLEERDVPPESDETNRVHPLSVIQTLRSAIDD
                     NVTVTVDVGSHYIWMARHFRSYEPRRLLFSNGMQTLGVALPWGIAATLVHPGEKVVSI
                     SGDGGFLFSAMELETAVRLRAPLVHLVWNDGSYDMVAFQQKMKYGKEAAVRFGDVDIV
                     KFAESFGAKGLRVTKPSELSDVLKEALETEGPVVVDIPIDYRDNIKLGETLLPDQFY"
BASE COUNT         3851 a         3024 c         2618 g         4767 t
ORIGIN      
        1 ttaaaatctt ttgtttaagg atataaagta gtataatgaa catatagaaa ttaaactgta
       61 ttattaaaaa ataacttttc atatataaca atgcaaggag tggcaataat ggacacagtt
      121 agaaaaaatc gattatttca gcattctaca atggcagcac ttgttggtgg gctttttagc
      181 ggaacaacga gtttcaaaga attattacaa cacggtgacc tcggtatagg aacacttgac
      241 caatttgatg gtgaattaat tattttagac ggagaagctt ttcaaatacg atcagacggg
      301 caagcttata aagtaaagcc agaagatacg acaccttatg cgagcaccac tttttttgat
      361 gctgatactt ctttttccgt ttccgaaccg acatcaaaac aagcggtgga agaaaaaatc
      421 gcagaattag tacaaggacc aaatgttttt tatgcagtga aaatgaccgg gaatttccgt
      481 tatgtggata cgcgcgttgt accaaaacaa caaaggcctt atccgccact cattgaagcg
      541 gtaaaagaac aaccaacgta ccattttgaa tatattacgg gtacaattgt tggtttttgg
      601 acgcccgctt atattagcgg tattggcgtt tctggctatc atgtgcattt tattgacgat
      661 atgcgtaaaa tcggcggtca tgtatttgat tatgaaatgc tggaaggtac cgtagaagtt
      721 gcgcaacaaa cagaatttga actacaatta cctcaaacga cggaattctt aagaagtgat
      781 ttaagtacgc cggatatgtt ggaacagatt gaagccgcgg aaaattgata aagaaagctc
      841 ccaaattaaa ttgggagctt tcttttattc tgtaataact ttatgaacaa gggttggtgc
      901 tgttgcgtgg tcggaaattt gaatgttttc gtagattttt gcttttacgt tttcgacatc
      961 ttcttggtca gcgaaaatcg ttacgagtga ttcgccttcc ttaacagcat cgcccacttt
     1021 tttgcgtagc attaaaccta ctgctagatt gatttcgtct tccttcgttg cgcgaccagc
     1081 gcctaggatc attgcagcaa tgccaatttc atcggcaacg atttgactta cgaagccaga
     1141 tgatttagcg ggtacttcga tttggtattt tgcttgcgga agtttttctg ggtgatcaac
     1201 aatgcttgca tcgccacctt gattggaaag gaatgttttg aatttctcaa gtgctgcacc
     1261 gttttcgatt acttcaatta atttagcgcg ggcttcgtcg agtgtttccg cttgtttggc
     1321 tagtacgacc atttgactac caagtacaag aactaattct gttaaatctt ctggtccttg
     1381 gccttttaat gtatcgatgg cttcttttac ttctaaagca tttccgattg cttcgccaag
     1441 tggttgggac atatcagaaa tgactgccat cgtatttcta ccaacgttat taccgatgcg
     1501 aaccattgca tgtgctaggt tttcggcatc ctcgtcggtt ttcataaatg caccagcacc
     1561 tgtttttaca tcaagtacga ttgcatctgc gcccgctgcg atttttttac tcataataga
     1621 gcttgcaatt agtggtattg agtttacggt tcctgttaca tcacgaagcg cgtacatttt
     1681 tttatctgct ggtgtaagat tacctgattg accaataact gctactttgt cgcgatttac
     1741 taggtcaatg aaatctttct tatctagttc gatatggaag ccttcgatag attctagttt
     1801 atcaatggtt cctcctgtat gacctaagcc acggccagac atctttgcaa ccggtacgcc
     1861 aactgctgct acgagcggag caagaacaag tgtcgtcgta tcaccaacac cgccagtact
     1921 atgtttatcg actttgattc cttcaattgc ggataggtca atcgtatcgc cagagccaac
     1981 cattgccatt gttaaatctg cgcgttcttg atcattcata tcttggaaaa agattgccat
     2041 ggctagagca cttgcttgat aatctggaat ttccccattt gtatagccat caatgaaaaa
     2101 ctgaatttct tctgttgaca aagctttgcc gtcccttttc ttggaaataa tatccaccat
     2161 tctcatttct cttcaccctt tctttttgtc cactttagca ttttatgtac ctttattgag
     2221 aacggttaca ctttttaagt aaaccgtttt actaaacaag aacatgtgct taacatgctc
     2281 actataactt actcccttac tggttgtcaa tactttttgt actactacgg ttgattagtg
     2341 aaatatcgag taaacgattc tctaatttct cggttggatt ttggagattt ttcagtaata
     2401 gttcggcagc aatttcgccg ataccataga ttggttgccg aatggttgta agtggcggtg
     2461 tcatatattc ggaaagttca atatcatcaa atccgatgac gctaagatca gtaggaatat
     2521 gcaggttttt ttcaagtgcg gctcggtagg ttcccatcgc cattaaatca ttggttgcaa
     2581 aaatggcact cagattttct tggagtaact tttgcgtcgc aacataaccg ccattcatcg
     2641 tctgatcccc gcttacaatc caagtatctt ttacagtaag tttatagtct ttcatgcatg
     2701 ccaagtaacc ctcgtagcgt tcatgtacgt tataaaaaga tgtatccgaa ataatgattc
     2761 cgatgcgcgt atggcctagt ttgattaaat gctcggtcgc catataaccg cctttgaaat
     2821 catcaatcgc gatattccct tcttgccttg gattccgctg acgatcgagt aaaatatacg
     2881 gagaacgctt ctcttccatg cgtttgataa cacctgaaag cagaatatta gggctggcga
     2941 taattaagcc atcgacagcc cggtgcaata attcttctac atataaatct tcacgttctt
     3001 tatcattaga agagttacag agcataatca tgtaaccttc tttattcaag taatcttcgg
     3061 ccccttttac catttgtgaa aaaaaaggat ccgttacttc cgggacaatc attccgatgg
     3121 tgtttgtgtg actaacaatc atatttttgg cgaaaaagtt tggtttgtaa gacatctctt
     3181 ttgctgtttt cagaactttt tcacgagtta agtcgctaaa tcgttcccct ttaccattca
     3241 aaatttgaga aatcgtcgta attgaaacgc ctgtcttttc tgctatttcg cggatggttg
     3301 cagccattta aactccccca gtcagattat ctattctcct tattttgcca catttaagaa
     3361 taataataaa ggggtttcat ccaaaattag taattatctg gtttggctgg tttttcgccg
     3421 gaaacaattg caacacctgc gcttgcgcca atacgagttg cgcctgcttc gatcattttt
     3481 tctacgtctt ctttcgtacg aaccccacca gatgctttta cgccgatgtt tggtcctaca
     3541 gttttacgca ttaaggcgat atcttcggca gttgcgccac ctgtggagaa tccagtggat
     3601 gttttaacga agtctgttcc cgcttttaca gcgatttcac atgcgcgaac tttttcttcg
     3661 tctgttaata ggcaagtttc gataattact tttactaatg cttttccttt ggcagcatcg
     3721 actacagcgc gaatatcacg ttctactagt tcgtcgtctt tgtcttttag tgcgccgata
     3781 ttaataacca tatccacttc ttttgcaccg ttttggatag catcttttac ttcaaatgct
     3841 tttacttcag gggtattcgc tcctagtggg aaaccgataa cagtacatac tacggattct
     3901 gctccagcaa gttgttcagc ggataatttt acccaagttg gatttacgca tacggaagca
     3961 aaaccgtatt ctctcgcttc ttttgttagt gttaaaattt gttctttcgt tgtgtctggt
     4021 tttaaagcag tgtgatcgat cattttggca attgtcattt taaaaactcc tttaaaattg
     4081 gatttggttt catcatatcg cactacagaa catttgtaaa ctaattgatg aaattttgtt
     4141 caagtagttg ttttgcggta aattggtcgg taataaaatg attggcataa ccgcctcgaa
     4201 gtgcgccatg aatcgctttt atttttcgtt caccacctgc gacaagaatg gctgtttctt
     4261 tttgctttaa atcttgcaag tcgataccaa tggttcgttc gtccattttc tcgtcagcga
     4321 tttcgccgcc aattgtgaaa aatcgcgaac aaatatcgcc gactgctttt tcttttaagc
     4381 gagccttttc ttgatcggaa aaatagccta ggcggaaaag cagggcctca tcacgcacgg
     4441 ttcctactgt aaaaatagag atattggctt ttttaccaag ctcgatgata ttttttatat
     4501 ggcggtccgc ttctaccatt tgtttagcga gtggattatc aaggactaca ggaagtggaa
     4561 gtgatactgg cgcggtgtca taagccgcac cgaataacgc taatgtttcg gccgcatacg
     4621 tattgacatc agaatgactc acaccacctt taagttggac gacttttatt tctgctttta
     4681 gcggggctag tttttgggca attttgtaca tcgttgttcc ccaacttacg ccaagaatat
     4741 cgccatcatg gataatttct tctaagtatt cagcggcact ttggctgatt tgcttggtga
     4801 tttcgctata atcatttgtt tgactgaatg caacggtgac atttttaagt tggtattttt
     4861 cttttaaagc cacggccagt tctgttaggt tagaaaatgg atcttggact tcgattttga
     4921 cgtatccttt tgttttcgcg ttttggagta atctggaaac ggtcggtctg gatacaccta
     4981 ggcgtgtggc gatttcttgc tgacctagat ccgcctgata ataaagtctc gcaacctcta
     5041 cgctgagctg ttctttctgt ttatccattt catccctcca tcgttttctt tttagtataa
     5101 cgtaacagcg gggatagttc gagagagaag ataaaaaaaa gacagccgcg gctgtctttt
     5161 tcctattaaa agtcttcttc tatttcttca agcggcgcgg catattcata aattcctaac
     5221 cgcccagttt cggcaacttg attcgcaagt tcttttaagg atagcgtttc acggctgatg
     5281 aatgcttcta ataaaagcgg aatattcacg cctgcgacaa gttctactgc atcaaaattc
     5341 cgaagtaacc gaacgagtac attaaacgga gtcccacctt ttaaatcagt tagaaataag
     5401 atcccttctg ttagatcgag tttagctact tcactggcaa ttttcgcctg taaattttcc
     5461 gcggattcat tcacttcaaa aggaacaaaa cttgtatttt cttgtttacc gcaaatcatt
     5521 tctgcagatt gaatgagttc ttttgcggca tttccatggg tacaaacaaa aattgctttc
     5581 atttttcaaa ccgccttttt aatagtctaa ctgacgataa tatcttctga tttccattgg
     5641 atgacagtta attttttcca cgtgtacgtc aatgcgatta tttactgcgt ggataataaa
     5701 tggtgataac gctcctctga atttggcgga aatacccggc atatcgtaat cttttgcatc
     5761 aatgactgta taattggcac agatttgcgg aatgaaatta actactcgct cgcttaaaga
     5821 acgctggcta tcttctgtca cataaatggt aaccggggta tcgcgttcta caatttcaaa
     5881 catgccatgg aaaaactcgt gagactcaat tgattttgtt ttaatccagt gttgctcttc
     5941 ccaataacac attgcgtaag aataggtcgc gccccactgg ttcccagcac caacgaaata
     6001 atgaatgtcg tcttgatgat gttttagcgc aaattcttga ccaaatttat ccgccgcttt
     6061 ttctacttcg acaatccctt cagcaaaatg ttgatccatt tcttgataaa acgcatcgta
     6121 atcttcaaat tcgccagcta aatacataaa acgatctgct accatgaaga attttaattg
     6181 ttcatttaac ggataggaga ttaagtgatc tactaaagtc gcaagttctg cttctgcttt
     6241 atcaataaac ccaaataccg ttgcgccaat ttcattacat tttttcacag catctaccac
     6301 ttcttgcgta cttccagtta ccgatgaaat gactacaagg gtatctttag taacacgttt
     6361 attgcctgtc gttagaaaca cagcagcatt ttcataaaaa gtttctaatg ccgttttttc
     6421 tttcatatgc accactgctt gcatggcgga cgcgtatgta ccgccaattc ctagccagca
     6481 aatattacta aagccgcggt catgtatttg gtcaactact tcattaattt gcgggcgtaa
     6541 ttttagcgct ccttccatgt tttctctcac tttttgttca tcaaatttta gcactattca
     6601 ttcctacttt ctttggttaa attttggatt tcgttatttg gtcaaattct ggaaaagcgg
     6661 atacttctaa attaattcct tttttcttgg aaatttcaaa ggataataaa tgaaccggaa
     6721 tagtcataaa cagcggtgtc agaagttctg ctgcccgcac accgagtaat aaatcatctg
     6781 tcttttcccc gcctgcatcc gcataaaatg ttcggatttt ctttacatgg ccttgtaaaa
     6841 attgttttaa tttttctgcg cggtcttcta gtaagccttg aggttcaagg aagataatat
     6901 agtcttgctc ggataaacct atataaggtc cgtgcatata ttcttctaac tccttaccaa
     6961 aagctgtaat ccggatggtt tctgttactt ttgtttctcc ttcgcgcgct acaccataag
     7021 cagcgccgta tcctatgaag aaaactcgtt ccgcttccat caattcctgt gtatgcgcgt
     7081 ctacccaagc tgctgatttc tctaccactt ttggtaaatt agcggtaatt tttttcaatt
     7141 ctgcaatttc cgcttgatat tcttcttcca acattttctc ttgtaaaagg gctagctcaa
     7201 gcgccattaa attcaacatg agaatggttg cgctatagcc aagcgtgaca tatggcatct
     7261 cttctatccc catcccgaga tcaattgccc gcgtactttc tttcgcaatc gggcttgtta
     7321 agtcgctcgt taaagtgaaa acaatgccac cttgacgctc aatttctttt acgagatgaa
     7381 tagtggaata actgtgccca ccttgtgata tagcgatgta taaggtgttt ttgtttaagt
     7441 gaagcatgta atttcctgca gtagatggtt cttccacata tacgggaatg gcgagtttat
     7501 ccgacatata taactgcgct gcaaatgccg cattagaact agaacctgtt gcaaaaataa
     7561 caattgcttg atagtccact ttctccattt gaatgacctt ttgtaaaaga tcttttcgac
     7621 ttcggatgat attttcataa acactttgtt ccgaccggat ataataatcc atgtttttca
     7681 ttttttcacc tacttatttt aataaacctg tgaacgctcc taaaattcca attcctgcga
     7741 ttaataaaag aatccaatgt gcttttagtc cttttttatc taaccagaaa ataaagaagg
     7801 tgaagccaag tgctaggatt cctgggacga taccgtcaaa aacactttga atcgttactg
     7861 catcatcacc agagccaaat ttcattggca tgttaatgtt caccatcgtg gcgaccattg
     7921 caccaactac ggccagcccg ataaccgaag caccataaga cagtttatcc attaatccag
     7981 ttttttgaat tttttcgata aaattagctc cgatattgta gccaataaat aatccataat
     8041 aacgagtcag aatagctgga atattgaaaa taagaaggaa caaaatcggc cctaacatat
     8101 ttccttgaag tgctaaggaa gttccaatac ctgtagcgat aacgcgtaaa gttccccaga
     8161 agaacgaatc tccaatccca ctcagcggtc ccattaacgc tacttttata ttattgatgg
     8221 agtctgtgtc aaaatcttta tctttcgcag attgttcctc catcgcaatc gaaatcccta
     8281 gcggaaaagt ggaaagccac ggtgttacgt tataaaattc taaatgcctt tgataagaag
     8341 aaattcgttt atctttatca tttttaaaaa ttttgtttaa ggctggtagc atggaaaatc
     8401 cataaccgag attggattgt cgttcgtagt tccatgacca ttccatcgtg aacgagcgcc
     8461 agaaaacttt cattaagtct ttttttgtta atacgtcaga actcttcatc ttcataattt
     8521 atacctccat cattcgcaag tgctggctct gtattcgaat tctttggacc attgtcattt
     8581 ttaagcgttg cataacctgt taaaattagc gctaaacatg cagcgaaaat cgctacgcct
     8641 gttacaggaa cttttaaata aacagctaat gcgaagccaa atacgaaaaa tacggcattc
     8701 ttcttattga ccattaattt gagaagtaaa gcaaaaccat atgctggcag taaacctgtc
     8761 gcaattccaa gtcctgttat aacgaaagcc gggatggcat caagtacgtt ttggatgact
     8821 gggcttccga ctagatagga cgttgcgaca ataataccaa ttggtaagtt gatcgataaa
     8881 aatccgccga gcagttgcat tcgactgatt cctcgtgaat taccctcgag tgcgtattta
     8941 tctgctttat gaacaaagta aggtaatacg aaaatgaagc atagattttt aacgacaagt
     9001 acaagggaag caatcggaat tccaagtgct aatgctaccg ctgtgctctc gccagtcgaa
     9061 atcgcaaagg ctgttcctag tatacttcct gaaataattt ctggaggaat agatgctccg
     9121 atagaaaatg atcctacaaa agctaattcc aaagttgctc ccataataat ccccatttgt
     9181 acatcaccca tgataagtcc ggcgagtgta catgttacca gtggtcttga tagcatcgat
     9241 gaaccaaata aatattctcc atttgcaagc attgctgcaa gtgcaagcaa aatcgctgtt
     9301 ccaaactgtt ccataattta tcccttcttt cgtcttttat gcttcaaagg ttactttttt
     9361 ctcgttaggc acttgttgca taaatacatc tacattttct ttttgaagtt cttttaactt
     9421 cgctacttct tcaggtgtta aattgattgc tttggaaaaa ttagctgttc cttctcgttg
     9481 ctttgttccg cctagattta acatcgggat tttaccattc gtaccatgga ttaatttgta
     9541 agcgtcttca actgattcga caacaataag catgttgtat ttgtcagtga cgccggaatt
     9601 aatcgcttcg atactttcat cgatactttt catgactagt tttgccgcct cgggtttagc
     9661 aagacgtatt gccgacttac ggaaatcgtc cgccgctacc ccatcatttg ccactaaaat
     9721 tgtatttaca tctaaagcat taaaccaaga cacagctact tgtccatgta gtaaacgatg
     9781 gtccactctt agaaattgaa tcattttttc ttcctccttc gtattagtta aaatcaacta
     9841 catatttggt cgactcagca tcttcataat gatattggat ggcaattggc atctcgtttt
     9901 ctgcataaaa gacactactc aatttgaaaa caggatcatt ttcgtctata tgcatatttt
     9961 tgatttgctc attcccagct aaaataagtt gaagttcctg ctcaagctca aataatttat
    10021 atttacctga attaacaagc tcaataatat taataatttg aaaatccttt gcttgtaaat
    10081 cagggtataa acttaacggt aaaattaagc gatctagtgt gacaccatgc tcactttttt
    10141 ggacaaactt gatagaatac acaagttcat tctcttttat accaaacttc tctgcgtaaa
    10201 attttccagc tttacggatg taaaagtctt taatatcttt ttttagattt tcattggtat
    10261 cggttttcat aacacctgtc atttctaaaa tgttctgagc tgttagtttt ggttgaacgt
    10321 atagcccaac accgttttta cgaacaacta aaccttcttc gactaataaa tctaccgcgc
    10381 ggcgaatcgt tgtccgactg ctagaaaaaa tttcttgcaa ggctgtttcg ttcggcatta
    10441 gcattcccgg cttatattca tcgcgattaa tactatcttt tatttctgaa gctattactt
    10501 caaaaagtgg ctttttagct cccatttcac tcatcctcca agtaatcaaa tatgtttttc
    10561 gcattgattt tgtatttgat ttgattacca attagatatt gtttactgta ctcaaaaggt
    10621 tcatcatttt gatcaaatgc tttacttact acttcaaaaa gtggcgtgtt tagtggtacc
    10681 tttaatgctt ctgctagctt ttcattcgct gatacaaagc gcaattcttc gcgcccgtag
    10741 gtaggtttaa tagcaaactg cttttctaac acattgtata acgaggaatt atttaaatcg
    10801 attttctcaa taccagcaaa tctcgtgcta tcaataaaag atatttcata ggaaaacggc
    10861 ttattatcaa ctattcttcg ccgaaccaat ttaaacaccg gcttatcttc acttaagttt
    10921 aaaaagtggt tcacctcgtc tttgccggct actatttctt gtgacattac ttctactttt
    10981 tgttctcccg gcaattggct gctcatggaa ttcatttgca aaatattgat tgtttgcttt
    11041 tgattgattt cgattccttt tcggtttctt ttttggatga ccgcttcttt ttcaagggta
    11101 tcaagtgacc gtctgagtgt agttctactg acacctagtt cgttttcaag cgcacgttct
    11161 gatgggaaac ttgtttctcc ggctgctact ttttcttgga taagctgtct tagttgttct
    11221 tcactttgca ctgctggcga caagtcttta tattccatat ttccacctct tttttcaaat
    11281 catctatcta tttcactttt taaaaagata cagcttcaaa catttttaat accacttcat
    11341 tgtaaacggt tgcattttgt ttgtcaatag tctttttaca taaaaaaaag catgagtcag
    11401 atttttccat ccaactcatg ctccatttga ttatttagtt gtaggtagtg ctccaactac
    11461 tgggtgcggg atatataatt cttctagata gttaacttcc gctgccgtta attgaatatt
    11521 tagcgcctct accgcgcttt ccagatgact ttctttttgt gcaccgatga ttggcgaagt
    11581 gatttcatct ttatttaata gccacgctaa agcaatctta tctcgagata cttgatgtgt
    11641 ttccgcaagt tcagccacac gttcaataat acctctatct gcattcatca tgtcatcgta
    11701 tttggatttt tgaactggat ccgtttcgga acgattggtt gtttcattca aatctcgcgt
    11761 taatcgtcct gatgctagcg ggctgtatgg cgtaatcgca attttttcat cgcgacaaaa
    11821 tggaatcatt tctcgctctt cttcccggta aatcatattg taatgatttt gcatggaaac
    11881 gaattttgtc caaccgtttc tttctgcgac gcgttgtgct ttttgaaact gccaagcata
    11941 catagcactc gctccaatgt aacgcgcttt cccggactta acgacatcgt gtaaagcttc
    12001 catcgtttct tcgattggcg tattttcatc aaaacggtga atgatatata aatctacata
    12061 atccgtttct agtcgtttta agctatggtc gatttcgctc aaaatggttt tcctggataa
    12121 gccaccacta ttcgggcgat ccgggcgcat tgtttgttgc accttggttg ctaacacaac
    12181 atcatcgcgg ttagcatagt cttttagtgc acgtccaacg attttttcac tttcaccgta
    12241 agaataaata ttcgccgtat caaagaaatt tatgcctaaa tcgagtgctt tttttatgat
    12301 agggcgactg ttcgcttcgt tcaaaaccca tttatgaatc catttgtctt tatcaccgaa
    12361 ccccattgtc cctaaacaga ttttcgaaac atccatgcca gtgttgccaa atttaacata
    12421 ttccattcaa aaccctccta gttaatttct agtactatta cagcataaac cttgaagtcc
    12481 actccaagtc aacctttaac tataaaaaaa tctctcggga aatccgagag atttttaacg
    12541 ttttaataaa attggtcagg tagtaaagtt tcgccgagtt tgatgttatc acggtaatca
    12601 attggaatat ctacaacgac gggaccttct gtttcaaggg cttcttttaa cacatcacta
    12661 agttctgacg gtttagttac gcgaagtcct tttgcaccga agctttcggc gaatttaaca
    12721 atatcgacat caccaaaacg aactgctgct tctttgccgt atttcatttt ttgttggaag
    12781 gcgaccatgt catagctacc gtcattccat acaaggtgca caagtggcgc acgcaagcgg
    12841 acagctgttt ctaattccat ggcagaaaat aggaagccac cgtcaccaga aatcgaaacc
    12901 actttttcac ccggatgtac gagtgttgca gcaatccccc aaggaagcgc gacaccaagc
    12961 gtttgcatac cgttactgaa aagcagacgg cgtggttcat aggaccggaa atgacgtgcc
    13021 atccaaatat aatgtgaacc aacgtcgact gtcacagtta cgttgtcatc aattgccgaa
    13081 cgcagcgttt gaatgaccga caacggatgt actcggttag tttcatcact ttctggtgga
    13141 acatctcgtt cttctaattg agcatgaagt tcttttaagg tttcaagttc tttttccgct
    13201 aattctaaac cgctgaattt cgcattcact cggtctaaag taagcgcgat gtttccgact
    13261 aattccgtca caggttgata gtagtggtca atatctgctc ggatgtcatc taaatgtaca
    13321 atcgttctat cacccgaagc attccaggct tttggatcat attcaattgg atcgtaacct
    13381 actgtaataa ctaaatcagc tttatttagc aaaatatccc ctggttggtt gcggaagaga
    13441 cctacacgcc caaagaaatt atcttctaaa tcacgtgaga tgacaccagc tgcttggaag
    13501 gtttctacaa ctgggatgct tgttttttgg agtaggcgac gaatcgcacc agttacttcc
    13561 gggctagatg ctcgcatacc taatagcaat actggtaatt tcgctttttt caaacgagca
    13621 acgagtttcg caacttgttc tttggaagct ggaccatttt ctggtttagc aagtgggcga
    13681 atcgctttta ctggtacgtt tggttcattc acgatatctt gtggcaaact gacaaaagca
    13741 gcgccttggt ttggttctgc cgccgaacga aaagcgttag tgattgcttc cgggatactt
    13801 tcagcgtgaa ctacttcttc gctatatttt gtaattggac ggaaaagtgc tgcattatcc
    13861 attgattgat gtgttttttt aaggcggtct tgcctggtta catttccagc tatcgcaacg
    13921 actggatctc cttcagcagt tgctgttaca agtccagtgg caaggttcga tgcgccgggt
    13981 ccactagtta caagtacaac accaggtttt ccggttagac gaccgatagc ggcagccata
    14041 aacgccgcat tttgctcatg acgactgaca attaattctg gtccacgttc ttccatcaca
    14101 tcgaaaactt tatcaatttt tgctcctgga atcccgaata catgcgtaac accttgatta
    14161 attaagctgt ctacaactaa atccgctcct gattttcctt gtgttattac tttttcttgg
    14221 tctttttcta gtttcgccat cgttatcatc cttttgttat
//
LOCUS       DASDYO010000083        14022 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.083, whole genome shotgun sequence.
ACCESSION   DASDYO010000083 DASDYO010000000
VERSION     DASDYO010000083.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 14022)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 14022)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..14022
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.083"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(140..1075)
                     /locus_tag="U0290_001998"
     CDS             complement(140..1075)
                     /locus_tag="U0290_001998"
                     /EC_number="1.1.1.27"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465059.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-lactate dehydrogenase"
                     /protein_id="HEM2302037.1"
                     /translation="MKPRKVMIIGAGNVGTAAAHAFVNQKFVEELILVDLNKERVEGN
                     RKDLADAAAFMPGKMDITVRDASDCADVDIAVITVTAGPLKEGQTRLDELRSTSRIVS
                     SIVPEMMKGGFNGIFLIATNPCDIITYQVWKLSGLPRERVLGTGVWLDTTRLRRLLAE
                     KLDIAAQSIDAFILGEHGDSQFPVWSHSSIYGKPVNEYSVEKLGEALDLKQIGETARD
                     TGFEIYHQKGCTEYGIGGTIVEICRHIFSGSQRALTVSCVLDGEYGESGLAIGVPAVL
                     SQNGVKEIISLKLDEKEKEAFANSVAVIKKSIQSI"
     gene            complement(1145..1870)
                     /locus_tag="U0290_001999"
     CDS             complement(1145..1870)
                     /locus_tag="U0290_001999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465060.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2302038.1"
                     /translation="MSGHSKWNNIQGRKNAQDSKRSKVFQKLAREIFVAAKKGPDPNL
                     NPSLRLVMDKAKAVNMPNDNIKRAIDKAAGNTSGENYDEVTYEGYAPGGIAVLVHALT
                     DNKNRTSTNVRVAFNKNGGSLGETGSVSYMFDRKGYLVILREGLDVDEEEFMLEAIEA
                     GADDVEVSEDVFEIFTDPATFPEVKEALQEAGYTFATAELSMFPTVYNEVAENNQTQF
                     DKMLEALEDDDDVQEVYTNAEIN"
     gene            complement(1981..2829)
                     /gene="pheA"
                     /locus_tag="U0290_002000"
     CDS             complement(1981..2829)
                     /gene="pheA"
                     /locus_tag="U0290_002000"
                     /EC_number="4.2.1.51"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011702338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prephenate dehydratase"
                     /protein_id="HEM2302039.1"
                     /translation="MKIAYLGPAASFTHAAAAKAFPKEEMIAKSTIPDCIMAIEKEDV
                     DVAVVPIENTIEGSVNITLDYLFHFSSVPVVAEIVLPIAQHLMVHPAHVSAWKSVQKV
                     MSHPQALAQCHTFLQAELYGVEREVTPSTAYAAKWVSNNPTELVAAIAPRMAANEYGL
                     EIVKENAQDLELNQTRFFVLSRKPVSILLPKEEEKTSISVILPNNMPGALHKVLSTFA
                     WRDIDLSKIESRPLKTSLGEYFFLIDVLSEGKETLVTNALDEITLLGGTANKLGTYHV
                     HRLQTT"
     gene            complement(2896..4185)
                     /gene="obgE"
                     /locus_tag="U0290_002001"
     CDS             complement(2896..4185)
                     /gene="obgE"
                     /locus_tag="U0290_002001"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465062.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase ObgE"
                     /protein_id="HEM2302040.1"
                     /translation="MFVDQVKIYVKAGNGGDGMVAFRREKFVPNGGPAGGDGGKGADV
                     VFVVDEGLRTLVDFRFKRIFKAEHGEHGMSKSMHGRGAEDLVVKVPQGTIVKDIDTGE
                     IIADLVAHGQRAVIAKAGRGGRGNKRFATPANPAPELSENGEPGQERNVQLELKVLAD
                     VGLVGFPSVGKSTLLSVVSAARPKIAAYHFTTIVPNLGMVDAGDGRSFVMADLPGLIE
                     GASQGVGLGHQFLRHIERTRVIVHVIDMSGSEGRVPYEDYMAINNELEQYNLRLMERP
                     QIIVANKMDMPDAEENLNEFKTKIAEDIPVFPISAVTKTGLRELLLAIADKLETTPEF
                     PLNEILEQEDEDTVLYKYVAEEPDFEISREPDGTFVLSGAKIERLFTMTNFERDASIS
                     RFARQLRAMGVDEALRKRGAKDGDIVRLLDYEFEFMD"
     gene            complement(4344..5837)
                     /gene="glpK"
                     /locus_tag="U0290_002002"
     CDS             complement(4344..5837)
                     /gene="glpK"
                     /locus_tag="U0290_002002"
                     /EC_number="2.7.1.30"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465063.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol kinase GlpK"
                     /protein_id="HEM2302041.1"
                     /translation="MEKKYILALDQGTTSSRAMIIDEEGEVIGVAQEEFDQIFPKPGW
                     VEHNANEIWASILAVIAGVLLKTNISSKEIAGIGITNQRETTVIWDKESGNPIYNAIV
                     WQSRQTEDICKQLRKDGYEDTIRSKTGLLIDPYFAGTKARWILDHVDGAQERAEKGEL
                     LFGTIDTWLVWKLTGGRAHITDYSNASRTLLYNIYDLEWDDELLKMLNIPKAMLPEVR
                     PSSEVYADTVPYHFFGEEVPVAGIAGDQQAALFGQGCFEKGMAKNTYGTGCFLLMNTG
                     EKAVRSENGLLTTLAWGIDGKVEYALEGSIFVAGSAIQWLRDGLRMVRQSSDSENYAS
                     RIESSDGVYVVPAFVGLGAPYWDSDVRGAVFGLTRGTEKEQFIRATLESLAYQTRDVL
                     YAMEQDSGISLKTLRVDGGASANNFLMQFQSDILGVPVERPENKETTVLGAAFLAGLA
                     VGVWKDKNEIKKHWKLDKRFEVEMKDEQREDLYEGWHKAVKAAQAFK"
     gene            complement(5912..6730)
                     /locus_tag="U0290_002003"
     CDS             complement(5912..6730)
                     /locus_tag="U0290_002003"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aquaporin family protein"
                     /protein_id="HEM2302042.1"
                     /translation="MIDTSLATQFLGEVIGTAILIILGAGVVAGVSLKRSKAENGGWV
                     VITLAWGLGVTMGVYVSGYMSMAHLNPAVTIGMALAGAFPWNYVLPYILAQFIGAFIG
                     ATLIWLHYYPHWKQTEDKPTKLGVFATAPAIRHFTSNFFGEALGTFILVFGLLSLGAN
                     SFSDGLNPLVVGALIVAIGMSLGGTTGYAINPARDLGPRIAHFVWPISGKGGSDWGYS
                     WVPVIGPIMGGALGALGYNAIINGELGMWFWVFAVLFVLILILTMQLDKKKDLA"
     gene            complement(7096..7386)
                     /gene="rpmA"
                     /locus_tag="U0290_002004"
     CDS             complement(7096..7386)
                     /gene="rpmA"
                     /locus_tag="U0290_002004"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L27"
                     /protein_id="HEM2302043.1"
                     /translation="MLKFDIQHFAHKKGGGSTSNGRDSESKRLGAKRADGQFVTGGSI
                     LYRQRGTKIYPGTNVGRGGDDTLFAKTDGVVRFERMGRDKKKVSVYPEVQEA"
     gene            complement(7400..7717)
                     /locus_tag="U0290_002005"
     CDS             complement(7400..7717)
                     /locus_tag="U0290_002005"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosomal-processing cysteine protease Prp"
                     /protein_id="HEM2302044.1"
                     /translation="MIQVDVMREDNQIISFTMSGHADFAEHGSDLVCAGASSIAFGMV
                     NAISEVRDFEPVIEESEGYLYYSVPADYVGDDVVQILLTGMENQLRSLAYSYPDHIKI
                     NSK"
     gene            complement(7736..8044)
                     /gene="rplU"
                     /locus_tag="U0290_002006"
     CDS             complement(7736..8044)
                     /gene="rplU"
                     /locus_tag="U0290_002006"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465067.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L21"
                     /protein_id="HEM2302045.1"
                     /translation="MYAIIETGGKQIKVEAGQEIYVEKLAGEVGDVVTFDKVLFVGGD
                     SAKVGVPFVEGATVTAKVEKQGRAKKLTVYKYKPKKNYHKKQGHRQPYTKLTIDAINA
                     "
     misc_feature    complement(8057..8135)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00559"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="ribosomal protein L21 leader region; Derived by
                     automated computational analysis using gene prediction
                     method: cmsearch."
                     /db_xref="RFAM:RF00559"
     gene            complement(8201..9562)
                     /locus_tag="U0290_002007"
     CDS             complement(8201..9562)
                     /locus_tag="U0290_002007"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465068.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease E/G"
                     /protein_id="HEM2302046.1"
                     /translation="MKKLVVSAAPIEKRIAAMEDDLLIDIEIVRPSEKVQVGDIYYGF
                     IQKIDRKVEAAFVDLGNNNKGFIHLKDIPESYDKTQGAKIPVQIVREGSATKLPLLTG
                     ILEFSGDLLIYLYGKEYISISKRIGDKIRLKKITETMVEENEAVIIRSNAEFATKEQL
                     QQALVQARDKHQTLLKEASKRKKPGLLLSVASGILNSTKQFIQRYAPSEVITDDFEFA
                     KMLEMLWPDKQIIIKKSADLFADLGIKAQIDRLARPVVHLSNGSSLFIEKTEAMWVVD
                     VNSGKFKGTTAKEKTVESVNLKAVPEILRQIRLRNMSGMILVDFIGGMSELGYTALYE
                     ALEIKTREEYITTQVAALSQSGLLQLTRRKKQQSFLETTTMPCPVCYATGHVASKETL
                     AFELERELSGIMQNEPSNIQIITTEDVLDTFLDLNTLSNAPIDWEVADERVPFYQIGR
                     VEN"
     gene            complement(9615..10415)
                     /gene="minD"
                     /locus_tag="U0290_002008"
     CDS             complement(9615..10415)
                     /gene="minD"
                     /locus_tag="U0290_002008"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinD"
                     /protein_id="HEM2302047.1"
                     /translation="MGEAIVITSGKGGVGKTTSTANLGTALALQGKKVCLIDMDIGLR
                     NLDVVLGLENRIIYDLVDVVEGRCKIHQAMIKDKRFDDLLFLLPAAQTTDKNAVSGEQ
                     MVDLINQLRPDYDFILIDCPAGIETGYKNAVAGADKAIVVTTPEISAVRDADRIIGLL
                     EKEDIEPPKLIINRIRTQMMMNGDVMDIDEITTHLSIELLGIIIDDDEVIRSSNSGDP
                     VAMLPNNRASQGYRNIARRILGESIPLMSIETKKAGFFARLKQLFSGK"
     gene            complement(10418..11095)
                     /gene="minC"
                     /locus_tag="U0290_002009"
     CDS             complement(10418..11095)
                     /gene="minC"
                     /locus_tag="U0290_002009"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein MinC"
                     /protein_id="HEM2302048.1"
                     /translation="MKKNVQIKGTKDGISIFLSDKASISELQQELTQLLADQKQNPYS
                     GEKLEVQVQIGNRLFSEEEEREISTIIHENSQMKISAFYSNVMSKDEAKKWKENDQIF
                     SMATIIRSGQVVQVPGDFLLIGDVNPGGQIRSNGNVFVLGNIKGIIHAGFEGNGNAIV
                     AGKFLYPSQVRIADKVYGFDSEDYKEVTETDLFSAFVNDAGEIVIDGIHKIRKIRPEI
                     SNFQGGR"
     gene            complement(11273..11791)
                     /gene="mreD"
                     /locus_tag="U0290_002010"
     CDS             complement(11273..11791)
                     /gene="mreD"
                     /locus_tag="U0290_002010"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreD"
                     /protein_id="HEM2302049.1"
                     /translation="MNVKKNIALPAIMVGTFILEGVFSLQFANGLFNDRHLFIPHFLL
                     IMLTIMTCFYKRNTTLAYAFILGLLFDIYYTGVMGIYFAIFPFTVYITDKFMKVLQNN
                     ILLVGLIAIFNIILTESLVYAFYYLIGTTTMSIPVFIDQRLWTTILINLAFFLVVFFP
                     FRLFLDRLVKSE"
     gene            complement(11794..12681)
                     /gene="mreC"
                     /locus_tag="U0290_002011"
     CDS             complement(11794..12681)
                     /gene="mreC"
                     /locus_tag="U0290_002011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreC"
                     /protein_id="HEM2302050.1"
                     /translation="MPQFFLNKRLIILLISIIVLVALVGFSLRDRENASWPEQFVKDV
                     VGFGENIVAKPTSFISGAVDGVVDLKNTYTENQHLKERLEELAQLESEVADLKKENKD
                     LKESLDITDSIRDYDPLNASVISRNPTNWNDQVEIDKGSSDGVKPDMAVTTPSGLIGK
                     VTTTGAKSATVELLTSSDVKNRVSAKVQGKENAFGIINGYDSDTKLLELKQLPYDMKF
                     KKGQKVVTSGLGGKFPAGIFIGTIEKVETDKMGLSQTAFIKPGADMYDLNHVTVLKRS
                     AEAGTTDDDTTSSDTTGGQ"
     gene            complement(12767..13780)
                     /locus_tag="U0290_002012"
     CDS             complement(12767..13780)
                     /locus_tag="U0290_002012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEM2302051.1"
                     /translation="MFGFGNKDIGIDLGTANTLVYMKGKGIVLREPSVVAMKKDTQEI
                     VAVGSDAKNMIGRTPGNIVAIRPMKDGVIADYDTTAAMMKYYIQKAGKSVNASKPRVM
                     ICVPSGITGVEKRAVIDATRQAGAKDAFTIEEPFAAAIGAGLPVGEPTGSMVVDIGGG
                     TTEVAVISLGGIVTSRSVRTAGDDLDEVIINYIRKKYNLLIGDRTAEAIKMEIGSASP
                     NGLDLSPFSIRGRDLVTGLPKTIEITPEEISGALADTVAAIIDAVKGTLENTPPELSA
                     DIMDKGIVLTGGGALLRNLDTVISEETKMPVIIADEPLDCVAIGTGKALENMDMYKRK
                     KMN"
BASE COUNT         4193 a         3122 c         2168 g         4539 t
ORIGIN      
        1 ttatgtaatc gtacaattta ttcgtcctct cttcatttca cgtcatacat tatatgatag
       61 cataaaacgg aacgtctgta ctagtttttg tttataaaag aaacgcttat ttagtttaca
      121 taataatatt attgacacct taaatagatt gaatactttt tttaataacc gccacagaat
      181 tcgcaaatgc ttctttttct ttctcatcta attttaaaga gatgatttct tttacaccat
      241 tttgacttaa aacggctgga actccgatag ctagaccact ttctccgtat tcgccatcga
      301 gcacacaaga caccgttaaa gcacgctggc tcccactaaa tatatggcga caaatctcga
      361 caatcgtacc acctatgccg tattctgtgc agcctttttg gtggtagatt tcaaaaccag
      421 tatcccgagc agtttcacct atttgtttca aatctagtgc ctcgcctagt ttttccacac
      481 tatattcatt cactggttta ccataaatag atgaatggga ccacacgggg aattgagaat
      541 ctccgtgctc accaaggata aaagcatcga tactttgagc agcaatatct agtttttctg
      601 cgagtaaacg gcgtaacctt gttgtatcaa gccatacccc cgttccgagt actcgttctc
      661 ttggtaaacc ggacaatttc cacacttggt atgtgatgat atcacacgga ttcgtcgcga
      721 ttaagaaaat accattaaac ccgcctttca tcatctcggg cacaatgctt gaaacgattc
      781 ttgaagtact tctcagttcg tctaaacgag tttgtccttc ttttaaagga ccagcagtta
      841 cagtgattac agcgatatct acatctgcac aatcgctcgc atcacgaaca gtaatatcca
      901 ttttaccggg cataaatgca gctgcatcag ccaagtcttt ccgattccct tctacacgtt
      961 ctttatttaa atctacaaga attaactctt ccacaaattt ttgattaaca aatgcgtgtg
     1021 ctgcagctgt tcctacattt ccagctccaa ttatcattac tttacgcggt ttcatatttt
     1081 cttcctccta gtgattcata taaaacaccc ctattcaaat tgtccgaaaa aggggtgtgt
     1141 tgacttaatt tatctctgcg ttcgtataaa cttcttgcac gtcatcatca tcttcaagtg
     1201 cttctaacat tttatcaaat tgtgtttgat tattttctgc aacttcatta taaaccgttg
     1261 gaaacatgga taattcagca gtagcaaaag tgtacccggc ttcttgcaaa gcctctttca
     1321 cttccggaaa agtagccgga tcagtaaaaa tttcaaatac atcttcgctt acttccacat
     1381 catctgcccc tgcttcaata gcctccagca tgaattcctc ttcgtccaca tctaaacctt
     1441 cgcgtaaaat aacaagataa cctttacgat caaacatata gctcacacta ccggtttcac
     1501 caagacttcc accgttttta ttaaaagcta cacgaacatt ggtgctcgta cgatttttat
     1561 tatctgtaag cgcatggaca agaaccgcaa ttcctcccgg cgcatatcct tcataggtta
     1621 cttcatcata attttcgcca ctcgtattac cagcagcttt atcaatagct cgcttaatat
     1681 tatcgttcgg catgttgacc gcttttgctt tatccataac taatcggagt gacgggttta
     1741 aattcggatc aggacctttt ttcgctgcaa caaaaatttc tctcgctaat ttttggaata
     1801 ctttggaacg cttggaatct tgtgcatttt ttctaccttg aatattattc cattttgaat
     1861 gtcctgacat atatttcact ccttttagat ttagtaaagc ttttctccta caaattctaa
     1921 cgtaaaaagg gaggaatcgc aataaaaaag ttaccgcaaa aaattgcgat aactctttat
     1981 ttaagtcgtt tgtaagcggt gaacgtgata agttccaagt ttatttgccg ttccacctaa
     2041 aagtgttatt tcatcaagcg cattagttac gagcgtttct ttcccttctg aaagtacatc
     2101 aatcaagaaa aagtactcgc ctaatgaggt tttaagcggt cttgattcga ttttacttaa
     2161 atcaatatcc cgccaagcaa acgtagataa gactttatgt aacgcacctg gcatattgtt
     2221 aggcaaaata acagaaatag acgttttttc ttcttctttt ggtaataaaa ttgaaacagg
     2281 tttacgactt aaaacaaaaa atcttgtttg atttaattcc aagtcttgcg cattttcttt
     2341 gacgatttca agcccgtact cattcgccgc catgcgtggt gcaatagctg cgacaagttc
     2401 tgtcggatta ttactaaccc attttgcagc ataggctgta gaaggtgtaa cttcacgctc
     2461 tactccatat aattctgctt gaagaaatgt atgacactgg gcaagtgctt gtgggtggga
     2521 cattactttt tgcactgatt tccaagcgga tacgtgtgct ggatgaacca ttaaatgttg
     2581 cgcaatcggg agaacaatct ccgctactac agggacactt gaaaaatgaa ataagtagtc
     2641 cagcgtgata ttgacgcttc cttcaatcgt attttcaatt ggaacaacag ccacatccac
     2701 gtcttccttt tcaattgcca taatacaatc tggaatcgta ctcttagcta tcatctcttc
     2761 ttttggaaaa gcctttgctg ctgccgcgtg tgtaaaagat gctgctgggc ctaaataagc
     2821 aattttcatt ttcaactctc cttttatcgt agctaggaaa aaagcgtgcg ccaactaatt
     2881 ggcgcagcac tttatttaat ccataaattc aaattcataa tcaagcaggc gaacgatatc
     2941 gccgtcttta gcaccacgtt ttctaagcgc ctcatcgaca cccattgcac gaagctgacg
     3001 agcaaaacga ctaatagatg catcgcgctc gaagtttgtc atcgtgaata agcgttcaat
     3061 ttttgcacca cttagtacaa aagtaccgtc tggctctcta gagatctcga agtcaggttc
     3121 ttcagcaaca tatttgtaaa gaactgtatc ttcgtcttct tgttccaaaa tttcattaag
     3181 tggaaattct ggagttgttt ctaatttatc cgcaatagca agaagtaatt cgcgaagtcc
     3241 cgtttttgtt accgcagaaa ttgggaatac cggaatatct tcagcaattt ttgttttaaa
     3301 ttcgtttaaa ttttcttctg catctggcat atccatttta ttagctacaa taatttgtgg
     3361 acgttccatt aggcgcaagt tgtactgttc aagttcatta ttgatagcca tatagtcttc
     3421 gtatggaacg cgtccttctg agcccgacat atcaatgaca tgcacgataa cacgtgttct
     3481 ttcgatatga cgtaagaatt gatgccctaa accaacacct tgactagcgc cttcaattag
     3541 acccggtaaa tcggccataa caaagctacg accatctcct gcgtcaacca ttcctaagtt
     3601 tggaacaatc gtcgtaaagt gatacgcagc gatttttggt ctcgcagcag aaacaacaga
     3661 taatagggtt gatttaccga cacttgggaa accaactaaa ccaacatctg ctaacacttt
     3721 aagttctaat tgcacatttc gttcctgtcc aggttctccg ttttcagaaa gttctggagc
     3781 cggatttgct ggtgttgcaa agcgtttgtt accacgtccg ccacgtccag cttttgcaat
     3841 aactgcgcgt tgaccatgtg cgactaaatc agcaataatc tcacccgtat caatatcttt
     3901 tacaatggtt ccttgtggta ctttgacaac taaatcttct gcgccgcgtc catgcatact
     3961 tttactcatg ccatgttcgc cgtgctctgc tttaaagatt cgtttaaagc ggaaatcaac
     4021 caatgtacgc agaccttcat ctactacaaa tacaacgtct gctcctttac caccgtcacc
     4081 gccagcagga ccaccgtttg gtacaaattt ttcgcgacgg aatgctacca taccgtcccc
     4141 accattacca gcttttacat atatcttaac ctgatctaca aacataattt ttatattctc
     4201 ccgttcctta aaagtcttat ctttcattat aacgaataaa ctatacatct gtcactatat
     4261 ttatttctat ttccaaatat ttatttgttt tacataacaa aaaagcgcca aatgctttta
     4321 cacatttggc gcatcttaaa attttattta aaggcttgtg cagctttgac agctttatgc
     4381 caaccttcat ataaatcttc tctttgttca tctttcattt ctacttcaaa acgtttgtct
     4441 agtttccaat gttttttaat ttcgtttttg tctttccaaa cgcctaccgc aagtccagct
     4501 aagaatgccg cacctagaac ggttgtttct ttgttttctg gacgttctac cggaacgcct
     4561 agaatatcgg attggaattg cattaagaag ttattagcag aagccccgcc atccacacgt
     4621 aacgttttta agctaatacc agaatcttgt tccattgcat aaagcacgtc tcttgtttga
     4681 taagcaagag attccaatgt cgcacggata aattgttctt tttcggtacc acgagttaat
     4741 ccaaaaacag caccacgaac atcggaatcc cagtaaggtg cgcctaaacc aacgaatgct
     4801 ggtacaacat atacaccatc actagattca atccggctcg catagttttc agaatcgctt
     4861 gattgacgaa ccattcgtaa cccgtcacgt aaccactgaa tagccgaacc agcaacgaat
     4921 atactacctt caagtgcata ttctactttt ccatcaattc cccaagctag tgttgttaat
     4981 aagccgtttt cagaacggac tgctttttcc ccagtgttca ttagtaagaa acaaccagtt
     5041 ccataagtat ttttcgccat ccctttttca aaacaacctt gtccgaataa agcggcttgt
     5101 tggtcaccag caatacctgc aaccggcact tcttcaccaa agaagtgata aggcactgtg
     5161 tccgcataca cttcagagga aggacgaact tcaggtaaca ttgcttttgg gatattaagc
     5221 atttttagaa gttcatcatc ccactctaaa tcgtaaatat tataaagaag tgtccgagaa
     5281 gcattggaat aatctgtaat atgagcacga ccaccagtta atttccaaac taaccaagta
     5341 tcgattgttc cgaaaagaag ttctcctttt tcagcacgtt cttgcgcacc atctacatgg
     5401 tcgagaatcc agcgagcttt tgtacccgca aaatacggat caatcaaaag accagtttta
     5461 gaacgaatgg tatcttcata gccgtcttta cgtaattgtt tacaaatatc ttctgtttga
     5521 cgagattgcc aaacaatcgc attataaatt ggatttccgc tttctttatc ccaaataaca
     5581 gtagtttcac gttggtttgt aataccaatc ccagcaattt ctttagaaga aatatttgtt
     5641 ttgagtaata cgcctgcaat aacagctaaa atcgaagccc agatttcatt ggcattatgt
     5701 tcaacccaac ctggtttagg aaaaatttga tcaaattctt cttgtgcaac gccaattact
     5761 tctccttctt cgtcaataat catcgctctt gaactcgttg ttccttgatc cagtgctaaa
     5821 atatatttct tttccatgta aaattcctcc tctagtttta agtacaacga aagcccgaag
     5881 accttcgctt ggagctagtt attattctag cttatgctaa atcttttttc ttgtcgagtt
     5941 gcatcgttaa aataagaatt aaaacaaata atactgcgaa cacccagaac cacattccta
     6001 gttctccgtt aataatggca ttatacccta aagcacctaa tgcaccgccc atgattggtc
     6061 caataactgg aacccatgag taaccccaat cagatccacc tttgccagaa atcggccaaa
     6121 caaaatgcgc aattctcggt ccaaggtcac gagctgggtt gatggcataa ccagtagttc
     6181 caccaagaga catcccgata gctacgatta atgcgccgac aacaagtgga tttaatccat
     6241 ctgaaaaaga atttgcacct agtgatagta atccaaatac taaaataaaa gtacctaatg
     6301 cttcaccaaa aaagttagat gtaaaatggc gaatagctgg cgccgttgca aaaacaccta
     6361 gttttgttgg tttgtcttct gtttgtttcc agtgaggata gtaatgtaac catattagcg
     6421 ttgccccaat aaatgctccg ataaactgag caagaatata tggcaatacg taattccacg
     6481 ggaaagcacc tgcaagcgcc ataccaatag ttacagcagg gttaagatgg gccatactca
     6541 tatatcccga aacatataca cccattgtaa cacctagccc ccaagctaaa gtaataacga
     6601 cccagccgcc attctccgct ttagatcttt tcagtgaaac acctgctacg acaccagcac
     6661 ctaaaataat taggatagcc gtaccaataa cttcacctag aaattgtgtt gctaaacttg
     6721 tgtcaatcat cttttccaac tccttcttct tgcttatttg tatcaccgga attttaacac
     6781 ttactagtcc ccttacattc cgattatcaa ttaacttcaa aaaaagaatg acaatcaaaa
     6841 cgtaggcaca ctagtaccct tgcatcgttt cgattgtcat ctcttctcct gacattttaa
     6901 ttaacttgag tctatttaat catatcaaga aaacgctgtc aatcaaacga cttgtcctat
     6961 ttttcacaat gtctcttcat ctgcctcttt acatttaccc caattcacga gagttataac
     7021 cctttttaaa agaaattaat tcacaaagat gaaaacacaa aaaaaccgcc acaagtgacg
     7081 gttttaaatt tgtatttaag cttcttgtac ttcaggataa acgctaactt ttttcttgtc
     7141 gcgtcccata cgttcgaaac gtacaacgcc gtcagtttta gcgaataaag tatcatcgcc
     7201 gccacgtcct acgttagttc ctggatagat tttagtacca cgttgacggt aaaggataga
     7261 tccaccagta acaaattgtc cgtccgcacg ttttgcacct aaacgttttg attcagagtc
     7321 acgtccgtta gaagtcgaac cgccaccctt tttgtgcgca aaatgttgaa tatcaaattt
     7381 taacatgaaa ttccacctcc tatttggagt taatttttat atgatcagga tagctgtacg
     7441 ctaatgacct tagttgattt tccatccctg taagcaagat ttgcaccacg tcatctccga
     7501 cataatcagc aggcacagaa tagtaaaggt aaccctccga ctcttctatt acaggctcaa
     7561 aatcacgtac ttccgaaata gcattcacca ttccaaaagc aatagaggat gctcctgcac
     7621 ataccaaatc actgccatgt tcggcaaaat cggcgtgtcc actcattgta aaagaaatta
     7681 tttggttgtc ttctcgcata acatcgactt gaatcattgt tttcgtcctt tcaaattaag
     7741 cattgatagc atcaatagtt aattttgtgt aaggttgacg atgaccttgt tttttgtggt
     7801 agttcttttt cggtttatat ttataaactg tcaatttctt cgcacggcct tgtttttcaa
     7861 ctttagctgt tacagttgcg ccttccacga atggaacgcc aactttagcg gaatctccac
     7921 ctacgaatag aactttgtca aaagtaacaa catcaccaac ttcacctgct aatttctcaa
     7981 catagatctc ttggcctgct tctactttga tttgtttccc acctgtttca ataattgcgt
     8041 acatacttgc acctcctcat atactaagac tcgccatcac aggggattta cacgaagtaa
     8101 acacttgacc cagctctgtg cggttgtagc ttggtgcgct acaaacataa cagtaaaatg
     8161 atagcataag caagcagcct atgtcaacca attgttgatt ttagttttcc acccggccaa
     8221 tttgataaaa cgggactctt tcatccgcca cttcccaatc aattggcgca ttacttagcg
     8281 tattcaaatc taaaaaagta tctaaaacat cttctgtcgt aataatttgg atattgcttg
     8341 gctcattttg cataatccct gaaagctctc gttctaattc gaaagcaagc gtctctttgg
     8401 aagccacatg gcccgtcgca taacaaactg gacaaggcat cgttgtcgtt tctaaaaagg
     8461 attgctgttt tttgcgtctc gtcagttgta atagccctga ctgcgataaa gcagcaactt
     8521 gtgttgtaat atattcttcg cgagttttga tctctaacgc ttcataaagc gctgtgtagc
     8581 ccaattctga cattcctcca ataaaatcca ctaatatcat cccactcata ttacgtaacc
     8641 taatttgtcg aaggatttca ggaactgctt tgagatttac tgattctact gttttttctt
     8701 ttgctgtggt acctttaaat ttacctgagt ttacatcaac aacccacatc gcttctgttt
     8761 tttcaataaa taaagaagaa ccattactta aatgaaccac tggtcgtgcg agcctatcta
     8821 tttgagcttt gatacctagg tccgcaaata aatcagcgct tttctttatg atgatttgct
     8881 tatccggcca tagcatttct agcattttag caaactcaaa atcatccgta attacttctg
     8941 atggtgcgta tcgttgaatg aactgtttcg tactatttaa aattcccgaa gccactgata
     9001 atagtaagcc aggttttttc cgcttgctag cttcttttaa taatgtttga tgtttatctc
     9061 tcgcttgaac caaggcttgt tgcaattgct ctttcgtcgc aaattctgca ttagatcgaa
     9121 taattaccgc ttcattttct tccaccatgg tttccgttat tttctttaat ctgattttgt
     9181 ctcctattct tttagaaata gaaatatatt cttttccata caaataaata agcaagtcac
     9241 cagaaaattc cagtatacca gttaataacg gaagtttcgt cgcgctgcct tcccgcacaa
     9301 tttgaactgg aattttagca ccttgcgttt tatcatagct ttccggaata tcttttaaat
     9361 ggatgaaacc tttgttatta ttacctaaat caacaaaagc tgcttccact tttcgatcga
     9421 ttttttgaat aaatccataa taaatatcac caacttgaac tttttcagaa ggtcgtacaa
     9481 tttcaatatc tattaacaaa tcatcttcca ttgctgctat tcgtttttct ataggagccg
     9541 cacttactac tagctttttc atacaatcac cttttataaa gacccttcat cttaaagata
     9601 aagggtctaa ttttttattt cccgctaaaa agttgcttta agcgagcgaa aaatcccgct
     9661 ttttttgttt caatcgacat taaagggata gattctccaa gaatacgtcg agcaatatta
     9721 cgataacctt gtgaagcacg gttatttggt aacatagcga caggatcccc actgttcgaa
     9781 gagcgaataa cttcatcatc atcaatgata ataccaagta attcaattga taaatgtgtg
     9841 gtaatttcat caatatccat tacatcacca ttcatcatca tttgtgtacg aatacggtta
     9901 ataattaatt ttggtggctc aatatcttct ttttccagta aaccgataat tctatctgca
     9961 tcacgaactg ctgatatttc tggcgttgta actacaattg ctttgtctgc accagcaacg
    10021 gcatttttat agccagtttc aattcctgca ggacaatcaa ttaaaataaa atcatagtct
    10081 gggcggagtt gattaattaa atccaccatt tgttcacccg aaacagcatt tttatcagta
    10141 gtttgcgccg ctggaagcaa gaaaagtaaa tcatcaaaac gtttatcttt aatcattgct
    10201 tgatgaattt tacagcgacc ttctaccaca tctactaaat cataaataat tcgattttca
    10261 agacctaaaa caacatctaa attgcgaagg ccgatatcca tatcaatcaa gcacactttc
    10321 ttaccttgaa gagcaagtgc cgttcccaag ttagcagttg aagtagtttt tcctactcca
    10381 cctttcccag aagtaatgac tatagcttct cccatgttta acgccctcct tgaaaattag
    10441 aaatttcagg tctaattttt cttatcttat gtattccatc aattactatc tcacctgcat
    10501 catttacaaa tgcagaaaac aaatctgttt cagtgacctc tttataatcc tcactatcaa
    10561 atccgtatac cttatcggca attctaactt gtgagggata aagaaatttt cctgctacaa
    10621 tagcatttcc gttgccttca aagccagcat gaataattcc tttaatattc cctagaacaa
    10681 atacattgcc atttgaacgg atttgtcccc caggattaac atcgccaatc agcaaaaaat
    10741 cccctggaac ctgaacaact tgtccagaac gaataatcgt tgccatagaa aaaatttgat
    10801 cattttcttt ccattttttg gcctcgtctt tagacatcac attactataa aatgcactaa
    10861 ttttcatttg gctattctca tgaataatag ttgatatttc acgttcttct tcctctgaaa
    10921 acagacggtt accaatttga acttgcacct ctaatttttc accagagtat gggttttgtt
    10981 tctgatctgc aagcaattga gttagttctt gttgcaattc agatatactc gctttatcac
    11041 taagaaaaat actaatgcca tcttttgtgc ctttaatttg aacattcttc ttcatatacc
    11101 atttcacccc gcaacattta tactctagcc tttagtatac actaactcaa attaaatgat
    11161 aataaaaaaa tacttttttt gaaaaaacag cttgaaatcg caaactgtgg atattctcca
    11221 cagtcatact ttttcaagta atagcgactt caaactgtta aaattacgat agttattctg
    11281 atttaaccaa acgatcaaga aacaatcgga atgggaaaaa gacaactaaa aagaatgcta
    11341 aattaatcaa aatggttgtc cataaacgct gatcaataaa aactgggata gacatggttg
    11401 tcgtaccaat caaataataa aacgcatata ctaaactttc tgtaagaata atattaaata
    11461 tcgcaattaa cccaaccaaa agtatattat tttgcaacac tttcataaat ttatctgtga
    11521 tatacactgt aaacgggaag atagcaaaat aaatgcccat cacgccagta taataaatat
    11581 caaacagcaa gcctagaata aaagcatatg ctaaagtcgt atttcgttta taaaaacaag
    11641 tcataatcgt caacataata agtaaaaaat gtggaataaa aagatgtcta tcattaaaca
    11701 gaccattcgc aaactgaaga ctaaaaacac cctcaagaat aaaggttcca accatgattg
    11761 caggaagtgc aatgtttttc ttaacgttca tgattattgt cctccagtcg tgtctgaact
    11821 agttgtatcg tcatccgttg tccctgcttc cgctgaacgc ttcaacacag taacatgatt
    11881 tagatcatac atgtcagcac ctggcttaat aaacgcggtt tgagataatc ccattttatc
    11941 agtttctact ttttcaattg taccgataaa gatacctgct gggaattttc caccgagtcc
    12001 agaagtaaca actttctgtc cttttttaaa tttcatgtca tacggtaatt gttttaattc
    12061 taataactta gtatcactgt cataaccatt gataatcccg aatgcatttt ccttgccctg
    12121 cactttagca gaaacacggt ttttaacatc cgacgaagtt aataattcaa ccgtagctga
    12181 tttagcgcct gtcgttgtta ctttaccaat aagaccactt ggtgttgtaa ctgccatatc
    12241 cggttttact ccatcacttg aacctttgtc gatttctact tgatcattcc aattagtagg
    12301 atttctagaa ataacagaag cattaagtgg atcgtagtca cgaatactat ccgtaatatc
    12361 aagactttct tttaaatctt tattttcttt ttttaagtct gcaacttcac tttcaagttg
    12421 tgccaattct tctaaacgtt cttttagatg ttggttttca gtataagtgt tttttaaatc
    12481 aaccactcca tcaactgcac ctgagataaa tgaagtaggc ttagctacta tattttcgcc
    12541 aaatccaaca acatctttca caaattgttc tggccacgaa gcattctcac gatcacgtaa
    12601 agaaaaacca actagcgcga cgagaacaat aatagatatt aacaagataa tcaaacgttt
    12661 attgagaaaa aattgtggca taacgacacc tcatctcgtt agtactcttt ttccattttt
    12721 ttgaagctaa ttcatcttgt tatatgacat aaatgagcgt gtccatttag ttcatttttt
    12781 tgcgtttata catatccata ttttccaaag ctttccctgt tccaattgca acacaatcaa
    12841 gtggttcatc tgcaataata acaggcattt ttgtttcttc ggaaataact gtatctaaat
    12901 tacgtaaaag agctccccca cctgtgagta caataccttt atccataata tcagctgaca
    12961 attctggtgg tgtattttca agtgttcctt ttacagcatc aataatcgct gctactgtat
    13021 cagcaagtgc tccgctaatt tcttctggag taatttcaat agttttagga agtccagtta
    13081 ctaaatcacg tcctcgaatg ctaaatggag ataagtccaa accatttgga ctagctgagc
    13141 caatttccat tttgattgct tcggcagtac gatcaccaat taatagatta tattttttac
    13201 gaatgtaatt aatgataact tcatctaaat catcaccagc agttcttaca gagcgactgg
    13261 ttacaatacc acctagagaa ataacagcaa cttctgtagt tcctccacca atatctacaa
    13321 ccatgctacc tgtaggctcg ccaactggaa gcccagcacc aatagccgca gcaaatggct
    13381 cttcaattgt aaatgcatct ttagctcctg cttgacgagt cgcatcaata acagcacgtt
    13441 tttctacacc tgtaattcca gaaggtacac atatcattac gcgtggttta cttgcattaa
    13501 cacttttacc agctttttgt atgtaatact tcatcattgc tgcagttgta tcataatcag
    13561 caataacacc atctttcatt ggacgaattg caacgatatt tcctggtgtt ctaccaatca
    13621 tattttttgc atcgctacca actgcaacta tttcttgagt gtcttttttc attgctacaa
    13681 cggaaggttc acgaaggaca ataccttttc ccttcatata gacaagtgtg ttcgctgttc
    13741 ctaaatcaat tccaatatct ttattaccaa atccaaacat ctgtattctc cttttccttc
    13801 gtaatattct acaggataca ttaagtttcc ttattcgtcc attaaattaa tgttacctta
    13861 tccctttgtg tcaatgtttc tgtttagaca cataaacaac catcttatta taacataagt
    13921 aagactatga gacattaatt tttcatgaga aggaaaaaat tttaactttt ctttaaaaac
    13981 attttttgag cgttactaaa tttactaaga atatactttt ga
//
LOCUS       DASDYO010000084        13837 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.084, whole genome shotgun sequence.
ACCESSION   DASDYO010000084 DASDYO010000000
VERSION     DASDYO010000084.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13837
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.084"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            117..1025
                     /locus_tag="U0290_002013"
     CDS             117..1025
                     /locus_tag="U0290_002013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEM2302052.1"
                     /translation="MEIIATADSMKQAEQLLRAGVDRLYVGNSQFGLRLPHSFSVEEL
                     REIVHLAHQEGKKVTVAVNSLMHNEHMEELPGFLEHLADMKVDAVTCGDPGAIMLLSE
                     MAQPIPFIYDAQTFVTSAEQISFWEKQGAIGAVLARELTEGEIKAIASSLTIPVEVLV
                     YGPTCIHQSKRKLVTNYERIVELEDDTSKERGLYLREPNDETSQLPIYEDESGTHIFA
                     SEDVSLVPYLADLYEAGLKTWKLDGVLAESENFVQIASLLVEAKEAVMKGQFVAEYFV
                     NKLTELQPPTRKLDAGFYLKNPDDVK"
     gene            1040..2266
                     /locus_tag="U0290_002014"
     CDS             1040..2266
                     /locus_tag="U0290_002014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464486.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="U32 family peptidase"
                     /protein_id="HEM2302053.1"
                     /translation="MSKILKKPEVLAPAGNLEKLKIAIRYGADAVYIGGQAFGLRSRA
                     GNFSFEEMKEGIAFAHERNAKVYVAANMVAHAGDTEGAGEFFRTLRDIGIDAVIVSDP
                     ALISICFQDAPGLPVHLSTQASATNYKTLEFWKKQGLERVVLAREVSMQEIQEIGEKT
                     DVEMEAFIHGAMCISYSGRCTLSNHMANRDANRGGCAQSCRWKYDLFEIDNGVSKNLV
                     DTDEEPFSMSAVDLSMIKYIPDMVNAGVDSLKIEGRMKSIHYVSTVASVYRRAVDAYC
                     ADPENYVFDPAWEEELWKVAQRELSTGFFYKEPTEDEQLFGKTRKIPQYAFAAQVLEY
                     DEKTKIATLQQRNNFGVGEEIEFYGPGDTGFKQIVEVLWNEDGVEIDRAPNAMMTIKM
                     PVDKPVKPFYFMRKKK"
     gene            2350..2907
                     /locus_tag="U0290_002015"
     CDS             2350..2907
                     /locus_tag="U0290_002015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464487.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LemA family protein"
                     /protein_id="HEM2302054.1"
                     /translation="MIGWIIAIAVVVILVLIYFGLYNSLVKYRNRVDETWAQIDVQLK
                     RRFDLIPNLVETVKGYAKHEKETLTQVIEARNKMMEVPADNRQGQIEADNMLSGALKS
                     IFALGEAYPDLKANTSFIELQHELTTTENKVAYSRQLYNTTVMTYNTKVQSVPTNIVA
                     KLHNFTERDMLSIPEVERVAPKVEF"
     gene            2930..3844
                     /gene="htpX"
                     /locus_tag="U0290_002016"
     CDS             2930..3844
                     /gene="htpX"
                     /locus_tag="U0290_002016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464488.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="zinc metalloprotease HtpX"
                     /protein_id="HEM2302055.1"
                     /translation="MLFEQIAANKRKTIFIILGFFIFVLMVGAAIGIIVWNNYLNGLI
                     LAAVIGAFYILIMVMSSSSVVMAMNHAKEVTSKDQAPVLWDTVESMAMVAGIPMPKVY
                     IVEDASPNAFATGISPEKGAVAVTRGLLNKLERYELEGVIAHEISHIRNYDIRLSTIA
                     IALVAVIAILSDLAMRMIFWGSLTGGRNNRKSDNNNSGGAQAIIYIVALIFVILAPII
                     ATAIQFALSRNREYLADASAVELTRNPDGLIQALQKISGDSKKMEEVSASSESIYFAS
                     PLKSKKNKPGLFDSHPPISSRIERLENM"
     gene            complement(3883..4701)
                     /gene="yjbH"
                     /locus_tag="U0290_002017"
     CDS             complement(3883..4701)
                     /gene="yjbH"
                     /locus_tag="U0290_002017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protease adaptor protein YjbH"
                     /protein_id="HEM2302056.1"
                     /translation="MINQNLYYQSVANSKPIEIYLFFDPACDDCWNIEANMLRLQMEY
                     GNYFKLRYVLHNNLQTFVCKQKRAGNSNLSLKEQQIGAHLSYISCLAVKAAELQGKKQ
                     GITFLRKIQAAYFLENKDIASEEVLYDIAVSTGLDLSEFKKDLASTVAKRAYIGDQKV
                     AQEMEIHENPTVVFFNKNIEDAGLKLSGLHRYEVYVHVLSELLNDAPQPEERPQMEEY
                     LAKVKVTSSATMADFYGVSEQQIERQMKKWRLQQKVELIDAPDGQAHWKYIGNL"
     gene            complement(4939..5523)
                     /locus_tag="U0290_002018"
     CDS             complement(4939..5523)
                     /locus_tag="U0290_002018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CYTH domain-containing protein"
                     /protein_id="HEM2302057.1"
                     /translation="MVKELEIEFRNLLTKEEYDTLIESFRVKEEDFFEQTNYYLDTAN
                     FGLKERHSALRIRQLETQYQLTLKTPEARGLMETTQILGEDQASAIISGANIPVGPVR
                     DTLKELGINHEDLQVFGSLKTIRAEKDYKKGLLVFDKNFYGSISDFDLEYEVSDYDKG
                     KEVFDKLLKEYQITNQPAENKVARFYHHVYENNK"
     gene            complement(5540..6007)
                     /locus_tag="U0290_002019"
     CDS             complement(5540..6007)
                     /locus_tag="U0290_002019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464491.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tetratricopeptide repeat protein"
                     /protein_id="HEM2302058.1"
                     /translation="MILTLLQNGDYETARTQALAELKNNSDNAELHYYAAWAHDALGK
                     EDAAIPFYEKAIQLGLPVDSRKEAYIGLGSTYRITGQPEKASLLFQTALQEFPDNNAL
                     RTFSVMAKYNQGLEKEALQEALILLTQTTSDADILSYKKAIQFYAQDLDATFH"
     gene            6166..6834
                     /locus_tag="U0290_002020"
     CDS             6166..6834
                     /locus_tag="U0290_002020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464492.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTP pyrophosphokinase family protein"
                     /protein_id="HEM2302059.1"
                     /translation="MNHWEDFLAPYKQAVEELKIKLKGMRSQFELENNHSPIEFVTGR
                     VKPVASILDKANQKHIALDHLVEEMQDIAGLRMMCQFVDDIEVVVRLLRQRNDFRIVE
                     ERDYITNKKPSGYRSYHVVIEYPVETIQGEKKILAEIQIRTLAMNFWATIEHSVNYKY
                     QGEFPEAINKRLKRAAEAAFQLDEEMSQIREEIQEAQVYFSQNKDVSKDKKAVHQVMP
                     KKNK"
     gene            6866..7660
                     /locus_tag="U0290_002021"
     CDS             6866..7660
                     /locus_tag="U0290_002021"
                     /EC_number="2.7.1.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464493.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD kinase"
                     /protein_id="HEM2302060.1"
                     /translation="MKYMITSKGDEKSDLLRLNMIAGFGEYDMEYDDVEPEIVISIGG
                     DGTFLSAFHQYEERLDEIAFIGIHTGHLGFYADWRPAEANKLVKLVAKGEYQKVSYPL
                     LKTTVKYGIGKKEATYLALNESTVKSSGGPFVVDVVINDIHFERFRGDGLCMSTPSGT
                     TAYNKSLGGALMHPSIEAMQLTEMASINNRVYRTIGSPLVFPKHHVVSLQPVNDKDFQ
                     ISVDHLSILHRDVQEIRYEVSAKKIHFARFKSFPFWRRVHDSFIED"
     gene            7679..8569
                     /locus_tag="U0290_002022"
     CDS             7679..8569
                     /locus_tag="U0290_002022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM2302061.1"
                     /translation="MFLEWKVETEEDGLLLRTFLKSKHISKQLLTAVKFGAEGKIEVN
                     NKEQNVLYHVKVGDKVRLTFPTEQQNERLLAEYTDLDIIFEDDFLLIINKPAGMASIP
                     SQYHPNGSVANFVKGHYETQGLTNAIHIVTRLDRETSGLMLIAKNRFAHARLSTFLQK
                     GLLKRRYQAFTSGVLVEQKGSIEAPIGRKEVSIMERFVTPEGKYAKTNYEVLARYRAF
                     DHVAIQLETGRTHQIRVHFSYIGHPLIGDDMYGGDTNLLKRQALHSCHLHLVHPLTEK
                     YMAFDLPLPADMEEIIQKSK"
     gene            8647..9435
                     /gene="fabI"
                     /locus_tag="U0290_002023"
     CDS             8647..9435
                     /gene="fabI"
                     /locus_tag="U0290_002023"
                     /EC_number="1.3.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464495.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="enoyl-ACP reductase FabI"
                     /protein_id="HEM2302062.1"
                     /translation="MNLSLEGKTYVVMGVANKRSIAWAIARSLNEAGAKLVFTYADDR
                     AKKSITELVPSLSEVNQNPLILACDVTSEEAITETFETIKDKTGKLSGLAHCIAFANK
                     DFLTGDYLEVDRKSFLQAHEISAYSFTAVARALKHLEMLTEDASLLTLTYLGGERVVE
                     NYNIMGVAKASLDASVRYLAMDLGAIGVRVNAISAGPIRTVSARGVSGFSDSISLVEE
                     RAPLKRATQAEEVGDTAYYLFSNLSRGVTGEVIHVDSGYHIIGF"
     gene            complement(9463..10737)
                     /gene="dltD"
                     /locus_tag="U0290_002024"
     CDS             complement(9463..10737)
                     /gene="dltD"
                     /locus_tag="U0290_002024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464496.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltD"
                     /protein_id="HEM2302063.1"
                     /translation="MKKKLWMTFGPLLVAFAVFLFVLFGPSSLFSKVSSETVEKSATS
                     MNESVIQGLDIQKKALQEGNYLPIYGSSELSRVDPFHPSVVSKKYNQGYTPFLLGRPG
                     TQSLSHFLDVNALGDDLKGKKVAVVLSPQWFQPKGVSDPSFGANFSPLHAYKFALEDT
                     KNTPERRYAAKRLLSFQVVQSDSTLKKLLENIVAKGPKKPHDPKLLNITGNIELKILE
                     RKDDLESKYIIGSKQDRVNKGLKELPETLDYQKLDELAKETGERSTGNNPFQVKEHYY
                     QKKIKPIEGKLKNSRKDLRYDQSPEFADLQLLMDAFKKAGADVIFINPPINGKWIDYI
                     GMDKQGLDDYYAKTKEQIESQGFRYYSLEEYQNDAFFLEDPIHLSWRGWVKIDQVLAD
                     FVKEPMQTNYKPTPKEYYFKEHPENGPKKDRK"
     gene            complement(10737..10973)
                     /gene="dltC"
                     /locus_tag="U0290_002025"
     CDS             complement(10737..10973)
                     /gene="dltC"
                     /locus_tag="U0290_002025"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464497.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltC"
                     /protein_id="HEM2302064.1"
                     /translation="MAFRENVLEILEEITETDEVVQNTNIKLFDEGLLDSMATVQLLI
                     EIEEKLDITVPVSEFDRDEWATPEMIITQLEALK"
     gene            complement(10999..12183)
                     /gene="dltB"
                     /locus_tag="U0290_002026"
     CDS             complement(10999..12183)
                     /gene="dltB"
                     /locus_tag="U0290_002026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464498.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanyl-lipoteichoic acid biosynthesis protein
                     DltB"
                     /protein_id="HEM2302065.1"
                     /translation="MSLPYGTILYFGVLVLFLIPIIVAGLLGKRLPIYNAFVTLVFLY
                     FMFSASPVQGATFIFFVFWQLALVRLYFHYRQEKKQNHGGVFVIAVILSILPLIISKV
                     VPILGDNVTMVGFLGISYLTFKAAQMIIEIRDNLIKQYNAWDFVNFLLFFPTISSGPI
                     DRFRRFKKDVDNPPSKEAYLALLNRGIFLIFLGFLYKFIIAYLVNKHFVVPLDIAITH
                     HVDTTKSLIGYMYAYSMYLFFDFAGYSAFAVGVSYLLGVQTPMNFNKPFAARNIKEFW
                     NRWHMTLSFWFRDYVFMRFVFWVTKKKWFKSKFTIAYLAYFVNFFIMGVWHGLHWYYI
                     VYGLYQATLIVGFDLFERFNKKHKFYPKNKITYVIGVFITFQFVCFGFLIFSGILDKI
                     NF"
     gene            complement(12180..13712)
                     /gene="dltA"
                     /locus_tag="U0290_002027"
     CDS             complement(12180..13712)
                     /gene="dltA"
                     /locus_tag="U0290_002027"
                     /EC_number="6.1.1.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464499.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-alanine--poly(phosphoribitol) ligase subunit
                     DltA"
                     /protein_id="HEM2302066.1"
                     /translation="MTTSIIERIDAWAEKTPDFPCYEYAGTRLSYKELKRQSDAFGSF
                     LLKNLNTDKEKPIIVYGHMSPLMLVAFLGSIKSGRAYVPVDVSMPVERIEQIKKAADP
                     SLFICTEELPSNLTITGCPVLTQDQLMDALEKHFGEVPDKEACVKNDDNYYIIYTSGS
                     TGNPKGVQISQNNLVSFSNWILQDFSLSQGLRFLNQAPFSFDLSVMDLYPSLLSGGTL
                     VPLDKTITANMKDLYREIPAQNLDVWVSTPSFADLCLLDDNFNQENNPGLIRFLFCGE
                     VLAKKTASELLNRFPDAVIYNTYGPTEATVAVTQVKVTREVIDAYPSLPLGVIKPDMR
                     LHIVDQETGEVLPEGEKGEIVLIGASVSKGYLNEPEKTDQVFFDYKGYQAYRTGDSGI
                     IKDGYLFFQGRLDFQIKLHGYRIELEDIENNLKKVSYIQNCAIIPKMKDEKVDMLVAQ
                     VIPTNHDFEKEYQLSAAIKNELKEFMPAYMIPRKWIYKTEFPLTMNGKIDRKALNSEV
                     NK"
     gene            complement(13749..>13837)
                     /locus_tag="U0290_002028"
     CDS             complement(13749..>13837)
                     /locus_tag="U0290_002028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003761469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="teichoic acid D-Ala incorporation-associated
                     protein DltX"
                     /protein_id="HEM2302067.1"
                     /translation="FYLVVLLGLLWFYGFKNPEGAKFIYNEF"
BASE COUNT         4345 a         2315 c         2817 g         4360 t
ORIGIN      
        1 tagagattgg tcacttagac tagtctcttt tttttatgcc aaaattctta ttgagtaaca
       61 agtcttcttg tgatacattt atcaagtaac gtttttgtag aaatgaggag aaaaacatgg
      121 aaatcattgc gacagcagat tcaatgaaac aagctgaaca attgcttcgc gcgggggtag
      181 acagactata tgtaggtaat agccaatttg gtttaagatt gccgcattca ttttctgtcg
      241 aagaattacg tgaaatagtt catttagcac atcaagaagg aaagaaagta actgtagcag
      301 taaattcgtt aatgcataac gaacatatgg aagagttacc gggattttta gagcatcttg
      361 cagatatgaa agtggatgca gtaacgtgcg gtgatccagg ggcaattatg cttttgagtg
      421 aaatggctca accgattccg tttatttatg acgcccaaac atttgtaact agcgcagaac
      481 aaatctcgtt ttgggaaaaa caaggagcga ttggtgcggt acttgctcgg gaactaacag
      541 aaggcgaaat caaagccatt gcaagtagcc ttactatccc agttgaagtt ctggtttatg
      601 gaccaacatg cattcaccaa tcgaaacgta aactagtaac gaattatgag cgtattgtcg
      661 aactggaaga tgatacatcg aaggaacgtg gtctttattt acgcgaacct aatgatgaaa
      721 caagtcaatt accaatctat gaagatgagt ctggaacaca tatttttgct tccgaagatg
      781 tttcacttgt cccttatttg gcggacttat atgaggctgg attgaaaaca tggaaactag
      841 atggtgttct tgcagaatca gagaattttg ttcaaatcgc atcgctgtta gttgaagcga
      901 aagaagctgt tatgaaaggt caatttgtcg cagagtattt tgtgaataaa ttaacggaac
      961 ttcagcctcc aacacgaaaa ctagacgcag gattttattt gaaaaatccg gatgatgtga
     1021 aataggggga atagcataaa tgagtaaaat attaaaaaaa ccagaagtgc tagctccggc
     1081 tggcaactta gaaaaattaa aaattgccat tcgctatggt gcggatgctg tatatattgg
     1141 tggtcaggct tttggtcttc ggtcacgagc aggtaatttt agctttgaag aaatgaaaga
     1201 aggtatcgct tttgcgcatg aacgaaatgc aaaagtgtac gttgcggcaa atatggttgc
     1261 gcatgctggt gatacagaag gtgctgggga atttttccga acattacgcg atattggtat
     1321 tgatgcagtg attgtatcgg atccagcgct cattagcatt tgttttcaag atgcgccagg
     1381 gttaccagtc cacttatcta cacaagcctc ggcaacaaac tataagacat tagaattttg
     1441 gaagaagcaa ggtcttgaac gagttgtact tgctcgtgaa gttagcatgc aagaaattca
     1501 agaaatcggc gaaaaaacgg atgtcgaaat ggaagcattt atccatgggg caatgtgtat
     1561 ttcttattct ggtcgttgta ctttatcaaa tcatatggct aatcgtgatg cgaaccgtgg
     1621 cgggtgtgcg caaagttgtc gctggaaata tgacttgttt gaaattgata atggtgtctc
     1681 gaaaaattta gtggatactg atgaagaacc gttttcaatg agcgcggttg atttatcaat
     1741 gattaaatac attccggata tggtaaatgc tggtgtggat agtttgaaaa tcgaaggacg
     1801 aatgaagtcc attcattatg tttcgactgt cgcaagtgta taccgtcgtg ccgtagatgc
     1861 ttactgcgcg gacccggaaa attatgtatt cgatccagct tgggaagaag aattatggaa
     1921 agttgcacaa cgcgaactat ctacaggatt tttctataaa gaaccaaccg aggacgaaca
     1981 actatttggg aaaacgcgga aaattcctca atatgctttt gcggcgcaag tattggaata
     2041 tgacgagaaa acgaaaatcg ctactttaca gcaacgaaat aattttggtg ttggagaaga
     2101 aattgaattt tacgggccag gagatactgg atttaagcag attgtagaag tactttggaa
     2161 tgaagatggt gtagaaattg accgtgctcc aaatgcaatg atgaccatta aaatgccggt
     2221 agataaacct gtgaagccat tttactttat gcggaagaaa aaataaaaat ctcatgctgc
     2281 agtaggattg tcgtgtactc cctaagtaag gtataatggg gtaagtacat atgaaggagg
     2341 agattaatta tgataggatg gattattgct atcgctgttg ttgttatttt agtattgatt
     2401 tattttggtc tatacaacag ccttgtaaaa taccgtaacc gtgtggatga aacttgggcg
     2461 caaattgacg tacaattaaa acgtagattt gatttaattc ctaatttagt tgaaacagtt
     2521 aaagggtatg caaaacatga aaaagaaaca ttaacacaag taattgaagc tcgtaataaa
     2581 atgatggaag ttcctgctga caatcgtcaa ggtcaaatcg aagcggacaa tatgttaagt
     2641 ggagcgctta aatccatttt tgcattagga gaagcttacc cagatttaaa agcaaatact
     2701 tctttcatcg aattgcaaca tgaattaact actacggaaa ataaagtggc ttattctcgc
     2761 caactttata atacaaccgt aatgacttac aacacaaaag tacaatctgt accaacaaac
     2821 atcgttgcaa aactgcataa ctttacagaa cgtgacatgc tttctattcc tgaagtagaa
     2881 cgcgttgcac caaaagtaga gttttaagcc atgaaggaga gcgaaaatta tgctatttga
     2941 acaaattgca gcaaataagc gaaaaacaat ttttattatt cttggctttt tcattttcgt
     3001 tcttatggtt ggcgctgcta taggtataat tgtttggaat aactatctga atgggctcat
     3061 actcgcggca gtgattggtg cattttatat tttgattatg gtaatgagca gttcatctgt
     3121 tgtcatggcg atgaaccatg cgaaagaagt tacatccaaa gatcaagcgc cagttttgtg
     3181 ggatacagta gagagtatgg caatggttgc tggtattccg atgccaaaag tatatatcgt
     3241 tgaagatgca agtccgaacg catttgcgac ggggatttct cctgaaaaag gagccgtggc
     3301 ggttactaga ggattgctta ataaattaga acgttatgaa cttgagggcg ttattgcgca
     3361 tgaaatttct catattcgta attatgatat tcgattatca acgattgcca ttgcgctagt
     3421 agctgttatt gcgattctta gtgatttagc tatgcgaatg attttctggg gaagcctaac
     3481 tggtggcaga aataatcgta agagtgacaa taataacagt ggcggggcac aagcgattat
     3541 ctatatcgtt gcactcatat ttgttatttt ggcgcctatt attgcaacag ctatccaatt
     3601 tgctttatct cgtaatagag agtatttagc tgatgctagt gcggtagaat taaccagaaa
     3661 tcctgatgga cttatccaag ctttacaaaa aatcagcgga gattcgaaaa aaatggaaga
     3721 agttagtgct tctagtgagt ccatttactt tgcgtcacct ctaaagtcta aaaaaaataa
     3781 gccaggtctt tttgactctc atccgccaat tagttcgcgg attgaacgct tagaaaatat
     3841 gtaaaaaaaa agaagcaacc caggaatggg ggtgcttctt ttttataagt ttccgatgta
     3901 tttccagtga gcctggccat ctggagcatc gattaattct actttttgtt ggagacgcca
     3961 ttttttcatt tgacgctcga tttgttgttc agaaacacca taaaaatctg ccatagtagc
     4021 ggaagaagta acttttactt ttgccaagta ttcttccatt tgcgggcgtt cttctggttg
     4081 tggggcatca tttaaaagct cggataaaac atgcacataa acttcataac gatgaagccc
     4141 acttagtttt aatccagcat cttctatatt tttattgaaa aagactacgg taggattttc
     4201 atgaatttcc atttcttgag ctactttttg atcgccaata taagcacgct tggcaactgt
     4261 agaagctaga tcttttttga attctgataa atctagaccg gtggaaacgg cgatatcata
     4321 aagtacttct tcgctagcga tatctttatt ttcaaggaag taggctgctt gtattttgcg
     4381 caagaatgta attccttgtt tttttccttg tagttcagcg gctttgactg caagacaaga
     4441 aatataggaa aggtgcgccc ctatttgttg ttcttttaag cttaggttac tatttcctgc
     4501 gcgcttttgt ttacatacaa atgtctgcaa attattatgc agaacatagc gcaatttgaa
     4561 atagttcccg tactccattt gtaatcggag catattcgct tcaatattcc aacagtcatc
     4621 acaagctgga tcaaaaaata gataaatttc gattggcttg gaatttgcta ctgactgata
     4681 atataaattt tggttaatca tttgctatca cctgattttc aaattctaaa tatcttcaaa
     4741 cagatactca tttcaatgta ccagtgtgaa aagaaataat tcactgctca gtaaaagctg
     4801 atacaaaatt tgtttttgta acttacatat ctattttatc agcgtaatgt aaatttaaca
     4861 aataattgtc attggcttaa catatttatt cgttattttt taagaatttg tgtctttttg
     4921 ctataaaagt atctattctt acttattatt ttcatatacg tgatgataaa atcgtgctac
     4981 tttattttcg gcaggttgat tggtgatttg atattcttta agtagtttgt caaaaacctc
     5041 ttttccttta tcataatcag acacttcata ctctaagtcg aaatctgata tagaaccata
     5101 aaaattctta tcaaacacaa gtaagccttt tttataatct ttttctgcgc gaattgtttt
     5161 gagtgaaccg aaaacctgta agtcttcatg attgattcct agttctttta acgtgtcacg
     5221 aactggtcca actggaatat ttgctccaga gatgatggca cttgcttggt cctcgccaag
     5281 aatttgagta gtttccatca gtccacgtgc ttctggggtt ttgagtgtta attggtactg
     5341 tgtttctaat tgtcgaattc gaagagcgga atgacgttct tttaacccga aatttgctgt
     5401 gtctaaataa taatttgttt gctcaaagaa atcttcttct ttcactcgaa aactttctat
     5461 taatgtatcg tattcttctt tggttagtag gttacgaaat tcgatttcta gttctttgac
     5521 catgatagtt cagctccctt taatgaaatg tcgcatctaa atcttgcgca taaaattgaa
     5581 ttgctttctt gtaacttaaa atgtctgcat cactcgttgt ttgtgtcaag agtattaagg
     5641 cttcctgcaa agcttctttt tctaagcctt gattgtattt agccataact gaaaaagtgc
     5701 gcaaggcatt attatctgga aattcttgta aagcggtttg gaaaagcagg ctagcttttt
     5761 cgggctgccc tgtaatccgg taagtactac caaggcctat atatgcttct ttacgagaat
     5821 caactggaag accgagctgt atggctttct cataaaaggg gattgcagca tcttctttac
     5881 cgagtgcgtc atgggcccat gctgcataat aatgaagttc tgcgttatcg gagttgtttt
     5941 ttaattcagc aagtgcttga gtgcgcgcag tttcgtaatc gccgttttga agtaatgtta
     6001 gaatcatttt catcctcctt ttagttgtcg tttgaatgct tcggttttat tttaccacgg
     6061 gattgaaaaa aaggttactt taagcaaggt ggattaactg cttttgtgtt aaaataaaac
     6121 tgatgttgca taaatttaat catgaatata cttgaggtga gcgatttgaa tcattgggaa
     6181 gactttttag cgccatacaa acaggctgtg gaagaactta aaattaaact taaaggaatg
     6241 cgttcacaat ttgagcttga aaataatcat tcgccaattg aatttgttac aggccgagtg
     6301 aagccggttg cgagcatatt agataaggcc aatcaaaagc atattgcact agatcactta
     6361 gtagaagaaa tgcaggatat tgcgggactc cgtatgatgt gccaatttgt agatgatatt
     6421 gaagtagtag tgcgcctttt aagacagcgg aatgattttc gaattgtaga agaacgcgat
     6481 tatattacaa acaagaaacc cagtggttac cgctcctatc acgttgttat tgagtaccca
     6541 gtggaaacaa ttcaaggaga aaagaaaatc ttagctgaaa tccaaattag gacacttgca
     6601 atgaattttt gggcaacgat tgagcattcg gtaaactaca agtatcaagg cgaatttcca
     6661 gaagcaatca ataaacgttt aaagcgcgct gctgaggctg cttttcaact agatgaggaa
     6721 atgtcgcaaa ttcgcgaaga aatacaagaa gcgcaagttt atttttctca aaataaagac
     6781 gtatcaaagg ataaaaaagc agtgcatcaa gtaatgccaa agaaaaataa gtaattagtt
     6841 gtaggaatag gggcgaatag aaataatgaa atatatgatt acttccaaag gggacgaaaa
     6901 atccgatttg ctgcgactaa atatgatcgc aggttttggg gaatatgaca tggaatatga
     6961 tgacgtagag cctgaaattg ttatttctat tggtggagat ggaacgtttc tgtctgcttt
     7021 tcatcaatac gaggaacgct tggatgaaat tgcctttata gggattcata ctggtcatct
     7081 aggcttttat gcggattgga gaccagctga ggcaaataaa ttagttaagc ttgtagcaaa
     7141 aggagaatat cagaaagttt cctatcctct tctcaaaaca accgtgaaat atgggattgg
     7201 caaaaaagaa gcaacatatt tagcgcttaa tgaatcaact gtaaaaagtt caggaggccc
     7261 ttttgtagta gatgttgtga ttaacgatat tcattttgaa cgatttcgtg gagatggcct
     7321 ttgtatgtca acacctagtg gaacaacggc ttacaataaa tcgctaggtg gggcacttat
     7381 gcatccttct attgaagcaa tgcagttaac agagatggca tcgattaata atcgagtgta
     7441 ccggacaatc ggtagcccac tagtttttcc gaaacatcat gttgttagtt tacaaccggt
     7501 taatgacaag gactttcaaa tttctgtaga tcatttgagc attttgcacc gggatgtaca
     7561 agaaattcgg tatgaagtat ctgcaaaaaa aattcacttt gccagattta aatcatttcc
     7621 attttggcgt cgtgtacacg attcgtttat tgaagattaa gctagcagga gggagcatgt
     7681 gtttttagaa tggaaagtcg aaacggaaga agatggactc ttacttcgca cgtttttgaa
     7741 gagtaaacat atttcgaaac aattattaac tgccgtgaaa tttggggcag aggggaaaat
     7801 tgaagtaaat aacaaagaac aaaatgtttt gtatcacgta aaagtaggcg ataaagtgag
     7861 gcttactttt ccaacagagc aacaaaatga acgattgctt gcggaatata ccgatttaga
     7921 tattattttt gaagatgatt ttttattaat tatcaataaa ccagctggta tggcttctat
     7981 tccatcacaa tatcatccaa atggatccgt tgcaaatttt gtcaaagggc attatgaaac
     8041 gcaaggactg acgaatgcta ttcatattgt aacaagactc gatcgtgaga cgtctgggtt
     8101 aatgttaatc gccaaaaata gatttgctca tgctagatta agtacgtttt tgcaaaaagg
     8161 attactaaaa cggcgctatc aagcatttac atcaggagtt ttagtagaac aaaagggttc
     8221 gattgaagcg ccaataggac gcaaagaagt gagtataatg gaacgttttg ttactcctga
     8281 aggtaaatat gccaaaacaa attatgaggt tctcgcgcgc tatagagcat ttgaccatgt
     8341 ggctattcaa cttgagacag gaagaacaca ccagattcgt gtgcatttct cttatattgg
     8401 acatccgctt attggcgatg atatgtacgg aggagatacg aatttgttga aaagacaagc
     8461 gctgcactca tgtcatctgc atttagtcca ccctttgaca gaaaaatata tggcgtttga
     8521 tctaccttta ccagcagata tggaagagat aattcaaaaa tcgaagtaat aagagtttta
     8581 aaaagttatt tggtcatgta aaatggaaga agcgaacaaa tcgcatcaat tttaggagga
     8641 aagaacatga atttatcatt agagggaaaa acatatgttg taatgggagt agctaataag
     8701 cgtagtattg cttgggcaat tgcgcgttca ctaaatgaag ctggagcgaa acttgtattt
     8761 acatatgcgg acgatcgtgc gaaaaaaagc attacagaac tagtaccttc attaagcgaa
     8821 gtaaatcaaa atccacttat cttagcttgt gatgtaacaa gtgaagaagc tattacagaa
     8881 acatttgaaa caattaaaga taaaactggc aaacttagtg gcttagcaca ttgtattgct
     8941 ttcgctaaca aagacttttt aactggagat tatttagaag tagatcgtaa aagcttctta
     9001 caggcacatg aaattagtgc ttactcattc acagctgttg ctcgtgcact aaaacactta
     9061 gaaatgttga cagaagatgc aagtttacta acattaactt accttggtgg ggaacgtgta
     9121 gtagaaaact ataatattat gggtgtagca aaagcttctc tggatgcaag tgttcgatac
     9181 cttgctatgg acttaggggc aattggtgtt cgtgtaaatg ctatttctgc aggaccaatc
     9241 agaacggtat ctgctcgtgg cgttagcggt ttctctgatt ctatttcact agtggaagaa
     9301 agagccccac taaaacgtgc gacacaagcg gaagaagttg gcgatacagc atattactta
     9361 ttcagtaatt tatctcgagg cgttactggc gaagtaattc atgtagatag cggttatcat
     9421 attattggat tttaaagaaa aaagaccgta agtagttaaa aactacttac ggtctttttt
     9481 tggtccattt tctggatgtt ctttaaagta atattctttt ggtgttggtt tatagtttgt
     9541 ttgcattggt tctttaacga agtctgctaa tacttggtcg atttttaccc aaccgcgcca
     9601 gcttaaatga atcggatctt ctaagaaaaa agcatcattt tgatattctt ctagagagta
     9661 gtaacggaaa ccttgactct caatttgttc ttttgtttta gcataatagt catctaaacc
     9721 ttgtttgtcc ataccaatgt aatcaatcca ttttccattg ataggcgggt taatgaaaat
     9781 gacatctgca ccagcctttt tgaaagcatc cattagtagc tgtaaatcag caaactcagg
     9841 agattggtca taacgtaaat ctttgcggct attttttaat ttaccttcaa ttggtttgat
     9901 tttcttttgg taataatgtt ctttgacttg aaaagggtta ttaccagtac ttctctcccc
     9961 agtttcttta gccaattcat ctagtttttg gtaatctaaa gtttctggaa gttcttttag
    10021 gcctttgttt acgcgatctt gtttggaacc aatgatgtat tttgattcta aatcatcttt
    10081 acgttccaaa atcttcagtt cgatattacc agtaatgttt agaagttttg gatcatgagg
    10141 ttttttaggc ccttttgcga caatgttttc gagtaatttt tttaatgtag agtcactttg
    10201 aactacttgg aaagataata aacgtttagc tgcatagcga cgttcaggcg tatttttcgt
    10261 atcttctaat gcgaatttat atgcatgaag aggggaaaaa ttggcaccaa atgatgggtc
    10321 agaaacgcct ttaggttgga accattgtgg agataaaact accgctactt tttttccttt
    10381 taaatcatca ccaagtgcat ttacgtctaa gaaatgactt aatgattgtg tacctgggcg
    10441 accaagtaaa aatggtgtat agccctgatt gtattttttt gagactacgc taggatgaaa
    10501 tgggtcgacg cgggaaagct ctgaagaacc ataaattggt aaatagtttc cttcttgtaa
    10561 agcttttttc tggatgtcta agccttggat gacggattcg ttcattgatg tagcgctttt
    10621 ctctacggtt tcagaagaaa ctttagagaa taagctacta ggtccgaata gaacgaaaag
    10681 gaaaaccgcg aatgcgacca gtaaaggccc aaatgtcatc cacagctttt ttttcattat
    10741 tttagcgcct cgagttgtgt aataatcatt tcaggagtag cccattcgtc gcggtcaaat
    10801 tcggaaacag gtacagtgat atctaatttt tcttcaattt caattaaaag ttgaaccgta
    10861 gccatagaat caagcaagcc ttcatcaaat aatttaatat ttgtattttg tactacttca
    10921 tccgtttctg taatttcctc taagatttct aatacatttt cacgaaaagc cattataaat
    10981 taccaccttt agttagtttt aaaaattaat tttatctaaa atacctgaga atatcaggaa
    11041 tccgaaacaa acaaattgga atgtaatgaa aacgccgatt acataagtaa ttttgttttt
    11101 tggatagaat ttgtgcttct tgttaaagcg ttcgaatagg tcaaatccaa caattagtgt
    11161 tgcttgataa aggccataaa cgatgtaata ccaatgaagt ccatgccata cacccatgat
    11221 gaaaaagtta acgaaatatg ctaggtaggc aatagtgaac ttacttttaa accatttctt
    11281 ttttgtaacc caaaatacga aacgcatgaa tacataatcg cggaaccaga aagaaagcgt
    11341 catatgccaa cgattccaga actctttaat attgcgagct gcgaaaggtt tgttaaagtt
    11401 cataggtgtt tgaacgccga gtaagtaact aaccccaact gcaaaggcac tgtaacctgc
    11461 aaagtcaaag aataaataca tactataggc atacatataa ccaattaaac tctttgttgt
    11521 gtctacatgg tgtgtaatcg cgatgtctag tggaacaaca aaatgtttgt ttactaagta
    11581 agcgataatg aatttgtaga gaaaaccaag gaagataagg aatattcctc gatttaataa
    11641 agctagataa gcttctttac taggcggatt atccacgtct tttttaaagc gacggaatcg
    11701 gtcaatcggt ccggatgata tagtcgggaa gaatagtaag aaattaacaa aatcccacgc
    11761 gttatactgt ttaattaagt tatcgcgtat ttcaataatc atttgtgccg ctttaaatgt
    11821 taagtaggaa atccctagga aaccaaccat tgtaacattg tctcctaaaa ttggaacaac
    11881 tttagagata ataaggggga gaatagacag aatcactgct atgacgaata cgccgccgtg
    11941 gttctgcttt ttctcctgcc tgtaatggaa gtaaagtcgt acaagagcaa gttgccagaa
    12001 gacaaagaag ataaaagtag ctccttggac tggacttgct gagaacataa agtataaaaa
    12061 tacgagtgtc acaaaagcat tataaatcgg taatcttttt cctaacaaac cagctactat
    12121 gataggaatc aaaaatagta caagtactcc aaaataaagg attgtgccgt atggtaaact
    12181 cacttgttaa cctcgctatt aagcgccttg cgatcgattt tgccattcat agttaacggg
    12241 aattccgttt tgtaaatcca ttttcttggg atcatgtatg ctggcataaa ttctttcagt
    12301 tcatttttta ttgctgcact tagctggtat tctttttcga aatcatggtt agtagggatg
    12361 acctgtgcga ccaacatatc taccttttca tctttcattt taggaataat agcgcagttt
    12421 tgaatgtaac ttactttttt taggttgttt tcgatatctt ctaattcgat gcgataacca
    12481 tgcagtttaa tttggaagtc aagacgtcct tggaagaaca gataaccgtc tttgataatg
    12541 ccagagtctc ctgtgcgata agcttgataa cctttatagt cgaagaatac ttggtctgtt
    12601 ttttcaggtt catttaagta acctttagaa acgctagcac caatcaggac aatttctcct
    12661 ttttcgcctt ctggaagaac ctcaccagtt tcttggtcaa cgatgtgtaa acgcatatct
    12721 ggtttaataa cgccaagtgg taagcttgga taagcatcga taacctctcg agttactttt
    12781 acttgagtga cagccacggt tgcttctgta ggtccgtatg tgttgtaaat aactgcatct
    12841 gggaaacgat tcagcaattc gcttgctgtt ttcttggcaa gtacttcacc acagaataag
    12901 aaacgaatta agccagggtt attttcttgg ttaaagttat cgtctagtaa gcacaaatca
    12961 gcaaaagaag gagtagaaac ccatacatcc aagttttgag caggtatttc acgatataaa
    13021 tctttcatat tcgcagtaat tgttttatca agaggtacaa gcgttccacc cgatagtaaa
    13081 cttggatata aatccataac ggatagatcg aaggaaaagg gtgcttggtt taagaaacgc
    13141 aatccttggc ttaaagaaaa gtcttgtaat atccagttac taaaacttac tagattgttt
    13201 tgactgattt gaaccccttt aggatttcct gtacttccgg atgtgtaaat aatatagtag
    13261 ttatcatcat tttttacaca tgcttcttta tctggaactt ctccgaaatg tttctctaag
    13321 gcgtccatta gctgatcttg tgttagtacc ggacaaccag taatagtaag gttactaggt
    13381 agctcttctg tacaaataaa caaagaagga tcagctgctt ttttaatttg ttctatacgt
    13441 tcaactggca tagaaacatc tactggtaca taagctcgac ctgatttgat agagcctaaa
    13501 aatgcaacta gcattagggg agacatatgt ccgtaaacga taataggttt ttctttgtca
    13561 gtatttaggt tttttagtag aaaagagccg aatgcatcag attgtcgttt tagttcttta
    13621 taggaaagac gtgttccagc atattcatag caagggaaat ccggtgtctt ctctgcccat
    13681 gcatcaattc tttctatgat actcgttgtc attattgata ttcccatttt taacagtcct
    13741 ttcttctttt agaattcatt gtaaatgaat ttcgcacctt cagggttttt gaaaccataa
    13801 aaccaaagca atcctagcaa aacaacaagg tagaaaa
//
LOCUS       DASDYO010000085        13784 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.085, whole genome shotgun sequence.
ACCESSION   DASDYO010000085 DASDYO010000000
VERSION     DASDYO010000085.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13784)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13784)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13784
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.085"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..933
                     /locus_tag="U0290_002029"
     CDS             <1..933
                     /locus_tag="U0290_002029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEM2302068.1"
                     /translation="IQMFISEQFIARVIPKNKFLAVIVGSLIGVFFPSCECGIVPIVR
                     NLLAKGVPLHAGIAFMLTAPIINPVVLFSTYVAFGSTWEVPLLRVAGSLVVALVVGNI
                     IAYFYKGTGLKERFLKYEAASEKVAVPATNLALAGGPSESTTTNFQVLTSDGALTEDA
                     HKGHAHHHHGEEHAHTKMTLSQKIWHTVQHAVDEFFSVGKYLVFGALIAAAMQTYIKT
                     STLVSIGHGPILSILLMMVLAFVLSLCSEADAFIGASFRSVFSTQSIVAFLVFGPMLD
                     IKNLMMMLGAFKAKFVLLIVTSVTIVVFLYALVI"
     gene            952..1791
                     /locus_tag="U0290_002030"
     CDS             952..1791
                     /locus_tag="U0290_002030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464447.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TIGR03943 family protein"
                     /protein_id="HEM2302069.1"
                     /translation="MFRVFILFGFGFYLMQLHISGDISKYINMKYAYLSFSAMIAAFL
                     LAIIQLIMVFRDEDIGAKTEHMGHTHDGENTILKKIMVYGLLSYALIAGFLFPVATLD
                     STIVSAKGFHFPKNNAAGDDPYAQNQFLRPDTSGYFGETDYEKMMAKEKAEIIDQNPI
                     KVNDSNYLMTMEILYNYPGEFTGKQIEFTGFVYNDEVTQDNNLFLFRFGIIHCVADSG
                     VFGMLVQMPEKTDLKNDTWLTVKGTITQEYYSPFKMNIPSVQVESYKEVAKPKSVYVY
                     RKY"
     gene            1880..2800
                     /locus_tag="U0290_002031"
     CDS             1880..2800
                     /locus_tag="U0290_002031"
                     /EC_number="2.7.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464448.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I pantothenate kinase"
                     /protein_id="HEM2302070.1"
                     /translation="MNDYNHYFHFPREEWRKLEVSKDQILTAEELEEIRGLNDRISLQ
                     DISEIYLPLIKLIAIQYHEAIFIHGEKMEYLKKKESRAPFIIALAGSVAVGKSTTARV
                     FKLMLDRWFSKTRQVELVTTDGFLYPNKVLEERGIMDKKGFPESYDRDRFAKFLTDLK
                     ANKEDVEIPLYSHFTYDVLDETRVIHNPDIVIIEGINVLQADQHESLFPSDFFDFSVY
                     MDANEADIKKWYLERFFMLRETAFQDESSYFHPYTKISKQEAETFALGVWDTINGVNL
                     KENIEKTKYRADLVLQKGTDHLISDIYLRK"
     gene            2916..3638
                     /locus_tag="U0290_002032"
     CDS             2916..3638
                     /locus_tag="U0290_002032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012951409.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302071.1"
                     /translation="MSEIAIKVSNLDVKIGKKQILTNMTLEIEKGEIFGLIGPSGAGK
                     TTLVKTIIGMEKATNGTTEVLGKAMPNLPVISKIGYMAQSDALYTDLTAKENLDFFAS
                     LYSIKGAAKKDRMNYAATLVNLQQDLTKKVNNYSGGMKRRLSLAISVLADPDVLILDE
                     PTVGIDPELRKTIWAELGDLKANGKCILVTTHVMDEAEKCDRLAMIRNGQIIAVGTPQ
                     ELSSKTSSGKLEDAFLEFGGKH"
     gene            3638..4753
                     /locus_tag="U0290_002033"
     CDS             3638..4753
                     /locus_tag="U0290_002033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464450.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302072.1"
                     /translation="MRIFAIVKRIINQFRRDKRTLALMFLAPLLLITLLTYLFEGDTV
                     KPVVGVSGLSDSMVKELKANDLTIKTYSENTDVTAKIKDANLDAFFKQNGEKLEVTYE
                     NSEPSLSKEIGLKLQKAMMTEQQAQVKKQAKATGESLAKAGIDPNTIPSLTQSPEKLS
                     ISTNYVYGDKGTTFFDTISPIFIGFFVFFFVFLIAGISFLRERTTGTLERLMATPIKR
                     IELELGYLIGFGIFALLQSILVAVFSIQVLGMMQNGSLFYVLLITLTLGMVSLALGIL
                     LSTFANNEFQIVQFIPIVIVPQVLFCGIFPLDGMADWLVWIAHIMPLYYGANALTSIM
                     VKGEGFASFATDFYILLGFVLVFVILNIFALKKYRKV"
     gene            4776..5432
                     /locus_tag="U0290_002034"
     CDS             4776..5432
                     /locus_tag="U0290_002034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464451.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2302073.1"
                     /translation="MDAEGDIIRQMLDLTEKETKMSEKQRRIVAASIELFAEKGYAGT
                     STNEIAKKAGVAEGTIFRHYKTKKDLLMAITMPTLIGGVIPFLAQSFVKEVFESEYPD
                     FQSFIREIIVNRFDFAKENGKVIKIYFMELFYHDELRIQFSEIFMTHVKGQFDQMIDY
                     YKERGEIVDMPNSTIMRALITNIVGFMLTRFVVMPDVEWDDAKEIDDTVAYIMRGLGK
                     "
     gene            complement(5464..7425)
                     /gene="ltaS"
                     /locus_tag="U0290_002035"
     CDS             complement(5464..7425)
                     /gene="ltaS"
                     /locus_tag="U0290_002035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464452.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoteichoic acid synthase LtaS"
                     /protein_id="HEM2302074.1"
                     /translation="MKDWKIKIQTFLSKNYGFFVLAVILYWLKTYIAYQLEFKLGIEN
                     LMQQILLFINPLSGAIFFMGLALFAKGRRSFIWIIVIDFLMSFILYANIVYYRFFSDF
                     ITLPNLNAKQMQNMGDMGSSITALLSWHDIIYFADIIILIALLAFRFVKPNKTARIRA
                     RKVVGVLTLGIAMFFGNLGLAEIDRPQLLTRTFDRNYIVKYLGMTNYQIYDAVKSTES
                     STQRALADSSDVTEVLNYTKSKYAAPNPEYFGKAKGKNVIYIHLESFQQFLVNYKLNG
                     EEVTPFINSFFKDQNTLSFTNFFHQTGQGKTADSEMLLENSLYGLPQGSAFTTKGQNT
                     YESASAILGQQGYTSAVFHGNYKSFWNRDEIYKQFGYDNFFDASYYDMNEADVSNYGL
                     KDKPFFKESEEYLSSLQQPFYTKFITLTNHFPYPIDEKDASIAPATTGDSSVDTYFQT
                     ARYLDESVKSFVDYLKKSGLYDNSVIIMYGDHYGISDNHEEAMTKILGKDYNTFENAQ
                     AQRVPLMIHVPGVQGGVQEQYGGQVDLLPTLLHLLGVDNKEYLQFGTDLLSKDHKQLV
                     PFRNGDYITPTYSMIGGNMYNQQTGEPIATETKEMKETKEKVAKELELSDSVLQGDLL
                     RFYAPDGFKKVDPSKYNYNKKKSTDSSDK"
     gene            7684..8307
                     /locus_tag="U0290_002036"
     CDS             7684..8307
                     /locus_tag="U0290_002036"
                     /EC_number="3.2.2.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464453.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-3-methyladenine glycosylase"
                     /protein_id="HEM2302075.1"
                     /translation="MEAIITKEFFEDKTTIELARDILGMRLVHQTDEGILSGLIVETE
                     AYLGATDMAAHSFQNLRTKRTEVMFSSPGRIYMYQMHRQVLLNFITMPKGIPEAILIR
                     AIEPDEQAKQQMVQNRHGKTGYELTNGPGKLTQALGLSMQDYGKTLFDSNIWLEEAKL
                     PHLIEATNRIGVPNKGIATHFPLRFTVKGSPYISAQRKSRILTDIWK"
     gene            8416..9084
                     /locus_tag="U0290_002037"
     CDS             8416..9084
                     /locus_tag="U0290_002037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464454.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class A sortase"
                     /protein_id="HEM2302076.1"
                     /translation="MLKKTIAIIILIIGLLLIFSPFIKNGIVKYMSGHETIEQYKASD
                     IKKNNEKDATFDFESVQLPSMTSVIKGAANYDKDAVVGSIAVPSVDVNLLVFKGTNTA
                     NLLAGATTMRSDQVMGKGNYPLAGHHMRDESMLFGPIMKVKKGDKIYLTDLENLYEYT
                     VTETKTIDETEVSVIDDTKDARITLITCDKPTETTKRFVAVGELEKTEKLTKELENKY
                     FPSK"
     gene            9197..9928
                     /locus_tag="U0290_002038"
     CDS             9197..9928
                     /locus_tag="U0290_002038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464455.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2302077.1"
                     /translation="MKLTVFGHWGGYPLANEGTSSYLLEEAGFKLLIDVGASAVSIMQ
                     NYIDPDDIDAAIISHYHPDHVADVGILQHIRLLSQKKEKPPVLPIYGHKEDERGYSYL
                     EMANVTKAIEYKPDDRLEIGPFKVTFLKTIHPVPCYAMRIEAGDKVFVYTADSAYQDS
                     FIPFSEGADLLVTDTNFFHDLAGKTKVHMASTEVAKIAKEANVKSLLLSHLPEVGDLE
                     VLKQEAAAIYKGEIALASKGFTKTF"
     gene            9952..10947
                     /gene="lplA1"
                     /locus_tag="U0290_002039"
     CDS             9952..10947
                     /gene="lplA1"
                     /locus_tag="U0290_002039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464456.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate protein ligase LplA1"
                     /protein_id="HEM2302078.1"
                     /translation="MYFIDNNNEKDPRINLAVEEFILTELNLDEPVLLFYINKPSIII
                     GRNQNTVEEIDTEYVEKNDVIVVRRLSGGGAVYHDEGNLNFSFITEDDGESFHNFAKF
                     TQPIVEALKRLGVNAELKGRNDLLIDGLKVSGNAQFATKGKMFSHGTLMYDLNLDNVA
                     ASLKPRKDKIESKGIKSVRSRVANISDFMDQEMTTEEFRDLLLLYIFNVEKVEDVKEY
                     KLTAADWEKIHEISAKRYGNWDWNYGKSPKFDLTRTKRFPVGAVDVRLNVQKGIITDI
                     KIFGDFFGVKNVADIEEKLVNTTYKREALDEALADIDVKEYFGNITKDEFLDLLY"
     gene            complement(10987..11592)
                     /locus_tag="U0290_002040"
     CDS             complement(10987..11592)
                     /locus_tag="U0290_002040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464457.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TVP38/TMEM64 family protein"
                     /protein_id="HEM2302079.1"
                     /translation="MTFWQDMMNFFSYDNLMYWLSEYRNLGPLLAFLLPFIEAFLPFL
                     PFIVFVVVNVNAYGLLGGFLISVTAAIAGSLCVFLLARKFGQTRFLRFISGHKQIKRV
                     MEWIDRHGFSPIFILLVMPFTPSSAVNIVAGLSKIKVYQFILALVGGKLIKVFAISYI
                     GYDFVDLIHQPLKLAILAVSVVILWFVGKRLEHWMSGKNLK"
     gene            complement(11719..13776)
                     /locus_tag="U0290_002041"
     CDS             complement(11719..13776)
                     /locus_tag="U0290_002041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014589031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEM2302080.1"
                     /translation="MKKRIQHLDFYFVGIIVIAIFFNFYGIWNDDTVNPYYTAAVTSM
                     VQNIHNFFYGAFDPAGFITVDKPPVALWLQAISALIFGIHGWSVILPQALAGVGSVIL
                     LYVLVKPRFGAWAARITALIMALTPIAVAVTRTNNMDAILVFVLLLATFFLFKAVHRA
                     KIGWLLLSFALIGVGFNVKMLQAFMVVPAFLLFYFIATKLSWRKKLVQLVIALVLMLG
                     VSVSWAVVVDQTAASERPYIGSSQTNSVLELAFGYNGMERLLGQETGTGSNGNVEMGT
                     PPSTNSTDSSNATPPTPPSGSMQDGANGGTPPQGNNGAPPTGAPSNAANGGGNGSKMT
                     GSTGMFGTGNAGPLRLFQTALGDQISWFLPLAIIGMLAIFLVYRNENKRIYQLTSRQK
                     EIVFWAAWLIPVAGFFSIAGFFHHYYLIMLAPPIALLSGVGLVALFRLYQDKENWQRF
                     LLPAAVTLTGGLQAFFVAAYLPVLAVVIGIAALITSIILIVLRPQPSKLTAKITALAL
                     AILLIAPTYWSLTPILYGGNSSLPEAGPQLKQSSGGGFADASVDSDLISYLQKNNTGE
                     TYLFGTTDATTAGPYIIKTKEAVMALGGFNGTDPTLTVKQLKQMIQAGEIKYFYLPSN
                     SKASDSDVVKWIQENGTEIDSSKWSSSGSTDDDTTSSASFNMQGGAQGMNGTGTGTLY
                     QLK"
BASE COUNT         4562 a         2508 c         2677 g         4037 t
ORIGIN      
        1 attcaaatgt ttatatcaga acaatttatt gcccgtgtta tccccaaaaa taaatttcta
       61 gcagtcattg ttggctcgct tattggtgta tttttccctt cctgtgaatg tggcattgtt
      121 cctatcgttc gtaatttact ggcaaaaggg gtaccgcttc atgctggtat tgccttcatg
      181 cttaccgctc ctattatcaa cccagtagta ttattttcaa cgtatgttgc atttggtagt
      241 acgtgggaag ttccgttgct acgtgttgcg ggaagtcttg tagtagctct cgttgtcgga
      301 aatattatcg cttattttta taaaggaact ggactcaaag agcgcttttt aaaatatgaa
      361 gcagctagtg aaaaagtggc cgttccagca acaaatctag cgcttgctgg tggtccttct
      421 gaaagtacga caactaattt ccaagtccta acaagcgacg gagcacttac agaagacgct
      481 cataaaggac acgcgcacca ccatcacggt gaggagcacg cgcatacaaa aatgacattg
      541 agtcaaaaaa tatggcatac cgtacaacac gcagtcgatg aattcttctc tgtaggtaaa
      601 taccttgtgt ttggggcttt aattgccgca gcgatgcaaa catacattaa aacatccaca
      661 cttgtttcca taggtcatgg tccgatttta tccatcttac ttatgatggt tcttgccttt
      721 gtattgtccc tttgctctga agctgatgcc tttattggcg cttctttccg tagtgttttc
      781 tccacacaat ccatcgttgc atttttagtg ttcggcccaa tgcttgatat taaaaatcta
      841 atgatgatgt taggagcatt taaagcaaaa tttgtcttat taattgttac tagtgtaacg
      901 attgttgtct ttttatacgc cttagttatt taaccgaaag aaggtgaaag tatgtttcgc
      961 gtttttattt tatttggatt tggtttttat ttgatgcagt tacatatttc tggtgatatc
     1021 agtaaatata taaatatgaa gtacgcttat ttatcttttt ctgcgatgat agccgcattt
     1081 ctacttgcga ttattcagct cattatggtg tttcgcgatg aagatattgg tgcaaaaaca
     1141 gaacatatgg ggcacaccca tgatggcgaa aataccattt tgaaaaaaat tatggtgtat
     1201 ggtttacttt cttacgcctt gattgcaggt tttcttttcc ccgtcgcaac acttgattcg
     1261 accattgttt cggcaaaggg atttcatttc ccaaaaaaca atgcagctgg tgatgaccca
     1321 tacgctcaaa atcaattttt aagaccagat acgagtggct attttgggga aaccgattat
     1381 gaaaaaatga tggcgaaaga aaaagcggaa atcatcgatc aaaatccaat caaagtcaat
     1441 gatagtaatt acttaatgac gatggaaatt ctttataatt atccagggga gtttactggg
     1501 aaacaaatcg aatttaccgg ttttgtttat aatgatgaag tcacccaaga taataacttg
     1561 tttttgttcc gttttggaat aattcactgt gttgccgatt ctggtgtgtt tggaatgctt
     1621 gttcaaatgc ccgaaaaaac cgatttgaaa aacgatacat ggcttacagt aaaaggaacc
     1681 atcacccaag aatattattc tccgttcaaa atgaacatcc cgtctgtaca agtagaaagc
     1741 tataaagaag tagcaaaacc aaaatcagtt tatgtttatc gtaaatatta aatcgctact
     1801 tgcggattta tgcagcttgc gttatcctta aataaagctg tttacgtttt cacgaatgaa
     1861 ttaaaggatg gaacattgaa tgaatgatta caaccactac tttcatttcc cacgagaaga
     1921 atggcgcaag ctggaagtga gtaaggacca aattttaact gcagaggaac tggaagaaat
     1981 acgtggttta aatgaccgaa tttctttaca agacatctct gaaatctatt taccactaat
     2041 aaaactaatt gcgattcaat accatgaagc gatttttatt catggcgaaa aaatggaata
     2101 cttaaagaaa aaagaatcgc gtgcaccatt tattattgca ttagcaggaa gtgtggctgt
     2161 tgggaaaagt acgacagcgc gtgttttcaa attaatgctt gatcgctggt tctccaaaac
     2221 cagacaagta gagcttgtga cgacagacgg ctttctttat cctaacaaag ttttagaaga
     2281 gcgcggtatc atggacaaaa aaggcttccc tgaaagctac gaccgcgacc gttttgccaa
     2341 gtttttaacc gacttaaaag caaataaaga agatgtcgaa attccacttt attcgcattt
     2401 cacttatgat gttttagacg aaacccgtgt gatccataat ccagatatcg tcatcattga
     2461 aggaatcaat gttcttcaag cagatcaaca tgagagcctg tttccaagtg acttctttga
     2521 tttctccgtt tacatggatg ccaatgaagc ggatattaag aaatggtatt tagaacgttt
     2581 cttcatgctt cgcgaaacag ctttccaaga tgaaagttct tatttccacc catatactaa
     2641 aattagcaaa caagaagcag aaacatttgc actcggggtt tgggatacaa tcaacggcgt
     2701 caacttaaaa gaaaacattg agaaaacaaa atatcgagcc gacttagtgc ttcaaaaagg
     2761 cacagatcat ctcatttcag acatttattt acgcaaataa ccgaatgcag atagaaggaa
     2821 acttcttgat gcattcggtt ttttctttac attggagaaa atccgagtac aatagaaagt
     2881 gagtaatcac tcatttgaaa aagggaggga aagcaatgtc agaaatagcg attaaagttt
     2941 ctaatttaga tgtgaaaatt ggaaagaaac aaatcttaac caatatgact ctcgaaatag
     3001 aaaagggcga gatatttggc ttaatagggc catccggtgc aggaaaaaca acactcgtga
     3061 aaaccatcat cggaatggaa aaggcaacga atggcacaac tgaggtttta ggaaaagcaa
     3121 tgccaaattt accagtcatt agcaaaattg gttacatggc ccaatcagac gcactttata
     3181 cggatttaac agccaaagaa aacttggatt ttttcgcttc actatattcc atcaaaggtg
     3241 cagccaaaaa agaccgaatg aattatgcag ccactttagt taatttacaa caagatttaa
     3301 ctaaaaaggt gaacaattat tcaggaggga tgaaacgcag gctgtctctg gccatttctg
     3361 tccttgctga cccagatgtc ctaattttag atgagccaac agtcggtatt gatccagaac
     3421 taagaaaaac gatttgggca gagctaggcg atctaaaagc gaacggtaaa tgtatccttg
     3481 tgacgacaca cgtgatggat gaagccgaaa aatgtgatag acttgccatg atcagaaatg
     3541 ggcaaataat cgctgtaggg accccacaag agctctcaag taaaacgtca tctggtaagc
     3601 tagaagatgc ctttttagag tttggaggga agcactaatg cgaatatttg ccattgtcaa
     3661 acgcatcatt aaccaatttc gccgtgataa acggacgctt gccctaatgt ttcttgcgcc
     3721 acttttactt atcacactgc tcacttattt attcgaaggt gacacagtga agccagttgt
     3781 tggtgtaagc gggctttctg actccatggt aaaagaactg aaagcaaatg atttaaccat
     3841 caaaacttac tcggaaaata ccgatgtaac cgctaaaatt aaagatgcca acctcgacgc
     3901 tttttttaaa caaaacggtg aaaaactcga agtcacctat gaaaatagtg aaccaagctt
     3961 gagtaaggaa atcggattaa aactacaaaa agcaatgatg acggagcaac aggcacaagt
     4021 gaaaaagcaa gcgaaagcaa ccggtgagtc acttgctaaa gctggtattg atccaaacac
     4081 cattccttca cttacacaaa gcccagaaaa gctcagcatc tcaacaaact acgtatacgg
     4141 agataaaggt actacctttt tcgacacaat cagcccgatt ttcattggct ttttcgtatt
     4201 ctttttcgta tttctgattg ccggtatttc tttcttgaga gaacgaacaa caggcacgct
     4261 tgaaagactt atggcaaccc caattaaacg tatcgaactt gaattagggt atttaatagg
     4321 ttttggtatt ttcgcgttac tacagtctat cttagtcgca gttttctcca tccaagtact
     4381 tggcatgatg caaaacggct ccttattcta tgtgttactt attacattaa cactcggcat
     4441 ggtttctcta gcgctaggaa ttttactttc tactttcgca aataatgaat ttcaaatcgt
     4501 tcaatttatt cctatcgtta ttgtgccaca agtcttattt tgtgggattt tcccgctcga
     4561 tggcatggca gattggctcg tgtggattgc ccatattatg ccgctttact acggcgcaaa
     4621 tgcactaaca tccattatgg taaaaggaga aggattcgct tcgtttgcaa ctgatttcta
     4681 cattttacta ggatttgtgc tcgtatttgt tatattaaat atttttgctt tgaaaaaata
     4741 ccgcaaagtt taaatgaaac aggaggagat aagacgtgga tgcagaagga gacattatcc
     4801 gtcaaatgct tgatttaacg gaaaaagaaa caaagatgag tgaaaagcag cgccgaattg
     4861 tcgctgcttc catcgaactg tttgcagaaa aaggctatgc cggaacttca acgaatgaaa
     4921 ttgctaaaaa agctggggtc gcagaaggca ccatttttag acactataaa acgaaaaaag
     4981 atttactaat ggcgattacc atgccaacgc ttatcggtgg tgtgatacca tttttggcac
     5041 aaagctttgt caaagaagtg tttgaaagtg agtatccaga ttttcagtca ttcattcggg
     5101 aaatcatcgt taatcgcttt gattttgcca aagagaatgg taaggtcatc aaaatttact
     5161 ttatggaact gttttatcac gatgagttaa gaatacagtt ttcagaaatt tttatgacac
     5221 atgtcaaagg gcaatttgat caaatgattg attattataa agagcgcggg gaaattgttg
     5281 atatgccgaa cagcacgatt atgcgcgctc ttatcacgaa tattgtcgga tttatgctaa
     5341 caaggtttgt cgtgatgccc gacgtggagt gggatgatgc caaagaaatt gatgatacgg
     5401 tggcgtatat tatgagaggt ttaggtaagt aaaaaagagt ccagatattc tggactcttt
     5461 ttctcattta tcggatgaat cagttgattt tttcttattg taattgtatt tacttggatc
     5521 cacttttttg aaaccatcag gagcatagaa acgtaacaag tcaccttgta gtacagaatc
     5581 tgaaagctct aattcttttg ctactttttc ttttgtttct ttcatttctt ttgtttccgt
     5641 agcaattggt tccccagttt gttgattata catgttacca ccaatcattg aataggtagg
     5701 agttatataa tcaccatttc ggaatggaac aagttgttta tggtctttag aaagtaaatc
     5761 tgtaccaaat tgtaagtact ctttattatc aacaccaagt aagtgaagta atgtcggaag
     5821 taagtcaact tgaccaccgt attgttcttg aacgccacct tgaacaccag gaacgtgaat
     5881 cattaaagga acacgctgcg cttgggcatt ttcaaaagtg ttgtaatctt taccaagaat
     5941 ttttgtcatt gcttcttcat ggttgtcgga aataccataa tggtcaccgt acatgataat
     6001 gacagagtta tcgtaaagac cagatttctt caagtaatca acaaagctct tcacagattc
     6061 gtctaaataa cgagctgttt ggaaatacgt atctacagat gaatcgcctg ttgttgccgg
     6121 agcaatcgaa gcatctttct catcaattgg ataagggaag tggttcgtaa gcgtaataaa
     6181 tttcgtgtag aacggttgtt gtaatgacga tagatattct tcggattcct taaagaatgg
     6241 tttatcttta agtccgtagt tagaaacatc tgcttcgttc atatcgtagt aactagcatc
     6301 aaagaaatta tcgtaaccaa attgtttata aatttcatca cgattccaga agctcttata
     6361 gttaccgtgg aatacagcac ttgtatagcc ttgttggcct aaaatagcag atgcagattc
     6421 ataagtgttt tgccctttag ttgtaaaggc agaaccttga ggcaagccgt aaagcgagtt
     6481 ctcaagtaac atttcggagt cagctgtttt accttgacct gtttggtgga agaagtttgt
     6541 aaagcttagt gtattttggt ctttaaagaa agagttaata aacggcgtta cttcttctcc
     6601 atttaatttg taatttacta ggaattgttg gaaactctct aaatggatat aaatgacgtt
     6661 tttgcctttt gctttaccaa aatattccgg atttggcgcg gcatatttgg atttggtata
     6721 gtttaagact tctgtaacat cactactatc agcaagtgca cgctgtgtgg atgattcggt
     6781 acttttcact gcgtcataga tttgatagtt agtcatacca agatatttaa caatataatt
     6841 tctatcaaac gttcttgtta gaagttgtgg acgatcaatt tctgcaagtc ccaagtttcc
     6901 aaagaacatt gcgataccaa gcgtcagaac cccaactact tttcttgcac gaatacgggc
     6961 tgttttgttt ggttttacaa agcggaaagc aagtagtgca attaaaatga taatatccgc
     7021 gaagtaaata atatcgtgcc agctgagtaa cgctgtgata ctacttccca tgtcgcccat
     7081 gttttgcatt tgttttgcgt ttagattcgg aagtgtaatg aaatcactaa agaatcgata
     7141 atatacaata tttgcgtaaa gaataaaact cattaaaaag tcaatgacga taatccaaat
     7201 gaatgaacga cgtcccttag caaagagcgc aagacccata aagaaaatgg ccccacttaa
     7261 tggattaatg aacagcaaaa tttgctgcat cagattttct atgccaagtt taaattcaag
     7321 ttgatatgca atatacgttt ttagccaata aagaatgacg gctagaacaa aaaatccata
     7381 attcttgctt aaaaacgttt ggatttttat tttccaatcc ttcatgaaac acctctccta
     7441 cacactattt actcgtttta attgttattt tgaaatgaaa aaaagaagct gtattatgta
     7501 acaagaaaca ttttcataca gcacccactt taacataatt ctaacacaag attaataaaa
     7561 ggcaagttat aacctatacg tctgaagtag gattttaggg gaaataggct gatataacta
     7621 gtcaaaaaag aaccatttgg aatagaattc tgctagaata aaaagaaaac attgaggtat
     7681 gaaatggaag cgattattac gaaagaattt tttgaagata agacaacaat cgaattagcg
     7741 agagatatct tgggtatgcg tctagtacat caaacggatg agggaattct atctgggcta
     7801 atagtggaaa cagaagcgta cctcggggca acagatatgg ctgcacatag ttttcaaaac
     7861 ctccgaacga aacgaacaga agtcatgttt tcatcgccgg gaagaatcta catgtaccaa
     7921 atgcatcgcc aagtgttgct taattttata accatgccaa aaggaatccc agaagccatt
     7981 ctaatacgag ccatcgaacc tgacgaacaa gctaaacaac aaatggtaca aaatcgtcac
     8041 ggaaaaactg gttacgaact taccaatggc cccggaaaat taacgcaagc tttaggatta
     8101 agtatgcaag attacgggaa aactcttttt gatagtaaca tttggttaga agaggcaaaa
     8161 ttgccgcatt taatagaagc aactaatcga ataggggtgc caaacaaagg aattgcaact
     8221 cattttccac tcagatttac tgttaaaggc agcccatata tttcagctca acgaaaaagt
     8281 cggattctta ccgatatttg gaagtgactt tacaattttg tcacaggtag agaaaatagt
     8341 tttatccaga cactgatttt ctttgcttca taagaagagc tactatataa tgaaatagtt
     8401 acaaggagga attatatgtt aaagaaaaca attgcaataa ttattttaat cattgggcta
     8461 ctattaattt tttccccatt catcaaaaac ggcattgtga aatacatgag tggtcatgaa
     8521 acaatcgagc aatataaagc atcagatata aagaaaaata atgaaaaaga cgctacattt
     8581 gattttgaaa gtgttcagct accctctatg acatctgtta ttaaaggagc agcaaattac
     8641 gacaaagatg cagtcgttgg ttctatcgca gttccatctg tagacgttaa cctcttagtt
     8701 ttcaaaggaa caaatacagc taatttactg gcgggtgcaa caaccatgcg ttctgatcaa
     8761 gtcatgggta agggtaacta tccgctggca ggtcaccata tgcgtgatga atctatgttg
     8821 tttggtccta taatgaaagt caaaaaaggc gacaagattt atctaacaga tcttgagaat
     8881 ttatacgaat acactgttac ggaaacaaaa acgattgatg aaacagaagt aagtgtgatt
     8941 gacgatacga aagacgctag aattacactt attacatgtg ataaaccaac tgaaacaaca
     9001 aaacggtttg tcgcggttgg tgaactagaa aaaacggaaa agctaacaaa agaactagag
     9061 aataaatatt tccctagtaa ataatgagaa aagacagcgg attttctaag ctgtcttttt
     9121 ttctggataa tttctccttt tattataaat gttgtatcat ataaaggagg tttattttga
     9181 gaaaggaagt gcagtgatga aactaaccgt ttttggacat tggggtggct atccattagc
     9241 aaatgaaggc acatctagtt atttgctgga agaagctgga tttaagctat taattgatgt
     9301 tggcgcaagt gctgtttcta ttatgcaaaa ctatattgat cctgatgata ttgatgcggc
     9361 aataatttct cattaccatc cagaccatgt agcagatgta gggattttgc agcacattcg
     9421 cctattatca caaaaaaagg aaaaaccgcc agtattgccg atatatggac ataaagaaga
     9481 tgaacgcggt tattcttatt tagaaatggc aaatgtaaca aaagcaatcg aatataaacc
     9541 agatgataga cttgaaatcg gaccgtttaa agtaactttc ttaaagacga tccatccggt
     9601 accttgctat gctatgagaa tagaagcagg tgacaaagtt ttcgtataca ccgcagatag
     9661 cgcttatcaa gatagtttta tccctttttc agagggggca gatttattag taacagacac
     9721 caattttttc catgacctag ccggaaaaac aaaagtgcat atggctagca cggaagttgc
     9781 aaaaattgcc aaagaagcca atgtgaaatc attactcctc agtcatttac ccgaagttgg
     9841 cgatttagaa gttctaaaac aagaagcagc ggctatttac aaaggagaaa ttgcacttgc
     9901 ttcaaaagga ttcacgaaaa cattttaata tagaagaaaa ggggtaggag tatgtacttt
     9961 atagataata ataatgagaa agatcctcgt attaatttag cggtggagga atttatttta
    10021 actgaattaa atctagatga gcctgtgctg ttattttata ttaataagcc atcgattatc
    10081 attggacgca accaaaatac agtagaagaa attgatacag agtatgtgga gaaaaatgat
    10141 gtcatcgtag tgcgcagact ttctggcggc ggcgctgttt atcatgatga aggaaactta
    10201 aatttcagtt ttatcacgga agatgatggc gagtctttcc ataattttgc gaaattcacg
    10261 caaccaatcg tggaagcgct gaaacgttta ggcgtcaatg cggaactaaa agggcgtaac
    10321 gacttattga ttgatggttt aaaagtttct ggaaatgcgc aatttgcaac gaaagggaaa
    10381 atgttctcac acgggacatt aatgtatgat ttgaacctag ataatgttgc tgcatcgcta
    10441 aaaccacgta aagataaaat cgaatcaaaa ggaattaagt ctgttcgtag tcgtgtagcg
    10501 aatatttctg atttcatgga tcaagaaatg acaacggaag agtttcgcga tttgctatta
    10561 ctttatattt tcaatgttga aaaagtagaa gacgtaaaag aatataaatt aactgctgca
    10621 gattgggaaa aaatccacga aatctctgct aaacgttatg gtaattggga ctggaactac
    10681 ggaaaatctc caaaattcga tttaacacga acaaaacgtt ttccagtagg agcagtcgat
    10741 gttcgcttaa atgtacaaaa agggattatt acagatatca agattttcgg agacttcttc
    10801 ggcgtaaaaa atgtggcgga tattgaggag aaattagtca atacaactta taagcgcgaa
    10861 gcattggacg aggctttagc agatatagac gtaaaagaat actttggtaa cattacgaaa
    10921 gatgaatttt tagatttact ttattaaaaa aatggaaagt acgcatcccg cgtgctttcc
    10981 atttttttat ttgagatttt ttcctgacat ccaatgttcc agccgttttc caacaaacca
    11041 taaaataacg acagaaacag ctaatatagc cagtttgagc ggctggtgaa tcaagtcgac
    11101 aaagtcatag ccaatatagc taatggcgaa gactttgatt agtttgccac ctacaagcgc
    11161 taatataaat tgatatactt ttattttaga gagacctgca acaatattta ccgccgaaga
    11221 tggggtaaat ggcattacaa gtaaaatgaa aatcggacta aaaccatgtc tatcaatcca
    11281 ttccattact cgtttaattt gtttatggcc cgaaataaaa cgtaaaaaac gagtttgacc
    11341 aaatttccgt gctaacaaaa atacgcacaa actaccagca attgctgctg tcaccgaaat
    11401 taaaaaacca ccaagtagtc cgtatgcatt tacgttcact acaacgaaaa ctataaatgg
    11461 taaaaatggt aaaaacgctt caataaaagg taagagaaaa gctaaaagtg gacctaaatt
    11521 ccgatactca cttagccagt acattaaatt atcataagaa aagaaattca tcatatcctg
    11581 ccaaaatgtc ataagcaagc ctccagtagt ctttaacaac atacttattt tctcacatca
    11641 aaatgataaa gcgctaataa aacagcttga atatagttaa aatcctagta ttttaaccag
    11701 gattttaaca tttcttcttt attttaattg atatagtgtt cctgtaccag tgccattcat
    11761 tccttgagcg ccaccttgca tattaaaaga agcgctagaa gtggtgtcat catccgtaga
    11821 accggagcta ctccacttcg aactatcaat ttctgtaccg ttttcttgaa tccattttac
    11881 cacatctgag tcagaagctt tactatttga tgggagatag aaatatttta tttcaccggc
    11941 ttgaatcatt tgttttaatt gttttacagt tagagttgga tctgttccat tgaaaccacc
    12001 aagtgccata acagcttctt tcgttttaat aatataagga cctgctgttg ttgcatctgt
    12061 tgtcccaaat aagtaggttt ctccggtatt gtttttctgt aaatagctaa ttaaatcact
    12121 atcaacagat gcatcggcga atccaccacc actagattgt tttaattgtg gtccagcttc
    12181 gggtaaggaa ctattcccac catataaaat aggtgttaaa gaccaatatg ttggagcaat
    12241 gagcaaaatc gctaaagcga gcgctgttat tttcgcggtg agtttggaag gttgtggtct
    12301 aagtacaatt aagataatag acgtaattag tgcagcaata ccaataacta ccgctaaaac
    12361 aggcaagtaa gcagcaacaa agaatgcttg tagacctcca gttagcgtaa ctgcagcagg
    12421 tagcaggaac ctttgccaat tctctttgtc ttggtataac cgaaagagcg ccactagacc
    12481 tacgccacta agtaaagcaa ttggcggagc tagcataatc aaataataat gatggaaaaa
    12541 gccagcgata ctaaagaatc cggcgacagg gataagccaa gctgcccaga aaactatttc
    12601 cttttgtctg gaggtcaatt gataaattcg tttattttca tttcgataca ccaggaaaat
    12661 ggctagcata ccgataatag caagtggtaa gaaccaacta atttgatcac caagtgcggt
    12721 ttggaataga cgaagtggtc cagcgttccc tgttccaaac atgcctgtgc taccagtcat
    12781 ttttgatcca ttcccgccgc cgtttgccgc attactggga gctccagttg gaggagcgcc
    12841 attatttcct tgaggaggag ttccgccgtt agcaccgtcc tgcatacttc cacttggagg
    12901 agtcggtggg gttgcgttac ttgaatctgt tgagttagtg ctaggaggag tccccatttc
    12961 cacattacca ttactacctg ttccagtttc ttgaccaaga agccgttcca taccattata
    13021 gccaaatgcc aactcaagca ccgaattggt ttgactacta ccgatataag gtcgctctga
    13081 agcagctgtt tgatcaacta cgactgccca agaaacagag acacctagca ttaagacaag
    13141 tgcgattact aattgaacta gcttttttct ccaacttagt tttgtagcaa taaaatagaa
    13201 gagcaaaaat gcgggcacga ccatgaaagc ttggagcatt tttacattaa aaccgacacc
    13261 aatcaacgca aaagaaagta aaagccagcc gatttttgca cgatgaacag ctttaaaaag
    13321 gaaaaaggtt gctagtaata acacaaatac aagaatagca tccatattat tagtacgcgt
    13381 cacggctacc gcaataggag tcagcgccat aatcaaagca gtaattcttg cagcccatgc
    13441 gccaaatcta ggtttgacga gcacataaag caaaatcacc gaaccaacac cagccaacgc
    13501 ttgtggtaag ataacactcc aaccatgtat gccgaaaata agggcactga tcgcttgcaa
    13561 ccaaagtgca acaggtggct tatctaccgt aataaaacca gcaggatcaa aagctccgta
    13621 gaaaaaatta tgaatatttt gcaccatact tgtcacagca gctgtataat aaggatttac
    13681 cgtatcatca ttccaaatac cataaaaatt aaaaaagatg gcaataacaa taattccaac
    13741 aaaataaaaa tctaaatgtt gtatccgttt cttcatattc ttca
//
LOCUS       DASDYO010000086        13340 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.086, whole genome shotgun sequence.
ACCESSION   DASDYO010000086 DASDYO010000000
VERSION     DASDYO010000086.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13340
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.086"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            120..833
                     /locus_tag="U0290_002042"
     CDS             120..833
                     /locus_tag="U0290_002042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WxL domain-containing protein"
                     /protein_id="HEM2302081.1"
                     /translation="MIIKKTLIVGLIGISSVTLFAPAAFAVTSEGDSKATVKFKAGTG
                     VVNPVDPENPTKPIDPLDPSNPTDPGTGNTGSLTLDYVSSVNFGEHEVSSTEQSYSST
                     SRKPFIQISDRRGTGAGWKVTATATAFQNEDGAASLSGATLSFKNGETASASNTATTP
                     TAAQTVELPTDGTSIVSVVSAKESEGMGTWINRWFGATPNDTASLNNNVQLTIPAGSA
                     TLGDHEATITWTLSDAPGV"
     gene            901..1926
                     /locus_tag="U0290_002043"
     CDS             901..1926
                     /locus_tag="U0290_002043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF916 and DUF3324 domain-containing protein"
                     /protein_id="HEM2302082.1"
                     /translation="MKKSFLSLLFIIPLLVTCSNFAEAQAAEGDVGYSVQAHIPANQI
                     DKRQTYFDLKMQPKQKQTVNIDVMNSSNEEIQVEAAINYASTNRTGVIDYTKNDLTKK
                     DKSLEYPLPELAKIPDDQKLLTIPVDGKKTVQVMIEMPAESIDGVVLGAVEFKKKNTN
                     ETKKTKGVSLKNEYSYIVGMQLAETDKQVKPHMNLLSIKPALLNYHTAIVAKLQNDQP
                     VILENLSIDAKVYQQNSDKLLYQTKKANMKMAPNSNFDFGIDLENQPLKEGKYRLKMT
                     ATNGVETWTWDEAFTIGKEGQNLNKEAVNLEKTNTWLYVAIVAGVVLIALIIILVIRK
                     RRQKQEK"
     gene            1944..4409
                     /locus_tag="U0290_002044"
     CDS             1944..4409
                     /locus_tag="U0290_002044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302083.1"
                     /translation="MAFKKLILVLTIAALFLGFKIVVAAENGSRDLASNEAIVTNFTE
                     LKTAISEDNGIDTVYLGADVELSGGIIIPATKKTFTLSGKNPATGEIHTLTETMASAG
                     AQSSVITVNTNTGAKETTLRDINVVGKNYYGTISVYGAAKNVVQNYENVHYQGPQMIY
                     NLNGTANFKGTNDITIASVVSGSAAPNEVAEIKGVSVSGKLNINHASSNANSAFWFGG
                     GTAEVNTFTVEENAEVTILSNGTGMFYRSGTKPIDIDVKKNAKLAITSNNNIFRDTPG
                     GAVKIASGADVTMTKTAGGNPLLWVADDITVSPDARFILNKTGGTGYIIQFYNATAKL
                     DINDPRSFLITTNSNTPMFYWPYANTFNLNAQMVNYWDTVGTIDRTDLAAQSFSLPNG
                     ENVTGSLTYTGTTTKILSTNAGMTPTNFNQNTARMIAMGRLEGTINPVTDADNEITGT
                     ATPNAFISISYTENGENKVLEGQANEAGTYRIAIPNGFIKPYIKLTTTIKQDQKRITL
                     DDITVEDVTPPSGEAVTQIIQLGDPFPDVAELVTNIYDHSDNTSGAGVTTTLQSAPDT
                     NVFGPTEAIVRLEDKAQNYVDIRVPVFIKDDETEIQDGKALRAADFSVNVKDIIELND
                     AELEQFILSKSGAKAFNIETGEDLSAELKVASTNLKKETGTYAATIQIDGLTKEIAIQ
                     VTGELKFNHVPETISFETMELNQQKNIAKRNADFDLSVLDSRGSGGKFSVTATVKTPL
                     TSTINSAHTLPNGLIFIDNTGAKKILSAEPITIFESQSASEMIVPIEWAEDQGILVEV
                     DAAEAYVDESYETTIEWTLTDAP"
     gene            4521..5924
                     /locus_tag="U0290_002045"
     CDS             4521..5924
                     /locus_tag="U0290_002045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxyribodipyrimidine photo-lyase"
                     /protein_id="HEM2302084.1"
                     /translation="MTSVMWFRRDLRVNDNKALYHACKEDDLLLLFQVNPAQFITGSP
                     SHQAFFASVAHFKQEIDKTAHLQIMFGEPIECFQQLKDSLPSWDKVYFNRDETGYGAK
                     RDEAAQAFFDEQKIEVQAFHDSYLHSAEEVKKSPTEYYKIFTPYYKKWREEIKETPFK
                     VTLKHENIRKESLFLKYEEQFAEMTSDLPILDIGERAANTRLANFIKHDVADYDKARD
                     FPELDKTSHLSRYLRTGEISIRTIWQTLQETEATEGRATFEKELCWRDFYNMIYVSFP
                     NQKNEPIQENYRFIEWENNREYFKAWQEGKTGFPLVDAAMRQLKETGWMHNRLRMITA
                     SFLTKDLLIDWRFGEKYFQQMLIDYDPASNIGGWQWAASTGTDAVPYFRIFNPTTQSQ
                     KFDSTGKFIRKYVKELANLPDKYIHQPEKMSETEQKEHGLLLGKDYPFPIVDHKERRK
                     LAIARYEFSKEHSRGNI"
     gene            6062..6475
                     /locus_tag="U0290_002046"
     CDS             6062..6475
                     /locus_tag="U0290_002046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2177 family protein"
                     /protein_id="HEM2302085.1"
                     /translation="MAQFLKLFLTSAVVFLIFDLFWLLVASKKMYQQFIGDLMGDVKL
                     APAVIFYFIYVVGVTFFVLLPGTEKGSLGYTILAGALFGLVCYATYDLTNLATLKDWP
                     ITMTIIDLVWGTAVTTVTSVIVYFINLHFFSGAGS"
     gene            6478..8244
                     /locus_tag="U0290_002047"
     CDS             6478..8244
                     /locus_tag="U0290_002047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family EDD domain-containing protein"
                     /protein_id="HEM2302086.1"
                     /translation="MESESKRLLQSMLNGAAEVISKKDELNRINVFPVADGDTGSNLA
                     SLMQAIIDHVSPREYSTKELLEEVASAALIGARGNSGMIFAQYLNAVAESYHHLESTF
                     DGLVQAFQNAVHKAYEALLDPKEGTILSVMKAWSEELAGTYEQERSFQQSLLNAQIVA
                     EKALINTEFQMPILRKNRLVDSGAKGFYYFITGLTNAYCGKAVSDPVRFTEVEQTAEH
                     RHVETSEPKYRYCSEFIIKQATISHQHLQEILAAKGDSLVIAGNEKQIKIHIHTNEPK
                     EVLSLMAAYGVMTYQKVDDMRLQYEVTKKPRAKIAIVTDSIADLPEAFLLEHQVHVLP
                     MNILAGEENFLDKLTVGPNMMQEKLRKQTKMSTAQPTIRTVDALLSFLEHKYEHVLVI
                     SVAAKLSGTYQLIKQRIKARELSSDWIRVIDSKLNSVAQGILVKQAVELVESGKSWES
                     IYPEVEQMIERTFIYVAVADLSPMVQSGRIPRVLGKLAQKLSLYPIVSLDESGDGKLI
                     GVSFSQKQSMKKIIKKIAKLQLKELAITHVSSRDTAAIWQKQLEKETGEISYLVDSSA
                     AIAISAGLGSVAVAGIKKEETI"
     gene            8244..9014
                     /locus_tag="U0290_002048"
     CDS             8244..9014
                     /locus_tag="U0290_002048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464119.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1295 domain-containing protein"
                     /protein_id="HEM2302087.1"
                     /translation="MYWTVTLALLVYFILWFIISKIKGKYSLVDIAWGGGFVVVAWTG
                     FLTTFSMTAQSITILVLVTIWGVRLFWHLARRNWNKPEDYRYVNMRKRWGTTLVNLKA
                     FLNVFVLQGVLLFIIALPITHSFANETATFAWWQILGIVIWIIGFIFEVGGDLQLENF
                     KKNPANKGKLLTTGFWSVTRHPNYFGEALSWWGVFLVAYTQLNDLWLITSPIVITLLL
                     LFVSGVPLLEKKYQDRADFQAYANKTSKFFPFIGKKGL"
     gene            9142..9684
                     /locus_tag="U0290_002049"
     CDS             9142..9684
                     /locus_tag="U0290_002049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464120.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1269 domain-containing protein"
                     /protein_id="HEM2302088.1"
                     /translation="MKKEKTVLIMNFDEESISYQAFSEMKRLHQERKIIGYQMAVVKH
                     EPGNKLVAQDFLDFTGADKNMKDSLIGMLIGILGGPFGILIGWMVGAIVGSMRDAGEV
                     KDALNVFERTLKTIPEGSTGVILIATEQELANVNDVAMDELHGRVQRMDEAIVAQEIK
                     SAQETEGKAKDSAKKHWFSK"
     gene            9911..10711
                     /locus_tag="U0290_002050"
     CDS             9911..10711
                     /locus_tag="U0290_002050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464121.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HEM2302089.1"
                     /translation="MDVESSPLMQKIDYSTRKKIDLVNNSILRYIVRAMLACLFLTLG
                     TAVAVMIGDKVDHFAPGLGKITYAFMFSWSLVMIIYMNAELGTSNMMYMTTGVYQKIV
                     KPGKALQILLLCIVCNLLGGILAGYLVSLTSVFHNLPADHFLFTAVSGKLEKAPLQIF
                     VEGIFANIVVNTAVLCTLRMKDDAGKVIAMIFIIFIFAFLGFEHVIANFSSFSLAFFA
                     SGGTLAAMTAGNVTVNLVLALLGNFVGGGLVIGLGYAWLNRTKSIYKD"
     gene            complement(10749..11855)
                     /gene="metX"
                     /locus_tag="U0290_002051"
     CDS             complement(10749..11855)
                     /gene="metX"
                     /locus_tag="U0290_002051"
                     /EC_number="2.3.1.31"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464122.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="homoserine O-acetyltransferase"
                     /protein_id="HEM2302090.1"
                     /translation="MTLQQKELFQKSPLLLENGETLSPVLVGYETYGTLSASRDNCIL
                     LEHALTGTAHAAKHFESDAPGWWDDYIGPGKTIDTDKYFLVCTNVFGGCSGTTGPSSI
                     NPKTGEPFRLQFPGFSIKDIIKVQRELLEQLGVTRIVSVIGGSMGGMQATEWAIDYAD
                     ITDSIINIASPLAAGPDAIGYNLIMRMAILNDPDFNGGNYVGQPEGGLATARMVGMMT
                     YRTSELFSKRFERFTVAESSPAAFSKEHFQIESYLQYQGDTFVERFDANSYLYLTKAI
                     DLFDVTAPAKDDLPAFAKIKIPYLLIGITTDQLFRIHDLRRGYELLKEWDVPVTYHEV
                     ASEYGHDAFLVEKEVPKFEPLIRSFLSNLPVKSI"
     gene            complement(11872..13149)
                     /locus_tag="U0290_002052"
     CDS             complement(11872..13149)
                     /locus_tag="U0290_002052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464123.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-acetylhomoserine
                     aminocarboxypropyltransferase/cysteine synthase"
                     /protein_id="HEM2302091.1"
                     /translation="MSNEYKFETIQVHGGHTPDGDTHSRAVPIYQTTSYTFDSPEHAA
                     ALFGLQETGNIYTRIMNPTTAVLEERLTLLEGGIGAVATASGMAAITYSILNIAGSGD
                     HIVAAATLYGGTHTLFSHTFKTFGIDVTFVDPNEPENFEKAIKDNTKAVFIETIGNPD
                     INIVDIEKVAEIAHASDIPLIVDNTFATAYLNRPFDFGADIVVYSATKFIGGHGVAIG
                     GAVIDSGKFNWANGKFPKLVVPDDSYNGLSYTNDVGAAAYITKLRVSLLRDTGAALSP
                     FNAFLLILGLETLSLRLEQHVKNAKQVANFLNDHPKVAWVNYPGLSDNKYHELAQKYL
                     PKGPGSIFTFGVKGGYEAGKKVIESVELFSHLANVGDAKSLIIHPASTTHQQLSEEQQ
                     LTAGVKPESIRLSIGIENADDIIQDLTKALEQI"
     regulatory      complement(13258..>13340)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
BASE COUNT         4317 a         2381 c         2858 g         3784 t
ORIGIN      
        1 atattacgaa aatagattta taatataatt tttttctctt ttttaataaa ttgtacattg
       61 aattgacgca tttttcatca taatatgaag ccagtgtatg aggaaagggg aaacaaaaat
      121 tgattatcaa aaaaacatta attgtaggat taattggcat aagttcagtc acactttttg
      181 caccggctgc ttttgcagta acttctgagg gagattcaaa agcaacagtt aaatttaaag
      241 ctgggacggg agtagttaac ccggttgacc cggaaaatcc aacgaaaccg attgacccgc
      301 tagatccaag taatccaact gatcctggaa ctggaaatac tggttcttta acattggatt
      361 atgtgtcatc tgttaatttt ggagaacatg aagtatcatc cacggaacaa agctactcct
      421 ccacatcaag aaaaccgttt atccaaatat ctgaccgtcg tggaactgga gctggttgga
      481 aagtgacagc aaccgcaacc gcttttcaaa atgaagacgg tgcagcttcc ctatcaggag
      541 cgacactatc atttaaaaac ggagaaacag catctgctag caacacagca acgacaccaa
      601 ctgctgctca aacagttgaa ttaccaacag atggaacttc gattgtgagt gttgtttcgg
      661 caaaagaatc ggaaggcatg ggaacatgga ttaatcgttg gtttggtgct acaccgaatg
      721 atacagctag tttaaacaac aatgttcaat taacgatacc agcaggaagc gcaacacttg
      781 gagaccatga agcgactatt acatggacat tatctgacgc gccaggagtt taaaaaattt
      841 gcgtttagaa ttcacttcta gacgcaaatt tttattaaaa acgatggaag gaaggtttaa
      901 ttgaagaaaa gttttcttag tttattgttc attattccgt tattagttac atgtagcaat
      961 tttgcagaag cacaggcggc agaaggagac gtcggttatt ccgttcaagc tcatatcccc
     1021 gccaatcaaa tagataaaag acaaacttat tttgacctaa aaatgcagcc gaaacaaaaa
     1081 caaacagtaa acattgatgt aatgaatagt tcaaatgaag aaattcaagt ggaagcagca
     1141 atcaactacg catccaccaa tcgaactggt gtcattgatt acaccaaaaa tgatcttacg
     1201 aaaaaagata aaagtttaga atatccactt ccagaactag ctaaaattcc agacgaccaa
     1261 aaactcctaa cgataccagt agatggcaaa aagaccgtcc aagtgatgat tgaaatgcct
     1321 gctgaatcga ttgatggcgt tgtattgggc gcagtagaat ttaaaaagaa aaatactaac
     1381 gagacgaaaa aaacaaaagg tgtctcctta aaaaatgaat attcctatat tgtcggcatg
     1441 caactagctg aaaccgacaa acaagtcaaa ccacatatga atttactaag tatcaaaccg
     1501 gcactcctta actatcacac agcgatagtt gccaaattac agaacgacca accagtcata
     1561 ctggaaaatc taagtattga tgcaaaagtc tatcaacaaa attcggataa attactttac
     1621 caaacaaaga aagcgaatat gaaaatggcg ccaaattcca attttgattt tgggattgac
     1681 ttggaaaatc aacctttaaa agaaggtaaa tacagattaa aaatgactgc aacgaatggc
     1741 gtggaaacct ggacttggga cgaagcgttc accattggta aagaaggaca aaacttaaat
     1801 aaagaagcag taaacctaga gaaaacgaac acatggcttt acgttgcgat tgttgcaggt
     1861 gtggttctta tagcactaat catcattttg gttataagaa aacgaagaca aaaacaagaa
     1921 aaataaagaa aggagctggc gaattggctt tcaaaaaatt aatacttgta ttgaccattg
     1981 cggctctttt tcttggtttt aaaatagtgg tagcagcgga aaatgggagt agggacttag
     2041 catcaaatga agcgatagtg actaatttta cagaattaaa aacagctatt tccgaagata
     2101 atggaataga tacagtgtat ttaggtgcag atgttgaatt atcgggtgga attatcatcc
     2161 cagcgacgaa aaagacattt actttatcag gaaaaaatcc agcaacaggt gaaatacata
     2221 ctttgacaga aacaatggca tcagctggtg cccagagcag cgtgattaca gttaatacca
     2281 acacaggtgc aaaagagaca actttaagag atattaatgt tgtggggaaa aattattatg
     2341 ggacgatttc ggtttatggg gctgcaaaaa acgtcgtaca aaactatgaa aatgttcact
     2401 atcaaggtcc gcaaatgata tataatttga atggaacggc gaattttaaa ggaaccaatg
     2461 atataacaat agcgtccgtt gtatctggtt ctgcggcacc aaatgaagtc gcggaaatta
     2521 aaggcgtgag cgtttccggt aagttgaata tcaatcacgc aagttcgaat gcgaatagtg
     2581 ctttttggtt cggtggtgga acggctgagg taaacacttt tacagtggaa gaaaatgcag
     2641 aggtgacgat actttctaat gggactggga tgttttatcg ttcagggaca aaaccaattg
     2701 atatagatgt gaaaaagaat gcgaagttag ctattacttc taacaataat attttccgag
     2761 acacgccggg cggagctgtt aaaatcgcgt caggtgcgga tgtaactatg acaaaaactg
     2821 ctggcgggaa tccacttcta tgggtggcag atgatattac cgtaagtcct gatgcccgct
     2881 ttatcttgaa taaaacaggc ggaactggct atattatcca gttttataat gcgacggcga
     2941 agttagatat aaatgatcct cggagctttt taattacgac aaattcaaat acgccgatgt
     3001 tttactggcc ttatgcgaac acctttaatt taaatgcgca aatggtgaat tactgggata
     3061 cggttggaac cattgatcga acggatttgg cagcgcaaag ttttagttta ccaaatgggg
     3121 aaaatgtgac ggggagtttg acgtacactg ggacaacgac aaaaattctg tcaacgaatg
     3181 cggggatgac gccgactaat tttaatcaaa acaccgcgcg aatgattgca atggggcgac
     3241 ttgaaggaac gataaatcct gtgacagacg cagataatga aattacagga acagcgacac
     3301 caaacgcttt tataagtatt tcatacacag aaaatgggga aaataaggtt ttagaaggac
     3361 aggcaaatga ggcgggaact tatcgaattg ctattccaaa cggttttatc aagccttaca
     3421 ttaaattgac tacaaccatt aaacaagacc aaaaaaggat aacattagac gatataactg
     3481 tagaagatgt gactccgcca agtggtgagg ctgttactca aattatccaa cttggagatc
     3541 cctttccaga tgtagccgaa ttagtaacaa atatttatga tcattccgat aatacatctg
     3601 gagcgggagt tacaactact ttacaaagcg cgcccgatac taatgtattt ggacccacag
     3661 aagccattgt tcgcttagaa gataaggcac aaaattacgt ggatatccgt gtacccgttt
     3721 ttattaaaga tgatgaaaca gagatacaag atggcaaagc attacgagcg gcggactttt
     3781 cggtaaatgt aaaagatatt atcgagctca atgatgccga actggagcaa ttcattttaa
     3841 gcaaatcggg tgcaaaagct ttcaatatcg aaactggtga ggacttaagc gcggagttga
     3901 aagtagctag caccaatttg aaaaaagaga caggcaccta tgcggcaacg atacaaattg
     3961 acggattaac gaaagagatt gcgattcagg ttacgggtga gcttaaattt aatcatgtgc
     4021 cagaaacgat ttccttcgaa acaatggagc ttaatcaaca aaaaaatatc gcaaaacgaa
     4081 acgctgactt tgatttatct gtgcttgatt caagaggctc aggcggcaaa tttagcgtaa
     4141 cagcaaccgt taaaacaccg ctgacatcca cgataaattc ggcgcatact ttgccaaatg
     4201 ggctcatttt tattgataat actggagcga aaaaaattct ttccgctgaa ccaatcacca
     4261 tttttgaatc gcagtcagct agtgagatga ttgttccgat agaatgggca gaagaccaag
     4321 ggattttggt agaagttgat gcagcggagg cttatgtgga tgaaagctat gaaacaacaa
     4381 tcgagtggac tttgacggat gctccgtaaa aacctgttag caaaagttaa caggtttttt
     4441 catgttataa gcccattgtt ttctaaatac actagtttct cgtataatag cgttaagtaa
     4501 tttgcgaaag gtggaagaaa atgacttcgg taatgtggtt tcggagagat cttcgagtaa
     4561 acgataataa agctctctat catgcttgta aagaggacga tttgcttttg ttatttcaag
     4621 taaatccagc acagttcatc acaggaagtc ctagccacca agcttttttt gcaagtgtgg
     4681 ctcattttaa gcaagaaatc gataaaactg cgcatttaca aatcatgttt ggtgaaccga
     4741 tagaatgctt ccaacaactt aaagattcgc taccaagctg ggataaagtt tatttcaacc
     4801 gtgatgaaac aggatacgga gcaaagcggg atgaggcggc gcaagcgttc tttgacgaac
     4861 aaaaaatcga ggttcaagcc ttccacgata gctatcttca ttcagcggaa gaagtaaaga
     4921 aatctccaac agaatactat aaaattttta ccccttatta taaaaaatgg cgcgaagaaa
     4981 taaaagaaac gccgttcaaa gtgactttaa agcatgagaa tatccggaaa gaaagcttgt
     5041 ttctgaaata tgaagaacaa tttgcggaaa tgactagcga tttaccgata ttagatattg
     5101 gtgaacgagc agcgaacacg agacttgcga attttattaa acacgatgtt gctgactatg
     5161 acaaagcgag agatttcccg gaactggata aaacaagcca tttatcacgt tatttacgaa
     5221 cgggggaaat ctcgattcgg acgatttggc agacacttca agaaacagaa gcaacagaag
     5281 gacgagctac atttgaaaaa gaactttgtt ggcgcgactt ttataatatg atttacgttt
     5341 cttttcctaa ccaaaaaaac gagccgatcc aagaaaatta tcgttttatt gaatgggaaa
     5401 ataaccgtga atatttcaaa gcgtggcaag aagggaagac tggtttcccg ctcgttgatg
     5461 cggcgatgcg ccagttgaaa gaaactggtt ggatgcataa tcgactaaga atgattacgg
     5521 cgtccttttt aacaaaagat ttgctgattg attggcgttt tggcgaaaag tattttcaac
     5581 aaatgctgat tgattatgat cctgcgagta atattggtgg ctggcaatgg gcggcttcga
     5641 ctggaacgga tgcggtgcca tactttagga ttttcaaccc aacgacacaa tcacaaaaat
     5701 ttgattcgac tgggaaattt attcgaaaat atgtaaaaga gttagcgaat ctacctgata
     5761 aatatattca tcaaccagaa aaaatgtcag aaactgagca gaaagagcat ggcttgctgt
     5821 taggaaaaga ctatccattt ccgatagttg accataaaga acgacggaaa ttagccattg
     5881 cacgctacga gtttagcaaa gagcattcta ggggaaatat atagataatg agtcaatcat
     5941 ttaattaaat gattgatttt tttgtggcag tattcacaaa gaataagtct tgagcaacct
     6001 tctaggagta agaacctggg tatgttaaaa ttcatttatc aagtgataag ggggaatcac
     6061 aatggcgcaa tttttaaagc tatttctaac gagtgcagta gttttcttga tttttgatct
     6121 tttttggtta ctcgtagctt ctaaaaaaat gtatcaacaa tttattgggg atttaatggg
     6181 ggatgtaaaa cttgctccag cagttatttt ttactttatt tatgtcgttg gtgttacctt
     6241 cttcgtttta cttcctggga cagaaaaagg aagtttaggt tacaccattt tagcaggcgc
     6301 gttgtttggt ctagtttgtt atgcgacgta tgatttgacg aacttggcga cacttaaaga
     6361 ttggccgatt acgatgacca ttattgatct cgtttgggga acggctgtga caactgtgac
     6421 ttcagtgatt gtttacttta ttaatctgca tttcttctcg ggagcaggtt cctaatgatg
     6481 gagtcagaaa gcaaacgtct attacaaagt atgctaaacg gggcggctga agtaattagt
     6541 aaaaaagacg agcttaatcg aataaatgtt tttcctgtag cggatggcga cacgggtagt
     6601 aatttagctt ctttaatgca agcgatcatt gatcatgttt ccccgagaga atattcaacg
     6661 aaggaattgc tagaggaagt agctagcgcg gcgctcatcg gtgctcgtgg caattcaggg
     6721 atgatttttg cgcaatactt aaatgctgtt gcggaaagtt atcaccacct tgaatcgact
     6781 tttgatggat tagttcaagc gtttcaaaat gcggtgcata aagcttatga agccttgttg
     6841 gatccaaaag aagggactat tttgtctgtg atgaaggctt ggtcagagga gcttgctggg
     6901 acgtatgagc aggagcgttc tttccagcaa tcgcttttaa atgcacaaat agttgcggag
     6961 aaagcattaa ttaataccga atttcaaatg ccaattttac ggaaaaaccg gttggtggat
     7021 tctggtgcga aagggtttta ttactttatc accgggctta caaatgctta ttgtggtaag
     7081 gcggtttctg accccgttcg ttttacggaa gtagagcaaa cagcggaaca taggcatgtt
     7141 gaaacaagcg agccgaaata tcgttattgc tcggaattta ttatcaaaca agcgactatt
     7201 tcacatcaac atttacagga aattctcgca gctaaagggg attccttagt aattgcaggt
     7261 aatgagaaac aaataaaaat ccatatccac acaaatgaac caaaagaagt tttaagcctc
     7321 atggcagcat acggcgtgat gacgtatcaa aaagtagatg atatgcgtct gcaatatgaa
     7381 gtcacaaaaa agcctcgcgc aaagattgct atagtgaccg attcgatagc cgatttacca
     7441 gaagcatttt tactggaaca ccaagtacat gtattaccga tgaatatttt agctggagaa
     7501 gagaattttc ttgataaatt gacggttggc ccaaacatga tgcaagaaaa attaagaaaa
     7561 caaacgaaaa tgagtacagc ccagccaaca atccgtacgg tggatgcctt gttatctttt
     7621 ttagaacaca aatatgaaca tgtgcttgtt atctccgttg cggcgaaatt aagcggaact
     7681 tatcaattaa tcaaacagcg gataaaagcg cgggagttgt cctcggactg gatacgtgta
     7741 attgattcta aattaaattc ggtcgcgcaa ggaattttag tgaaacaagc agtagaacta
     7801 gtggaatcag gtaaatcatg ggaatctatt tatcccgaag tggaacaaat gattgagcgg
     7861 acctttattt atgtggcggt tgcagatttg tcgccgatgg tccagtctgg cagaattcca
     7921 cgagtgttag gaaagcttgc gcagaaatta tcactctatc cgattgtgag tttggacgag
     7981 tccggggatg gcaaattgat aggcgtatcg tttagccaaa agcaaagtat gaaaaaaatc
     8041 attaaaaaaa tagcaaaatt acagctgaaa gagctggcga ttacacatgt ttcttcaaga
     8101 gacaccgcgg caatttggca gaagcaactt gaaaaagaaa cgggggaaat cagctactta
     8161 gtggatagtt cggcagccat tgcgattagt gctggactcg gaagtgtcgc agttgcgggg
     8221 attaaaaagg aggaaacgat atgatgtatt ggacagtaac actcgcttta cttgtttact
     8281 ttatactctg gtttattatt tcaaaaataa aaggaaaata ttcgctcgtt gatattgcgt
     8341 ggggcggcgg cttcgttgtt gtagcatgga ctggattttt aacgacattt agcatgacag
     8401 cgcaaagtat aaccatactt gttttagtga cgatttgggg tgtccgtttg ttttggcatt
     8461 tagcgcgccg gaattggaac aaaccagaag attatcgcta cgttaatatg cgcaaacgct
     8521 ggggaacgac attagttaat ttgaaagcct tcttaaatgt cttcgtgttg caaggtgttt
     8581 tattatttat tattgcttta ccgattacac atagttttgc taatgaaaca gcgacattcg
     8641 cttggtggca aatcctcggt attgttatct ggattattgg ctttattttt gaagtcggtg
     8701 gcgatttgca attagaaaac ttcaagaaaa atccagccaa taaaggcaaa ttattaacaa
     8761 ctggattttg gtcagtcaca cggcatccaa attattttgg tgaagcactt agttggtggg
     8821 gtgtattttt agttgcctat acgcaattaa atgatctctg gctgattact agcccgattg
     8881 ttatcacttt attattacta tttgtttccg gtgttccgtt acttgaaaaa aaatatcaag
     8941 acagagcgga ttttcaagca tatgcgaaca aaacgtcaaa atttttccct tttattggta
     9001 aaaaaggtct gtaaaaagta gttattttat cttgacattg ctattaattg ctatttacat
     9061 gagagagcga gtaaaatgaa agataggtac gataaatagt atctgaatat aatactttat
     9121 gaggcgagag gggtacaaca gatgaaaaaa gaaaaaacag tgttaattat gaatttcgat
     9181 gaagaaagca tttcttacca agctttttct gaaatgaaaa gattacacca agaacgcaaa
     9241 atcattggtt atcaaatggc ggttgtaaaa catgagccag gaaataaact tgttgcacaa
     9301 gattttcttg attttactgg tgccgataaa aatatgaaag atagccttat tggtatgtta
     9361 attggtattt taggcggtcc atttggtatt ttaattggtt ggatggtcgg cgcaatcgtt
     9421 ggttccatgc gagatgctgg cgaagtgaaa gatgctttaa atgtatttga aagaacatta
     9481 aaaacaattc cagaaggttc tacaggtgtc atccttattg cgacagaaca agaattagca
     9541 aatgtaaacg acgtagcaat ggatgagtta cacgggcgtg tgcaacgtat ggatgaagct
     9601 atcgtagctc aagaaatcaa aagcgcacaa gaaacagaag gaaaagcaaa agattctgct
     9661 aaaaaacatt ggtttagtaa ataaaaatat ttcaaacgag gacagagaaa tctgttctcg
     9721 ttttttgtgt tttaagagtg tgaaaacggg gaaattaaca acataaaaca cccagataga
     9781 aaaaaattca agatggtaac gcttaactca tttttatttt ctgaaaacta tttgcatcaa
     9841 attaaaaaca tgctacaata aacaagttgt gaatttcaca agaaaatttt ttgtttggag
     9901 atgaaataat ttggatgtgg aaagtagtcc attaatgcag aaaattgatt atagtacgcg
     9961 caaaaaaatt gatttagtaa ataatagtat tcttcgttat atcgtgcgcg cgatgttagc
    10021 atgtttattc ttgacactag ggactgcggt cgctgtaatg attggtgata aagttgatca
    10081 tttcgctcca ggacttggta aaatcacgta tgcatttatg tttagttggt cgctcgttat
    10141 gattatttat atgaatgctg agcttggtac ttctaacatg atgtatatga caactggtgt
    10201 ttatcaaaaa attgttaaac caggaaaagc attacaaatt ttgcttttat gtattgtttg
    10261 taatttattg ggtggaattc ttgccgggta cttagtttcc ctaacatccg ttttccataa
    10321 tttacctgct gaccatttct tatttactgc tgttagcggt aagcttgaaa aagcgccact
    10381 acaaattttt gtagaaggta ttttcgccaa tattgttgta aatacggccg tgctttgtac
    10441 acttcgaatg aaagatgatg ctggtaaagt cattgcgatg attttcatta ttttcatctt
    10501 tgcattctta ggatttgagc acgttatcgc caacttctcc tctttctcat tagcattttt
    10561 cgcttctggt ggaacacttg ctgcaatgac agcgggcaat gtgaccgtca atttagtact
    10621 tgctttactt gggaattttg taggtggagg ccttgttatc ggactcggct atgcttggct
    10681 taaccgaacg aaatcaattt ataaagacta attaaaggag accccggaaa ttttccgagg
    10741 tctctttttt atatactttt aacaggtaaa ttacttaaaa atgaccgaat gagcggttcg
    10801 aatttcggca cttctttttc aactagaaaa gcgtcatgac cgtattcgga ggccacttca
    10861 tgataagtaa ccggcacatc ccattctttt aaaagctcgt aaccgcggcg caaatcatga
    10921 attcggaaaa gttgatctgt cgtgatgcca atgagcaaat acggaatttt aattttcgca
    10981 aaggcaggca aatcgtcttt cgcgggagca gtaacatcga ataaatcaat tgcctttgtt
    11041 aaatataagt agctattcgc gtcaaatcgc tcgacaaaag tatccccttg atattgcaaa
    11101 tacgattcaa tttgaaaatg ctcttttgag aaagcggcag gagaagactc ggcgacagtg
    11161 aaacgttcaa agcgtttcga gaaaagttcg ctcgtccggt aagtcatcat cccaaccatt
    11221 cgcgcagtag caagtccgcc ctcaggttga ccaacatagt tgcccccatt aaagtcaggg
    11281 tcgttcaaaa ttgccatgcg cataatcaag ttgtaaccaa tcgcatcagg tccagcagcg
    11341 agcggggagg cgatattgat aatgctatcc gtgatatcgg cataatcaat cgcccattcc
    11401 gtcgcctgca taccacccat cgatccgcca atcactgaaa caattcgcgt aaccccaagt
    11461 tgctccaaaa gttcacgctg cactttaata atatctttaa tcgaaaaacc tggaaactgt
    11521 aagcggaaag gctcgccagt ttttggatta atcgaagaag gtccagtcgt gccactacaa
    11581 ccaccaaata cattggtgca aaccagaaaa tatttgtctg tatcaatcgt tttccccgga
    11641 ccaatataat catcccacca accaggagcg tcactctcaa aatgtttcgc cgcatgtgcc
    11701 gtcccagtaa gggcgtgttc taataaaatg caattatcgc gtgaggcgga aagtgtcccg
    11761 tatgtttcat agccgactaa aacagggctt aatgtttctc cattttcaag tagaagagga
    11821 cttttttgaa atagttcttt ttgttgtaag gtcacttctc ttcacttcct cctaaatttg
    11881 ctctaatgct ttcgttaaat cttggataat atcatcggca ttttcgattc cgatagatag
    11941 gcgaatggac tctggtttca cgccagctgt taattgttgt tcttcgctta gttgttgatg
    12001 ggtcgtggaa gctggatgga tgataagcga ttttgcgtcg ccaacattcg ctaaatgcga
    12061 gaataattcc acggattcaa tcactttttt accagcctcg tagccacctt taactccaaa
    12121 tgtgaaaatg gagccaggtc cttttggtaa atatttttgg gctaattcgt ggtatttgtt
    12181 gtcgctcaaa cctggataat tcacccaagc tacttttgga tggtcattta agaaattggc
    12241 aacttgtttc gcatttttca cgtgttgctc aaggcgtaag gatagtgttt ctaggcctaa
    12301 aatgagtaag aaggcgttga acggagaaag tgctgcgcca gtatcacgaa ggagtgagac
    12361 gcgtagtttg gtaatataag ccgccgcgcc aacgtcattt gtataagaca aaccattgta
    12421 gctatcatct ggtaccacta gctttggaaa tttgccattt gcccagttaa atttacctga
    12481 gtcaataacc gcaccaccaa ttgcaacccc gtgaccacca atgaattttg ttgccgagta
    12541 aacgacgata tctgcgccaa aatcaaacgg gcgattcaaa taagcggtcg cgaatgtgtt
    12601 gtcaacgatg agcgggatat cggatgcgtg cgcaatttct gctacttttt cgatatcgac
    12661 aatattaata tcaggattcc caattgtttc tataaaaaca gctttcgtat tatctttaat
    12721 cgctttttca aaattttcag gttcattagg gtcaacaaac gttacgtcaa tcccaaaagt
    12781 tttaaacgta tgggaaaata gcgtgtgcgt tccgccatag agtgttgcgg ctgcgacgat
    12841 atgatctccg gaacccgcaa tatttaaaat agagtaagta atagcagcca tcccagaagc
    12901 cgttgcaacc gcaccaatac cgccttcaag tagcgttaac cgttcttcta aaacagctgt
    12961 agtcggattc ataattcgtg tataaatatt tccagtttct tgtaaaccaa ataaggctgc
    13021 ggcatgttcc gggctatcaa atgtgtatga cgtcgtttga taaattggta cggctctaga
    13081 atgcgtatct ccgtccgggg tgtgtccgcc gtgtacttga attgtttcga atttatactc
    13141 attactcata aaatccactc ctctttaata tgtatttatc agtaatttcc atcaaaaaac
    13201 ctccctagca gtatataagc cgccagagag gatagagttt cctaaacttg gatttccgac
    13261 ttatctttca gaatatactg ctggaattag caccgtgaaa ataaattccg gttgctaagg
    13321 cttcaaaggg ccagtccctc
//
LOCUS       DASDYO010000087        13250 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.087, whole genome shotgun sequence.
ACCESSION   DASDYO010000087 DASDYO010000000
VERSION     DASDYO010000087.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13250
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.087"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            352..777
                     /locus_tag="U0290_002053"
     CDS             352..777
                     /locus_tag="U0290_002053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465754.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphatase family protein"
                     /protein_id="HEM2302092.1"
                     /translation="MTQKLIYFLSQTHIRSAIAEAWAKRLSLSNVKFISGSWHKSKST
                     PFIAEALNEFAIEPPESLSYSPSSELLADADLIVTIYDSAHETAPKFPANIQEKIIYW
                     DIDDPEQEIALPKKWASYQEVCDNIALSVKNLEHVLIEA"
     gene            841..1710
                     /locus_tag="U0290_002054"
     CDS             841..1710
                     /locus_tag="U0290_002054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cation transporter"
                     /protein_id="HEM2302093.1"
                     /translation="MDGYNDLKKAEKAAFLSIFAYLFLAVLKIVAGQLGNSDALLADG
                     LNNTTDIVASVALLIGLRISRIPPDADHSYGHRRTETISSLIASIIMFLVGVQVIWSS
                     IVHIIEKEFATPSMLTAVVALFSGVFMYAIYLYNHRLAKKLDSQAVRAAAYDNRSDAF
                     VSLGAFIGIIGAVLGVPWLDSVTAFLVGILIVYTAIKIFYDAAHTLTDGFDVSKLETI
                     HDLIASVPDVKKVIDIKARMNGNKIWIDATIAVDPELNVVKSHAITEIVEQKIRNEYE
                     GAFTLVHIEPFFE"
     gene            1966..3270
                     /locus_tag="U0290_002055"
     CDS             1966..3270
                     /locus_tag="U0290_002055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEM2302094.1"
                     /translation="MILTIKFLIIALLIAISAFFVATEFAIVKMRPSRLDQLIAEKDK
                     RAVLARHIYNHLNAYLSACQLGITISSLGLGWLGESTVEAALHPLFSLMELPQSAITI
                     LSFTIAFLFITFLHVVVGELVPKTLAIDKTEAVALAVARPLHIFYKVMFPFIWILNGS
                     AVFIARLFGLEPASEHEIAHTEDELKIIVGESYKSGEINQSEFRYVNKIFDFDERMAK
                     EVMIPRTEIVTVDTGSTIGELSDIMQNERYTRYPVIDGDKDHVIGVLNLKEILSAYVE
                     HGSNPSFSIDPYVKPIIRVIETIPIKELLFRMQRERSHIAILLDEYGGTSGLVTVEDI
                     VEEIVGDIRDEFDADEIPEIRKIKDGHFIVDAKLLIDEVNNILGTEIEEEEVDTIGGW
                     FLTQNYEVEVGDEIDYDGFIFRVKQGEPHHIEYIEIIKKTND"
     gene            complement(3311..4189)
                     /locus_tag="U0290_002056"
     CDS             complement(3311..4189)
                     /locus_tag="U0290_002056"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2302095.1"
                     /translation="MNLHHLRYFVTLAHMEHYTKAAEKLLITQPSLSHAISSLEQELG
                     IPLFEKEGRNIGLSKAGKVFLDYVEESLDMIDAGVATTKKAANGEGQIDLAFLQTLGT
                     SLIPKLVQEFLQTEPEKQIDFIFHTGVSIDIIQGLKEKKFDIGICSKLENERNIHFTP
                     IAKQELVLIVPKSHPLAEKDWIDLIETVDYPHIAFSKKSGLRPIIDDLFRKIGADYQI
                     AYEIEVDQVIAGMVAQNFGIAVVPNMPILNYVDVKVLPIRSPNWERFFYLAVAKNQTL
                     TPAAEKFKQFMLAHRI"
     gene            4490..5344
                     /locus_tag="U0290_002057"
     CDS             4490..5344
                     /locus_tag="U0290_002057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEM2302096.1"
                     /translation="MTNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLR
                     AENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQWGTAEDRTAEQQKKEQTTFHMA
                     RLFGVKHINCGLLEKIPEEQIIVALGELCDRAEELIIGLEFMPYSGVADLQAAWRVAE
                     ACGRDNAQLICDTWHWARANQTAESIKNVPADRIVSIQLCDVHETPYKELREESLHDR
                     LAPGEGYGDTVGFAKILKEHGVNPRVMGVEVISDSMVATGLEYAALKVYNATKKVLDE
                     AWPEISPR"
     gene            5413..7338
                     /locus_tag="U0290_002058"
     CDS             5413..7338
                     /locus_tag="U0290_002058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEM2302097.1"
                     /translation="MKFNSMFSPIDIGPMKVPNRFVVSPMCNNYANTDGTLSDTSLAY
                     YKERALGGFGLITFEATVVDVRAKGGANKACLYSDHQIASFKRVIDVCHDAGAKISVQ
                     LQHAGPEGNSKVSGYPLRAASAIASAAGRNTPEAISREELYELIELYGEAALRAKKAG
                     ADAVEVHCAHGYLVSSFLSARTNKRVDEFGGCFENRMRLPRLIIESIRKRVGHSIAIL
                     CRINSTDGVEGGLSVQDSATVAAYLEDCGLDGLHVSRSVHIRDEYMWAPTVLHAGFSS
                     DLVTQIKRAVSIPVITVGRFTEPHYAELMVREGRADLVAFGRQSLADPETPNKAAAGK
                     LDELLPCIACLQGCVANMYAGKPITCLVNPLLGRESEAYSPKTPSKKVVVIGGGVGGL
                     YAGWMAGSRGHDVTVYEASDMIGGQMRLAAYPPGKGDLTNMVRSYIKKCEQFDVEIKT
                     NTPVTPELIQEVAPDAVIIATGATPLVLPIPGIEDAGLIHAVDLLDGKEKCGQKVLVV
                     GGGMVGSETAAFLGEAGHDVTVVELRDEVGADVISEHRKFLMRDFDEYKIKSVTNAKV
                     TSFFEDGVTYSLADNKEHRIDGFDSVVLAMGSRAYNPLEEAIKKMVPETYVIGDAIRA
                     RRALDATKEALDAVLQL"
     gene            7397..8266
                     /gene="aroE"
                     /locus_tag="U0290_002059"
     CDS             7397..8266
                     /gene="aroE"
                     /locus_tag="U0290_002059"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEM2302098.1"
                     /translation="MENRISGTTRLLGLIGTPVDHSKSPIMYNYSFQKAGLDYAYLAF
                     DTPIEKVADTIKAIKTFNLRGANVTMPCKSEVLKHMDDLSPAARMIGAVNTIVNEDGK
                     LTGHITDGLGFIANLRDASVDVTGKKMTIIGAGGAATAIQVQCALDGAKEITIFNIKD
                     AFYDKAKQTAASIKQEVPNCIVHIYDLNDTEKLTAEIATSDILVNATLVGMHPNEHET
                     PISDTSVFRKELIVADIIYNPKKTQLLLDAEAAGCKTVGGLGMLLWQGAEAYKLFTGK
                     DMPVSEVKNLYFN"
     gene            8299..9507
                     /locus_tag="U0290_002060"
     CDS             8299..9507
                     /locus_tag="U0290_002060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465761.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2302099.1"
                     /translation="MNAKRFYPTAIALYFTYFIHGIGVSILGQYKQDFAGVWGADKLS
                     DGTFDVSMVIAVIAALGLGRLLTLPISGPFSDKFGRKPSALIGVALYAVYFIGLAFAP
                     NMYIAYAFAFVGGAANSFLDTAVTPSVLEIFTKNGAIANMFTKFSISIGQFVLPFAIG
                     MVAAANMSFRTLFVITMVLIVIDGLIIAFMPFPPMNNNVGGEKAKPEKMKFNATSWAI
                     IGIGFTCTSTFQLWLNCNQELGKLYGMADPSKIQSFYSLGTMCAILITAVLVKKFILP
                     VRILILYPAIATLMLLIIYIVQTPTICLIGGFVIGYAAAGGVLQLAVSTANEFFPTNK
                     GKITSIVMISSSLANYIVLNVASYITKAGGIEGPKYVLLFNVAITVIGILLAIFVNMR
                     YKNESKIATK"
     gene            9667..10857
                     /locus_tag="U0290_002061"
     CDS             9667..10857
                     /locus_tag="U0290_002061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2302100.1"
                     /translation="MKNKYLSTSLGLYMNYFVHGMALIIIAQNIDFLSQKWHTDLAGA
                     AGVVSSFGIGKLLAVFISGRLSDKFGRKLSVILGVFFYIIFLGGILLSPNTIIAYMFG
                     ISAGIANSFLDTGTYPALMEAYPKKAASANIIVKAFVQSGQFLLPFMIAFILANNLWY
                     GWSFIVLIVILLINLLYTLTRTFPPMTVGKPLDAAELAEEKKQKFHFSIDEICLILFG
                     FVAQTLLYIMSQWIAKYGSEVIHMTDDASRLLVSYASVGAIICVCVTFILGNRGVRTL
                     HILITYVTMTMLISFTLFAFPSEIVCIVGAFLLGYFSAGGIIQLGLTLLAEVSARGKG
                     FVTSLYTIAEGIAVFIIPLIAAAISRIDIAAIFLLNAGIALFGLALLMIVFTRKKKFA
                     RDHI"
     gene            complement(10896..11960)
                     /locus_tag="U0290_002062"
     CDS             complement(10896..11960)
                     /locus_tag="U0290_002062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465763.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302101.1"
                     /translation="MSAGLLWKEWRQNAWVFIFILIAFIGSEATTATNAVSMFNDNYN
                     YYQSEEFQKNNTADQQMTGNEIKNDLSLTPYDFEGNLGLFFYVFLFLGLKLTVFEKNK
                     QMDYFTFGLPYSKKQIFWHKMLIPLLLIFVLVPIIIFCRFWYIYQQIPGLYLPSVSDS
                     LMYISSFLLLYLFSYTLAVAVGNLVGEIITAGIIAIGSIVSFLYMFPGALTNLIIGFK
                     AFFTGKTIVDIDGGAVMLYNAIPTPILQGTTALSEFVILIILSIGMLTISWYAMKTAS
                     LENDGRFLMNNKFRVPILIIGSLYVTICLSGHYASFNYDQLIPTGQVISLIIKIILIL
                     VASVIAFWMLMYKWKTLRKH"
     gene            complement(11957..12835)
                     /locus_tag="U0290_002063"
     CDS             complement(11957..12835)
                     /locus_tag="U0290_002063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003739595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302102.1"
                     /translation="MKVDSLSKKIDGELLLDKITFEVKPGEIIGIVGRNGVGKTTLFR
                     TIMGFYIPDEGDVYLDEALSKNPQLKQKLFMLQDSLNCWDGYKIPTIKKFYQKTYPLF
                     DGAKFDNLLNQVNLATDVKFQNYSKGMKGLFGLVLALSIGAEFILLDEPMEGLDIIAQ
                     KKIMGILLEEVEKRKLGIIISSHRLADLDPIADYIHILQDNHIEESYHLESLREQAVK
                     IQIAFENKKIPPFLLENGKVINKYGRVYTILFRDMNTELYAAIKKEKPIFMDELAVTL
                     EDLFIYHLEELGGEKS"
     gene            complement(12825..13220)
                     /locus_tag="U0290_002064"
     CDS             complement(12825..13220)
                     /locus_tag="U0290_002064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465765.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302103.1"
                     /translation="MFTINTKSQLPIYEQIVQKIKEQVVKGILQEGEKILSIREFASR
                     IGVNPNTVSKAYQELERQEVIVTVKGKGTFIANQQDKVSSPKKLAETKIKLKETILDL
                     VYLGINVEEIHRLSDEYSQDIIGGDMVEG"
BASE COUNT         4011 a         2444 c         2542 g         4253 t
ORIGIN      
        1 ttaattagtt gctgtttgaa tttgtccatg taactctcct atcttctaca cggtattaaa
       61 taaactatac acacagttat acacgtattt tacgttaaaa agcaacttta cgccaccaac
      121 tttagaccga tttttgtaat aattttgtaa taatccatat ttcctacata tttattaacc
      181 tcttttttac aatttcttca ttttaatgtt tctagtaatt taaaaagggt agatattact
      241 gttaccatta cttgtgtctt tggtaataat tatcacctat atactgtgta caacaagtaa
      301 tggcagcaag ttttacatgg gtacattaat acgccggaaa ggaattggaa tatgacgcaa
      361 aagctgatct actttttatc acaaacgcat attcgaagtg ccattgctga agcttgggcg
      421 aaaagacttt cacttagcaa tgtcaaattc attagcggtt cttggcataa atctaaatca
      481 acaccgttta ttgcagaagc gttgaatgag tttgcaatcg agccacctga aagtttgtct
      541 tattccccta gctcagaact actggcagat gctgatctca ttgtaacaat ttatgattct
      601 gcacatgaaa ctgcaccaaa atttccagct aacatacaag aaaaaattat ttattgggac
      661 attgatgatc cggaacaaga aatagcgtta ccaaaaaaat gggcgagtta tcaagaagta
      721 tgtgataaca ttgccttatc agtaaaaaat ttagagcatg tattgataga ggcttagatt
      781 tcgttgtccc gccattcgta ggcgggactt ttatgttaaa aagaaaggag tacatacata
      841 atggatggat acaacgattt aaaaaaggct gaaaaagcgg catttttgag tatatttgcc
      901 tatttatttc tagcggtttt aaaaatagtt gctgggcaat taggaaactc tgatgcctta
      961 cttgcagatg gtttgaataa tacgactgat attgttgctt ctgttgcgct tttaattggc
     1021 cttagaattt ctcgtattcc acctgatgca gatcattcat acggacaccg acggactgaa
     1081 actattagct ctttaatcgc atctatcatt atgtttctcg ttggcgtgca agttatttgg
     1141 agttcaattg ttcatattat cgaaaaagaa tttgcaacac cctcgatgtt aactgctgtt
     1201 gtcgcgcttt tttctggtgt atttatgtat gctatttact tatataatca tcgacttgcg
     1261 aaaaaacttg atagccaagc tgtgcgagct gctgcatatg ataatcgttc cgacgcattt
     1321 gttagtttag gtgcgtttat cgggattatt ggggctgttc ttggtgttcc ttggcttgat
     1381 tccgtgacgg cctttttggt cggtattttg attgtttata ctgctatcaa aattttctat
     1441 gatgctgcac ataccttgac agatggtttc gatgtttcta agctcgaaac tattcatgat
     1501 ttaattgctt ctgtacctga tgtcaaaaaa gtaattgata ttaaagcgcg aatgaatgga
     1561 aataagattt ggatcgatgc aactatcgct gtggatcctg aactaaatgt agttaaaagt
     1621 catgcaatca ccgaaatcgt tgaacaaaaa attcgtaacg aatacgaagg tgcgttcact
     1681 ttagttcata ttgaaccatt ttttgaataa tattcattgt caataatcgt aaagtcaact
     1741 ataatttaga ttaaagtatc atttgctggg agggaatatt cgatggggca gagaaactaa
     1801 ttcacataaa ttatctaact agaatgaaaa ataggcaaca acacattgga ggagttctct
     1861 tccaggacgg tttttcttct atatagatag ttttataata tgcttattta tattaaacta
     1921 ggaggtgttt gccttagcag aaactatttc tgtcaaggcg atttattgat attaaccatt
     1981 aaatttttaa ttatagcttt acttattgct atatcagcat ttttcgtggc aacagaattt
     2041 gcgattgtta aaatgcgacc aagccgtttg gaccaattaa ttgcggagaa agataaacgc
     2101 gcagtcctcg ctagacatat ttacaatcat ttgaacgctt acttatcagc ctgccaactc
     2161 gggataacga ttagttccct tggacttggt tggttggggg aatctacggt agaagcggcg
     2221 ttacatccgt tatttagctt aatggaactt ccgcaatcag ctattacgat tctatccttc
     2281 acgattgcct ttctatttat cacattcttg cacgtagttg ttggggaact tgtaccgaaa
     2341 acactggcga ttgataaaac agaggcagtt gcacttgcgg tagctcgtcc actgcatatt
     2401 ttttataaag tgatgttccc gttcatttgg attttaaatg gttctgccgt tttcatcgca
     2461 cgtctttttg gtttagagcc agcttccgag cacgaaattg ctcataccga ggatgaatta
     2521 aaaataatcg tcggcgaaag ttataagagt ggtgaaatca accaatcaga attccgttat
     2581 gtgaataaga tttttgattt tgatgaacgt atggcgaaag aagtcatgat tccgcgaaca
     2641 gagattgtta ccgttgatac gggctctact atcggggaat tatccgacat tatgcaaaat
     2701 gaacgctata cgcgctatcc ggttattgat ggcgataaag accacgttat cggcgtactt
     2761 aatttaaaag aaattttgtc agcatatgtt gagcatggat ctaatccaag ttttagcatt
     2821 gatccttacg taaaaccaat tattcgtgtg attgaaacaa ttccgattaa agaattactt
     2881 ttccgtatgc agcgtgaacg ttcccatatc gcgattttac ttgacgaata tggtggtact
     2941 tctggacttg ttacggttga agatattgta gaggaaatcg ttggtgatat ccgcgatgaa
     3001 tttgatgccg atgaaattcc agaaattcgc aaaatcaaag acggtcactt tattgtggat
     3061 gcgaaacttc ttattgatga agtaaataat attttaggta ctgaaattga ggaagaagaa
     3121 gtcgacacaa ttggcggctg gttcttaacg caaaattatg aagtagaagt tggggacgaa
     3181 attgattacg atggattcat tttccgcgta aaacaaggcg aacctcatca tattgaatat
     3241 atcgaaatca tcaaaaaaac gaatgactaa tcaaaaagta gctatccctc tcgtaggata
     3301 gctacttttt ttatatacga tgcgctaaca taaattgctt gaacttctca gctgcgggcg
     3361 ttagcgtttg gtttttcgcg actgcgagat aaaagaatct ctcccagttt gggcttctaa
     3421 ttggtaagac tttgacatcc acataattta aaatcggcat gttcggaact acagcaatcc
     3481 caaagttttg cgcgaccatt ccggcaatga cttgatccac ttcaatttca tatgcaattt
     3541 gataatcggc accaattttt ctgaacaaat catcgataat tggacgcaaa ccactttttt
     3601 tcgagaatgc gatatgcgga taatctaccg tttcgattaa atcaatccag tctttctcag
     3661 caagaggatg gcttttgggg acgatgagca ctaattcttg tttggcaatt ggcgtaaagt
     3721 gaatatttct ttcattttca agtttagaac aaataccaat atcaaatttc ttttctttta
     3781 ggccttgaat gatatcaatc gaaacacctg tatggaaaat aaaatcgatt tgtttttctg
     3841 gttcggtttg gagaaattct tgaacaagct ttggtattag agacgtgcca agtgtttgca
     3901 agaatgccaa gtcaatctgc ccttccccat tcgccgcttt tttagtcgtc gcgacacccg
     3961 catcaatcat atctaaggac tcttccacat aatcaagaaa tactttgcca gctttactta
     4021 accctatatt ccgcccttct ttttcaaata aagggatacc taattcttgc tctaaggagg
     4081 aaattgcgtg acttaaacta ggctgtgtaa tcagcaattt ttcagctgct tttgtgtaat
     4141 gctccatgtg cgccagtgtg acgaagtatc gtaaatggtg taaattcatg cttctctcct
     4201 aactaaaaag ttatctatgc aatttatcta tcaattaata gaacaatacc aatttgtttt
     4261 tatggaatag tcataataca attagactgt agttacgcca gtgaaataaa ctattcctta
     4321 aaaaccaata tacggtagaa taggttaact gtccagttcc attttcaact attgaaggcg
     4381 ttatcacatc agaggttttt aattaagcgg aattaatttt tttactggtg tttgtgaaaa
     4441 tattatcaaa gtttcttgta atttttatta tggagaggag ataattttta tgacaaatgc
     4501 aaatggcaac ctaaaaaaat gccccatcac gattagctct tatacgcttg gaacagaggt
     4561 atcttttcct aaacgagtaa aagtcgctgc ggaaaacggt tttgacggaa ttggcttgcg
     4621 tgcagaaaac tatgtagatg cactagctgc cggattaacg gatgaagaca tgttgcggat
     4681 tttagacgag cataacatga aagtaacaga agtggagtac ataactcagt ggggaactgc
     4741 cgaagatcgt acagcagaac aacaaaagaa agagcaaaca actttccaca tggcgcgatt
     4801 atttggcgtc aaacatatta attgtggttt gcttgaaaaa atccctgagg aacaaatcat
     4861 cgtcgcgctt ggtgaattat gtgaccgcgc agaagaatta attattggtt tagaatttat
     4921 gccatatagc ggtgtagcag acttacaagc agcttggcga gtagcagaag catgcggccg
     4981 agataatgcg caacttattt gtgacacgtg gcactgggct agagcaaacc aaacagcaga
     5041 atctatcaaa aacgttcccg ctgatcggat tgtttccatc caactatgcg atgtccacga
     5101 aacgccttac aaagaacttc gtgaggaatc acttcatgat cgtctagctc ctggagaagg
     5161 ctacggagat acggtcggtt ttgcaaaaat tttaaaagaa catggtgtaa atccacgtgt
     5221 gatgggagtc gaagttattt cagactctat ggtagcaact ggtttagagt atgccgccct
     5281 taaagtatac aatgccacga aaaaagtatt agacgaagca tggccagaaa tttctccacg
     5341 ctaaacacct actcgcttat gtgaaaataa taacgtagta ggaagactcc ctgtgaaagg
     5401 aatgtgttat ttttgaaatt taattcgatg ttttcaccta ttgatatcgg gccgatgaag
     5461 gtgcctaaca gatttgtcgt atcgccaatg tgtaacaact atgcaaatac agatggaact
     5521 ttatcagata cttcccttgc ttattacaaa gaacgagcgc ttgggggttt tgggcttatt
     5581 acttttgaag caacggttgt agatgtacgc gcaaaaggtg gcgcaaataa agcatgccta
     5641 tatagtgatc atcaaattgc tagttttaaa cgagtgattg atgtatgtca cgatgctgga
     5701 gcaaaaattt ctgttcagtt acagcacgct ggaccagaag gaaattccaa agtatctggt
     5761 tatcctttaa gagcagcctc agcaatcgcc tctgctgcag ggcgtaatac tccggaagcc
     5821 atttcgcgtg aagaacttta tgagttgatt gaactttacg gagaagctgc tttacgagca
     5881 aaaaaagcgg gcgccgatgc ggttgaagtt cactgcgcac atggttatct agtaagtagt
     5941 ttcttatctg cacggacgaa caaacgtgtg gacgagtttg gtggctgttt tgaaaaccga
     6001 atgcgattac ctcggcttat tattgaaagt attcgtaaac gtgtcggtca ttccatcgca
     6061 attctttgcc gaattaatag cacggatggt gtggaaggcg gactaagtgt tcaagatagc
     6121 gcaacagttg cagcttattt agaagattgt ggtttggatg gtttgcatgt ttctcgtagc
     6181 gtccatattc gtgatgaata catgtgggcg ccaaccgtat tgcatgcagg atttagctct
     6241 gatcttgtaa cacaaatcaa acgcgctgtt tctattcctg taattactgt gggtcgtttc
     6301 acagagccgc attacgcgga attaatggtt cgtgaaggcc gcgctgactt ggttgctttc
     6361 gggcgtcagt ctttagcaga tccagaaaca ccaaacaaag ctgctgctgg aaaactagac
     6421 gaattacttc cttgcatcgc ttgtcttcaa ggttgcgttg ctaatatgta tgccggaaaa
     6481 cccattactt gtttagtaaa tccgttactt ggacgtgaat ccgaagctta ttcacctaaa
     6541 actccaagta aaaaagtagt tgtcattggc ggtggtgtcg gcgggcttta tgctggatgg
     6601 atggctggat cccgtggtca tgatgtgaca gtttatgaag catcagatat gattggtggt
     6661 caaatgcgct tagctgccta tcctcctggt aaaggcgact taacaaacat ggttcgaagt
     6721 tacatcaaaa agtgtgaaca gttcgatgtc gaaattaaaa caaacacacc tgtaacacca
     6781 gaacttattc aagaagttgc cccagatgcc gtcattattg caactggcgc cactccactt
     6841 gttttgccga taccaggtat tgaggatgct ggacttatcc acgcagttga cttacttgat
     6901 gggaaagaga aatgtggtca aaaagtgctc gtagttggcg gaggtatggt tggtagtgaa
     6961 acagctgcat ttttaggtga agctggtcat gacgtcaccg ttgtagaact tcgcgatgaa
     7021 gtcggagcag acgttatttc tgaacatcgt aaattcctga tgcgtgattt cgatgaatat
     7081 aaaatcaaaa gtgttacgaa tgcaaaagta acgagtttct ttgaagacgg ggtaacctat
     7141 tccctagcgg ataacaaaga acaccgaatc gacggatttg actctgttgt tctagcaatg
     7201 ggatcaagag cctataaccc actggaagaa gctataaaaa aaatggtacc cgaaacctat
     7261 gtcatcggtg atgctattcg tgcgcgccgg gcattggatg caacaaaaga agcactagac
     7321 gctgtattac aattataatt tatcattcta ctcgctgtaa tgtgcagcga gtaggattca
     7381 ttcggaggaa aacaaaatgg aaaatagaat ttcaggaacg actaggcttc ttggcttaat
     7441 tgggacaccc gtagaccatt caaaatctcc aatcatgtat aattacagtt ttcaaaaagc
     7501 ggggttggat tatgcttacc tagcttttga cacacctatt gaaaaagttg ctgatactat
     7561 aaaagcaatc aagacattta atctgcgtgg cgcaaacgtg accatgcctt gtaaaagtga
     7621 agttttaaaa cacatggatg acctttcccc tgctgctcgg atgattggcg ctgttaacac
     7681 tatcgtaaat gaagacggga agctaactgg gcatataaca gatggccttg gttttattgc
     7741 aaatttacga gatgctagtg tagatgtcac cggcaaaaaa atgactataa ttggtgctgg
     7801 tggtgcagct acagcaatcc aagtccagtg tgcacttgat ggggccaagg aaatcaccat
     7861 ttttaatatt aaagacgctt tttatgacaa agcaaaacaa actgctgctt ccattaaaca
     7921 agaagtgcca aattgcatcg tacatattta tgatttgaac gatacagaaa aactaactgc
     7981 ggaaattgcc actagcgata tccttgttaa tgcgacactc gttggcatgc atccgaatga
     8041 acacgaaaca cctattagcg atacatccgt ttttagaaaa gaacttatcg ttgcagatat
     8101 tatttataac cctaaaaaaa cgcaacttct actagatgct gaagctgctg gttgtaagac
     8161 tgtaggcggg ttaggaatgc ttttgtggca aggcgctgaa gcatacaaat tgtttactgg
     8221 taaagatatg ccagtttcag aagtaaagaa tctatatttc aactaataaa ttcatcagga
     8281 tttcgagagg agaaaaaaat gaacgcaaaa agattttatc caacagcaat agcactttat
     8341 tttacttatt ttattcacgg tattggggta tccattcttg gccaatacaa acaagatttc
     8401 gccggagtat ggggagcaga taagctttct gatggcacat ttgacgtaag catggttatc
     8461 gcagttatcg cagcacttgg tttaggtcgc ttgctgacat taccaatttc tggacccttc
     8521 tcagataaat ttgggcgtaa accgtccgca ttaatcggtg ttgcgttata cgcagtttat
     8581 ttcatcggtc ttgcttttgc accgaatatg tatatcgctt acgctttcgc ttttgtagga
     8641 ggagcggcga actcattctt agacacagcc gtaacaccat cagttctaga aattttcaca
     8701 aaaaatggcg ccattgccaa tatgtttact aaattctcta tctctatcgg acaatttgta
     8761 ttacctttcg caatcggtat ggttgcggcg gcaaatatgt cattccgcac actattcgtt
     8821 attacaatgg tcttaatcgt tattgatggc ttaatcatcg catttatgcc attccctcca
     8881 atgaacaata atgttggcgg cgaaaaagca aaaccagaaa aaatgaaatt caatgcaact
     8941 agttgggcta taatcggtat tggttttacg tgtacatcca ctttccaact atggctaaac
     9001 tgcaaccaag aacttggaaa attatacggt atggctgatc caagtaaaat tcaatcattc
     9061 tactcactag gaacaatgtg cgcaattcta attaccgctg ttctcgtgaa aaaatttatt
     9121 ttgccagtcc gaattctaat cctatatcca gcaattgcca ctttaatgtt gctaattatt
     9181 tatatcgtac aaacaccaac catttgctta attggtggat ttgttatcgg atacgctgct
     9241 gctgggggag ttctacaact agctgtatca actgccaatg agtttttccc aacaaacaaa
     9301 gggaaaatca cttcaattgt catgatttct tccagtctag caaactatat tgttttaaac
     9361 gttgcaagtt atattactaa agctggtggt atcgaaggtc cgaaatatgt gttattattc
     9421 aatgtagcga taactgttat tggtatccta ctagcaatct ttgtcaatat gcgttacaaa
     9481 aacgaatcta aaattgctac taaataattt attgttcaac tgagcattta tgatgctcag
     9541 ttgaacttac atatcatttg tgaagtaaag cacaaactta tgtattttat ctatatgaac
     9601 tcactgaaaa agagggtatt tttaataaaa agtcctcata agtcattaca taaaggagag
     9661 cagactatga aaaacaaata tttatctaca tcacttggtc tttatatgaa ctactttgtt
     9721 catggtatgg cgttaatcat cattgcacaa aatattgatt ttttatctca aaaatggcat
     9781 acagatttgg ctggtgctgc cggcgttgta tcttcctttg ggattggtaa attattagct
     9841 gtatttattt cgggaagact atccgataaa ttcggtagaa agttgtctgt tattctcggc
     9901 gtgtttttct atattatctt tttaggcggt atattactca gtcccaatac gattatcgca
     9961 tacatgtttg gtatttctgc tgggatagca aattccttct tagatacagg aacctacccc
    10021 gcccttatgg aagcttatcc aaaaaaagct gcttctgcta atatcattgt taaagctttc
    10081 gttcaatctg gtcaattcct tttaccattc atgattgcat ttattttagc aaataactta
    10141 tggtatggct ggagctttat tgtattgatc gttattttac taattaactt actctataca
    10201 ttaacgcgaa ctttcccgcc gatgactgtt ggaaaaccac tagatgcagc agaacttgcc
    10261 gaagagaaaa agcaaaagtt tcattttagt atagatgaaa tttgtttgat tttatttggt
    10321 tttgtggccc aaacgcttct ttatattatg agccaatgga tcgctaagta tggttcagaa
    10381 gttattcata tgacagacga tgcttctaga ctacttgtaa gttatgctag tgtcggagcg
    10441 attatttgtg tgtgtgtgac gtttatttta ggaaatcgcg gcgtgcgaac gctccatatc
    10501 ttaattactt atgtaaccat gacgatgctc atctccttta cactgtttgc tttcccaagc
    10561 gaaatcgtat gtattgttgg ggctttctta ttgggctatt tctctgctgg aggaattatc
    10621 caattaggtt taacactact tgcggaggtt tctgctcgag gaaagggttt tgtcactagc
    10681 ctttatacta ttgcagaagg gatagctgtt ttcattatcc ccttgattgc tgctgcgatt
    10741 tcccgaattg atattgccgc tatcttctta ctaaatgctg gtattgcgct tttcggcctc
    10801 gctctcttaa tgattgtatt tacaagaaag aaaaaatttg ctcgagatca tatttaaaaa
    10861 agaccgagaa ttgattcctc aattctcggt cttttttaat gtttccgtaa cgtcttccat
    10921 ttgtacatga gcatccaaaa agcaataaca gatgcaacta aaatcagtat aattttaatt
    10981 attaaactta taacttgtcc cgtcggaatt aattgatcgt aattaaaact tgcataatgg
    11041 ccacttaaac aaatagtcac ataaagagaa ccaatgataa gtatagggac ccggaattta
    11101 ttattcatta aaaatctacc atcgttttcc aaagaagctg ttttcatcgc ataccagcta
    11161 atggttaaca ttcctattga taagataatt aatatgacaa attcacttaa cgctgtagtt
    11221 ccttgtaaaa ttggcgtagg tattgcgtta tacagcataa ctgctccacc atcaatatcc
    11281 actattgttt ttccagtaaa gaaagcttta aaaccaatga ttaaattagt caatgcgcct
    11341 ggaaacatgt ataaaaagct aacaatagat ccaatcgcta taattccggc tgtaattatc
    11401 tctccaacca aattcccgac tgccactgct aacgtgtaag aaaataaata caataacaaa
    11461 aaggaactaa tatacatcaa agaatcgctc acactgggta aatacaaccc cggtatttgc
    11521 tggtaaatat accaaaacct acagaaaatg atgattggta ctagtacgaa aattaaaagt
    11581 aatggaataa gcatcttatg ccaaaaaatt tgcttcttgg agtatggcaa tccaaaagta
    11641 aaataatcca tttgcttatt tttctcaaaa acagttaact ttaaccctaa aaacagaaac
    11701 acatagaaga aaagccctaa attcccttca aaatcataag gagttaaact taaatcattt
    11761 tttatttcat tacccgtcat ttgttgatct gctgtattat ttttttgaaa ttcttcagac
    11821 tgataatagt tatagttgtc attaaacata ctaaccgcgt tcgttgcagt cgtagcttca
    11881 gaacctataa aagcgattaa aataaatata aatacccacg cattctgacg ccattctttc
    11941 caaagaagcc ctgcactcat gatttctcgc ctcctagttc ttctagatga taaataaaca
    12001 agtcttctaa tgtgactgcg agttcatcca tgaaaattgg tttttctttt tttattgctg
    12061 cgtataattc tgtgttcata tctcggaata aaatggtgta aacacggcca tacttattaa
    12121 ttactttgcc attttccagt aaaaaaggtg gaattttttt attttcaaaa gcgatctgaa
    12181 ttttaacagc ttgttcccga agtgattcaa gatggtaaga ctcttcaata tgattatctt
    12241 gtaaaatatg aatatagtca gcaatcggat ctaaatcagc taaacgatgg gaagaaataa
    12301 taatgcctaa tttccgcttc tccacttctt ctaataatat gcccataatt ttcttttgag
    12361 caattatatc gagaccttcc attggttcat cgagcaaaat aaattcagct ccgatagata
    12421 gggcaagaac gagcccaaaa agacctttca ttccttttga ataattttga aattttacat
    12481 ctgtagctag gttaacttga ttgagtaagt tatcaaattt agctccgtcg aataatggat
    12541 aagttttttg atagaatttt tttatcgtcg gaatcttata accatcccaa caatttaaac
    12601 tatcttgaag catgaataat ttttgcttta attgagggtt tttgcttaat gcctcatcta
    12661 agtacacatc tccctcatca ggaatataaa aacccataat agttcgaaaa agagttgttt
    12721 tacctacgcc atttcgtccg actataccaa taatttctcc tggctttact tcaaatgtta
    12781 ttttatccaa taagagttcc ccgtcaattt ttttgctaag tgaatcaacc ttcaaccatg
    12841 tcacctccaa tgatgtcttg actatattcg tctgataatc tatgtatttc ttcaacgtta
    12901 attccaaggt aaactaaatc gagaatcgtt tcttttaatt taatttttgt ttctgctagt
    12961 ttttttggtg aacttacttt atcttgttgg ttcgctatga aggtcccttt tccttttacc
    13021 gtgacaatta cttcttgtcg ttctaattct tggtacgctt tactcacagt gtttgggttc
    13081 actccgattc tacttgcaaa ttcacgtata gataatatct tttctccttc ttgaagtatc
    13141 cctttgacaa cttgttcttt aattttttgg acgatctgtt cataaatcgg tagttgactt
    13201 tttgtgttaa tcgtaaacat ctctccccct gctttcatga attctactat
//
LOCUS       DASDYO010000088        13034 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.088, whole genome shotgun sequence.
ACCESSION   DASDYO010000088 DASDYO010000000
VERSION     DASDYO010000088.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 13034)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 13034)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..13034
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.088"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..170
                     /locus_tag="U0290_002065"
     CDS             <1..170
                     /locus_tag="U0290_002065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465752.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PLDc N-terminal domain-containing protein"
                     /protein_id="HEM2302104.1"
                     /translation="PVILLYLALLLTAIIDLTKNWNERKNPVIWLVVIIVINIFGPIA
                     YFIFGRKEEGN"
     gene            170..1075
                     /locus_tag="U0290_002066"
     CDS             170..1075
                     /locus_tag="U0290_002066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465751.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302105.1"
                     /translation="MKKLEIQGLKKKYNGKWVIKGIDLTINEKECVALIGPNGAGKST
                     MINMIVQILTQDEGQITLDGQNAKSVREKIGFLPQYPEFYGWMSATECLHFMGKLSNM
                     EKTDLKTRIKEVLILVGLEESANKKISTYSGGMRQRLGIAQAILHRPELLVLDEPVSA
                     LDPIGRREMMLLLDKLKKEITILFSTHILKDAEEICDRIAIIKNGELVSDKTVVQLME
                     EESSPVFDVEFSGDSEAWQTLLLQNEHVEKIERVGMVYQVYTTNQKAGSEAILKSLLQ
                     IEGEFIRVENRHQSLEEIFMEKVGK"
     gene            1072..1866
                     /locus_tag="U0290_002067"
     CDS             1072..1866
                     /locus_tag="U0290_002067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465750.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease subunit"
                     /protein_id="HEM2302106.1"
                     /translation="MTHFNALLAREWLEQRRSLKIIWLPIVFALLGLTQPLMMYFLPE
                     ILKAVGTGAETEQVIALMGDQSAQEVMAQTLGSQFDQIGIIIIIVVAMACIQNDRTRG
                     MLAFIMTRPVSAAEYVLSKWVMQCMVGLSSLLIGYVLAAYYTYFLFGELAINSLTQAF
                     FVYAIWFIFVISLVVFASAVFDSNAVVAMISVFIAIVLGVISGFGGWIQMFNPAYLSK
                     NATMLIMSDKTMDYFIPTLCITILWIFAFISLTILMIKIKPLPKTE"
     gene            1936..3303
                     /gene="fumC"
                     /locus_tag="U0290_002068"
     CDS             1936..3303
                     /gene="fumC"
                     /locus_tag="U0290_002068"
                     /EC_number="4.2.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465749.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fumarate hydratase"
                     /protein_id="HEM2302107.1"
                     /translation="MERIERDTLGEISVDATKYWGAQTERSKRNFAIGDNPMPIEIIY
                     AFAQLKKATAKVNAAEGKLSEEKAIAIGQVCDQIIQGELDEHFPLVVWQTGSGTQSNM
                     NVNEVIAHVANLTLGEGQIHPNDDVNMSQSSNDTFPTAMHIAAYGALVTKLLPEITKM
                     EAVLAEKKNKYMHLVKIGRTHLQDATPLTLGQEISGWEACLTNNKNYLETSMKAILPL
                     AIGGTAVGTGLNASRDFGDKVAEELMKQTGYPFTSDSNKYFALTSHSPINFVHGSIRS
                     LASDLMKIANDIRLLASGPRSGIGELTIPANEPGSSIMPGKVNPTQCEAMTMVAAQVM
                     GNDVTINVAASQGNFELNVYKPVIIFNFLESVKLLSDSMRSFRLHCLEGLTANEKVIE
                     TKVNDSLMLVTALNPHIGYEKAAKIAKLAFDENTTLKEAAIKTGFVTEKQFDLWIDPL
                     KMTNL"
     gene            3407..4540
                     /locus_tag="U0290_002069"
     CDS             3407..4540
                     /locus_tag="U0290_002069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465748.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF445 domain-containing protein"
                     /protein_id="HEM2302108.1"
                     /translation="MSVLFTILLMAVIGGFIGAMTNYIAIRMLFRPYKAIYLFNKRLP
                     FTPGLIPKRRDELAEHIGKVVVSHLLTEDAIRARLLDENLQKEITDTITKMFHEKMQL
                     ETTPNELLHHFGYENAEIRSMTWVEKTLEKEINHFLTTKKTTKMSDLIPTMLESELTT
                     KLPHVTERITSKMTLFVSSEEGKIQIKQMLQKFFEEHGKMGSMARMFINIDSFSEKIQ
                     QEGLKLIGQEDTKNLINQLLTTEWKNFEAKELQELIPTEKQAHLAGQLTSELIQTFPH
                     EKLFNQPIQEMLRGYEAAITEKVIPFAVERMLDFVATHSAEIVERMDLAKLVETQIAT
                     FSLPEIEKLVVEISGRELKMITYLGGILGGFIGIIQGVLAMWI"
     gene            4622..4975
                     /locus_tag="U0290_002070"
     CDS             4622..4975
                     /locus_tag="U0290_002070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF/YmcA family competence regulator"
                     /protein_id="HEM2302109.1"
                     /translation="MAVNIYDLAHDLDKGIRETPEFISLQDAYREVNENADAKAKFER
                     FRDVQVTIQEKQMTGQEIDDETVDVAQQVAQEVQENELIVKLMEKEQAMSTIINDLNR
                     IIMTPLQDLYNVAND"
     gene            5118..6353
                     /locus_tag="U0290_002071"
     CDS             5118..6353
                     /locus_tag="U0290_002071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="exonuclease SbcCD subunit D"
                     /protein_id="HEM2302110.1"
                     /translation="MKEIQFLHMADLHLDSPFIGLSTLPQPLFSAIQESTFQSLERIT
                     TVAIKEAVDFVLIAGDIYDSEDQSVRAQARFSKEMKRLEVANIPVFMIHGNHDFIEKH
                     KEKLTLPSNVHVFSEQVEVMSHKTATGVSVNIYGFSYNERHIRSSRVDKYKIQGNADF
                     HIALLHGSEVSSSEEHDVYAPFRVQEISKKGFDYWALGHIHKRQLLAESPSIYYPGNI
                     QGRNRKESGEKGASIITLSEASTTIDFIGTSPIIWEEAVITLPENSEINAFYRETTKL
                     LESYQGRSHSYFLHIIVKMENKQKIDTNDWLQMLQEEVEITDNTFVWVHKLTTEITNQ
                     SNSQTWYESHLAGEEIKHSFETLQDESAFYQAVEALYLESGVSRYLDDLSEIDRERLL
                     HDALMELGRTLAEVEGDDK"
     gene            6350..9073
                     /locus_tag="U0290_002072"
     CDS             6350..9073
                     /locus_tag="U0290_002072"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465745.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2302111.1"
                     /translation="MRITSIDIIGYGKWSDAHFNNIANFQVFYGENEAGKSTIMAFIH
                     SILFGFPTKQQSIPRMEPKNGGPYGGRLTLEDTPLGKVIIERLKGKATGDVRIYYGDG
                     QTAGEEKLPEIIGEIDRNTYEAIFSFDIHGLQNIHQWKKKEFERYLLATGTTGSDALL
                     KGAEALQKKLDSLYKPSGRNPLINQQLKKVKEAQHAFQNAKKQNAQYEQLINEKEQAI
                     VRQTELQKEKTTMRVELDALATLADLWPLYQEWKALSNKASETTEATFPPDGVIRLEH
                     LNLREKEWQNQLIQLEERQKNLISNNNYEHSAFFAENEAEVTYLIETYAAFGEREIQL
                     KNLKQEIKFQQVDTKQPLRIWSSELEQTMIHLKEKEQSHKEQQHDIQLKLKFTNNSEE
                     KLQKKIDQIEAEMWDNKTFQQAKEKMQDSPKTSKTKTMVSLGIFAVAFVLMIVFQAIW
                     SVALVFVSALIVGYAFITTGKSSPTNNEQILAFLEQKKIRQEWQQLLNEMDMVASQIA
                     ELRAAENKLSENIYQHTMELRHFFSDLGINTEPSSNWHYELSIYKKNSEKRQLAMELI
                     SKLEPLAEKQEAYRARLENLKLPIDYTDTEEKITFLRQGLLYYRNHLTENAKLAEKLE
                     QVTMQLDLVKQDLLLVKKEKADLLERANVSNEEDFRMAAMRVKEEQKWRERLVLIEAQ
                     LEPEKREALNRYENQATIKEKELQLEESLRQIELEQEQLHASLAAQNHAIDKLEEGGT
                     FAVLMQEFYSEKSKLQQISAEWTETKLALQMLQNTMQQLQEGKLPKTLKLASEYFNHL
                     TSGNYRKVYLQDNRLQVESKDRIPFFPEELSQATKEQLYLAIRFALIDVIHKDFPLPI
                     IIDDGFVHFDSSRMGQMMQLLQKRKSENQVIFFTCHQETRKYFSSEDIRVL"
     gene            9118..10059
                     /gene="yhaM"
                     /locus_tag="U0290_002073"
     CDS             9118..10059
                     /gene="yhaM"
                     /locus_tag="U0290_002073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3'-5' exoribonuclease YhaM"
                     /protein_id="HEM2302112.1"
                     /translation="MEKRLLDFEVGETVDLFLLIKSSVKGTASNGKPFLSLVLQDKSG
                     ELEAKLWDVKESDEANYGVQQIVHLMGDIQNYRGRKQLKIRQIRQATALDGVSASEFM
                     ETAPINKEEMADEITQYIFEMKNANLQRITRALLKKYQDDFYDYPAAMRHHHEFVSGL
                     SFHVVSMLRLAKSVADLYPSVNRDLLYAGVILHDLGKVIELSGPVSTTYTLEGNLIGH
                     ISIVVEEVSKIADELSIDGEEVVVLKHVLLSHHGKGEWGSPKPPLVREAEILHQIDLM
                     DASLNMMDKVLKHTKPGEFSERVFGLDNRSFYNPIFE"
     gene            complement(10100..10981)
                     /locus_tag="U0290_002074"
     CDS             complement(10100..10981)
                     /locus_tag="U0290_002074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="foldase"
                     /protein_id="HEM2302113.1"
                     /translation="MKKKLILGLVMMMALFSLAACGGGGDVVKTDSGDVTQDELYDAM
                     KDKYGSEFVQQLTFEKILGDKYKVSDEDVDKKFNEYKSQYGDQFSAVLAQSGLTEKSF
                     KSQLKYNLLVQKATEANTDTSDKTLKKYYETWQPDITVSHILVADENKAKEVEQKLKD
                     GAKFADLAKEYSTDTATKDNGGQLAPFGPGKMDPAFEKAAYALKNKGDISAPVKTQYG
                     YHIIQMDKPATKTTFEKDKKAVKASYLESQLTTENMQKTLKKEYKDANVKVEDKDLKD
                     AFKDFDGSSSSDSDSSK"
     gene            complement(11098..11637)
                     /locus_tag="U0290_002075"
     CDS             complement(11098..11637)
                     /locus_tag="U0290_002075"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HEM2302114.1"
                     /translation="MRCLKSINTERRDEFNRLFLKGILVWLAAVCICFLTQHLIYPDQ
                     LTNDYQLASFLGIILIYPIHKLLHILGCFKYREGTVIQWRIHFFFLPCIKLNIKRIIP
                     KWHYIFSLILPFVIITTILIVLMLLTPIGHSGMFLILLSVHFGMSFSDFTHIKKLWKM
                     PKNCFIESAERGFSVLISD"
     gene            complement(11820..12182)
                     /locus_tag="U0290_002076"
     CDS             complement(11820..12182)
                     /locus_tag="U0290_002076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YtxH domain-containing protein"
                     /protein_id="HEM2302115.1"
                     /translation="MNKKSLIFGILAGGAIGAAASVLFAPKSGNELRKDIVAKSGEAS
                     VILKELAYNANELIQSVQVLGTEGSTLLKDVSSDIMESVSKWNEEMEPEKKRLKDEIK
                     DMQKTISDLEKTLKKDNK"
     gene            complement(12212..12634)
                     /locus_tag="U0290_002077"
     CDS             complement(12212..12634)
                     /locus_tag="U0290_002077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HIT family protein"
                     /protein_id="HEM2302116.1"
                     /translation="MDDCIFCKIVRGEIPSAKVYEDDEVYAFLDLGQVTEGHTLVIPK
                     KHARNTFDLPDETAAELFRRVPKIARALKEALPIQGLNILNNNEEVAFQSVFHCHIHL
                     IPRYSKSDDFGLKWKDNADWYTQERYQEIAELIAAKVD"
     gene            12795..>13034
                     /locus_tag="U0290_002078"
     CDS             12795..>13034
                     /locus_tag="U0290_002078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465739.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2302117.1"
                     /translation="MALVEVEHLTGGYTKRPVLKDISFAIEEKQIVGLIGLNGAGKST
                     TIKHITGLMHPKQGTIKINNHQLVEDTETYRKQFSY"
BASE COUNT         4549 a         2178 c         2524 g         3783 t
ORIGIN      
        1 tacccgtaat tcttctctat ttagctttat tattaacagc tattattgac ttaacaaaaa
       61 actggaatga acgaaaaaat ccggttatct ggctagttgt tattatcgtt atcaacattt
      121 ttggcccaat tgcctacttt atttttggcc gaaaagagga aggtaactaa tgaaaaaatt
      181 agaaattcaa ggactaaaga aaaaatataa tggcaagtgg gtcattaaag gaattgatct
      241 cacaatcaat gaaaaagaat gcgtggcact tatcgggcct aatggtgcag ggaagtcaac
      301 catgattaat atgattgtcc aaatcttaac gcaggatgaa ggacaaatta ctttagacgg
      361 tcaaaatgca aaatcagttc gcgaaaaaat tggtttttta ccgcaatatc ctgaatttta
      421 tggttggatg agtgcgacag aatgccttca ttttatggga aagctatcta acatggaaaa
      481 aacagattta aaaacacgga ttaaagaagt attaatacta gtaggcttag aagagagtgc
      541 aaataaaaaa attagcacgt attcaggtgg aatgcgacaa cgactcggga ttgctcaagc
      601 tattttgcat cgaccagaac ttcttgtact agatgaacca gtatccgccc ttgatcccat
      661 cggtcgccgg gaaatgatgt tgctattaga caaactaaaa aaagagatta ctatcctatt
      721 ttccacacat atcttaaaag atgctgaaga aatttgtgac cggattgcca tcattaaaaa
      781 tggcgaactg gtctcagata agacagtagt ccaacttatg gaagaagaaa gctcccctgt
      841 gtttgatgtc gaatttagcg gagatagtga agcttggcaa acgttactgc ttcaaaatga
      901 acatgtggag aaaattgaaa gagttggaat ggtttatcaa gtttacacaa ctaaccaaaa
      961 agctgggtca gaagctattt tgaaatcttt attacaaata gaaggtgaat ttattcgtgt
     1021 cgaaaacaga caccaaagct tagaggaaat ctttatggag aaggtgggca aatgacacat
     1081 tttaatgctt tattagcaag agaatggctg gaacaacgtc gaagtttaaa aattatttgg
     1141 cttccgattg tattcgcact tcttggcctc actcaaccac taatgatgta ttttttacca
     1201 gaaattctaa aagcagttgg cacgggagcg gaaacggagc aagtaattgc attaatgggg
     1261 gatcaatcgg ctcaggaagt gatggcacaa acactcggtt cccagtttga tcaaattggc
     1321 attatcatta tcatcgttgt tgcgatggct tgcattcaaa atgaccgaac tagaggcatg
     1381 ttagcgttta tcatgacaag accagtgagc gctgcggaat atgttttatc gaaatgggta
     1441 atgcaatgta tggtggggtt aagttcactt ttaattggct atgtgttggc ggcttattat
     1501 acgtactttt tatttggaga actagcgatc aattctttaa cgcaggcatt ttttgtgtac
     1561 gccatctggt ttattttcgt aattagcttg gttgtttttg cgagcgcggt ttttgatagt
     1621 aatgccgttg ttgcgatgat tagcgtgttt atagcaattg ttttaggggt aatcagtggt
     1681 tttggcggct ggattcaaat gtttaatcca gcatatctaa gtaaaaatgc aacaatgcta
     1741 attatgtctg ataagacgat ggattatttt attccaacac tttgtattac tatcttatgg
     1801 attttcgcat ttataagtct aactatccta atgataaaaa taaaaccact cccaaaaacg
     1861 gaatagcgaa catttttcat gtgttttgcg aaaacatccg ctttatacta aaatagaata
     1921 aaaaggggtg gcgacatgga acgaatagag cgagatacgc ttggagaaat ttctgtagat
     1981 gcgacgaaat attggggagc gcaaacagaa cgaagtaaaa ggaactttgc tattggtgat
     2041 aatcctatgc cgatagaaat tatatatgct tttgctcaat taaagaaagc cactgcaaaa
     2101 gtaaacgcag cagaaggaaa actatccgaa gaaaaagcga tagcgattgg ccaggtttgt
     2161 gatcaaatca ttcaaggaga actagatgag cattttcctt tagtcgtttg gcaaaccgga
     2221 agcggaacgc agagcaacat gaatgtcaat gaagttatcg cacatgttgc caacttaact
     2281 ttaggcgaag gacaaattca tccgaatgat gatgtcaaca tgtcgcaaag ctcgaacgac
     2341 acatttccaa cagcgatgca tatcgctgca tacggggctt tagtaacaaa acttttacct
     2401 gaaataacta aaatggaagc tgttttggca gagaagaaaa ataaatacat gcatctcgtt
     2461 aaaattggca gaacacattt gcaagacgca accccattaa cacttggcca agaaattagt
     2521 ggctgggaag catgtcttac aaataataaa aactatcttg aaacaagtat gaaagcaatt
     2581 ttgccacttg cgattggtgg gacggcagtt ggaactggct taaatgcctc acgtgatttt
     2641 ggtgataagg ttgccgaaga attgatgaaa caaacgggat atccttttac ttctgattcc
     2701 aataagtatt ttgctctaac tagtcatagt ccgattaatt ttgttcatgg atccattcgt
     2761 agccttgctt cggatctaat gaaaattgct aatgatatcc gtttattagc aagtggacca
     2821 cgtagcggca taggtgagtt aacaatccca gctaatgaac caggaagctc cattatgcca
     2881 ggaaaagtaa atcctactca atgtgaagca atgacgatgg tagcggctca agtcatggga
     2941 aatgatgtga caattaatgt tgccgccagc caaggaaact ttgaactcaa tgtctacaag
     3001 ccagttatca tttttaattt cttagaatct gtcaaactgc tttcagatag catgcgttcg
     3061 ttccgattgc attgtttgga aggacttact gcgaatgaaa aagttattga aacaaaagta
     3121 aatgactccc taatgcttgt gacagcattg aatccgcata tcggctatga aaaagctgcc
     3181 aaaattgcca agctggcttt tgatgaaaat acgacattaa aagaagcggc aatcaaaacc
     3241 ggttttgtga cagaaaaaca atttgattta tggattgatc cgttaaaaat gactaatttg
     3301 taatctcata ctttagaatg aacttcccta gaaacaattg ttgtctaggg atttttcacg
     3361 tataatgaaa ccacttttac tagacaaata ttaggagatg caaaacatgt cagtgttatt
     3421 tacgatactt ttaatggctg tgattggcgg atttatcggc gcaatgacga attatatcgc
     3481 catacgaatg ctttttcgcc cttacaaagc catttaccta tttaataaac gtttaccatt
     3541 tactccaggt ttaatcccta aacgacgtga tgaactagcc gaacacatcg gaaaagtagt
     3601 agtgagtcat ttgcttacag aagacgccat tcgtgctcgt ctgctagatg agaatttaca
     3661 aaaagaaata acagatacta ttacgaaaat gttccatgaa aaaatgcaat tagaaaccac
     3721 acccaatgaa ctcctccatc atttcggtta tgaaaatgca gaaattcgtt ctatgacatg
     3781 ggtagaaaaa actttagaga aagaaatcaa ccactttcta actactaaaa aaacgacaaa
     3841 aatgagcgat ttaattccaa ctatgttaga gtcagaacta acaactaaac taccgcatgt
     3901 aacagaaaga atcacgagca aaatgacatt gtttgtatcg agtgaagaag gcaaaattca
     3961 aattaaacaa atgctacaaa aattctttga agaacacggc aaaatgggaa gcatggctag
     4021 aatgtttatt aatattgata gcttttctga aaaaattcaa caagaaggct taaaactcat
     4081 cgggcaagaa gacactaaaa atctaattaa tcaacttcta acaacagaat ggaaaaattt
     4141 cgaagcaaaa gaattacaag agcttatccc gactgaaaag caagctcatt tagctggaca
     4201 acttacttct gaacttatcc aaacttttcc tcacgagaaa ttatttaatc aacccattca
     4261 agagatgcta cgtggctatg aagcagctat tacagaaaaa gtaattcctt ttgcagtaga
     4321 gaggatgctt gattttgtag caacacatag tgcagaaata gtagagagaa tggatttggc
     4381 gaaactcgtt gaaacacaaa ttgccacttt ttctttacct gaaatcgaaa aacttgttgt
     4441 agagatttct ggtagagagt taaaaatgat tacttattta ggtgggattt taggtggatt
     4501 tattggaatt atccaaggtg ttctcgcaat gtggatttag ttcttttata ctggaataac
     4561 cggcgacttt ttgttatagt gaaacagaag tgacaaatac agatatttgg aggatttatc
     4621 aatggcagtt aatatttatg atttagcaca tgatttagac aaaggaattc gtgaaacacc
     4681 tgaattcatc agcttacaag atgcataccg tgaagtaaac gaaaatgcag atgcaaaagc
     4741 aaaattcgaa cgttttcgcg atgttcaagt aactatccaa gaaaaacaaa tgactggtca
     4801 agaaattgac gacgaaacag tagatgtagc acaacaagta gcgcaagaag ttcaagaaaa
     4861 cgaactaatc gttaaattaa tggaaaaaga gcaagcgatg agtacaatta tcaatgatct
     4921 aaatcgcatt atcatgacgc cattacaaga tctttataat gtagctaatg attaattttc
     4981 attaaaccaa gtggctctat tatttgttat ttatttagca gataataggg tcattttttt
     5041 attggaaatg cttgtaccta acgtaatagt aagatataat aagaacgtat attcggtttt
     5101 tataggaggc gaaagtcatg aaagaaatcc aatttttaca tatggctgat ttacatttag
     5161 atagtccttt catcgggctt tcgacactac cacagccact tttttctgcc atacaagaaa
     5221 gcacatttca atcattagaa cgaattacaa ctgtggcgat aaaagaagca gtagatttcg
     5281 ttttaattgc tggagatata tatgatagtg aagatcaaag tgtccgtgct caagcgcgtt
     5341 tttcaaaaga aatgaaacgg ttagaagtgg cgaacatccc cgtgtttatg attcatggaa
     5401 atcatgattt tatagaaaag cataaagaaa aactcacatt accaagcaat gtgcacgttt
     5461 tttcagagca agtagaagta atgtcgcata aaaccgccac tggtgtgagc gttaatattt
     5521 atggatttag ttataatgaa cgtcatattc gctcaagccg agtagataaa tacaagattc
     5581 aaggtaatgc tgattttcac attgcgttat tacatggctc agaagtatct agtagcgaag
     5641 aacatgatgt gtacgcccca tttcgtgtac aagaaattag caaaaaaggt tttgactact
     5701 gggcactagg tcatattcat aagcgacaat tgcttgcaga gtctcctagc atttattacc
     5761 caggaaatat tcaaggtcga aatcgcaaag aatcaggtga aaagggcgcc agtatcatta
     5821 cattatcaga agcaagtaca accattgatt tcattggaac aagtccgatt atttgggaag
     5881 aagctgtaat taccttacca gaaaatagtg agataaatgc cttttaccga gaaactacta
     5941 agttgttaga gagctatcaa ggaagaagtc actcttattt tcttcatata attgttaaga
     6001 tggaaaataa acaaaaaatc gatacgaatg attggttaca aatgcttcaa gaagaagtag
     6061 aaatcacaga taacacattt gtatgggtac acaaattaac aacggagata acgaatcaaa
     6121 gtaattcaca aacatggtac gaatcacatt tagcaggaga agaaatcaag cattcgtttg
     6181 agacactaca agatgaatct gctttttatc aagcagtaga ggctctgtat cttgaaagtg
     6241 gagtgagtag atacttggat gatttgtctg aaattgatcg tgagaggcta ctacatgatg
     6301 ctttaatgga attagggagg acgcttgcag aagtggaagg tgatgataaa tgagaataac
     6361 atctattgat atcattggtt acggaaaatg gtccgatgct cattttaata atattgccaa
     6421 tttccaagta ttctatggtg aaaatgaagc cggaaaatca actattatgg cttttataca
     6481 tagtattttg ttcggtttcc caacgaaaca acaatcgata ccgcgcatgg agccaaaaaa
     6541 cggtggacca tatggtggaa gattaacact agaagacaca cctttaggaa aagtcatcat
     6601 tgaacgcttg aaaggaaaag caacgggaga tgttcggata tattacgggg atggccaaac
     6661 cgctggagaa gaaaaattac cagaaattat cggtgaaatt gatcgaaaca cttatgaggc
     6721 tattttttca tttgatatac acggactaca aaatattcat caatggaaaa agaaagaatt
     6781 tgaacgctat ttgttagcaa ctggaacaac aggatcggac gctcttctaa agggagccga
     6841 agcattacaa aaaaaattag atagtctata taaaccaagt gggcgaaatc cactaattaa
     6901 ccaacaacta aaaaaagtaa aagaagccca acacgctttt caaaacgcaa aaaaacaaaa
     6961 tgcgcaatat gaacaattaa tcaatgagaa agagcaagcg atagtaagac aaacagagct
     7021 acaaaaagaa aaaacaacaa tgcgagttga gttagatgca ttagcaacat tagcggattt
     7081 gtggccgtta taccaagaat ggaaagcact cagtaacaaa gcttctgaaa caacagaagc
     7141 tacttttccg cctgatggag ttattcgttt agaacacttg aatctccgag aaaaagaatg
     7201 gcaaaatcaa cttatccaac tagaagaacg ccaaaaaaat ctaattagca acaataatta
     7261 tgaacatagt gctttttttg ccgaaaatga agcagaagtt acttatctaa tcgaaactta
     7321 tgcagctttt ggagagcgag aaatccagtt aaagaattta aagcaagaga ttaagtttca
     7381 gcaagtcgac acaaaacaac cacttagaat atggtcgagc gaattagaac aaacaatgat
     7441 tcacttaaaa gaaaaagaac agtcccacaa agagcaacaa catgatatcc agctaaaatt
     7501 aaaattcact aataactccg aagaaaaact ccaaaaaaag attgatcaaa tagaagcgga
     7561 gatgtgggat aataaaacat tccaacaagc aaaagaaaaa atgcaggata gtcctaaaac
     7621 ttctaaaact aagacgatgg tttccttggg catatttgca gtagcgttcg tcttgatgat
     7681 agttttccaa gctatttgga gtgtagcact tgtttttgtt tctgcactta tagtgggtta
     7741 tgcttttatt actactggaa aatcttctcc aacaaataat gagcaaattc tagctttttt
     7801 agaacaaaag aaaataagac aagaatggca acaacttttg aacgaaatgg atatggttgc
     7861 ttcacaaatt gctgaattaa gagcagctga gaataaacta agcgaaaata tctaccaaca
     7921 tacgatggaa cttagacact tcttttctga cttgggaata aacactgaac ctagttcgaa
     7981 ctggcattac gaacttagca tctacaaaaa aaacagtgaa aaaaggcaat tagcaatgga
     8041 acttatctcc aaactagaac cattagcaga gaagcaagaa gcatatagag caagattaga
     8101 aaacttaaaa ttgcctatag attatacgga cacggaagaa aaaattactt ttcttcgtca
     8161 aggtttgctc tattatcgaa accacctaac tgaaaatgca aagctcgctg aaaaattaga
     8221 acaagtaacg atgcaattag acttagttaa acaagattta ttacttgtaa agaaagaaaa
     8281 ggcagacttg ctagaacgtg cgaatgtgag taacgaagaa gactttcgta tggctgcaat
     8341 gcgcgtaaaa gaagaacaga agtggcgtga acgattagtt ttaatagaag cgcaacttga
     8401 accagaaaag cgagaagctc taaatagata tgaaaatcaa gcaactatca aagaaaaaga
     8461 gctccaatta gaagaatcac tgcggcaaat agaattagaa caagagcaac ttcacgcctc
     8521 actcgcagca caaaaccatg caatagacaa attggaagaa ggcgggactt tcgctgtatt
     8581 gatgcaagaa ttttattcag aaaaaagcaa attacaacaa atctcagctg agtggacaga
     8641 aacaaaacta gcgcttcaaa tgttgcaaaa cacgatgcag cagttacaag aaggaaaact
     8701 tccaaaaaca ttaaaactgg caagtgaata ttttaatcac ttaactagtg ggaactatag
     8761 gaaagtatac ttacaagata ataggcttca agtagaaagt aaggatagaa ttccgttctt
     8821 cccggaagaa cttagccaag cgactaaaga gcagctatat ttggctattc gttttgcgct
     8881 aattgatgtt attcacaaag actttccact accaatcatt attgatgatg gatttgtgca
     8941 ttttgattcc tcgagaatgg ggcaaatgat gcagctgctt caaaaacgaa aaagtgaaaa
     9001 ccaagtcatt tttttcacat gccatcaaga aactcgcaaa tatttttcca gtgaggacat
     9061 acgcgtgcta taatgggtga agaaacttct tactacagaa agaaagaagg cgatataatg
     9121 gaaaaaagat tattagactt tgaagttggg gaaacagtag acttattctt gctaattaaa
     9181 tcaagcgtaa aaggaacggc tagcaacgga aagcccttct tgagccttgt cttgcaagat
     9241 aaatcaggtg aattagaggc aaaactatgg gatgttaaag aaagtgatga agcgaattac
     9301 ggggtacaac aaatagttca tcttatgggt gatattcaaa attatcgtgg gcgaaaacaa
     9361 ttgaaaatcc gccaaattag acaagctaca gcactggacg gtgttagtgc tagtgaattc
     9421 atggaaaccg cgccaattaa taaagaagaa atggctgatg aaatcacaca atatattttc
     9481 gaaatgaaaa atgcgaattt gcaacgaatt acgcgcgcat tgcttaaaaa atatcaagat
     9541 gatttttatg attatccggc ggcaatgcgt catcatcatg aatttgtttc cggcttgagt
     9601 tttcatgtag tttcgatgtt acgacttgca aaatcagttg ccgatcttta cccatctgtt
     9661 aaccgagatt tattatacgc aggtgtgatt ttacatgatt taggaaaagt cattgagctt
     9721 tcaggccctg tatcaacgac gtatacacta gaaggtaatt taattggcca tatttctatc
     9781 gtagtagaag aagtgagcaa aattgcggac gaactttcga ttgatggtga agaagtcgta
     9841 gttttaaaac acgttcttct atctcatcat ggtaaaggtg agtgggggag tccaaaacca
     9901 ccgcttgttc gagaagccga gattttacac caaattgatt taatggatgc ttccttgaac
     9961 atgatggata aagtactaaa acatacaaaa cctggtgaat tcagtgaacg agtatttggg
    10021 ttagataatc gttcgtttta caatcctata tttgaataaa aaaacacgct tggaaatttc
    10081 caagcgtgtt ttttagtgct tatttagatg agtcgctatc actggatgaa gagccatcaa
    10141 aatctttaaa agcatctttc aagtctttat cttccacttt tacgttagca tctttgtatt
    10201 cttttttaag cgttttttgc atgttctcag tagttagttg agactcaagg taagaagctt
    10261 ttacagcttt tttatctttt tcgaaagttg tttttgttgc aggtttgtcc atttggatga
    10321 tgtggtatcc gtattgtgtt tttactggag cgctgatgtc gcctttgttt ttaagggcat
    10381 aagctgcttt ttcaaatgca ggatccatct taccaggacc gaatggagct aattgtccac
    10441 cattgtcttt agtagcagtg tctgtagagt attcttttgc taaatcagca aattttgcgc
    10501 cgtctttcag tttttgttca acttctttgg ctttgttttc atcagctaca agaatatggc
    10561 ttacagtaat atctggttgc catgtttcat agtatttttt aagtgttttg tcgctagtat
    10621 cagtattggc ttcagtagct ttttgaacta acaagttgta cttaagttgg cttttgaatg
    10681 atttctccgt taagccactt tgagctaaaa ctgcagagaa ttgatctccg tattgtgatt
    10741 tatactcgtt gaatttctta tcaacatctt cgtcgcttac tttgtattta tctccaagaa
    10801 ttttttcgaa agtaagttgt tgtacaaact cagaaccata tttatctttc attgcgtcgt
    10861 aaagctcatc ttgcgttaca tcgccagagt ctgtcttaac gacatctcca ccgccaccgc
    10921 acgctgctag actgaacaat gccatcatca tgacaagtcc aagaattaat ttcttcttca
    10981 ttaaataaaa cacactcctt agttgttgga ataattcccg cttaacacaa taactatcat
    11041 aacataaatt aaaggtaaaa agaaaagatg aaagaaattt aatgatattc ttatggttta
    11101 gtcagaaatt aaaacagaaa atccgcgttc tgcactttcg ataaagcaat tcttcggcat
    11161 tttccataat tttttaatat gtgtaaaatc agaaaagctc attccaaagt ggacagatag
    11221 taatatcagg aacatacctg aatgtccgat gggcgttaaa agcattaaca cgattaaaat
    11281 agtagttata atcacaaatg gtagaattaa cgaaaaaatg taatgccatt ttggtattat
    11341 tcgcttaata tttaatttaa tacaaggaag gaaaaagaag tgaatacgcc actgaataac
    11401 agttccttca cggtatttaa agcatccaag aatatgaagt aatttatgaa ttgggtaaat
    11461 taaaataata cctaaaaagc tagcaagttg ataatcattt gtaagttgat caggatagat
    11521 taaatgttgt gttaaaaaac aaatacatac ggcagctagc cagacaagaa ttccttttag
    11581 gaaaagtcga ttaaattcgt ctcgtcgctc tgtgttgatt gattttaggc agcgcattgt
    11641 aagctttcct ccagttatag ctaaaatagt gctcttccat cagaaggcac catagtattg
    11701 tatgctcaaa tgctacaaaa ttcaagcttt ttttagagaa tttattgtct aattatgacg
    11761 tttttttgaa agggacttta gacaaataaa aaaactgagc agtcgcccag tttctctact
    11821 tatttattat ctttttttag cgttttttct aagtcggaaa ttgttttttg catatcttta
    11881 atctcgtctt ttaggcgttt cttctcaggt tccatttctt cattccattt ggaaacagat
    11941 tccatgatgt cagaagaaac atcttttaat aaagtggaac cttctgtgcc gagaacttga
    12001 acggattgga taagttcatt tgcattatat gcgagttctt tcaaaataac acttgcttca
    12061 cctgatttag cgacaatatc ttttcgaagc tcattgccgg attttggagc aaataatacc
    12121 gaggctgcgg ctccaattgc cccaccagct aaaataccga aaataagtga ttttttattc
    12181 atttatactc cactccatcc ataaagtcat tttagtctac ttttgctgca ataagttcag
    12241 caatttcttg gtaacgttct tgtgtatacc agtctgcgtt atctttccat tttaacccaa
    12301 agtcgtctga tttgctatac cttggtatta aatggatatg acaatgaaaa acagattgga
    12361 aagcaacttc ttcattatta tttaaaatat ttaatccttg aatcggtaaa gcttctttta
    12421 atgcccgcgc gatttttggt acgcggcgga ataattcagc ggccgtttca tcgggtaaat
    12481 cgaatgtgtt cctagcatgt tttttgggaa ttacgagtgt atgaccttct gtaacttggc
    12541 ctaaatcgag gaaagcatat acttcatcat cttcatacac tttggcagaa ggaatttcgc
    12601 cacgaactat tttgcagaaa atgcaatcgt ccattaagta tgaccacctt tcattacata
    12661 taattatgta ctattttaat ttaacataaa aagcagtgaa aagcatgtgt tagatagtag
    12721 atggtggatt attttgacag ttcaagggac gaatatgcta ttattaacta aagattacgt
    12781 aaggaggtat ggaaatggct ttagtagaag ttgaacacct gacgggcggg tataccaaac
    12841 gtccagtctt aaaagatatt tcgtttgcga ttgaagaaaa acaaattgtt ggcttaattg
    12901 ggctaaacgg ggcagggaaa agtacgacca ttaagcatat aactggtcta atgcatccta
    12961 aacaaggaac gattaaaatc aataatcacc aattagtgga agatacagaa acatatagaa
    13021 agcaattctc ttat
//
LOCUS       DASDYO010000089        12918 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.089, whole genome shotgun sequence.
ACCESSION   DASDYO010000089 DASDYO010000000
VERSION     DASDYO010000089.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12918)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12918)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12918
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.089"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..578
                     /locus_tag="U0290_002079"
     CDS             <1..578
                     /locus_tag="U0290_002079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302118.1"
                     /translation="LSLLCIPLLYYILIYSRAKKFIRTRYQLRSFAELTTMRRYLLYA
                     YLEKSGFSTRADLEKLIRFIHSEMAEEKKNYQPLSTVVGVFIAAFLAILGGTFLFLMD
                     DVVERLIAAVLIMVMAILLYIVGTFIMSIIRSKSENNTKKERVLTKEIIAIQTAMLVS
                     ENTSYHPFLAMERKIAENDFLKEIITSRSFL"
     gene            614..1261
                     /locus_tag="U0290_002080"
     CDS             614..1261
                     /locus_tag="U0290_002080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464299.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302119.1"
                     /translation="MTTKRKETRESVCYREIKKKIRNGELKPGDRLIENTLSQQLEIS
                     RTPIRKAIGMLAADGYVEYNDFRGAFVRDSIINKERYFEMTEIIGLFLKQAIQKIRTK
                     KIAFNKMRVVAKLVEIEREQPTDPATYFEYEKWFVSDLLTYMKNNYYLKISDDFFNNI
                     QEFGDEEVIKIAQNACVKTIANIQRFIDALDVQDYDKCIAIIDQVIDAHVLVAYR"
     gene            complement(1302..2291)
                     /locus_tag="U0290_002081"
     CDS             complement(1302..2291)
                     /locus_tag="U0290_002081"
                     /EC_number="1.3.1.95"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464300.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acryloyl-CoA reductase"
                     /protein_id="HEM2302120.1"
                     /translation="MKSFQALFIEKEADNTSLHFRETTIDNLPENEVTIEVHYSGINY
                     KDGLAVLPDGKIVSEYPFIPGIDASGVVVHSKSDQFQVGDEVIVTSYDFGVSYFGGYS
                     EFIRVPAAWVVPLPDGLSLKEAMILGTAGFTAALSVDALEFSGVTPDAGKIAVSGATG
                     GVGSLSSAILSKRGFSVVASSGKSDAKEFLEKFGVSEIVLREAFQPEKVRALDKQLYA
                     GAIDCVGGKPLSYLLTAVQYGGAVTTCGMSAGGKLDTTVFPFILRGIQLFGIDSVLCP
                     MPKRERIWNRLATDFKLTNLESLVTEVGFSELPEALHQVMNGGVTGRYLVKIK"
     gene            2470..3399
                     /locus_tag="U0290_002082"
     CDS             2470..3399
                     /locus_tag="U0290_002082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464301.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family lipid kinase"
                     /protein_id="HEM2302121.1"
                     /translation="MGKALLIVNPSSGKEKGKTYQGKTEEVLKKRYDEVEVRLTEKAG
                     DATEFASWAAEQGFEAVIAMGGDGTLNETINGLAIHEKRPDFGFIPLGTVNDLARSVG
                     IPLKPEKAIQALEKAIAVPMDIGRIGDQYFMNVLAIGMIAQAVDQVSVEQKTKFGSVA
                     YFLEGLKAFNRNELLHFKIEYDEEVWEGEAALVVAGLTNSVGGMESWAPDAKIDDGYL
                     HIIILTKLGLLDAANMIPQLIRGNLKNSDGVVYIKTKKLTIDASGDDLSINVDGDPGP
                     GVPAEIEVLGSHLNILAPKKSSKKRFGPFILKK"
     gene            3439..3771
                     /locus_tag="U0290_002083"
     CDS             3439..3771
                     /locus_tag="U0290_002083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464302.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302122.1"
                     /translation="MEEELEVIHKGLANAKNGFKAVPGKLYLTATYIVHKPNDYFDEE
                     INIPLNRVAKIRGVRTKILGKELLSNILEIDMISGVKYQFVVNKQKKWLEAVSEVLES
                     RGESEKLG"
     gene            complement(3809..4675)
                     /locus_tag="U0290_002084"
     CDS             complement(3809..4675)
                     /locus_tag="U0290_002084"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464303.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ROK family protein"
                     /protein_id="HEM2302123.1"
                     /translation="MTILAFDLGGTAVKFGVLTTAGEILEKGKFKTPDNLDEMLQSLM
                     DVKANYDYTFQGAAFSCPGAVNNETGIIGGASAIPYIHNFPFKQLLEEKLGLPVTMEN
                     DANCAALAEVWIGAAKDKQDIIFMILGSGVGGAVIRGGKVHHGANLHGGEFGYMLMDR
                     DGRTLSELGTVVNAATRIAERLEVPKASIDGLRAFELRAEGNKIAKEELDTMFYYLAR
                     SIFNLQYALDPELVVIGGGVSERADFIQELTEYVAKVKASVPIATISPTVVGCHFGND
                     ANLIGATAFHLA"
     gene            4834..5217
                     /locus_tag="U0290_002085"
     CDS             4834..5217
                     /locus_tag="U0290_002085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464304.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302124.1"
                     /translation="MEIKVQKKLTDGRIAFSSEYGECVGIWADEDPEPSRVYTVEITI
                     PDMISAELLHESEEKHCALEIDEEGLVHVIGKLEDYEEDGFAVLRLEESIICFDTKFS
                     EEIEMLHGRFVEFVIPEIKLSNVGI"
     gene            5671..6021
                     /locus_tag="U0290_002086"
     CDS             5671..6021
                     /locus_tag="U0290_002086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731234.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302125.1"
                     /translation="MKKKKWLQLIMAVIVLCAIIFGIKWLLYRDNLVEMMQVDDTLYI
                     VSYEPAKQEDALEKIGEIEHRIRHYRIPNKNFTSNYLSEGTELYKAKNGDEFPRTILF
                     KEDGEYFIASEAMK"
     gene            complement(6223..6690)
                     /locus_tag="U0290_002087"
     CDS             complement(6223..6690)
                     /locus_tag="U0290_002087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464306.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YobD family protein"
                     /protein_id="HEM2302126.1"
                     /translation="MVWDATNIFLFAANILTVLYILYNDAVIPLWKGKTVLSVKLRSR
                     GRWDGYIFVGIIVLLFVSNTFFREGPFSTSVLLGIMGVLFIYICFFRSSKAVFKESGL
                     FYALLFFPYAKIERMNLSEDGVLVIETNRQRLMLFARSEKDLEKMLAVFTTYS"
     gene            complement(6872..7750)
                     /locus_tag="U0290_002088"
     CDS             complement(6872..7750)
                     /locus_tag="U0290_002088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464308.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HEM2302127.1"
                     /translation="MSEQITVNEKKITKSDLMGVFIRSNLFQGSWNFERMQSLGFCFS
                     VIPVIKRLYPEKGPEREQAIKRHLEFFNTHPYMAAPILGVTTAMEEQKANGADIDDGA
                     INGIKVGLMGPLAGVGDPIFWGTVRPVLAALGAGFATDGSIIGPILFFVLFNAIRLGF
                     RYWGVFYGYTKGTDVVSDMSGGLLQKLTEGASILGLFVMGALVNKWTTIYVPLVAYTT
                     EDSKTGKDVPTTVQSILDQLMPGLLALLLTFACMWILKKKVNALWLILGLFVVGILGY
                     WSGILGLPPAGYSPLG"
     gene            complement(7768..8583)
                     /locus_tag="U0290_002089"
     CDS             complement(7768..8583)
                     /locus_tag="U0290_002089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464309.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose/fructose/sorbose transporter subunit
                     IIC"
                     /protein_id="HEM2302128.1"
                     /translation="MSAIQLILVFLVSCISGMGSILDEWQTHRPLIACTLIGLVLGDI
                     TTGIIIGGTLEMIALGWMNIGAAVAPDAALASIISTILVITGGQDISVGISLAIPLAA
                     LGQVLTILVRTITVAFQHMADKAGKEGNLRSLDWIHVTALLLQAMRIAIPAVIVAVTV
                     GTQAVENLLNAIPDVIVNGLNVAGGFIVVVGYAMVINMMSAKYLMPFFFLGFVVAAFT
                     AFNLVALGVLGLVAAIIYIQLNPKYQLKEAIQQYGGGGGGRSADDDLDDDLDD"
     gene            complement(8758..9246)
                     /gene="manX"
                     /locus_tag="U0290_002090"
     CDS             complement(8758..9246)
                     /gene="manX"
                     /locus_tag="U0290_002090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003229832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IIAB"
                     /protein_id="HEM2302129.1"
                     /translation="MMEIRLARIDDRLIHGQVATVWTKETQVERIIVISDDVAKDEVR
                     KTLLTQVAPPGVKASVVDVQKGIRVYNNPKYATTPVMLLFTNPTDVLTLVEAGVNITT
                     VNIGGMAFREGKHMITNAVSVDETDEAAFRKLDEKGIELEIRKVASDNKVKLIPLLDK
                     DK"
     gene            complement(9243..9677)
                     /locus_tag="U0290_002091"
     CDS             complement(9243..9677)
                     /locus_tag="U0290_002091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464311.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS mannose transporter subunit IID"
                     /protein_id="HEM2302130.1"
                     /translation="MPVGIIIGTHGEAARELLKSTEMIIGKQDNVEFITFVPGENTDT
                     LITKYKEKLDKLDTSEGVIFMVDLFGGSPYNASSQIALPEDNMDVVTGVNIPMLLETL
                     SMRAASNQKDLVETALTAGSGGVKSLKQSLPKIETEVGEDDL"
     gene            complement(9965..12781)
                     /locus_tag="U0290_002092"
     CDS             complement(9965..12781)
                     /locus_tag="U0290_002092"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464312.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sigma-54-dependent transcriptional regulator"
                     /protein_id="HEM2302131.1"
                     /translation="MKRIDRIYEFILENPSTKTIREQLEKNEGFTASTISETLSILRN
                     NVSMELNELHRQGKIIKIVGRPVLYFPKKAVEDEIGRTLSDNELEFDSCEPLLKMLKP
                     SIVERSPFDDLIGVNDSLKTPVEQAKAAVLYPPNGLHTMILGQTGVGKTLFANLMYRF
                     SQHAKRLPADAPFIIFNCADYYNNPQLLMSHIFGHVKGAFTGADNDKGGLVEKAEGGI
                     LFLDEIHRLPPEGQEMIFYLMDSGTYNKLGETDRTRKSNVLIIGATTENPESSLLKTF
                     MRRIPIIITLPSLEERTAFERVELLKYLLSSEAHRVNKPIRIEDEAAKALIGNTTYGN
                     IGQLKSNIQLVCAQGFLNSFDKDEEILIDFKTLPINIKDGFFHFSNRRKELQAIAEYL
                     EPYTTIFPELNNTLITSDEYEPNFNLYKIIEDKASILMDQGVEDDDIKKFIKMDIDIH
                     LNSFYNKFKNTIHNRENILKIVNEEILNFAEGVELRIEHQLGKKLNERFLLAFSLHLT
                     SFIKRIESNKPLKYTNIENVVNDQPEAYELSREIKDDIEATFHIRVPNMEVMYLTLLI
                     SSLLKEQENARVAVLVATHGNNTASSMVSVAKKLLGEGLVEGIDMPLDQSPKIVLDKL
                     TERAKEMDMGRGLLLLVDMGSLTSFAPVISERTGIPVRSIDMVSTATVIEAVRKSNIL
                     DMELDSIYDSLKDFRGYGGYNSDDDTLDSNQKPHAIITICATGEGTAEKLQLFIENIL
                     DTITTDAIKVIPIGLHEMDTKLEQLQEENDILMAVGIQDPKIQIPFIPLERLFGIDGE
                     EQLVSLVKQRNIIVKKGETGRIAKEIIEESLNEFLTYLNPKKTIEILSSFASVLEKKL
                     GYKLDNTFKINLLIHVGCALERMVLNDGLIYREPKDMLETNIFKALEQTNKEVIYKMN
                     LKLTNDELCYLYDILNEIQPEVLS"
BASE COUNT         4142 a         2466 c         2442 g         3868 t
ORIGIN      
        1 tattaagttt attatgtatt cctctcttat actacatttt gatttacagt cgagctaaga
       61 aattcatcag aacacggtat caattgcgga gttttgctga actaacaacc atgcgccgct
      121 atttattata tgcttattta gaaaaaagtg gttttagtac acgagctgat ttggaaaaat
      181 taattcgttt tattcattct gaaatggcag aagaaaagaa aaattatcaa ccactcagta
      241 ctgttgtggg cgtttttata gcagcatttt tagcaatttt aggcggtaca tttctatttt
      301 tgatggatga tgtggtggag cggcttatcg cagcggttct aatcatggta atggcaattt
      361 tactttatat tgtaggcact tttattatgt cgataattcg ctctaaatca gaaaataata
      421 cgaaaaaaga acgggtatta acaaaagaaa ttatagcaat tcaaacggca atgcttgtta
      481 gtgagaatac tagttaccac ccatttttag cgatggagag aaaaatagct gaaaacgatt
      541 ttttgaaaga gattattaca tcacgatcct ttttataaac acaaggttat agacatattt
      601 aggaggcaga ataatgacaa ccaaacgcaa agagactaga gaaagtgttt gttatcggga
      661 aatcaaaaag aagattagaa acggggaact aaagccaggc gatcgtttaa ttgaaaatac
      721 attatcacaa caattagaaa ttagtcgtac gccgattcga aaagcaatcg ggatgcttgc
      781 tgcagatgga tatgtggaat acaacgattt tcgaggtgct tttgttcggg acagcattat
      841 taataaagaa cgttactttg aaatgacaga aattattggt ttgtttctaa aacaagctat
      901 ccaaaaaatc cgtacaaaaa aaatagcctt caataaaatg cgagttgttg caaaattagt
      961 cgaaattgaa cgcgaacaac caaccgaccc agcaacttat ttcgaatatg aaaaatggtt
     1021 tgtgagtgat ttactaacct atatgaaaaa taattactat ttgaaaatta gcgatgattt
     1081 ttttaataat attcaagaat ttggtgatga agaagtcatt aagattgcac aaaacgcttg
     1141 tgttaaaaca atcgctaaca tccaacgttt tattgatgcg ttggatgtac aagattatga
     1201 caagtgcata gcgattattg atcaagtcat tgatgcccat gttttagtcg cttatcgtta
     1261 aaaaagcatt gtccttacta cttaaggaca atgcttttta tttattttat tttcactaaa
     1321 tatctaccag tcacgccacc gttcattact tggtgaagag cttcaggtaa ctcagaaaag
     1381 cccacttctg ttactaagct ttctaaatta gttaatttga aatctgtcgc aagtctattc
     1441 caaattcgtt ctcgttttgg catcggacat aaaactgaat caataccgaa taattgaata
     1501 ccacgcaaaa taaatggaaa gacagttgta tctaattttc caccagcaga cataccgcat
     1561 gtagtaactg ccccgccata ttgaacagct gttaggaggt atgaaagagg ttttccacca
     1621 acacagtcaa tggccccggc gtatagttgt ttgtctaatg cgcgcacttt ttcaggttga
     1681 aaagcttctc ttaaaactat ttcagataca ccgaattttt ctaggaattc ctttgcatcg
     1741 ctttttccag aagaagctac aacagagaag cctcgtttgg aaagtatggc tgagcttaaa
     1801 ctacctacac cgcctgttgc accacttaca gcgatttttc cagcatcggg tgttacgcca
     1861 ctaaattcaa gcgcatcgac cgagagtgct gctgtaaagc ccgctgtgcc tagtatcatc
     1921 gcttctttta atgatagacc atctggcaaa ggaacaaccc aagcagctgg aacgcgaata
     1981 aactcactat atccaccaaa atagctcact ccaaaatcat aactagtgac aataacctca
     2041 tcgcctactt gaaattggtc agatttagaa tggacgacca caccacttgc atcaatacca
     2101 ggaataaaag gatactcgct cacaattttc ccgtctggaa gtacagccag tccatctttg
     2161 tagttaatac cagaataatg tacctcaatc gttacttcat tttctggcaa gttatctata
     2221 gtagtttctc taaaatgaag ggaagtatta tctgcttctt tttcaatgaa aagtgcttga
     2281 aatgatttca ttttttaaat tcctccacaa ctcaattttg tgttcccctt cactttacga
     2341 cttttttcgc cattttacaa ggctgtgact ggtacaaatc cccatttcaa ggtaaactag
     2401 aatagagaag atgccgatat tttgtgtaaa tttataaata gaattttttg gcaagaaagg
     2461 gtgagtgcga tggggaaggc actattgatt gtgaatccat catcaggtaa agaaaaagga
     2521 aaaacttatc aaggaaagac agaagaagta ctaaaaaaac gttatgatga ggtggaagtt
     2581 cgcctgactg aaaaagcagg ggatgcaaca gaatttgctt cctgggctgc tgaacaaggc
     2641 tttgaagcag taattgcgat gggcggagac gggactttaa atgaaaccat aaacggactt
     2701 gcaatccatg aaaaacgacc tgactttggc ttcattccac ttggaacagt caatgatttg
     2761 gctcgttcgg taggtatacc attaaaaccc gaaaaagcga ttcaagcatt agaaaaagct
     2821 attgcagtgc cgatggatat tggccggatt ggcgaccaat actttatgaa cgtcctagct
     2881 atcggtatga ttgcgcaagc tgtcgaccaa gttagcgtcg aacaaaaaac caaatttggc
     2941 tccgtagcat actttttaga gggcctgaaa gcatttaacc gcaatgaatt acttcatttt
     3001 aaaatcgaat atgacgagga agtttgggaa ggggaagctg cgctagttgt ggctggctta
     3061 actaattcag ttggtgggat ggaatcatgg gcgccagatg caaaaattga cgatggctac
     3121 ctgcatatta ttattctaac gaaacttggc ttgcttgatg cagccaatat gatcccgcaa
     3181 ttaattcgcg gtaatttaaa aaacagtgac ggtgtagttt atattaaaac caagaaactt
     3241 accattgatg caagtggaga cgatttaagc atcaacgtcg atggcgaccc aggtccaggt
     3301 gtaccagcag aaatcgaagt gcttggcagt cacttgaata tccttgcacc caaaaaaagc
     3361 agcaagaagc gcttcggccc attcatactt aaaaagtaac ctacaataat tgtagaagaa
     3421 taaggagatg aaagctttat ggaagaagaa ttagaagtca ttcataaagg tcttgccaat
     3481 gcgaaaaatg gttttaaagc agtccccgga aaactttatt taacagcaac gtatattgtc
     3541 cacaaaccaa atgattactt tgacgaagaa atcaatattc cgctgaatcg agtagcaaaa
     3601 attcggggtg tccgcaccaa aatccttgga aaagaattac tctccaacat tttagaaata
     3661 gacatgatat ccggagtaaa gtaccaattc gttgtaaaca aacagaaaaa gtggctggaa
     3721 gcagtttctg aagtattaga aagccgcggt gaatcagaaa aattaggata gaaagaagct
     3781 ggcacgaaaa aagtgaccag cttctttttt atgctaaatg aaatgcagtt gcaccaatga
     3841 gattggcatc atttccaaag tgacagccaa caacagtagg gctaatagtc gcaattggta
     3901 cagacgcttt tactttcgcc acatattcgg tcaactcttg aataaaatca gcccgctcac
     3961 ttacaccacc accaatgacg actagttcag gatcaagtgc gtactgcaaa ttaaatatac
     4021 ttctcgcaag ataataaaac atcgtatcta gctcttcttt tgcgatttta tttccttccg
     4081 cacgtaattc aaatgcccga agaccgtcta tactagcttt tggaacttct aaacgctcgg
     4141 ctattctcgt cgcagcattt acgactgtac caagctcgct aagtgtgcgt ccgtcgcggt
     4201 ccatcaacat ataaccaaat tcaccaccat gcaaattggc cccgtgatgt accttgccac
     4261 cgcgaataac tgcgccacca actccacttc caagaatcat aaaaataata tcttgcttgt
     4321 ctttcgccgc gccaatccaa acctctgcta aagctgcaca gttggcgtca ttttccatcg
     4381 taacaggaag ccccagtttt tcttcaagta attgtttaaa agggaaatta tgtatgtagg
     4441 ggatggcact cgcgccgcca atgataccgg tttcattatt aaccgcacct ggacaactaa
     4501 acgcagctcc ttggaatgta taatcgtaat ttgcttttac atccataagc gattgcagca
     4561 tttcatccaa attatccggg gttttgaatt tacctttttc tagaatttct ccagctgttg
     4621 ttaacacgcc aaacttcact gctgttccac ctaaatcaaa tgcaagtatc gtcattaccc
     4681 aatctccttt ttaatagaaa agtatatact tatcatactt ttaaacaata caaatgacaa
     4741 ataaaaagtg aaaatacttt gctaaaaatt aacgtccttt tctattttgt gctataataa
     4801 agcaagaatt tgaagcgcag gaggaaatgg ttagtggaga taaaggttca aaagaaattg
     4861 actgacggca gaatcgcttt tagtagtgaa tatggtgaat gcgttggtat atgggccgat
     4921 gaagacccag aaccaagtag ggtttacaca gtagaaatta caataccgga catgattagc
     4981 gcagaactgc tacacgagag tgaagagaaa cattgtgcat tagaaataga cgaagaaggc
     5041 ttagttcacg taattgggaa gttagaggat tacgaggaag atggctttgc agtgctccgc
     5101 ttagaagaaa gtattatttg ttttgacacg aaattcagtg aagaaatcga aatgctccat
     5161 ggaagatttg ttgaatttgt tattccggaa ataaaattaa gtaatgttgg tatatagatt
     5221 gaaatgaaag aggcaggaaa cagatagtga gagtttcctg tctttttttt gttatttgga
     5281 aggagtgctt gaataattat tcattcgtga attataatta atgtgaaata ataaaacaaa
     5341 taggtagtaa ttagcggtta aatagttatt ttatagtagt aaatacgaat tttttgtgac
     5401 gaagaaaaat tgattgcata aaaagtgaat agtgcttcat attgtgtaag attttattat
     5461 tgaaatggag atattaccca tactgtgtaa gaataaatct aaataaagcc agttttaagg
     5521 tattcatgac aagaatcaga catttcatta catttttggt tatacattgg ctttttatga
     5581 tacactcatc gtgcaacaaa atataccaac attgtgacgg aatggtttat taaaagcggt
     5641 aataaataaa atgaaaagtg agataataga atgaagaaga aaaaatggtt gcaattaata
     5701 atggcagtaa tagttctttg tgcaataata ttcgggataa aatggttatt atatagagac
     5761 aatcttgtag aaatgatgca agttgacgac actttatata tagtgtcgta tgaaccagca
     5821 aagcaagaag atgctttaga gaaaattggt gagatagagc atagaattcg ccattaccgg
     5881 ataccgaata aaaatttcac atctaattat ttaagcgaag ggacagaact ttataaagcg
     5941 aaaaatggag atgagtttcc aaggactatt ttgtttaaag aagacggcga atattttatt
     6001 gcatcagagg ctatgaagta gcctaataaa aagcgttagt ttattttttc tcttaataga
     6061 gaaagtttat cgtctacaac taaatggaac atatgtaaaa gtatactgat tggcatactt
     6121 ttcattttta agaaaaatca ttgattctaa atttaagtag agtgaacata aaaaacgcca
     6181 tgcttcattt ccctaaaaac agggaagtaa gcgtggcgtt ttttagctat atgtagtaaa
     6241 tacagcgagc attttttcta aatctttctc ggatcttgca aagagcatca aacgctggcg
     6301 attggtttca atcacgagca caccatcctc tgacaaattc atccgttcga tttttgcata
     6361 agggaagaat aacagggcgt aaaaaagtcc ggattctttg aaaacagctt tcgaactgcg
     6421 aaagaagcag atatagatga ataacacacc cataatccca agcagaacag aagtggaaaa
     6481 tggtccttca cgaaagaacg tattggaaac gaataacaga acgataattc caacaaaaat
     6541 ataaccgtcc cagcgtccac gagaacgcaa tttgacactt aaaaccgtct tccctttcca
     6601 aagtggaatt actgcatcat tatacaaaat atacagtacc gtcaagatgt ttgccgcaaa
     6661 caaaaagata ttagtagcat cccaaaccat tttagctatc actcacaatc tatcattgat
     6721 atagtttagt aatattgtaa cataattatg cggggaagag ggggaactgg gtttgaggat
     6781 aatcatttag agaggctctt tcggcacgat aagacacaaa aaagaaccgg aattttaatc
     6841 ccggttcttt tcgaattatt ataaccaccc attacccaag tggtgaataa ccagctggtg
     6901 gaagtcctaa gataccagac cagtaaccta gaataccaac aacgaatagt cctaaaatca
     6961 accataaagc attgactttc ttcttgagta tccacataca agcgaatgtg agtagaaggg
     7021 caagaagacc tggcattaat tggtccaaga tactttgaac agtagttgga acgtctttac
     7081 cagttttaga gtcttctgtt gtataagcta ctagtggaac atagattgtg gtccatttat
     7141 taacaagggc acccatgacg aatagtccaa gaatggaagc tccttctgtt agtttttgaa
     7201 gcaaaccgcc agacatatca gatacaacat ctgtaccttt tgtatatccg tagaacacgc
     7261 cccaataacg gaaacctaaa cgaattgcat taaatagtac gaagaataaa attggtccga
     7321 tgatactacc gtcagttgca aaccctgcac ctaaagcggc aagtactgga cgaactgttc
     7381 cccagaaaat tggatcccca acgccggcaa gtggtcccat tagacctact ttaataccat
     7441 tgattgcacc gtcgtcgata tcagcaccat tggctttttg ttcttccatc gcggttgtta
     7501 cacctaagat aggagcggcc atatatggat gcgtattaaa gaactcaagg tgacgtttga
     7561 tagcttgttc tctttcaggt cctttttcag gataaagacg tttaattact ggaattactg
     7621 agaaacagaa tcctagagat tgcatacgtt caaagttcca cgacccttgg aagaggttgg
     7681 aacgtatgaa cacgcccatt aagtcacttt tcgttatttt cttttcatta actgtaattt
     7741 gttcactcat atttttctcc cccttcctta gtcgtcaagg tcgtcgtcga gatcatcatc
     7801 cgctgatcgt ccgccgccgc ccccgccgta ttgttggata gcttctttca attgatattt
     7861 agggtttagt tggatataaa tgattgctgc aactagtcct aaaacaccta gtgctactaa
     7921 gttaaacgca gtaaatgctg cgacaacaaa acctaagaag aagaaaggca ttaaatattt
     7981 agcggacatc atgttaataa ccatggcgta accaacaaca acgataaatc caccagctac
     8041 gtttagacca ttaacaataa cgtccggaat ggcattgagt aaattttcga ctgcttgtgt
     8101 accaactgtt accgcaacga taacggctgg aattgcaata cgcatagctt gaagtagtag
     8161 tgctgtaaca tgtatccagt cgagacttcg cagattacct tccttaccag ctttatcagc
     8221 catgtgttgg aatgcaactg taattgtacg aactagaatt gtaagtactt gaccaagagc
     8281 agctagagga atcgcaagcg aaatacctac gctgatatct tgtcccccag taataactaa
     8341 gatagtagaa ataatggatg caagggcagc atctggagca accgcagctc cgatattcat
     8401 ccatccaagc gcgatcattt caagtgttcc cccaataata ataccagttg taatatcccc
     8461 aagaacaaga ccaattaacg tacaggcaat taatggacgg tgcgtttgcc actcatccaa
     8521 aatactaccc ataccactaa tacaggatac gaggaatact aggattaatt gtattgctga
     8581 catatatttc cctcccaatt tttctttaga atgataaaaa aagataattt cattatgatg
     8641 actgaataaa ttaagcatct attacataag cttttattca tgaatcaccc ctttaaaggt
     8701 cttcctttaa acgtttgcat tttcggggct ctaaaaaaca agcgagccgc ggatgaatta
     8761 tttatcttta tctagtaatg ggataagttt gactttattg tcagaagcga ctttacgaat
     8821 ttcaagttca attccttttt catctaattt gcggaatgct gcttcatccg tttcgtccac
     8881 agacacagca tttgtaatca tgtgtttacc ttcgcggaat gccataccac caatgtttac
     8941 agttgtaatg tttacacctg cttctacgag tgttagcaca tcggtagggt tagtgaataa
     9001 tagcatgact ggagttgtag catatttagg gttgttgtat acgcggatac ctttttgtac
     9061 atccacgacg cttgctttaa ctcctggagg tgctacttgt gtaagaagtg ttttacgcac
     9121 ttcatctttt gctacatcgt cactaataac gatgatacgt tctacctgcg tttcttttgt
     9181 ccaaacggtt gctacttgac catgaattaa gcgatcatca atacgtgcta agcgaatttc
     9241 cattataaat cgtcctcccc gacttcggtt tctatttttg gtaatgattg tttgagtgac
     9301 ttaacgccac ctgatcctgc tgtaagagct gtttcaacta gatctttttg attacttgca
     9361 gcccgcattg agagcgtttc aagtaacatg ggaatattga cccccgtgac aacatccata
     9421 ttgtcttctg gaagggcgat ttggctagat gcgttataag gactgccgcc aaataaatca
     9481 accataaaaa taacgccttc agaagtatcc aatttgtcta gtttttcttt gtatttggta
     9541 ataagcgtat cagtgttttc tccaggaaca aaagtaataa attctacatt gtcctgtttg
     9601 ccgataatca tttcagttga tttcaacaat tcacgcgcag cttcaccatg tgtgccaatg
     9661 ataattccaa ctggcatagg tatctcctcc ttaagcgtgg atataatcat ccattaatac
     9721 taacgcaaaa actgtgccaa catttctgta ttaaacaacc tcctttgcta atagaagcgg
     9781 ttcaaggctt ttgtaagcgt gtactaacag aagcggcgcg ccttaatacg ctagatacgt
     9841 agcttaatac actaagtact aatcttagac atacatacat cattacccta aaagattagc
     9901 cagaaaacgc aattgctgaa aataaaacaa gccaacttat gaaaaaatgt tggcttgttt
     9961 gtaattatga aagtacttct ggttggattt cgttcaaaat atcatacaaa taacatagtt
    10021 cgtcattcgt cagttttaag ttcattttgt agataacttc tttatttgtt tgttccagcg
    10081 ctttaaagat atttgtttca agcatatctt ttggttcacg gtaaattaaa ccatcattta
    10141 gaaccatacg ctctaaggcg caaccgacat ggatgagtag attgatttta aaggtattat
    10201 caagtttgta tcctagcttt ttctccagta cactagcaaa cgagcttaga atttcaatcg
    10261 ttttcttcgg attgaggtag gttagaaatt cgttaagact ttcttcgata atttcttttg
    10321 cgatgcgacc agtttcgcct ttttttacga taatattacg ttgcttcacg aggctaacaa
    10381 gttgctcctc gccatcaatt ccgaaaagtc gttcgagcgg gatgaagggg atttggattt
    10441 tcggatcttg aataccgact gccatcaaaa tatcattttc ttcttgtaac tgctccaatt
    10501 tcgtatccat ttcatgcaaa ccaatcggaa tcactttaat ggcatctgtc gtaatggtat
    10561 ctaaaatatt ttcgataaac agttgtaatt tttctgcagt accttcgcca gtcgcgcaaa
    10621 tggtaatgat ggcgtgtggt ttttgattgg aatcaagtgt atcgtcatca gaattatagc
    10681 caccataacc tcggaaatct ttcagggaat cgtaaatgct atcgagttcc atgtcgagaa
    10741 tattggattt tcgaactgct tcaataacag ttgcggtgga gaccatatca atcgagcgaa
    10801 ctggaatgcc agtacgttcc gaaatgaccg gagcaaaact tgtaagggag cccatatcga
    10861 ccagaagaag tagaccgcgc cccatatcca tttctttcgc gcgctcggtc aatttatcaa
    10921 gcacgatttt cggactttga tcaagaggca tatcgattcc ttccacgagt ccttcaccga
    10981 gtagtttttt cgcaacacta accatgctac tcgctgtatt attcccatgc gttgcgacga
    11041 gtacggcgac acgagcattt tcttgttctt ttaaaaggga actaatgagt agtgttaaat
    11101 acatgacttc catattagga acccggatgt ggaaagtagc ctcaatatca tccttaattt
    11161 cccgtgataa ttcataggct tccggttgat cattgaccac attttcgata ttcgtatatt
    11221 ttaatggttt gttactttca attcgtttaa taaaagaggt aaggtgaagg ctaaatgcaa
    11281 gcaagaagcg ctcgtttaac tttttaccaa gctgatgttc aattcggagt tcaacacctt
    11341 ccgcaaaatt caggatctct tcattgacga tttttaagat attttcgcga ttgtggatcg
    11401 tatttttaaa cttattgtaa aagctgttaa ggtgaatatc gatatccatc ttgataaatt
    11461 tcttaatatc atcatcttcc acaccttgat ccattaaaat cgatgctttg tcttcaatga
    11521 ttttgtaaag gttgaaattc ggctcatatt cgtccgatgt aatcaacgta ttatttagtt
    11581 cagggaaaat cgtcgtatat ggctccaagt attccgcaat tgcttgaagt tccttgcgac
    11641 ggttactgaa gtggaagaag ccgtctttta tattaatcgg caacgtttta aaatcaatca
    11701 aaatctcttc atctttgtcg aaactattaa ggaaaccttg tgcgcaaacg agttgaatgt
    11761 tggattttaa ttgcccgata tttccataag ttgtattacc aatcagcgct ttggcagctt
    11821 catcttcaat acgaatcggt ttattaactc ggtgcgcctc actagaaagt aagtatttta
    11881 aaagttccac acgttcaaac gccgtacgtt cctccaaact tggcagcgta ataataatcg
    11941 gaatacgacg cataaacgtt ttcaaaagcg aagattccgg attttcggta gtagcaccga
    12001 taattaaaac gttcgatttt cgggttcgat ccgtttcgcc aagtttatta tacgtaccag
    12061 agtccattaa gtaaaaaatc atttcctgac cttcaggagg gagacggtga atttcgtcga
    12121 gaaacaaaat tccaccttcc gctttttcta caagtccacc tttgtcattg tcagcaccgg
    12181 tgaaagcacc tttaacatgc ccaaaaatgt gcgacatcaa aagttgcgga ttattatagt
    12241 aatcggcgca attgaaaata ataaacggcg catcagcagg tagacgtttg gcatgttgcg
    12301 aaaaacgata catcaaatta gcaaaaagtg tcttaccaac accagtttgt ccgagaatca
    12361 ttgtatgtaa accatttggt ggatagagta cagcggcttt ggcctgctcc acaggggttt
    12421 taagactgtc attaacacca attaaatcat caaaagggct tctttcaaca atacttggtt
    12481 tgagcatttt taaaaggggc tcacagctgt caaactccaa ttcattatca gaaagtgtac
    12541 gcccaatttc atcttctacc gcttttttag gaaaataaag cactggtcgg ccaacgattt
    12601 taatgatttt tccttgtctg tgaagttcat tcaattccat actgacatta tttcttaaaa
    12661 tagataatgt ttctgaaata gtactagctg taaaaccttc attcttctct aattgttcgc
    12721 gaatggtttt cgtggaagga ttttctaaaa taaattcata aatacggtca atacgcttca
    12781 tcataaaacc tccatttagt gtatcgatgc acgattagtg tattataaac gattaataca
    12841 ctctggaatt ctgtatttat cttagcatga ctagtgaaaa tgtcaatgtt tatttaccaa
    12901 aaatcaaatt gactagct
//
LOCUS       DASDYO010000090        12857 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.090, whole genome shotgun sequence.
ACCESSION   DASDYO010000090 DASDYO010000000
VERSION     DASDYO010000090.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12857
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.090"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(103..2061)
                     /locus_tag="U0290_002093"
     CDS             complement(103..2061)
                     /locus_tag="U0290_002093"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466255.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2302132.1"
                     /translation="MKLSDITSEPLIFLDKDWRTKEEVFDGLIDALHNQGVLSDKNEF
                     KKAVLEREKISETGLEKGFAIPHGKSKAVKKAAFAFARINQPINSWGSIDPTNEVKYI
                     FLLAIPENEAGSTHLELLAALSKRLLDPAFIESISTAPTVNEFITVLDSEQQEDEKVD
                     YTRKIVAITACAAGIAHTYMAAEALELAGKELGIEVIVEKQGANGIEDRITPEILKGA
                     EAVIFATDITAKDKERFAGMPFIQRRVAEPLRSGKEMIETVLSKPDGYVKADTDGSEQ
                     QFDNNKSSVFSQIYRGILTGISYMLPVIVAGGLMIGIGQLGATAFGLEKVIGNPEYAT
                     NSNQLIVIFHYLGLYGNMIMKFMYPVFGAFLAYSIADRPGLAPGFIGGAFAAGLHYTF
                     WGIDGGIPSGFFGVLILGIIAGFVAKFLNEKIKLHKNLQAMKPMFLIPGITVLVLFFV
                     NYYVVDPVFGGLNAWLQELIIQNQDASAVLLSTIIACLTAFDLGGPVNKAAGAIAIGL
                     AADGIFPLTARVLAIVIPPIGLGLATVLDKYVVKRRVFDENLRVAGTTSIFLGFIAIG
                     EGAIPFMLQNPLITIPINMIGASLGAVTAVLLGAVQWLPLPAIWGWPLVENFWAYAIG
                     LIVGIAFITFANIFVRYGLITRKENKIK"
     gene            2227..2979
                     /locus_tag="U0290_002094"
     CDS             2227..2979
                     /locus_tag="U0290_002094"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466254.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MurR/RpiR family transcriptional regulator"
                     /protein_id="HEM2302133.1"
                     /translation="MSATSLYRLFAPQIEFLSPAEKQVFFYIDNHISTIEKMSLTSLA
                     ESTNVSTTTVIRMCHKLKLSGFSELKFLLHSDKTETKPLSKDYSSTFLEKIRLGIEQL
                     PKKEIEQVATRIAYAPKIYIACLGMTKTLGEYFSKSLVTSKKNVVFTYDSFIIDILPQ
                     IVERDDLIIIISESGGTENTLSLAEHLKYNLSNVIAIVNNPNAQISQYVETIIYASSE
                     EFDEDSFKHHHAPLLIVIDLILNIFEQQKKLI"
     gene            3062..3430
                     /locus_tag="U0290_002095"
     CDS             3062..3430
                     /locus_tag="U0290_002095"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466253.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RpiR family transcriptional regulator"
                     /protein_id="HEM2302134.1"
                     /translation="MKLDGVCKINSALGMEYQFGEFYIDRDYLVFDQDFSLGMKKRQT
                     FPVAKLGHIALVREEEEIMLTFSCDNIEFEINGNSHDNLREFRDLLQNKGTNSAEIQK
                     AESKKKARYTTHHYHNFAKS"
     gene            3444..4055
                     /locus_tag="U0290_002096"
     CDS             3444..4055
                     /locus_tag="U0290_002096"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466252.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2302135.1"
                     /translation="MYKAIIFDVDGTILDTERAVLHSLQAVLAEEGLSYELDELRFVL
                     GITGAAAVEQLNILDPEKVLDKWIEREATFIEEVEVFEGIHKVLHAIPESGVVTSKNA
                     LEMEKGFYPFNIQDHFQAIVCASDTENHKPHPDPLLKGLEILGREPHEVLYVGDSSYD
                     MKCAHAAGAHFGLALWGAKTTDGFEKAELVFEKPEDILAYVSK"
     gene            complement(4098..4502)
                     /locus_tag="U0290_002097"
     CDS             complement(4098..4502)
                     /locus_tag="U0290_002097"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466251.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cupin domain-containing protein"
                     /protein_id="HEM2302136.1"
                     /translation="MTTLENSVIFDKGELITNDYFTGNAYLKMLVPEDTVYNCPIGNV
                     TFEPGARNNWHKHDGGQILLVTGGTGYYQEEGKPAQLLREGDVVTIPKDVKHWHGATK
                     DSWFVHLAISTNVELGGTTWLEPVSNEHYNNL"
     gene            complement(4502..4957)
                     /locus_tag="U0290_002098"
     CDS             complement(4502..4957)
                     /locus_tag="U0290_002098"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003768635.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2302137.1"
                     /translation="MTKNNISFYVVDASEELTMNIKEASEKSGVSADTIRYYERIGLI
                     PPIHRNESGVRKFGAEDLRWILFTRQMRRAGLSIEALIDYLALFREGEHTLEARAELL
                     KKQRIELKNRIDVMQEALDRLDFKIDNYDTHLIPAQEELKDFNVERSNS"
     gene            complement(5042..5923)
                     /locus_tag="U0290_002099"
     CDS             complement(5042..5923)
                     /locus_tag="U0290_002099"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466249.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PucR family transcriptional regulator"
                     /protein_id="HEM2302138.1"
                     /translation="MHIKILKNRYPNIVVSKNPIKSSSDTISFFEEPYYFTIPKSNLS
                     EEEAMLLHTLFPEPLPTFPKESTQFWFDLLFGNKELAMTNEKETYRITQFHIKTTTTK
                     NMLQEWQKALLSFFSPEAELIMFSTNYGVIIEKSTGSLLGEEELIAVAGTLENDFYIQ
                     STFFMGLFHPLNDRLRGLFAEERAIFNHNNREVVQTVASESLKVIALRMKESLITNEL
                     NDLFHQDDTWIPLIHTLFKNQGNISLTAKELFMHRNTIQYRLDKFYEQTNLSLRKMDG
                     LLLAYLSTLQTNNSNHE"
     gene            6093..6542
                     /locus_tag="U0290_002100"
     CDS             6093..6542
                     /locus_tag="U0290_002100"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MarR family transcriptional regulator"
                     /protein_id="HEM2302139.1"
                     /translation="MADRQESLAKAIAIIHRSESTFKNKKLLETGLNIGQLRYLWTLY
                     KEDGISQESMAKRFMVDKASVTRHIKRLEELGMIRREIDAKDRRIQRIFVTETGFQMR
                     DLIEEVTAEWSALLTANFSEKEKDDLMHLIGRLSDNAIIAVEGGESE"
     gene            6539..7891
                     /locus_tag="U0290_002101"
     CDS             6539..7891
                     /locus_tag="U0290_002101"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466247.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MATE family efflux transporter"
                     /protein_id="HEM2302140.1"
                     /translation="MKEQSKRLGEDSIPSLMARLSIPAFIGMFVMGMYNIVDTIFVSY
                     GVGPSGVAALSIAFPVQMILMAMAAMFGIGGASIISRSLGAGEQKQADKVFHQVIWLV
                     LISSIFIAIVTFIFLDPLITLFGAPADIHDIASDFLSLILLGAVFQTFAMAMNNIVRS
                     EGNAKTAMLTMIISAILNMILNPIFIMGFGMGVRGSALATVIAQAVGAIWLLIYFLSG
                     KSTLSLKGFSFRMDFPLIRRIMAIGFPSFIMMSAGSIVTVAVNWMLNIYGGTMAIAVY
                     GIANRIASFVIMPINGVTQGMQPIVGFNYGSRQFERVMKAVKVSMIAATVMSLIAWGL
                     VEIFPGMLVRIFSNDPELIAQGTNAVRFMLLAAPTIGFQIVCGGLYQALGRARISFII
                     SLMRQIICLVPLLLILPQFFGLDGIWYAFPLADLGAFTVCLVIMSKTWRRIFKNPEIV
                     "
     gene            7949..8392
                     /locus_tag="U0290_002102"
     CDS             7949..8392
                     /locus_tag="U0290_002102"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466246.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HEM2302141.1"
                     /translation="MAKMYPYLAFENAKEALGYYEEVFGATNISRLPVSEEQSEMFGL
                     AKENLENTTVHGGFTVLGANLFCSDSFGKEVKPSNQISIMLDSNSEDPAAVADADAFF
                     EKVSSSERVTVTLPFEEQFWGGKMGQFVDEYGISWMIHTQPYSKL"
     gene            complement(8412..8873)
                     /locus_tag="U0290_002103"
     CDS             complement(8412..8873)
                     /locus_tag="U0290_002103"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302142.1"
                     /translation="MEIKQIKAKDTQDIRHRVLRPEQPEENAIYPNDDMEGTFHLGAF
                     EKDVLLGIASFYPEKSTVIMNPAQYRIRGVATERRMRLKGLGTALLADGEAKIWKRGA
                     DIIWCNARIVAVGFYEKHGYRKVGKSFVIPGIGEHYLMKKVNPNKKVDQDN"
     gene            complement(8927..9661)
                     /locus_tag="U0290_002104"
     CDS             complement(8927..9661)
                     /locus_tag="U0290_002104"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466244.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2302143.1"
                     /translation="MEPLFSIGEMAKKSQLSIQRLRYYDKIGLLVPAFTDPTSGYRYY
                     KTAQEEQLNLIQALQYMGFSLQELKQYLDKNTSESLPDLLIKYQQKLMDEEARIARKK
                     WLIDRYQGLLKRETDTTKPLTAVRLLLTEPLLTPVHADILNDPAFHQEVQKTVSRLGL
                     SKSYQQFPGYCILDGQTYLFIELDHSIGAPGERRLLSSERQAFVTPQNWETPPENENY
                     LLQETVAWINQELVRGYSYETKLTFE"
     gene            9741..10460
                     /locus_tag="U0290_002105"
     CDS             9741..10460
                     /locus_tag="U0290_002105"
                     /EC_number="3.5.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466243.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEM2302144.1"
                     /translation="MKIIVEKDYENMSKTTMQLLLGKMYQDKLVHLAITAGSTPKRMY
                     ELIVEEMKEKAPLTNVSYYNFDEIPIGDEKYGVTIANLKAMYFDPAGIPEEQIHMLDT
                     KNYTDHEAHLKAVGGLDAILIGIGEDGHFCGNLPGVTKFGDETRLVSVQSRPDMFDIL
                     LGEVGGDVEKVPEYYVTMGPKSVMHAKEVILFANGKKKAAIIKKALQGPVTEDIPSSI
                     FQLHPNFTVVLDEEAASELNI"
     gene            complement(10502..12079)
                     /locus_tag="U0290_002106"
     CDS             complement(10502..12079)
                     /locus_tag="U0290_002106"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466242.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl--CoA ligase"
                     /protein_id="HEM2302145.1"
                     /translation="MNSENLIAPELYNITDEIAKFSSEKTALIWKNEHNETKNWSYRH
                     LLEQANKFANVVKDAGIKKGDHVIVMTPRLLETYAIYMGLWKAGAIIIPASELLKAHD
                     LEYRIHHANVKAIVSYNGMTAEFDKIESIPSVSKKIIVGEKLSGWDHYETLMEAASTE
                     FERVETSRDDACLLAFTSGTTGNPKGVVHIHGWGYAHIRIAADHWLDIHEDDIVWATA
                     GPGWQKWVWSPFLSVLGKGATGFIYNGRFIPEKQLHLLEEEKINVLCCTPTEYRLMAK
                     VNNLREHDLSSLRSAVSAGEPLNREVIQVFQDNFDIKVRDGYGQTESTLLIGTLVDTP
                     IRPGSMGKPIMPEYMAIIDAEGNPVGVGEIGDIAMRRDFPALFKEYYKEPERLQKAIR
                     GDYFVSGDRAIRDEDNYYWFQGRNDDIIISSGYTIGPFEVEDALTHHPAVKEVAVVAS
                     PDEIRGTVVKAFIVLKDGYEGTEDLVHELQTFTKEQTAPYKYPRRIEFVEALPKTDSG
                     KIRRVELRDAEFASVHG"
     gene            12274..12744
                     /locus_tag="U0290_002107"
     CDS             12274..12744
                     /locus_tag="U0290_002107"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466241.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleoside deaminase"
                     /protein_id="HEM2302146.1"
                     /translation="MERAFFMQQALEEAEKARDIGEVPIGAVVVLDGEIIGRAHNLRE
                     TSQNAVTHAELLAIQDACKHQNSWRLSGAELYVTLEPCPMCSGAILLSRIEKVYYGAK
                     DPKAGTAGSLMNLLQDDRFNHTCEVEAGLMEKESSEMLRSFFQDLRKRNKLNRS"
BASE COUNT         3896 a         2477 c         2601 g         3883 t
ORIGIN      
        1 gtgggaatgt gcgacaacat gtacaatttt attttttttc attttaaaaa cctctcaaat
       61 taagtgacag gtactaacga gagtacctgt cagcctattt ttttatttga ttttattttc
      121 tttacgtgtg attaggccgt agcgtacgaa gatattcgcg aatgtgataa aggcgatacc
      181 tacgattaaa ccaatcgcat aggcccagaa attttcaacg agcggccaac cccaaattgc
      241 tgggagtgga agccattgta ctgcaccaag taaaacggca gtaaccgcac caagagaagc
      301 accaatcata ttaattggaa tagtgataag tggattttgt agcataaacg gtatcgcgcc
      361 ctctcctatg gcaataaacc ctaggaaaat agaggttgta cctgcaacac gtaagttttc
      421 atcaaaaaca cgacgtttaa caacatattt atctaataca gtcgcaagcc caagtccgat
      481 tggcgggata acgattgcta aaacacgagc agttagcggg aaaattccgt ctgctgcgag
      541 tccgattgcg atagctccag ctgctttatt gactggtcca cctaagtcaa atgcagtcaa
      601 acaagcaata attgtcgaaa gtagtacagc acttgcatct tgattttgaa taattagttc
      661 ttgtaaccat gcgtttaagc ccccgaatac cgggtcgacc acatagtaat tgacgaagaa
      721 caagactaaa acggtaatcc ctggaatcag gaacattggt ttcatagctt gtaaattttt
      781 gtgtaattta attttttcgt ttaagaattt agcaacaaat ccggcaatga tacctaaaat
      841 tagaacaccg aagaatccag atggtatacc gccatctatg ccccagaagg tgtaatgtag
      901 ccctgctgcg aaagcaccac cgataaaccc gggagcaagt ccaggacggt cagcaattga
      961 gtaagcaagg aaggcaccga aaacaggata catgaatttc ataatcatat ttccgtataa
     1021 accgagataa tggaagatta caataagctg gttagagttt gttgcatact ctggattacc
     1081 aataactttt tcaagaccaa aggcagttgc gccaagttgg ccaataccaa tcattaaacc
     1141 acctgcgaca ataacaggta acatataaga aataccagtt aaaatcccac gataaatttg
     1201 cgagaaaaca ctgctcttat tattatcaaa ttgttgttct gaaccatctg tatcagcttt
     1261 gacatagcca tctggtttgc ttaatacagt ttcaatcatt tctttaccac tacgaagtgg
     1321 ctcagcgaca cgtctttgga taaagggcat tccggcgaaa cgttctttat cttttgcggt
     1381 aatatctgtc gcgaaaatga ctgcttctgc gcctttaagg atttcaggag taatgcggtc
     1441 ttcaatacca ttcgcacctt gtttttcgac gataacttca ataccaagtt ctttaccagc
     1501 tagttcaagg gcttccgctg ccatatacgt atgggcgata cccgctgcac atgctgtaat
     1561 agcaacgatt tttcgtgtat aatctacttt ttcatcttct tgttgttcag aatctagcac
     1621 ggttataaat tcgtttactg tcggagcggt agaaatgctc tcaataaaag caggatcgag
     1681 taaacgctta cttaaagctg ccaaaagttc taaatgagtt gatccggctt cgttttctgg
     1741 aatagctaat aaaaagatat attttacttc atttgttgga tcaatgctgc cccaagaatt
     1801 aattggttga ttgatacgag caaatgcaaa agcagctttt ttaacagctt tagatttacc
     1861 atgtggaata gcaaaacctt tctctaaacc agtttcagaa atcttttcgc gttctaagac
     1921 agcttttttg aattcatttt tatctgacaa aactccttga ttgtgtaaag catcaattaa
     1981 tccatcaaat acttcttctt tagtgcgcca atctttatct aaaaagatga gtggctccga
     2041 tgtaatatcg cttaatttca atgctatcag ctcctttatt aacagtcttt tccctaggtt
     2101 actttagtta taccatatta tttttttgaa aaagtacgaa aatcgtacaa ttgtacgcag
     2161 tgttgttcat tcgcttttat ttcatgtata ctaaaattaa ttcggatagc catggaggta
     2221 tttattatgt cagctacttc actttatcgc ttgtttgcgc ctcaaattga atttttaagt
     2281 cctgctgaaa aacaagtttt cttctatatt gacaaccata tttctaccat tgaaaaaatg
     2341 tccctcacat ctctagcgga gtcaaccaat gtcagtacca caaccgttat tagaatgtgt
     2401 cataaattaa agctttccgg tttttctgag ctgaaatttt tacttcactc ggataaaaca
     2461 gaaacaaaac ccctttcaaa agactattca tctacatttt tagaaaaaat tcgtttagga
     2521 attgagcaac ttccaaagaa agaaattgag caagtcgcga caagaattgc gtatgcacct
     2581 aaaatctata ttgcttgtct aggcatgacg aaaacattag gagaatattt ttccaaaagt
     2641 cttgttacat cgaaaaagaa tgtagttttc acctatgatt catttattat cgatattttg
     2701 ccacaaattg ttgaaagaga tgatttgatt attattattt ctgaaagcgg tggcaccgaa
     2761 aacacccttt cactcgcgga acatttaaaa tataatttat cgaatgtcat tgcgattgtg
     2821 aataatccca atgcccagat ttcccaatat gtggagacga ttatttatgc ttccagtgag
     2881 gagtttgatg aagattcatt taaacatcat cacgccccac tgttaattgt gattgacttg
     2941 attctaaata tttttgaaca gcaaaaaaaa cttatttaaa atatttttat gaaattgctt
     3001 gacatgaaac ccatttcatc atttaaaact aatatataag gcaatgaagg aggcgaatga
     3061 tatgaaatta gatggggtat gcaagattaa ttcagcactt ggaatggagt atcaattcgg
     3121 agagttttac atcgatagag actatcttgt ttttgaccaa gattttagtt tgggtatgaa
     3181 aaaaagacaa acgtttccag ttgcaaaatt agggcatatt gcgctagttc gagaagaaga
     3241 ggaaatcatg ctaacattta gctgcgataa tattgaattc gaaataaatg gaaattccca
     3301 tgataatttg cgcgaatttc gagatttact tcaaaataaa ggcaccaaca gcgcagaaat
     3361 ccaaaaagcg gaaagtaaga aaaaagcaag atatacaacg caccattatc acaacttcgc
     3421 taaatcttga aggaggaaat tatatgtata aagcaataat ttttgacgta gatggaacaa
     3481 ttctagacac ggagagagct gttttgcatt ctcttcaagc ggttttagcc gaagaaggat
     3541 taagttatga actggacgaa ttacgatttg tccttggaat taccggagca gctgcggtgg
     3601 aacaattaaa cattctggat ccagagaaag tattggataa atggattgaa cgagaagcaa
     3661 ctttcattga agaagtagag gtgttcgaag gcattcataa agtactgcat gccattccag
     3721 aaagcggtgt tgtcacttct aaaaacgcgt tagaaatgga aaaaggtttc tatccgttta
     3781 atattcagga tcattttcaa gcgattgttt gcgcaagtga taccgaaaac cataaacctc
     3841 acccagatcc actgctgaaa gggttagaaa ttcttggaag agagccacat gaagtgcttt
     3901 atgttggtga ttcttcgtac gatatgaaat gtgcccatgc ggccggagct cattttggct
     3961 tagcactttg gggcgcgaag acaacagatg gctttgaaaa agcagaactt gtcttcgaaa
     4021 aaccagaaga tattttagct tatgtaagta aataagtaaa acccgccaac cttgaatgaa
     4081 ggctagcggg ttttttgtta taaattattg taatgctcgt tggaaacagg ttctaaccag
     4141 gtcgttccgc ctaattccac atttgtcgaa atggctaagt ggacaaacca gctatctttc
     4201 gtagcgccgt gccaatgttt cacgtcttta gggattgtta ccacgtcgcc ctctctgagc
     4261 aactgggcag gttttccttc ttcttgatag tagccagttc cgcctgtcac aagtaggatt
     4321 tgtccgccat catgtttatg ccagttgttt ctagctcccg gttcaaacgt aacgttccca
     4381 atcggacaat tgtaaacagt gtcttcaggg acaagcattt ttaaataagc attaccggta
     4441 aagtagtcat tagtaatcag ttcaccttta tcaaaaataa cgctattttc aagtgtagtc
     4501 attatgaatt actcctttca acattaaaat cttttagttc ttcttgagcc ggaatgaggt
     4561 gggtatcgta attgtctatt ttgaagtcaa gtcgatcgag cgcttcttgc ataacatcaa
     4621 tgcgattttt cagctctatg cgttgctttt tcagcaattc ggcgcgagct tccagcgtgt
     4681 gttcgccttc tctgaaaagt gccaagtaat caattaaggc ttcaatagac aaaccagctc
     4741 ggcgcatttg gcgagtaaat aaaatccatc gtaggtcttc tgcgccaaat ttacgaaccc
     4801 cactttcatt acggtggatg ggtggaatta aaccaatgcg ttcatagtag cgaattgtat
     4861 cggcagaaac gccacttttt tcactagctt ctttgatatt catggttaat tcttccgaag
     4921 catctactac ataaaaacta atattatttt tggtcatgac tattctcctt tactgatttt
     4981 ctataatgat tgtattcctt gaagtggact ttaagtcaag cgaaaaagca accatgatca
     5041 tttattcatg attgctatta tttgtttgaa gtgtagataa ataagctaag agcaacccat
     5101 ccatcttgcg gagcgataag tttgtttgct cataaaattt atccaagcga tattgaatgg
     5161 tatttcggtg cataaaaagc tctttagccg tgagactgat gtttccttgg tttttaaata
     5221 atgtgtgaat cagcggaatc caagtatcat cttgatggaa aaggtcgttg agttcattcg
     5281 tgattaaact ttccttcatt cgaagcgcga taacttttaa actttcggaa gccacggtct
     5341 gaactacctc acgattatta tggttgaaaa tggcacgttc ttctgcaaat aaaccacgca
     5401 atcgatcatt taacggatgg aaaagaccca tgaaaaatgt agattgtata tagaaatcat
     5461 tttcaagcgt accggcaacg gcgattagtt cctcttcgcc aagcagcgac cccgttgatt
     5521 tttcaataat aacgccatag ttagtcgaaa acataattaa ctcagcttct ggactgaaaa
     5581 aactcagcaa agccttttgc cactcttgta acatgttttt agttgtagtt gtcttaatat
     5641 gaaactgcgt aatgcgatat gtttctttct catttgtcat cgccaattcc ttgtttccaa
     5701 acaataaatc gaaccaaaat tgggtggatt ctttaggaaa tgttggtaat ggttctggaa
     5761 atagcgtatg taataacatc gcttcttctt ctgaaagatt gcttttagga atagtaaaat
     5821 aatacggttc ttcgaaaaaa gaaatcgtat ctgaactgga ttttattgga ttttttgaaa
     5881 cgactatatt gggatatcta ttttttaata ttttaatatg cacagtggat agcacccctt
     5941 ctctattctt tatttttaca aaagaaagat aggaagtcaa attattgccc gggaaataaa
     6001 aaggttgcgc agtcaactaa aatcctgcta tactataatg gttgacgccg caactaatta
     6061 tgtggcggat ttttttatga ggagtcggat aaatggcaga tagacaggaa agcttagcga
     6121 aagccatcgc aattattcat cgttcagaaa gcacttttaa aaataaaaaa ttactagaaa
     6181 ctggtcttaa tataggtcaa ttacgttatt tatggacgct ttataaagaa gatggtattt
     6241 cccaagaatc tatggctaaa aggtttatgg ttgataaagc aagtgtgaca aggcatatta
     6301 agcgtttgga agaactgggg atgattcgcc gcgaaattga tgcgaaagat agacgtattc
     6361 agcggatttt tgtgacggaa actggttttc agatgcgcga tttaattgaa gaagtgacag
     6421 ccgaatggtc cgcactttta acagcgaatt ttagtgaaaa ggaaaaagat gacttaatgc
     6481 atttgatagg acgactttca gataatgcga ttatagcagt cgaaggagga gaatctgaat
     6541 gaaagaacag agtaaacgat taggtgaaga tagcattcct tcactcatgg cgagattgtc
     6601 gataccggca tttatcggca tgtttgttat ggggatgtat aatattgttg atacgatttt
     6661 cgtgtcatat ggcgttgggc catcaggggt tgcagcactt tcaattgcat tcccagttca
     6721 aatgatacta atggcaatgg cagctatgtt tggtattggt ggcgcgtcga ttatttcccg
     6781 ctcgctcggt gctggggaac aaaaacaagc ggataaagta ttccatcaag ttatttggtt
     6841 agtacttatt tccagcattt ttattgcaat tgtaaccttt atttttttag atccgcttat
     6901 tacgcttttc ggagcaccgg cagatattca tgatattgcc agtgatttct tatcgcttat
     6961 tttgttaggc gcagtgttcc aaaccttcgc tatggcgatg aataatatcg ttcgctcaga
     7021 aggtaatgcg aaaacagcga tgttaaccat gattatttcc gctattttaa atatgatttt
     7081 aaacccaatt ttcattatgg gctttggtat gggcgttcgt ggttctgccc ttgcaactgt
     7141 tattgcgcag gctgttggcg cgatttggct cttgatttat tttttatcag gaaaaagtac
     7201 tttatcttta aaagggttct cattccgaat ggatttcccg ctgattcgcc ggattatggc
     7261 aatcgggttc ccgtcattta ttatgatgtc cgcaggtagt atcgtaacgg ttgcggtaaa
     7321 ctggatgctt aatatttatg gtggaacgat ggcgatcgct gtatacggaa ttgcgaaccg
     7381 gattgcgtcg ttcgtcatta tgccaatcaa tggtgttaca caagggatgc aaccaatcgt
     7441 cggcttcaac tacggttcca gacaattcga acgcgtaatg aaagctgtta aagtatcaat
     7501 gatagctgca actgtcatgt cactaattgc ttggggattg gtagaaattt tcccaggaat
     7561 gctcgtacga attttctcta acgacccaga actgattgca caaggaacaa acgctgttag
     7621 atttatgcta ctagctgcgc caacaattgg tttccaaatt gtctgcggtg ggctatatca
     7681 agcacttggt cgagcaagaa tttcattcat catttcccta atgcgccaaa tcatctgttt
     7741 agtaccactt ttacttattt tgccgcagtt cttcggttta gatggtattt ggtacgcctt
     7801 cccattagca gatttaggcg cgttcaccgt ctgtctagtg attatgagca aaacatggcg
     7861 ccgaattttt aaaaatcccg agatagttta aggtaaaacg aattgggtat tttctaacta
     7921 gtgtctcaaa aataaaggag cgatttttat ggcaaaaatg tacccgtatt tggcttttga
     7981 aaatgcaaaa gaggctttag gatattatga agaagtgttc ggagcaacga atatttcaag
     8041 gcttccagta agtgaggaac aaagcgaaat gtttggctta gcaaaagaaa acctagagaa
     8101 cacaactgtt cacggtggct ttaccgtcct tggcgcaaac ttattttgtt cagattcatt
     8161 tggcaaagaa gtaaaaccat ccaatcaaat ttcgattatg cttgattcta acagtgaaga
     8221 cccagcggca gtagccgacg ccgatgcttt ctttgaaaaa gtgagcagct cagaaagagt
     8281 aacagtaacg ttacctttcg aagagcaatt ttggggcgga aaaatgggac aattcgtcga
     8341 tgagtacgga atttcttgga tgattcatac gcaaccttat tctaaattat aaaaaacaag
     8401 tggaccagat attagttatc ttggtccact tttttatttg gattcacttt tttcattaag
     8461 taatgttcgc cgatgccagg aatgacaaac gatttgccga ctttgcggta gccatgtttt
     8521 tcataaaaac caacagcgac aatccgcgca ttgcaccaaa taatatctgc gccgcgcttc
     8581 caaattttcg cttcaccgtc tgcaagtaaa gctgtgccga ggcctttcaa gcgcatccgg
     8641 cgttctgtcg ccacaccgcg aattcggtac tgggcaggat tcataataac agtcgatttt
     8701 tctggataaa aactggcaat cccaagtaaa acatcttttt caaaagcgcc taaatgaaaa
     8761 gtaccctcca tatcatcatt agggtaaatt gcgttttctt caggctgttc tgggcgaaga
     8821 acccggtgcc taatatcttg cgtgtctttt gctttgattt gcttgatttc cacggcgccc
     8881 acctccacgt tatttctttc tattataacc aatctttcta aaatatctat tcaaaagtta
     8941 attttgtttc ataggaataa ccacgaacca gctcttgatt aatccaagcc accgtttctt
     9001 gtaaaaggta attttcattt tctggaggtg tctcccagtt ttgcggcgtg acaaaagctt
     9061 gccgctcgct tgataacaaa cgccgttcac caggcgcgcc aatagaatga tccaactcaa
     9121 tgaaaagata agtctgcccg tctaaaatac aataaccagg aaactgctga tagcttttcg
     9181 aaagaccaag gcggctcacg gttttctgca cttcttgatg aaaagccggg tcgtttaaaa
     9241 tatccgcatg aacaggcgtt agaagtggct ctgtaagcaa aagtcggacc gcagttagag
     9301 gttttgtcgt gtcagtttcc cgttttaaca aaccttgata acggtcaata agccattttt
     9361 tacgggcaat gcgagcttct tcatccatta atttttgttg gtattttata agcaaatcgg
     9421 gcaagctttc cgatgtgttt ttgtcgaggt attgtttcag ttcttgcaag gaaaacccca
     9481 tatactgcaa cgcttgaatg aggttgagtt gttcttcttg agccgttttg tagtagcgat
     9541 atccagaagt tggatcggta aaagccggga ccaaaagccc aattttatca taatagcgca
     9601 gtcgttggat ggagagttgg cttttctttg ccatttcccc aatggaaaaa agcggttcca
     9661 catttatcac cctttcgtct tgactctata gttactatac actttatcat aaaggtaatt
     9721 caaagcgaga ggtgaaaaaa atgaaaatta ttgtggaaaa agattacgaa aatatgagta
     9781 aaacaacgat gcaactgctt ttagggaaaa tgtatcaaga caagttggtt catttagcca
     9841 tcacagcagg ctccacaccg aagcgaatgt acgaactgat tgtagaagaa atgaaagaaa
     9901 aggcaccact gacaaatgta agctattata attttgacga aattccaatt ggggacgaaa
     9961 aatacggcgt aaccattgcc aatttaaaag cgatgtactt tgatccggcg ggaattccag
    10021 aagaacaaat tcacatgcta gatacgaaaa actatacaga ccatgaagcg catttgaaag
    10081 cagttggcgg tttggacgcg attttaatcg ggattggtga agatggtcac ttctgcggga
    10141 acttacctgg cgtaaccaaa ttcggcgatg aaacccgact tgtttccgtt caatcacgcc
    10201 cagatatgtt cgatattttg ctcggagaag ttggcggcga cgtggaaaaa gtccccgaat
    10261 actacgtaac aatgggacca aaaagcgtca tgcacgcaaa agaagtcatc ctattcgcaa
    10321 atggcaagaa aaaagcagcg attatcaaaa aagccctaca aggcccagtg acagaagaca
    10381 ttccaagctc gattttccag ttacacccta attttacagt ggtgctggac gaggaagcgg
    10441 cgagtgagtt gaatatttaa aagaaaaccc aaccttctat ttaggaaggc tgggtttttg
    10501 attatccatg cacactagca aactccgcat cacgcaactc aacgcggcga attttaccag
    10561 aatcagtttt cggtaatgcc tcaacaaact caatccggcg cggatactta tacggagcgg
    10621 tttgttcttt cgtgaatgtt tgtaattcat gcacaagatc ttccgtgccc tcgtaaccat
    10681 cctttaagac gataaatgct tttacgaccg taccgcggat ttcgtcagga cttgcgacaa
    10741 cagcgacttc ttttacggct ggatgatgtg tgagcgcgtc ctctacttcg aacggtccaa
    10801 tcgtgtaacc agagctaata ataatatcgt cattccggcc ttggaaccag taataattat
    10861 cttcatcgcg gatagcgcgg tcaccagaaa cgaaataatc accgcgaatc gctttttgca
    10921 aacgttctgg ttctttatag tactctttga aaagtgctgg gaaatctcta cgcatcgcga
    10981 tatcaccaat ttcaccgaca ccaactggat ttccttcagc gtcaataatt gccatgtatt
    11041 ctggcataat cggtttaccc atcgaaccag ggcgaatcgg cgtatcaacc agtgtcccaa
    11101 tcaacagtgt actctccgtt tgaccgtagc cgtcgcgaac tttaatatca aaattatctt
    11161 ggaaaacttg aattacttcg cggtttagag gttctcctgc tgatacggcg ctacgaaggg
    11221 aacttaaatc atgttcgcgc aaattattta ctttagccat taagcgatat tctgttggcg
    11281 tacagcacag cacgttgatt ttttcttctt ccagtaaatg aagttgtttt tcaggaatga
    11341 aacgaccgtt gtaaatgaag ccagtggcac cttttccgag tacagaaagg aaaggagacc
    11401 aaacccattt ttgccaacca ggtccggctg tagcccaaac gatatcgtct tcgtgaatat
    11461 cgagccaatg atcagcagcg atacgaatat gcgcgtaacc ccagccgtga atatgtacaa
    11521 cgcctttagg attacctgtt gttccactcg tgaatgcaag cagacaagca tcatcgcgcg
    11581 aagtttccac gcgttcaaat tcggttgaag cggcttccat taatgtttcg tagtgatccc
    11641 agccggataa tttctcccca acaataattt ttttcgaaac agaagggatg ctttcaattt
    11701 tatcaaattc agcagtcatt ccattgtaag aaacgattgc ttttacgttt gcatggtgga
    11761 tgcggtattc taaatcgtgc gctttaagta gctcggatgc cgggatgata atggcaccag
    11821 ctttccataa gcccatgtaa attgcgtacg tttcgagtaa tctaggtgtc atgacgataa
    11881 cgtggtcacc tttttttatg cctgcgtctt tgacaacatt ggcaaattta ttcgcttgtt
    11941 caagcaggtg gcggtaactc caattttttg tttcgttatg ctcatttttc caaattaaag
    12001 cagttttttc agaactgaat ttagcaatct cgtcggtaat attataaagt tctggagcga
    12061 ttaaattttc tgaattcata atgactctcc tttataagta gattgtatat tttgataatt
    12121 ttgttttagg acctagtatt aatatatggt aatataaatg ttccgcgaaa gcaactaaag
    12181 tgttcctgtg aaagtttgag cagattattc ctacatccaa tccaagctat gctaaaataa
    12241 caatgagtga ctttttagaa atgaggtgca tagatggaac gagctttctt tatgcaacaa
    12301 gcgcttgaag aagccgagaa agcacgagat attggagaag ttccaattgg tgcagtcgtt
    12361 gttttagatg gagaaattat tgggcgggcg cataatttgc gtgaaacgag ccaaaatgca
    12421 gtgacccatg cggagttgct tgcgattcaa gatgcgtgta aacatcaaaa ttcatggcga
    12481 cttagcggtg cagaactata cgttacgcta gaaccatgtc cgatgtgtag cggcgccatt
    12541 ttactttcgc ggattgaaaa agtttattac ggagccaaag atccaaaagc gggaacagcc
    12601 ggatcgttaa tgaatttact ccaagatgac cgatttaatc atacgtgtga agtagaagca
    12661 ggattaatgg aaaaagaaag cagcgaaatg ttaagaagtt ttttccaaga tctacgaaaa
    12721 cggaataaat tgaataggtc ttaatgctta ttgtaagaaa tcatactttt aaatctttca
    12781 ttgtgaaata aaaagcaata agccttacca acatttacag ccagataata attgcgaaaa
    12841 atatcacaat ctaacta
//
LOCUS       DASDYO010000091        12727 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.091, whole genome shotgun sequence.
ACCESSION   DASDYO010000091 DASDYO010000000
VERSION     DASDYO010000091.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12727)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12727)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12727
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.091"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..333
                     /locus_tag="U0290_002108"
     CDS             <1..333
                     /locus_tag="U0290_002108"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2'-O-methyl transferase"
                     /protein_id="HEM2302147.1"
                     /translation="KGEKIFGDIGTPIVMIIAALIGTLSSVFLSEEKTKREYEKEKLE
                     KDERYINNRKTFSHYLLIVLALTIPIVLIVLNLNGIEQISISSLTIIFLIFCFSYMIV
                     LEIIRKKV"
     gene            complement(386..685)
                     /locus_tag="U0290_002109"
     CDS             complement(386..685)
                     /locus_tag="U0290_002109"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage repressor protein"
                     /protein_id="HEM2302148.1"
                     /translation="MRSLDAVEILRRGETIERYKEGGNSMLPLIKSMQPVRLEPIGMR
                     ELKVNDIVFCKVRGSFFTHKISKIRGKQYQISNNHKHVNGWITRNSIYGIVTKIW"
     gene            complement(766..1320)
                     /locus_tag="U0290_002110"
     CDS             complement(766..1320)
                     /locus_tag="U0290_002110"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1211 domain-containing protein"
                     /protein_id="HEM2302149.1"
                     /translation="MSKGRLEAFSDGVFAIIITIIVLGMTLPDVFTAASTQAFLWEIF
                     IFIEGGLIIGQFWYSHSRLFDQVTFISTSAVLFNILFLLVLSLIPLFTRAIMQHPDMT
                     APIIGFVMTILITSVIFQLLHHAVYGKDSGIDNWKFRISSFIFVIALGIISFFAPQIS
                     TILFIIFPIAGWIIQLTNRRQPPK"
     gene            1467..2279
                     /locus_tag="U0290_002111"
     CDS             1467..2279
                     /locus_tag="U0290_002111"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAD family hydrolase"
                     /protein_id="HEM2302150.1"
                     /translation="MIRAISVDMDGTFLDGNGEYDRARFEKIYVELMKRGIKFIVASG
                     NQYYQLKSFFPGKDEELFYVAENGAVIFHQGELRSVNRFEERLVQKILRTLIQEYQDL
                     QVILCGVKSAYLLKAADPDFKAFAKKYYFELQELDSFDVLPDDTFIKFALDVEVAKTG
                     QIVEDLNQTFAGEIRAVSSGHGSIDIIIPGVTKGSAIQQLLNEWQVAPDDLLAFGDAN
                     NDIEMLQLTSHSYAMQESSPEVLAAAKHVAPSNKEAGVLQVIEEYMKKSQRP"
     gene            complement(2298..3155)
                     /locus_tag="U0290_002112"
     CDS             complement(2298..3155)
                     /locus_tag="U0290_002112"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463953.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GRP family sugar transporter"
                     /protein_id="HEM2302151.1"
                     /translation="MSIYLIALLPVLGWGFMPIIANLRKSTPEEQLLGTSISALLFAF
                     ILFWILSPEITVLSFIVSFVSGIFWSFGQLLQFKGIAASSVAKAMPISNGTQLVGATL
                     FAVLVFREWQTVTAVIIGVVAVILILIGVVMTGFQKRGNHITESVSFHVYGIVILSSF
                     FLTLYVVTNQLFDVTGFSIILPQAIGMLTCAIGINLAKKTAISRKNVTFNLMTGLSWS
                     IANLGMFLATAVLGVATSFSISQACVIVATIGGILIFKQKKSPLEWTFILSGILLIMV
                     GVVFLSLLK"
     gene            3317..5278
                     /locus_tag="U0290_002113"
     CDS             3317..5278
                     /locus_tag="U0290_002113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2302152.1"
                     /translation="MKAVTKMIANREKNIIQFLMKTGQTRVGTIANHLGLSEKTVSNS
                     LKEIDVFLKDFDMTVVRKPKIGVYIEGDNKAFAEVSRFLDNQVSPIPSTKEERVIYIF
                     SKLLKADDYITIHQLADELYISRSTIEKNMVEVTKMLEKEGITLYKKPSKGMKLLISE
                     REKRALTSKFINNFWGNNWYLKQEGEKVLQAFDTIKADVTGIFPEEGLKEIIAIVQAF
                     SERHDFAFTDYAFQSIVIHLAIAVERIRAGEYIENVESDPMKDVFDSQRNNTEILVSM
                     LEDRLDIKIPAFEVGYIQLHLTAAYNQQHDELLVSVRPKEDDVAEFVSTCLAEGNYDK
                     SLLDDLTTHMKSAINRLKLGMHFKNPYLSKIKQNFPQAFEEALYFKAKFEQKYDVQVN
                     EDETAYIALHFEAYKERSRSFPDQIRVVLVCSTGLGSSRLLAARIKKYFPMITIEKIL
                     SVQALMETEVDVDLVISTIYLELEDIPSIVVSPMMSKADLQQVESQIERTRRKKKKRS
                     QPFVDLIEPKTIFAKLDVATMEDAITQIGDKLVNLGIAQSGIVESALKREALSFTSFE
                     EMATPHADPALINESHIAIATLKNPVKWGLVEVDKIFFIALTEQNGINLDAMYEQFYK
                     YIDNKKWLEKLTQLKSAAEIYEHLLKDGM"
     gene            5278..5742
                     /locus_tag="U0290_002114"
     CDS             5278..5742
                     /locus_tag="U0290_002114"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2302153.1"
                     /translation="MEVKDILTKELVVFDLEATTKEAAIEEMAEMLDEHGILADKATY
                     VRAVLDREAHSTTGIGNNIAIPHGKSESVTKSAIVFARTKEMIEWESLDDEPVNMIFL
                     LAITDSDKTDGHLKILAEIATKLMDDDIVENLKNTRDEEEVIRILNGGVVEI"
     gene            5739..6059
                     /locus_tag="U0290_002115"
     CDS             5739..6059
                     /locus_tag="U0290_002115"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463956.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIB"
                     /protein_id="HEM2302154.1"
                     /translation="MKRKIIAVTACATGVAHTYMAAQALKKGAKKMGNLIKVETQGAT
                     GIENELTEKDVNIGEVVIFAVDTKVRNKERFDGKVVLEVPVSAPIKDAEKVINAALAL
                     IDEK"
     gene            6072..7178
                     /locus_tag="U0290_002116"
     CDS             6072..7178
                     /locus_tag="U0290_002116"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HEM2302155.1"
                     /translation="MFRKIGSELKKHVLTGISYMIPLVIAGAVIMAIARVGGSFFGIT
                     DIWDAKYADSANSLISLLHSLDGFGGLALGMMFPVIAAFIGYSIADKLALAPGLVGGL
                     LARDIGAGFLGALAAGLIAGYTCLLIKKYVKLPKAAASIVPVFLVPVFGTLITVLIIN
                     YVVGIPFADLNTALENWLNGMSGSNQILMAAIIGAMVGFDLGGPVNKAAVTTAMALLT
                     SGIYAPNTAAQVAIIIPPLGLGLATLIAKRKYNTEMREAGKSSLIMGLVGISEGAIPF
                     AVESPLKVIPATVLGSAVGGALAVGLGAINQAPISGFYGWFTVENWPVYILAIAVGTL
                     IVAGMSVALRKASAGEEMAGSSYDDEIDEAEWEA"
     gene            7194..9776
                     /locus_tag="U0290_002117"
     CDS             7194..9776
                     /locus_tag="U0290_002117"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463958.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HEM2302156.1"
                     /translation="MVKAHIVNHTHWDREWYFTSADALVLSEQLFTEVIDELKKHPEA
                     NFVLDGQLSILDDYVALYPEKLADIKQLIADKQLFIGPWFTQTDAFFAHGESILRNAM
                     IGIFDSKKYGDYMEIGYLPDTFGFNAQMPTLLEHAGFDNVIFWRGIHLGEHVASPYFK
                     WQGLGEEASIYAINMPQGYGTGMLLEPTSAYVDGRLDPAIDFIEKYSKTTEVLIPSGN
                     DQLNIISNFAEKLVEINKMGRHDYQLSTYQDFIQYVRELPDLEEYRGEFRSPVLARVH
                     KTIGSSRMNIKLKSASLEQKLLTRIEPLLVIAKASGISISERLLMHTWKKLLEGQAHD
                     SLAGCVSDPVAEDILHRMKEADELCDSIENTIVKKIADDLSLAANEIIVFNTDSHDFD
                     GCKEIQVVTEHKNIHFPAFPDATIVQEEFIPSRENVLEETPAGNRFIEEPGYYVLQVR
                     VKVELPGLGYRVIAFEENDRELDSMIASNDVAITNNFYKITFENGEIALEKPNGERIT
                     SFITLEDDVNAGDTYDYSPLAGDIAELFTFSEVKTEKSSEVERLILTGKSDFPLDRLT
                     KEGHGDLQIKLILEVKKGSELLDVKVEVDNQIKNHRLRLKVNTGVKTDYNIASLPFGY
                     IKRKPVVPANWRETYSEMPIDIEPLEQSVTLTNEAESCTIFTQGIKEYQQLDQYLALT
                     LLATTGQLGKPDLAYRPGRASGDTTKKGHVLIETEGAQLLGKHEFSLAIYLGDQAFDE
                     HKTAERTKAFNQANVSYQRQPFNHFLHRLDNKIQKTERKLGAKQTLGMLNLPKEYLVS
                     ACHPSYYSADKYIIRLENPTNTPQKLALSDMSFEYVNAIEEVVANDNNTIPAYGSVTL
                     RLEI"
     gene            complement(9799..10674)
                     /locus_tag="U0290_002118"
     CDS             complement(9799..10674)
                     /locus_tag="U0290_002118"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463959.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2302157.1"
                     /translation="MELRVLNYFLTVAREKTISRAAEVLHLSQPTLSKQLKELEEELG
                     VTLFIRGNRSITLTEDGLYLANRGKEILSLVELTTSNLLQNETISGKIMIGAAETRGF
                     EFIGSVLHELREKHPDITFQLHSGNADDVLEKIEHGLLDFGLVINPVEKLQYEYLPLN
                     IEDTWGILVNTKHSLAKKAVVTPSDIEANPIVVSNQSFIDNQLASWLGEHFEQLNVIG
                     RYNLLYNASLLAKENIASILCIDGIINTENTNLKFIPFSPPLTAGISIVWKKNQTFSS
                     ASKEFLRLIQKTCSK"
     gene            10792..11361
                     /locus_tag="U0290_002119"
     CDS             10792..11361
                     /locus_tag="U0290_002119"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463960.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar O-acetyltransferase"
                     /protein_id="HEM2302158.1"
                     /translation="MIEQDLQKRLVGQEILQGSDLLDEIHKVKQNNEQLIIELNTKYH
                     SKKEVIKYLSDITGKPVDPSVDVSLPFYSDFGKHITFGKNIFINLNVTFVDLGGITIE
                     DNVLIGPGARLVTVNHLVSPKKRRGLRVAPICVKKNAWIGANATILSGVTIGENAIVA
                     ADATVTRDVPANVIVAGSPAKQIRKIIEE"
     gene            11375..12121
                     /locus_tag="U0290_002120"
     CDS             11375..12121
                     /locus_tag="U0290_002120"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463961.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2302159.1"
                     /translation="MTIKNKVIIITGASSGIGEATALLLAEKGAKVVLAARRVEKLEK
                     IVQTIKASSGEAIFAKTDVTKREDNKKLVELAIETYGKVDAIFLNAGIMPNSPLSALK
                     EDEWEQMVDINIKGVLNGIAAVLPSFIAQKSGHIIATSSVAGLKAYPGGAVYGATKWA
                     VRDLMEVLRMESAQEGTNIRTATIYPAAINTELLETITDKETEQGMTSLYKQYGITPD
                     RIASIVAYAIDQPEDVNVNEFTVGPTSQPW"
     gene            12317..>12727
                     /locus_tag="U0290_002121"
     CDS             12317..>12727
                     /locus_tag="U0290_002121"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725159.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302160.1"
                     /translation="MGYIRVIFDSFIILEKYHTRVGFDGFALVANEAIFKVQQDTQYL
                     KPYQNLNRPQEQIPELSEEGDTLLNFLEWTKKNNKLVEIMTVWDELIIGTIETIEANL
                     VMINTLAPEEFASDGKCFIECDNIVDICIDTARLK"
BASE COUNT         4243 a         2260 c         2701 g         3523 t
ORIGIN      
        1 aaaggggaaa aaatatttgg agatatcggt acaccaattg ttatgattat tgcggcttta
       61 attggtacac tgagttctgt attcttatct gaagaaaaaa cgaagcgaga atatgagaaa
      121 gaaaaactag aaaaagatga aagatatatc aacaatcgca aaacattctc ccattatttg
      181 ctgattgttt tagctttgac gataccaatt gtgttaattg ttcttaattt aaatgggatt
      241 gaacaaatct ccatttcgag tctgacgatt atttttctta tcttctgttt ttcgtatatg
      301 attgttctag aaattatccg aaaaaaagta tgattttagg caaaataaaa aacatccaac
      361 ttgttcgttg catgttacct agcatttacc aaattttggt gacaatgcca taaatactat
      421 tacgtgtaat ccaaccattc acgtgtttgt gattattaga aatttgatat tgtttaccgc
      481 ggattttact gattttatgt gtaaaaaaac taccgcgaac tttgcaaaat acgatatcgt
      541 tgactttgag ttctctcatg ccaatcggtt ctaaacgaac aggttgcatc gatttaatca
      601 aaggtaacat cgaatttccg ccttctttat aacgctcaat ggtttcgcca cgtctgagta
      661 tttctactgc atccaggctt ctcataatta tgctcctttc ttgttgttag tgccagaata
      721 acaaaatagt aaagcgaagt caacgaaatt tttcgctgac tttttttatt ttggaggctg
      781 acggcggttt gtgagttgaa taatccaacc agcgattggg aaaataataa ataaaatggt
      841 ggatatttgt ggagcgaaga aactgataat accaagtgca ataacaaata tgaaactaga
      901 gattcgaaac ttccaattgt cgatacctga atcttttcca tatacagcgt gatgcaataa
      961 ttggaatatc accgaagtaa tcaaaatagt cataacaaat ccaataatcg gtgcggtcat
     1021 atctggatgt tgcatgattg ctcttgtaaa taatgggata agtgacaaaa ctaataaaaa
     1081 taaaatatta aataagacgg cagatgtgga aatgaatgtg acttgatcaa acagcctgct
     1141 atgtgaatac caaaattgtc cgataattaa tccgccttcg ataaatataa aaatttccca
     1201 taagaaagcc tgtgtgctag ccgcggtaaa tacgtctggt aaggtcattc ctaaaacaat
     1261 gattgtaatt ataattgcaa aaacaccatc actaaatgct tctaatcttc cttttgacaa
     1321 ggtttgggcc ctcctttcgt gtcttgttat ttatgatatg ggctagttta gtatagcata
     1381 ttttataatt aaacaagctg tagcaatgtg gcgcgaaaaa atttggtata atagaataaa
     1441 attaacttta aaaggagctt aaacggatga ttagagcgat ttctgtagat atggacggga
     1501 cttttttaga tggaaatggt gaatatgatc gtgctagatt tgagaagatt tatgttgaat
     1561 taatgaagcg tgggattaaa tttattgttg cgagtgggaa tcaatattat cagcttaaat
     1621 ctttttttcc agggaaggat gaggagcttt tttatgttgc tgaaaatggg gcggttattt
     1681 ttcatcaagg ggaacttcgg agtgtgaatc gttttgagga aagattagtt caaaagattt
     1741 tgcggacgtt gattcaagaa tatcaagatt tgcaagtgat tctttgtggg gtgaagagtg
     1801 cgtatttatt aaaagccgcc gatcccgatt ttaaagcatt tgcgaaaaag tattattttg
     1861 agttgcaaga gttggattcg ttcgatgtac ttccggatga tacgtttatt aagttcgcgc
     1921 ttgatgtgga agtggctaag acagggcaaa ttgtggaaga tttgaatcaa acgtttgccg
     1981 gtgaaattcg cgctgtgtcg agcgggcatg gaagtattga tattataatt ccgggtgtga
     2041 cgaaagggag cgcgattcag caactattga atgaatggca agtggcgcca gatgatttac
     2101 tcgcttttgg tgatgcgaat aatgatatcg aaatgttgca attaacgtcg catagttacg
     2161 caatgcaaga aagcagtccg gaagttcttg ctgctgcgaa acatgtggct ccttctaata
     2221 aagaagcggg cgtgttacaa gttatagaag agtatatgaa aaaaagccaa agaccttgag
     2281 gtggtctttg gcttttttta tttcaataaa ctaaggaaca cgacgcccac cattattaac
     2341 agtatgccag aaaggataaa agtccattct agcgggcttt ttttctgttt gaaaatgagg
     2401 ataccgccga ttgttgcgac gataacgcaa gcttgtgaaa tcgagaagct cgttgcgaca
     2461 ccaagtacag cagtcgctaa gaacatgcct aaattggcga tggaccacga taatccggtc
     2521 attaagttga atgtaacatt ttttcgggaa atagcagtct ttttcgctaa gttaatacca
     2581 atggcgcatg tcagcatacc gattgcttgt ggtaaaatga tagaaaagcc agtgacatca
     2641 aaaagctggt ttgtcactac gtaaagcgtt aaaaagaacg aagatagaat aacgataccg
     2701 tagacatgaa atgaaaccga ctccgtgata tgattcccgc gtttttgaaa cccggtcatt
     2761 accaccccaa tcaagattaa aattactgca acaactccga taataacagc cgtaaccgtt
     2821 tgccattccc ggaaaacaag aacggcaaaa agcgttgcgc caacgagttg tgtaccgttt
     2881 gaaatcggca ttgccttcgc gacactagaa gccgcaatcc ctttaaactg tagtaattgc
     2941 ccaaaactcc aaaagatacc cgaaacaaaa ctcactataa aagaaagaac cgttatttct
     3001 ggtgataaaa tccagaacaa aatgaaagca aataatagcg cgctaatcga agtccccagt
     3061 agttgttcct cgggggtgct ttttcgtaag ttcgcaatta tcggcataaa tccccaccca
     3121 agaacaggga gtaacgcaat aagataaata gacataaaat aagcttcctt tctaggttag
     3181 tggtgctatt taaatctacc attctccaaa atgaacagca atatcccaaa attacggtat
     3241 tcaatgcggt aattttcgta gttttctggg gatgagtctt tgtaatagaa taagcgtagg
     3301 gaaaggaaaa ttaaaaatga aagcggtaac gaaaatgatt gcaaatcgcg aaaaaaatat
     3361 cattcagttt ctaatgaaga caggtcaaac acgtgttgga actatcgcga atcatctcgg
     3421 actttcagaa aaaactgttt caaattcact gaaggaaatc gatgtttttc taaaggattt
     3481 tgatatgaca gtggtccgta aaccaaaaat cggtgtgtat attgagggtg ataacaaggc
     3541 ttttgccgaa gttagccgat ttctagataa ccaagtcagc ccaatcccat caacgaaaga
     3601 agagcgggtt atctacattt tcagtaaatt gcttaaagca gacgactata tcacgattca
     3661 tcagcttgca gacgaacttt acattagccg gagcacgatt gagaaaaata tggttgaagt
     3721 tacgaaaatg ctggaaaaag aaggtattac tttgtataag aaacctagta agggcatgaa
     3781 actccttatt agtgaacgag aaaagcgcgc cttaacatcg aaatttatta ataatttttg
     3841 gggcaataat tggtatttaa agcaagaagg cgaaaaggtc ctccaagctt ttgacacgat
     3901 taaagccgat gtcaccggaa tttttccaga agagggcttg aaagaaatca ttgcgattgt
     3961 tcaagcattt agtgagcgac atgattttgc ttttactgat tatgcgtttc aatcgattgt
     4021 cattcacctt gcgattgcgg tagagcgtat tcgagcagga gagtatatcg aaaatgttga
     4081 gagcgatcca atgaaagatg tatttgattc gcagcgaaac aatacggaaa tcctcgttag
     4141 catgctagaa gaccgtttgg atattaaaat tccagcattt gaagtcggct atattcagtt
     4201 gcatttaaca gcagcatata accaacagca tgatgagtta cttgtaagcg ttcgaccaaa
     4261 agaagacgat gtggcagaat ttgtcagcac gtgtttagcg gaagggaatt acgataaaag
     4321 cttactggat gacttgacga cacacatgaa atccgccatt aaccggttaa aacttggtat
     4381 gcattttaaa aatccgtacc ttagcaaaat taagcaaaac tttccccaag cgtttgaaga
     4441 agcgctatat tttaaagcaa aatttgaaca aaagtacgat gtgcaagtga acgaagatga
     4501 gacggcgtat atcgcgctac attttgaggc atacaaagaa agaagtcgtt ctttccccga
     4561 ccaaattcga gttgtacttg tatgcagtac cgggcttggt tcatcaagat tacttgcggc
     4621 gagaattaaa aaatattttc caatgattac gattgaaaaa atattatccg ttcaggcgtt
     4681 aatggaaaca gaagtcgatg tggatttagt catcagcacg atttatctcg aactggaaga
     4741 tattccaagt attgttgtca gtccgatgat gagtaaagcc gatttacaac aagttgaaag
     4801 ccaaatcgaa cgaacgagac gcaagaaaaa gaaacgcagc caaccatttg ttgacttgat
     4861 tgaaccgaaa actatttttg cgaagctaga tgttgcaacg atggaagacg caatcacgca
     4921 aattggtgat aagcttgtga atcttggtat tgctcaatca gggattgttg aaagtgcgct
     4981 aaaaagagaa gcgttatcgt tcacttcttt tgaagaaatg gcgacaccac acgcagatcc
     5041 tgcacttatt aatgaatcgc acatcgctat tgccacactt aaaaatccag tgaaatgggg
     5101 cttagtcgag gtggataaaa tcttttttat cgctctgacc gaacaaaatg gcattaattt
     5161 agacgcgatg tatgaacagt tttataaata tattgataat aaaaaatggc ttgagaagct
     5221 gacacaacta aaaagtgccg cagaaattta tgagcatttg ttaaaggatg ggatgtaatg
     5281 gaagtaaaag atattttaac aaaagaatta gtcgtctttg atttagaggc gacgacaaaa
     5341 gaagcagcaa ttgaagaaat ggcagaaatg ctagatgaac atggtatttt agcggataaa
     5401 gcgacttatg ttcgggcagt tttggatcgc gaagcacatt caacaactgg aataggaaat
     5461 aacattgcta tcccacacgg aaaaagtgaa agtgtcacaa aatcggccat cgtttttgca
     5521 agaacgaaag aaatgattga gtgggaatca ctggatgacg aaccggtaaa tatgattttc
     5581 ttactggcga ttactgattc tgacaaaaca gacggtcact taaaaatcct tgcagaaatt
     5641 gcaacgaaac taatggacga tgatattgtc gaaaatttaa aaaatacaag agacgaagaa
     5701 gaagttattc gaattttaaa tggaggcgta gtagagatat gaaacgtaaa attatcgcag
     5761 taaccgcatg tgcgacagga gtggcgcaca catatatggc agcacaagca cttaaaaaag
     5821 gcgcgaaaaa aatgggcaat cttatcaaag tagaaacaca aggcgcgaca ggaattgaga
     5881 atgaattaac cgaaaaagat gtaaatatcg gcgaagtagt tattttcgca gtagatacaa
     5941 aagttcgtaa caaagaacgt tttgatggta aagtcgtgct ggaagttcca gtaagcgcac
     6001 cgattaaaga tgcagaaaaa gtaatcaacg cagcacttgc gttaattgac gaaaaataag
     6061 gaggatctac catgttcaga aaaattggga gtgaactgaa aaaacacgtt ttaacaggta
     6121 tttcatatat gattccgctc gttattgcag gcgccgtgat tatggcgatt gctcgggttg
     6181 gtggttcgtt tttcggaatt acagatattt gggatgcgaa atacgcagac agtgcgaata
     6241 gtttaatttc actactgcat agtttagatg gttttggtgg cttggcgcta ggaatgatgt
     6301 tcccggttat tgcagcattt atcgggtatt cgattgcgga caaattagca ctagcacctg
     6361 gtcttgttgg tggtttactg gcacgtgata ttggcgctgg tttcctcggg gcactggcag
     6421 ctggtttaat cgctggttac acatgtctat tgattaaaaa atacgtgaaa ctgccaaaag
     6481 cggcggcttc gattgtaccg gtatttttag taccagtttt tggcacactt attaccgttc
     6541 ttattattaa ttatgtggtt ggtattcctt ttgctgactt aaatacagcc cttgaaaatt
     6601 ggctaaatgg tatgtctgga tcgaatcaaa ttctaatggc ggctattatc ggagcaatgg
     6661 ttggttttga cttaggcgga cctgtaaata aagcagctgt aacaacggcg atggcacttt
     6721 taacaagtgg aatttatgca ccaaatacag cagcacaagt agcaatcatc atcccaccac
     6781 ttggtcttgg tttagcaacc ttaatcgcaa aacgtaaata taatactgaa atgcgtgagg
     6841 caggaaaatc ttctcttatc atgggacttg ttgggattag tgaaggggca attcctttcg
     6901 cggtagaatc tccgcttaaa gttattccgg ctacggttct tggttctgct gtcggcgggg
     6961 cactagctgt aggtcttggc gcaattaacc aagcgccaat cagtggtttt tatggctggt
     7021 tcacagtaga aaattggcca gtttatattt tagcgattgc cgttggaacg ctaatcgttg
     7081 cgggtatgtc agtcgcttta cgtaaagcaa gtgctggcga ggaaatggct ggttcaagct
     7141 acgatgacga aattgacgaa gcagaatggg aagcttaaaa aacggaggta actatggtta
     7201 aagcacatat tgtgaaccat acgcattggg accgagagtg gtattttacc tcggccgatg
     7261 cactggttct aagtgaacaa ctttttacag aagtaattga cgaattaaaa aagcacccag
     7321 aagcaaactt tgtacttgat gggcaactgt cgattttaga tgattatgtc gcactgtacc
     7381 cggaaaaatt agcggatatt aagcaattaa ttgcggataa acaacttttc attggaccgt
     7441 ggtttacgca aacagatgcc tttttcgcgc atggtgagtc gattttgcgc aatgcgatga
     7501 ttgggatttt tgatagtaaa aaatacggcg actatatgga aattggttat ttgccagata
     7561 catttggttt taatgcccaa atgccgactt tacttgaaca tgctggcttt gataatgtga
     7621 ttttctggcg tgggattcat cttggtgaac atgttgcgtc tccatatttt aaatggcaag
     7681 gacttggaga agaagcgtcg atttatgcga ttaatatgcc acaaggttac ggcacaggga
     7741 tgctccttga accaacctcg gcatatgtgg atggacgcct cgacccggca attgatttca
     7801 ttgaaaagta cagtaaaaca actgaagttt taattccatc tgggaatgat cagctgaata
     7861 ttattagtaa ctttgccgaa aaattagtgg aaatcaacaa gatgggacgc catgattatc
     7921 aacttagtac ctatcaagat tttattcaat atgttagaga gctgcctgac ttagaagaat
     7981 atcgcggcga atttagaagt ccggttcttg cgcgagtgca taaaaccatt ggatctagcc
     8041 gaatgaatat taagctaaaa agcgcgtcac tcgagcaaaa attgctaaca cgtattgagc
     8101 cacttcttgt tattgctaaa gcatctggaa tttctattag cgagcgttta ctaatgcata
     8161 cgtggaagaa acttttagaa ggtcaagcgc atgatagctt ggcgggctgc gtttctgatc
     8221 cagttgccga agatattttg caccggatga aagaagccga cgaactatgc gatagtatcg
     8281 aaaacacgat tgtgaagaaa attgccgatg atttgtcact tgcggcgaac gaaattatcg
     8341 tttttaacac ggattcacat gattttgacg gatgtaagga aatacaagta gtaaccgagc
     8401 ataaaaacat ccatttccca gcgtttccgg acgcaacgat tgtccaagaa gagttcattc
     8461 catcgcgcga aaatgtgcta gaagaaacgc cagctggaaa ccgatttatt gaagaaccgg
     8521 gctactatgt gcttcaagtg cgcgtcaaag tggagcttcc aggccttggt taccgcgtga
     8581 ttgcttttga agagaatgac cgcgaactgg attcgatgat tgcttccaat gatgtggcaa
     8641 tcacgaataa tttctacaaa atcacttttg aaaatggcga aattgctctt gaaaaaccaa
     8701 acggcgagcg catcacttct tttattacac tagaagatga tgtgaatgcg ggagatacgt
     8761 atgattattc accactagcc ggagatatcg cggaattatt cactttttcc gaagtgaaaa
     8821 cggagaaatc aagcgaagtc gaacgtttaa ttttaacagg aaaaagcgat ttcccacttg
     8881 atcgtttgac gaaagaaggg catggcgacc tgcaaatcaa actcatttta gaggtgaaaa
     8941 aaggtagcga actgctggat gttaaagttg aagtagataa ccaaattaaa aatcaccgtc
     9001 tacgcttaaa agtaaacaca ggtgtgaaaa cagactacaa catcgcttca cttccattcg
     9061 gatatatcaa gagaaaacca gttgtaccag cgaattggcg agaaacatat agcgaaatgc
     9121 caatcgacat cgaaccactt gaacaaagcg tgacgctaac aaatgaagca gaaagttgta
     9181 ccattttcac acagggcatc aaagaatacc aacaattgga tcaatattta gcactgacgc
     9241 tactggcaac aaccggacaa ctcggaaaac ctgatttagc ataccggcca ggccgagcat
     9301 caggcgacac aacgaaaaaa ggtcacgtgc tcatagaaac agaaggcgcg cagttacttg
     9361 gtaaacatga attttcatta gccatctatc ttggcgacca agctttcgac gaacataaaa
     9421 ccgctgaacg aacaaaagcg ttcaaccaag caaacgtgtc ttaccagcgt caaccattca
     9481 accacttttt acatcgcttg gataacaaaa tccagaaaac agaacggaaa ttaggcgcga
     9541 agcaaacgtt aggtatgttg aatttgccga aagaatactt agtttcagcg tgccacccgt
     9601 cctactactc agcagataaa tacattatcc gcctggaaaa cccaactaac acaccacaaa
     9661 agttggcact ctcggatatg tcgtttgagt atgtgaatgc tatcgaagaa gttgttgcaa
     9721 atgacaacaa cacgattcca gcatatggct ctgttacgtt acgattagaa atatagaaag
     9781 aaaacttgct caaagtattt attttgagca agttttttgt attaatcgta aaaattcctt
     9841 cgaagcactg gagaaagttt gattcttctt ccacacaata ctaattccag cagttagagg
     9901 cggcgaaaaa gggataaact tcaggttagt attttccgta ttgataatac catcaataca
     9961 aagaatactt gcgatgttct ccttagcgag caaagaggca ttatacagta aattatatct
    10021 accaattaca ttcaattgtt caaaatgctc tccaagccaa ctagctagct gattatcaat
    10081 gaaagattgg ttggaaacga caatcggatt agcttcaata tcactaggag ttacaaccgc
    10141 ttttttcgct aaagaatgtt ttgtattgac taaaattccc caagtatctt ctatattaag
    10201 tggtaaatat tcatattgta gtttttccac aggattaatt accaaaccaa aatctagtaa
    10261 accgtgctca attttttcta aaacatcatc cgcattgccg ctatgcaatt gaaaagtaat
    10321 gtcgggatgc ttctctctaa gttcatgtaa cacgctaccg ataaattcaa atcctctcgt
    10381 ttcagcagca ccaatcatta tttttccgct aatcgtctca ttttgaagta aattcgaagt
    10441 agttaactcc actaaagata aaatttcttt cccgcgatta gctaaataaa gcccatcctc
    10501 tgttaacgta atggaccgat ttccacgaat aaataaagtt acccctagtt cttcctcaag
    10561 ttccttcaat tgtttagaaa gcgttggctg agaaagatga agcacttccg cagctctact
    10621 aatcgttttt tcacgagcaa cagttaaaaa ataattcaac acacgaagct ccattaaaat
    10681 caccctttcc tataactaaa atgaatagtt ggatatgttt tataagtatt attcaattat
    10741 aacttctccc gctataatta aatagtaaaa gattttcgag ggggaaagcg catgatagaa
    10801 caagatttac agaaaagact agtcggccaa gaaattctcc aagggtcgga tttgttagat
    10861 gaaattcaca aagtaaagca aaacaatgaa caacttatca tcgaactaaa caccaagtac
    10921 cactcaaaaa aagaagtgat taaatatctc agtgacatca ctggaaaacc agtcgatcca
    10981 tcagtcgatg tctcacttcc tttttatagc gacttcggga aacatattac ttttgggaaa
    11041 aatatcttta tcaatttaaa tgtaactttc gtggatttgg gtgggattac aattgaagat
    11101 aatgttttaa ttggcccagg agcaagactt gtgaccgtca accatttagt tagcccgaaa
    11161 aaaagacgtg gcttaagagt agccccaatt tgtgtgaaga aaaacgcctg gattggcgca
    11221 aacgcaacga tattatcagg cgtaacaatc ggcgaaaatg ctatcgttgc tgcggatgct
    11281 accgtcacaa gagatgtccc agcaaacgtt atcgtcgccg gaagcccagc caaacaaatt
    11341 cgtaaaatta tcgaggaata aggagagata gcaaatgaca atcaaaaata aagtaattat
    11401 tataaccgga gcatcatccg gaattggtga agcaacagcc ttacttttag ctgaaaaagg
    11461 ggcgaaagtg gttcttgctg ctcgtcgcgt agaaaagctg gaaaaaattg ttcaaacgat
    11521 taaagcgagt tcaggcgaag caatttttgc caaaacggat gtgacaaaac gcgaagacaa
    11581 taagaaatta gtagaattag cgattgaaac atacggaaaa gtagatgcaa tctttttaaa
    11641 tgcgggaatc atgccgaatt cgccattatc tgctttaaaa gaagacgaat gggagcaaat
    11701 ggttgatatc aatattaaag gcgtactgaa tggaattgcc gcagttttgc cttctttcat
    11761 cgctcaaaaa tcaggacata tcatcgccac ttcttctgta gcaggattaa aagcatatcc
    11821 cggcggcgca gtatatggcg cgactaaatg ggcagtccgt gacttaatgg aagtattacg
    11881 gatggagtca gcgcaagaag gaaccaatat ccgcacagcg accatttatc cagcagctat
    11941 caatacggaa ttactagaaa caatcacgga taaagaaacc gaacaaggaa tgacgagctt
    12001 atacaaacaa tacggcatca cacctgatcg tatcgcgagc attgttgcgt atgctatcga
    12061 tcaacccgaa gacgtcaacg taaatgaatt cacagtaggt ccaaccagcc aaccgtggta
    12121 aatggaaaag ccttgaacgg attgattatt cgttcaaggc tttttttgta ttgcaggaga
    12181 ggattaaaca tggtatctta aattgaaagc gcttaaaaaa gaggtgaacc aatgaaatcg
    12241 taaacaatta gaacaactaa accaaaagtg cctttatgaa gtatatgatg atgagcaaca
    12301 aacaaatgat tttcgtgtgg gatatatcag agttattttt gattcgttca ttatattgga
    12361 aaaataccat actagagtgg gatttgatgg ttttgcactc gtagcaaatg aagctatttt
    12421 taaagttcaa caagatactc aatatctgaa gccgtatcaa aatttaaacc gacctcagga
    12481 acaaatacct gaattaagtg aggaaggcga cacactattg aattttctgg aatggacgaa
    12541 aaagaacaac aaattagtgg aaataatgac tgtttgggat gagctaatta tcgggacaat
    12601 agaaacgatt gaagcaaatt tagtaatgat taataccctt gcaccagaag aatttgcatc
    12661 tgatgggaaa tgctttatag aatgcgacaa tattgttgat atttgtattg atacagcgcg
    12721 actgaaa
//
LOCUS       DASDYO010000092        12631 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.092, whole genome shotgun sequence.
ACCESSION   DASDYO010000092 DASDYO010000000
VERSION     DASDYO010000092.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12631
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.092"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(109..1659)
                     /locus_tag="U0290_002122"
     CDS             complement(109..1659)
                     /locus_tag="U0290_002122"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydantoinase/oxoprolinase family protein"
                     /protein_id="HEM2302161.1"
                     /translation="MYKIGIDVGGTNTDAVILDENQQLIHSVKMPTSEDIETGITESL
                     HRVLSETGIDRSKVTHAMLGTTQCTNAIVERKKLAKVGVLRLGYPATASVLPYTAWPE
                     DMVGFLSGKYKLTGGGYEYDGQVLSEINEAEIRETLASWKGEVESVAVVGVFSSLKND
                     QELAVQKIIEEELGADIPVSISSSVGSVGLIERENATILNAALFKVIAATSDGFEKAL
                     EQEGIAHAEIYLCQNDGTLMSLNYARQFPILTIACGPTNSIRGASYLAGLKDAMVLDV
                     GGTTSDIGVLTDGFPRESSLAVDVGGVRTNFRMPDIISIGLGGGSLVREKDGDITIGP
                     DSVGYRISEEALVFGGKTMTTTDIAVRLGRAEIGNPELVAHIPTDFAEKAYKKIAEMT
                     EDAIDKMKTSSGSVSLVLVGGGSVIIPDEISGVAQIFRDKNGPVANAIGASISQISGQ
                     YEQIYIYSQIEREEALQDAEQKAREQATLAGAVTDSIEVVEVEEIPLAYHPGNATRLR
                     VKVVGNLV"
     gene            complement(1652..2752)
                     /locus_tag="U0290_002123"
     CDS             complement(1652..2752)
                     /locus_tag="U0290_002123"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF917 domain-containing protein"
                     /protein_id="HEM2302162.1"
                     /translation="MRYLDEQAIENIAIGAAFLGTGGGGDPYIGKMMALTAIKKHGPI
                     KLLSPEEIADDDYFIPAAMMGAPSVLIEKFPKGDEFVRVFEKLGRYVGKEVKGTFPME
                     AGGVNSMIPIVVAAQLGLPMVDCDGMGRAFPELQMVTFHLDGISATPMAITDEKGNIG
                     IMETIDNKWTERLARVTTVEMGASSLVSLYPCNGAQIKQSSIKNIVTLSEEIGKVIRE
                     TSMDEAEKLQKLLDVTHGYHLFEGKITDVVRETRAGFNFGRVKIDGLNKDTGSEVIVH
                     FQNENLVAEKNGEPIAITPDLICMVDLETLMPVTTEALKYGKRVRVMALPADDAWRTD
                     KGIETVGPRYFGYDVNFEPLEELVKKEERRHV"
     gene            complement(2753..4036)
                     /locus_tag="U0290_002124"
     CDS             complement(2753..4036)
                     /locus_tag="U0290_002124"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cytosine permease"
                     /protein_id="HEM2302163.1"
                     /translation="MTEKKSVEQTQSWQSLAFVWTGAMICVPSLLVGGTLISGMPLWE
                     AILIALLGYGVIVLFMIYQGMQSSDLGIPAVSVASQVFGEQGSKKIISILLAIACLGW
                     FGIQANVCGAAFSQFLGIYGINLPVPVSSLIWGVIMLLSAIYGIRILSILNYIAVPVL
                     LFVCIYGLVVSLNDGGLAIVENYKPAGSMSFMTGLAITIGSFALGAVIAGDYSQYTKS
                     RKDVVKAAIVGILPSGVLMITVGAVLALTAGTADISVVFTNLGLPVLGIIGLILAAWT
                     TNAVNAFSGGIAIINVFNISEKYHKVAVAVAGGLGTILAVIGILNHFVPIMSVLSAMV
                     PPVAGVMIASYWIVQKGDKSKWAPVPGVNWLGVSSWLVGAVIAGIPVILTFFPELPQL
                     PNQPLIGIILSLAVYLIGAKVLSGKTNNVENLEGK"
     gene            complement(4170..5765)
                     /locus_tag="U0290_002125"
     CDS             complement(4170..5765)
                     /locus_tag="U0290_002125"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PucR family transcriptional regulator"
                     /protein_id="HEM2302164.1"
                     /translation="MSVKLADLMKLPSLKEAKVVSGKSGLSKLVSSISVLEYTEVALL
                     EDDLFDNDEFYGSEIVVSAFVNIRDDVEAQCRTIERLHKVGEVALILYYVGIFVPKMD
                     QKLIDFANELDFTIIVMPENEMSLRYSEVIYEVVEAIVKQEMTDTNFVTESLEQISSV
                     RPPQRNIDTTLKILSDRTHTSLVLTDNSFQVINSITWPRTRHWDFERIIEASKQIGEH
                     ELVQLTLDERDFYTARKPIFQDGMQAMHLFMMKEKGVLTADVVMQITEVVQVFMNLWG
                     RNYVEISTAELMKAILNDESVKMRRLGKILNVDVSSIKWMWLVKTEEIRDNEQVLAEL
                     KSFVASHFQVSLIDLFEDNIVVLLDNSVAQRDRTHTANEFAMMMKEHGIDLKITVCQG
                     MEQTSDVQSAYSLVNEYKNAANAIYANKSIYSLQEIDFAAKCVEIVDRGELAIAEQMR
                     PLKPLEDNDELIETLSVFLLEGESNYNQAAELLFLHKNTIKYRIQRINELLQYPATKI
                     PESYNLYLAVAIRRILGGNNNNK"
     gene            5921..6868
                     /locus_tag="U0290_002126"
     CDS             5921..6868
                     /locus_tag="U0290_002126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MoxR family ATPase"
                     /protein_id="HEM2302165.1"
                     /translation="MSIEPSIKIEEIINEVEKVIVGKRHVVKLSLTALLAGGHVLLED
                     VPGVGKTMMVRTLSKTIGVSFKRIQFTPDLLPADVTGVSIFNPETRDFEFRPGPVMGN
                     IVLADEINRTAPRTQAALLEGMAENSVTVDGITRKLANPFFVMATQNPIEYEGTYALP
                     EAQLDRFLLKINIGYPTVEEEMQLLTLKQYQDPLDQTQQVVTLSELLDLKNKAKQVFI
                     DDVLKNYIIRLVDATRKHPSVALGISPRGSLAFMQAAQAFALIEGRDYVIPDDIQYLA
                     PYIFTHRLILKSEAYYNEETAESIIASILKNTSVPVEKR"
     gene            6873..8021
                     /locus_tag="U0290_002127"
     CDS             6873..8021
                     /locus_tag="U0290_002127"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF58 domain-containing protein"
                     /protein_id="HEM2302166.1"
                     /translation="MLKKRLLLAFRWIIMLIIYAGLWTYTLFQGDTASWFLTYFFSFI
                     LLLLFLSSIYPLKAWKVNRRFVKNTYHDGDLIDMQVSFTRKSRYPVGYLLFQQKIPAS
                     FGNVSARQQVVYPLFKKHFTVTLAGFVGVRGIHSFPPVDVETSDAFGLLERSRQLSSE
                     KSLTIYPTYFPDVLEKISEASPENERNAAYWTLKKNSNLHSLREFSSGDRISLIDWKS
                     SAKSDQLMTREFENSATSRLSVIFYGASHPNFELSLRAAYSFIRKISEDNGEIRVTLL
                     GDQTSKFAPAKGTSKLQDISTAFAEIAPVDNLTLQESLDSNLHSGEKILLFTPCIDTM
                     LMQKVTRLTDNKQLQIITFQSEHSKSMDAPAIFLEPASLLSRWEREAK"
     gene            8018..10177
                     /locus_tag="U0290_002128"
     CDS             8018..10177
                     /locus_tag="U0290_002128"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463981.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transglutaminase domain-containing protein"
                     /protein_id="HEM2302167.1"
                     /translation="MKRYLTLVMLFILSVLLISEWIYPFAELTELSTANWIILFITLS
                     LGSFFLRLKYYWTIPLHIVMIIFVSGIYYAKGGILAGNWFVSFFQITFNGFRDMVQFR
                     SSDISMDFILIVFLIALWLLSYITTYSILRKQRVMSVLVLTVAYLAVINTFTDYNSNW
                     AIVRTVLEGFLLLHLALASRIAAPNRISADSLKRNGLFYHIFVILLLAVFVFSSLMLP
                     KKAPIFPDPVPTIKNALGINTTRTVGYSEDDTTLGGALKKDNATVFTARAEKGHYWRV
                     ESKTVYTGTGWANANSADVISFSSGDNFPIQLTEQTTGATNTAEISFASSNDYMPYPY
                     GTQTVNGAVDSFSANLTIERVGPVDTIKNYTVQLKTPVYNIEKMQNADFSTLSNAFVS
                     QYTQTPKDLPDRVTKLANKVTKDADSIYDKTKAIERYLSASGTFTYSTEDAKETPRGA
                     DYVDQFLFETQIGYCDNFSTSMVVMLRSLGIPARWAKGYTPGEGEKKENDAKTTYTIT
                     NNNAHSWPEVFFPGTGWVPFEPTATFSNPENFQEPTTETANKPETPNDSTSTPETPNT
                     ADKTPEQDNGSSSTGETPKKEEPKTETAASNFEIPSWVWWIPAGLVVTLLALAIIFRR
                     RIRRYLLLRSLRNSPEFGKTYHRLMKLLASYGYVRESSETLRHFSTRVDAELTTTEFS
                     RLTKMYEAQIYSNNLTEKVITAEETQLVQQVIARLTK"
     gene            10294..11049
                     /locus_tag="U0290_002129"
     CDS             10294..11049
                     /locus_tag="U0290_002129"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463980.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4866 domain-containing protein"
                     /protein_id="HEM2302168.1"
                     /translation="MTTIFPKEQNVAPLFEQILANPTACRRFKDVFLDNLESYQETRG
                     FEKDDTLFAKIILSAYRQSDVSALLLGVCGRTLFELLRQAFLIPKKLTVDNPFFLTDK
                     EGNFIAKKDDISNREQEKFQEIYQSDLHHSETTIFLVDDDDIVHSYEPDFSISTKRIN
                     KKRGILVLYSLPDTLKLGMTESEVYAFIWKTFLHIQEIIPSSRIFYGQETSENADELG
                     VFLPIHHFEKKMLQNIEQVNELVDALREQMVNK"
     gene            11070..11735
                     /locus_tag="U0290_002130"
     CDS             11070..11735
                     /locus_tag="U0290_002130"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463979.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1275 domain-containing protein"
                     /protein_id="HEM2302169.1"
                     /translation="MARSRQISESIGLGLLLALAGGFMDAYSYIERGQVFANAQTGNI
                     LLFGINISEGNWAIAIQYFWPVVSFTVGIAISEVIHRRDIRRLHWRQLSVLIEAVILI
                     GVAFIPLDHNLIANSLISFVCGIQVESFRKMHGRGVATTMCIGNLRSATQNLCDYFEY
                     KEKQYLRNSLLYFTVILSFIIGAVVGNFFIQLFAQYAILVCAFLQFIAFMMMFIDRES
                     KII"
     gene            complement(11779..12504)
                     /locus_tag="U0290_002131"
     CDS             complement(11779..12504)
                     /locus_tag="U0290_002131"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463978.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302170.1"
                     /translation="MKDKTKKRKWNWAQILAIFVLVTLVVSMVYATVNLITAPSGNVP
                     EGQQTKGDYSLMLMQCVLGVVVLFLPSIISKKMKFVIPNAMYIVFIVFLYCAIYLGEV
                     RSFYYLIPNWDTILHTFSGAMLGGLGFSIVSLLNNDERITLSMSPVFVALFACSFAVF
                     LGVFWEFYEFAADSFGMNMQKTMLEDGTMLQGHAAVADTMGDLFVDFLGAFVISIIGY
                     FSIRKNKKWMKNFEFKKVDEEVK"
BASE COUNT         3741 a         2644 c         2329 g         3917 t
ORIGIN      
        1 tatacatatg ggattacgtt atacaaaaat agactggaag caaagtaatt tcttactttg
       61 tttccagtct gaagtcagca atgcactact atttacttct tacttccctt aaaccaaatt
      121 tcccacaact ttcacgcgca atctggttgc attacccgga tgatacgcta atgggatttc
      181 ttccacttcc accacttcaa tcgagtcagt cactgcaccg gctagagttg cttgttctct
      241 cgctttttgt tcggcatctt ggagcgcttc ttcccgctcg atttgagaat agatgtagat
      301 ttgttcgtat tgtccgctga tttgggaaat ggatgcgccg attgcgttgg ctactgggcc
      361 gtttttgtcg cggaaaattt gtgcgacacc agagatttcg tctggaataa tcacgctacc
      421 accgccaaca agtactagac ttacactccc cgaactggtt ttcattttat caatcgcatc
      481 ttcggtcatt tcagcaattt ttttataggc tttttcggca aaatcggttg ggatatgtgc
      541 gactaattca gggttaccga tttctgccct acctagacga accgcgatgt cggtagtggt
      601 catcgtttta cctccgaaaa ctagtgcttc ttcggaaata cggtagccaa cgctatctgg
      661 tccgattgtt atgtcgccat ctttttcgcg aacgagactt cctccaccaa gtccgatgga
      721 aataatatct ggcattctaa agttggtacg cactccgcca acatcaaccg caagcgagga
      781 ctctctaggg aaaccatccg tcagcactcc aatatcagaa gtcgtgccac caacatcgag
      841 aaccatcgcg tctttaagtc ccgccaagta ggatgcgccg cggatactgt tcgttggtcc
      901 acaagcaatt gtcaaaatcg ggaattgtct tgcatagttt agtgacatta aagtcccgtc
      961 gttttggcaa agatagattt cagcatgcgc aattccttct tgttctagtg ctttttcaaa
     1021 accatcactc gttgccgcaa taactttgaa aagggctgcg tttaaaatcg tcgcattttc
     1081 gcgttcaatc agtccaacag aacctacgga agaggaaatc gaaaccggaa tatctgcgcc
     1141 tagttcttct tcaataattt tttgaacagc taattcctga tcgtttttca aggaagaaaa
     1201 gacgccaaca actgcgacgg attccacttc acctttccaa ctagctaagg tttcacggat
     1261 ttctgcttcg ttgatttctg atagcacctg accatcatac tcatagccgc caccagttaa
     1321 tttatatttt ccagataaaa agccaaccat gtcttccggc caagctgtat atggtaaaac
     1381 ggatgctgtt gcaggatagc ctaaacgaag aacgccaact tttgctaatt ttttacgttc
     1441 cacaatcgcg ttcgtacact gggttgttcc aagcatggcg tgcgttactt tcgagcgatc
     1501 aatgcccgtt tcgctcaata cgcgatgaag tgactcagta attcctgttt caatatcttc
     1561 actcgttggc atttttacac tatgaatgag ttgttgattt tcatctaaaa taacggcatc
     1621 ggtgtttgta ccaccaacgt caattccaat tttatacatg acggcgttcc tcctttttga
     1681 caagttcttc tagtggttca aaattgacat catagccgaa atagcgcggt ccaactgttt
     1741 cgataccttt gtccgttctc caagcatcat cagctggtag tgccatcacg cggacacgtt
     1801 ttccgtattt gagcgcttcc gtcgttaccg gcatcagcgt ttcaaggtct accatacaaa
     1861 ttaaatctgg tgtaattgct atcggttcgc catttttctc cgcaacaaga ttttcgtttt
     1921 ggaaatgaac aatgacttcg ctacctgtgt ctttgtttag tccgtcgatt ttcacacgac
     1981 caaagttgaa gcctgcacgc gtttcccgaa caacatcggt aattttccct tcgaataaat
     2041 gataaccgtg cgttacatct aataattttt gtagtttttc tgcttcgtcc atcgaagttt
     2101 cgcggattac tttaccgatt tcttcagata gtgtcacgat atttttaata ctactttgct
     2161 taatttgcgc accgttacac ggatacaggc tcacaagaga actcgcgccc atttcgaccg
     2221 ttgtcacacg tgcaagtcgt tcggtccatt tattatcaat cgtttccatg atgccaatat
     2281 tacctttttc atcggtgata gccattggtg ttgcggaaat cccgtctaga tggaacgtca
     2341 ccatttgtag ttctggaaaa gctcggccca tgccgtcaca gtccaccatt ggcaaaccta
     2401 gttgagccgc cacaacgatt gggatcattg agtttactcc accagcttcc attggaaatg
     2461 ttccttttac ttctttgcct acatatctac ctaatttttc aaatacacga acgaattcgt
     2521 cgcctttagg aaatttttca atgagtacag acggtgcccc catcatcgcg gctggaatga
     2581 aataatcatc atccgcaatt tcttctgggg ataacagttt aattggtcca tgttttttaa
     2641 ttgcagttaa tgccatcatc ttgcctatat atggatctcc tccgccacca gtgccaagaa
     2701 acgcagcacc aatcgcgata ttttcaatag cttgttcatc taaataacgc atttattttc
     2761 cctccaagtt ttctacattg ttggttttcc cgctcagcac tttcgctccg atcaagtaaa
     2821 cagccagcga caagataata ccgataagtg gttgatttgg taattgtggt agctccggga
     2881 aaaatgtcaa aatgactgga atccccgcaa tgactgcacc aactagccaa gaacttacac
     2941 ccagccagtt gacacctggt actggcgccc atttggattt atctcctttt tggacaatcc
     3001 agtaagaagc aatcattact cctgcaacgg gtggtaccat tgctgaaagt acggacataa
     3061 ttggaacaaa gtggtttaaa attccgataa ccgcgagtat tgttccaagt ccgcctgcaa
     3121 ctgccactgc tactttgtga tatttttcag agatgttaaa tacattgata atcgcaatac
     3181 ctcccgaaaa ggcatttact gcgtttgttg tccatgcagc aagtatcaag ccgataatac
     3241 caagaactgg taatcctaag tttgtaaata cgacagaaat atctgctgta cccgccgtaa
     3301 gtgcaagtac cgctccaacc gtaatcataa gcacacctga tggcaaaatc ccgacaatag
     3361 ctgcttttac aacatcttta cgcgattttg tatattgaga atagtctcct gcaattactg
     3421 cccctaacgc aaatgagcca attgtaattg ctagtcctgt cataaacgac atgcttcctg
     3481 ctggtttata attttcaaca atagctagtc cgccatcgtt taaagaaaca acaagtccgt
     3541 aaatacatac aaatagtaaa actggtactg cgatataatt taaaatactc aaaatacgaa
     3601 taccataaat agctgaaagt aacatgataa ctccccaaat taaggaagaa actggtactg
     3661 gaagattaat tccataaata cctagaaact gtgagaatgc tgcaccacat acattggctt
     3721 gaataccaaa ccatcctaga caagcaatcg ctaaaagaat agatatgatt tttttcgacc
     3781 cttgttctcc aaaaacctgt gaagctacac taactgctgg aatacctaaa tcgctacttt
     3841 gcattccttg atatatcata aataagacaa taacgccgta tcctaaaagt gctattaaaa
     3901 ttgcttccca aagaggcata cctgaaatta aagttcctcc aactagtaga ctcggtacac
     3961 aaatcattgc tccggtccat acaaatgcta aactctgcca ggattgcgtt tgctccactg
     4021 atttcttctc tgtcattatg ttccgcccct ttttcttgaa tttgttatat taatgactaa
     4081 ttatataaga actagctatc atttgtattt atcagaattg aaaaaaaata gcgcaatctt
     4141 tgtcgttttg gacaaaaaat gcactatttt tatttattat tgttatttcc accaagaatc
     4201 cgtcgaatcg ccactgctaa ataaaggttg taggattctg ggatttttgt cgccggatat
     4261 tgcaataact catttatccg ttgtattcga tatttaatcg tatttttatg caggaatagt
     4321 agttcagctg cttgattata attggattca ccttccagta aaaacacaga cagcgtttca
     4381 attagttcat cattatcctc taaaggcttt agtggcctca tttgttctgc aattgctagt
     4441 tctcctcgat ctactatttc cacacatttt gctgcgaaat caatttcttg aagagaataa
     4501 atggacttgt tcgcataaat cgcatttgcc gcatttttat attcattaac gagcgaataa
     4561 gcgctttgca catctgacgt ttgctccatt ccttggcaaa cggtaatttt caagtctatc
     4621 ccatgttctt tcatcatcat cgcaaactca ttggctgtat gcgtccggtc ccgctgcgcc
     4681 actgaattat caagtaaaac aacgatattg tcttcaaata aatcaattaa tgaaacttgg
     4741 aagtgactag ctacaaaact tttcagttca gctaaaactt gctcattgtc gcgaatttct
     4801 tcggttttta caagccacat ccatttaata gaagaaacat ccacatttaa aatcttacca
     4861 agtcgccgca ttttgacact ttcatcattt aaaatggctt tcatcagttc agctgtactg
     4921 atttcgacat agtttctgcc ccataaattc ataaatactt ggactacttc ggtaatttgc
     4981 atgactacat cggctgttaa tacgcctttt tctttcatca taaataagtg catcgcttgc
     5041 ataccgtctt gaaaaatcgg ttttctggcc gtataaaaat cgcgttcatc caaggtaagc
     5101 tgtacaagct catgttcacc gatttgttta gatgcctcaa ttatccgttc aaaatcccag
     5161 tggcgcgttc gtggccaagt gatagaatta attacttgga aagaattatc cgttaagacg
     5221 agcgaagtat gcgttctatc agacaaaatt ttcagtgtgg tatctatatt tcgttgtggc
     5281 ggtcgcacac tcgaaatctg ttctaatgac tcggttacaa agttggtatc tgtcatttct
     5341 tgcttcacaa tcgcttcgac tacttcataa atcacttcgc tatatctaag tgacatctcg
     5401 ttttccggca tcacgataat ggtaaaatca agttcatttg caaaatcaat cagtttttga
     5461 tccattttcg gcacaaaaat tcccacgtag taaagaatta aagcaacttc gccaacctta
     5521 tgtaatcgct caattgtccg acactgtgcc tcaacatcgt cacgaatatt cacaaaagcc
     5581 gatacaacta tttcactgcc ataaaattca tcattatcaa ataaatcatc ttctaaaaga
     5641 gctacctctg tatattctaa aacagaaata gacgaaacaa gcttagataa tccagatttt
     5701 ccagagacta ctttcgcttc ttttaaagat ggtaatttca ttaaatctgc caattttacg
     5761 ctcaaagttc gccacctcca gttattctaa gtgtaaacaa tctcctagaa aaagtccatg
     5821 ccacgttaaa tcttttacat tcaaggccta ttatagtagc attgaaccat gaataaacat
     5881 attctgatta aaaacataag aaaagaaacg gaggcaaatt atgtctatag agccatccat
     5941 taaaatagaa gaaattatta atgaagttga aaaagtaatc gtcggtaaac gacatgttgt
     6001 taaattaagc ttaactgccc tacttgcggg tggtcacgta ttattagaag atgttcccgg
     6061 tgttggtaaa acgatgatgg tccgcaccct ttctaaaaca attggtgttt cctttaaacg
     6121 aattcaattt acaccagatt tacttcccgc agatgtgacg ggggtttcga ttttcaatcc
     6181 tgaaacacgt gattttgaat tccgtccagg tcctgtcatg ggaaatattg ttcttgcgga
     6241 tgaaattaat cgtactgcgc ctcgaactca agccgcttta cttgaaggta tggctgagaa
     6301 tagtgtgaca gtggatggta ttacgcgcaa acttgctaac ccatttttcg ttatggcgac
     6361 gcaaaatccg attgaatacg aaggaacgta tgcccttcca gaagcacaat tagaccgatt
     6421 tttactcaaa attaatattg gttacccgac agtcgaagaa gaaatgcagc tacttacatt
     6481 aaaacaatac caagatccac ttgatcaaac gcagcaagtg gtgacgctca gcgaattact
     6541 ggacctaaaa aacaaagcaa agcaagtctt tattgatgat gttttaaaaa attatattat
     6601 tcgcctagtt gatgcgactc gaaaacaccc ttccgttgcg ctcggaatta gtccgcgtgg
     6661 ctcgctcgct ttcatgcaag ccgctcaagc ttttgcgctt attgaaggtc gagattatgt
     6721 gattcctgat gatattcagt atttagcacc gtatattttc actcatcgtc tcattttgaa
     6781 gtctgaagct tattataatg aggaaacagc cgaatccatt attgcttcca ttttgaaaaa
     6841 cacgtcagtt ccggtagaaa agaggtagct aaatgttgaa aaaacgcctc ctattagcat
     6901 ttcggtggat tattatgcta attatttacg ctgggctttg gacttatacg ttatttcaag
     6961 gtgatactgc tagctggttt ttaacctatt tctttagttt tatcctgtta cttttatttt
     7021 tgtcctcgat ttatccacta aaagcgtgga aagtgaatcg gcgttttgtt aaaaatacct
     7081 atcatgatgg cgatttaatt gatatgcaag tatcattcac tcgaaaatcg cgttatccgg
     7141 tgggttattt gctattccaa caaaaaatac ccgctagttt tggcaatgtg agcgcccgcc
     7201 aacaagtggt ttatccgctt tttaaaaagc atttcacggt tacactagct ggatttgtag
     7261 gcgttcgtgg gattcattca tttccgccag tggatgtaga aactagtgat gctttcggct
     7321 tgttagaacg ttcgcgccaa ctatcttccg aaaaatcgct cactatttat ccaacctatt
     7381 ttccggatgt attagaaaaa atcagtgaag cttctccaga aaacgaacgc aatgccgctt
     7441 attggacgct taagaaaaac agcaatttgc acagtttgcg cgaattttct tctggtgacc
     7501 ggatttctct tattgactgg aaatcttctg ctaaaagcga ccaactgatg actagagaat
     7561 ttgaaaatag tgcaacatca cggttatccg tcatttttta cggagcgagc catcccaatt
     7621 ttgaattatc acttcgggcg gcttactcgt ttattcgcaa aatctccgaa gataatggag
     7681 aaattcgtgt tactctttta ggcgatcaaa caagtaaatt tgctccggcg aaaggtacga
     7741 gtaaacttca agatatatcg actgcttttg cagaaatcgc cccggtagat aatttaacgc
     7801 tgcaagaatc gcttgatagt aatttacatt ctggagagaa aatccttcta ttcacgccat
     7861 gtattgatac gatgttaatg caaaaagtga ctcgtttaac ggataataaa cagctccaaa
     7921 tcattacttt tcaatcagag cattctaaat cgatggatgc tccagcgatt ttccttgagc
     7981 cagcaagtct tctaagcaga tgggagcgtg aagctaaatg aaaagatatt taacgctcgt
     8041 catgctattt attctatctg ttttgcttat ctctgagtgg atttatccat tcgcagagct
     8101 gaccgaactc tctacagcaa actggattat tttgtttata accctttcac tcggtagttt
     8161 tttcctccgt ttgaaatatt attggacaat cccgcttcat atcgtgatga ttatcttcgt
     8221 ttcaggaatt tactacgcta aaggtgggat tttggcaggg aattggtttg tttctttttt
     8281 ccaaatcacc tttaatgggt ttagagatat ggtacagttt cgctcgtccg atatttctat
     8341 ggactttatt ttaatcgttt ttttaattgc tttatggctt ttgagttata ttactactta
     8401 tagtattctg cgcaaacagc gggttatgag tgttttagtt ttaactgttg cttatttagc
     8461 ggttattaat acttttacag attataacag taattgggcc atcgtccgaa ctgtattaga
     8521 aggattttta ttacttcatc ttgcactggc aagtcggatt gcagcaccaa atagaattag
     8581 cgcggactcc ttaaaacgta atggtttgtt ttatcatatt tttgtgattt tgttactggc
     8641 cgtatttgtt tttagttcgt taatgcttcc gaaaaaagca ccgatcttcc ctgatccggt
     8701 accgacgata aaaaatgcgc ttggaattaa tacaacgcgc acggtgggtt atagtgaaga
     8761 tgatacgaca cttggtggtg ctctcaaaaa ggataatgct actgtattca cggcccgggc
     8821 ggaaaaaggg cattactggc gtgtagaatc gaaaacggtc tatactggca ctggctgggc
     8881 aaatgcaaat tccgcggatg tcatatcttt ttcttccggt gataatttcc ctattcaact
     8941 cacagaacaa acaactggtg ctacaaacac ggccgaaatt agctttgctt cttctaatga
     9001 ttacatgcct tatccatatg gaacgcaaac agttaatggc gcagtagatt catttagtgc
     9061 caatttaacc attgagcggg ttggaccagt ggatacaatc aaaaattata cggtccaatt
     9121 aaaaacaccc gtttataata ttgaaaaaat gcagaatgcc gactttagca cactttctaa
     9181 tgcttttgtt tcccaatata cccaaacacc aaaagactta ccagaccggg tgacaaaact
     9241 tgccaataaa gtaacaaaag acgctgattc aatttatgac aaaacgaaag caatcgaacg
     9301 ctatttaagc gcttctggca cctttactta tagtacagag gatgcgaaag aaacgcctag
     9361 gggagccgat tatgtcgatc aatttttatt tgaaacgcaa attgggtatt gtgacaattt
     9421 ttctacttcc atggtagtca tgcttcgatc gcttgggatt ccagcaagat gggccaaggg
     9481 ctacacacct ggtgagggtg agaaaaaaga aaatgatgct aaaacgactt atacaatcac
     9541 aaataacaat gcacattctt ggccggaagt gtttttccca ggaactggat gggttccatt
     9601 tgagccaaca gcaacattct ccaatcccga aaacttccaa gaaccaacaa ctgaaacagc
     9661 taataaacct gaaacaccta atgatagtac gagtacgcca gaaacaccaa atacagccga
     9721 taaaacacca gaacaagata acggtagcag ctccacaggt gaaacaccga aaaaagaaga
     9781 acctaaaaca gaaacagcgg cctctaattt cgaaattccg tcttgggttt ggtggattcc
     9841 tgctggacta gttgtgacac tgctcgcact agctattata ttcagacgta gaattcgtag
     9901 atatttattg cttcgttctc tgagaaatag tccagaattt ggcaaaacct atcatagact
     9961 tatgaaatta cttgcttctt atggttatgt ccgcgaatcg agtgaaacgt tacgtcattt
    10021 tagcaccaga gtggatgctg aattaacaac gacagaattt tcgcgactaa cgaaaatgta
    10081 tgaagcccaa atttatagta ataacttaac ggaaaaagtg ataactgcgg aagaaacgca
    10141 gcttgtgcaa caagttatag ctcgattaac taaataaaca gagaaaaagc gcctaagaaa
    10201 atattcatgg cgctttttct tatgtaatat ttttatcttt tcttcgtaaa tatgcgataa
    10261 tgttaacatg aataaaataa aggagacttg aaaatgacaa ctattttccc aaaagaacaa
    10321 aatgtcgctc cccttttcga acagatattg gctaatccaa cagcttgcag acgttttaaa
    10381 gatgtatttc tagataattt agagagctac caagagacgc gtggttttga aaaagatgat
    10441 actctttttg ctaaaattat tttgtcggct tataggcaaa gtgatgtaag tgccttgttg
    10501 ttaggtgttt gcgggagaac attattcgaa cttctcagac aagctttcct tattcctaaa
    10561 aaattaacag tggataaccc gttcttttta acagataaag aaggtaattt tatagccaag
    10621 aaggacgata tttctaaccg cgaacaggag aaatttcaag agatttatca atcggatttg
    10681 catcattctg aaacaacgat tttcttagta gatgatgatg atatcgttca ttcctacgag
    10741 ccagattttt cgatttccac caaacgaatc aataaaaaaa gagggatttt ggtactgtac
    10801 tctcttcctg atactttaaa attaggaatg actgagtcgg aagtctatgc gtttatttgg
    10861 aaaactttct tgcatataca ggaaatcatt ccatccagcc gaattttcta cggacaagaa
    10921 acatcagaaa atgcagatga acttggcgta tttcttccaa ttcaccattt tgagaaaaaa
    10981 atgctgcaaa atattgagca agttaatgag ctagttgatg ctcttcgtga acaaatggtt
    11041 aataaataag aaaaaaagga tgaaaaatca tggcaagatc tagacaaatt tcagaatcaa
    11101 tcggtttggg gcttttactt gctctggctg gcggatttat ggatgcttac tcttacattg
    11161 aaagaggtca ggtattcgct aatgcgcaga ctgggaacat acttttattt ggaattaata
    11221 tttcggaggg gaactgggct atcgcaattc agtatttttg gccggttgtc tcttttacgg
    11281 tcggaattgc gatatctgaa gtgattcatc ggcgtgatat taggcgtctt cactggcgcc
    11341 agctttctgt cttgatcgaa gcggtaattt tgattggggt cgcatttatt ccacttgatc
    11401 ataatctgat tgccaattcg ctcatatctt ttgtatgtgg tattcaggta gaaagcttcc
    11461 gaaaaatgca tggtagaggg gttgcgacga cgatgtgcat agggaatttg cggagcgcta
    11521 cccaaaactt atgtgattat ttcgagtaca aggaaaaaca atatttgcgt aacagcttgc
    11581 tatattttac cgttattctt agttttatca ttggtgcggt tgtagggaat ttctttattc
    11641 agttattcgc acaatatgct attctcgttt gtgcattttt acagtttatc gcctttatga
    11701 tgatgtttat tgatagagaa agtaaaataa tataaaaaaa ctgccaacaa aatgatttct
    11761 cactttgttg gcagtttttt attttacttc ttcatctact tttttaaatt cgaagttctt
    11821 catccatttt ttatttttgc gaatggagaa gtagccgatg atggatatca cgaaagcccc
    11881 gaggaaatcg acgaacagat cgcccattgt atcagcaact gctgcatgac cttgaagcat
    11941 cgtgccatct tctagcattg ttttttgcat gttcattcca aagctatcgg ctgcaaattc
    12001 atagaactcc cagaaaacac ccaagaaaac agcaaagcta caagcaaata atgcaacgaa
    12061 aaccggactc atcgaaagag taatccgttc atcattattc agtaagctca caatagaaaa
    12121 accaagtccc ccaagcattg ccccactaaa cgtatgtaga atcgtatccc agttaggaat
    12181 taaataatag aaactacgaa cttcgccaag ataaatggca caatataaga aaacgataaa
    12241 aacaatatac atcgcattcg gaatgacgaa tttcattttt ttactaatga tggatggtaa
    12301 gaatagaact accacgccaa gtacacactg cataagcata agtgagtagt cgccctttgt
    12361 ttgttgtcct tctggaacat taccagatgg cgctgtaatt aagttaactg ttgcataaac
    12421 catcgaaact acgagcgtta ctaatacaaa aatagccaaa atctgtgccc agttccattt
    12481 tcttttcttt gttttgtcct tcatgaagcg tctcacccct ttttaaaata tgtattcatt
    12541 ataatctatg tgaagcgaaa aaagaaattt aaaaccagct tgccgcttct tcataacgct
    12601 tttgtgacaa tttcctgtct aaaatcagct a
//
LOCUS       DASDYO010000093        12474 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.093, whole genome shotgun sequence.
ACCESSION   DASDYO010000093 DASDYO010000000
VERSION     DASDYO010000093.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12474)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12474)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12474
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.093"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            95..688
                     /locus_tag="U0290_002132"
     CDS             95..688
                     /locus_tag="U0290_002132"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEM2302171.1"
                     /translation="MKKLLFLGDSVTDAGRDFENDRELGHGYVKIIADQLEQEDVTVI
                     NRGVSANRVADLHRRIEADAISLQPDVVTIMIGINDTWFSFSRWEDTSVTAFKEVYRV
                     ILNRIKTETNAELILMEPFVLPYPEDRKEWRGDLDPKIGAVRELAAEFGATLIPLDGL
                     MNALAIKHGPTFLAEDGVHPTKAGHEAIASTWLEFTK"
     gene            874..1833
                     /locus_tag="U0290_002133"
     CDS             874..1833
                     /locus_tag="U0290_002133"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DMT family transporter"
                     /protein_id="HEM2302172.1"
                     /translation="MQKEKAPIGLYFLLIAVMASWGFNVTMTKVLVSYFPTVTMTSFR
                     IFTAAITVIIILFITKKLRLPTKWEFGLIFLASIFNIVIHHFFLSNGLKLTTGTNAGL
                     ILGSAPIVVAIFSVVFLRERIGAWRALGFLAGIFGVSLVVLSNGTGISGISLGDIDIF
                     IAMASQAFSFIIIKKLAGSMDTGLMTGYMLFLGSVMLFGLSRFMEPGGMSELVAVHSW
                     KLWLLFVVSAVVATAFGNFVYNYAVGKIGPSRSAIFMNFNPLFSLIGALLFLGEAIKI
                     PQLVGFGFIIIGVLLGSGALMDLIYERKKTKVRDPEKLLEKEV"
     gene            1908..2132
                     /locus_tag="U0290_002134"
     CDS             1908..2132
                     /locus_tag="U0290_002134"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464024.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HEM2302173.1"
                     /translation="MKLLLKNINELAAKQKSEGLTAFEKERQAALRQEYLKKIRGTVQ
                     DNLHHVTIIDPLGDDVTPKKLKEIQAELRG"
     gene            2299..2748
                     /gene="rpiB"
                     /locus_tag="U0290_002135"
     CDS             2299..2748
                     /gene="rpiB"
                     /locus_tag="U0290_002135"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464026.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEM2302174.1"
                     /translation="MEIAIAADHGGFQLKEKIRAHLIESGYTVKDFGCYSLESVDFPE
                     YAAKVGHFVATENSLGVLCCGTGIGMSMAANKIKGVRAAVVSDAFSAMMTRRHNNSNV
                     LCLGERVLGDSLALLLLDTWLAAEFEGGRHNTRLAKLAELEEPEEDK"
     gene            2745..3413
                     /locus_tag="U0290_002136"
     CDS             2745..3413
                     /locus_tag="U0290_002136"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM2302175.1"
                     /translation="MKMIAASIMCSDSLHLADELRALEQANVKMLHCDVMDGVFVENA
                     AMGAYVLQDIKNNTDMLLDIHLATVNPDKFVDLYAAIKPAYMSFHVEASPDVDATIKH
                     IRALGIKPSIAISPDTEIEQIYPFLDKVDMVLMMTVNPGFAGQKFQHHVLEKIKKLQR
                     ELESHTNKPLIEVDGNIFEETVRLLEPIGADVYVVGTAALFNDKAGSYTEKLAPLREI
                     IQER"
     gene            3420..4070
                     /locus_tag="U0290_002137"
     CDS             3420..4070
                     /locus_tag="U0290_002137"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464028.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TalA family protein"
                     /protein_id="HEM2302176.1"
                     /translation="MHLDSANLEDVKKIQASSIFKGITTNPTILVKEKCNRQTAINRI
                     LELTDKQVFVQTVGFSYEEILADARMLLAMFGKEKIAIKIPAHEAGINVIDTLKKEDK
                     TIQILGTAIYSADQAIAAALAGADFVAPYVNRMSAANIDPFKEIAGMRHFFDKKALKT
                     QIMAASFKHSGQVMQAYESGADTVTIPYEIYSQMTNKVLAVEAIRVFNEDATLYEK"
     gene            4178..6238
                     /locus_tag="U0290_002138"
     CDS             4178..6238
                     /locus_tag="U0290_002138"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464029.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2302177.1"
                     /translation="MYLDNRSKTLFQEVIKNPNITNKQLEVKYKLSRYQISYSFQKVN
                     EWLKWKNYPEVKRSKNGRFILEPELTALFSEKETRDPSVEYLPSENERANLILLMLLT
                     AKEELSLAHFTTKIQVSKNTILRDLKVAQKLLPKETTVTYSRASGYQLAGSEWELRKV
                     LTQVVSSVKEMFRGEHYFLSYSGIEKVQLMEIRRTLEEAEAMMQIKFTYEQIELLPYL
                     LSVMFLRIRDRRLIDTAFHIDEKSLSDTREYHITDILLEKTGPVPEQERLFITLQLLT
                     TNIFSGEILTEKLTEDLEKVVLTCLDLFEKKALVSLKNKHILIEKLLLHLKPAYYRIK
                     YQMNLEDTLYEKFNQEFEALNFIVKEAFDPLAKFIGREIPAGEIFFISLFIGSDMIPQ
                     NDIYHKQKRAIVLCPSGVTFSKIMENILVKLFPEIHFYPTISVREYAFFKAEVDIVFS
                     SIPLKDGENVFVVQPFMNDIEKTQLRQHVLQNLFGMGNQLTSIDKIMEVVERNADIKD
                     PNAIRDGIIDILSANTATDENKRVKKVYLHDLITEDNIMICEDVKNYQEAIRLASQPL
                     LLQQAITANYVKTMIDNHKFHDPYIIIGEDIAIPHAMPNAGVNRLAMSLLVVKNGVYF
                     SETEQVHFVIVIAPVDKEQHIEALYQIVHLAENHQILDDLLENVTKEKVMQTINQLVI
                     REDE"
     gene            6242..6844
                     /locus_tag="U0290_002139"
     CDS             6242..6844
                     /locus_tag="U0290_002139"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SIS domain-containing protein"
                     /protein_id="HEM2302178.1"
                     /translation="MDKQAILDNIHQTWQEEANAISRLPEVTSEEALVKTVEKIAECT
                     GKIVVAGCGTSGVAAKKLVHSFNCIERPAVFLTPSDAVHGTLGVLQKEDILILISKGG
                     NTGELLNLIPACKTKGSTLIGVTENPDSVIAKEADIFFPVSVSKEPDPFNMLATASTM
                     AVIASFDAVIVCLMTYMNYTKEQFSVIHPGGAVGNKLLNK"
     gene            6872..7339
                     /locus_tag="U0290_002140"
     CDS             6872..7339
                     /locus_tag="U0290_002140"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464031.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2302179.1"
                     /translation="MDVLEYFKEEMVRFSNEQDKEKLLTEMAEQLCEVGAVKPSYKDA
                     VIKREKVFPTGLLTAHAGVAIPHTDSEHVIRPVVAVRILKKPVSFIEMASDNEAIDVR
                     IVFMMALRSADEQLDMLQTLIHLIQDEEVMTTLLKAQETGDVLSAIEHFSKNN"
     gene            7356..7754
                     /locus_tag="U0290_002141"
     CDS             7356..7754
                     /locus_tag="U0290_002141"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464032.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302180.1"
                     /translation="MGSFFASFVDWLIGSPGRFVVNLIEDNMLIFMFVVMIYATTILY
                     AKWTLAYYLPKKMNQLAEMKTWELDELYAAWQTEKKALPWYILVPSRNEFWVKSARNA
                     PESTKLLHFSQQKLKLSDKEKLQKIIEIQS"
     gene            7765..8415
                     /gene="rpe"
                     /locus_tag="U0290_002142"
     CDS             7765..8415
                     /gene="rpe"
                     /locus_tag="U0290_002142"
                     /EC_number="5.1.3.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464033.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribulose-phosphate 3-epimerase"
                     /protein_id="HEM2302181.1"
                     /translation="MAKIVPSVFGADIGRINEQLEVLEKNGIDLLHVDMMDGSFVPNI
                     AFGPDQIKMMKKGTKLQFDVHMMVYEPDRYIPRLVEAGAHMITVHQEATTHLHRTIQL
                     IKSYGVRAGVVLNPGTPPSTLEYVLDDIDCILLMTVNPGLGGQKFFQSSLEKIRKTKA
                     YIGNRPIQIEVDGGVNAELAKECTLAGADLIVVGSYLFEGDIEANLEKLSKGVLTE"
     gene            8412..9458
                     /locus_tag="U0290_002143"
     CDS             8412..9458
                     /locus_tag="U0290_002143"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactitol-1-phosphate 5-dehydrogenase"
                     /protein_id="HEM2302182.1"
                     /translation="MKALKLYGKRDLRYEEADMPTIEQPDDVILKVKTVGICGSDISR
                     YSKLGPYVPGMVWGHEFSGEVIEVGSEVTDIEIGDRAAGCPALYCGECEYCKKGEFAR
                     CRKLTVIGARHPGAYAEYIKLPAENVVKIPDELDYEAAALVEPSAVVVHGFYHTKLQA
                     GDDVVVVGSGNIGLLAIQWAKVFGAKRVIAIDVDDKKLALAKEVGADVVINSLKEDPL
                     EVVAAHTDGLNADLVVEAAGSPITSAQVFAYAKKGGGVVFLGIPYADVTIERFYFEKI
                     VRSELTVWGSWNAISAPFPGKEWQTTIHFLANKQINIEPMITHRLSLAEGPEVFERIY
                     ERNEFFGKVLFFPE"
     gene            9474..9767
                     /locus_tag="U0290_002144"
     CDS             9474..9767
                     /locus_tag="U0290_002144"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2302183.1"
                     /translation="MKKKKIYVCCGTGIATSTVISKKVRAVLDEKRIPYEISQCTVQE
                     VASKVSTSKPDIIVSSTTVTGDVGDVPVVIGRSFLTGLKKQEAIDEILAILQD"
     gene            9782..11053
                     /locus_tag="U0290_002145"
     CDS             9782..11053
                     /locus_tag="U0290_002145"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS galactitol transporter subunit IIC"
                     /protein_id="HEM2302184.1"
                     /translation="MDIILDFFKYIIGLGVTVMMPIIITILGVIFRKKISVAFKAGLT
                     VGVGFVGLGVITSLMLTTITPVTKALVENYNFKLTATDIGWGVGSSLAWGTEVVPFVF
                     VAIIATNILMIAFKWTKTMDVDIWNYWQPLFIASALYLTTGSMIIAILSSIINMAIIF
                     KIADWTQKDVENVLGLEGISLPQIQTTGWALVGYPMNWLLGKIPGVRKINWSTEKVQS
                     RLGIFGEPMLMGLIIGGGLAAIAQMPLSQVLQTGVTIAASLVLIPRMVSLLMDGLTVI
                     SEAAHEFMEKRFPGRELFIGLDSAVGIGHPFVLSLGLLMIPITLILAFILPGNKVLPL
                     ADLTALPFYMIFAIVPSKGNLFRGIFTGIVIVIITLYLSGAAAPLMTELAGQIGYNIP
                     KDAVEVTSLAVGTQWYTWIVYYGLHWFGGIL"
     gene            11193..12128
                     /locus_tag="U0290_002146"
     CDS             11193..12128
                     /locus_tag="U0290_002146"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate pyrophosphokinase"
                     /protein_id="HEM2302185.1"
                     /translation="MAGKMKLFSVTSERPLATKIADYLDIPLCEVELQKFSDGEVKIN
                     IEESIRGTNAYVVQSMNSNVNERLMELLIMVDALKRASVHSINIIMPYYGYARQDRKA
                     RSREPITAKLMANLIQRAGADRLITVDLHAAQIQGFFNIPIDHLSAIPLIGDYLIENY
                     GEKDVVVVAPDHSGVVRARRIADRLNAPIAILNRKPRPHEDEIMSVIGDVKGKVAIVV
                     DDIIDTGVRATTSADILLEKGAVEVIACATHSVMAGNATERLQNSNIKEVITSDSIDL
                     PEDKQFDKLTTISIGRILGRAIEGVQENRSLHPLF"
BASE COUNT         4021 a         2160 c         2717 g         3576 t
ORIGIN      
        1 ctaaaaaaat aagctatgca aaaaatgaat acaactaaat tgaagttttt ttgttataat
       61 aaggcatcag gaattttaaa ggagacggaa ctaaatgaag aagttgcttt ttttaggtga
      121 tagtgtgaca gatgcggggc gagattttga aaatgaccgc gaattaggac atggttatgt
      181 gaaaataatt gcagaccagc ttgagcaaga agatgtaacg gttataaatc gtggcgttag
      241 tgcgaaccgt gtggcggatt tgcatcgtcg tattgaggcg gatgcaattt cacttcaacc
      301 agatgtagtt acgattatga ttgggataaa tgatacgtgg tttagtttta gcagatggga
      361 agatacttcg gtgacggcgt ttaaagaagt gtatcgtgtg attttgaatc ggattaaaac
      421 agaaacaaat gcggaactca ttttgatgga gccgtttgta ttaccatatc cggaagatcg
      481 gaaagagtgg cgtggtgatt tggatccaaa aattggagct gtgcgcgaac ttgcggcaga
      541 atttggtgca acgcttattc cgcttgatgg gctaatgaac gccctcgcta tcaaacatgg
      601 gccgaccttt ttagctgagg acggggtgca cccgaccaaa gcaggacatg aagcaattgc
      661 ctctacttgg ttagaattta caaaataacg ctttacagaa aaaattatcc atgctatagt
      721 tgggtctatg cgatgagcct acaagcagtg acttaagtat cactgcccca ttttccgcgt
      781 tatagctttg tggaaggctg cggaagatga cgctatgaaa tgccccttaa agtaatttaa
      841 ggggcatttt tctataaaaa aggagtgttt gttttgcaga aagagaaagc accgatagga
      901 ctttattttt tattaattgc agtgatggcg agttggggtt ttaatgtcac gatgacgaaa
      961 gtattagtta gctattttcc gactgttacg atgacatctt ttcgaatttt caccgcagct
     1021 ataaccgtta ttattatttt atttatcaca aaaaaattac gtctgcctac aaaatgggaa
     1081 tttggtttaa tttttctcgc gagtattttt aatattgtta ttcatcattt tttcttgtcg
     1141 aacgggttga agctgacgac tgggacgaat gctgggctta ttcttggttc tgcgccgatt
     1201 gtggtggcga ttttttctgt ggtttttctc cgtgaacgaa ttggagcttg gcgtgcgctc
     1261 ggctttttag cagggatttt tggcgtgagt ttggttgttc tttcaaatgg gacggggata
     1321 agcgggattt cactgggaga tatcgacatc tttatcgcga tggcttctca ggcatttagt
     1381 tttattatta ttaaaaagct cgctggatca atggacacgg ggctgatgac tggatatatg
     1441 ctatttcttg gttcggttat gttgtttggt ttaagtcgct tcatggagcc gggtggcatg
     1501 tcagaattag tggcggttca ttcatggaaa ctgtggctct tgtttgttgt ttcagctgta
     1561 gttgcaacgg catttggcaa tttcgtttat aattatgcgg ttgggaaaat tgggccgtca
     1621 cgctcggcta tttttatgaa tttcaatcca ttattttcac taattggcgc attacttttc
     1681 cttggagaag caattaaaat cccccagcta gttggcttcg gttttattat tattggcgtc
     1741 ctacttggtt cgggcgcatt aatggatctt atttatgaac gcaaaaaaac aaaagtacgc
     1801 gatcctgaaa aactgctcga aaaagaagtt tgacttttgt tgacctttat attataattt
     1861 ggttagttac ttattaaaag taactagata atgataggag ggatagcatg aaattgttat
     1921 taaaaaatat taatgaactt gctgcaaaac aaaaaagtga aggattaact gcttttgaaa
     1981 aagaaagaca agctgccctt cgtcaagaat atttgaaaaa aattcgagga actgttcaag
     2041 ataacttaca tcacgtaaca atcattgatc cacttggaga cgacgtaact cctaaaaaac
     2101 taaaagaaat ccaagccgaa ttaagaggct gatataagtc atagaaggtt gaaagagctc
     2161 attgcttttt cagccttttt ttgttgatag agctaattta ccatcttgcg gattcgagta
     2221 gagaaaaatg gtgccgaaca gttctaacag tttgaggaag gccggtgcta caatcaaggt
     2281 gagaaaggag aggataacat ggaaattgca attgcagctg accatggcgg atttcagttg
     2341 aaagaaaaaa tccgcgcgca tttaattgaa agcggctaca cagtaaaaga ttttggttgt
     2401 tattcattag aaagcgtgga ttttccagag tatgccgcta aagtaggaca ctttgttgca
     2461 accgaaaaca gtttaggtgt gctctgttgc ggaacaggga ttggaatgtc tatggcagcc
     2521 aacaaaataa aaggtgttcg tgctgctgtt gtttcagatg ctttttcagc aatgatgacg
     2581 aggcgacata ataatagtaa tgttctttgt cttggtgaac gtgttctggg cgatagtctg
     2641 gcgttactct tacttgatac gtggcttgcg gcagaatttg aaggtggaag acataataca
     2701 aggctcgcga aattggcgga gcttgaggaa ccggaggaag ataaatgaaa atgattgcgg
     2761 cttccattat gtgttcagac tcgcttcatc tcgctgacga acttcgcgca ctcgaacaag
     2821 caaatgtaaa aatgctccat tgtgatgtga tggatggtgt ttttgtagaa aatgcagcaa
     2881 tgggcgccta tgtccttcaa gatataaaaa acaatacaga tatgctacta gatatccact
     2941 tagctacagt gaaccctgat aaatttgtgg atttgtatgc ggcgataaag ccggcttata
     3001 tgtctttcca cgtagaagct tcacctgatg tcgatgcgac tataaagcat attcgtgcgc
     3061 taggaatcaa accgtccatc gccatcagcc cggatacaga gattgaacag atttatccat
     3121 ttttagataa agtcgatatg gttttaatga tgaccgttaa cccaggattc gccggacaaa
     3181 aatttcagca tcatgtccta gaaaaaatca agaaacttca aagagagctt gaaagtcaca
     3241 ccaataaacc attaattgaa gtagacggta atatttttga agaaacagtt cggttgcttg
     3301 aaccaattgg cgcagatgtc tatgtcgttg gaacagccgc attatttaac gacaaggcag
     3361 gtagttatac agaaaaattg gcgccactca gagaaattat ccaagaaagg tgagggaaaa
     3421 tgcatttaga ttcagctaat ttagaagacg tgaaaaaaat tcaagccagc tccattttta
     3481 aaggaattac aacgaaccca accattttag taaaagaaaa atgcaatcga caaacagcga
     3541 ttaatcgtat tttagaactt acggataaac aagtttttgt acaaacagtt ggttttagct
     3601 atgaggaaat tttggcagat gcgcgcatgt tactagcgat gtttgggaaa gaaaaaatag
     3661 ctattaagat tccggcacat gaggctggta ttaatgtgat tgatacactc aaaaaagagg
     3721 ataaaaccat tcaaatctta gggactgcta tttattcggc tgatcaagca atcgcggctg
     3781 ccttggctgg tgcagatttt gttgccccat atgtgaatag gatgagcgca gcgaacatcg
     3841 atccttttaa agaaattgct gggatgcgtc acttttttga taaaaaggca cttaaaacac
     3901 aaattatggc agcgagcttt aaacatagcg ggcaagtaat gcaagcttat gaaagtggcg
     3961 cagatacggt aactattcct tatgaaattt attcgcaaat gaccaacaaa gttttagcag
     4021 tagaagcaat tcgtgtcttt aacgaagatg ctacattgta cgaaaagtaa caatctcctt
     4081 ctcatgttgt ggaagtgtgt ggagaaaact tgtgatgaaa gcgcattctt aagcgccaaa
     4141 ccctatgcta taattaggct atcaaagggg gagacgcatg tatctggata acagaagtaa
     4201 aacactattt caagaagtta taaaaaatcc gaacattaca aataaacaac tcgaagtaaa
     4261 gtataaatta tcgcgttacc aaatcagcta tagttttcag aaagtaaacg aatggctcaa
     4321 gtggaaaaat tatccagaag taaagcgttc caaaaacggc cgatttatat tagaacccga
     4381 gcttacagcg ctattttctg agaaagaaac tcgagatccg agcgtagaat acttaccttc
     4441 tgaaaatgaa cgtgccaatt taattttgct aatgctttta acagccaaag aagaactatc
     4501 cctcgcccat tttacaacga agattcaagt aagcaaaaac accattcttc gtgatttaaa
     4561 agtagcgcaa aaattacttc ctaaagaaac aactgtcact tatagtagag catcgggtta
     4621 tcagttagca gggagtgaat gggaacttcg caaggttctg acacaagttg taagtagtgt
     4681 gaaagagatg ttccgaggag agcactattt cctatcgtat tcaggaattg aaaaagtcca
     4741 actaatggaa attcgccgca cactcgaaga agcagaagcg atgatgcaaa taaaattcac
     4801 ctatgagcaa atcgaattat taccctattt gctatccgtg atgttcttaa gaatcagaga
     4861 ccggcgctta atcgacactg cttttcatat tgacgagaaa tcactttcag acacgcgaga
     4921 ataccacatc accgatattt tgctcgaaaa aactggccca gttccagaac aagagcgact
     4981 tttcatcaca ttacaacttc ttacaacaaa cattttttcc ggcgaaattt taactgaaaa
     5041 attaacagaa gacttggaaa aagttgtcct cacatgctta gacttattcg agaaaaaagc
     5101 acttgtttct cttaaaaaca aacatatctt aatcgaaaaa ttactcttac atttaaaacc
     5161 agcctattac cggattaaat accaaatgaa tttagaagat acgctttatg aaaaattcaa
     5221 ccaagaattc gaagcgttaa acttcattgt gaaagaagca tttgacccac ttgcgaaatt
     5281 tattggtcgc gaaattccag ccggcgaaat tttcttcatt tctttgttta ttgggagcga
     5341 catgataccg caaaacgata tttatcataa acaaaaacgt gcgattgtgc tttgtccgag
     5401 cggggttact ttttcaaaaa tcatggaaaa tattttagtg aaactattcc cggaaatcca
     5461 tttttatcca actatatctg ttcgggaata tgcctttttt aaagcagaag ttgatattgt
     5521 tttttcatcc attccgttaa aagatggcga aaatgtcttt gttgttcagc catttatgaa
     5581 tgatatcgaa aaaacgcaac tgcggcaaca cgtcttgcaa aatttatttg gaatgggaaa
     5641 ccagctcacg agtattgata aaatcatgga agtagtggaa cgtaacgccg atataaagga
     5701 tccgaatgca atacgagatg gaattattga tattttgtcg gctaacacag ctacagatga
     5761 aaataaacgc gtgaaaaaag tctatttaca tgatttaatc accgaagata acatcatgat
     5821 ttgtgaggat gttaaaaact atcaagaagc gattcgtcta gcaagtcagc cgctgttact
     5881 acaacaagca attacagcaa actatgtaaa gaccatgatt gataaccata agttccacga
     5941 tccgtacatt attatcggtg aagatattgc cattccacac gctatgccta atgcgggggt
     6001 gaatcgactc gctatgtctc ttttagtcgt gaaaaatggc gtatattttt cagaaacaga
     6061 gcaagttcat ttcgtaatag ttatcgcacc agtggataaa gagcaacaca ttgaagcact
     6121 ttaccaaatc gttcatttag ccgaaaatca ccaaatttta gacgatttgc tcgaaaatgt
     6181 aaccaaagaa aaagtcatgc aaactatcaa ccaattagta attagagagg atgaataaat
     6241 tttggataaa caagctattt tagataatat tcaccaaaca tggcaagaag aagcaaacgc
     6301 gatttcccgt ttgccggaag taacaagtga agaggctctc gttaaaacgg ttgaaaaaat
     6361 cgccgagtgc actgggaaaa ttgtcgtagc tggttgtgga acatccggcg tcgctgcgaa
     6421 aaaattagta cactctttca actgtatcga acgtccagca gtctttttaa caccatcaga
     6481 tgctgtgcat ggaactctcg gtgtacttca aaaagaagat atattgattc tcatttcaaa
     6541 aggtggaaat acaggcgaat tacttaattt aattcctgct tgtaaaacaa aaggaagcac
     6601 actgattggt gtaacagaaa acccagattc cgttatcgcc aaagaagcag atatcttttt
     6661 cccagtgagt gtaagcaaag aaccagatcc gtttaatatg ttagcaacgg caagtacaat
     6721 ggctgttatt gcaagttttg atgcagttat tgtttgctta atgacctata tgaattatac
     6781 aaaagagcag ttttccgtca tccatcctgg tggtgccgtt ggaaacaaat tattaaataa
     6841 ataaacaagc agccagtcgg agggatgcaa tttggatgta ttagaatatt ttaaagaaga
     6901 aatggttcga ttttcaaacg aacaagataa agaaaaatta cttacagaaa tggcggaaca
     6961 gttgtgtgaa gtgggcgcag taaagccaag ctataaagat gcagtaatta aacgggaaaa
     7021 agtttttcca accggattac taaccgcgca cgccggggtt gccattccgc atacagatag
     7081 cgaacatgtt attcggccag tggtggctgt acgaatactc aagaagcccg tttcatttat
     7141 tgaaatggcc tctgataacg aagcaatcga tgtcagaatt gtctttatga tggcgctaag
     7201 gagtgccgat gaacaactag atatgctgca aacacttatt catcttattc aagacgagga
     7261 ggtgatgacg accttactta aagcgcaaga gacgggagat gttctttccg caatagaaca
     7321 tttttctaag aataattaag ggaggtcggg aatagatggg gagttttttt gcaagttttg
     7381 tagactggct aataggaagt ccaggtagat ttgtcgttaa cttaattgaa gataatatgt
     7441 taattttcat gttcgtagta atgatttacg ccaccaccat tttatacgcc aagtggacac
     7501 tcgcatacta cttaccgaaa aaaatgaatc agttagcaga aatgaaaacg tgggagctgg
     7561 acgaattata tgcagcgtgg caaacagaga aaaaagctct accgtggtac attctcgtgc
     7621 caagccgaaa tgaattttgg gtaaaatcag cccgaaatgc accagaatca actaaattac
     7681 tccattttag tcaacaaaaa ttaaaactaa gtgacaaaga aaagttacaa aaaatcatag
     7741 aaattcaatc ttgaggtgat aatagtggca aaaatagttc cgtctgtttt tggagcagac
     7801 atcggcagaa ttaatgaaca gttagaggtt ctagagaaaa atggcattga tttattacat
     7861 gtggatatga tggatggctc gttcgtcccg aacattgctt ttggtccaga tcaaatcaaa
     7921 atgatgaaaa aaggcacgaa gcttcaattt gatgttcata tgatggtgta tgaaccagac
     7981 cgttatattc caagattagt ggaagcaggc gcacatatga ttacagtcca ccaagaagca
     8041 acaactcatt tgcatcgtac aattcaacta attaaaagtt acggagttcg cgcgggagtg
     8101 gtattaaatc ctggtacacc accaagcact ttggaatacg tgttagatga tattgactgt
     8161 attttgctta tgactgtaaa tccaggctta ggtggtcaaa aattcttcca atcaagttta
     8221 gaaaaaatca gaaaaaccaa agcatatatt ggaaatcgtc ctattcaaat tgaagtagat
     8281 ggcggagtaa atgctgaact cgcgaaagaa tgcacacttg caggcgcgga tttaatcgtt
     8341 gtaggatctt acttatttga aggagatatc gaagcgaatt tggagaagtt atcgaaagga
     8401 gttttaacag aatgaaagct ttaaaattat atggaaaaag agatttgcgt tatgaagaag
     8461 cggatatgcc aacaatcgaa cagccagatg atgtgatttt gaaagtgaaa acggttggga
     8521 tttgcggatc tgatatttcg agatacagta aacttggtcc gtatgtacca ggaatggtgt
     8581 ggggacatga attttcagga gaagtgattg aggttggtag tgaggttaca gatattgaga
     8641 ttggtgatag ggctgccgga tgcccagcac tctattgcgg agagtgtgaa tactgtaaaa
     8701 aaggcgaatt cgcccgctgt cggaagctaa cagtaatcgg agcaagacat cccggagcct
     8761 atgctgagta tatcaaactt ccagcagaaa atgtagtaaa aataccagac gaattagatt
     8821 atgaagctgc tgcacttgtc gagccttccg cagtggtcgt tcatgggttt tatcatacga
     8881 aattacaagc aggcgatgat gtcgtcgttg tcggaagcgg caatataggt ttgctagcaa
     8941 ttcaatgggc aaaagttttt ggcgcaaaaa gagttattgc aattgatgta gacgataaaa
     9001 agttagctct tgcaaaagaa gtaggagcag acgtcgttat taattcttta aaagaagatc
     9061 cattagaagt agtcgcagca catacagatg gtctaaacgc tgatttagtt gtagaagctg
     9121 ctggatcacc tattacatct gcccaagttt ttgcctatgc gaaaaaaggt ggaggcgtcg
     9181 ttttcctagg gattccatac gccgatgtaa caatcgaacg tttctatttt gaaaaaattg
     9241 ttcggagtga gcttactgtt tggggctcat ggaatgcaat ttctgcacca tttccaggaa
     9301 aagaatggca aacaaccatt cacttcttag ctaataaaca aatcaacatt gaaccaatga
     9361 ttacacatcg tctttcactt gctgaaggac cagaagtttt tgagcgaatc tatgaaagaa
     9421 atgaattttt cgggaaagta ttatttttcc cagaataata gggggatttt aggatgaaaa
     9481 agaagaaaat ttatgtttgt tgtgggactg gaattgcaac ttccactgtt atttccaaaa
     9541 aagtgcgtgc ggtactagac gaaaagcgca ttccatatga aattagtcaa tgtacggttc
     9601 aagaagtagc gtcaaaagta agcacatcta agccagacat tattgttagt tcaacaacag
     9661 ttacaggtga tgttggtgat gtaccagttg tcattggaag atcattttta acaggcctaa
     9721 aaaaacaaga agcaatcgat gaaatactcg cgatacttca agattaaagg gagggcacaa
     9781 aatggatatt attctagatt tctttaaata tattatcggg cttggtgtaa cagttatgat
     9841 gccgattatc attaccattc taggtgtgat tttccgcaaa aaaattagtg tagcttttaa
     9901 agcggggcta acagttggtg ttgggtttgt tggactaggc gttatcactt cactcatgtt
     9961 aacgactatt acaccagtta caaaagcact tgtagaaaat tataatttta aattaaccgc
    10021 aacggatatc ggttggggag ttgggtcatc actcgcatgg ggaacagaag tcgtaccatt
    10081 tgttttcgtc gcaattattg caaccaatat tttaatgatt gcctttaaat ggacgaaaac
    10141 aatggacgta gatatttgga attactggca accacttttc atcgccagtg cactttactt
    10201 aacaacagga agcatgatta ttgcgattct tagttcgatt atcaatatgg caattatctt
    10261 caaaatcgct gactggacac aaaaagatgt ggagaatgtt ttaggattag aggggatttc
    10321 tttaccacaa attcaaacta ccgggtgggc gcttgttggt tatccaatga actggctact
    10381 cggaaaaatt cccggcgtta gaaaaattaa ttggtccaca gagaaagtgc aatcacgttt
    10441 aggtattttc ggcgaaccga tgcttatggg cttaattatt ggtggtggac ttgctgccat
    10501 tgctcaaatg ccgctgagcc aagtactgca aaccggagta acgattgccg ctagtttagt
    10561 acttattccg cggatggttt cccttctaat ggacggtctt acggttatct cggaagctgc
    10621 ccatgaattc atggaaaaac gtttcccagg tcgcgaacta tttatcggac tagattcagc
    10681 ggtggggatt ggtcatccat ttgtgctttc gcttggctta ctcatgattc cgattacttt
    10741 gattttagcg ttcattttgc caggaaataa agtattacct ttagctgatt taacggcgct
    10801 tccattctac atgatttttg ctattgttcc atccaaaggg aatttattta gagggatttt
    10861 cacaggtatc gttatcgtca ttatcaccct ctacctatca ggagcagcgg cacctttaat
    10921 gacagaactt gcaggtcaaa ttggttataa tataccgaaa gacgctgtag aagtaacctc
    10981 tctagcagtt gggactcagt ggtatacgtg gattgtatat tacggacttc attggttcgg
    11041 aggtattcta taattgcaat ttaatgaaac aagcattagt ttgcgctaat gcttgtttta
    11101 tttggactaa tgatttttag ctagtagaca acacattgac agttctatat aataataagg
    11161 agaagaaatt agtacggcgg aaggagatag caatggcagg caaaatgaaa cttttttctg
    11221 tgacgagtga gagaccactt gcgacaaaaa ttgcagatta tctagatata cctttatgtg
    11281 aggtggagct ccagaagttc agtgatggag aagtgaaaat taatattgag gaaagtatcc
    11341 gtggaacgaa tgcgtatgtt gtgcaatcaa tgaattccaa cgtaaacgaa cgtctaatgg
    11401 aacttttaat catggtagat gccttaaaac gcgcttccgt gcattccatc aatataatta
    11461 tgccttatta tggctatgct cgtcaggaca gaaaagctcg ctcaagagaa ccaattaccg
    11521 ccaaattaat ggcaaatcta attcaaagag ctggagccga ccgtttaatc acagtagatt
    11581 tacacgcagc tcaaattcaa ggctttttca acattccaat cgatcatctt tcagcaattc
    11641 cgctaattgg tgattatttg atagaaaatt acggtgaaaa agacgtggta gttgtcgcgc
    11701 cggatcacag tggcgtagtt cgcgcacgca gaatcgcgga ccgactaaac gcgccaatcg
    11761 ccattttaaa ccgtaaacca agaccacatg aagacgaaat tatgagtgtc attggcgatg
    11821 tgaaaggcaa agtcgcaatc gttgtcgatg atattatcga taccggcgtc cgtgccacta
    11881 cttcagctga tattttactt gaaaaaggtg ccgtagaagt tatcgcttgc gcaacccact
    11941 ccgtcatggc aggaaatgca accgaacgct tacaaaattc caatatcaaa gaagtcatca
    12001 catcggactc catcgatctt ccagaagata aacaattcga caaactaaca accatctcca
    12061 tcggacgaat cttaggccgc gcaatcgaag gcgtacaaga aaaccgctcg ttgcatccgt
    12121 tgttttaaag aataagcaaa aaacagtaac ttagtagagt tgctgttttt ttgttatctg
    12181 tcgaccttga gtagcgtgaa aaacaccggg aatcgtcaga aatagctctt tgaggtaaga
    12241 tgggagtaag aagaaaagtt agcgggtttt agctacttat tttgaaatgt aaatggactc
    12301 ctcagtcatg atgaagggat tacctttgaa agttttagtt acttaatgtg aaatataaat
    12361 ttggttcctt tggaaaacaa caatagcgtg tagtattgtt tacttactca ttgtgaattg
    12421 taaatgcaga agcagcaaaa taaccaaaag taatgacttt cattttaatt gctt
//
LOCUS       DASDYO010000094        12295 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.094, whole genome shotgun sequence.
ACCESSION   DASDYO010000094 DASDYO010000000
VERSION     DASDYO010000094.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12295
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.094"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            12..404
                     /locus_tag="U0290_002147"
     CDS             12..404
                     /locus_tag="U0290_002147"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464435.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302186.1"
                     /translation="MLLAIDLQSDEPIYTQICNQIIEGMAKRELLPGDKLPSVRSLGA
                     DIGINFHTVNKAYQILKQEGFIQIHRQKGVVIHPDGVAKADELFFAKLQTKLKPLIAE
                     SVVRGVTEEKWLEVSKAIFDEMHGRRVE"
     gene            407..1510
                     /locus_tag="U0290_002148"
     CDS             407..1510
                     /locus_tag="U0290_002148"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464436.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1648 domain-containing protein"
                     /protein_id="HEM2302187.1"
                     /translation="MEIIIYIFVSIAIISLQAITPFVIRKSECFGVNVGERANRNAEL
                     TRLKKQYVGQVVLWTSFVAIIGIALIQGFHSSENMQAGIFIASMFGQLIVSFIIYYRF
                     HHTTLQWKRDKIEAGEISTNSIIMVDTSFHRRKMVISYTWFVVPLLIFIITLAITVVF
                     YPVAPADFPIHFDMSGAVTDTVAKSPRVVLLLPMMQLGMIALFIFINFVIARSKQSVE
                     NENPTDSLKRGLLFRQISSKAMLIMCTIMVIDFLIMQVVTLLALPAEWMMITMIISVV
                     LILFGTVLLAVKVGQGGSRLKFADQPDGVNKPIRDDDSFWKAGVIYFNRNDPALFVEK
                     RFGIGWTINTARPVAWLSFIIIIAVIILISILF"
     gene            1593..2096
                     /locus_tag="U0290_002149"
     CDS             1593..2096
                     /locus_tag="U0290_002149"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464437.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="effector binding domain-containing protein"
                     /protein_id="HEM2302188.1"
                     /translation="MAIRLKRLEEWEGFTGIALVREGLKTEALHTEIKTAFKEMLQLA
                     RELDDFSKQKTFYGISVHNIEDGITHYSVIPVEQKYPHLQEPLEWIEVPAHTYFVAEH
                     IQDTDISESYEEIARAIQEKNYKPYITANNPVFDPLPFKLEVYTKQGSDGANIEIRIP
                     VVKELHT"
     gene            2210..3022
                     /locus_tag="U0290_002150"
     CDS             2210..3022
                     /locus_tag="U0290_002150"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464438.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="formate/nitrite transporter family protein"
                     /protein_id="HEM2302189.1"
                     /translation="MGYYSPQEVTEITIEKGTQKANSSTLTLVLLGFLGGAFISLGYL
                     LYIRAVGTMPHEWGSFATLIGASLFPVGLVCILLGGGELITGNMMAVAIAWYDKKISF
                     QQLLRNWAIVSVMNLVGAFFVAYFFGHFVGLTEGDFLPKTLATAGAKINDPFWVAFVS
                     GIGCNWFVGIAVWLCYAAKDFAGKILGIWFPVMAFVAIGFQHVVANMFIIPAAIFAGY
                     YSWADFIWNIIPVYLGNVVGGAVFVSLFYFIAYKKNAPKKVKEEIHQPIEES"
     gene            3247..4713
                     /locus_tag="U0290_002151"
     CDS             3247..4713
                     /locus_tag="U0290_002151"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464439.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent succinate-semialdehyde
                     dehydrogenase"
                     /protein_id="HEM2302190.1"
                     /translation="MSIKETALPKVQTKLFINGKWTDGDNKETKDIVNPANGEVIAKI
                     AQAGPNETKKAIKAAKEAFPDWAKMELADRVKLLHKIADLMEEKADTLAKIMTLEQGK
                     PLKESKGEVLTGAENFRFAAEEARRLYGETIPAPNNHAFIVKKQPIGVVAAITPWNFP
                     GGMVTRKLAPALATGNTIVLKPSGDTPLSALAIFEIFEEAGLPKGVANIVMGSSKEIG
                     ETLTDSDDVRKLTFTGSTKVGQTLFKQSAETLKKISLELGGHAPFIVFDDANLDAAVN
                     DLVAAKFRNNGQVCVSPNRIFVAKEIKEKFTKALVAKVKQLKVGNGLDDVNVGPLIRE
                     DAIDKIDKQLKNATDKGAKVLTGGGRLTGSDYDKGNFYKPTVLDNVTREMDIFYEETF
                     GPVIPLITFETEDEAIEMANDSEFGLASYFYTKDLARVEKVGAALEYGMVGANEIVIS
                     NPETPFGGVKHSGFGRENGHYGMEEYIQVKFINLKYRD"
     gene            4857..5162
                     /locus_tag="U0290_002152"
     CDS             4857..5162
                     /locus_tag="U0290_002152"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464440.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2302191.1"
                     /translation="MKNILLICGSGASSGFMAAAIRKAAKKRGEQVTVKAASESQIDE
                     RINEIDYLLIGPHLAYMLDDLKQKVADKNVLVSIIPQATYGTLNGEKALDLILTMEG"
     gene            5167..6435
                     /locus_tag="U0290_002153"
     CDS             5167..6435
                     /locus_tag="U0290_002153"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464441.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2302192.1"
                     /translation="MNNKVMDFMTNKFAPKVNKVVKNPWVSAIQDAIMSALPLVFVGS
                     LVTIVSLLKNLFPGMPDFSMISNFSFGMFGLVVAFLIPYYLMEKKGNSSQKLISGATG
                     LVLFLMLLFPTISADGDAVFILSRFGATGMFLSITTGLFVGCVMNFAAKRSFFSEDTP
                     IPDFVVGWFNSLLPITFILIVGWLITVQFNIDFFEVIVAVFSPLASIVQSYPGFVLSV
                     FIPAFLYTFGISGWVMMPAIYPVYMAGLAENSQAVANGASASNIATQETVYALISIGG
                     VGTTLSLSIMMLILSKSLQLKAIGKAVIVPSIFNINEPLFFGAPIAFNPYLMIPTWIN
                     AFLVPSIAYFVMSMNLVSIPAQSFLLWYMPYPVTSYLATQDFRGVIACLAIIVITWLV
                     YLPFFKAYDNSLLKQEKLDAIETEKEMVTN"
     gene            6450..6800
                     /locus_tag="U0290_002154"
     CDS             6450..6800
                     /locus_tag="U0290_002154"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464442.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2302193.1"
                     /translation="MSEQDYVEETDSLNELSMNILIHAGNARNYLVKGLNHLEELAFN
                     EAEEFIASAKKEIVIAHSLQTDTLQLEASGNQIRYSTLFCHAQDTLMTAKSEILIGEH
                     MLRLFKKMTELTKK"
     gene            6812..8263
                     /locus_tag="U0290_002155"
     CDS             6812..8263
                     /locus_tag="U0290_002155"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464443.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2302194.1"
                     /translation="MFENYQFPKDFLWGGAIAANQAEGAFKVDGKGISLADLHKYHKG
                     KTNDEISEEQHKGVSLADIKASMEDKVNYYPKRHGIDFYHTYPEDLALLAEMGFKTFR
                     TSLDWTRIFPTGEETEPNEAGLKYYDQLIDKIIELGMEPIITILHYETPVEIVLNHGG
                     WHNRKVIDLFEKYGKTVLDRYNKKVKYWIIINQINLIQFEPFNSTAIPYDAVDDYLSA
                     TYQAVHNQFVASAKIYEYGKALNPDLMIGTMLADCTAYPFSCDPDDIVLAMKRNRMEY
                     FFADVQFQGEYPQYALNYFDENNIHIEITEDDKAILQKNTMDYLALSYYYSQMVDSKK
                     NDLDPASITPNPHLKANPWGWAVDPKGLYNALSQYWDRYHKPIIIAENGFGMYDKLEN
                     GEIHDDYRIDYLSAHLKEMKRAMYDGVEIIAYCAWGPIDIVSCSSAQMEKRYGFIYVD
                     LDNEGNGTGKRIKKDSFSWYKKVIESNGEDLEA"
     gene            8336..10234
                     /locus_tag="U0290_002156"
     CDS             8336..10234
                     /locus_tag="U0290_002156"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2302195.1"
                     /translation="MDTQKEILAYLHKQENKWVTSNELAAFCECTTRTIRNNISKINE
                     ATPNLIRSAKQGYQINQRIPFELQTESDVTERKSKLLLELIKNSTKGVDLFELADILY
                     ISEVTLKKDIQQLKNELKEADVQIVTSKDRIKLIGKERAKRKYMISLLYEEGGYRESI
                     KSRIQEMIEFVSIDKLQNIVKEVLTEESITTNQYSMMNIVLHYAISIVRIQQGNTLIE
                     TQKTLIRKHSKEYEISKKIAKILSEEYQIHFSEAETKQLGLLYVGLQNEQSANANHGE
                     LDQFVDKKIIEALKSVLANVEETYLIDLQNEQLFIKLAIHVQSLYYRSRYKAYTRNLS
                     LLDIKTSYPVTFDIAVYISSLLQEKLAIDFNEDEISFIALHIGSFLESENRDYIRLEI
                     GLLIEDYHDLRTNMLKKLRARFENEATIKLIENEDSEENFDIILTTNRDIALEKAGSI
                     FIHPLLTTKDIKKISNRIQTKKKILENHLRGQQIDRYIVRSLYANQIDPSELTPAKIR
                     EQMISKMEKQTFVTPEFKEKVEKRERMAPTSFPSGIAIPHSIKNDALQSGVSIMTLQE
                     PIYWNDVKIKIIALVAISKKDATEFNDFFEKFVEIVSEPINTKRLSMAESFEEFIQKL
                     KMMMEESE"
     gene            10527..12098
                     /gene="abc-f"
                     /locus_tag="U0290_002157"
     CDS             10527..12098
                     /gene="abc-f"
                     /locus_tag="U0290_002157"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein"
                     /protein_id="HEM2302196.1"
                     /translation="MSTIEINQLKIEVADRVLVEIPHLLVSKKARIGIIGQNGLGKTT
                     LMEVIAGAKEATSGTVTTQGKLAYIKQLSTDTSTKSGGEKTRKAIQHAMRQNPSVLLA
                     DEPTSNLDVESVKHLERQWSDFHGALIIISHDRTFLDALCTEIWEIKNQKIHVYKGNY
                     HAYLEQKQQQENQAELVYKEFKNKKQQLQASQTHHEIEAGRIVKPGKRLNNKEASAFK
                     AGKGTQQKKQHSTIKALEKRIERLGNVEKPHTTKPIKMITPDNRVIKKGNTILSVKET
                     TYEIAGRKLFETKAFSIKAGDKVALIGENASGKTTFLKEIIQENPNLLCNPQAKIAYF
                     DQELNGLNQTKSLLENISEISVQTKQVNREVLGSMHFKESDLHKEVRMLSGGERVKLL
                     LSMLLVSDANFLILDEPTNYLDIYAMEALETLIKQFAGTVLFVSHDRTFVNHVAEQLL
                     VIENNEMTFHRMTFAEYEESKAPSRITEEDKLILEMRMSEIAAKLMQPNLKPTEKAML
                     EQDYQEIITKRQQFS"
BASE COUNT         4199 a         2265 c         2411 g         3420 t
ORIGIN      
        1 gaggtgtttc tatgctactt gcgattgatc ttcaatcaga cgagccgatt tatacacaaa
       61 tatgcaatca aataattgaa ggtatggcga aacgggaact tttaccaggg gacaaattac
      121 cttctgttcg gagtcttggc gcagatattg gtattaattt tcatacagta aacaaggcct
      181 accaaatttt aaaacaagaa ggatttattc aaatacatcg tcaaaaggga gtagttattc
      241 atccggatgg cgtagctaag gcagatgagc tattttttgc taaattacaa acgaagctaa
      301 aaccactcat cgcggaatcg gttgtgcgcg gtgttaccga agagaagtgg ctcgaagtaa
      361 gtaaggctat ttttgacgaa atgcatggac ggagagtgga gtagaaatgg aaatcatcat
      421 ttatattttt gttagtattg ctatcatttc actgcaagca ataacccctt ttgtaataag
      481 aaaatcagaa tgtttcggag taaatgtagg cgaacgcgct aaccgaaatg cggaattaac
      541 gcggctaaaa aaacaatatg tcgggcaagt ggttttgtgg acctctttcg ttgctattat
      601 cggaatcgca ttaattcaag gctttcattc gagtgagaac atgcaagcgg gtatttttat
      661 tgcttcgatg tttggacaat taatcgtttc ttttattatt tattatcgct ttcaccacac
      721 aactttacag tggaaaagag ataaaataga ggcgggagaa atttcgacta attctatcat
      781 catggtagat actagttttc atcgcagaaa aatggttatc tcgtatacat ggtttgtcgt
      841 gccactgctt atcttcatta ttacacttgc gattacggtc gttttttatc cagtagctcc
      901 tgctgacttt ccaatccatt ttgatatgag tggggcagtg acggatacgg ttgccaaatc
      961 acctagagtc gtattgctat taccgatgat gcagctagga atgattgcgt tatttatctt
     1021 tattaacttt gttattgcta ggagcaaaca gtccgtagag aacgaaaacc ctactgattc
     1081 attaaaaagg ggactcctat ttagacagat ttctagtaaa gcaatgttaa ttatgtgtac
     1141 gattatggta attgattttc tcatcatgca agtagtcaca ttactagcac ttccagctga
     1201 atggatgatg ataacaatga taatttctgt tgttttgatt ctgtttggaa ccgtccttct
     1261 tgctgtaaaa gtagggcaag gcggaagcag acttaaattt gctgaccaac ctgatggtgt
     1321 caataagcca attcgggatg atgattcttt ttggaaagca ggggttattt attttaatcg
     1381 aaatgatcca gctttatttg tagaaaaacg ctttgggatt ggttggacga ttaacacagc
     1441 tcgccctgtt gcttggttat cttttatcat tattatcgct gttattattc tcattagcat
     1501 cttgttttaa cttgctctca gacgggtatt taccatatgg tatacggata aattagcttg
     1561 tgtgagatgc ttttgtgaag gagtagataa tcatggcgat tagattaaag cgactggagg
     1621 aatgggaagg attcactggt attgcgctcg ttcgagaagg tcttaaaaca gaagcacttc
     1681 atacagaaat aaaaacagcc ttcaaagaaa tgcttcaact tgcgcgagaa ctagatgatt
     1741 tttccaaaca aaaaacgttt tatggtattt ctgtccataa tatagaagac ggaattactc
     1801 attattcggt aattccagtg gaacaaaaat atcctcattt acaagaaccg cttgagtgga
     1861 ttgaagttcc ggctcatacg tattttgtgg ctgagcatat tcaggataca gacataagtg
     1921 aaagttatga agagattgcc agagccattc aagaaaaaaa ttacaaacca tatattacag
     1981 cgaacaaccc cgtttttgac ccactaccat tcaaattgga agtgtatacg aaacaaggaa
     2041 gcgacggagc aaatattgaa ataaggattc ctgttgtaaa agaattgcat acgtaagaag
     2101 aagcctggga cttttgttct gggctttttt atactagcaa gctgtttttg agtgtgctat
     2161 aataaaaacg ctattttgtg attattttaa caagaaggaa gggattcatg tgggatatta
     2221 tagcccgcag gaagtaacag agattacgat tgaaaaaggg acccaaaaag caaattcaag
     2281 tacgttaacg cttgtgttgt taggcttttt aggtggggcc tttatatctc ttggttactt
     2341 attatacata cgtgcagtag gaacaatgcc tcacgaatgg ggaagctttg caacgcttat
     2401 cggcgccagt ctttttccgg ttggcctcgt ttgtattttg ctaggtggag gagaattaat
     2461 taccggcaac atgatggctg tcgcgattgc ttggtacgac aaaaagattt ccttccaaca
     2521 attacttaga aactgggcga ttgtgtctgt catgaactta gtgggcgcat tttttgtcgc
     2581 ttacttcttc ggacatttcg ttggcttaac agaaggcgat ttcttaccaa aaacgctagc
     2641 tacagctggc gcaaaaatta acgatccttt ctgggttgct tttgtttccg gaattggttg
     2701 taactggttt gttgggattg cggtttggct ttgctacgcg gctaaagatt tcgcaggaaa
     2761 aatccttggt atttggttcc cggttatggc atttgttgct atcggatttc agcacgttgt
     2821 cgccaacatg tttattatcc cagctgcgat tttcgctggt tactattcat gggcggattt
     2881 catttggaac atcatcccag tttacttagg aaatgtagtc ggtggagcag tttttgttag
     2941 cttattctac ttcattgctt ataagaaaaa cgcacctaaa aaagtaaaag aagaaataca
     3001 ccaaccaatt gaagaaagtt aagaccgaaa aagctagtta cattcgatgt agctagcttt
     3061 ttttgaaaaa aattaaagtt ttttagagac tgttctcgtt cccgccatgt tgggatagaa
     3121 tgactttttc caaaaaccat tttgccactt gaaaaagaaa atcctgatta aatttttcga
     3181 tttgtggaaa acactattat aagcaacgag agcacgtgca gaaaaatttt ttgaggagtg
     3241 gtatttttga gtattaaaga aacagcctta ccaaaagttc aaacaaaatt atttattaat
     3301 ggaaaatgga cggatggaga taataaagaa acaaaagata ttgtaaaccc agcaaatgga
     3361 gaagttattg ccaaaatcgc tcaagctgga ccaaacgaaa ccaaaaaagc cattaaagct
     3421 gcaaaagaag catttcctga ttgggcaaaa atggaactag ctgatcgcgt caaattatta
     3481 cacaaaattg ccgatttaat ggaagaaaaa gcagatacac tagcaaaaat tatgacgctt
     3541 gaacaaggta aaccgctaaa agaatcaaaa ggagaagtcc taactggcgc agaaaacttc
     3601 cgattcgctg cagaagaagc aagaagatta tatggggaaa ctatcccagc gccaaacaat
     3661 cacgcgttta tcgtcaaaaa acaaccaatt ggtgtagttg cggccattac tccgtggaat
     3721 ttcccaggtg gtatggtgac acgaaaactt gctccagcgc ttgcaaccgg aaatacaatc
     3781 gtattaaaac cttccggaga tacgccgctt tcagccctag ctatctttga aatttttgaa
     3841 gaagccggct tgccaaaagg tgttgccaat atcgttatgg gtagctccaa agaaatcggc
     3901 gaaacattaa ctgacagtga tgatgttcgt aaactaactt tcaccggctc cacgaaagtc
     3961 ggtcaaacac tattcaaaca atcagccgaa acactgaaaa aaatctcgct cgaacttggt
     4021 ggacatgcgc catttatcgt atttgatgat gcaaacctgg atgctgctgt aaatgattta
     4081 gttgccgcaa aattccgcaa taacggtcaa gtatgtgtat cgccaaaccg aatttttgtt
     4141 gccaaagaaa ttaaagaaaa attcactaag gcgctagttg ctaaagtaaa acaactaaaa
     4201 gtaggtaacg gtttagatga tgtgaatgtt ggtccactta tccgtgaaga tgcgattgac
     4261 aaaatcgaca aacaacttaa aaatgccaca gataaaggtg ccaaagtcct aactggcggc
     4321 ggtcgtttaa caggttccga ctatgacaaa ggcaacttct acaaaccaac tgtcttagat
     4381 aacgttactc gtgaaatgga cattttttat gaggaaacat ttggtccagt aatcccgctt
     4441 atcacatttg aaacggaaga cgaagcaatc gaaatggcga atgacagtga attcggtctt
     4501 gcttcttact tctacactaa agatttagca cgcgtagaaa aagtgggagc agcactagaa
     4561 tacggaatgg tcggagcaaa tgaaattgtc atctctaatc cggaaactcc atttggcggc
     4621 gttaaacatt ctggtttcgg tcgcgaaaat ggccactacg gaatggaaga atacatccaa
     4681 gtgaaattca ttaacttaaa atatcgtgac taacacaagc tattaagaaa ctcctttgct
     4741 tcaagcaaag gggtttcttt tttatgcagt ttcctaccag taggaaaaaa acatatttgt
     4801 aagcggattc agctgtttat ataataaaag taagttaagg aaagggagga tacaaaatga
     4861 aaaacatttt actcatttgt gggtcaggag cttcaagtgg attcatggca gcagcaatca
     4921 gaaaagcagc aaaaaaacgt ggagaacaag tgacggtgaa agcagccagt gagtcacaaa
     4981 tagatgaaag aattaatgaa attgattact tattaatcgg gccgcactta gcttatatgc
     5041 tggatgactt aaaacaaaaa gtagccgata aaaatgtttt agtatcaatt attccgcaag
     5101 caacttatgg cacacttaac ggtgaaaaag cactcgatct cattttaact atggagggat
     5161 aacacgatga acaacaaagt gatggatttt atgacaaata aatttgctcc caaagtaaat
     5221 aaagttgtta aaaatccttg ggtatcagca attcaagatg caattatgtc tgcgcttccg
     5281 ctcgtttttg tcggttcttt agtcaccatc gtttcactac ttaaaaattt atttccgggc
     5341 atgcctgatt tttcgatgat aagtaatttt tcgtttggca tgtttgggtt agtcgtggcc
     5401 tttttaatcc catattatct gatggagaaa aaaggaaata gcagccaaaa attaatttct
     5461 ggcgcaactg gacttgttct atttttaatg ctactatttc caactatttc agcagacggg
     5521 gatgccgttt tcattttatc tagatttgga gcgacaggga tgttcttatc cattacaacc
     5581 ggattatttg ttggttgtgt gatgaacttt gctgcgaaac gatcattttt cagtgaagat
     5641 acaccgattc cggattttgt cgttggttgg ttcaatagct tgctaccaat tacatttatt
     5701 ctgattgttg gttggttaat aactgttcaa tttaatattg atttctttga agtgattgtg
     5761 gcagtgttta gtccactcgc gtcaatcgta caatcttatc caggctttgt gctttcggtt
     5821 ttcattccag catttcttta tacattcggg atttctgggt gggttatgat gcccgcgatt
     5881 tacccggttt atatggcagg actcgcagaa aactcacaag ctgtagcaaa tggcgcaagt
     5941 gcatcgaaca tcgcaacaca agaaactgta tacgcattaa tttcaatcgg cggggtcggc
     6001 acaaccttat cactatccat tatgatgctc attttaagta agtctttaca gctaaaagca
     6061 atcggaaaag cagttattgt cccatcgatt tttaatatca acgaaccatt atttttcggg
     6121 gcaccaattg ccttcaaccc atacttaatg attccaacgt ggattaatgc tttcttggtt
     6181 ccaagcatcg cctatttcgt tatgtcgatg aacttagtaa gtattcccgc gcaatcgttc
     6241 ttgctatggt acatgcctta tcctgtaacg tcttaccttg caacacaaga tttccgaggt
     6301 gtgattgctt gtttagcaat tatcgtcatc acatggcttg tctacttgcc gttctttaaa
     6361 gcatacgaca actccttact caaacaagaa aaattagatg caatcgaaac agagaaagaa
     6421 atggtaacaa attgattgga ggaactaaaa tgtcagagca agactatgtt gaagaaacag
     6481 atagcttaaa tgaactatcc atgaatatat taatccatgc tggaaacgca agaaattacc
     6541 tagtgaaagg tcttaaccat ttagaggaac tagcgtttaa cgaagccgag gaatttatcg
     6601 cctctgccaa aaaagaaatt gtcatcgcgc atagtctgca aacagataca cttcaattag
     6661 aagcatcagg caatcaaatc cgttattcca cgctgttctg tcatgcgcaa gatacactca
     6721 tgacagccaa aagtgaaata ttaatcggcg agcatatgct acgtttattc aaaaaaatga
     6781 ccgaacttac gaaaaaatag gaggtacgag catgtttgaa aattatcaat ttccaaaaga
     6841 ctttttatgg ggaggagcta tcgcagccaa ccaagcagaa ggcgcattta aagtagatgg
     6901 aaaaggaatt agtttagcag atttgcacaa atatcataaa gggaaaacaa atgatgaaat
     6961 cagtgaggaa caacataaag gtgtaagttt ggctgatatc aaagcaagta tggaagacaa
     7021 agtgaactat tatccgaaac gccacggtat cgacttttat cacacgtatc cagaagattt
     7081 ggctttgctt gctgaaatgg gctttaaaac atttcgaact tcgctggact ggacacggat
     7141 ttttccaact ggcgaagaaa cagaaccaaa tgaagcggga ttaaaatatt atgaccaatt
     7201 aattgataaa attatcgaac ttggcatgga gccaattatt acgatattac attacgaaac
     7261 gccggtggaa attgtcttaa atcatggcgg ttggcataat cgtaaagtta ttgatttatt
     7321 tgagaagtac ggcaaaacgg tacttgatcg ctacaataaa aaagtaaaat attggattat
     7381 cattaaccaa attaatttaa ttcaattcga accatttaac tctactgcga ttccatatga
     7441 tgccgtcgat gattatttat ccgctacgta tcaagctgtt cataaccaat ttgttgcaag
     7501 tgcgaaaatt tacgaatacg gaaaagcgct aaatcctgat ttaatgattg gtacaatgct
     7561 cgctgattgc acagcctatc cattctcctg cgatccagat gatatcgtac tcgcaatgaa
     7621 acgcaaccgc atggaatatt tcttcgcaga cgtgcagttc caaggcgaat atccacagta
     7681 tgcgcttaat tactttgacg aaaataatat tcatatagaa atcacagaag acgacaaagc
     7741 cattttacaa aaaaacacca tggattattt agcactttcc tattattatt cccaaatggt
     7801 ggactccaag aaaaatgatt tggacccagc ttcgattaca ccaaacccgc atcttaaagc
     7861 taatccgtgg ggctgggcag tcgatccgaa aggcttgtat aacgcattgt cgcagtactg
     7921 ggacagatat cataaaccaa ttatcattgc cgaaaatggt tttggaatgt atgacaaatt
     7981 agaaaatggc gaaatccatg atgattaccg gattgattat ttatccgcgc atctaaaaga
     8041 aatgaaacgc gccatgtatg acggcgtaga aattatcgca tattgcgctt ggggaccgat
     8101 tgatatagtt agttgctcct ccgcacaaat ggaaaaaaga tacggtttca tttacgttga
     8161 tttagataac gaaggaaacg gtacaggcaa aagaattaaa aaagacagct tttcatggta
     8221 taaaaaagta atagagtcta atggggaaga cttagaagct taatgtaaca gagcgccagt
     8281 tgtggtagtt gatagctaat acaactggct ttcgatatat agggggtaac aaaaaatgga
     8341 tactcaaaaa gaaatactag cttatttgca taaacaggaa aataagtggg ttacctcaaa
     8401 tgagttagca gctttttgcg agtgtacaac acgaaccatt cgcaacaaca tttctaaaat
     8461 aaatgaagcg acaccgaatt taattcgttc tgcaaaacaa ggctatcaaa tcaaccagcg
     8521 tattccattt gaacttcaga cagaaagtga tgtaacagaa cgaaagtcaa aactcttact
     8581 cgaattaatt aaaaactcta ctaaaggcgt tgacctgttt gaacttgcgg atattttata
     8641 tatttcagaa gtaaccttaa aaaaagacat ccaacaatta aaaaacgaac taaaagaagc
     8701 cgatgtccaa atcgtcacca gtaaagaccg aatcaaatta atcggaaaag aacgtgccaa
     8761 acgaaaatat atgatttcct tgctatatga agaaggcgga taccgtgaaa gtatcaaaag
     8821 tcgcattcaa gaaatgattg aatttgtttc tatcgataaa ctgcaaaaca tcgtaaaaga
     8881 agttttaacg gaagaatcca ttacaaccaa tcaatattcg atgatgaaca ttgtcttaca
     8941 ttacgccatt agcatcgtcc gaattcaaca aggaaataca ctcattgaaa cccaaaaaac
     9001 actcatccga aaacactcca aagaatacga aatatcgaaa aaaattgcta aaattctctc
     9061 ggaagaatac caaatccatt tttcagaggc agagacaaaa caactcggac ttttatatgt
     9121 tggcttgcaa aatgaacaat ctgctaatgc caatcatggc gaactggacc aatttgtcga
     9181 taaaaaaatc atcgaagcac ttaaaagcgt gctcgccaat gtggaagaaa cctatctcat
     9241 cgatctccaa aatgagcaac tttttatcaa gctagcgatt cacgtccaaa gcctatacta
     9301 tcgctcacgt tacaaagcgt acaccagaaa tttaagctta cttgatatta aaacgtctta
     9361 cccagtaact tttgatattg ctgtttacat ttcttctttg ctacaagaaa aactagcgat
     9421 tgactttaac gaagatgaaa tttcttttat cgcgctgcat atcggctctt ttctagaaag
     9481 tgaaaaccga gattatattc gcttagaaat aggcctactt attgaggatt atcacgattt
     9541 aagaacaaat atgctgaaaa aactgcgcgc acgatttgaa aatgaagcta ccatcaaact
     9601 gatagaaaac gaggactctg aagaaaattt tgatatcatt ttaacaacaa accgagatat
     9661 tgctcttgaa aaagcgggtt ccatttttat tcatccctta ctaacgacga aggatatcaa
     9721 gaaaatcagc aatcgaatcc aaacaaagaa aaaaatcttg gaaaatcact tgcgaggtca
     9781 acaaattgat cgctacatcg ttcgttccct ctacgccaac caaattgacc cctcagaact
     9841 gacacccgca aaaatcagag agcaaatgat ttctaaaatg gaaaaacaaa ccttcgtcac
     9901 gccggaattt aaagaaaaag tcgaaaaaag ggaacgaatg gcgccaacaa gcttcccatc
     9961 cggcattgct ataccacatt ctatcaagaa tgatgccctt caaagtggtg tatctataat
    10021 gacgctacaa gagccgattt attggaatga cgtcaaaata aaaataattg ctctcgtcgc
    10081 catcagcaaa aaagatgcaa cagagttcaa tgattttttt gaaaagtttg tagaaatcgt
    10141 ctccgaaccg attaatacta aacgtttatc aatggccgaa agtttcgagg agttcatcca
    10201 aaaactaaaa atgatgatgg aagaaagtga gtaaatggcc acacataagc cgtgtaattc
    10261 tatttacacg gcttataaag gttgaagtga cgataaaatt acgctataat ataaccatca
    10321 aacgaaaagg agtgttatct taagccaatg aaattctaat cctgtattat atgaaaaaat
    10381 gaagaaagct atccaattct cggatagaaa ctattttttc ggacgggatt cgtatgttca
    10441 tttcgcatga taactctttg ctacaggcct ttttttggcg tagcctcgcg gattcctctc
    10501 tgaaaatatt caggaggtta ttttttatgt ctacaatcga aataaatcaa ttaaaaatag
    10561 aagtagcaga tagagtttta gtagaaattc ctcatctgct agttagtaaa aaagcaagaa
    10621 tcggcatcat cggtcaaaat ggtctaggaa aaacaacgct aatggaagtg attgctggcg
    10681 ctaaagaagc aacatctggc acggtgacta cccaaggaaa acttgcttac atcaaacaac
    10741 tttccactga tacaagtacg aaaagcggcg gcgaaaaaac aagaaaagca attcaacatg
    10801 cgatgcgcca aaacccaagt gttctcctag cagatgaacc gacaagcaac ctcgatgtcg
    10861 aaagcgtcaa acatttagaa cgtcagtgga gcgatttcca cggtgcgctc ataattatat
    10921 cgcatgaccg taccttttta gatgcacttt gtacagaaat atgggaaatc aaaaaccaaa
    10981 aaattcacgt atacaaagga aactaccacg cgtatttaga acaaaaacaa caacaagaaa
    11041 accaagcgga actcgtatac aaagaattta aaaacaaaaa gcaacaacta caagcctccc
    11101 aaacacacca tgaaatcgaa gcaggtcgca ttgtcaaacc tggaaaacgc ctaaacaaca
    11161 aagaagccag cgcgtttaaa gccggaaaag gcacacaaca aaagaaacaa cacagtacca
    11221 tcaaagcttt agaaaaacga attgaacggc tcggcaatgt cgaaaaacca catacaacta
    11281 aaccaatcaa aatgatcacc ccagacaatc gcgtcataaa aaaaggtaat acgatactaa
    11341 gtgtcaaaga aacaacctac gagatcgcag gacgaaaact atttgaaaca aaagcttttt
    11401 ctattaaagc aggggataaa gtggcgctaa tcggtgaaaa tgcgagcggg aaaactacat
    11461 ttttaaaaga aataatccaa gaaaatccta atctcctatg taatccccaa gcgaaaattg
    11521 cttatttcga ccaagaattg aatggattaa accaaacgaa atccctgtta gaaaacatct
    11581 cggaaattag cgttcaaacc aagcaagtaa acagagaagt actaggtagc atgcatttta
    11641 aagaaagcga tttgcataag gaagtgcgca tgctctctgg cggggaacga gtgaagttgc
    11701 tgctcagtat gctcctcgtt agtgacgcca atttcttgat tcttgatgaa ccaaccaact
    11761 atttggatat ctatgcaatg gaagcgctgg aaacgttaat caaacaattt gcggggacag
    11821 tactattcgt ttcgcatgat agaacttttg ttaaccacgt ggcagaacaa ttactcgtca
    11881 tcgaaaataa tgaaatgact ttccaccgga tgactttcgc ggaatatgaa gaaagtaaag
    11941 cgccaagtcg catcacagaa gaagataagt tgattttaga aatgcgcatg tcagaaattg
    12001 cagccaagct tatgcaaccg aatttaaagc ccacagaaaa agccatgctc gaacaagatt
    12061 atcaagaaat tatcacaaaa agacaacaat ttagttaaat tgttgtcttt ttattcaagc
    12121 taaataaaaa atatagtcat ttatatttta cttgatttct gcaaaagata ggcttagaat
    12181 caaatagtta ttaaaaagag taaagaaaga aggaatccca tgtttagtca tcttccggat
    12241 tcattcctcc aaatgaatac catttttatt tctattttga ttgaggcact gccgt
//
LOCUS       DASDYO010000095        12222 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.095, whole genome shotgun sequence.
ACCESSION   DASDYO010000095 DASDYO010000000
VERSION     DASDYO010000095.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12222)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12222)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12222
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.095"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            169..6807
                     /locus_tag="U0290_002158"
     CDS             169..6807
                     /locus_tag="U0290_002158"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725160.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
                     /protein_id="HEM2302197.1"
                     /translation="MKIHAKAKKILVSLIAIMLFLSLIPGYAPMAEETSTGVAEPEKK
                     AGEQAPTEVKDERTENEVVFDNHDGSFTKQIFADPINMEVDGEMKRIDANVEKEADSD
                     MIVPKQTPLELGFLDKMEDGAYQKLTKAGAEVTFRLKGARTGENEQAVTDQPATYKEN
                     EVTYENVFPKTDLRHLTFPQSVKEDIVLHEPNQVDTYVYQIETKLGLELAKNGDVLFK
                     NKSGETMYTLPKPVMTDSNVGAETGEAALSENVSFEVKQLTKTVYELQLKVDTAWLND
                     AAREYPVYIDPSVRLDEVYNANINSAKPTETNIGSKLWDSGQNAYTLKLGKWDNSTGN
                     NAAYLKMDTSTLNKATISKATLKVYNIWHMSPTVKNDLWYYESNANWSPWQVTWNTAP
                     ATTRIGSVNVGRGEWANLDVTKTVQAWASGVRPNNGFRLATNIDQNYWKKLVASENNK
                     NYPYLEVNYTYAQPEKPTVKTNSNGVGTGTGYMDLSWKAVPGATSYNIVISNGYNYEY
                     INTKSTATTWSTKGKKIFPTNDEIANGEFEFHHDGKGTEFALDPRAQYENAFQAGSTF
                     GLRNLTRYLFRVQAVFPGGESPNSDLVFAYMPIEKPQPPAAKAYSNLAHKETGYVELN
                     WEKSPMADGYKVLVFNGKAYEEYDVGAETKWTTQNKGIWPTKEEIAEGKFALHHDGKG
                     DELAKDPSPVYTNSGGNYKERTNYWFRIVAYQKAGNNATSIQSEPATPSLPEVVNKQL
                     GMVDYWTSVPVRGGEVNATNGNFLFHETDFNLEGRGPSINVDRTFNSQDDATGIFGKG
                     WTSTLEEKLIEEENGNIVWVESDKKVHRFTKKGDKYEAPPGIYSEITKNADGYLKIEE
                     DKSETRFLADGRLKSEKDTKGNELTYEYTDGKLTNMRDASGRTVTLAYEGELVKELVG
                     PEDRKISYTYNDKQELISSSTARGKIYCYGYTDGLLTSIYDPKHTEEKPYETTFAYEE
                     EKLTEITDPVGKKTTLSYDMEEQQTTLTNEKKKKTIYSYNDAGNPKKEIVDADGLKLT
                     TTYTYESNNLVKEVNPKGQEETYSYDADGNITQATDAYGTESYTYNGNNDVTSATDTE
                     GRKTTVTYDGADAVSETLATESQVSSVTQYDAYGNPIRGSGELSSAGNLLQNSGFEKG
                     AGVSNWTLIQSDAKGSMTFDSTQSAPGTLGGSGSVKLTSEANSTVKGYSSVTQRVDVE
                     PETTYTFSAWIKTSGMTNADAILIGRLQDANAKDITDAGVWQSNRATSIKKNGGWVKR
                     QLTFKTSKNTRQVLLYLDNEQPAPHKGKGTIWYDNVQFEKGSVASSYNPVVNSSFEEH
                     NGTLPTGWARSGNTALTQAKVVDNEGYSGDSAVYFERKATSEAYTHIAQDVPVNQKEA
                     KALTISALSKSEDAKSNGSVATMSNDYSVWGTINYQDGTTSSVQGQFPLGTNDWNRSA
                     VVIKPTKPIKSVKVYTMFRNGLTGKAWFDDVRVIEGEVLTKNEYDASGNYVTASYDEE
                     GRKISFTYDIYGNKTSETDEKGNKKTLTYDADNALIDTKLANGTSVAYKYDDNGNTTE
                     KNVTASGKTQKNIYEYDVDNKITAFTDALNRTIKYEYDAAGNKTKAIMPNGRVTESTY
                     DSADRMDGIKWNDKLAFKFQYDPNGNQTKVTDEINSIVTDKTYDDANRITKVAERGGD
                     VSYTYKDKPTKDNKGKTDKVGEVAINHGDYTAKTSYTYNDLDRNTRVNDGSKNAYFEF
                     DEFGNINVYTAGNGTAANYTYDSTQKVTNAAISSASGTQILDENYTYDAASNRTSIDN
                     KQDGKTTYEYDAVNQLTKETLPDGTVKAYTYDGFGNRTQVAISGNETKTIAASYNDGN
                     QLVSWNGEALTYDANGNRTSDGKYTYTWDTGDRLSSITKKGESEPFTSYTYDDDDRRL
                     SKTVDGVTTNYHYDGDSIDVLYETDGDGKVVRQYVYSDDNVRLAMKMNGKTLYYHYNA
                     HGDVIALTDEAGKIVAEYAYDAWGNVLKNTASTEEAKANPYGYAGYTYDKEIEQYYLM
                     ARYYEPEQGVFTAYDPDPGDEDDPQTMNGYNYANNNPVMMVDPDGNFPLAIPAVYWGV
                     SGAIAAAPFVGYGIGAAGTKIWNNTKKVNRGYKFLWNNRKQIARKVYKSTRIKWGHIK
                     NRHSPKSSIKKKGKFRNNRTLKRTTRATLRSGKARPGEKGRTILEKTFKERVGVNRDG
                     DPSYRVRVIRAPNGKVITSYPI"
     gene            6824..7612
                     /locus_tag="U0290_002159"
     CDS             6824..7612
                     /locus_tag="U0290_002159"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302198.1"
                     /translation="MLKIKKQAQSIYAFKETGGEVLNFQIEKNCLKLFSGEEISCEIN
                     DEIISDRYFKVKEVKLSDEKVCIFCHDGVYDYLLISCIGKHFKYPLGEGVADFLVLND
                     EAYVIYSEEGMFGSEENLPIAQLGLIKIDIFTGEITGLLDDSILETLIDVQSMSCKNK
                     RIRILCYEENDDDFTLDYDLTSKKVQNKVVINYTVDELLSVGDNFYARYQNHIYKVDE
                     SMEITKEIIIDKKVYDEAYAISTGYSEVVLESENEFNIVQLSKL"
     gene            7749..8204
                     /locus_tag="U0290_002160"
     CDS             7749..8204
                     /locus_tag="U0290_002160"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RHS repeat-associated core domain-containing
                     protein"
                     /protein_id="HEM2302199.1"
                     /translation="MTTNYHYNADDDVIALTEEAGKVVAEYAYDAWGNVLKNTASTEE
                     AKANSYGYKGYTYDKEIKQYYLMARYYEPEQVAFTAVDPDPGDEDDPQTMNGYNYASN
                     NPVMLADPDVLWAGVLFRFAAKGGKTAWKYAKKGAKKSFKEHEKMVEGI"
     gene            8286..8498
                     /locus_tag="U0290_002161"
     CDS             8286..8498
                     /locus_tag="U0290_002161"
                     /inference="COORDINATES: protein motif:HMM:NF026872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302200.1"
                     /translation="MRKKHDWNSITDGSWGQVRNLINRTMRNGKESAYGSARQKTMKY
                     GKRTIVVTFKRVEGKIRISDAWVKTK"
     gene            8525..9088
                     /locus_tag="U0290_002162"
     CDS             8525..9088
                     /locus_tag="U0290_002162"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302201.1"
                     /translation="MLNLQWEDLDCLEVEGDLEKILDYSYNAWNLDQRNTRYFVRTFF
                     IKWYLIIDDFDIEDYETQEKQLMNMYEYGEKKLLDVTEVKWIIGYCISLNPEYFMKQG
                     DNYEEVRIKGDKYLHELALANPDDIYLKSLDYDFGTEGHSHERYLDWKRANREQFLLY
                     VEENFNYDSLFSDCFKELITMDLDKKD"
     gene            9365..10267
                     /locus_tag="U0290_002163"
     CDS             9365..10267
                     /locus_tag="U0290_002163"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302202.1"
                     /translation="MSKTVDGVTTNYHYDGDSINVLYETNNDGKVVRQYVYSDDGIRL
                     AMKMNGKSLYYHYNADDDVIALTDEAGKIVAEYTYDAWGNVLKNNASTEEAKANSYGY
                     KGYTYDKEIEQYYLMARYYEPEQGVFTAVDPDPGDEDDPQTMNGYNYASNNPVMLADP
                     DGLWAGVLFKFAAKGGKTAWKYAKKGAKKVSKSMKKWWKGFKAKPKKRQETKQTNSQL
                     KSFDSDKRKHITEPEHQWNSVSDGSWGQVQALIKRTMRSGKESSYKKSARKKTLIYNK
                     RKIIVTFVRKDGKIKIGNAWVERK"
     gene            10299..10913
                     /locus_tag="U0290_002164"
     CDS             10299..10913
                     /locus_tag="U0290_002164"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003770430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302203.1"
                     /translation="MINLEWEELDRLEVDGKLEQILKFSYDAWISDPKNTHFFVRAFF
                     LKWYLQIDNFDIESYEEQDEKLRYMYSYGEQELLDIPEVKWIMGYCLSLNPECFMGEE
                     DYDDLRLKGKKYLREASLANPEDVFLKDSYYASGGKSVKEFVKWESENREQLANYLQA
                     NFNYDSLFSDYFKEMVTMYISGKIQEKGILERLFSKLKKKDKGN"
     gene            11236..11826
                     /locus_tag="U0290_002165"
                     /pseudo
     CDS             11236..11826
                     /locus_tag="U0290_002165"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738130.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT         4563 a         2035 c         2684 g         2940 t
ORIGIN      
        1 acatgctata ataattttgt aatattagga aaaggaccag ttttatctca attaaaactg
       61 gtcctttttt agaaagagag ggcagtgaag ttgttagcgg caagttaaaa aaagagaaat
      121 tagcaaggca tcgaatgaaa ttacattgaa aaagggagag cttgacacat gaaaatacat
      181 gcaaaagcaa aaaaaatctt agtgagccta atagctatta tgctatttct ttcactaata
      241 cctggttatg caccaatggc ggaggagacg tcaactgggg tagcagaacc agaaaagaaa
      301 gcgggagaac aagcaccaac agaagtgaaa gacgaacgaa cagaaaatga agtggttttt
      361 gataatcacg acgggagctt tacaaaacaa atctttgcgg atcctatcaa tatggaagtt
      421 gatggcgaga tgaaacgcat cgatgcgaat gtggagaaag aagcagattc tgacatgatt
      481 gttccaaaac aaaccccatt agaactaggc ttcttagaca aaatggaaga cggcgcatac
      541 cagaaactaa caaaagctgg cgcagaagtt acttttcgct taaaaggagc acgtacaggc
      601 gaaaatgaac aagcagtcac agaccaacca gcgacctaca aagaaaatga agttacttat
      661 gaaaatgtat ttcctaaaac agatttacgt catttaactt ttccacaatc agtaaaagaa
      721 gacatcgtgc tacatgaacc taatcaagta gatacgtatg tttatcaaat agaaacaaaa
      781 ctaggtttag agctggcaaa gaatggcgat gtgctattca aaaataaatc tggcgaaaca
      841 atgtatacgc ttccgaaacc agttatgaca gattccaatg tcggcgctga gaccggggaa
      901 gcagcgttat ccgagaatgt ttcctttgaa gtgaagcaac taaccaaaac agtctatgag
      961 ctacaattaa aagtagatac agcatggcta aatgatgccg cgcgcgaata tcctgtctat
     1021 attgatccat ctgtccggtt agatgaagtg tataatgcca acatcaattc agctaaacca
     1081 acagaaacca atatcgggag caagctttgg gattctggcc aaaatgctta cacgttaaaa
     1141 cttggtaaat gggacaattc aacaggaaat aatgccgcct atttaaaaat ggacacgtct
     1201 actttaaata aagcgacgat ttctaaagca acgctaaaag tgtataacat ttggcatatg
     1261 tccccaacag ttaaaaatga tctttggtac tatgaatcta atgcgaactg gtccccatgg
     1321 caagtgacat ggaatacagc tcctgcaacg acacggattg gaagcgtcaa tgtcggccga
     1381 ggtgagtggg cgaatttaga tgtcactaaa acagttcaag catgggcaag tggcgtgcga
     1441 ccaaataacg gtttccgtct agctacgaac atcgatcaaa actattggaa aaaattagta
     1501 gcaagtgaaa ataataaaaa ctatccttat ctagaagtaa attatacgta tgctcaaccg
     1561 gaaaaaccta ctgttaaaac gaattcgaat ggagtaggaa ctggaacagg ttacatggat
     1621 ttatcttgga aggctgttcc tggtgcaacg agttataata tcgttatttc taatggatat
     1681 aactacgaat atattaatac aaaaagcacc gcaaccactt ggagcactaa agggaagaaa
     1741 attttcccaa caaatgacga aatcgctaat ggagaattcg aattccacca tgatggcaaa
     1801 ggaaccgaat tcgctcttga tccgcgagcg caatatgaaa atgcgtttca agctggaagt
     1861 acttttggac tgcgcaattt aacgcgctat ttattcagag tgcaagccgt tttcccgggt
     1921 ggagaaagtc cgaattccga cttagtattt gcctatatgc caatcgaaaa accacaaccc
     1981 cctgctgcga aagcatattc taacttagct cataaagaaa caggatacgt ggaacttaac
     2041 tgggaaaaga gcccaatggc ggatggctat aaagtacttg tcttcaatgg gaaagcctac
     2101 gaagaatacg atgttggcgc agaaacaaag tggaccaccc aaaataaagg gatttggcca
     2161 accaaagaag aaattgcaga aggtaaattc gctcttcatc atgacggaaa aggcgatgaa
     2221 ctagcaaaag atccttctcc agtttatacc aattctggcg gtaattataa agaacgaaca
     2281 aactactggt tccgaattgt tgcgtaccaa aaagcgggaa ataatgccac aagtattcaa
     2341 tccgaaccag cgacaccatc ccttccagaa gtagtaaata aacagctagg aatggtagat
     2401 tactggacaa gtgtgccggt acgtggcggc gaagtaaacg ctacaaatgg aaacttttta
     2461 ttccatgaaa cagattttaa cttagaaggc cgcggcccga gcatcaatgt cgaccgtact
     2521 tttaacagtc aagatgacgc aacaggcatt tttggtaaag gctggacaag tacgcttgaa
     2581 gagaaactta ttgaagaaga aaacggaaat atcgtatggg tggaatcgga caagaaagtc
     2641 catcgtttca ctaaaaaagg tgataaatac gaggctccac caggcattta ctccgagatt
     2701 actaaaaacg cagatggcta tttgaaaata gaagaagata agtcagaaac gcgcttttta
     2761 gctgatggac gattaaaatc cgaaaaagat acaaaaggca acgaattaac ttacgaatat
     2821 actgacggca aactaacaaa catgcgcgac gcttccggac gtaccgtgac tttagcgtat
     2881 gaaggcgagc tcgtaaaaga acttgtcgga ccagaagacc gtaaaatcag ctacacgtat
     2941 aatgacaaac aagagctaat cagttcatcc actgcccgcg gtaaaatata ctgctatggc
     3001 tacacagatg gcttattaac atcgatttac gatccaaaac atacagaaga aaaaccatac
     3061 gaaacaacct ttgcttatga agaagagaaa ttaacagaaa taaccgatcc ggtcggcaaa
     3121 aaaacaacac tttcttatga catggaagag caacaaacaa ctttaacaaa cgagaaaaag
     3181 aagaaaacca tttattccta caatgatgct ggaaatccaa agaaagaaat tgtggatgca
     3241 gatggtctca aactcacaac gacctacacg tatgaatcaa ataacctagt aaaagaagtg
     3301 aatcctaagg gacaagaaga aacatattct tacgatgcag atggtaatat cacgcaagcg
     3361 acagatgctt acggtacaga atcatatacc tacaatggaa ataacgatgt aacgagcgca
     3421 actgacacag aaggacgcaa aacgacggtt acttatgacg gagcagatgc ggtgtcagaa
     3481 acacttgcga cagaatccca agtatcctct gtaacgcagt atgacgccta tggaaatcca
     3541 attcgaggta gtggtgaact ttcttcagca ggtaacttac ttcaaaacag cggctttgaa
     3601 aaaggagcag gagtttccaa ctggacactg attcaatctg atgcaaaagg aagcatgaca
     3661 ttcgatagca ctcagtcagc tccaggaaca ctcggcggca gcggttccgt taaactaacg
     3721 agtgaagcaa attctaccgt aaaaggctat tcatccgtta ctcaacgcgt tgatgtagaa
     3781 ccagaaacaa cgtatacatt tagcgcctgg attaaaacat ccggaatgac aaacgccgat
     3841 gcaattctca ttggacgttt acaagatgcg aatgcaaaag atattaccga tgctggcgta
     3901 tggcaatcca accgtgcgac atccatcaaa aagaacggcg gctgggtaaa acgtcaatta
     3961 acctttaaaa catctaaaaa cacgcgccaa gtcttgcttt atttggacaa cgaacaacca
     4021 gctccgcata aaggaaaagg aacaatttgg tacgacaatg ttcaatttga aaaaggtagt
     4081 gttgcttcca gttacaaccc ggtagtcaac agcagttttg aagagcacaa tggaacgctt
     4141 ccgactggct gggcacgttc aggaaatacc gcacttacac aagcaaaagt agtagataat
     4201 gaaggttaca gtggtgatag tgccgtttat tttgaacgaa aagcaacaag tgaagcctat
     4261 acacacattg cccaagatgt gccagtaaat caaaaagaag ccaaagcatt aacgatttcc
     4321 gcactatcca aatcagaaga tgccaaatca aacggctcag ttgcaacgat gtcgaacgat
     4381 tattctgtct ggggaacaat caactatcaa gatggcacaa cttcttccgt acaaggacaa
     4441 ttcccgctag gaaccaacga ctggaaccga agcgcagtag taattaaacc aaccaaacca
     4501 atcaaatcag ttaaagttta caccatgttc cgcaatggtt taacaggaaa agcatggttt
     4561 gacgacgtac gtgtcataga aggcgaagta ttaacaaaaa atgaatacga cgcttccggc
     4621 aactatgtaa cagccagcta tgacgaagaa ggccgcaaaa tcagcttcac ttacgatatt
     4681 tacggcaata aaacatccga aacagacgaa aaaggcaaca aaaaaacttt aacctatgat
     4741 gcagacaacg cgcttataga cacaaaacta gcgaacggca catccgtagc ctataagtac
     4801 gacgacaatg gcaacaccac cgaaaaaaat gtcactgcat ccggcaaaac gcaaaaaaat
     4861 atctatgaat atgacgtgga taacaaaatc accgcattta ccgatgcact aaatcgcaca
     4921 atcaagtatg aatacgatgc agccggtaat aaaacaaaag caatcatgcc aaatggtcgc
     4981 gtaaccgaaa gcacatacga ttccgctgac cgcatggacg ggattaaatg gaatgataaa
     5041 ctagccttta aattccaata cgatccaaac ggcaaccaaa caaaagtaac cgacgaaatc
     5101 aacagcatcg taaccgacaa aacctacgac gatgccaacc gaatcaccaa agtagccgaa
     5161 cgaggtggcg acgtaagcta cacatacaaa gacaaaccaa caaaagataa caaaggaaaa
     5221 acagacaaag tcggcgaagt agccattaac cacggcgact acacagcaaa aacaagctac
     5281 acatacaacg acttagaccg caatacccgc gtaaacgatg gaagcaaaaa cgcctatttc
     5341 gagtttgacg aatttggaaa catcaacgtc tacacagcag gaaacggcac cgcagccaac
     5401 tacacctacg atagcaccca aaaagtcacc aacgcagcta ttagtagcgc aagcggcacc
     5461 caaattttag acgaaaacta cacctatgac gcagcaagca atcgcacaag catcgacaac
     5521 aaacaagacg gaaaaacaac ctacgaatat gatgcagtca accaactaac taaagaaaca
     5581 ctaccagatg gcaccgtaaa agcatacacc tacgatggct tcggaaaccg cacacaagta
     5641 gcaatcagcg gaaacgagac aaaaacaatt gccgcaagtt ataatgatgg taatcaactg
     5701 gtttcgtgga acggagaggc tctgacgtat gacgcgaatg gtaaccgtac aagcgatggc
     5761 aagtacacgt atacatggga taccggcgac cgtttaagca gcatcacaaa aaaaggtgag
     5821 agcgagccgt ttacgagtta tacgtacgat gatgacgatc gtcgtctatc aaaaacggtc
     5881 gatggtgtga cgacgaatta tcattatgac ggcgatagta ttgatgttct gtatgaaact
     5941 gatggggatg gaaaagtagt tcgtcagtat gtttattcgg atgataatgt tcgtttagcg
     6001 atgaagatga atggtaaaac cctctattat cactataatg cgcatggcga cgtgattgca
     6061 ctcacggatg aagcaggtaa gattgtcgca gaatatgcgt atgatgcttg gggaaatgtg
     6121 ctgaaaaaca ctgcctctac agaagaagcc aaagcgaatc cttatggtta tgcaggatac
     6181 acgtatgaca aggaaatcga acaatattac ttgatggcgc gttattacga accagagcaa
     6241 ggtgtgttta ctgcttacga cccagaccca ggtgatgaag acgacccgca gacgatgaac
     6301 gggtataatt atgcgaataa taatccggtg atgatggttg acccggatgg gaactttcca
     6361 ttagccattc cagctgttta ttggggagtt agtggagcta ttgcagctgc gccatttgtt
     6421 ggttatggta taggtgcagc aggaacaaag atatggaata acactaaaaa agtgaatagg
     6481 ggatataagt tcctttggaa taatcgtaaa cagattgcta gaaaggtgta taagtcaact
     6541 agaattaagt ggggacatat taagaatagg cactctccta agtcatcgat taaaaaaaag
     6601 gggaaattca gaaataatag gactctaaaa agaacaacaa gagctacatt aagaagtggg
     6661 aaagctagac caggagagaa aggccggaca attttagaga aaacattcaa agaaagggta
     6721 ggcgtgaatc gtgacgggga cccgagctat agagtaagag ttatcagagc tccaaatggt
     6781 aaagtaatta catcatatcc catttaagca ggaggtaaac actatgttaa aaataaaaaa
     6841 acaagcacaa tctatttacg cttttaaaga aactggagga gaagtactta atttccaaat
     6901 agaaaaaaac tgtttgaaac ttttttctgg ggaagaaatt tcatgtgaaa taaacgatga
     6961 aataatttct gatcggtatt tcaaagttaa ggaagtcaaa ttgtctgatg agaaagtttg
     7021 tattttttgt catgatggtg tttacgatta tttattaatc tcatgtatag ggaagcattt
     7081 taaatatcca ttgggagaag gtgtggcgga tttcctcgtt ttaaatgatg aagcttatgt
     7141 tatttattca gaagaaggta tgtttgggag tgaggagaat ttacccatag cacaattagg
     7201 gcttattaaa atagatatat ttacaggaga aattactggg ctcttagatg acagcatttt
     7261 agaaacactc attgatgtac aatcaatgag ctgtaagaat aaaaggatac ggatactgtg
     7321 ttatgaagaa aatgatgatg actttacttt agactatgat ttaacctcga aaaaagttca
     7381 gaataaagtc gtaataaatt atactgtgga cgaattgttg agtgtgggag ataactttta
     7441 cgctagatat cagaatcata tttataaagt agatgaaagt atggaaatta cgaaagaaat
     7501 cattatagat aaaaaagtat atgatgaggc atatgcaata agtaccggat atagtgaagt
     7561 agttttagaa agtgaaaatg aattcaacat tgtccagctt tctaaacttt gaagaaggcc
     7621 tatagagaag aattagcatt aaaaataacc tgaaaatgag ccctccgttt ttatagggag
     7681 ggcttatttt aaaaatgaaa atcaaatcag gaacgttaaa tactataaaa taaataatca
     7741 ttgatggcgt gacgacgaat tatcattaca atgcggatga cgacgtaatc gcgctcacgg
     7801 aggaagcagg caaggttgtc gcagaatatg cgtatgatgc ttggggaaat gtgctgaaaa
     7861 atactgcctc cacggaagaa gccaaagcca attcgtatgg ttataaagga tatacgtatg
     7921 acaaggaaat taaacaatat tatttgatgg cgcggtatta cgaaccagaa caagtcgcat
     7981 ttacagctgt tgacccagac ccaggggatg aagacgatcc gcaaacgatg aatggatata
     8041 attatgcgag taataatcca gtgatgttag cagatccaga tgtactatgg gcaggagtat
     8101 tgtttaggtt tgccgcaaaa ggcggaaaaa cagcttggaa gtacgcgaaa aaaggcgcaa
     8161 aaaaaagttt caaagagcat gaaaaaatgg tggaagggat ttagattatc tgcagctaag
     8221 aagaaatctg taaaagaatc aacaaatgct gtaaattcta ttacagaaaa aaatcgaaat
     8281 atatattgag aaaaaaacat gattggaatt cgattacgga tggtagttgg gggcaggtga
     8341 gaaatcttat aaatcgaacg atgcggaatg gtaaggaatc agcctatgga agtgctaggc
     8401 agaaaacgat gaaatatggt aaaaggacta ttgtagtgac gtttaaacga gttgaaggga
     8461 aaattagaat tagtgatgca tgggttaaaa ctaaatagaa aactaacgag ggggaaaatg
     8521 aatcatgtta aatcttcaat gggaagattt agattgctta gaggtagagg gtgatttgga
     8581 aaaaatatta gactatagct ataatgcatg gaatttggac cagaggaata cccgttattt
     8641 tgtaagaacc tttttcataa aatggtattt gataattgat gattttgata ttgaagatta
     8701 tgaaacacag gaaaagcaat tgatgaatat gtatgaatat ggagaaaaaa agcttcttga
     8761 tgtgacagag gtaaagtgga ttattggtta ttgtatttca cttaatccag aatattttat
     8821 gaagcaagga gacaattatg aggaggtacg tataaaagga gataaatatc tccatgaatt
     8881 ggctttagct aatccagatg atatttattt aaaatcttta gattatgact ttggtactga
     8941 aggacattct catgaacgat atttagattg gaaaagagca aatagagaac aatttcttct
     9001 ttatgtagag gaaaatttta actatgattc gcttttttct gattgtttta aagaactaat
     9061 cactatggat ttagataaaa aagattaaaa aagatgtttt ggagagaagt ttaggcaaac
     9121 agaagaagaa acatgaaaca atttaagtca ttattaatga tgagtatttt tataagtgat
     9181 ttaattagca gtgagataag agtgaacatg aaaatttgtt cggtgaagta accattaacc
     9241 acggtaacca agcgatggca agtacacgta tatatgggat accggcgacc gtttaagcag
     9301 cattacgaaa aaaggcgaga gcaagccgtt tacgagttat acgtacgatg atgataaccg
     9361 ccacttgtcg aaaaccgtcg atggtgtgac gacgaattat cattatgatg gcgatagcat
     9421 taatgttcta tatgagacga ataatgatgg aaaagtcgtc cgtcaatatg tttattcgga
     9481 tgacggaatt cgattagcca tgaaaatgaa cggaaagtcg ctctattatc attacaatgc
     9541 ggatgacgac gtaattgcgc tcacggatga agcaggtaaa attgtcgcgg aatatacgta
     9601 tgatgcttgg ggaaatgtgc tgaaaaacaa tgcctctaca gaagaagcca aagccaattc
     9661 gtatggttat aaaggatata cgtatgacaa ggaaatcgaa caatattatt tgatggcgcg
     9721 ttattacgaa ccagaacaag gcgtatttac agctgttgac ccagacccag gcgatgaaga
     9781 cgatccgcaa acgatgaatg gatataatta tgcgagtaat aatccagtga tgttagcaga
     9841 tccagatgga ctatgggcag gagtattgtt taagtttgcc gcaaaaggcg gaaaaacagc
     9901 ttggaagtac gcgaaaaaag gcgcaaaaaa agtttcaaag agcatgaaaa aatggtggaa
     9961 ggggtttaaa gccaagccca agaaacgaca agaaacgaaa caaacaaata gccaattgaa
    10021 atcttttgac tcggataaaa gaaaacatat tacggaacca gaacatcaat ggaattcggt
    10081 ttcagacggg agttggggac aagtacaagc acttattaag agaactatgc gttcaggtaa
    10141 agaatctagt tataaaaaaa gtgctagaaa gaaaactttg atttataata agcggaaaat
    10201 tattgtaacc tttgttagaa aagatgggaa aattaaaatt ggtaatgcgt gggttgaaag
    10261 aaaataaaaa tgtatgatag aaaagaggta agagagctat gataaatcta gaatgggaag
    10321 aattagatcg gttagaagta gatgggaagc ttgaacaaat tttgaaattc agctatgatg
    10381 cttggatttc agatccgaag aatactcact tctttgtaag agcgtttttc ttaaagtggt
    10441 acttacaaat tgataacttt gatattgaga gttatgaaga acaagatgaa aaattaagat
    10501 atatgtatag ttatggggag caggaactac ttgatattcc agaagtaaag tggattatgg
    10561 gctattgcct ctcacttaat cctgaatgtt ttatgggaga agaggattac gatgatttac
    10621 ggttaaaagg aaagaagtat cttcgcgaag cttcattagc taatccagaa gatgtatttt
    10681 taaaagactc ttattatgct tctggaggaa agagtgtaaa agaatttgtg aaatgggaaa
    10741 gtgaaaacag agaacaactg gcaaattatc tgcaagcaaa ctttaattat gactcccttt
    10801 tctcagatta ttttaaggaa atggttacga tgtatataag tggaaaaata caggaaaaag
    10861 gcattttaga aaggcttttt tctaagctga aaaagaaaga taaaggtaat taagttttat
    10921 acaagaaaaa gtgtaatatc gttttttaag acagtaagtt aggtatagga taactgggaa
    10981 taggtataaa agaccttgat taggaaatat attccaatta aaaaatatgc attcactgaa
    11041 acattgatag atgttagtct tttagatgtg agagtagaac aagttttaat gaaaaataaa
    11101 cagaaaatga gccctccatt tttataggga gggcttattc taaaagtaag agatgtaaat
    11161 aatacatatc atgcgtttaa gcagcatcac gaaaaaaggc gagagtaagc ctatacgtac
    11221 gatgataatc gccgcttgtc gaaaacagtc gatggtgtga cgacgaatta tcattatgat
    11281 ggcgatagta ttgatgttct gtatgaaact gatggtgatg gaaaagtagt tcgtcagtat
    11341 gtttattcgg atgataatgt tcgtttagcg atgaagatga acggcaaaac cctttattat
    11401 cactataatg cgcatggcga cgtaattgca ctcacggatg aagcaggtaa aattgtcgca
    11461 gaatatgcgt atgatgcttg gggaaatgtg ctgaaaaaca atgcctctac ggaagaagcc
    11521 aaagccaatc cgtatggtta tgcgggatat acgtatgaca aggaaattga acaatattac
    11581 ttgatggcgc gttattacga acctaagcaa ggggtgttta ccgcttacga tccagaccca
    11641 ggcgatgaag acgacccgca gacgatgaat gggtataatt atgcgaataa taatccagtg
    11701 agatatgtgg atcctgatgg gcattgggtt tggctagcaa ttaatgctgg atttgcagct
    11761 tatgatggat ataaagcgta taagaaaaca aaaagttgga agagtgcagg atgggctgca
    11821 gcaaaaggtg cggttggagg aggtaagttt aaaggtggta agaaagccta tcgttttata
    11881 aagaaagcct atataaaaac taaaaaatgg aacagagaac gaaagtggtc aaagggaact
    11941 tttaattcca gtagagcaag cctaaattat cactataata aacatgtggt gaaaaaggga
    12001 agtaatataa ataagtcgca gtacaccaaa gaagctgtca aactcaaacg gaaaaataga
    12061 aaatcaagaa ctaaagctaa ttttaaagtt ggaaaaggat ataaaattaa gaatgggaaa
    12121 tattttggat attatacaag aggagggaag ataattactt atggaaagaa taggtaggga
    12181 taaatgcaaa aacaataatt ataatgactt gtttttaaga aa
//
LOCUS       DASDYO010000096        12058 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.096, whole genome shotgun sequence.
ACCESSION   DASDYO010000096 DASDYO010000000
VERSION     DASDYO010000096.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 12058)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 12058)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..12058
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.096"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..2564
                     /locus_tag="U0290_002166"
     CDS             <1..2564
                     /locus_tag="U0290_002166"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="alpha-mannosidase"
                     /protein_id="HEM2302204.1"
                     /translation="LIENLDYLLNVLETKDSFASYSFDGQMSVIERYLDIRPENKARV
                     EKLIQDRRLFVGPWYTQTDSLLVKTEAVIRNLLYGYKMGEEFGHSMSIGYSPDIFGQH
                     AYLPAIYKSFNMEHSIFQRGVYNDQVQDDLNFHWTSPDNKSIPTNNIFFGYGPGKFLS
                     SEKSYVETRLLPILDRLAEMNTHTDVLLLPAGGDQVLVRENFPEIVAELNEMDLGYTF
                     ILSDYEAFMNDAWTSTFPNEITGELLACQKSRIHHTCRSERYDIKRLNYLVENRLVNI
                     LEPLATMANKFGIKYPKPWLDIIWKKLFDSHAHNGIGASNSDDANHDIVVRLTSALRM
                     TDGLINLLKKQITKAVSQEMGDENIALLFNTNPVAEERTAKLTLFTPEKSFQLFSGDA
                     EVTFSVVHQEKLDGGRKVIVTAKGEKEVAVPDYYRTEIYLKSGLIPALGYKTLQVKAV
                     TTEMDQLISISKQTIENEKIIVQFENGKINLLNKEQQSIINDLIRFENVADAGDSFDF
                     SPLEGDQAIYIETSELLTVEKNHLYSKMMLKHTALVPKDLEARAQKTSTETFEILTEI
                     ELFDGEEFVRVRHTIDNKVKDHRIRALIKTNVAEPKYSYADQGYSLMKRSVTNPYLAN
                     WREDKFVEAPVPIFPVENIVAVSEEDATLALLVGGIKEYEILPKTAEIALTLFRSNGL
                     LGKDDLMWRPGRASGINNKVVPTPDGQMLEEMIFEYAVYVQPEKLNEQTLYAQSNIFE
                     GHTETYHLQNLNTFEERLERFEVDYPIDRLPAQNSIFELDNPNVFMSTCKKSWDGTGT
                     IIRLFNPSDKEETVRWTTNASSFEVSLAEEKIAELKENTICIPKKGFATILLEGE"
     gene            2566..4248
                     /locus_tag="U0290_002167"
     CDS             2566..4248
                     /locus_tag="U0290_002167"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466257.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphorylase"
                     /protein_id="HEM2302205.1"
                     /translation="MQTELVNQIEVKLRKIYQAAYQPAYLEKMLACAENYSNNARGSI
                     DTISEKNVYLIAYGDSIFEKNKHPLQTLNEFLQEYAQDVITDVHLLPIFPSTSDDGFS
                     VTDYKQIDEQLGDWDDVQKMSENFRVMLDFVANHMSKSSDWFKRFSDNEAPYNQFFIE
                     KNSQFDYKNVTRPRTSPLFHKYENGKELWTTFSEDQLDLNVRNIDCLVALTDVLLFYA
                     SKQATSIRLDAIGFLWKTSGTTCMHLPETHEIITLWRLLIDELYPNLQIITETNVPHE
                     ENISYFGDGENEANMVYQFPLPPLVLHTFTCHDTTKLSKWAKSISQVSSTATYFNFLA
                     SHDGIGMRPATGILSDEEINSLVQKAVQNGGQVSYKDNADGTQSVYELNINYGEALQN
                     LGEDTTEELVTKKIIAAHSILLTLQGIPAIYYHSLLGSKNDLVGYEESGINRRINREK
                     LEKNQLVHELETDTYRQTIFTSLKKLVPIRRNHTAFSPFATQEILDLGPDVFAIKRES
                     EEECIYGIINVTSHNIRKTLAFSGTNLLTNQPVTSELELTAYEVVWIKKAVQ"
     gene            4245..5378
                     /locus_tag="U0290_002168"
     CDS             4245..5378
                     /locus_tag="U0290_002168"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerate kinase"
                     /protein_id="HEM2302206.1"
                     /translation="MKIVIAPDSFKESATAVEVANAIKKGWTKARPADQISLAPVSDG
                     GEGFLTVLSESSEVELFQAEVTNLNGHKITASYGILASQETAIIESANTIGLDLIPAV
                     DRNPAYASSKGVGELILAALNHNVKKIIIGLGGSGTNDGGAGLIQALGVALLDKNKQP
                     IPPGGIHLQELAYIDASNLNPKLKNIQFQIACDVTNPLLGENGATFVFGAQKGATPEM
                     LVQLERAMQNYGAKLDQFSSQKITTKKGAGAAGGIAAGLMTFLNTDVLSGSALVMELS
                     NMKDKMKDADIVIVGEGRMDKQSMMGKIPVQIAQEAKKQGCFVLAIVGSLALENNIAQ
                     QHGIDAFFPNIPEITDLPTLFENTTKNLERTAENIAKLTLIGK"
     gene            complement(5383..6339)
                     /locus_tag="U0290_002169"
     CDS             complement(5383..6339)
                     /locus_tag="U0290_002169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2302207.1"
                     /translation="MPNIKEIAKLARVSVTTVSRVLNNHPYVVEEKRARVQAVIDELD
                     YSPNRSAMDLARGKTNTVGVIIPYNDHPWFDKIVNGILEVAFKNRYSVTLFPTGYDPK
                     EEEKYLMRLKTKQVDGLIITSRANNWDVILPYLAYGPIIACEYVESKEVSCSYIDRVK
                     AYRAGFQFLEDEGYKKVAFTAGRASRESTSTYGKINAYEQVFGSVGDNRFLSECYTLE
                     DGLKAGEHFFAEGKDWPDAIYANGDEVAAGVMYHVKKLGLRVPEDVAILGQENLPIGK
                     VLEITTLDHNLKKLGENAFTIFEQGKLQRIKVEHELIRRKTV"
     gene            complement(6407..7741)
                     /locus_tag="U0290_002170"
     CDS             complement(6407..7741)
                     /locus_tag="U0290_002170"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HlyC/CorC family transporter"
                     /protein_id="HEM2302208.1"
                     /translation="MNPDPESQQIILQLILIVVLTMLNAFFASAEMALVSLNKNRVKS
                     QAETGDKKAVMLAKLVDDPSKFLATIQVGITLAGFFSSASAATSIATRLESVFGGSSF
                     AKELSIIVVTIVLSYITLVFGELYPKRLALQKSEKIARVSVRPIMAVGVVLRPFVKFL
                     SFSTDILVKLTRMEKNTDNEKMTREEMQLLIETGRRDGVIEVEELQMLRGVFEMDNKY
                     AREVMVPRTDAFMIDAETESEELCDALLSENFSRVPVFTGDQDSVLGILHMKDFFAEA
                     RKSGFENIDVKALVKDAYFAQETMFIDDLLKNMQRTRNQMAILMDEYGGVAGIVTVED
                     LLEEIVGEIDDENDVFSDEVKKIDETTFIVEGRMPLDDFNEMFHVELPSRGVDTVAGF
                     VLTLTGTIPEEDDKVVVEYGTLRFTVEEMNDARLVSVRVEKDIQTSELEQMA"
     gene            complement(7859..8548)
                     /locus_tag="U0290_002171"
     CDS             complement(7859..8548)
                     /locus_tag="U0290_002171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466261.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD-dependent protein deacylase"
                     /protein_id="HEM2302209.1"
                     /translation="MNKLNEALKKAEHIVFLTGAGVSVPSGIPDYRSKNGLYAGMSSP
                     EYMLSHTCLVREPEKFYQFVTENMYYPDAEPNAIHTKMAEIEAEKDVTIITQNIDGLH
                     EKAGSKKVVNFHGSLYHCYCQKCGMSVTAEEYLKSDIHSGCGGVIRPDVVLYEEAIPE
                     SAIDQSLAAIRQADLIVIVGTSFRVSPFCNLTDYRNKKARIFAVNKEQISLPYPFEMM
                     ESDAVKVFAEI"
     gene            complement(8541..8831)
                     /locus_tag="U0290_002172"
     CDS             complement(8541..8831)
                     /locus_tag="U0290_002172"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466262.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mitomycin resistance protein mcrB"
                     /protein_id="HEM2302210.1"
                     /translation="MPTELIKLPGIGKKMVLMLNEIGVEEVADLKGKNPLELYEDTCD
                     KRGERMDPCVLYTYRCAVYVAETDEAEQDVDLRKWWNWKDKQHINERNLKNE"
     gene            complement(8821..10029)
                     /gene="lde"
                     /locus_tag="U0290_002173"
     CDS             complement(8821..10029)
                     /gene="lde"
                     /locus_tag="U0290_002173"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466263.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux MFS transporter Lde"
                     /protein_id="HEM2302211.1"
                     /translation="MENWKKNLYVVWVGCFLTGTGLNLIMPFLPLYIEELGVHNPDQV
                     SMWSGIALSSTFLVSAIMSPIWGKLADQKGRRIMLLRAALGMAIAMILMGLVSNVYQF
                     VGLRLLMGIFSGYISTANALIATQVPRHRSGWALGALSTAAVSGVLIGPLIGGALSDT
                     FGVRPVFYITGALLLGSFFLTLFFVKEKFTPVEKKEMRSGKEVFLSLKNPGLIISLFI
                     TTMMIQIASNSVNPILTLYVRDLAGNAQNIAFISGMIASVPGVAALIAAPRLGRWGDR
                     IGSERILLGALIGSMLLQIPMAFAQNPLQLGILRFLLGLTDGALLPAVQSLLTKNTPR
                     EVSGRIFGYNQSFQYIGNVIGPLVGSSVAAHFGYGDVFLVVAGFIFINVLISFYFNRK
                     MHGEKGNHAN"
     gene            complement(10146..10493)
                     /locus_tag="U0290_002174"
     CDS             complement(10146..10493)
                     /locus_tag="U0290_002174"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302212.1"
                     /translation="MNQTFIVKKEHVSQYPNPLFVNKNESIWVFEEDTEYPGWIFCKV
                     KSTGKEGWVPKQIIQLSNDGKSGTVSEDYSARELNVKPGDKLESNRELNGWVWCVTEE
                     NEAGWVPRGNLEA"
     gene            complement(10512..11156)
                     /gene="fsa"
                     /locus_tag="U0290_002175"
     CDS             complement(10512..11156)
                     /gene="fsa"
                     /locus_tag="U0290_002175"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466265.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HEM2302213.1"
                     /translation="MRFFIDTANVEEIKKANRMGFIAGVTTNPSLVAKEGRDFNEVIQ
                     EITSIVDGPISGEVVSLEADEMIAEGRVIAKIHPNMVVKIPMTGEGLAAVKVLTEEGI
                     KTNVTLVFSATQALLAARAGATYVSPFLGRLDDIGDDGLVLIRDIADIFEIHGIPTEI
                     ISASVRHPIHVIECAKAGADIATVPFKVFEQMLKHPLTDSGIDKFLADWEAAKK"
     gene            complement(11298..11987)
                     /locus_tag="U0290_002176"
     CDS             complement(11298..11987)
                     /locus_tag="U0290_002176"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2302214.1"
                     /translation="MLFLKELESNLTVSKLMELCFEHPSYKDYCSVISTKKGEVLESL
                     SPAGTKVYFVLSGIYGMIVEEDAEMEEESYKESIVRFLQKGDSFGLYHLFYDEWSPHV
                     SMQSLGHGEVMEVDSNFLFSIFDKKDENNFFMIKVMAEELREAHTFAKLSFLKKEERI
                     RKAILKCAQTLGTFSDNGILLPREITQEVLARYTNTSREYVAHTVMHLIKEDIIRNRP
                     KPLLVMDKTRL"
BASE COUNT         3727 a         2764 c         2067 g         3500 t
ORIGIN      
        1 tattaattga gaatttagac tatcttttaa atgttttaga aacaaaagat tcctttgcaa
       61 gttattcctt tgatggtcaa atgtctgtca ttgagcgtta cttagatatt cgtccagaaa
      121 ataaagcgcg cgttgaaaaa cttatccaag atcgtcgtct gttcgtcggt ccgtggtata
      181 cacaaaccga tagcttgtta gttaaaacag aagctgtgat tcgcaactta ctttatggtt
      241 ataaaatggg cgaagaattc ggccatagca tgagtatcgg ttattcccca gatatttttg
      301 ggcaacatgc ttatctgcca gctatttata aatcatttaa tatggagcat agcattttcc
      361 agcgtggtgt ttataacgat caagtgcaag atgaccttaa cttccactgg acatctccag
      421 acaacaagtc catcccaacc aacaatattt tcttcggtta tggacccggc aaatttttaa
      481 gcagtgaaaa aagctatgta gaaactcgtc ttctgccaat tttagatcga cttgctgaaa
      541 tgaacacaca tacagatgtc cttcttttac cagcaggcgg cgaccaagta cttgtgcgcg
      601 aaaacttccc agaaattgtc gcggaattga acgagatgga cttaggttat accttcattc
      661 tgtccgatta cgaagcattt atgaatgatg cttggacttc tactttcccg aacgaaatca
      721 ctggtgaact gcttgcttgc caaaaatcac gaatccacca tacatgtcgt tcagaacgct
      781 acgatattaa acgtcttaat tacttagtag aaaatagatt agtcaacatt ctagaaccac
      841 ttgcaacaat ggccaataaa ttcggaatca aatatcctaa accttggtta gatattattt
      901 ggaaaaaatt atttgatagc cacgctcata acggtattgg tgcttcaaat tcagatgacg
      961 caaaccatga catcgtagtt cggctaacta gcgcacttcg gatgacagat ggcttaatta
     1021 accttttgaa aaaacaaatt acgaaggccg ttagtcagga aatgggcgac gaaaatattg
     1081 cgctattatt caatactaac ccagtggcag aagaaagaac tgcaaaacta acattattca
     1141 ctcctgaaaa atcattccaa ctgttctcag gtgatgcgga agtgactttc agcgttgtac
     1201 atcaagaaaa attagacggt ggacggaaag taatcgtaac tgcaaaaggc gaaaaagaag
     1261 ttgctgttcc tgattattat cgtacagaaa tctacttgaa aagcggccta atccctgcac
     1321 ttggttacaa aacattgcaa gtgaaagccg ttactacaga aatggaccaa ttaatcagca
     1381 tttccaaaca aacaattgaa aatgaaaaaa tcattgttca attcgaaaac gggaaaatca
     1441 atcttttaaa taaagaacaa caaagcatta taaatgacct tattcgcttc gaaaatgtgg
     1501 ctgacgctgg ggattctttt gacttctcac cacttgaagg cgaccaagcc atctatatcg
     1561 aaacaagcga attactaacc gttgaaaaaa atcatctata tagcaaaatg atgttaaaac
     1621 atactgcttt agttccgaaa gatttagaag cccgcgcaca aaaaacaagt acagaaacat
     1681 ttgaaatttt aacagaaatc gaactttttg acggtgaaga attcgtccgt gttcgccata
     1741 ctattgacaa taaagtaaaa gaccaccgca ttagagcatt gattaaaaca aatgtagcag
     1801 aacctaaata ttcttacgca gaccaaggtt atagcctcat gaaacgcagc gtcacaaacc
     1861 cttaccttgc aaattggcgc gaggacaaat tcgtggaagc acctgtgccg attttcccag
     1921 tggaaaatat cgtcgctgtt tctgaagaag acgcaacact tgccttgtta gttggcggta
     1981 tcaaagaata tgaaatctta ccgaaaactg ctgaaatcgc attaactctt ttcagaagta
     2041 atggtttgct tggaaaagat gatctcatgt ggcgtccagg tcgtgcttcc ggtattaata
     2101 acaaagtcgt tcctacacca gacggtcaaa tgctcgaaga aatgattttt gaatatgctg
     2161 tgtacgtaca acctgagaaa ctaaatgaac aaacgctcta cgcgcaatct aacatttttg
     2221 aaggtcatac agaaacctat cacttacaaa acctaaatac atttgaagag cgcctagaac
     2281 gttttgaagt agattatcca atcgaccgtt taccagctca aaattctatc tttgaattag
     2341 ataacccgaa cgtattcatg agcacttgca aaaaatcgtg ggatggcact ggcacaatta
     2401 tccgcctatt taacccatca gacaaagaag aaaccgttcg ctggacaacc aacgcttcca
     2461 gttttgaagt ttcactagcg gaggaaaaaa tcgcagaact aaaagaaaac actatctgta
     2521 ttcctaaaaa aggatttgca actattttgt tggaaggaga ataatatgca aaccgaactg
     2581 gttaatcaaa tagaagtaaa actaagaaaa atttatcaag ctgcatacca acccgcatac
     2641 ttggaaaaaa tgctcgcatg cgccgaaaac tattctaata atgcgcgtgg ttcgattgat
     2701 actatttccg aaaaaaacgt ctatcttatt gcctatggcg acagcatttt cgaaaaaaac
     2761 aagcatccgt tacaaacatt gaatgaattc ctacaagaat atgcgcaaga tgttattaca
     2821 gatgtccact tgctgccgat tttccctagt acgtcagatg atggcttctc tgtcacagac
     2881 tacaagcaaa ttgacgaaca gcttggcgac tgggatgacg ttcaaaaaat gtctgagaac
     2941 ttccgagtga tgcttgattt cgtagccaat catatgtcga aatcaagtga ttggtttaag
     3001 cgattctccg ataacgaagc gccgtacaat caatttttca tcgagaaaaa cagccaattt
     3061 gattataaaa acgtcacacg tccgcggact tctccgctgt tccacaaata cgaaaacggt
     3121 aaagaacttt ggactacttt tagcgaagat cagttagact taaatgtccg taatatcgat
     3181 tgccttgtag ccttaacaga tgtactgctt ttctatgcat ccaaacaagc gacaagcatt
     3241 cgacttgatg ccattggatt tttatggaaa acttctggca ctacttgtat gcacctgcca
     3301 gaaacccatg agatcatcac gctttggcgt ctgctgattg atgaactata tccaaatctg
     3361 caaattatca cagaaacaaa cgtccctcat gaagaaaaca ttagttattt tggcgatggt
     3421 gaaaatgaag caaatatggt ttatcagttc ccgcttccgc cacttgtgct ccataccttc
     3481 acttgccatg atacaacgaa actttcgaag tgggcgaaat ccatttcaca agtttctagc
     3541 acagcgactt attttaactt cttagcaagt catgacggaa ttggtatgcg ccctgcgacc
     3601 ggaattcttt ccgacgaaga aatcaattct ctcgtccaaa aagcggtcca aaacggtggc
     3661 caagtttcct ataaagacaa cgcagatggc acgcagtcgg tatacgaact taatattaac
     3721 tacggtgaag ccctgcaaaa cctgggcgaa gacacaaccg aagaactcgt aacgaaaaaa
     3781 attatcgctg cccatagtat tttgctaaca cttcaaggca tcccagcgat ttactatcat
     3841 tcccttctag gttctaaaaa cgaccttgtt ggttacgaag aatccggtat taatcgccgc
     3901 atcaatcgtg aaaaactgga aaaaaatcaa ttggttcatg aacttgaaac agacacttat
     3961 cgacaaacca ttttcacatc actgaaaaaa ttggtgccaa tcagacgaaa ccacaccgct
     4021 ttttcaccat ttgcaaccca agaaatttta gatttaggac cagatgtttt tgcgattaaa
     4081 cgggaatctg aggaagaatg tatttacgga attatcaacg tcacttctca taatatccgc
     4141 aaaacgctcg ctttctctgg cacgaattta ttaaccaatc aacccgtaac gagtgaactt
     4201 gaattaactg catatgaggt tgtttggatt aagaaggcgg tccaatgaaa atcgtcatcg
     4261 cacctgattc attcaaagag agcgccactg ctgttgaagt agcaaatgct ataaaaaaag
     4321 gctggactaa agcacgtcca gccgatcaaa ttagccttgc ccctgtttct gacgggggtg
     4381 agggttttct tactgtttta agtgagtctt ccgaggtgga attatttcaa gcagaagtaa
     4441 ccaacctaaa tggtcacaaa ataacggcct cctacggtat tctcgctagc caagaaactg
     4501 cgattatcga gtccgccaac acgattggat tagatttaat cccagccgta gaccgtaatc
     4561 cagcttacgc gagctctaaa ggcgtcggtg aacttatttt ggcggcactg aatcacaacg
     4621 tcaaaaaaat cattatcggc cttggtggaa gtggcacaaa cgatggcggc gctgggctaa
     4681 tccaagcttt gggcgttgca ctacttgata aaaacaaaca gcctattccg cccggtggca
     4741 ttcatttgca agaactagcc tacattgatg ccagcaacct taatccaaag ctgaaaaaca
     4801 ttcaattcca aatagcctgc gacgtcacga atccacttct tggagaaaac ggcgctacct
     4861 tcgttttcgg tgctcaaaaa ggcgcaactc ccgaaatgct cgttcaacta gagcgcgcca
     4921 tgcagaacta cggagcaaaa ctcgatcaat tttcatctca aaaaatcact acaaaaaaag
     4981 gagccggagc cgctggtggt atcgctgccg gactaatgac tttcctaaat acagacgtgt
     5041 taagcggttc agctctagtt atggaacttt ctaatatgaa ggataaaatg aaagatgcgg
     5101 atatcgttat tgttggtgaa ggacgaatgg acaagcaatc gatgatgggg aaaatccctg
     5161 ttcaaattgc tcaagaagct aaaaaacaag gttgtttcgt cctagcaatc gtcggtagcc
     5221 ttgcactcga aaacaatatc gcccaacaac acggtatcga tgcgtttttc ccaaacatcc
     5281 cagaaataac agatttaccc actcttttcg aaaatacaac aaagaacctc gaacgcacgg
     5341 cggaaaacat tgccaaacta actttaattg gcaaataatt ttttaaactg ttttccttct
     5401 aatcaattca tgctccactt taattctttg caatttacct tgttcaaaaa tagtaaaagc
     5461 attttctccc aattttttta ggttatgatc aagcgttgtg atttctaaaa ccttaccaat
     5521 tgggagattt tcttgcccta aaatagcgac atcttccgga acacgcaagc cgagtttttt
     5581 cacgtgatac ataacccctg ccgcaacctc gtcaccattc gcataaatcg catcaggcca
     5641 gtctttcccc tctgcaaaaa aatgctcccc agccttcaaa ccatcttcaa gcgtataaca
     5701 ttcacttaga aaccgattat cacccactga accaaaaact tgctcataag cattgatttt
     5761 tccatatgta ctcgtacttt cacgcgatgc tctccccgct gtaaaagcca cttttttata
     5821 accttcatct tccaaaaact gaaatccagc ccggtatgct ttcacgcggt caatataaga
     5881 gcacgatacc tcttttgatt ccacatactc gcacgcaata atcggtccat acgctaggta
     5941 cggcaaaatc acgtcccaat tattggcacg cgaagtaata atcaggccat ccacctgttt
     6001 cgttttaaga cgcatcaagt acttttcttc ttctttcgga tcatatcctg ttggaaaaag
     6061 cgtcaccgaa taacggtttt taaaagctac ttccaaaata ccatttacaa ttttgtcaaa
     6121 ccacgggtga tcattataag gtataatcac gccaaccgta tttgttttcc cacgcgctaa
     6181 atccatggcg ctacggttag gtgaataatc taattcatca ataacagctt gcacacgggc
     6241 tcttttctcc tccacaacat acggatggtt attgagcaca cgtgacactg tcgtcactga
     6301 aactctcgct aatttggcta tttctttaat atttggcatt ttaaaaacct cattcctaag
     6361 aaaaaagtgc ggacagattt ctcataccgc actcctattt ttatcattaa gccatctgtt
     6421 caagttcgct tgtttggatg tctttttcga cacgaaccga aaccagtctg gcatcattca
     6481 tttcttctac tgtaaatcga agtgtaccgt attctactac tactttatca tcttcttctg
     6541 gaattgtccc agttaaagta agcacaaatc cagccacagt atctacgcca cgtgatggaa
     6601 gttccacgtg aaacatttca ttgaaatcat caagcggcat gcgaccttct acgataaatg
     6661 tcgtctcatc aattttcttc acttcatccg aaaacacatc attttcatcg tcaatctcgc
     6721 caacaatttc ttctaataaa tcttctacag tgacaatacc agcaacacca ccgtattcat
     6781 ccattaaaat agccatttga tttctagttc tttgcatatt tttaagtaga tcgtcaataa
     6841 acatcgtctc ttgcgcaaaa tacgcgtctt taacgagcgc cttcacatca atgttttcaa
     6901 aacctgactt tctcgcttcc gcaaaaaaat ctttcatatg cagaatacct agcaccgagt
     6961 cctgatcgcc tgtaaaaacg ggaacccttg aaaaattctc acttaataat gcgtcacaaa
     7021 gttcttccga ctctgtttcg gcatcaatca taaacgcatc tgttcgtggc accatcactt
     7081 cacgcgcata tttattatcc atttcaaata caccacgaag catttgtaat tcttctacct
     7141 caattacacc gtcacgtcga ccggtttcaa tcagtagctg catttcctct cgcgtcattt
     7201 tttcattatc cgtatttttc tccattctcg ttaatttcac aagaatatcg gttgaaaaag
     7261 acaggaattt cacgaacgga cgaagcacaa caccaactgc catgattggt cgtacagaaa
     7321 cacgggcaat tttttctgat ttttgaagtg ctaaacgttt tggataaagt tcaccgaaaa
     7381 ctaacgtgat atatgataac acaatagtta cgacgataat ggataactct ttcgcaaaac
     7441 tacttcctcc aaaaacagat tcaagtctag tcgcaatact agtggcagct gacgcactgg
     7501 agaaaaatcc cgcaagcgta ataccaactt gaatagtagc tagaaattta cttggatcat
     7561 ctacgagttt agctagcata accgcttttt tatcaccggt ttctgcctgg ctttttacac
     7621 gatttttgtt caatgataca agggccatct ctgctgaggc aaagaatgcg ttgagcatcg
     7681 tcaacaccac aataagaatt aactgcaaga taatctgctg actctcgggg tcagggttca
     7741 tatggaactc tccactcctt attttcatca agaaaacgac catgcatttt ctctaaatat
     7801 tccggacaat ttgccggtta agaaaatttt atcacgccac ccctattact gcaaggtttc
     7861 aaatctccgc gaaaactttc acagcgtcac tttccatcat ttcaaatgga taaggaagcg
     7921 aaatctgttc tttatttaca gcaaaaatcc gcgctttttt atttcgataa tccgttaaat
     7981 tacaaaacgg actcacgcga aaagatgtcc ctactatcac tatcaaatcc gcttgtctta
     8041 tagctgcaag agattgatct atcgcactct ctggaatcgc ttcttcataa agcaccacat
     8101 ccggacgaat gacgccacca caacccgaat ggatatccga tttcaagtac tcctcagcgg
     8161 taacagacat tccgcatttt tggcaataac aatgatataa actaccgtga aaatttacga
     8221 ctttttttga acctgctttt tcatgcaaac catcaatatt ttgcgtaata atcgtgacat
     8281 ctttttccgc ttcgatttca gccatttttg tatgaatcgc atttggctct gcatccggat
     8341 agtacatgtt ttctgtaaca aattgataaa acttctccgg ttcacgcaca agacacgtat
     8401 ggctcaacat atattccggg ctactcatcc cagcatataa gccgtttttc gagcgataat
     8461 ccggaattcc agaagggaca gaaacacccg ccccagttag aaaaacgatg tgttcagctt
     8521 ttttgagtgc ttcattcaac ttattcattc tttaaattcc tttcatttat atgttgttta
     8581 tctttccagt tccaccattt tcgcaaatca acatcttgct ccgcttcatc cgtttccgca
     8641 acatagactg cgcagcgata cgtataaagt acacacggat ccattctctc gcctcgctta
     8701 tcgcaagtat cctcatataa ttcaagcgga ttcttccctt ttaaatcagc aacctcttca
     8761 accccaattt catttaacat taacaccatt tttttaccta ttcctggtaa ttttattagt
     8821 tcagttggca tgatttccct tctctccgtg catttttcgg ttgaaataaa aactgattag
     8881 tacattgata aaaataaagc ctgcaactac gaggaagaca tctccgtaac caaaatgggc
     8941 ggcaacactt gacccaacaa gcggtccgat aacattccca atgtattgaa acgattgatt
     9001 ataaccaaaa atccgacctg aaacctcgcg cggtgtattt tttgtaagca atgattgaac
     9061 cgctggaagc aaggcgccgt ctgtaagccc taataagaaa cgtaaaatcc ctagttgtaa
     9121 tgggttttgt gcgaaagcca ttggaatttg gagtaacatt gaacctatga gcgcacctaa
     9181 caatattcgc tccgaaccaa ttcggtctcc ccatctccca agtctcggtg ccgcaataag
     9241 cgccgcaacc cctggaacag atgcaatcat cccactaata aaagcgatgt tttgcgcatt
     9301 tcctgccaaa tcacgcacgt ataatgtcaa aatcgggttc actgagttgg acgcaatttg
     9361 aatcatcatt gtcgtaataa ataaggaaat aatcaagccc gggtttttaa gcgataagaa
     9421 aacttctttc cctgaccgca tttccttttt ttctactggt gtaaatttct cttttacgaa
     9481 gaacagtgtg aggaaaaagc tacctaaaag aagtgctcct gtgatgtaaa acactggtct
     9541 gacgccaaat gtatccgaca acgctccgcc aattaacggg ccaattagca cacccgaaac
     9601 cgccgccgta gataatgccc caagagccca gccgctacga tgacgaggaa cttgtgtagc
     9661 aataagggca tttgctgttg aaatatatcc tgaaaaaatc cccattaata agcgcaaacc
     9721 aacaaattgg tatacattgc ttacgagtcc catcagaatc atcgctatcg ccatacctag
     9781 cgcagctcgc aaaagcataa ttctccgccc tttttggtca gctagtttac cccaaattgg
     9841 tgacataata gctgatacta aaaaggtcga actgagtgca atccctgacc acatgcttac
     9901 ttgatccgga ttatgcactc ctaattcttc aatatacaat ggtaaaaatg gcatgattaa
     9961 atttaatccg gttccggtta gaaagcaccc cacccagaca acatacaaat tcttcttcca
    10021 attttccata aacccaccta gattcttcta tcgttatcct taattattcc acaaaaaaag
    10081 cgaaagtaaa actaaaccct tcgctttttt gctatatttg cgtaaaatgt ttcacgtgga
    10141 acattttatg cttctaaatt tcctcgtggt acccaaccag cttcattctc ttctgttacg
    10201 caccaaaccc aaccattaag ttcacgatta ctttctaatt tatcgcctgg tttaacattt
    10261 aattcgcgcg cagagtagtc ttctgatacg gttccactct ttccatcatt actcaattga
    10321 ataatttgtt taggaaccca gccttctttt ccggttgact tcactttaca aaaaatccag
    10381 cctggatatt ctgtatcttc ttcaaacacc caaatagact catttttatt cacaaaaagg
    10441 ggatttggat attgactaac atgttctttt ttcacgataa atgtttgatt catagttaga
    10501 aacctacctc tttatttttt cgccgcttcc caatctgcaa gaaatttgtc aatcccactg
    10561 tcggtcaacg gatgttttag catttgttcg aacactttaa atggcaccgt agcaatgtca
    10621 gctccggctt tggcacattc aataacgtgg attgggtgtc gcacacttgc tgaaataatt
    10681 tctgttggaa tcccgtgaat ctcgaaaata tccgcaatgt cacgaattag aactaagcca
    10741 tcgtcgccta tatcatctaa tcgacctaaa aacggtgata cgtatgttgc gccagctcgt
    10801 gctgcaagca aggcctgtgt ggcagaaaac acaagtgtta cattggtttt aatgccttct
    10861 tctgtcaaca cttttacagc tgccaaacct tcgcctgtca tcggtatctt tacaaccata
    10921 ttcggatgga tttttgcaat aactcgacct tccgcaatca tctcatctgc ttctaaactt
    10981 actacttcgc cactaatcgg tccgtcaaca atggatgtga tttcttgaat gacctcatta
    11041 aaatcgcgac cttcttttgc aacaagtgat ggatttgtcg tgactccggc aatgaatccc
    11101 attctgttag cctttttaat ctcttctacg ttcgctgtat cgataaaaaa tctcattaaa
    11161 acatcctcct tttctatcaa gcgctttcaa ttacagagcc attataacgc aaaaatttaa
    11221 ataatgcttt tgaagtgctt ttccacaaaa aaaaagaatg ccactgagca ttccaaaaag
    11281 tttcacgtga aacaaaatta taatcgagtt ttgtccatca ctaggagagg ctttggtcta
    11341 tttctaatta tatcctcttt aattaaatgc atgactgtat gagccacgta ttctcgtgat
    11401 gtatttgtgt atcttgcaag tacttcttgc gtgatttctc ttggtaacaa tatcccgtta
    11461 tcagaaaacg ttcctaaagt ttgagcgcat ttgagaatgg ctttgcggat tcgttcttcc
    11521 tttttcaaga agcttagttt tgcaaatgta tgggcttcac gtaattcttc tgccatcact
    11581 ttaatcataa aaaagttgtt ctcatctttt ttgtcgaaaa tagagaacaa gaaattgcta
    11641 tctacttcca taacttctcc gtgacctaag ctctgcatcg aaacatgcgg actccattca
    11701 tcgtaaaaaa gatgatatag tccaaaacta tctccttttt gcaagaaacg aacaatgctt
    11761 tctttatagc tttcttcttc catttctgca tcttcctcta caatcatccc gtatatgccg
    11821 cttagaacaa aatatacttt tgttccagcc ggacttaaac tttctagaac ctcacctttc
    11881 ttggtgctga taaccgagca gtagtctttg taacttggat gttcaaagca caactccatt
    11941 aatttgctaa ccgttagatt ggattcaagc tcttttaaga atagcatatt ctctcctttg
    12001 ctatattata ttgaagaaac tcttcgtaat tatatcataa aggctgtatt caaaatcc
//
LOCUS       DASDYO010000097        11940 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.097, whole genome shotgun sequence.
ACCESSION   DASDYO010000097 DASDYO010000000
VERSION     DASDYO010000097.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11940)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11940)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11940
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.097"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            59..1024
                     /locus_tag="U0290_002177"
     CDS             59..1024
                     /locus_tag="U0290_002177"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2302215.1"
                     /translation="MATLADVAKRANVSKMTVSRVINHPDQVSDELKMLVYSAMEALE
                     YVPNYAARALVQNRTQVIKFLILEEIDTVEPYYMNLLTGISRELDKYYYSLQLVTQRS
                     RNIGAYDGLIVTGIRDKDYDLGLLDIDKPVIFYGENKRGYDSIDVDNKKGTALATEHM
                     VEIGFSRIVFLGIDLLDEQFMKSRLEGYEEIVKEHGLEPESYFIANSSSVAEEKAFEL
                     LRYNSEKIAIVCASDRIAIGVVRAAAAFGRRFGENIAVTGFDGVFLDRISSPKITTVQ
                     SPVVEMGEELAKMLLAKINDHGKPQGNLLFTPELLIRASTTGKEE"
     gene            complement(1060..1695)
                     /locus_tag="U0290_002178"
     CDS             complement(1060..1695)
                     /locus_tag="U0290_002178"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465651.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CPBP family intramembrane metalloprotease"
                     /protein_id="HEM2302216.1"
                     /translation="MENTLSFKKQGYWLFSSAIIIGVLFLLLPHIISNIGVLEFIGAF
                     FNALCMGVIAFIILKAEFLDWFKHFSFKWILIGAPALIIISSIFNIAWAYFAGSTTEN
                     GINSVLTWSYVFTSIPFMLLGEELLSISLLYAAWKKWNWKFWQASLLCSLLFATWHLT
                     SYDFNFLQCIITLAPARLILNYLFKKTNSIWVTFIVHFIFDFIAFLPILLK"
     gene            1953..3728
                     /locus_tag="U0290_002179"
     CDS             1953..3728
                     /locus_tag="U0290_002179"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465650.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha-glycosidase"
                     /protein_id="HEM2302217.1"
                     /translation="MEKAGIYHQPASSYAYSYDAKTLHIRIRTKRLDISEVTLIAADP
                     YLWKDGKWQSESYTMRKIAETEEHDYWFFAITPEHRRLQYGFLLTDTEGETTFYGGRG
                     FFEPTEANLATMDYYFKFPFIHAVDTFEAPEWVGNTIWYQIFPERFANGNPAISPENA
                     LPWGSKDPNTTDFFGGDIEGIIEHLDYLAELGINGVYLTPVFEAPTNHKYDTVDYKKI
                     DPHFGDKETFRKLVQEAHKRGIRIMLDAVFNHIGDTSAEWQDVVLNEEKSAYRDWFHI
                     HSFPVRQNENGNIEGEPTLSYDTFAFTTHMPKLNTANPEVQKYLLDIATYWIREFDID
                     GWRLDVANEVDHAFWKEFKKAVQAEKEDIYILGEIWHDSWIWLLGDEFHAVMNYPFTQ
                     TIIENFIEEKITPEQMVSGINEQYMRYPNQVNEVMFNMLDSHDTARILTRANNDEDKV
                     KQALAFMFAHTGSPCIYYGTEIGMDGGNDPGCRKCMEWDETKQNQDMLAFTKQLIALR
                     KDNQAIITSGELTWLGASSETGITAFSKELNGEKLHFLFNQAKEDKDFTISFENTATD
                     IWNNRAVTENLVVPAKGFLVVKENS"
     gene            3941..5200
                     /locus_tag="U0290_002180"
     CDS             3941..5200
                     /locus_tag="U0290_002180"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="extracellular solute-binding protein"
                     /protein_id="HEM2302218.1"
                     /translation="MKRFKKVGIVSAVLVMALSLAACGGGKDTSKSGSSDEKTLTVSV
                     DAGYKDYVNKIKGDFEKDNDVKVKVVEKDMFETLEALPLDGPAGTAPDVMMSAFDRIG
                     SLGQQGHLAEVKLGNKDDYDEKDQKQVTIDDKIYGAPAIIETLVLYYNKDLLDKAPAT
                     FKDLETLSKDSRFAFTSEKGKNTGFLAKWTDFYFSYGLLAGYGGYVFGDEGTNPKDIG
                     LNNKGSVEGITYATKWFQDVWPKGMQDNKSADDFIQDQFVKGKAAAILGGPWSAANYK
                     EAKINYGVAKIPTLNNGKEYSPFAGGKGWVVSNYSKNKDVAQKWLDYVTNQKNQETLY
                     DMTNEVPANLKARDTAKSKNDELTNAVIEQYKNAQPMPNIPEMSEVWTGAENLMFDAA
                     SGSKTPQQSADDAVKVIEDNVTQKYTK"
     gene            5288..6595
                     /locus_tag="U0290_002181"
     CDS             5288..6595
                     /locus_tag="U0290_002181"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2302219.1"
                     /translation="MKLEQKQIKNVRQATLLSIIPGLGQFYNKQNFKGIVFFALFALF
                     IIEFFAVGLNALIGLVTLGSVPGVDHSLFLMIEGTLQLIVTLLFIGFWFINIFDARRV
                     AMQWNLGETVNRSAIAIIKNMLDKGFPYLLTLPAYLVMTFVIIFPVLVTLFMAFTNYD
                     FYHIPPANLIDWVGFKNFFNIFFLSSYRDTFLSVFSWTLIWTICATSLQIVVGVFTAI
                     VANQSFIKGKRLFGVVFLLPWAVPAFITIMSFSNMFNDSIGAINSQVIPLLNHLPFVD
                     INAIAWKTDPFWTKVALISIQGWLGFPYIYVMVTGVLQAIPGELYEAARIDGASAIQR
                     FRKITLPMILFVTAPVFITQYTFNFNNFSIIYLFNEGGPGSVGAGAGSTDILISWIYK
                     LTTGTSPQYAVAAAVTLLISIIVITVSMIAFKKTNAFGNEEMM"
     gene            6596..7447
                     /locus_tag="U0290_002182"
     CDS             6596..7447
                     /locus_tag="U0290_002182"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2302220.1"
                     /translation="MRDFMKDQRTTKFLTQFFTYLFLTVLTIIILYPILITASSAFKP
                     GNIAAFTLEWSDSWTLNNFTRLFNETLYLDWYKNTLIIAVVTMIMQVTIVTLAGYTYS
                     RYRFKGRKNSLIFFLIIQMVPTMAALTAFYVLAMLLGALDQYWFLTLIYIGGGIPMNT
                     WLMKGYFDTVPRDLDESAKLDGAGHFRIFAQIILPLVRPMIAVQALWAFMGPFGDFLL
                     AKFLLRTPENLTIAVGLQTFIANPQQQKVALFAAGAILAALPICLLFFFLQKNFVSGL
                     TAGGTKG"
     gene            7475..8308
                     /locus_tag="U0290_002183"
     CDS             7475..8308
                     /locus_tag="U0290_002183"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1189 domain-containing protein"
                     /protein_id="HEM2302221.1"
                     /translation="MKKVPFIIQYVKSTLGPTAIFEGRKVLKFWQMVIVFIFLNALLL
                     LPVSAHFANQSSFDLPSLMPKMAALGTDQLATEVSALTLENGALTDKNAHIVEKTANG
                     VAGVNLTKAELSGAKNVINFKDQEMTLTDSSGYTFEVSYPKDATLSEITSGESLVDWV
                     SAQWYLENQAFVFLSMVLMIGSIIFVSSLMLTVFTTLFIWMTKRSSFSSIASFKESVN
                     LTLNALGIPVIAACIIGFIYFDITIIMAVQSLGMVLMIAWTFLKTRFYKTSEKSMAAS
                     R"
     gene            8324..10585
                     /locus_tag="U0290_002184"
     CDS             8324..10585
                     /locus_tag="U0290_002184"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929100.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 65 protein"
                     /protein_id="HEM2302222.1"
                     /translation="MAQKQLFEIEPWTLRTTKLDKENKRLQESLTSLGNGYMGMRGNF
                     EEGYSGDGHIGTYYAGVWFPDKTRVGWWKNGYPDYFGKVINGLNFIGIEVRLDGEKLD
                     LFVDEVSDFELVLDMEKGVLRRQFTVVKNNKTFRISAERFLSVATKELAVIRYQVEAK
                     SAAKVDLTSFLDGNVQNEDANYEEMFWQEVEKASSASRGSLVTKTIPNNFGTPRFTVS
                     AVMENTTNTANQTNQTKALYAENHFQFDLKENEVAQIEKRVVITTSRDYEEREILPAG
                     EKILQSLEAKTYDELLAAHVAGWRERWDKADVEIAGDDSAQQGIRFNIFQLFATYYGE
                     DARLNIGPKGFTGEKYGGATYWDTEAFALPMYLSLTDKSVSHNLLKYRHDQLDGAKIN
                     AQKIGLAGALYPMVTFTGVECHNEWEITFEEIHRNGAIAYAIYNYTNYTGDDSYLKTD
                     GIEVLTEITRFWADRVHLSDRLDKYMIHGVTGPNEYDNNVSNNWYTNYIAAWTIRYTL
                     ENLDAEAKKRLGVTEYEIAKWEDIEHRMYYPFDEKWQIFVQHDTFLDKELRSTDTLKP
                     EDMPINQNWSWDKILRSCFIKQADVLQGLYLFYDDFDFDTKQRNFEFYEPLTVHESSL
                     SPAVHAVLASELGKYDKAVELYKRTARLDLDNINNDTEDGLHITSMAGSWLSIVQGFA
                     GMRVTDGELSFAPFLPDGWENYRFKINFRDRLLEVKVERNSVEITLLAGKAFEINLYG
                     EPQELHSTVNVTK"
     gene            10714..>11940
                     /locus_tag="U0290_002185"
     CDS             10714..>11940
                     /locus_tag="U0290_002185"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681399.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid biosynthesis protein"
                     /protein_id="HEM2302223.1"
                     /translation="MANLKVIENEATILASIPKHNVDYNARVMQSVSVDYERDMIYWT
                     QQYSGKKMTDAGAGESYNITRTDLKGNYIDQMWCLNGGHGTNIALDYNLESKKMHIWS
                     AYKINNKWEVVCYPYESNKILKGTESSIFISKVESGSYNRISGDLKNDMLVFHSGGDP
                     KTFNIRIVRASSVREGKLEVLYKVKATEANDAYVYQGCALDFPYLYTASGTGGVEEPK
                     QLTCVDIVTGKRVYQTTFKFNTKAMQTTESNFAEPENVCVYYKNNQKHIVVGYALGGA
                     GNRMNRAFDLVENNSENIETEIESLRNLIISRKRTEVIFDQSTKGDMTTNFKLRETLN
                     NFDIIQVVLESGGGYTTASRLVSPKLFEASKSFIFASSNIGDTSGNNVDMYEYAANFN
                     DDLTSFKNDRAVKIEVS"
BASE COUNT         3953 a         1969 c         2510 g         3508 t
ORIGIN      
        1 tttttttttg tgtaaaagat ggtacaataa ggaagattat gaatggagga ggttggagat
       61 ggcgacttta gcagatgttg cgaaacgggc aaatgtctcc aaaatgacag tttcacgggt
      121 tattaatcat ccagatcaag tctcagatga actgaaaatg cttgtttata gtgcaatgga
      181 agccttagag tatgtaccaa attatgctgc aagggcgctt gttcaaaata ggacgcaagt
      241 tattaaattt ttgattttag aagaaattga tacagttgaa ccatattata tgaatttatt
      301 aacaggaatt agtcgggagt tagataaata ctactattcg cttcaactcg ttacgcaaag
      361 atccaggaat atcggagctt atgacgggct tattgtcacg ggaatacgcg acaaagatta
      421 tgatttagga cttttagata ttgataaacc agttattttt tatggtgaaa ataaacgtgg
      481 ctatgattct attgatgtag ataataaaaa agggactgcg ctcgcaacag agcatatggt
      541 agagatcggt ttttcgcgaa tcgtcttttt gggaattgat ttattagatg aacagtttat
      601 gaaatcgcgc ctagaaggct atgaagaaat agtgaaagaa catggtttgg aaccggaaag
      661 ttattttatt gcgaatagtt ccagtgtcgc ggaagaaaaa gcatttgaat tactacgcta
      721 taactcagaa aaaattgcga ttgtttgcgc atcagatcga attgccattg gggttgttcg
      781 tgctgccgct gcttttggtc gccgttttgg tgaaaatatt gctgtaacag ggtttgatgg
      841 tgttttttta gatagaattt catcgccaaa aattacaact gttcaatctc ccgtcgttga
      901 aatgggggaa gaactcgcga agatgttact tgcgaaaatt aatgatcacg gaaaacctca
      961 aggaaaccta ttatttactc ctgaattact gataagagcc tctacaactg gaaaagaaga
     1021 gtaataaaaa cgctaggaat ctttattcct agcgtttttt tatttgagta aaatgggtaa
     1081 aaatgcgatg aaatcaaaaa tgaagtgaac gatgaaagta acccaaatcg agtttgtttt
     1141 cttaaataag tagttcaaaa tgagtctagc aggtgctaaa gtaatgatac attgtaagaa
     1201 gttaaaatca taggaagtca gatgccacgt cgcaaatagt aacgagcaga gcaaggaagc
     1261 ttgccagaat ttccagttcc attttttcca agcggcatag agtaagctaa tggatagtag
     1321 ttcttcgcca agaagcatga acgggatgct tgtgaaaacg taagaccatg taagtacact
     1381 gttgatacca ttttcagtag tactgcccgc gaagtaagcc caagcaatgt tgaaaataga
     1441 gctgataata attaatgctg gagcaccgat gaggatccat ttgaaactaa aatgtttaaa
     1501 ccaatcgagg aattctgctt ttagtatgat aaaagcaata acccccatgc atagggcgtt
     1561 aaaaaaagca cctataaatt ctaacactcc aatattggaa atgatgtgtg gcaaaagaag
     1621 aaaaagaaca ccaataatga ttgcgctgga aaataaccaa tacccttgtt ttttaaagct
     1681 taaagtattt tccattttat cctcctttta gacctttttt cgatagattt cattagtcca
     1741 tgagttatta tagctcttta ctttaaatca gtaaagttac taatttgtca ctttaaagga
     1801 ggagggagaa ttggctttct tctatattat gttgaaagaa tatgaaatag ttagaaaatc
     1861 ttgttaccgt taacgagcga gaaaaggttg caaacgcttt aatggaaatg ctaatttgaa
     1921 atagaacgat aggtgatata ggaggagaaa aaatggaaaa agcagggatt tatcatcaac
     1981 cagcgagtag ctatgcttat agttatgacg ctaaaacact acatattcgg attagaacga
     2041 aacgcttgga tattagcgag gttactctaa ttgctgccga cccttactta tggaaagatg
     2101 gaaaatggca aagtgaatct tatacaatgc gcaaaatcgc agaaacagaa gagcacgatt
     2161 attggttttt tgcaattaca ccagaacata gacgtcttca atatggcttt ttactaacag
     2221 atacagaagg agaaacaaca ttttacggcg gacgtggttt ctttgagcca actgaggcta
     2281 atttagctac gatggattat tactttaaat ttccatttat ccatgcggtg gatacttttg
     2341 aggcgcctga atgggttggg aatactattt ggtaccagat tttcccagaa cgttttgcaa
     2401 atgggaatcc ggctatttct ccggaaaatg ccttgccgtg gggaagtaaa gatccgaaca
     2461 caacagactt tttcggcggg gatatagaag gaattatcga gcatttagat tatttagcag
     2521 agcttggtat taatggggtt tatttgacac ctgtgtttga agcaccaacc aatcataaat
     2581 acgatacggt tgattataaa aaaattgatc cacattttgg agataaagaa acgtttagaa
     2641 aattagttca ggaagcgcat aaacgtggga ttcgcattat gttagatgcg gtgttcaatc
     2701 acattggcga tacttcagca gagtggcaag atgttgtctt aaatgaagaa aaatctgcat
     2761 atcgtgattg gttccacatc catagtttcc ctgttcgtca aaatgaaaat ggcaatattg
     2821 aaggagaacc aacactttct tacgatacat ttgctttcac gacgcatatg ccaaaattaa
     2881 atacggctaa cccagaagtt cagaagtatc tactggatat tgcaacttac tggattcgcg
     2941 aatttgacat tgatggttgg cgcttagatg ttgctaatga agtagatcat gctttctgga
     3001 aagaatttaa aaaggctgtc caagcggaaa aagaagatat ttatattctt ggtgaaattt
     3061 ggcatgattc gtggatttgg ttacttggag atgaattcca cgccgtaatg aactatccat
     3121 ttacacaaac gattattgag aactttattg aagaaaaaat cacaccggag caaatggttt
     3181 ctggtattaa tgaacaatat atgcgctacc caaatcaagt gaatgaagta atgtttaata
     3241 tgcttgatag ccatgatacg gcgcgtattt taactcgtgc taataatgat gaggataaag
     3301 tgaaacaagc gcttgccttc atgttcgcgc acactggttc gccgtgtatt tattacggaa
     3361 ctgaaatcgg catggacgga ggaaatgacc caggttgccg taagtgtatg gaatgggatg
     3421 aaacgaagca aaaccaagat atgctagcgt ttacgaaaca attaattgcc ctaagaaaag
     3481 ataaccaagc aattatcaca tccggcgaat taacttggct aggtgcaagt agcgaaacgg
     3541 gcattacagc attttctaaa gaattaaatg gtgaaaaact gcatttcctt ttcaatcaag
     3601 caaaagaaga taaagatttc acaatttcat ttgaaaatac agcgacagat atttggaaca
     3661 accgagctgt aacagaaaat cttgttgtcc cagcaaaagg atttcttgtt gttaaagaaa
     3721 acagctaaat caatggcgta aaggaatttt tcacatgttt accgaaaaaa tgttgttatc
     3781 ggtaacatgt gaaatctcct tgtaaacgct ttcgaaatca gcatataata aatgcatagg
     3841 ttaacctaat tcacaaactt taaaaagaat tgaaaaaaga tggggactta gaaatcagac
     3901 agtaaagggc gacttttttc ataaagagga ggaaaagtaa atgaagcgtt tcaaaaaagt
     3961 gggaatagtt tcggcggttt tagtaatggc tttaagctta gcagcatgtg gtggtggaaa
     4021 agacactagt aaatctggct catctgatga aaaaacatta acggtttccg ttgacgcagg
     4081 ctacaaagac tacgtgaaca aaataaaagg tgattttgaa aaagataatg acgtgaaagt
     4141 aaaagtagtc gaaaaagaca tgttcgaaac attagaagca ttgccacttg atggcccggc
     4201 tggaactgct ccagacgtaa tgatgtccgc atttgataga attggaagct taggccaaca
     4261 aggacattta gcggaagtaa aacttggaaa taaagacgat tacgatgaaa aagaccaaaa
     4321 acaagtaacc attgacgata aaatttatgg cgctccagca attattgaaa ctctagtact
     4381 ttactataat aaagatttac tcgacaaagc tccagcaact ttcaaagatt tagaaacact
     4441 ttctaaagat tctcgttttg ccttcacttc tgaaaaagga aaaaatactg gtttcttagc
     4501 aaaatggact gatttctact tctcttacgg actacttgca ggatacggcg gttatgtatt
     4561 cggcgatgaa ggtacgaatc caaaagacat cggtttaaac aataaaggtt cggttgaagg
     4621 aattacttat gcaacaaaat ggttccaaga tgtatggcca aaaggtatgc aagacaataa
     4681 gagtgcagat gactttatcc aagatcaatt tgttaaaggt aaagcagcag caattctagg
     4741 cggtccatgg tcagcagcaa actacaaaga agcaaaaatt aattacggcg tagcaaaaat
     4801 cccgacacta aacaatggca aagaatactc tccatttgca ggcggtaaag gttgggttgt
     4861 aagtaactat tctaaaaaca aagatgtagc tcaaaaatgg ttggattatg taactaacca
     4921 aaaaaatcaa gaaactttat atgatatgac aaatgaagta ccagctaact taaaagcacg
     4981 cgatacagcg aaatcaaaaa atgatgaatt aactaatgct gttatcgaac aatacaaaaa
     5041 tgcgcaacca atgccaaata ttccagaaat gtcggaagtt tggacaggtg ctgaaaactt
     5101 aatgtttgat gcagcttctg gttcgaaaac accgcaacaa tcagcagatg atgcagtaaa
     5161 agtaattgaa gataacgtaa cgcaaaaata tactaaataa taatgatttg gcggggcaaa
     5221 gatagcgcgc tccgccattt ttttcaactt agctagtgaa tctatatcta gaattgaggg
     5281 taacaaaatg aaactagaac aaaaacaaat taaaaatgtt cgtcaagcga ctttgttatc
     5341 aatcattccg ggacttggtc aattttataa taagcaaaat tttaaaggga ttgtcttttt
     5401 cgcactattt gctttgttta tcatagaatt ttttgcagtt gggctgaatg cactgattgg
     5461 ccttgtaaca cttggatctg taccgggtgt agaccattcc ttatttttaa tgattgaagg
     5521 tactttacaa ttaattgtga cattactatt tataggcttt tggtttataa atattttcga
     5581 tgcaagacgc gtggctatgc agtggaacct aggtgaaact gttaaccgtt ctgcgattgc
     5641 tattataaaa aatatgctcg acaaaggttt cccgtactta cttacattac ctgcatactt
     5701 agtgatgact tttgttatta ttttcccagt tcttgttact cttttcatgg catttaccaa
     5761 ctatgatttt taccatattc cgccagcgaa cttaattgac tgggttggat ttaagaactt
     5821 ctttaatatt ttcttcctaa gttcgtatcg tgacacgttc ctaagcgtat tttcgtggac
     5881 actcatttgg acaatctgtg ccacttcttt acaaattgtc gttggtgtat tcacggcgat
     5941 tgttgcgaac caaagcttta ttaaagggaa acgtcttttt ggggtagttt tcttacttcc
     6001 ttgggcggta ccagcattta ttacaattat gagtttttcc aatatgttta acgacagtat
     6061 tggcgcaatc aactcgcaag tcattccgct tctaaaccat ttgccatttg ttgatatcaa
     6121 tgcgattgct tggaaaacag atcctttctg gacaaaagtg gcgctgatta gtattcaagg
     6181 ttggcttggt tttccgtata tttacgttat ggttactggg gtgcttcaag caattcctgg
     6241 tgaactatac gaagcagcta gaattgatgg tgcaagtgcg attcaacgtt tccgtaaaat
     6301 tacattaccg atgattttat ttgtaaccgc gccggtattt attacgcaat atacatttaa
     6361 cttcaacaac ttttcgataa tatacttatt caatgaaggt ggtcccggaa gtgtcggagc
     6421 aggcgcagga tcaaccgata tcttaatttc atggatttat aaattaacaa caggtacttc
     6481 gccacaatac gctgtagctg ctgctgtgac gcttcttatc tctattatcg ttattactgt
     6541 ttcgatgatt gcctttaaga agacgaatgc ctttgggaac gaggagatga tgtaaatgag
     6601 agactttatg aaagatcagc ggacaacaaa gttcttaaca cagtttttca cgtatttgtt
     6661 tttaaccgtg ctaacgatta ttattttgta tccgattcta ataacagcat cttctgcctt
     6721 caaaccaggg aatatcgcgg catttacgct tgagtggtcg gatagttgga cgctgaataa
     6781 cttcacgaga ttgtttaatg aaacattata tcttgattgg tacaaaaata cactgattat
     6841 cgcggttgta acgatgatta tgcaagtaac gattgtgacg cttgcgggtt atacgtatag
     6901 ccgttaccgt tttaaaggtc gtaaaaacag cttgattttc ttccttatta ttcaaatggt
     6961 accaacgatg gcggccttaa cagctttcta cgtgttagcg atgctacttg gcgcacttga
     7021 tcaatattgg ttcttaacat tgatttacat cggtggtggg attccgatga acacatggct
     7081 gatgaaaggg tatttcgata ccgtgccgcg tgatctagat gaatccgcca aacttgatgg
     7141 cgcaggacat ttccgcattt tcgctcaaat catcttgcca cttgttagac cgatgattgc
     7201 cgttcaagct ttatgggcgt ttatgggacc gtttggggac ttcctccttg cgaaattcct
     7261 tcttagaaca ccagaaaact taacgattgc ggtaggactt caaacgttca tcgccaaccc
     7321 acaacaacaa aaagtagcct tattcgcagc gggcgccatt ttagccgcgc taccaatttg
     7381 tttactgttc ttcttcttac aaaagaattt tgtttctggc ttaactgccg gtggaacaaa
     7441 aggataattg atttttaaaa aggctgtgat atcaatgaaa aaagttccgt ttatcattca
     7501 atatgtaaaa agtacactcg gtccaaccgc tatttttgag ggtcggaaag tactgaaatt
     7561 ctggcaaatg gtcatcgtat ttattttctt aaatgcgtta ctgttgcttc ctgtttcggc
     7621 gcactttgct aatcagtcaa gctttgattt accaagttta atgccaaaaa tggcggcgct
     7681 tggcacggat caattggcga cagaagttag tgcactgacg ctcgaaaatg gggcgttaac
     7741 cgataaaaat gcgcacatcg tcgaaaaaac agcgaatggt gttgctggtg tgaatttaac
     7801 gaaagcagaa cttagtggag cgaagaatgt aattaatttc aaagaccaag aaatgacgct
     7861 tacggattcg agtggttaca cttttgaagt tagctaccca aaagacgcga ccttaagcga
     7921 aataacgtca ggcgagtcgc tcgttgattg ggtgtcggcg cagtggtatt tggaaaacca
     7981 agcatttgtt ttcctatcga tggtgctgat gattggttct atcattttcg ttagctcact
     8041 catgttaacc gtgtttacga cgcttttcat ttggatgaca aaacggagca gtttttcaag
     8101 cattgcttct tttaaagaat cagtaaattt aacgctaaat gcactgggaa ttccagtgat
     8161 tgcggcttgt attatcggct ttatctactt tgatattacg attattatgg ctgttcagtc
     8221 gctcggaatg gtgttaatga tagcatggac atttttaaag acaagatttt ataagactag
     8281 tgaaaaaagt atggctgcta gtcgctaatt aggaggtttt agtatggcac agaagcaatt
     8341 atttgaaatc gaaccatgga cattacggac aaccaaacta gataaagaaa ataaacgttt
     8401 gcaagaaagc ctaacttcac tcggtaatgg ttacatgggg atgcgcggga attttgaaga
     8461 aggatactcc ggcgacggcc atattggaac ttattatgca ggcgtgtggt ttccagataa
     8521 aacaagagtt ggttggtgga aaaatggcta cccggattat ttcggaaaag tcattaatgg
     8581 ccttaatttt atcggaattg aagtacgtct tgacggtgaa aaactcgatt tatttgtaga
     8641 tgaagtaagc gattttgaac ttgttttaga tatggaaaaa ggcgttttga gacgtcaatt
     8701 cacagtagtt aaaaataata agacattccg gatttcggcg gaacgattcc taagtgttgc
     8761 aacgaaagaa cttgcggtta ttcgttatca agtggaagcg aagagcgctg caaaagtgga
     8821 tttaacgtcc tttttagatg gcaatgtgca aaacgaagat gccaactatg aagaaatgtt
     8881 ctggcaagaa gtcgaaaaag cttcatcagc aagtcgcggt tcacttgtca caaaaactat
     8941 tccaaacaac tttggaacac cgcgtttcac cgtttcagct gtgatggaaa atacgaccaa
     9001 tacggcaaac caaacaaatc aaacaaaggc actttacgcc gaaaatcatt ttcaattcga
     9061 cctaaaagaa aatgaagtag cgcaaataga aaaacgtgta gtcattacga catctcgtga
     9121 ttatgaggaa agggaaattc ttccagcagg agaaaaaatc ttacaaagct tagaagcaaa
     9181 aacgtatgat gaattattag ccgcgcatgt tgcgggttgg cgtgaacgtt gggataaagc
     9241 ggatgtcgag attgcaggcg acgattccgc gcaacaaggt atccgattta acattttcca
     9301 attatttgct acttattacg gtgaggacgc aagactaaac attggtccta aaggctttac
     9361 aggcgaaaaa tatggcggcg cgacatactg ggatacagaa gcttttgcac taccaatgta
     9421 tttatcgtta acggataaat ctgtgagtca caatttactt aaatatcgcc acgatcaatt
     9481 ggatggagcg aaaatcaacg cgcagaaaat tggcctagct ggcgcactgt atccaatggt
     9541 tacttttacc ggagttgagt gtcataatga atgggaaatt acatttgaag aaattcaccg
     9601 caatggcgcg attgcttatg cgatttacaa ttacacaaat tacactggcg atgattcgta
     9661 tttaaaaaca gatggaatcg aagtattgac tgaaatcact cgtttttggg ccgaccgcgt
     9721 tcatttatct gatcgcttag ataaatacat gattcacggt gtaacgggac caaatgaata
     9781 tgataataac gtcagcaata actggtatac aaactatatc gccgcttgga cgattcgtta
     9841 tacgctagaa aacttagatg cagaagcgaa aaaacgttta ggtgtgaccg agtacgaaat
     9901 cgccaaatgg gaagatattg agcatcgcat gtattatcct tttgacgaga aatggcagat
     9961 ttttgtgcaa cacgatacgt tcttagataa agagttacgt tccacggata cattaaaacc
    10021 agaagatatg ccgattaacc aaaattggtc ttgggataaa attttacgtt cttgtttcat
    10081 taaacaagca gatgtccttc aaggtttata tttattctat gatgactttg attttgatac
    10141 aaaacaacgt aactttgaat tctatgagcc attaacagta cacgaatcta gcttatcgcc
    10201 agctgttcac gcagtgttag cttcagaact tggtaaatat gataaagcag tagaactata
    10261 caaacgtaca gcaagactag atcttgataa cattaacaac gatacagaag atggactgca
    10321 cattacctct atggcaggaa gctggttatc catcgttcaa ggctttgctg gtatgcgagt
    10381 aactgatggc gaattaagct ttgcaccatt cttacctgat ggctgggaaa attaccgttt
    10441 caaaatcaac ttccgagatc gtttgttaga agtgaaagta gaaagaaata gtgtggaaat
    10501 aacactactt gcaggaaaag cttttgaaat taacttatat ggagaaccac aggagcttca
    10561 ttcaactgta aatgtaacta aatgaaaaat gaaaaactcg tatcagatag cctgatgcga
    10621 gttttttgat gatacttttt cgatactttt tgaaagttaa tttgtcttat acttagttta
    10681 tcagctgata ataaatcaaa aggggatcgg ataatggcaa atttgaaagt aatagaaaat
    10741 gaagcaacta ttctagcttc tatacctaaa cataatgttg attacaatgc tagagtaatg
    10801 caatctgttt ctgttgacta cgagcgagat atgatttact ggacgcaaca gtacagcgga
    10861 aaaaaaatga ctgatgctgg agctggggag tcatataaca ttacgaggac agatttgaaa
    10921 ggaaattaca ttgatcaaat gtggtgttta aacggtgggc atggaacaaa tattgcactt
    10981 gattataatt tagaaagtaa aaaaatgcat atttggtcgg catataaaat taacaataaa
    11041 tgggaagtgg tttgttaccc ttatgaaagt aataaaatcc taaagggaac cgagtccagt
    11101 attttcattt caaaagtaga gagtggcagc tataaccgaa tttcaggaga tttgaaaaac
    11161 gatatgttgg tttttcattc aggtggagat cctaaaacgt ttaatattag aatcgtgcgt
    11221 gcttcctctg taagagaggg aaagcttgaa gtactttata aagtaaaggc aactgaagca
    11281 aatgatgcat atgtttacca agggtgtgcg ttagattttc catatttata tacagcttct
    11341 ggtactggtg gcgttgaaga accaaaacaa ttaacttgcg tggatatagt aactggaaaa
    11401 cgtgtgtatc aaacaacatt taagttcaat acaaaagcaa tgcaaaccac agaaagcaat
    11461 tttgcagaac cggaaaatgt ttgtgtatat tataaaaata accaaaagca tattgtagta
    11521 ggatatgctt tgggaggagc agggaatcgt atgaatagag catttgatct tgtagaaaat
    11581 aatagtgaaa acatagaaac agaaattgaa agtttaagaa accttattat aagtagaaaa
    11641 cgtacagaag ttatttttga tcaaagtact aaaggggata tgacaacaaa ttttaaatta
    11701 cgtgaaacgt taaataattt tgatattatc caagttgtcc ttgaatctgg tggggggtat
    11761 acaactgcat ctcgactcgt atcgccaaaa ctattcgagg catctaaatc atttattttt
    11821 gcttcgagta atattggtga tactagtgga aataatgtag atatgtacga atacgctgct
    11881 aattttaatg atgacttaac atcttttaag aatgatcgtg cagtcaaaat cgaagtttca
//
LOCUS       DASDYO010000098        11924 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.098, whole genome shotgun sequence.
ACCESSION   DASDYO010000098 DASDYO010000000
VERSION     DASDYO010000098.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11924)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11924)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11924
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.098"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            216..905
                     /locus_tag="U0290_002186"
     CDS             216..905
                     /locus_tag="U0290_002186"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FadR family transcriptional regulator"
                     /protein_id="HEM2302224.1"
                     /translation="MVEKIERKSLAEQVYDQIKAEITNGTWKIGERIPKEADLMAEFG
                     ISRNTLREAIRALSHIGLLETKQGDGTFVRNNSELNAIMQRRVRESTVQEILEIRHAL
                     DREAVILACDRRTEEDVKTLEKYRHQCQLATEKNDVGAFVKADSALHLTIVKAAHNDL
                     LLDMYVNILEEIQFSITSTTEMSPEANQHNGHAALVKAIEKRNKEQAAHEVTEYITLF
                     KRIDAKNGEKK"
     gene            902..2119
                     /locus_tag="U0290_002187"
     CDS             902..2119
                     /locus_tag="U0290_002187"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CynX/NimT family MFS transporter"
                     /protein_id="HEM2302225.1"
                     /translation="MNSDLTNKKILTRSSKVMLVLGIILIAANLRTPITSVGPLLGMI
                     QSDLHLTNTMAGLLTTIPLLAFAGLSPFVSKLSRALGIEVLIFVALLTLVLGSLLRPF
                     GGELNLFAGTFMIGLAIAVGNVILPSLIKKEFPFKLGLMTGVYSISMNLCAAIAAGLT
                     VPIAMNNRFSWHGSMVFWAILGIVALVIWLPQLKYNQRSTEKIATHLVTTSVWKSPLA
                     WKISLFMGSQSAIFYISIAWLPNILADQGLSSTSSGLMLSLMQFAVMPITFIIPIVAG
                     RMKNQQLLVGISILFFLIGIFGIMFASGSVLILSIAIIVYGIGSGMSFSLSMMFFNLR
                     TTSATESADLSGMAQSIGYLFAASGPILFGTLHDALGSWQPTLYVLVGITMLMLYCGL
                     DAGRNKFLFPQKK"
     gene            complement(2318..2545)
                     /locus_tag="U0290_002188"
     CDS             complement(2318..2545)
                     /locus_tag="U0290_002188"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3006 domain-containing protein"
                     /protein_id="HEM2302226.1"
                     /translation="MKKAILDRIEDGKAVFLLEPDQTEWQIDKEKLDSSIKEGDVVTF
                     SETNEIMKHPQETEEMKNRIAEKLERLRGRN"
     gene            complement(2555..3685)
                     /locus_tag="U0290_002189"
     CDS             complement(2555..3685)
                     /locus_tag="U0290_002189"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2302227.1"
                     /translation="MTKKLVICISLIAIFLSGCSFSEPSTSKSNITEKTLNGASFTFF
                     DVGQGDSTLIQAEDGTTILIDTGRQDDDRILTYLKEANIKKIDLLLLTHPHADHIGNA
                     DKVIATYKPKEIWMDGLTFSSSIYEKVIDAALASDAKYKEPRRGEKATFGPFNLEVLS
                     PDKLENDANNDSIAVKITYKDISAIFTGDAEKGREREMVDSGADLEADILDLGHHGSS
                     TSNQPFFLDKVKPQVAVYSAEMANSYGHPHVEVLEWLKERDIKTYGTDVNGTVIIETD
                     GEKIHVQTEKSGTPKAGSSYNKENSTQKTEDATSEELPDSINLNTASSEELQLLPLIG
                     PALAEKIIAERPYQSIDDLKKINGIGDGIVRQIKEQGIAVTK"
     gene            complement(3798..4100)
                     /locus_tag="U0290_002190"
     CDS             complement(3798..4100)
                     /locus_tag="U0290_002190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HesB/YadR/YfhF family protein"
                     /protein_id="HEM2302228.1"
                     /translation="MNIEVTDQANKWFHDEFDVANGNGIRLFAKYGGSNSSLHPGFSI
                     GLTAEKPQEAAVAEKKEDLIFFIEDHDYWYFKDHDWKIDYEPKTEEVLFSFKEKVK"
     gene            complement(4334..4804)
                     /gene="fri"
                     /locus_tag="U0290_002191"
     CDS             complement(4334..4804)
                     /gene="fri"
                     /locus_tag="U0290_002191"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="non-heme iron-binding ferritin Fri"
                     /protein_id="HEM2302229.1"
                     /translation="MKTINSVDTKEFLNHQVANLNVFTVKIHQIHWYMRGHNFFTLHE
                     KMDDLYSEFGEQMDEVAERLLAIGGSPFSTLKEFLENASVEEAPYTKPKTMDQLMEDL
                     VGTLELLRDEYQQGIELTDKEGDNVTNDMLIAFKASIDKHIWMFKAFLGKAPLE"
     gene            5007..6812
                     /locus_tag="U0290_002192"
     CDS             5007..6812
                     /locus_tag="U0290_002192"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HSP90 family protein"
                     /protein_id="HEM2302230.1"
                     /translation="MENYSHRFQVNLAGMIDILSNHLYDEKDVYIRELLQNATDAIRT
                     RKKIDSTLEGKIHASLTGDNNEKTLIVEDNGIGLTEDEVHAFLATIANSSKGEKNFDG
                     ESSNDFIGRFGIGLLSCFIVSDEIVMISTSKKDGGTTEWRGKADGTYSVRKIETETRE
                     PGTQVYLRLRADLDEHPECEDVEELINTLKKYGSSLESNIIVEINGLEEEINSWTKQF
                     SNKETLSKLSKDQIIQYGEYILGTRFQDYFLIENESGRTFGIAYMIPHAVQMNAIRKN
                     TVFLNNMYVTSEANNILPDWSFFAKCVIWTDELQPVASREAFYKNERLTSVADELGVA
                     LKKGIETLPEEALMKLLATHYLGFKALASEDAPFLKLIYPYLPVRTLNGEEKLGDIIA
                     KNDVIYYTYSVDDFRQIKDIARSSGMTLINGGYSYDSPILAQLSYFVEGTEFVLIEPE
                     EMTNKLRPMTVSEEQAYQPILTEMNSMMAEFDTDVLIKHFEPKDLPTIFIHSTATQEL
                     RELERAVEETNSVFSDILESIQKEQEPAPLAHLYLNLDNELIKRLFTSGKTVKELSVI
                     VNVLYIQALLLGHYPLKRKEMVLMNQNMLRILEML"
     gene            6824..7792
                     /locus_tag="U0290_002193"
     CDS             6824..7792
                     /locus_tag="U0290_002193"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302231.1"
                     /translation="MDYLNDLESVWGMDDTPEKIKVLERIIAGADLYNNIDDGIEARD
                     LLIDTCLTAGFPKKQLQAFSWLIKKWEDKDSDAYIDTEDLFWKYKWISEHVPTFDEVS
                     KAQIDGLLNDMKVKFEQENYSLRPYYKVCTLAAMRMGDVEKAKELFKKWSDTKADFLN
                     DCPACERNDQVHYYCFIKDYETAKKTAKPIIEGKQRCAEVPHLTYGNMALAYLALGDE
                     KMAQECFDKGYPLVEKQISLLPPLGQLLKYLVLTKQTEKAREVIDTNLETVLKAEGGL
                     DRLIFLQAAYPLFDREKEADLVEMTEALTAKFDARNGNSYYQDLLK"
     gene            7888..8634
                     /locus_tag="U0290_002194"
     CDS             7888..8634
                     /locus_tag="U0290_002194"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726335.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEM2302232.1"
                     /translation="MTIWVKNEKNGATEQVIREKEIALGVTLPFEYKQLLSEQNGGLI
                     RKNHFKTTEPTSYGLDFGEIYYLASLDEILTDIPEQKDVDLAGKQVYFHRDESRYIGF
                     SYIDNTSEPSIIYVDFETLQTLIVAETFATFIEELYFSPFPTDFAEHFPIKKLNQILA
                     SSNVQKTKQLLELLEDYPDKKWYLATFLGLLEKQEIPYNLVVYRLFENQLLYFRRKLA
                     PELVEQIFVRLEACDGINKAALAELYKEWK"
     gene            8647..9105
                     /locus_tag="U0290_002195"
     CDS             8647..9105
                     /locus_tag="U0290_002195"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464463.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="low molecular weight phosphotyrosine protein
                     phosphatase"
                     /protein_id="HEM2302233.1"
                     /translation="MLKVVFVCLGNICRSPMAEGLFRKEVAEAGLTNEIKIDSAATGT
                     WNLGKPPHRGTQAVLKKHGVDYQEMRARKISDVDFNEADFIIGMDQQNLADLNALNNN
                     PDVIVRSLMSFVPGQEDKDIPDPYYTGDFDETERMVTEGVKALLAYITKK"
     gene            9193..9354
                     /locus_tag="U0290_002196"
     CDS             9193..9354
                     /locus_tag="U0290_002196"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464462.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lmo0937 family membrane protein"
                     /protein_id="HEM2302234.1"
                     /translation="MLGIIWGIIVVLLAVWLLGIIFHIAGGLINILLVIVLILVIWNL
                     IQMARNKRK"
     gene            complement(9404..10144)
                     /gene="nfsA"
                     /locus_tag="U0290_002197"
     CDS             complement(9404..10144)
                     /gene="nfsA"
                     /locus_tag="U0290_002197"
                     /EC_number="1.5.1.38"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464461.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxygen-insensitive NADPH nitroreductase"
                     /protein_id="HEM2302235.1"
                     /translation="MNQAIDAILGHYSVRKFEDKDLTEEALTLLIKSAQAASTSSFVQ
                     AYSIIGITDKGVREQISAIAGNQPYTVQTGQLFIFVADLARHHAILEEHQVDTTALET
                     SEKWLVSVIDAALAAQNMAVAAESLGLGICFIGGIRNDVEQISEILDLPPYTMPLFGL
                     TIGYPVANKEKAKPRLPQDLVYHENTYQKMNPTILTEYDEQIKNYYDERTAGKRVEGW
                     SEQIARGLGRPSRLDLKAFMEKQHLNQK"
     gene            complement(10157..10666)
                     /gene="trmL"
                     /locus_tag="U0290_002198"
     CDS             complement(10157..10666)
                     /gene="trmL"
                     /locus_tag="U0290_002198"
                     /EC_number="2.1.1.207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464460.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA
                     (uridine(34)/cytosine(34)/5-
                     carboxymethylaminomethyluridine(34)-2'-O)-
                     methyltransferase TrmL"
                     /protein_id="HEM2302236.1"
                     /translation="MPNHIVLYQPEIPANTGNISRTCAGTDTYLHLIRPLGFSTDDKM
                     LKRAGLDYWDNVKLSYYDSLDEFFEKNEGGEFYYITKFGRHVYSDIDYSDPNKDYFFV
                     FGKETTGLPDALLQKNEENCLRIPMTDHIRSLNLSNTAAILAYEALRQQNFGALLQEP
                     NYDRKIFQD"
     gene            complement(10687..11826)
                     /gene="queG"
                     /locus_tag="U0290_002199"
     CDS             complement(10687..11826)
                     /gene="queG"
                     /locus_tag="U0290_002199"
                     /EC_number="1.17.99.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464459.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA epoxyqueuosine(34) reductase QueG"
                     /protein_id="HEM2302237.1"
                     /translation="MIVKSTSDYAALKEELIAYAHEIGIQKIGFTTADPFLFLKERLL
                     EAEALDLFTGFEHPVIDERVYPELIFKEPQSIIAIALAYPSKLKEAPISKKGARRGVF
                     ARASWGIDYHTVLREKLALLETFLSERLPDVRMKSMVDTGELSDVAVAERAGIGWRGK
                     NTLLITPEYGSWVYLGEMITNIPFEPDTPASDLCGSCNQCVKACPTGSLLGEGKMNPK
                     ICLSYLTQTKDFLDEKYREVLHNRLYGCDTCQVVCPYNRGHDFHFHDEMEPDPELVRP
                     ELKPLLHISNRAFKEQFGDMAGSWRGKKPIQRNAIIILARYKDKTAVPDLIDCLQNDP
                     RPVIRGTAGWALRKIGGSDAEKAVEQALQTEQDEQVLQELTAITN"
BASE COUNT         3569 a         2153 c         2290 g         3912 t
ORIGIN      
        1 tacttctgag taaatataaa acaatgccta gaagaacaaa cactagcacc cgtcttgcag
       61 tgtcgttttc ttttagcttt tctaaccaat tcatattttc accagccctt ttcttccttc
      121 attttatcat agtttaacaa aataaggttt acaaaaaaag aattcttccg taaaatagaa
      181 ccaatcatcc tacctttaga aatggagtga atagtatggt agaaaaaatt gaacgcaaat
      241 cgcttgcaga gcaagtttat gatcaaataa aagcagaaat tactaacggt acttggaaaa
      301 tcggtgaacg cattccgaaa gaagcggatt taatggctga atttggcatt agtcgtaata
      361 cgctacgtga agccattcgt gccctatctc atatcggttt actggaaacc aaacaaggtg
      421 acgggacttt tgttcgtaac aatagtgaac taaatgctat catgcagagg cgtgtccgcg
      481 aatccacggt tcaagaaatc ctggaaattc ggcatgcgct tgacagagaa gcagttattc
      541 tggcctgtga tcgacgcacg gaagaagatg taaaaacact agaaaaatat agacaccaat
      601 gccaactagc gacggaaaaa aatgatgttg gtgcttttgt gaaagctgat tctgcccttc
      661 atttaacaat tgtaaaggca gctcataacg atttgttgtt agatatgtat gtcaatattt
      721 tagaagaaat acagttttcc atcacgagta caaccgaaat gagcccagaa gctaatcagc
      781 ataatgggca cgctgcgctt gtcaaagcga ttgaaaaacg aaataaagaa caagcagctc
      841 atgaagtaac agagtatatt actcttttca aacgaattga tgctaagaat ggagaaaaga
      901 aatgaattca gatttaacca ataaaaaaat ccttacacgc tcgagtaagg taatgcttgt
      961 tttaggaatt attttaattg cggcaaactt acggacacca attacctctg taggtccgtt
     1021 acttggaatg attcaatcag atttacattt aaccaatacg atggctggat tacttacaac
     1081 aattccgcta cttgcatttg caggactatc cccgttcgtt tctaagctaa gtcgagcact
     1141 tggtatagag gtattaattt ttgtagcact attgacactt gtacttggta gcttacttcg
     1201 accttttggg ggcgaactca atttatttgc tggaacgttt atgattggtc ttgctattgc
     1261 tgtcggaaat gtcattttgc caagtttgat aaaaaaagaa tttccattta aattgggtct
     1321 aatgactgga gtttattcca tttcgatgaa tttgtgtgca gcgattgcag ctggcttaac
     1381 ggttccaatt gctatgaaca atcgctttag ctggcatgga agtatggttt tctgggcaat
     1441 tcttggaatc gttgctttag tcatttggct tccacagtta aaatataatc aacgctcgac
     1501 ggaaaaaatt gcaactcact tggttacaac ttcggtttgg aagtctccgc ttgcgtggaa
     1561 aatttcttta tttatgggtt cgcagtcagc aattttttat atttcgattg cctggttacc
     1621 aaatattttg gcggaccaag gattatctag tacttctagt ggcttaatgc tctccttaat
     1681 gcagtttgcg gttatgccga ttacgtttat tattcctatt gttgccggac gaatgaaaaa
     1741 tcagcaatta ctagttggaa tttctatttt attcttttta attgggattt ttggcattat
     1801 gtttgcttct ggtagcgtgc ttattttatc gattgctatc attgtatacg gaattggttc
     1861 ggggatgtca tttagtttgt cgatgatgtt ctttaatttg cgaacaacaa gcgctaccga
     1921 atcagcggat ctctctggaa tggcgcaatc tatcggttac ttgtttgccg cttccggtcc
     1981 gatattattt ggtaccctgc atgatgcgct tggtagctgg caaccaacct tatatgtttt
     2041 agtcggtatt accatgctta tgctatactg cggcctagat gctggacgca ataaatttct
     2101 ctttccacag aaaaagtgat ttttgcgcat aaaaaaacta gtgcggaaaa agggagtaaa
     2161 ccgcactagc taaaagggag tttgggattt tcattctaaa aagggaaaga aatgaaaatg
     2221 ttttgcttgt tgttagctta tacatataat aacttttcaa aaaaagaatg tgctgaaaga
     2281 aagatgataa tttcatgaga gtttaaaaaa gtttttctca gtttctccct cttaatcttt
     2341 ctagcttttc tgcaattcta tttttcattt cttccgtttc ttggggatgt ttcattattt
     2401 cattagtttc tgaaaaagtg acgacatctc cttcttttat ggatgaatcg agcttttctt
     2461 tgtcaatttg ccattctgtt tggtctggtt ctaataaaaa aactgctttg ccatcttcta
     2521 tccgatctaa aattgctttt ttcaccctaa tcacctactt tgttacggca atgccttgtt
     2581 ctttgatttg gcgcacaatg ccatcgccaa tgccgttaat ttttttcaag tcatctatgg
     2641 actgatatgg tcgctcggca atgatttttt ctgcaagcgc tggcccaatt agtggtaata
     2701 attgtaattc ttcactagat gctgtattta aattaatgct gtctggtaat tcttctgatg
     2761 ttgcatcttc tgttttttgc gtgctatttt ctttattata gctgctacct gcttttggtg
     2821 tacctgattt ttcggtttgc acatggattt tttcaccgtc tgtttcaatg attaccgttc
     2881 cattcacatc tgttccatat gtttttatat cacgctcttt taaccactcc agcacttcca
     2941 catgaggatg tccgtaacta ttggccattt cagcagagta aacagccact tggggtttta
     3001 ctttatctag gaaaaatggc tggttggatg tggacgatcc gtggtgccct aaatctaaaa
     3061 tatccgcttc taaatcggca ccgctgtcta ccatttctct ttctcgacct ttttctgcgt
     3121 cacctgtaaa aatagcggaa atatctttat aggtgatttt tacagcgata gaatcattat
     3181 tagcgtcatt ttccaattta tcagggctta aaacctctag attaaatgga ccaaaagtcg
     3241 ctttttcgcc gcgtctcggt tctttgtatt tggcatctga agctaatgct gcgtcaatta
     3301 ctttctcgta aatactacta gaaaaagtta agccatccat ccaaatttct ttcggtttgt
     3361 atgtagcgat tactttatca gcattaccga tatggtctgc gtgcgggtgt gtcagtagca
     3421 gcaaatctat tttctttata ttcgcttctt ttaaataggt taaaatacgg tcatcatctt
     3481 ggcgacctgt atcaatcaaa atagttgtac catcttctgc ttggataagt gtgctatccc
     3541 cttggccaac atcaaaaaat gtaaaacttg caccattcaa tgttttttcg gtaatgttcg
     3601 atttactcgt tgatggttcg gaaaaactac aaccgcttaa aaatatcgcg attaaactta
     3661 tacagattac taatttcttt gtcatctttc tcctcctgct ctcttagtag aatagcaaag
     3721 gaaggcgaaa cagtaaagtt tttaaaacaa aaaccgcctg aaatcaattt gattacacgc
     3781 ggtcatttat gttggattca tttcactttt tctttaaagg aaaaaagtac ttcttccgtt
     3841 tttggttcat agtcaatttt ccagtcgtgg tctttgaaat accaatagtc atggtcttca
     3901 atgaagaaaa ttaagtcttc tttcttctca gcgactgctg cttcttgcgg tttttcggca
     3961 gttaaaccga tagagaaacc aggatgcaag gaactgttag aaccaccgta tttcgcaaaa
     4021 agtcgaattc cattaccatt agctacatca aactcatcat gaaaccattt atttgcttgg
     4081 tccgttacct cgatattcat acttttcact cctcgtttcc aattttttcg taatgattgt
     4141 tattcaagaa tagcagattt cttggtgaat ttcacttttt ctgctttttg ttatgaagat
     4201 aatatacctc tttcaaagaa actttaaacc acattgtgtt aagacaatgt aaaaataagg
     4261 aaattgtact ataacagact ggggcaaaaa aaactgtgtg agacgattaa tcccacacag
     4321 tttttataac tctttattct aatggcgctt ttcctaagaa tgctttgaac atccagatat
     4381 gtttgtcaat gcttgctttg aaagcaatta acatatcgtt tgttacgttg tcgccttctt
     4441 tgtcagtaag ctcaatacct tgttgatatt cgtctctaag taattctaat gttccaacta
     4501 agtcttccat taattgatcc attgtttttg gtttcgtata aggagcttct tcaacgctcg
     4561 cattttctaa aaactctttt aaagtcgaga atggacttcc gccgattgct agtaagcgtt
     4621 ctgctacttc gtccatttgt tcgccgaatt cgctatataa atcatccatt ttttcatgta
     4681 aagtgaagaa gttgtggcct ctcatatacc aatgaatttg atgaattttt actgtgaata
     4741 cgtttaggtt cgctacttgg tgattcaaaa attcctttgt gtctactgag ttgattgttt
     4801 tcataattat cttcctccta ttttataata attatcactt aataataagt ataatctatt
     4861 tccacatcaa tgtccagtgt ggaaaccatc acaaagtatt taccactgat ataaattctt
     4921 aaacatctat tattgttttc tcattattta tctcttcttt tatgatagaa taaaaaggac
     4981 ttttgtacaa ctaggaggac caagctatgg aaaattattc tcaccgcttt caggtgaact
     5041 tggctggtat gattgacatt ctctcaaacc acctttatga cgaaaaagat gtttatattc
     5101 gcgaattact gcaaaatgca accgatgcca ttcgcaccag gaaaaaaatc gattcaactt
     5161 tagaaggtaa aatccatgca tctctaactg gagataataa tgaaaaaaca ttaattgtag
     5221 aagacaacgg aattggttta acggaagatg aggttcacgc ttttctagct actattgcta
     5281 attcatcaaa aggcgaaaaa aactttgatg gagaaagttc caatgacttt attggtcgtt
     5341 ttgggattgg tttactttct tgttttattg ttagtgatga aattgtaatg atttctactt
     5401 ccaaaaaaga tggtggcaca acagaatggc gcggaaaagc ggacggaact tattcggttc
     5461 ggaaaataga aacggaaact cgcgaaccag gtacacaagt gtatttgcgc ttacgagctg
     5521 atttagacga gcaccctgaa tgcgaggacg tagaagaatt aatcaataca ctcaaaaaat
     5581 atggttcctc tttggaaagt aatataatag tagaaattaa tggtttagaa gaagaaatta
     5641 atagttggac caaacagttt tccaataaag aaaccttgtc taaactatca aaagatcaaa
     5701 ttattcagta cggcgaatat atccttggaa cgcgtttcca agattatttc ttaattgaaa
     5761 atgagtcagg aagaacgttt gggattgctt atatgattcc tcatgctgtt caaatgaatg
     5821 ctatccggaa gaacacggta tttttaaata atatgtatgt cacaagtgaa gcaaataata
     5881 ttttgcctga ttggtcgttt tttgctaaat gcgtgatttg gacggatgag cttcaacctg
     5941 ttgcttctcg tgaggcgttt tataaaaatg agcgattaac tagtgttgcc gacgagcttg
     6001 gcgttgcttt gaaaaaagga attgaaactc ttccagaaga agcattgatg aaattattag
     6061 ctacacatta tcttggtttt aaagcacttg cgagtgaaga tgcaccattt ttaaaattaa
     6121 tctatcctta tcttccagtt cggactttga atggcgagga aaaattaggt gatattatcg
     6181 ctaaaaatga tgtcatttat tacacctact cggtcgatga ctttagacaa attaaggata
     6241 ttgctagatc aagcggtatg acgcttatta acggcggcta ttcctatgat tcgccaatct
     6301 tagcgcaatt aagttacttt gttgagggga cagaatttgt tttaatcgaa ccggaagaaa
     6361 tgactaataa attacggcct atgacagtga gcgaagaaca ggcttaccaa cctattttga
     6421 cagaaatgaa tagtatgatg gctgaatttg atacagatgt attaattaaa cattttgaac
     6481 cgaaagattt accgactatt ttcatccact ctacagcaac acaagaatta cgcgaactag
     6541 aacgtgctgt cgaagaaaca aattctgttt ttagtgatat tttagagagc atccaaaaag
     6601 aacaagaacc tgcaccgctt gctcacttgt atttaaattt ggataacgag ctgattaaaa
     6661 gacttttcac ttctggaaaa acagtgaaag aattgtccgt aattgtgaat gtactttata
     6721 tccaagcctt actattaggg cattatccgc ttaaacggaa agaaatggta ttaatgaatc
     6781 aaaatatgtt acgaatctta gagatgctat aggaggaaga aaaatggatt atttgaatga
     6841 tttagaatca gtttggggaa tggatgacac gcctgaaaaa ataaaagtat tagaacgaat
     6901 tattgctggt gcagatttgt ataacaatat agatgatggc attgaagcac gtgatctgtt
     6961 gattgacaca tgcttaacag ctgggtttcc gaaaaagcaa ttacaggctt ttagctggtt
     7021 aatcaaaaaa tgggaagaca aagatagtga tgcttacatt gacacggaag atcttttttg
     7081 gaaatataaa tggattagtg aacatgtccc gacttttgat gaagtatcga aagcgcaaat
     7141 tgacggactt ttgaatgata tgaaggtgaa attcgaacaa gaaaattatt cgctaagacc
     7201 ttattataaa gtgtgcacgc ttgcagccat gcgtatgggc gatgttgaaa aagccaaaga
     7261 gctatttaaa aaatggagtg atacgaaagc agacttttta aatgactgtc ctgcttgcga
     7321 aagaaatgat caagtacatt attattgctt cattaaagac tatgaaacag ctaagaaaac
     7381 agcaaaaccg attattgaag gaaaacaacg ctgtgcggaa gttcctcatt taacgtatgg
     7441 aaatatggcg cttgcatatt tagcgcttgg agatgaaaaa atggcgcaag aatgctttga
     7501 taaaggttat ccccttgtgg agaaacaaat ctccttacta ccaccacttg ggcaattact
     7561 taaatattta gtccttacca agcaaacgga aaaagcgcga gaagtgattg ataccaactt
     7621 agaaactgtt cttaaagctg agggtggttt agaccgactt attttcttac aagcagccta
     7681 ccctcttttc gaccgagaaa aagaagctga tttggtagaa atgacggaag ctttaacggc
     7741 gaagtttgat gcgcggaatg gaaatagtta ttatcaagat cttttgaagt aaaattttgg
     7801 aacatagtta ggaattattt ctagctatgt tcttttgttt gcgctatttt gcttttttta
     7861 ggataataca gggaggagtt gaagaggatg acgatttggg ttaaaaacga aaagaatggc
     7921 gcaactgaac aagtaattcg tgaaaaagaa atagcgttag gcgtcacttt accatttgaa
     7981 tacaaacagc ttttatcaga gcaaaatggt ggattgattc gcaaaaatca ttttaagacg
     8041 acggaaccga cttcttatgg actagatttt ggtgaaatct attatctggc tagtttggat
     8101 gaaattttaa cggatattcc ggaacaaaag gatgttgatc tcgcagggaa gcaagtttat
     8161 ttccaccggg atgaatcgcg ctatattggt ttttcttata tagataatac gtccgaaccc
     8221 agtattattt atgttgattt tgaaacgtta caaacactta ttgttgctga aacgtttgct
     8281 acatttatag aggaattgta ctttagtccc tttcctaccg atttcgcgga acattttccc
     8341 ataaaaaaat taaatcaaat tctcgcttcc agcaatgtgc aaaaaacaaa acaattactg
     8401 gaactattag aagattatcc agataaaaag tggtatttag cgacattttt aggattactt
     8461 gaaaaacaag aaatcccgta taatttagtt gtctatcgtt tgtttgaaaa tcaattgctt
     8521 tatttccgga gaaaactcgc gcctgaactt gtggagcaaa ttttcgtccg actggaagca
     8581 tgtgatggga taaataaagc ggctctggcc gaattatata aggaatggaa ataaggagga
     8641 attcaattgt taaaagtagt ttttgtctgt ttagggaata tttgtcgttc accaatggct
     8701 gaggggttat ttcggaaaga agttgcagaa gctgggttaa cgaatgaaat aaaaattgat
     8761 tctgctgcaa ctggtacttg gaatttaggg aaaccgccac accgcgggac gcaagcagtg
     8821 ttgaaaaagc atggtgttga ttatcaagag atgcgagctc gaaaaatttc tgatgttgat
     8881 tttaacgaag ctgattttat tatcgggatg gatcagcaaa atttagcaga tttaaatgca
     8941 cttaataata atccagatgt catcgttcgc tcgcttatgt cctttgtgcc tggtcaagag
     9001 gataaagata ttccagaccc atattataca ggggattttg atgaaaccga acgcatggta
     9061 actgagggag taaaggccct tttagcttat atcacaaaaa aatagtctgt ttttagccct
     9121 aatatgttta aagactgacc tcacgggaat atataagagt acaatcaaaa gtgcagaaag
     9181 aggtttttat acatgttagg aattatttgg ggaatcatcg tagttttatt agcagtgtgg
     9241 ttacttggaa ttattttcca tattgcgggt ggattaatta atatcttgtt agtaatcgtt
     9301 ttaatactcg ttatttggaa cttaattcaa atggctagaa ataaacggaa ataaccgaaa
     9361 aagaacggta cggcgcatta agataatgcg ccgtaccgtt cttttatttt tgatttaaat
     9421 gttgtttttc cataaatgct tttaagtcta gccggcttgg tcttccaagc ccacgcgcaa
     9481 tttgttcgga ccaaccttct actcgttttc ctgctgttct ttcgtcgtag taatttttta
     9541 tttgttcatc atattcagtt agaatagttg ggttcatttt ttggtaggtg ttttcgtggt
     9601 ataccaaatc ttgaggcaat ctcggtttcg ctttttcttt gttagcaacc ggataaccaa
     9661 ttgtcaagcc gaataatggc atcgtatatg gtggtaaatc aagtatttcc gagatttgtt
     9721 cgacatcgtt acgaatcccg ccaataaagc aaatgccaag tcctaatgat tctgcggcaa
     9781 cggccatatt ttgtgcagca agtgcggcat caatcacaga aacaagccat ttttctgacg
     9841 tttccagtgc agttgtatcc acttgatgtt cttctaagat ggcgtgatga cgagctaaat
     9901 cagcaacgaa aataaatagt tgaccggttt gtactgtata tggttgattt cctgcaatgg
     9961 ctgagatttg ttcacgaacg cctttatctg ttattccgat gatggagtat gcttgaacaa
    10021 aactggatgt agatgcggct tgtgcactct tgataagtaa ggtcaacgct tcttccgtta
    10081 agtccttatc ttcaaatttt cgcactgagt aatgtcctag aatagcatct atcgcctgat
    10141 tcatcctaac tcccccttag tcttgaaaaa tttttcgatc gtaattcggt tcttgtaaaa
    10201 gtgcgccaaa attctgctga cgtaacgctt cataagctaa aattgccgct gtgttcgata
    10261 aattcaacga acgaatatga tctgtcattg gaatacgcaa acaattttct tcattctttt
    10321 gtaaaagcgc atctggcaat ccggtcgttt cttttccaaa aacgaagaaa taatctttgt
    10381 ttgggtcact ataatcgata tcactataaa catgacgacc aaatttggta atgtagtaaa
    10441 attctccgcc ttcatttttc tcgaagaatt catctagaga atcgtaatag gaaagtttta
    10501 cgttatccca gtaatcaagt ccagcacgtt ttaacatttt atcatctgtc gaaaaaccaa
    10561 gtggacggat taaatgtaag taagtatccg tcccggcaca tgttctggag atatttccgg
    10621 tattcgctgg gatttctggt tgatatagta cgatatggtt tggcattgct tttcacctgg
    10681 tttctattaa tttgttatgg ctgttaattc ttgtaatact tgttcatctt gttcggtttg
    10741 aagtgcttgc tcgacagctt tttcggcatc gcttccaccg atttttctta gcgcccagcc
    10801 agccgttcct cgaatgactg gtcttggatc gttttgtaaa cagtcaatta agtctggtac
    10861 agctgtttta tctttatacc gcgctagaat aatgatggca tttcgctgaa tgggcttctt
    10921 cccacgccac gaacccgcca tatcgccaaa ttgttcttta aaagcgcgat tggaaatgtg
    10981 taatagtggt tttaattctg gtcgaacaag ctctggatcc ggctccatct catcatgaaa
    11041 gtggaaatca tgcccacgat tatacggaca aactacctga caagtatcac aaccatacaa
    11101 acgattatgc aacacttcgc gatatttttc atctagaaag tcttttgttt gtgtcaaata
    11161 acttaaacat attttcggat tcatcttccc ttcacccagt aaggaacctg tcgggcaggc
    11221 tttcacacat tgattgcaac taccacacaa gtcgctagcc ggcgtatctg gttcgaatgg
    11281 tatattggtt atcatttcgc ctaaatagac ccacgagccg tattctggcg ttatgagcag
    11341 cgtgtttttc ccgcgccagc caatgcccgc tcgttctgct acagctacat ctgataattc
    11401 cccagtatcc accattgatt tcattcgtac atctggcaaa cgttcactta aaaaagtttc
    11461 gagtagcgct aatttttctc gtaaaacggt atgataatca attccccaag aagctctggc
    11521 aaatacacct cgtctagctc cttttttact tataggtgct tcttttaatt tagacggata
    11581 agcaagtgca atggcgataa tcgactgcgg ttccttgaaa ataagctctg gataaacccg
    11641 ttcatcaatt accggatgtt caaatcctgt aaaaaggtcc agcgcttccg cttctagtaa
    11701 tcgttctttt aaaaataaaa aagggtctgc tgttgtgaaa ccaatttttt gaatacctat
    11761 ttcatgcgca taagcaatga gttcttcttt caatgcggcg taatctgatg tcgacttcac
    11821 tatcatcatc ccctctctcc ttattttcag gcaataaaat aaacgcaatg cttcgcttaa
    11881 aaaggtcgaa acactgcgtt gataacagga tttataaaaa aata
//
LOCUS       DASDYO010000099        11887 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.099, whole genome shotgun sequence.
ACCESSION   DASDYO010000099 DASDYO010000000
VERSION     DASDYO010000099.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11887)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11887)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11887
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.099"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(84..725)
                     /locus_tag="U0290_002200"
     CDS             complement(84..725)
                     /locus_tag="U0290_002200"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464176.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302238.1"
                     /translation="MEKQTYEKLAYYTIKEKILSGKLHVGQHISEAGIAKELSISRTP
                     VRKAIAVLVSEELIEYELNRGAIVIESSMSAGRFIELLEMAEILVVQTIEKCKNKNLT
                     YKPEQGNALLEEMREIQKEEDVEAYLSLLSKWLLQFVAQLANSYAEDIVRKMKRDFFN
                     KAQKDIKMIPVLLEEETMETLEQLTYYMVEKKHDLAKEVIQKLVNLYIIRTFR"
     gene            complement(749..1699)
                     /locus_tag="U0290_002201"
     CDS             complement(749..1699)
                     /locus_tag="U0290_002201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464175.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="magnesium transporter CorA family protein"
                     /protein_id="HEM2302239.1"
                     /translation="MIEFFKTTNEKMEQISALEDGCWVKVTAPTDDEIEMLSKEMDVP
                     KPYILDALDSEERSRIELKRAEQDVRHSLVIVDYPYESEDELGYAMYETLPIGIVLTR
                     KHLVTITLRDLPILKDVQSMKLEEYDTTNHKQFLLKLLYAVSYYYLKYLNQIIKQTNN
                     LEIQIKQSMKNEQLYAFMAVQKSLVFFATALQSNKAILDKMEDVEHFMQQEDNHDLLR
                     DVIIENKQAIAMTDTYTQIISGMSDVFSSVISNNLNIVMKFLTSFTIILSLPTIVASI
                     YGMNIKLPFMHNEHAFALILLFTLLITTGVTVIFWRRKYF"
     gene            1797..2081
                     /locus_tag="U0290_002202"
     CDS             1797..2081
                     /locus_tag="U0290_002202"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464174.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302240.1"
                     /translation="MEFMSMIVTGIVLAAIISGLSFVVGKLSGLSWFWIAFCANSGFF
                     IIFITVQNSFPDNAAVALSYLNLGIGVVLIALTLFQSSNWLFKKTMQRKH"
     gene            complement(2164..3003)
                     /locus_tag="U0290_002203"
     CDS             complement(2164..3003)
                     /locus_tag="U0290_002203"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464173.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2302241.1"
                     /translation="MAEISEELRLGEVVLNVGHLKEMADFYQEVIGLKLLEENERMVR
                     LGVSGSDEALLVLKKIDNAVVPEVPRIGLFHTAFLLPTRESLADVLLHLAKSGYPIDG
                     AGDHAYSEALYLHDIEGNGIEIYADRPKAEWMHDGDGNLPMVTEQVDVDSLLQIATDE
                     PFTGMPNGTIIGHVHLQVADADKAEQFYKEVLGMNLTTAIPSARFFAAGDYHHHIGSN
                     VWAGRNLELLQENETGLAWFTIITPDKDAIITNLIEQGYDVKRLENTISVTDSNGIKI
                     HFK"
     gene            complement(3093..4484)
                     /locus_tag="U0290_002204"
     CDS             complement(3093..4484)
                     /locus_tag="U0290_002204"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464172.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM2302242.1"
                     /translation="MNSLFRRKPIEDLMHNKSGSTHLKQTLGPLDLTLLGVGAIVGTG
                     IFILPGTVAAKNAGPAIIFSFVIAAIVCAIAAMCYSEFASSVPVAGSAYTYGYVVFGE
                     LIGWLLGWALILEYGLAVASVASGWSSYLNALLSGFHISIPEAISGPFNPEVGTFINL
                     PAIIIVLVIAFLLTLGIKESTRVNTIMVVIKVGVILLFLVVGVFYVKPDNWQPFMPFG
                     ISGVMNGAALVFFAYLGFDAVSSAAEEVKDPQRTMPIGIIGSLLICTVLYVAVSAVLT
                     GMVPYTDLNVTDPVAYALQVINQDWVAGIVSLGAVVGMITVILVMSYGATRLIFAMGR
                     DGLLPKVLAEINQKYQTPVKNTWIFAVIVAIISGLVPLDRLAELVNIGTLLAFMMVSI
                     GIIFLRKNKDIQARGFKVPFYPVLPIVSFLLCAFLISRLSVHTWILCGIWFVIGLIVY
                     FAYGRKHSELLKK"
     gene            4719..6539
                     /gene="ltaP"
                     /locus_tag="U0290_002205"
     CDS             4719..6539
                     /gene="ltaP"
                     /locus_tag="U0290_002205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464171.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoteichoic acid primase LtaP"
                     /protein_id="HEM2302243.1"
                     /translation="MILFYFLLIIGKFTFAYFQIFKDPNFLALGMDLLFIVLLLGLIH
                     LFAPVRSHIYWYAGMSLFIGILMLVCVLYARFYNEVPTYHSFSLIGEVGVVKNSATSL
                     LSGTDWLYILDIVLLPFILYFHIKKGHEFPSFRITSRVYGVSFISTLLVLSGFTYFMM
                     QQNIISDSKRAKRMGIFTFNISTALTGADHVKAADITAKNVNDIKGVSVKSNPDYFGA
                     AKGKNLIIVQLESFQRNLTNVKINGQSITPTLDSLQNETMYSNQFFQTVSKSNTADAE
                     WSVYTSTFPSGYYTNTQTYGDRVIPSMPRLLGKNDYKTATFHTNDASFYNRDEFYPAV
                     GFDKFYDRKFFGDEDVIGFSPSDEVLYNKAFPILEEQYKNNQKFYAQLISVSSHMPFD
                     IPKDKQEIDLPSDLKDTELGNYFEAVHYADKQLGEFIQKLKDSGIWDDSVVVFYGDHH
                     IIKTDQLPEEQKKYVNRSTELKADPADDYRIPFFLHYPGMENPGEIKNVGGEIDIMPT
                     VMNLLGIKTGDQIMFGTDILNSSNNYVPERYTMPEGSYFTNSYMYQPDESFETGAATN
                     YDGTNKELSSDVKKRFDASRKLLQYSDSYVNNLPLRDEDK"
     gene            complement(6582..7232)
                     /locus_tag="U0290_002206"
     CDS             complement(6582..7232)
                     /locus_tag="U0290_002206"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464170.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TalA family protein"
                     /protein_id="HEM2302244.1"
                     /translation="MFLDTGNLEEIKKALQFPFFEGVTTNPTILLKENKPRNTHIANI
                     PAKVVFVQAAGLTEEEIWEDVLRIQAIEPAEGTVIGLKIPAHEAGIKVIAKVRANFPN
                     EIILATAIFSSEQGYIAALSGADYLAPYYNRMEVSGLDAAKTIEELRYVLDLQGLEDV
                     KIMGASFKNSRQIMQALASGADTVTIGYDLFLQMMNKPLALESIEKFNEHQAALPK"
     gene            complement(7372..8100)
                     /locus_tag="U0290_002207"
     CDS             complement(7372..8100)
                     /locus_tag="U0290_002207"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464169.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302245.1"
                     /translation="MKKINWTQWIALFVFASMGISVVFTIYEIFTAPIKQPATGPHVT
                     LRGDYIFLLFEIILGIFILLLPSIIARRFKFEIPGLVYILFIVFLYGSIYLGTVQKFY
                     STVPHWDKILHTFSGAMLGAIGFSFVSLLNANNKVVMKLKPGFIAVFAFCFAVTMGAF
                     WEVYEYTFDGIMNLNMQRYNLSNGTPLTGRAALEDTMTDIIVDIIGALFIVIVGYFAL
                     KKGRPWMERFEFKRKNWKKEPKKK"
     gene            complement(8195..10075)
                     /locus_tag="U0290_002208"
     CDS             complement(8195..10075)
                     /locus_tag="U0290_002208"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464168.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heavy metal translocating P-type ATPase"
                     /protein_id="HEM2302246.1"
                     /translation="MKEWMKQNWQFITTGISGILIVIGCLVGSDVGDFWTAVIFLSAF
                     VIGGFEQAKEGIQATIKTKKLNVELLMILAATGASIIGYWFEGAILIFIFSVSGALET
                     YTTNKSKREITKLMAFQPERAFRLLPNGDLEEVAAKELQLDDMVFVRPGESVPIDGVI
                     VRGSTTLNEAAINGESVPATKTVGADVFGGTVNVSSAITVKVTQTFDNTIFSKIIRLV
                     ESAQSEPSKTARFIERFEDAYVKAVLLFVLVMMFLPHFALGWSWNETFYRAMVLLTVA
                     SPCALVASVTPATLAAISNGARHGILFKGGVHLENLRGVKAVAFDKTGTLTNGTPELT
                     DRLFAENVDKQQVINVVGAMERQSLHPLAAAITQDLEAEITEKLTEIEVTDVAGWGVQ
                     AIYQEGNWKVGKAGFVGEEAAAAFSNGAFERLAGEGKTIVYVAKDGVIQAMFALKDTC
                     RPEAIRTIKALQAKGIKTIMVTGDNEQTGAAIQAELGMDYVVSGCLPEKKVDVLKELS
                     VTYGSVAMVGDGINDAPALAHAAVGIAMGEGTDIAMETADVVLMKNDLEKIPYAYNLS
                     ERLHWITWQNICFAIAVILVLITANVFQLINLPFGVVGHEGSTILVILNGLRLLRSNR
                     KK"
     gene            complement(10341..11258)
                     /locus_tag="U0290_002209"
     CDS             complement(10341..11258)
                     /locus_tag="U0290_002209"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464167.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase family oxidoreductase"
                     /protein_id="HEM2302247.1"
                     /translation="MKRITIGNSALTASEISLGCMRMADLSKEDANKVINTALENGID
                     FFDHADIYGGGKSEEVFADAIDMNATIREKMILQSKCGIRQGFFDFSKEHIIASVEGS
                     LKRLKTDYLDTLLLHRPDTLFEPEEVAAAFTELEKSGKVRHFGVSNQNPGQIELLKKY
                     VDQELIANQLQFSIMHTGMIDTGFNVNMTIDPSLDRDGGILEYSRLNNMTIQAWSPFQ
                     YGFFEGVFLDNDKFPELNKVIDKIAADKGVTNSAIAVAWIQRHPASFQTVVGTMNPGR
                     IADIAKASDVTLSREEWYEIYRAAGNQLP"
     gene            complement(11322..11855)
                     /locus_tag="U0290_002210"
     CDS             complement(11322..11855)
                     /locus_tag="U0290_002210"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3267 domain-containing protein"
                     /protein_id="HEM2302248.1"
                     /translation="MERKLIQEINLLENKKLVMNLNIVAIAIVLILTVLGIVFSGGFA
                     ITNGFMGIIWMFGGYAVAIVIHEAVHGIFFKAFRPEAKVKFGFKNGMAYAGSPGAFYT
                     KAQFFIISIAPFIVLTGLFIFLRFLGVNEAVLYLIFALHTSGCVGDFYYCILLINQPA
                     GIVVEDTDKGINFYSEG"
BASE COUNT         3719 a         2625 c         1849 g         3694 t
ORIGIN      
        1 cggcgccagt ctaaaataaa tatttcgtat actttccgca tcaaaagcac ctcctgtttt
       61 taagcaattt acctttagaa atactatcta aatgtacgga taatatacaa attcactaat
      121 ttttgtatta cctcttttgc taaatcgtgt ttcttttcta ccatgtagta agttaactgt
      181 tctaacgttt ccattgtttc ttcttccaag agcacaggaa tcattttaat atctttttgc
      241 gctttattaa agaaatctcg cttcattttc ctaacaatat cttcagcata actattagct
      301 aactgcgcaa caaattgcaa caaccatttg ctaagtaacg acagataagc ctccacatct
      361 tcttcttttt gaatttcgcg catttcctct aatagcgcat taccttgctc tggtttatag
      421 gttaaatttt tatttttaca tttttcaatc gtttgtacga caaggatttc ggccatttct
      481 aataattcaa taaaacgtcc tgcactcatg ctgctttcaa tcacaattgc cccccggttc
      541 agctcgtatt cgattaactc ttcggatact aaaaccgcaa ttgcttttct gactggcgtt
      601 cgactaatag ataattcttt tgcaatacca gcttctgaaa tatgttgacc tacatgaagc
      661 tttccactga gaattttttc tttgattgta taatatgcta atttttcata tgtttgtttt
      721 tccatgctca tccctcgttt tctatatatt aaaagtattt tctacgccaa aaaatgacag
      781 ttactcccgt tgtaattaaa agcgtaaata aaagaattaa tgcaaatgcg tgctcattat
      841 gcatgaatgg tagcttaata ttcatcccat aaatactagc cacaatcgtg ggtaatgaca
      901 aaataatggt aaatgatgtt aaaaatttca tcacgatatt taaattgttc gaaataaccg
      961 aagaaaatac atccgacatc ccgctaatta tttgggtata tgtatccgtc attgcaattg
     1021 cttgcttatt ttcaataata acatctctga gcaaatcatg attatcctct tgctgcataa
     1081 aatgttctac atcttccatt ttatcgagaa ttgctttatt cgattgaagg gccgttgcaa
     1141 aaaatactaa acttttctga actgccataa aagcatacag ttgctcattt ttcatcgatt
     1201 gtttaatctg tatttctaaa ttatttgttt gtttaatgat ttgatttaag tatttgaggt
     1261 aataataaga tacagcgtac aataatttta acaaaaattg cttatgattg gttgtatcat
     1321 attcttctaa cttcatcgat tgcacatctt ttagaattgg cagatctcgc aacgtgattg
     1381 ttacaagatg ttttctagtt aaaacaatcc caatcggaag tgtttcatac attgcgtagc
     1441 ctagttcatc ctccgattcg tatggataat ctacaatgac tagtgaatgt cttacatctt
     1501 gctctgctcg ttttaattct atcctagagc gctcctcaga atctaatgca tccaaaatat
     1561 acggtttggg cacatccatt tccttactca acatttctat ttcgtcgtct gttggagcag
     1621 ttacttttac ccaacaacca tcttccaaag cagaaatttg ctccattttt tcatttgttg
     1681 tcttaaaaaa ttcaatcatc tagatatctc ccttcttcgt atcttcttta caaaatattt
     1741 catttatgtt acattattat taataataat tcatttatga caaaggagcg atgaaaatgg
     1801 aatttatgtc tatgatagtt acaggaattg ttttagcagc aataatctca ggactttctt
     1861 ttgtggttgg taaacttagt ggattatctt ggttttggat tgcgttttgt gcaaatagcg
     1921 gtttctttat tattttcatc actgtgcaaa attcatttcc agataacgca gccgtagccc
     1981 tttcgtattt aaatcttgga attggcgtag ttttaattgc tttaacgctt ttccaatcta
     2041 gcaattggct tttcaagaaa acaatgcaac gtaaacatta aaataattag tctaatctac
     2101 cattccctta ttatcgcatc aaaaaactgt ttaagctcgt ttttcgctta aacagttctt
     2161 tttttatttg aagtgaatct taattccgtt agaatctgtc acggaaatag tattttccaa
     2221 tcgtttcaca tcatatcctt gttctattaa gttggttatt attgcatctt tatcaggagt
     2281 aataattgta aaccaagcga gtcccgtttc attttcttgc agaagttcca agttgcgacc
     2341 tgcccagacg tttgaaccga tgtgatgatg ataatcacca gccgcaaaaa accttgctga
     2401 cggaatagcg gtcgttaagt tcattccaag tacctcttta taaaattgtt ccgctttgtc
     2461 agcatctgcc acttgtaaat gcacatgacc aattatcgtt ccgtttggca tccctgtaaa
     2521 tggttcatcg gtcgcaattt gaagcaacga atccacatct acttgttctg tcaccatcgg
     2581 taaattgcca tcgccatcat gcatccattc tgcttttgga cggtctgcat aaatttcaat
     2641 gccattgcct tcaatatcat gtaaataaag cgcctcgcta taagcatgat ctcccgcgcc
     2701 atcaatcgga taacctgatt tagccaaatg cagtaacaca tccgctaaac tttctcgcgt
     2761 tggcaaaaga aaggcggtat gaaacaagcc aatccgcggc acttctggaa caaccgcatt
     2821 atctatcttt ttaagaacaa gtaaagcttc atcagaccca ctcacgccga gccgaaccat
     2881 tcgctcattt tcctctaata acttcaaacc aattacttct tgataaaaat ctgccatctc
     2941 ttttaaatgt ccaacattca atacaacttc gccaagtcgt aattcttcac taatttctgc
     3001 catgtaaaaa acgctccttt tattgtaata cattcattac aacataagga gcgttcaaat
     3061 tccaataaaa cgacttacaa aaagtaagtt aattattttt taagtaactc actatgtttt
     3121 ctaccataag caaagtaaac aattaaacca ataacaaacc aaattccgca aagaatccac
     3181 gtatgaacag acaaacggct aattaaaaac gcacataata agaacgaaac aattggaaga
     3241 actgggtaaa atggtacttt aaatcctctc gcttgaatat ctttattttt acgtaaaaag
     3301 ataatcccga tagacaccat cataaacgcc aagagtgttc caatattaac caactcagcc
     3361 aatcgatcta atggtacaag cccactaata atcgcgacta tcactgcaaa aatccaggtg
     3421 tttttaacag gtgtttgata tttttgatta atttctgcaa gtacttttgg taataaacca
     3481 tcacgtccca tcgcaaaaat cagtctagtc gccccgtaac tcattactaa aattactgta
     3541 atcatcccaa caaccgcgcc aagtgataca atgccagcta cccaatcttg gttaatcact
     3601 tgcaaagcat aagccactgg atctgttacg tttaaatctg tgtacggtac cattccagtt
     3661 aaaacagcgg atacagcaac atataacacc gtacaaataa gtagcgagcc tataatccca
     3721 atcggcattg tccgttgcgg atctttcact tcttcagctg cagacgaaac ggcatcaaaa
     3781 cctaaataag caaagaaaac tagcgccgca ccattcataa cgccactaat tccaaatggc
     3841 ataaacggtt gccaattatc cggtttgaca taaaatacac caacaactaa gaaaagtaaa
     3901 ataacaccaa ctttaataac taccataatg gtattcacgc gcgttgattc ttttatccca
     3961 agcgtcaata aaaaggcaat cacaagaaca ataataatcg ccggtaaatt aataaatgta
     4021 cctacttctg gattaaaagg cccagagatt gcttctggga tggaaatatg aaagcctgaa
     4081 agtaacgcat ttaaataaga agaccatcca ctcgcaacag aagccactgc aagcccgtat
     4141 tctaaaataa gtgcccaacc aagcaaccat ccaattaact caccaaaaac aacataacca
     4201 tacgtatagg cgctccctgc aaccggaaca cttgacgcaa actctgagta acacattgct
     4261 gcaatcgcac aaacaatcgc cgcaatcaca aaagagaaaa taatcgctgg tcccgcattt
     4321 ttcgctgcga ctgttcctgg taaaataaaa atccccgttc caacaatcgc tccgactcca
     4381 agtaaagtta aatcaagtgg tccgagcgtt tgctttaaat gcgtgctacc acttttatta
     4441 tgcattaaat cttctatcgg ttttcttcta aataatgaat tcattttgtc tcctaccttt
     4501 ttacagtctt ctaaaaggat atccttttac actttaaagg tcaataggat tgtgagaaaa
     4561 aatacaaaaa ctaatcattc tttcctaaag tagaacctat tacccaaata tatcagaatc
     4621 atctttcatg atttgcacta gacgcacgat taagctaaaa ttagaaggaa tggatttgtg
     4681 cgtgtttagc acaaagcatg ctagaaagag gaattcagtt gattttattt tattttttat
     4741 taattattgg taagttcact ttcgcctatt tccagatttt taaagatcct aacttcttgg
     4801 cacttggaat ggacctgctg tttatcgtct tacttcttgg actaattcat ttatttgcac
     4861 cggttcgctc gcacatttat tggtatgcgg gaatgtcttt atttattggg attttaatgc
     4921 tcgtgtgtgt actttacgcc cggttttata atgaagttcc aacatatcac agcttctctc
     4981 ttatcggcga ggttggcgta gttaaaaaca gtgctacaag cctgctaagc ggaacagact
     5041 ggttgtacat cctagatatc gttttactcc catttatcct ttatttccat atcaaaaaag
     5101 gacacgagtt cccttcattc cgcataacta gccgtgttta tggcgtatca tttattagta
     5161 cgctactcgt tttaagtggt tttacttatt ttatgatgca acaaaacatt atcagtgact
     5221 ccaagcgcgc aaaacgaatg ggaattttca catttaatat cagtaccgcg cttactggtg
     5281 cagatcatgt taaagccgca gatattactg caaaaaacgt gaatgacatt aaaggtgtgt
     5341 cggttaagtc aaatcccgat tacttcggtg ctgctaaagg aaaaaatctt attatcgttc
     5401 aactcgagtc attccagcgt aatttaacga acgtcaaaat taacggtcag tcgattacgc
     5461 ctacattaga tagcttacaa aacgaaacca tgtattccaa ccaatttttc caaactgtct
     5521 ctaagtcaaa tacggctgat gcagaatggt ccgtttatac atcgactttc ccaagtggat
     5581 attacacgaa cacacaaact tacggcgacc gggtaattcc gtctatgcct cgtttacttg
     5641 gcaaaaatga ttataaaaca gcgaccttcc atacaaatga tgctagtttt tacaatcgcg
     5701 atgaatttta tcctgctgta ggatttgata agttttatga tcgtaaattc tttggcgatg
     5761 aggacgttat tggcttttct cctagtgatg aagtgcttta taacaaagcc tttccgattc
     5821 tagaagagca gtacaaaaac aaccaaaaat tctatgcgca attaattagt gtaagtagtc
     5881 atatgccatt tgatattcca aaagataagc aagaaatcga cttaccgagc gatttaaaag
     5941 atacagaact tggtaactat ttcgaagcgg ttcattatgc ggataaacaa cttggtgaat
     6001 tcattcaaaa attaaaagat agcggcattt gggatgattc tgttgtcgtt ttctacggcg
     6061 atcatcacat tatcaaaacc gaccaactac ctgaggaaca aaaaaaatac gtcaatcgtt
     6121 ctactgagtt aaaagcggat ccagccgatg attaccgtat tccgttcttc ttacattatc
     6181 ctggcatgga aaaccctggt gaaattaaaa atgttggtgg cgaaattgat attatgccaa
     6241 ctgtcatgaa tttacttggt attaaaactg gtgaccaaat tatgtttgga accgatatcc
     6301 tcaattcatc aaataattac gtacctgaac gctacacaat gccagaagga agttatttca
     6361 ccaattctta catgtaccaa ccagatgaaa gtttcgaaac tggcgcagca acgaattatg
     6421 atggaacaaa caaagaactt tcgagtgatg taaagaaacg ctttgacgct agccgaaaac
     6481 tcttacagta ttctgatagc tatgtaaaca atttaccatt acgagacgaa gataaataaa
     6541 caaaagaagt atccagcaaa tctggatact tcttttttcg cttattttgg taaagcggct
     6601 tgatgttcat taaatttttc aatactttca agcgctagag gtttgttcat catttgtaaa
     6661 aacaaatcat agccaattgt aacggtatca gctccactag ctagtgcttg cataatttga
     6721 cgactatttt taaagcttgc acccataatt ttcacatctt caagtccttg taaatctaac
     6781 acgtatcgca gttcttctat tgttttcgct gcgtctagtc cgcttacttc catgcgatta
     6841 taatatggcg ctaaataatc tgccccagag agcgctgcaa tataaccttg ttccgatgag
     6901 aaaattgctg ttgctaaaat aatttcattt ggaaaattag cgcgaacttt tgcgatgact
     6961 tttatcccgg cttcgtgggc tgggattttc aagccgatta ccgtaccttc tgccggctca
     7021 attgcttgaa ttcgaaggac atcttcccag atttcctctt ccgttaaccc agccgcttgc
     7081 acaaacacaa ctttggctgg aatattcgct atatgcgtgt ttctcggctt attctccttt
     7141 aataaaatag tcggattagt ggttacacct tcaaaaaacg gaaattgaag cgctttcttt
     7201 atttcctcta aattccccgt atctaaaaac atttcctcac tccttcaaag ttttcttctc
     7261 attttaagtg tagaaaagtt ccacgagcca gtcaattgtt tctgagaccc aatgttgttg
     7321 gcgattttgt acaacaaaaa acacctccac gtgccgaggt gttttttacc gctatttttt
     7381 cttcggttct ttcttccaat ttttccgctt gaattcaaag cgttccatcc atggtcggcc
     7441 ttttttcagt gcaaaatagc cgacgatgac gataaatagt gcgccgataa tatcgacaat
     7501 aatatctgtc atcgtatctt ccagtgcggc gcggccagtg agcggtgttc cattagatag
     7561 attataacgt tgcatattta agttcataat tccatcaaaa gtatactcat acacttccca
     7621 gaaagccccc attgtcaccg cgaaacaaaa cgcgaataca gcgataaaac ccggtttaag
     7681 tttcatgaca actttgttat tagcatttag caaactaacg aacgaaaagc caattgctcc
     7741 aagcatcgcc ccactaaaag tatgtaaaat tttatcccaa tgtggcacgg ttgaatagaa
     7801 tttttgaact gtaccaagat aaatggatcc gtatagaaat acaataaaca aaatatacac
     7861 aagaccaggt atttcaaatt tgaagcgtcg tgcaataatc gaaggtagca acaaaataaa
     7921 aattcctaat ataatttcaa atagtaaaaa tatatagtcc cctcgtaacg tcacatgcgg
     7981 cccagttgct ggctgcttga tcggtgctgt aaaaatttcg taaatagtaa aaacaacaga
     8041 aatccccatt gacgcaaaaa caaataatgc tatccattgt gtccaattga tctttttcat
     8101 gcactcatct ccaatctatc atgtaatacc cttttttcgc aaaaagaaac tgctcatcca
     8161 tcttagacta ggaatagaca agcagtcaaa tttatcactt tttccgatta gatcgaagga
     8221 gcctaagccc atttagaata actaaaatag tacttccctc gtgccccaca acgccaaatg
     8281 gcaaattgat tagttggaaa acattcgctg ttatcaaaac aagaatcacc gcaatcgcaa
     8341 aacaaatatt ttgccaagta atccagtgaa gccgttcaga aaggttgtaa gcatatggga
     8401 ttttctccaa atcatttttc attaaaacaa catctgctgt ttccatcgca atgtccgtcc
     8461 cctcgcccat tgcaattcca acagccgcat gtgcaagagc cggagcatca ttaattccat
     8521 caccaaccat tgccacactg ccataagtaa ccgacaattc ttttaacaca tccacttttt
     8581 tctcaggtaa acaaccggaa acaacatagt ccattccgag ttcggcttga atcgctgcac
     8641 ctgtttgttc gttatctccc gtcaccatta tggttttaat cccttttgct tgaagtgcct
     8701 taatcgtacg aatggcttca ggccggcatg tatctttaag ggcaaacata gcctgaatca
     8761 cgccgtcttt agctacataa acaatcgttt tcccttcacc cgcaagtcgc tcaaatgcac
     8821 catttgaaaa tgctgccgct gcttcttccc caacaaaccc agctttccca actttccaat
     8881 ttccctcttg ataaatcgct tgaactcccc atccagctac atccgtcact tcaatttctg
     8941 ttaacttttc ggtgatttct gcctctaggt cttgcgttat tgccgcagct aacggatgta
     9001 aagattgtcg ctccatcgct ccaactacat tgattacttg ttgcttatcg acattttcag
     9061 caaataaccg atctgtcagt tctggtgtac catttgtcag cgtcccagtt ttatcaaatg
     9121 caacagcttt tacaccgcgc aaattttcca agtgtacgcc gcctttaaac aaaatcccgt
     9181 gacgtgcacc gttcgaaatt gccgctaaag tcgcaggcgt taccgaagcc actagcgcac
     9241 aaggggaagc aaccgttagc aaaaccatcg cacgataaaa tgtttcattc caagaccacc
     9301 ctaaagcaaa atgaggcaag aacatcatta ctaacacaaa taatagaact gcttttacat
     9361 acgcatcctc aaatcgttca ataaagcgag cggttttcga aggttcactt tgagccgatt
     9421 ctactaaacg aataatctta ctaaaaatcg tattatcaaa tgtttgcgtt actttgaccg
     9481 tgatggcgct gcttacattg accgtcccgc caaacacatc cgcaccaact gttttcgtcg
     9541 ctggcactga ttccccatta atggctgctt catttaacgt ggttgaccct cgaacaatga
     9601 ctccatcgat tggaacactt tctcctggcc gaacgaatac catatcatcc agttgtaact
     9661 cctttgcagc cacttcctct aaatctccat taggaagcaa acgaaaggcg cgttctggtt
     9721 gaaatgccat taatttcgtg atttcgcgct tacttttatt ggtcgtatac gtttctaaag
     9781 cgccactaac cgagaaaata aaaataagta tggccccttc aaaccaataa ccaataatag
     9841 atgcaccggt agccgctaaa atcattaaga gctccacatt caactttttc gttttgatag
     9901 tcgcttgaat gccttcttta gcttgctcaa aaccaccgat aacaaaggca cttaggaaaa
     9961 taaccgctgt ccaaaagtcg ccaacatcac tgccgaccaa acaacctatc acaatcaaaa
    10021 tcccgctaat acccgtcgta ataaattgcc aattctgctt catccattcc ttcattatgc
    10081 tcatcctctc caaatgataa tgattcccat taccctaaaa aacacaaaaa tctgctttcg
    10141 caaccgcgaa aaacagatta aacaataatt attataaata aatataaaaa tatgcgtcct
    10201 taactcactt gttattatag cactttccta atgacatatc aaactaattg ataaaattgc
    10261 attctaattg agaatgaatt tcactatcac tccaatacat aaaaaaacac ttgagcataa
    10321 tgcccaagtg tctgatctca ttaaggtaat tggttgccag ccgcacggta aatttcatac
    10381 cattcttcgc gactaagtgt tacgtcagaa gcttttgcaa tatcagcaat tcttcccgga
    10441 ttcattgtac caaccactgt ttggaagctc gctgggtggc gctgaatcca cgcaaccgct
    10501 atagctgagt tagttacacc tttgtcagca gcaattttgt cgattacttt gttcaattca
    10561 gggaatttat cgttatccaa gaaaactcct tcaaagaaac catattggaa cggggaccat
    10621 gcttggattg tcatgttgtt taagcgacta tattccaaaa taccgccgtc acgatcaagt
    10681 gaaggatcaa tcgtcatatt cacattaaaa ccagtatcaa tcatacccgt atgcataatg
    10741 ctaaattgca gttggttggc gattaattct tggtctacat attttttcag tagttcaatt
    10801 tgacctggat tttgattact tacgccgaaa tgacgcactt ttccactttt ctctaattct
    10861 gtgaaagctg ccgctacttc ttctggttcg aaaagtgtat ccggacggtg aagtaaaagt
    10921 gtatctaaat agtctgtttt caggcgtttt aagctacctt ccacagaagc aataatgtgc
    10981 tcttttgaaa aatcaaagaa tccttgacga attccgcatt ttgattgaag aatcattttt
    11041 tcacgaatag ttgcattcat atcaattgca tcagcaaaaa cttcctctga tttaccgccg
    11101 ccataaatat ccgcgtggtc aaaaaaatca atgccatttt caagtgctgt attaatcact
    11161 ttattggcat cctctttact aagatccgcc attctcatac atcctagcga aatttctgaa
    11221 gctgttaaag cgctattacc aattgttata cgtttcaaac taagcacctc tttctaaaag
    11281 tatatcctta ttctaacact ttgttgtaat cgttaccaag cttaaccttc tgaataaaaa
    11341 ttaatgcctt tatccgtatc ctccacaacg attccagccg gttgattaat caagagaatg
    11401 cagtagtaaa aatccccaac acaaccagac gtatgtaacg caaaaattaa ataaagaacc
    11461 gcttcattca ccccaagaaa tcgcagaaaa atgaacaaac ccgtaagaac gataaatggc
    11521 gcaatcgaaa taataaagaa ttgtgctttc gtataaaatg ctccggggct tccagcataa
    11581 gccatcccat ttttaaaacc aaatttcact tttgcttctg gacgaaatgc tttaaagaaa
    11641 atcccgtgta cggcttcgtg aataacaatt gctactgcat aaccaccaaa catccaaata
    11701 atccccataa aaccattcgt aattgcaaaa ccacctgaaa aaacaattcc taaaacagtt
    11761 aatatgagta caatagcaat cgcaacaata ttcaaattca taaccaattt tttattttct
    11821 agtaaattaa tttcctgaat caattttctt tccatccaga ccgctccttt tataaaaacg
    11881 ctgatat
//
LOCUS       DASDYO010000100        11780 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.100, whole genome shotgun sequence.
ACCESSION   DASDYO010000100 DASDYO010000000
VERSION     DASDYO010000100.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11780
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.100"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(58..387)
                     /gene="yneA"
                     /locus_tag="U0290_002211"
     CDS             complement(58..387)
                     /gene="yneA"
                     /locus_tag="U0290_002211"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell division suppressor protein YneA"
                     /protein_id="HEM2302249.1"
                     /translation="MTMKLIWDKFYVSIIFVLTCIILGIILMCTVVGGGNDYSEVNVS
                     EGDSLWALADQYAGKSDMAKADFVSWVEKENNLADGHVEAGDSVVIPVHKTKLIKSDS
                     TIQLANQ"
     gene            544..1158
                     /gene="lexA"
                     /locus_tag="U0290_002212"
     CDS             544..1158
                     /gene="lexA"
                     /locus_tag="U0290_002212"
                     /EC_number="3.4.21.88"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional repressor LexA"
                     /protein_id="HEM2302250.1"
                     /translation="MKISKRQQDIYEFIKSEVKEKGYPPSVREIGEAVGLASSSTVHG
                     HLARLEGKGLIRRDPTKPRAIEILSLEDEAETPNVVNIPIIGKVTAGMPITAIENIDE
                     YFPLPEYMAAGETNVFMLEIDGESMINAGILDGDKVIVRQQSSAINGEIVVAMTDENE
                     ATCKRFYKEANHFRLQPENDALEPILLNNVTILGKVIGLYRDIR"
     gene            1189..1713
                     /locus_tag="U0290_002213"
     CDS             1189..1713
                     /locus_tag="U0290_002213"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302251.1"
                     /translation="MIYFETERLIARDYLASDYLPFSQMNADEQVMKYFPARLTQNES
                     NAFLDRIQEELKSLGYGLFAIEVKSTGEFIGFTGFHEATFEATFTPCTEIGWRLKHSA
                     WNQGYATEAALGALAFAEEINTINEIYSFTAALNKPSENVMKKIHLTKIATFEHPALV
                     NGDPLKPHVLYKKA"
     gene            complement(1747..3042)
                     /locus_tag="U0290_002214"
     CDS             complement(1747..3042)
                     /locus_tag="U0290_002214"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464825.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="arsenic transporter"
                     /protein_id="HEM2302252.1"
                     /translation="MQITLAILVFAFTLFFVIWQPRKLSIGWSACGGALIAILLGVVT
                     LSDVATVTGIVWNATLAFIAIIIISLILDKIGFFEWAALHMARLARGNGLLMFILISI
                     LGAFVAALFANDGAALILTPIVLAMVRALNFDEKKVFPFIIASGFIADTTSLPLVVSN
                     LVNIVSADFFGISFSQYALIMWIPTLFSLVASILILYFYFRKALPKKYDMRVIREPAS
                     AIKDKKMFRVSWGILIILVAGYFLSSFLDIPVSFIALLVAVIFLLVSAKSHAVSTKAI
                     LKGAPWNIVFFSVGMYVVVYGLQNVGITKLLSEAITYVAHFGLFAGTVGMGFIAAILS
                     SVMNNLPTVMINALAIDHTSFTGVMKEALVYANVIGSDLGPKITPIGSLATLLWLHVL
                     AQKGIKISWGSYFKIGIVITIPVLFITLVGLYFSLLIWN"
     gene            complement(3186..4520)
                     /gene="glnA"
                     /locus_tag="U0290_002215"
     CDS             complement(3186..4520)
                     /gene="glnA"
                     /locus_tag="U0290_002215"
                     /EC_number="6.3.1.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464824.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I glutamate--ammonia ligase"
                     /protein_id="HEM2302253.1"
                     /translation="MAKYTKEDIFRFADEQNVKFIRLQFTDILGIIKNVEIPVSQLKK
                     ALDNKIMFDGSSIEGFVRIEESDMYLFPDLDTWVVFPWTAEKGKVARMICDIYNPDMT
                     PFAGDPRANLKRVLKEMEELGFTEFNLGPEPEFFLFKLDENRRPTLELNDSGGYFDLA
                     PTDLGENCRRDIVLELEEMGFEIEASHHEVAPGQHEIDFKYEDAVTACDSIQTFKLVV
                     KTIARKHGLHATFMPKPLFGVNGSGMHFNMSLFNEKGNAFFDESGELELSQTAYHFLA
                     GMLKHARGYTAVTNPTINSFKRLVPGYEAPCYIAWSGKNRSPLVRVPSSRGLSTRLEL
                     RSVDPSANPYLAMAVLLKAGLSGIKDELTPPAPVDRNIYGMNEEEREATGIYDLPESL
                     GHALIELEKDDIIKAGLGEHIFEHFIEAKTIECDMFRTAVHPWEREQYLEIY"
     gene            complement(4591..4959)
                     /locus_tag="U0290_002216"
     CDS             complement(4591..4959)
                     /locus_tag="U0290_002216"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464823.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2302254.1"
                     /translation="MSEKEIRRSMPLFPIGPVMKLTDLTARQIRYYEDQGLIHPARNQ
                     GNHRLYSLQDIDVLLEIKDYLNDGLNIAGIKKMYQMQQKESKEPLTDDDVRKILRKEM
                     QQAGRFVKQDATGKQQLPRF"
     gene            complement(5161..6387)
                     /locus_tag="U0290_002217"
     CDS             complement(5161..6387)
                     /locus_tag="U0290_002217"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464822.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methionine gamma-lyase family protein"
                     /protein_id="HEM2302255.1"
                     /translation="MNNIQAIRKKVETQIDDLQNKTDEIAEFNQAKVLDAFQENKVSD
                     FHFHPSTGYGYDDEGRDTLERVYATVFKTEAALVRPQIISGTHAISTVLFGILRPDDE
                     LLYITGQPYDTLEEIVGIRKQGQGSLKDFHIGYSSVPLLENGDVDFPRIAKKMTPKTK
                     MIGIQRSRGYADRPSFTIEKIKEMIVFVKNINPEVIVFVDNCYGEFVEYQEPPEVGAD
                     IIAGSLIKNPGGGLAKTGGYIAGKEALVDLCGYRLTTPGIGREAGASLYSLLEMYQGF
                     FLAPHVTAQAIKGARFTAAMLAEFGVEADPVWDAPRTDLIQSVSFHNKEKMVAFAQAI
                     QAASPVNAHVLPIGAYMPGYEDDVIMAAGTFIQGASLELTADGPIREPYQLYVQGGLT
                     YEHIKIAVTRAIQKIV"
     gene            complement(6380..7603)
                     /gene="hflX"
                     /locus_tag="U0290_002218"
     CDS             complement(6380..7603)
                     /gene="hflX"
                     /locus_tag="U0290_002218"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464821.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEM2302256.1"
                     /translation="MEREKIILVGVILPNKTEEAFWNSMNELHSLAKTANGEVVDELI
                     QKLERVNQASFIGSGKLEELATLVEMHEADVVIFNSELSATQVRNISKAVDARIIDRT
                     QLILDIFAMRAKSKEGKLQVAYAQYKYLLPRLSGQGVSLSKLGGGIGSRGPGESKLEM
                     DKRHIREKMHDIKAQLTHVEQHRKRIIERRNIQSVFRFGLIGYTNAGKSTIFNRLTNE
                     TTLQEDKLFATLDPTTRKIRFSGGFQALLTDTVGFIQDLPTTLIAAFRSTLEETANVD
                     VLIHVVDASNPDYLQHETTVISLLEELEMNHLPTLVIYNKMDHAPATFVPDQPENLLI
                     SALDQEAPDTIKQRMIQLIEKNWAFFTLELSEEKGKELAQIKQQAWVTKLEYIESKQS
                     YHIEGYKPRKELNNE"
     gene            complement(7714..7947)
                     /gene="hfq"
                     /locus_tag="U0290_002219"
     CDS             complement(7714..7947)
                     /gene="hfq"
                     /locus_tag="U0290_002219"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464820.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA chaperone Hfq"
                     /protein_id="HEM2302257.1"
                     /translation="MKQGGQGLQDYYLNQLRKEKILATVFLTNGFQLRGRVVSFDNFT
                     VLLDVEGKQQLVFKHAISTFSPQKNVALNPDAE"
     gene            complement(8069..8986)
                     /gene="miaA"
                     /locus_tag="U0290_002220"
     CDS             complement(8069..8986)
                     /gene="miaA"
                     /locus_tag="U0290_002220"
                     /EC_number="2.5.1.75"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464819.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (adenosine(37)-N6)-dimethylallyltransferase
                     MiaA"
                     /protein_id="HEM2302258.1"
                     /translation="MSKIPVIVIVGPTAVGKTSLSIELAKKLDGEIISGDSMQVYRGL
                     DIGTAKITPEEMDGIKHYLIDVTNPSEPFTAAKFQIETRKCIETIHQAGRLPIIVGGT
                     GLYIQSVFYDYDFGNVSEDKAYRAELEQLDKTVLWQMLEQKDPESAAQIHENNKRRVI
                     RALEVMHLTGKPFSEYQVNNVLNDRYQPLFLGLDLDRALLYERINQRVNLMFEEGLVT
                     EAKKLYEQHLVDVPAVRGIGYKELFPYFEGKSSLEEAKELIQKNSRHFAKRQLTWFRN
                     RMDIDWIQAGVSSTESEALNKATTFLTAK"
     gene            complement(9113..10789)
                     /locus_tag="U0290_002221"
     CDS             complement(9113..10789)
                     /locus_tag="U0290_002221"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464818.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate dehydrogenase/oxidase"
                     /protein_id="HEM2302259.1"
                     /translation="MVQLFSAFDRETIERNLQEEKFDLVIVGGGITGAGIALDATSRG
                     MSVALVEMGDFASGTSSRSTKLVHGGLRYLQQFEIKEVADLGKERAIVYENGPHVTTP
                     EWMMLPFHKGGNMGKTTASFGIRLYDYLAGVKKNERRKILSAKETLAKNPFVKKDGLK
                     GSGYYVEYRTDDARLTIEVMKKAVELGANAINYTKAEHFLYDDNKQVVGVTVTDRLSG
                     KAYDIKGHRVINAAGPWVDKVRKLDYATNNKHLRLTKGIHLVIDKQKFPMEQAVYFDT
                     PDGRMVFAIPRDKKVYVGTTDTVYDEAVINPKALESDHNYVIKAINYMFPDVHITEKD
                     IESSWAGVRPLIYEEGKDPSEISRKDEVWFSESGLITMAGGKLTGYRKMAEKLLDDVS
                     KTLAKETGKKYKTVQTKHLPISGGDIGGSEQLEAFLSKKAKEGNNRFGWTLEEGREMA
                     KRFGSNIDQLFTYAQEHKEQNETTLPNSLYAELRYSIQHEAVTTPIDFLLRRTGYLLF
                     DMPYLLEWKDAVVDEMAKQFHWSDDVKQTYIEELNIQINDAREPADWHDR"
     gene            complement(11022..11720)
                     /locus_tag="U0290_002222"
     CDS             complement(11022..11720)
                     /locus_tag="U0290_002222"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464817.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerophosphodiester phosphodiesterase"
                     /protein_id="HEM2302260.1"
                     /translation="MTEIFAHRGSSGTHPENTLPAMKAAILSGADGIELDIHVLKSGE
                     LIVMHDERVDRTTNGSGFLKDYTLSEVKKLVIGKRLFRKIRVPTLEEIFKLVSGTDMI
                     LNIELKTDVFEYEGIEQKVLALADKFPEVKRMYSSFNPDTLIRLRDLDPTARLALITH
                     ENLDEVLPLHEKIQLDAVHPPVKAMKNPILKQIAARYWTVNKEETITHFIDANVKGMM
                     TDFPEKAVALRNNK"
BASE COUNT         3505 a         2456 c         1929 g         3890 t
ORIGIN      
        1 aaagcagcat gatcgctact ttctaatatt atatcataaa cggccactaa atcgacctta
       61 ctggtttgct agttgaatcg tactatcact ctttattaat tttgttttgt gtacaggaat
      121 aactactgaa tctcctgctt ccacatgacc gtcagctaaa ttattttctt tttctaccca
      181 gctaacaaaa tctgcttttg ccatatcact tttccctgca tattgatctg ctaatgccca
      241 taaagaatcc ccttcactta cgttcacttc tgaatagtcg tttcccccgc caactacagt
      301 acacattaaa atgattccta gtatgatgca agtaagtaca aatataatag aaacataaaa
      361 tttatcccaa attaatttca tagtcattaa taatccctcc aaaaagaatg tatgttcgct
      421 tttctatatt atagaacagc cgttcgtata tgtcaataaa aaaacgaacc tttgtttgca
      481 tattggtttt tcttttgcta tacttgaatt ataaaataac cattaaatca atgaggtgaa
      541 accatgaaaa tatctaaacg ccaacaagat atatatgaat ttataaaatc agaagtaaaa
      601 gaaaaaggtt atccaccttc cgtccgcgaa attggtgaag cagttggcct tgcttccagc
      661 tctactgttc atggacatct tgctcgcctt gaaggtaaag gcttaattag acgggaccca
      721 acaaagcctc gtgcgattga aatattatct ttagaagacg aagcagagac acccaatgtt
      781 gtaaatattc ctattatcgg gaaagtaact gctggaatgc ccatcactgc aattgagaac
      841 attgatgaat atttcccact accagaatac atggcagctg gcgaaaccaa tgtcttcatg
      901 ttagaaatcg acggcgaaag tatgattaat gccggaatcc ttgatggtga caaagtaatc
      961 gttagacaac aaagttctgc aatcaatggc gaaatcgttg tagcgatgac agatgaaaat
     1021 gaagctacat gtaaacgatt ctacaaagaa gctaatcatt ttagattaca acccgaaaac
     1081 gatgctttgg aacctatcct tttaaacaac gtaacgattc taggaaaagt aatcggactt
     1141 tatcgagata ttcgctaatt ttattcgttt gaacaggtgg ttgagaacat gatttatttt
     1201 gaaactgaac ggcttattgc aagagattat ttagcaagcg attatcttcc ttttagtcaa
     1261 atgaatgcag atgagcaagt aatgaaatac ttcccagcca gattaactca aaacgaaagt
     1321 aatgcatttc ttgataggat tcaagaagaa ttaaagtcac ttggatatgg tctctttgct
     1381 attgaagtta aatcgactgg cgaattcatc ggttttactg gatttcatga ggctactttt
     1441 gaagctacat tcactccatg cacggagata ggttggcgat taaaacatag cgcttggaac
     1501 caaggctatg ccaccgaagc cgcacttggc gcgttagcat ttgctgaaga aatcaacact
     1561 attaacgaaa tatacagttt taccgccgca ctcaataaac cttcagaaaa tgtcatgaaa
     1621 aaaatccatt taacaaaaat agctactttt gaacatcccg ctttagtaaa tggcgatcca
     1681 ctaaagcccc atgttcttta taagaaggca taataaaacc ccctgtacat tctggtacag
     1741 ggggttttaa ttccaaataa gcagtgaaaa atatagtccg acgagcgtta tgaataaaac
     1801 tggaatagta atcacaatgc caattttgaa ataagagccc cagcttatct ttatcccttt
     1861 ctgcgctaga acatgtagcc aaagtaaagt tgctagcgag ccaattggtg ttattttcgg
     1921 acctaaatca gaaccaatga catttgcata gactaacgct tctttcatca cgcctgtaaa
     1981 tgacgtatga tcgattgcaa gtgcatttat cattactgtt ggcaaattat tcatgacaga
     2041 agacagtatt gcagcaataa atcccattcc aactgttccc gcaaataaac caaagtgcgc
     2101 aacatatgta attgcttctg ataataattt tgtgataccg acattttgca aaccatatac
     2161 aactacatac ataccaaccg agaaaaacac aatattccaa ggtgctcctt ttaaaatagc
     2221 ttttgtcgag accgcatgac tttttgcact gactaacaaa aagataacag caactagcaa
     2281 ggcaataaat gacactggaa tatctaaaaa actactcaaa aaatagcctg ctacaaggat
     2341 gataagtatt ccccaagaaa cacgaaacat ctttttatct ttaattgcag aagctggctc
     2401 tcgaatcact cgcatatcat attttttagg taatgctttc cgaaaataaa aatataagat
     2461 taaaatactc gcaactaaag agaaaagcgt tggaatccac ataataagcg catactgcga
     2521 aaaactaata ccgaaaaaat cagccgaaac tatattgact aaattactaa ctacgagcgg
     2581 caaggacgtc gtatctgcta taaaaccgct agcaataata aatggaaata cctttttctc
     2641 atcaaaattc agcgctcgca ccatcgctag aacaattggt gtcaaaatta gcgccgcccc
     2701 gtcattagca aacaacgcag caacgaaagc tcccaaaata gaaataagaa taaacattaa
     2761 taacccatta cctcttgcta atcgcgccat atgtaaagcc gcccactcaa aaaagccaat
     2821 tttatctaaa atcaatgaaa taattataat agcaataaaa gcgagcgtcg cattccaaac
     2881 aattccagta actgttgcga catctgataa agtgacgacg ccaagtaata tggcaattag
     2941 cgcacctccg caagctgacc atccgattga taattttctt ggttgccaaa tcacaaaaaa
     3001 taatgtgaag gcaaatacta aaatagctaa agtaatctgc atttcttccc ctttctctaa
     3061 tgaaaacctc cctttcacta gcacattttt aaatatatgc ctctatttgc caaacatcaa
     3121 acatttgaaa ccgattttcc aataaaaaag cacgtttcca tctataggaa acgtgctttt
     3181 gactattaat aaatttcaag atattgttcg cgttcccaag ggtgaactgc tgtgcggaac
     3241 atatcacact caattgtttt tgcttcaata aagtgttcga aaatgtgctc acctaaacca
     3301 gctttgataa tatcgtcttt ttcaagttcg attaaggcgt ggcccaagct ttctggtaga
     3361 tcataaatgc cagttgcttc acgttcttct tcgttcatgc cgtaaatgtt acgatcaact
     3421 ggtgccggag gagttaattc atctttaatt ccagataaac cagctttaag tagtaccgcc
     3481 attgctaaat atggattagc agatggatcg acgctacgta attcaagacg agtgcttagt
     3541 ccacgagaac ttggaacacg aacaagcggg ctacggtttt tacctgacca cgcaatgtaa
     3601 catggtgctt catatcctgg aaccaatcgt ttgaatgagt taatggttgg atttgtaaca
     3661 gctgtatagc cacgggcatg ttttaacatc cctgctaaga aatgataagc tgtttggctc
     3721 aattctagtt ctccgctttc atcgaagaaa gcatttcctt tttcattaaa tagtgacata
     3781 ttgaaatgca ttccagaacc atttacacca aagagcggct tcggcatgaa tgttgcgtgt
     3841 aaaccatgtt tacgagcaat tgtttttacg actaatttaa atgtttggat gctatcacac
     3901 gctgtaacgg cgtcttcata tttaaagtca atttcgtgtt gtcctggtgc cacttcatgg
     3961 tgagacgctt cgatttcaaa gcccatttct tctaattcaa gcacaatatc gcgacgacag
     4021 ttttcaccta agtcggttgg tgctaaatcg aagtaaccac cactatcatt tagttcaagt
     4081 gtcggacgac gattttcatc taatttgaat aggaaaaatt ctggctcagg tcctaagttg
     4141 aactctgtga aacctagttc ttccatttct ttaagtacac gttttaagtt agcacgtggg
     4201 tctccagcaa aaggagtcat gtcaggatta taaatatcac aaatcattct tgcaactttt
     4261 cctttttcag ctgtccaagg gaacacaacc caagtgtcta agtctgggaa taaatacata
     4321 tcagactctt caattcgtac aaagccttca atggaggaac catcaaacat gattttgtta
     4381 tctagtgctt tctttagttg gctaacagga atttccacat tcttaattat cccgagaata
     4441 tccgtgaact gtaaacgaat aaattttaca ttttgttcat ctgcgaagcg gaaaatgtct
     4501 tcttttgtat attttgccat aatctaaatt cctcctaaat aatctaatta tattaacttc
     4561 taaataaagt aaatacctct tcttgtcttt ttaaaacctt ggtaattgtt gtttccctgt
     4621 cgcatcttgc tttacaaagc gaccagcttg ttgcatttct tttctaagta ttttgcgcac
     4681 atcatcgtct gtcaaaggtt ctttagattc tttttgctgc atttgataca ttttcttaat
     4741 tcccgcaata ttcagaccat cattcaaata atcttttatc tctagcaaaa catcaatgtc
     4801 ttgaagtgaa tacaaacggt gatttccttg atttcgtgcc ggatggatta atccttggtc
     4861 ttcatagtag cgaatttgtc tagcggtgag atcagttagc ttcatcacag gcccaattgg
     4921 aaacagcggc atcgatctcc ggatttcctt ttcactcacg acaattcccc ctcaaaacat
     4981 aattattttt tgatgatagt agcattataa tgtacgtcag atgttttgtc aaatttatgt
     5041 aagatattct aacattatcg ttaaagcgtt gtataccaat gtattccgca taaaaaaacc
     5101 gcgattaaaa ccatcgcggt aaaaattaaa aatatttttt tgcaaataaa tgttactttt
     5161 ttatactatt ttttggattg ctcgagtaac tgcaattttg atgtgttcat aggtcaaacc
     5221 gccttgaaca tagagttgat aaggttctct aataggtcca tctgctgtta gttccaaact
     5281 cgcgccttgt ataaatgtcc cagctgccat tatcacgtca tcttcataac ctggcatata
     5341 tgcaccgatt ggcaaaacat gcgcattaac cggcgaggct gcttgaatag cttgcgcaaa
     5401 tgcaaccatc ttctctttgt tatggaagga aacgctttga attaaatcag ttcttggcgc
     5461 atcccaaact gggtcagctt ctacaccaaa ctccgcaagc atggcggctg tgaatcgtgc
     5521 tcctttaatt gcctgagctg tcacatgagg agctaaaaag aaaccttgat acatttctaa
     5581 taaactatag agtgatgcac ctgcttctct gccaattcca ggtgtagtta agcgataacc
     5641 acataaatct actaatgctt cttttcctgc aatataaccg cctgttttcg ctaagccacc
     5701 accaggattt ttgattaatg aacccgcgat aatatctgct ccaacttctg gcggctcctg
     5761 atattccacg aattctccgt aacagttatc tacaaaaaca attacttccg gattgatatt
     5821 ttttacaaat acaatcattt ctttaatctt ttctattgta aaagaaggtc tatccgcata
     5881 acctcgtgaa cgctgaattc caatcatctt tgtttttggc gtcatttttt tcgctattct
     5941 tggaaagtct acatcaccat tttccagaag cggcacagag ctataaccaa tatgaaaatc
     6001 ttttaaagag ccctgtcctt gctttcgtat tcctacaatt tcttctaacg tatcataggg
     6061 ttgaccagta atataaagta attcatcatc cgggcgaagg atgccaaata atacggttga
     6121 aattgcatgg gttcctgaaa ttatttgtgg acgaaccagg gccgcctctg tcttaaatac
     6181 agtcgcatac acacgttcta atgtatctct accttcatca tcataaccat acccagtgga
     6241 aggatgaaaa tgaaaatcac tcactttatt ctcttgaaac gcatctaaaa ctttcgcttg
     6301 attaaattca gcaatttcgt ctgttttatt ttgcaaatca tcaatttgtg tttccacctt
     6361 ttttcgtatc gcttgaatat tattcattat ttagctcctt tctcggtttg tacccctcta
     6421 tgtggtaact ctgtttactt tcaatatatt ctagtttcgt tacccacgct tgttgcttta
     6481 tttgcgctaa ttcttttcct ttttcttctg aaagttctag tgtaaagaaa gcccaatttt
     6541 tttcaattaa ttggatcatt cgctgtttaa tcgtatctgg agcctcttga tctaaagctg
     6601 atataagcaa attttctggt tgatcgggta caaacgtggc tggtgcatga tccattttat
     6661 tgtaaatgac tagtgtcggc agatggttca tttcaagttc ctctaataaa gaaattaccg
     6721 ttgtttcgtg ttgcaaatag tctggatttg atgcatcaac tacatgaatt aacacatcta
     6781 cattggcagt ttcctctaaa gtagagcgaa aagctgcaat taaagtcgtt ggcaaatctt
     6841 gaataaaacc aactgtatct gtcaaaagcg cttgaaatcc acccgaaaag cgaatttttc
     6901 gtgtggttgg gtcaagtgtt gcaaataatt tatcttcttg taatgttgtt tcattcgtta
     6961 gacggttgaa aatagttgat ttccctgcat ttgtgtaacc aattaaacca aaccgaaaaa
     7021 cggattgtat atttcttcgt tcaatgattc gcttgcggtg ttgttcaaca tgtgttaatt
     7081 gcgctttgat atcatgcatt ttttcgcgaa tatggcgttt gtccatttct agtttggatt
     7141 caccaggccc tcttgaacca atacctcctc caagttttga taaggaaaca ccttgtccgc
     7201 taagtcttgg taacagatat ttatattgcg cgtatgcgac ttgcagtttt ccttctttgg
     7261 attttgcgcg catggcaaat atgtctaaga ttaactgtgt tcggtcaatt attcgcgcat
     7321 caaccgcctt agaaatattg cgcacttgag ttgcactaag ttcactatta aatataacaa
     7381 cgtccgcctc atgcatttcc actaaagtag caagctcttc cagtttaccg gaaccaatga
     7441 acgatgcttg atttactcgt tctaattttt gaattaattc atctactact tcaccgtttg
     7501 ccgttttagc taagctatgt agttcattca tggaattcca gaaagcttct tctgttttat
     7561 ttggcaaaat cacgcctaca agtattattt tttctctttc cacatgcatt tctccctttt
     7621 tcagacaaga ctaatcgtag catattttct gcataaaaaa aagacatgaa acatcgcaaa
     7681 aaaagcgagt tccctgcctt tcaagtaaag tacttattcc gcatcaggat ttaaagcgac
     7741 attcttctgc ggggagaaag ttgaaattgc gtgtttaaat acaagctgtt gttttccttc
     7801 gacatctagt agtacggtaa aattgtcaaa acttacaaca cgtcctctta actgaaaacc
     7861 atttgttaaa aatacagttg caagaatttt ttccttacgc aattgattta agtaatagtc
     7921 ctgtaaccct tgtccacctt gtttcataat ttccctctcc aatctctatc ttatactaaa
     7981 aatttcccaa accccaatga agttccattg tgcaattggt tggctaattt caaataccct
     8041 ttatttcttc ttaccaaaca gaaaagcgtt atttagctgt taaaaaggtt gttgctttat
     8101 ttaatgcttc tgattctgta ctgctaacac ccgcctgaat ccagtcaata tccattctat
     8161 ttctaaacca ggttaactgt cttttcgcga aatgccttga gttcttttga attaattctt
     8221 ttgcttcttc tagtgagctc tttccttcaa aataaggaaa taattctttg tagccgatgc
     8281 cgcgaactgc tggaacatcc actaaatgtt gctcatataa tttttttgct tctgtcacta
     8341 aaccttcttc aaacattaaa ttcactcgct gattaattct ttcgtaaagt aacgctctgt
     8401 ccaaatcaag tcctagaaag agtggttggt atctatcatt aagtacatta ttcacttgat
     8461 actctgagaa aggctttcct gttagatgca tcacttctaa tgctctaatc actcggcgct
     8521 tattgttttc gtgtatctgt gctgcgcttt ctggatcttt ttgttcgagc atttgccaca
     8581 atacagtttt gtctagttgt tctaattccg ctcgataagc cttatcttcg cttacgttac
     8641 caaaatcata atcatagaaa acagattgaa tataaagtcc tgttccacca acaataattg
     8701 gtagcctacc agcttgatgt attgtttcta tacattttct tgtttctatt tggaatttcg
     8761 ctgcagtgaa tggttcggaa ggattcgtca catcaataag ataatgtttg attccatcca
     8821 tttcttctgg tgtgattttt gctgtaccga tatctaatcc acgataaact tgcatagagt
     8881 caccactgat gatttctccg tccaattttt tcgctagttc aatacttaaa cttgtctttc
     8941 cgacagcggt tgggccaacg atgacgatga caggaatctt gctcaaaaaa aaacctcctt
     9001 ttcacctgta atcaatgtac catgaaaaag gtttcttgaa aatagtgaaa atgatttttt
     9061 ccagaaaaaa agcgcaaatc cttgaaagat ttacgctctt ttcgaatttt aattatctat
     9121 cgtgccaatc agctggttct ctagcatcat taatttgaat atttaattcc tcgatatagg
     9181 tttgttttac atcgtcgctc cagtggaatt gtttagccat ttcatccaca acagcgtctt
     9241 tccattcaag taagtatggc atatcgaaaa gcaagtagcc agtgcgacgt aataagaaat
     9301 cgattggcgt tgtcactgct tcgtgttgaa tcgagtagcg tagttcagca tacaaactgt
     9361 ttggtaaagt ggtttcgttt tgttctttat gttcctgtgc ataagtaaat aattgatcga
     9421 tattactacc gaaacgttta gccatctcac gaccttcttc taaagtccag ccgaaacgat
     9481 tattaccttc tttcgctttt ttagatagga aagcttctaa ttgttctgag ccaccaatgt
     9541 caccaccaga aattggtaaa tgttttgttt gaactgtttt gtacttttta ccagtttctt
     9601 tcgctaatgt ttttgaaacg tcatctaata atttttcggc catttttctg taaccagtga
     9661 gtttaccacc tgccatcgtg attaagccac tttcagaaaa ccaaacttca tctttacgtg
     9721 aaatttcaga tggatctttt ccttcttcat agataagtgg acgaacccca gcccaacttg
     9781 attcaatatc tttttcggta atatgcacat cagggaacat ataattaatc gccttaatca
     9841 cataattatg atcagattca agtgcttttg gattaattac tgcttcgtcg tacactgtat
     9901 ccgtcgttcc aacatacact tttttatcgc gcggaatagc aaagaccatc cggccatcag
     9961 gtgtatcaaa gtataccgct tgttccatcg ggaatttttg tttatcaata accaaatgaa
    10021 ttccttttgt taagcgtaaa tgtttgttgt ttgttgcata atctaatttt cttactttat
    10081 ctacccaagg accagcagca ttaataacac gatgtccttt aatatcgtat gctttgcccg
    10141 acaaacgatc tgttacggtt acaccaacta cttgtttatt gtcatcatat aagaaatgct
    10201 ccgcttttgt atagttaata gcattcgctc cgagttctac tgcttttttc ataacttcta
    10261 ttgttaaacg cgcatcatcc gtgcggtatt ccacgtagta accagaacct tttaaaccgt
    10321 cttttttcac gaatggattt ttggctaatg tttcttttgc gcttaaaatt ttacgtcgtt
    10381 catttttctt tacccctgct aaatagtcat ataaacgaat accaaatgaa gcggtagttt
    10441 tacccatatt gccgccttta tggaatggga gcatcatcca ttcaggagtc gttacgtgtg
    10501 gtccattttc gtagactatc gcacgttctt ttcctaaatc tgctacttct ttaatttcaa
    10561 attgttgtaa atatcttaat ccaccgtgga ctaattttgt tgaacggctc gatgttccgc
    10621 tcgcgaaatc acccatttca acaagtgcga cactcatacc tcgtgaagtg gcatctaaag
    10681 cgattcctgc ccctgtaatc ccgccaccga cgatgactaa atcaaatttt tcctcttgaa
    10741 gatttctttc gattgtttct ctgtcaaacg ctgaaaataa ttgtaccatt ttgtttgccc
    10801 ccttcaaatt gtttaccgtc tgaattatgc cttcttggtt acttttccac ttttcaatct
    10861 aactgaaacg ctttaagttt aaaaacaaaa aaagagactg caaagtaaga cgattgcgct
    10921 cgccttttgc agtctctccg aatctcagac aataatattt attaacttac tatgattata
    10981 tcttttaacg atttataatg aaagcgtttt gctcatggag gttatttatt atttcttagt
    11041 gccactgcct tttcaggaaa atcagtcatc attcctttaa cattggcatc tataaaatgc
    11101 gtgatagttt cctccttatt caccgtccaa tagcgtgctg cgatttgctt taaaatcggg
    11161 tttttcattg cttttactgg tggatgcact gcatcaagct gaattttttc atgtaatggc
    11221 aatacttcat ctaagttttc atgtgtaatt aaagctagtc tggcagtagg atctaaatct
    11281 ctcagccgaa tgagagtatc tgggttaaag gaagaataca ttcgtttgac ttcgggaaat
    11341 ttatccgcta atgctaaaac tttttgttcg attccttcat attcaaagac atccgttttc
    11401 aactcaatgt ttagtatcat atctgtgcca ctcaccaact taaaaatttc ttccaaagtt
    11461 ggcacacgga ttttacggaa aagccgttta ccaatcacta attttttcac ttctgaaagt
    11521 gtgtaatctt ttaaaaagcc agacccattt gtagtcctat cgacgcgttc atcgtgcatg
    11581 acgattaatt cgccactttt caaaacatga atgtctaact cgataccatc cgcaccggat
    11641 aaaatcgctg ctttcatagc tggtagtgta ttttctggat gcgtcccact actgcctcga
    11701 tgggcaaaaa tttccgtcaa aatgcttccc cccaaactat ttacttatat ttactataac
    11761 aaaaataagc aaatatactc
//
LOCUS       DASDYO010000101        11595 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.101, whole genome shotgun sequence.
ACCESSION   DASDYO010000101 DASDYO010000000
VERSION     DASDYO010000101.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11595)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11595)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11595
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.101"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(78..986)
                     /locus_tag="U0290_002223"
     CDS             complement(78..986)
                     /locus_tag="U0290_002223"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464216.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheV"
                     /protein_id="HEM2302261.1"
                     /translation="MTEEKGILLQSGTNELEIVTFTVGENLFCINVLKVKEIIHPLEV
                     TPVPDSNPAIEGVSQVRGEIMPVVNLARVMKLPEIEPENTKFIITELNQMKIVFRVDE
                     VHRIQRISWEQIEEPEKLSIGLEELAVGIVKLDGNLVLLLDYEKIIYEISGNADFAVT
                     GEDRMARKVNREEKTIFIAEDSQMLRQLLEDTLHEAGYTNLQFFANGREAQEHIFKLL
                     KEQKEQTFENVNLLITDIEMPQMDGHHLTKVIKEDEIGRELPVVIFSSLITEDLEHKG
                     AGVGADAQVSKPNIHQLINILDELVL"
     gene            complement(999..2912)
                     /locus_tag="U0290_002224"
     CDS             complement(999..2912)
                     /locus_tag="U0290_002224"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464215.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM2302262.1"
                     /translation="MRPLISICMIVKNEAHILRQSLASFRKFTEEIIIVDTGSTDETK
                     EIAQEFTDFVYDFEWTGNFSDARNFAAKHATGKWILAIDADECLEEESYRKLEKQLKS
                     PIEPIQMAQIISFTGEKGRVTTTNQMARVYKNDGTICFRGVIHEQLEAVDKHPIAAGV
                     AEVKIYHYGYMTEIVEKQDKSDRNLRLLEKEVKNNKNSGFVHFNIGQEMNRLGNKKEA
                     LKEFSEAFRLRDHNHYIWAKLSAYHIAELLEQEKRYDESLAIIEEARIIWPNVPEFPL
                     KKANILYVNHQLEDAKEIYQSLLENTAIDYQSIVLYEATNFMPHKMLGTIYLEEKDYT
                     RAMTHFSKAYAENSSDYGVMFQMIMLLSKFHQPKEIFAFMERHHFISSTETGLRLLSM
                     TTQQGYAELSELIVQSLTDVYPPIAEATEVKIATIRNVFPVISESAILFGIKEELIDA
                     ADLCLWHYENPQLPIERVMKNSDVGDIYDFIFENGPRISKKRYLFVLERAIALGKGEF
                     ADYLLALRNVYHDSINSHIADLFFQYDFADIALDFYNIVDADEVTKQGYINLINYLVD
                     AEVLDEALAIAERGIDNFSTDFRFYLWTIKIDTENRANRISEAMDEFPNNRYLAKLLD
                     EVTMLQDTVTNNR"
     gene            complement(2935..3435)
                     /locus_tag="U0290_002225"
     CDS             complement(2935..3435)
                     /locus_tag="U0290_002225"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464214.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302263.1"
                     /translation="MQLFLSGSHTLTDYDKQEIQAYLEKFAPVNHIHLLCYKSIENEV
                     LQFFLKKEHLAPRLSIYTFAPKECLPEPFLSTIDYLECLGSSYQSFGYFDTVIAKPTY
                     EKFLAQIVSKMDLVCCFYNGDKPTDVIPVDVAKSFDVQSMIYDLPKAKKHLLHRASSD
                     KIKLVN"
     gene            complement(3445..4272)
                     /gene="motB"
                     /locus_tag="U0290_002226"
     CDS             complement(3445..4272)
                     /gene="motB"
                     /locus_tag="U0290_002226"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464213.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor protein MotB"
                     /protein_id="HEM2302264.1"
                     /translation="MAKRRKKPQEEHVDETWLIPYSDLLTLLLALFIVLFASSSVDAK
                     KFEQMGNAFKKIVEEGAAGNQAYVSKEKGPDDPNVNAVLKAMEEQDKKKEATEQEKAK
                     KAAAALLKKQNEEKIEAFKKQIDSYIAAEHLGAKMTTKYSDEGLLITIRDDILFQSGS
                     AELTAGKREIAKEIGELFAQGKGTMEGIVSGHTDNVPISTSIYSSNWELSVARAVNFM
                     EAIIQENSEVNPGEFSARGYGEFRPVAKNDIAANREKNRRVEIMVRPINRDTLDEDE"
     gene            complement(4232..5083)
                     /gene="motA"
                     /locus_tag="U0290_002227"
     CDS             complement(4232..5083)
                     /gene="motA"
                     /locus_tag="U0290_002227"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor stator protein MotA"
                     /protein_id="HEM2302265.1"
                     /translation="MEITTIIGLVLAVIVIAGSFMIQNISLAMLFSAEALIVIILGTI
                     TAVMMAHPWSDVKVVPKLFKILFTKEKMPDKVEVLVQYKEYADEIRRSGVLALEDSVD
                     EIEDPFMKRGMRLVVDGQSSPEFLRDVLEEEVASMEERHAAYAKIFASAGAYAPTLGV
                     LGAAMGLIHAMGEMSNPDKLSEAIAAAFVCTIFGIFTGYVLWTPFANKLKVKSQKEVH
                     LRYMMIEGVVALQERNAPRVVEERLLSFLSPKEKDVLRNGKGKKTREVEEIERGQASQ
                     ETAGGTR"
     gene            complement(5110..5445)
                     /locus_tag="U0290_002228"
     CDS             complement(5110..5445)
                     /locus_tag="U0290_002228"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3964 family protein"
                     /protein_id="HEM2302266.1"
                     /translation="MGRIENIKNLAFFEDKPGLAEQILMLEKKTQLFLPNEFEIRQTV
                     GYEIGDKEVILGRLESFYFLALKGVGEDNYRSQAFASEADAKAFFVHLPEMENELVAF
                     WLNEVELVR"
     gene            complement(5470..6258)
                     /locus_tag="U0290_002229"
     CDS             complement(5470..6258)
                     /locus_tag="U0290_002229"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protein-glutamate O-methyltransferase CheR"
                     /protein_id="HEM2302267.1"
                     /translation="MIPDLEKDYLYFTRVVKRDLGLDLALYKETQMKRRILSFIVKKQ
                     YITFGEFFKHLKKDAVLLDEFISLITINVSSFFRNRNRWDALEKQVLPRLLEDSRGKL
                     RVWSAACSSGEEPYSLAMMMERSVGTRHYDILATDLEPAILKRAVIGEYQSRQMEELT
                     EQERHTAFVEKGDTYQILPKYRKSIRFRRHDLLTDYYEKGFDLIVCRNVLIYFTAEGK
                     HQAYQKFAESLRRGGVLFIGGSEQILNPADYGLATLNNFFYIKT"
     gene            complement(6287..7066)
                     /gene="flgG"
                     /locus_tag="U0290_002230"
     CDS             complement(6287..7066)
                     /gene="flgG"
                     /locus_tag="U0290_002230"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar basal-body rod protein FlgG"
                     /protein_id="HEM2302268.1"
                     /translation="MKGLYIGAAGMMNYMQHIQVHSNNVANAQTPGFKFDQLTSEVIS
                     RNKVNYQNGPVARQVGTIDYGVRPAATHINLTAGSSYITNRDRDFFMQDTDPTQGSNF
                     FITAKNGEISLSRGGQFHSDQFGFLRTADGANLLSATGEAIQVGQKTSIRAEANGDLY
                     NAETGQYLGRLGTKFVSANQADSLVKDGEGRLHVNGINTMNLPAGQGIIQNGVIETSN
                     VDLGVEMVQLMDNQRMVQASKNVVNMFDKVYDKEATGLIRQ"
     gene            complement(7063..8286)
                     /gene="flhF"
                     /locus_tag="U0290_002231"
     CDS             complement(7063..8286)
                     /gene="flhF"
                     /locus_tag="U0290_002231"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhF"
                     /protein_id="HEM2302269.1"
                     /translation="MGKHLVEKMEIFKANSKREIHKKIRLVTNEPYKITDERVTKLGI
                     FKKQYEVTAVIMSEVAIADGRMDFQETFQKSVVKNRPKTDDLLKKEKLLEMLAAGAEL
                     AQSTPLLEERKTQEEELSAMRLELAALNRELAVKMREEREQNSDFVKFLKGRGISDTY
                     VADFMQAGRKQFKQVETAHLDDITDWFVPYLSGKLAVEDSFDLSNHRIISLIGQTGVG
                     KTTTLVKLGWQLLKQNRTVGFITTDTFRSGAVEQFQGYADKLDVELIVATSPAELEEA
                     VQYMTYVNCVDHILIDTVGRNYLAEESVSEISAYTDVVHPDLTCFTFSSGMKSADVMT
                     ILPKLAEIPIDGFIITKMDETTRIGDLYTVMQETNLPVLYMTDGQNITENIFRPKSRW
                     LAERFVGTDRRRVLE"
     gene            complement(8308..10383)
                     /locus_tag="U0290_002232"
     CDS             complement(8308..10383)
                     /locus_tag="U0290_002232"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464207.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar biosynthesis protein FlhA"
                     /protein_id="HEM2302270.1"
                     /translation="MGNLGAIKKYFAILIAVSFVIALIVPLPPFVLDLVLVTILAFSV
                     LVYMRATSIKDWNELKSFPSLLLLMGIFRVSINISTTRAILTTGDPGQVIKQFGNFVI
                     GSNFVVGIVIFIILIVFQFIVANGSSRTAEVAARFTLDALPGKQMAIDADLNQRLITE
                     PEAKEKRAYLNMETEFYGAMDGAGKFVKGDVLFTVLLAVVNIVFGLIVGMVQGGLSFG
                     EAAVKYTELTIGDGIVSQIGSLLMAMSAGVIVTRVFDGSDDNVAVGIFKELMQNSVVV
                     YTLAAMFILMGVFSPLPTIPFVGIGVVLGIIGYRTQFNLKKKEQLELEKEMELIQSET
                     SSAEAEHNQAFGAAREKFPVVVELGLNIAALVKQKMNGETAKDKVVLMRKSILQDLGI
                     GVPGINFKDNTSFQPRGKYEIKVKGVAVASGVLKAGHLLALKTPGVMMDLDAEPTKDP
                     IFGEDGYWILPGELEDAQMKNYQVLEPLSILITHLDVVLRKNLHELLMRQQIKDLIDG
                     LADENQILIDEIKKKEIDYSLIQGVLRQLLKEGISVRDLPTIVEGIIDGQTIYPNDLD
                     GITAFVRERISKVICEQAKNQDGKIYALLLQDSIEMDTEIVNTPYYGYALNWALDKEL
                     PIIQKVRDTVNKAQLTGREPVILTRRKDFRFGFVRVLERYQLDVPVLSISELSPETEV
                     EQIALIEPT"
     gene            complement(10430..11476)
                     /gene="flhB"
                     /locus_tag="U0290_002233"
     CDS             complement(10430..11476)
                     /gene="flhB"
                     /locus_tag="U0290_002233"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FlhB"
                     /protein_id="HEM2302271.1"
                     /translation="MAKDNKTEKATPRRIKKARNEGNVAKSKELNNAFSLLIVAGLLY
                     FFGEMFIKNTIQAFVALLKQPPKLANMESYSLFYLMEFGKVLMPIMVMVVIFGLMNYG
                     VQVGILFSAKAVKPQFKRLNPANYFKRVFSVKGIVEVVKALLLITLLSYVAYIGFRDH
                     LDTLISYTGQNWLYSLGQIFALFKNEFLALFLVIAVIGLLDFFYQRYDYKKGLRMSKQ
                     EIKDEMKDSEGRPEVKQRQRSIARGLLQGSITKKMADATFVVNNPTHISVVMRYDKTK
                     DHAPKLLVKGEDELALFIRQVADTDGVPMITNRQLARSIYYTTNPDEYIQEDLYKDVI
                     EVMKELMDADKIKF"
     gene            complement(11492..>11595)
                     /locus_tag="U0290_002234"
     CDS             complement(11492..>11595)
                     /locus_tag="U0290_002234"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464205.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="flagellar type III secretion system protein
                     FliR"
                     /protein_id="HEM2302272.1"
                     /translation="LACAVPILSTVFKNLTDEMIQQYVSFFDYLLKK"
BASE COUNT         3178 a         2715 c         1957 g         3745 t
ORIGIN      
        1 tttacgtttt tataaattat ttttttaaat aaaataaaga agtgtttgaa cagaaaaggt
       61 tgttcaaaca cttcttttta caaaactagc tcatctaaaa tattaatgag ttgatggata
      121 tttggtttac ttacttgcgc atcggctcca acacctgcgc ctttatgttc cagatcttct
      181 gtaattaacg aagagaaaat aacaactggc aattcacggc caatttcatc ttctttgatt
      241 acttttgtta aatgatgtcc gtccatttgc ggcatttcaa tatcggtgat taataagtta
      301 acattttcaa acgtttgttc tttttgttct ttgagcaatt tgaaaatatg ctcttgtgct
      361 tcgcgaccat ttgcaaagaa ctgcagattt gtataaccgg cctcatgaag cgtatcttca
      421 agcagttggc gcagcatttg tgagtcctcg gcaataaaaa tcgtcttctc ttcacgattt
      481 acttttcgcg ccatacggtc ttcacctgtg acagcaaaat cagcatttcc gctaatttcg
      541 taaataattt tttcataatc taataagagt actaagttgc cgtctaattt tacgataccg
      601 actgctaatt cttctaaacc aatcgatagt ttttctggtt cttcaatttg ttcccacgaa
      661 atacgttgga tacgatgaac ctcatcgaca cggaaaacga ttttcatttg gtttagttct
      721 gtgataatga atttcgtgtt ttctggctca atttctggca atttcatcac acgggcaagg
      781 ttcacaactg gcatgatttc gccgcgaact tgggaaacgc cttcaattgc cgggttcgaa
      841 tctggtacag gagttacttc gagcggatga ataatttctt tcacttttaa aacgttaata
      901 caaaataagt tttcgccaac agtaaatgta acaatttcca attcatttgt tccactttgt
      961 agtaaaattc ctttttcttc tgtcatatta ctggcctcct atcgattgtt tgtaacagtg
     1021 tcttgaagca tggtcacttc atccaacagt tttgctaaat agcggttatt cggaaattcg
     1081 tccattgcct cactaattcg attcgcgcga ttttcggtat caattttgat tgtccaaagg
     1141 taaaagcgga aatcagtact aaaattatca atgccacgtt ctgcaatcgc aagtgcctca
     1201 tccagtactt cggcatctac taaataatta attaggttga tatagccttg tttggtcact
     1261 tcgtctgcgt caacgatatt gtagaaatcg agcgcgatat ccgcaaaatc atattggaaa
     1321 aataaatctg caatgtggct attaatgctg tcatgataaa cgttacgaag tgccaataag
     1381 taatcagcaa actcgccttt tccaagtgca atcgcccgct ctaatacaaa taaataacgt
     1441 ttcttgctaa ttcgtggacc gttttcaaag ataaaatcat aaatgtcgcc aacatcgcta
     1501 tttttcatga cacgttcgat tggtaattgc ggattttcat agtgccacaa acataagtca
     1561 gctgcatcaa tcaactcttc tttaataccg aataaaatag cagattcgct aattaccggg
     1621 aagacgttgc ggatcgttgc aatcttcacc tctgttgctt ctgcgatagg tggatacaca
     1681 tcggttagtg attgaacaat tagttcagat aattctgcgt agccttgttg ggttgtcatc
     1741 gaaagtaagc gcaaaccagt ttctgtgcta gagataaagt gatgacgttc cataaaggca
     1801 aaaatttctt ttggttgatg gaatttgcta agcagcataa tcatttggaa catcacaccg
     1861 taatcagaac tattttccgc ataggcttta gaaaaatgag tcatcgcgcg cgtataatct
     1921 ttttcttcta agtaaatcgt tccgagcatt ttgtgtggca tgaaattggt tgcttcgtaa
     1981 agcacgattg attggtagtc aattgctgta ttttctagca gactttgata aatttctttc
     2041 gcatcttcga gttggtgatt cacatataaa atattagctt tttttagtgg gaactctggt
     2101 acgtttggcc aaatgattct tgcttcttcg ataatggcca agctttcatc atagcgcttt
     2161 tcttgttcga gtagttcggc aatatgataa gcacttagtt tcgcccaaat gtagtgattg
     2221 tggtcacgta gtcggaacgc ttcggaaaat tctttcagcg cttccttctt attaccaagt
     2281 cggttcattt cttgcccaat gttaaaatgt acaaatccgc tatttttatt gttttttact
     2341 tctttttcta ataaacgtaa attacggtct gatttgtctt gtttttcgac aatctccgtc
     2401 atatagccat aatgataaat ttttacttca gcaaccccag ctgcaatcgg gtgtttgtct
     2461 accgcttcta gttgttcatg aatgacgcca cggaagcaaa tcgttccgtc atttttataa
     2521 accctcgcca tttggttcgt tgttgtcact cgcccttttt cccctgtaaa gctaataatt
     2581 tgcgccattt gaattggttc gattggtgat tttaactgtt tttctaattt gcgataactt
     2641 tcttcttcca aacattcgtc tgcatcaatc gctaaaatcc atttgcccgt tgcatgtttg
     2701 gccgcaaagt ttcttgcatc agaaaagttg ccagtccatt caaagtcata gacaaaatca
     2761 gtgaattctt gtgcaatttc cttggtttcg tcagtggaac ctgtatctac aataatgatt
     2821 tcttctgtaa attttctaaa agacgctaaa ctttgtcgta aaatatgtgc ttcatttttg
     2881 actatcatac aaatcgaaat taacggccgc atgaatcttc cctctttcta tcaattaatt
     2941 cactaatttt attttatcgc tgctcgctcg gtgcagtaga tgttttttcg cttttggcaa
     3001 atcataaatc atactttgca catcgaacga tttcgcgaca tcgactggta tcacatcagt
     3061 cggcttatcc ccgttataaa aacaacaaac caaatccatt ttactaacaa tttgtgctaa
     3121 gaatttctca taagtcggct tagcaatcac cgtatcgaaa taaccaaatg actgatagct
     3181 actgcctaga cattccagat agtctatcgt cgataaaaac ggctctggca aacattcttt
     3241 cggtgcaaaa gtgtaaatcg atagtcgcgg tgccagatgc tcttttttca agaaaaattg
     3301 taacacttca ttttcaatcg acttataaca aagcaagtga atgtggttca ctggtgcaaa
     3361 tttttcgagg tatgcttgta tttcttgttt gtcatagtcg gttaacgtat gcgaaccact
     3421 taaaaaaagt tgcaaacact tcacctactc atcttcatct agcgtatcgc gattaattgg
     3481 gcgtaccatg atttctacac gccgattttt ttcgcgattt gctgcgatat catttttggc
     3541 gacaggtctg aattctccgt agccgcgagc actgaactcg cctgggttta cttcgctatt
     3601 ttcttgaatg attgcttcca tgaaattaac ggcgcgcgcg acacttaatt cccagttgga
     3661 agagtaaatt gaggtgctta ttggcacatt atcggtatgt ccagaaacaa tcccttccat
     3721 cgttcctttt ccttgcgcaa aaagttcgcc gatttctttg gcaatctcgc gttttcctgc
     3781 agttaattct gcacttcccg actggaataa aatatcatca cggatagtta tcaaaagccc
     3841 ttcatccgag tatttcgttg tcatttttgc tcccaaatgt tctgctgcaa tataactatc
     3901 aatttgtttt ttaaaggctt caatcttttc ttcgttttgc tttttaagta aggccgctgc
     3961 tgcttttttg gctttctctt gttcggttgc ttctttcttt ttatcttgct cttccatcgc
     4021 cttcaagact gcattcacat taggatcatc tggtcctttt tctttggata catatgcttg
     4081 attgcctgcc gcgccttcct ctacaatttt cttaaatgca tttcccattt gttcaaactt
     4141 cttagcatca acggaactgg aggcaaacag aacgatgaat agcgcaagta aaagtgtcag
     4201 caaatcacta tatggaatta accacgtttc atcaacgtgt tcctcctgcg gtttcttgcg
     4261 acgcttggcc acgctcaatt tcctccactt ctctcgtttt cttccctttt ccatttcgca
     4321 gcacatcttt ctcttttgga cttaaaaaag ataataaacg ttcttccaca acccgtggtg
     4381 catttcgctc ttgaagcgcg acgactccct caatcatcat atatctcaaa tgcacttctt
     4441 tttgtgattt cacttttaat ttattggcaa atggcgtcca aagtacgtaa ccggtaaaaa
     4501 taccgaaaat cgtacaaaca aacgccgcgg ctattgcttc gctaagtttg tccgggttcg
     4561 acatttcccc catcgcatga atgagtccca tcgctgctcc gagtacacca agcgtcggcg
     4621 catatgctcc agctgatgca aaaatcttcg cataagcagc atggcgttct tccatactcg
     4681 ctacttcttc ttccaaaacg tcccgtaaaa attctgggga agactgccca tctacaacta
     4741 agcgcatgcc tcgtttcata aatggatctt caatttcatc gacagaatct tccagcgcaa
     4801 gtaccccgct acgcctaatt tcgtctgcgt attctttgta ttgcacgagt acttccactt
     4861 tgtccggcat cttctctttt gtgaaaagaa ttttaaaaag tttcggtact acttttacat
     4921 cactccatgg gtgcgccatc ataacagccg taattgtccc aagaatgatg acaattaaag
     4981 cttcagcgct aaataacatc gccagtgata tattttgaat catgaacgaa cctgcaatga
     5041 ctatcactgc caacacaagt cctataatcg ttgttatttc cacgttactt catctcccac
     5101 ctacttattt cagcgaacta attccacttc atttaaccaa aaggcaacta actcgttttc
     5161 catttctggt aaatgaacga aaaacgcttt agcatccgct tcactggcaa atgcttgcga
     5221 gcggtagtta tcttctccca caccttttaa agcgagaaaa taaaatgact cgagtcggcc
     5281 tagaataact tctttatccc cgatttcata gccaactgtt tgtctaattt caaattcatt
     5341 tggtaagaaa agttgtgttt tcttttcaag catgagaatt tgttctgcga gtccaggttt
     5401 gtcctcaaaa aacgctaaat ttttaatgtt ttctattcgt cccatctaac caactccatt
     5461 tcttttttgc taggttttta tgtagaaaaa attatttaat gtggcaagcc cgtaatcagc
     5521 tgggttcaaa atctgttctg acccgccgat gaaaagaacg ccgccacgtc ttagtgactc
     5581 tgcaaacttc tgatatgctt ggtgttttcc ttctgctgtg aaataaatca acacattacg
     5641 gcaaacaatt aaatcaaaac ctttttcgta ataatcggtc agcaaatcgt gccgtctaaa
     5701 acgaatcgac tttcgatatt taggcaaaat ctgatatgta tccccttttt caacaaatgc
     5761 cgtatgacgt tcttgttcgg ttagttcttc catttgacgg ctttgatatt ctccaatgac
     5821 cgcgcgtttt aaaatagctg gttcgaggtc tgtggctaaa atatcataat gccttgtgcc
     5881 aactgaacgt tccatcatca tcgctagcga gtacggttcc tcccctgatg aacaagccgc
     5941 actccaaacc cgtaacttcc cgcgactatc ttccagcaac cttggaagta cttgtttttc
     6001 cagcgcatcc cagcgattgc gattacggaa aaacgacgaa acattaatcg taatcaaact
     6061 aatgaactca tctaaaagaa cggcatcttt tttgagatgt ttgaaaaatt ctccaaatgt
     6121 aatatattgc ttcttcacga taaaagataa aattcgacgt ttcatttgcg tttctttata
     6181 aagcgctaaa tctaaaccta agtccctttt gacgacacga gtaaagtaaa gataatcctt
     6241 ttccaaatct ggaatcattc tttttcccct ccccctagct aggtcgttac tgacgaatta
     6301 atccagttgc ttctttgtcg tacactttat caaacatatt aacgacattt tttgaagctt
     6361 gtaccatgcg ctggttatcc atgagttgta ccatttctac gcctaaatca acattagacg
     6421 tttcgataac tccattttgg ataatccctt gtccagctgg taaattcatt gtgtttatgc
     6481 catttacatg aagtctacct tcgccgtctt tcaccaaact atctgcttga ttagcggaaa
     6541 caaatttggt tccaaggcgg cccaagtatt gacctgtttc cgcattgtat aaatcaccat
     6601 ttgcttcggc gcgaatcgac gttttttgcc ccacttgaat cgcttcccca gtcgcactga
     6661 gtaaattggc gccatctgct gtccgcagaa aaccaaactg atcggagtga aactgcccgc
     6721 cacgtgaaag tgaaatttcg ccatttttag cagtgatgaa aaaattactt ccttgcgtag
     6781 gatccgtgtc ttgcataaag aaatctcggt cgcggttcgt aatatagctt gatcccgctg
     6841 tcaaattaat atgcgtcgca gcaggtcgaa caccgtaatc aattgtccca acttgcctag
     6901 cgacaggccc attttgatag ttcactttgt ttcgcgaaat cacttcactc gtaagctgat
     6961 caaatttgaa tcctggcgtc tgcgcgttag ccacgttatt agaatgaact tgaatatgtt
     7021 gcatgtagtt catcatccct gctgcgccaa tgtataaccc cttcattcca gcacccgcct
     7081 tctatctgtc ccaacaaacc gctccgctaa ccaacgactt tttggtctga aaatattttc
     7141 cgtaatattt tgtccatctg tcatgtataa caccggcaaa tttgtttctt gcatcaccgt
     7201 gtataaatca ccaatacgcg tcgtttcatc catttttgta atgataaaac catcgattgg
     7261 aatttctgct agttttggta aaatcgtcat cacatccgca cttttcattc cagaagaaaa
     7321 tgtaaaacac gttaagtccg gatgaacaac atcggtatag gcagaaattt cactcactga
     7381 ttcctcggct aagtaatttc tcccaaccgt atcaatcaaa atatgatcca cgcagttaac
     7441 atacgtcata tactgcacag cttcttctag ttcagccggg ctcgtcgcaa cgataagctc
     7501 cacatcgagt ttgtccgcat aaccttggaa ctgctccact gcgcctgacc gaaaagtatc
     7561 tgtagtgata aagcccactg tccgattttg ctttaacagc tgccatccaa gtttcacaag
     7621 cgtggtcgtt ttcccaacac ccgtttgccc aatcaaggaa ataattcggt ggttgcttaa
     7681 atcaaacgaa tcttccaccg ctaattttcc ggataaataa ggaacgaacc aatctgtaat
     7741 atcatccaaa tgcgccgttt ctacttgctt aaactgcttc cgcccagcct gcatgaagtc
     7801 cgccacatac gtatcactaa ttccgcgacc cttcaaaaac ttcacgaaat cactgttttg
     7861 ttcacgctcc tcgcgcattt tcactgcaag ctcgcggttt aaagccgcta gttcgagacg
     7921 catcgctgac aattcttctt cctgtgtttt tcgttcttct aaaagcggcg ttgactgtgc
     7981 tagttccgct cccgcagcaa gcatttctag taatttttct ttttttaata agtcgtctgt
     8041 tttcggtctg tttttgacaa ccgatttttg aaatgtttct tgaaagtcca ttcgaccatc
     8101 tgctatcgcc acttcactca taatgaccgc cgtcacttca tactgtttct taaaaatacc
     8161 aagctttgtg acacgttcat ccgtaatttt atatggctca ttcgtgacta agcgaatttt
     8221 tttatgtatt tctcgcttgg agttcgcctt aaaaatttcc atcttttcta ctaaatgttt
     8281 tcccatttct acggattacc tccctcatca agttggttca atcagtgcaa tttgctccac
     8341 ttctgtttcc ggcgacagtt cactaatgga gagcaccggc acgtccaatt gatatctttc
     8401 caaaactcgc acaaagccaa atcgaaaatc ttttcgcctt gttaaaatga caggttcacg
     8461 accagtgagt tgcgctttat tcacggtatc tcttactttt tgaatgattg gcagttcctt
     8521 gtcgagcgcc cagttcagcg cgtagccata atacggcgtg ttgacaattt ctgtatccat
     8581 ttcaatcgaa tcttgcaaaa gtagcgcgta aattttgcca tcttgatttt tcgcttgttc
     8641 acaaatgact ttcgaaatcc gctccctgac aaatgccgta atgccatcaa gatcattcgg
     8701 ataaatcgtt tgtccatcaa taatcccttc gacaatcgtt ggtaaatcgc gaaccgaaat
     8761 cccttctttc aagagttgtc gtagcacccc ttgaattagc gaataatcaa tttctttttt
     8821 cttaatttca tcaattaaaa tttgattttc atcagcaagt ccgtcaatta aatctttaat
     8881 ttgttggcgc atcagaagct catgcaagtt cttccgcagc acaacatcca aatgcgtaat
     8941 taaaatacta agcggttcga gcacttgata gtttttcatc tgcgcatctt ctaactcacc
     9001 cggcaaaatc cagtaaccat cttccccgaa aatcggatcc ttggtcggct ccgcatcaag
     9061 gtccatcatc acgcctggtg tttttagcgc taataaatgt cctgccttta aaaccccgct
     9121 cgcaacagcc acacctttga ccttaatctc atatttcccg cgcggctgaa aactcgtatt
     9181 atctttaaaa ttaatccccg ggaccccaat acctaaatct tgtaaaattg attttcgcat
     9241 taagacgact ttatcttttg ccgtttctcc gttcattttt tgtttcacga gagccgcaat
     9301 gtttaagcca agttccacaa ctacagggaa tttttctcgt gctgcgccaa atgcttgatt
     9361 gtgttccgct tcagcagagc tggtttccga ctggataagc tccatttctt tttcaagttc
     9421 caattgctct tttttcttta aattgaattg cgtacgatag ccgattattc caagcactac
     9481 gccaattcca acaaatggaa tcgttggtag tgggctaaat acacccatta agataaacat
     9541 ggcagcgagc gtataaacga ccaccgagtt ttgcattaat tctttgaaaa tcccgaccgc
     9601 aacgttatca tctgatccgt caaatacccg agttacaata accccagctg acatcgccat
     9661 taaaagtgaa ccaatctggc tcacgatgcc atccccgatt gttaactccg tatatttcac
     9721 cgcagcttcc ccgaacgaaa gcccaccttg gaccataccg acaattaaac cgaatacaat
     9781 atttacaact gcaagcaaaa cggtaaaaag aacatcccct tttacaaatt tcccagctcc
     9841 gtccatcgct ccgtagaatt cggtttccat attcaaatat gcgcgttttt ctttcgcttc
     9901 cggctctgta atcaaccgtt gattcaaatc cgcatcaatc gccatttgtt taccgggcaa
     9961 agcatccagc gtaaatcttg ctgctacctc cgctgtccgc gaagaaccat ttgccacaat
    10021 aaactgaaag acgattaaaa taatgaaaat aacaatccca acaacaaaat tactaccaat
    10081 aacaaaattc ccaaattgtt taattacttg tcctggatca ccagtagtta agatcgcccg
    10141 tgtcgtcgaa atatttatcg aaacccgaaa tatccccatc aaaagtagta aagacggaaa
    10201 tgactttaat tcattccaat ctttaattga tgtggcacgc atgtaaacta acacagagaa
    10261 cgccaagatc gtcacaagca ctaaatccaa tacaaacgga ggtaatggca caataagtgc
    10321 aataacaaac gagaccgcaa tcaagatagc aaaatatttt tttatagcac ctaaattccc
    10381 cattttgaaa cctgcctttt ctaagattag aaaggtcgct catatgttgt tagaacttga
    10441 ttttgtctgc gtccatcaat tctttcatca cttcaataac atctttatat aaatcttctt
    10501 gtatgtattc atctggattc gtcgtatagt aaatacttcg tgccagttgt ctatttgtaa
    10561 tcatcggcac cccgtccgta tccgccacct gacgaataaa cagtgccagc tcgtcttccc
    10621 ctttaacgag caatttcggt gcatgatctt ttgttttgtc ataacgcatc acaacggaaa
    10681 tatgtgtcgg gttgttcacc acaaaagtcg cgtccgccat ttttttcgta atcgaacctt
    10741 ggagaagccc acgcgcaata cttctttggc gctgtttcac ttccggtcga ccttctgaat
    10801 ctttcatttc gtccttaatt tcttgcttcg acatccgcaa gcctttttta tagtcataac
    10861 gctggtaaaa gaagtcaagc agccctatta ctgcgattac aaggaagagc gccagaaatt
    10921 catttttgaa taaagcgaaa atttgtccga gtgagtaaag ccaattttgc ccggtgtaac
    10981 taatgagcgt gtctagatga tcccgaaagc caatatacgc cacgtatgaa agcaacgtaa
    11041 ttaaaagtag cgctttcacc acctcgacaa ttcccttcac actgaacact cgcttaaagt
    11101 agttcgctgg atttagtcgt ttgaactgag gtttcactgc tttcgcggaa aataaaatcc
    11161 cgacttgcac gccgtagttc atcaaaccaa aaatcacaac catcaccata atcggcatca
    11221 acactttgcc aaactccatc aagtaaaaca aactgtaact ttccatgttc gcaagcttcg
    11281 gtggctgttt caaaagagca acaaatgctt gaatcgtgtt tttaataaac atttctccaa
    11341 aaaaataaag aagcccagct acaattagca gtgaaaaagc attatttagt tctttacttt
    11401 tcgccacatt accttcattt cgagctttct taatgcggcg tggcgttgct ttttccgtct
    11461 tattatcctt cgccaagctt ttttctcctc cctatttttt cagtaaataa tcaaaaaacg
    11521 acacatattg ttgaatcatc tcatctgtca aatttttaaa aactgtactc aagataggaa
    11581 cagcacacgc aagga
//
LOCUS       DASDYO010000102        11303 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.102, whole genome shotgun sequence.
ACCESSION   DASDYO010000102 DASDYO010000000
VERSION     DASDYO010000102.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11303)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11303)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11303
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.102"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..1015)
                     /locus_tag="U0290_002235"
     CDS             complement(<1..1015)
                     /locus_tag="U0290_002235"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="minor capsid protein"
                     /protein_id="HEM2302273.1"
                     /translation="MVKRRVPATRYPHNLEKSYTKQLVKLSTALSDMFLHEFDTSISA
                     ILKTSQNRSDAFREDGISDAVQAVLNKVKALSFGLFNPRDKYSIASKHVKAINTTNKS
                     QIGNQVRSQGIEPTQSEPWLSEFMDASIAENVSYIGSIADEFNAKTEQIILRGVKNGQ
                     SLKDMRDELVTQVGTSKNKAEFIANDQTGTIFGQMTAERHKKAGIPGFTWRDSGDAAV
                     RPSHHARNGKVYSYDDPTAQIPGTDYRCRCTAGPEFDESVVKAATNERKQQELEDKAT
                     LKNAYSEVAQAAQKAPDNVKDLISSNITANSFEIVRDNNIAYAYRPSTKKIIINPSNK
                     AIKY"
     gene            complement(1008..2393)
                     /locus_tag="U0290_002236"
     CDS             complement(1008..2393)
                     /locus_tag="U0290_002236"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1073 domain-containing protein"
                     /protein_id="HEM2302274.1"
                     /translation="MYSIDKAKQAKIDSKIVNRNDFMVGHGKANSRDKLTRQVPGNGQ
                     KLDIKACENLYASNSIAMNIIDIISEDMVRAGWSLKTDNKEIKKNIESKWRKLKTKDR
                     FQKLYADKRLYGDGFLSIGVVSSNREQADLSTAIDPKTIKSIPYINTFNTQKVTQLYL
                     NQDMFSEHFGEVEFFEVNRVSQLGEEILSGTTASTSEQIHRSRIIHEQGLRFEGETKG
                     RSIFESLYDIITVMDTSLWSVGQILYDFAFKVYKTDDIDTLNKDDKANLTAMLDFMFR
                     TEALAIIKGDEQLTKESTNVSGMKDLLDYGWDYLAGAVRMPKTVLKGQEAGTLTGAQY
                     DVMNYYARVSSIQENRLRPQLEYLTRLLMWASEDCGPSIDPDSFEWAIEFNPLWNLDS
                     KTDAEVRKLTAEADQIYIVNGVLDPDEVKETRFGRFGLENSSKFSGDSAEIDKLAKLV
                     YDAYAKKSADG"
     gene            complement(2407..3867)
                     /gene="terL"
                     /locus_tag="U0290_002237"
     CDS             complement(2407..3867)
                     /gene="terL"
                     /locus_tag="U0290_002237"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_019168086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage terminase large subunit"
                     /protein_id="HEM2302275.1"
                     /translation="MLLASNNKEIDREYLYDEAVREIARREFAEFFFLSHGKRYNLLR
                     HQKLIADKLQKIIDGEQKHYIIEIPPQHGKSTVITETFPAYFLMRNPDKLAMVVSYSE
                     ELFKKFGRKNREKFRMYANDLFGLNISSMSSSVSNWGIEDHLGELYSTSILGGATGRG
                     SDLLIVDDPVKNRADADSKTMRDKVYSEWQDTFYSRLSASGSVIIIMTRWHEDDLAGR
                     LLKEMSLPWEEIKIPAIAEENDLLGRKIGEALAPEIGKDEKWAAQTKEVTGSRGWTAL
                     YQQRPSPADGNIFKRHWIKYYVPDAEFKKKYGLGDEVKILPRLFDKSAQSWDLTFKDT
                     KNSDFVAGHVWKRKQGEFFFIDREHDRMDLPASINAINRMTTKHPDVIAKYIEDKANG
                     PAVMQVLKGRLTGMIPVDPEGGKEARANAVSPLFEAGNVYFPHPLYKPWSEDVVEELV
                     AFPNTSHDDDVDALTQALVKLMIGQQSLLDRYKNLM"
     gene            complement(3845..4714)
                     /locus_tag="U0290_002238"
     CDS             complement(3845..4714)
                     /locus_tag="U0290_002238"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987328.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302276.1"
                     /translation="MARKRDPRRIEAKNMWLESGGKMKLVDIANKLGCSSNQIRKWKS
                     TEKWSIDDEIESVPKSNSNVTNEKERYHKLKGNSNAIGNRGGAPPGNGNAVGNVGGSA
                     PIGNKNAVTTGEFETLSWEFLTEREQQLYESMDGNLVTHINQTIRELEIRKRRMMERI
                     ANIEKSMSDIERSTLKQLREKEYIGEKNGKKVILHRQELVTVEERERVTAKIDRILSI
                     ENSLNNVTSQLIRAIKQQSDLEQAEVKKGLIRSQTSLNKERIIKPEAASTSPDFSQMS
                     TEELKEYAASLKQ"
     gene            complement(4751..4984)
                     /locus_tag="U0290_002239"
     CDS             complement(4751..4984)
                     /locus_tag="U0290_002239"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302277.1"
                     /translation="MTLIFWTKNGQEMEFDLVENVEIDEKIITFDYYGEGEKRGVAFI
                     LNNLAGMAVEDENSESESKDGASWFKVYRGYVK"
     gene            complement(5012..5242)
                     /locus_tag="U0290_002240"
     CDS             complement(5012..5242)
                     /locus_tag="U0290_002240"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302278.1"
                     /translation="MKKENERSIDENLNDDLLDLEISKALEEAKTDEEYKKIIRATLG
                     KWLNNLQEGNIRLESVNDLKTLIEADRLLRRD"
     gene            complement(5372..5569)
                     /locus_tag="U0290_002241"
     CDS             complement(5372..5569)
                     /locus_tag="U0290_002241"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302279.1"
                     /translation="MREDIQRLKDKADTAKMKYHRNLIDRETAKKQIIPYAEAFNSRS
                     KEIAKKYNQKPKLLSVAAFLR"
     gene            complement(5617..6954)
                     /locus_tag="U0290_002242"
     CDS             complement(5617..6954)
                     /locus_tag="U0290_002242"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB N-terminal domain-containing protein"
                     /protein_id="HEM2302280.1"
                     /translation="MNIQEIEVSKINPAAYNPRIDLMPGDLEYEKLKKSIEEFGYIDP
                     LIWNERTGNLVGGHQRYKILLEGKPENLTVSVVNLDINQEKALNIALNKIEGGWSTDK
                     LGELLKSINDEEMLNLTGFSAIEIDELIKEFELPPATVDKVKENPLDSNLFESFLFPP
                     FSYLDSKTKRWRDRKDQWKNLGIRSELGREGNLTFASSLRSSSLTGTSIFDPVLCELA
                     YRWFTPGESAKIYDPFAGGSVRGIVAKVLGHEYTGIDLRKEQVEANHINAKEIGLDGI
                     NWITDNSLNADKYIEDNAMDLLFTCPPYFDLEVYSDNKEDISNMEYEEFIKVYSEILD
                     KGANKLKDNRFAIVVISDVRDKNGFYRDLTGLTKSVFEKNGIYFYNDLILLNSLGSGA
                     LRARRNMRNRKLVRIHQNVLVFYKGNPDEIQEHFPILEVLEDNLEEALESIDI"
     gene            complement(6951..7244)
                     /locus_tag="U0290_002243"
     CDS             complement(6951..7244)
                     /locus_tag="U0290_002243"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731505.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302281.1"
                     /translation="MKNFVYVVANVSDGNSLIDFFVKTKSNYITEINYREGYIILSNE
                     CWYFQVMNESDFADVGNVDGYRFSQKAKISLSKTGNYQTIRKKLSDLYKESSK"
     gene            complement(7773..8540)
                     /locus_tag="U0290_002244"
     CDS             complement(7773..8540)
                     /locus_tag="U0290_002244"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage antirepressor KilAC domain-containing
                     protein"
                     /protein_id="HEM2302282.1"
                     /translation="MNNLAVLDKNNTLNSREVAEMVEKRHSDLLRDIETYIRYINQNA
                     KLRSDDFFSESTYQAGTGKDYKCYEITKMGCEMIANKLTGAKGIQFTALFVQKFNKLE
                     AKEMQTFYIPGTYAEALTLAAKQAELNEQLMLENEVKTQTIAEYEPKVSYYDQILKSP
                     GLITVTQIAADYDLTAHKLNKILYEEQVQHKVGGQWILYKKHMNLGLTKSETVSIVHS
                     NGRLGTKVNTKWTQKGRLFIHEILENVGIQAVIDKDI"
     gene            complement(8553..8975)
                     /locus_tag="U0290_002245"
     CDS             complement(8553..8975)
                     /locus_tag="U0290_002245"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302283.1"
                     /translation="MALFELPQIDNVRTKRNVIRALEKYKIMRVRLGERRMPKLTSTL
                     TIVPPSFNNEFHSTTEESAIWNVDAVNEAKAYVKLIDHHINQLPERSRQVILTKFIEE
                     NSDYEAMLAIHVSHSQYKEEKRKAIERLAYQLNIVVEK"
     gene            complement(9056..9616)
                     /locus_tag="U0290_002246"
     CDS             complement(9056..9616)
                     /locus_tag="U0290_002246"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987346.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302284.1"
                     /translation="MYKTEKRTLRQNKMIHALISDIVKHTYNDFEATKPRSFSNDCRV
                     VKETLKVAYAAEANLPGDFSTAKLSKIQARDFISSIIEFCFQFDIPLSASGLQMTDDI
                     NRYLFLCIKYRKCAVTGRRGEIHHVDPVGAGRDRRNYDHSKSRLICLSREMHTEAHQI
                     GWLTFKSKYHVDGIILSPEAVKELNI"
     gene            complement(9628..9879)
                     /locus_tag="U0290_002247"
     CDS             complement(9628..9879)
                     /locus_tag="U0290_002247"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3850 domain-containing protein"
                     /protein_id="HEM2302285.1"
                     /translation="MTVHKLKILPEFFEKKRTLVKAFEIRKNDRNFEVGDTLVLQEFD
                     NGEYTGREYWEDVVYITDYLQKEGIVVMGTLPNEREYPF"
     gene            complement(10199..10474)
                     /locus_tag="U0290_002248"
     CDS             complement(10199..10474)
                     /locus_tag="U0290_002248"
                     /inference="COORDINATES: protein motif:HMM:NF019467.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1642 domain-containing protein"
                     /protein_id="HEM2302286.1"
                     /translation="MKKITQEYVEGVKDYNGLTVIKAPVVSEAVADWFEANKDNLGLE
                     IWMYIYNFDKHKNDCDSFCMFMNDKSGKQLETLISMQYGYYVQKEES"
     gene            complement(10471..10803)
                     /locus_tag="U0290_002249"
     CDS             complement(10471..10803)
                     /locus_tag="U0290_002249"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014930675.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302287.1"
                     /translation="MPGLIAKQPNGLYCRISTVVEAQTHHDMTKEELEYYLINERSLD
                     INLVTLDDWLAFYEVDFNVAIKQLGSGSGNLTFEEAKAWLIEVGYQHADKFMEKIAYK
                     WDEWEEGK"
     gene            complement(10803..10991)
                     /locus_tag="U0290_002250"
     CDS             complement(10803..10991)
                     /locus_tag="U0290_002250"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302288.1"
                     /translation="MKKYELIMTREEVYHLHRVLMQDIILSTWGVSTKDPEDEEAFLA
                     HIELSKGLARKVTRSEVK"
     gene            complement(10988..11197)
                     /locus_tag="U0290_002251"
     CDS             complement(10988..11197)
                     /locus_tag="U0290_002251"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731494.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302289.1"
                     /translation="MNDKKVRFYVSTGMHGSLETETFLLKADLNIEFDILTPEQLEKE
                     ITESYDDWLANNIDSGWSIEKEVEE"
     gene            complement(11194..>11303)
                     /locus_tag="U0290_002252"
     CDS             complement(11194..>11303)
                     /locus_tag="U0290_002252"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003769972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302290.1"
                     /translation="EDFDTRFYFDASVDSAAMTVIGNIHENPELMEVAE"
BASE COUNT         3008 a         2466 c         1690 g         4139 t
ORIGIN      
        1 aatattttat agctttgttg cttggattaa taattatctt cttagttgaa ggacgataag
       61 catatgcaat attattatct cgcactatct caaaagaatt tgcagtaatg ttactactta
      121 ttaagtcctt aacattatcc ggagcttttt gagcagcttg agctacttca ctataagcgt
      181 tttttaatgt tgctttatct tctagctctt gttgtttacg ctcatttgta gcagctttaa
      241 ctacagactc atcaaattca ggaccagctg tgcaacgaca tctataatca gttccaggaa
      301 tctgtgcagt tggatcatca tatgaataaa ctttaccatt tcttgcgtgg tgtgatggtc
      361 taaccgctgc atctcctgaa tctctccaag taaagccggg tatgcctgct ttcttatgcc
      421 tctcggctgt catctgccca aagattgttc cggtctggtc attagcgata aattcagctt
      481 tattttttga tgtacctact tgcgtaacca gttcatcacg catatctttt aatgattggc
      541 cattttttac accacgcaaa attatttgtt ctgttttggc gttaaattcg tctgcaattg
      601 aaccaatata acttacattt tcggcaatcg aagcgtccat gaactcactt aaccatggtt
      661 cagactgtgt gggctcaatt ccttgtgagc gcacttgatt gcctatttgt gatttattag
      721 tcgtatttat tgctttaaca tgtttacttg caatagaata cttgtctcgc gggttgaata
      781 atccaaaact tagcgccttt actttattta aaacagcttg aacggcatca cttataccat
      841 cttctctgaa cgcatcagag cgattttgag acgtttttag aatggcacta atactggtgt
      901 caaattcatg taaaaacatg tcagataaag ccgtgctaag ctttactagc tgtttagtat
      961 aactcttttc taaattatgt ggatagcgag tcgcaggaac gcgtctttta accatctgcg
     1021 ctcttcttcg catacgcgtc atagacaagc ttagctaatt tatcaatttc tgcgctatca
     1081 ccactgaatt tagaagaatt ctctaatccg aaacgaccaa agcgtgtttc tttcacttcg
     1141 tcagggtcta atacaccatt tacaatataa atctgatctg cttctgcagt tagtttccta
     1201 acttcggcat ctgtcttact gtctaagttc caaagcgggt taaattcaat agcccattca
     1261 aaagaatctg gatcaatact cggaccacaa tcttcacttg cccacatcag caatcttgtt
     1321 aaatattcca attgcggtcg aagtctgttt tcctgaatgg acgaaactcg cgcatagtag
     1381 ttcataacat catattgcgc acctgtaaga gtaccagctt cttgaccttt tagaactgtt
     1441 ttaggcattc gaacagcacc tgccaaataa tcccatccat aatcgagcaa atccttcatt
     1501 cctgatacat ttgtcgattc tttagtcagc tgttcatctc ctttgataat tgcgagtgcc
     1561 tcagtacgaa acataaaatc cagcattgct gttaaattcg ccttatcgtc cttatttaaa
     1621 gtgtctatat cgtcagtttt atacacttta aaagcaaagt catacaaaat ttgacctaca
     1681 gaccaaagcg acgtatccat cacggtaata atatcataaa gcgattcaaa tatggacctt
     1741 ccttttgttt cgccctcaaa acgcaatcct tgctcgtgta ttatcctcga acggtgaatt
     1801 tgttctgaag tagacgctgt tgttccggat aatatttctt ctcctagttg ggacacgcga
     1861 ttaacttcaa aaaactcaac ttcaccaaag tgctcactaa acatatcttg attcaaatag
     1921 agttgagtta ctttctgtgt attaaaagta ttaatatatg gaatactttt aattgttttt
     1981 ggatcgatag cagtgctcaa atccgcctgt tcccgattac ttgatactac gccaatgctt
     2041 agaaagccat cgccgtaaag tcgtttatct gcataaagct tctgaaatcg atcctttgtt
     2101 tttaacttac gccatttcga ttcgatgttc ttttttattt ccttgttatc agtttttaaa
     2161 gaccaacctg cacggaccat atcttccgag ataatatcta taatattcat agcaatactg
     2221 ttagaagcat ataaattttc acatgctttt atatctaatt tctgcccatt gcctggaact
     2281 tgcctcgtta atttgtcacg cgagtttgct ttcccgtggc caaccatgaa atcattccta
     2341 ttaactatct ttgaatctat ctttgcttgt tttgctttat caattgaata catccgctca
     2401 ccacctttac attaagtttt tatatctatc tagcaacgat tgttgaccta tcatcaattt
     2461 aaccaaagcc tgcgtgagtg catccacatc atcatcgtgg ctagtattgg gaaacgcaac
     2521 taattcttct acaacatctt ccgaccaagg tttgtataga ggatggggga aatatacatt
     2581 ccctgcttca aacaatggag aaacagcgtt tgccctagcc tcttttccac cttcaggatc
     2641 aaccggaatc atacctgtta atctaccttt taatacttgc attacagctg gtccgttggc
     2701 tttgtcttcg atatatttcg caataacatc tggatgctta gtcgtcattc tgttaattgc
     2761 attgatactt gcaggcaagt ccattctgtc gtgttctcta tcgataaaaa agaattctcc
     2821 ttgttttcgt ttccacacat ggcccgccac aaaatcgctg ttttttgtat ccttaaatgt
     2881 taaatcccaa gattgtgcgg atttatcgaa aagacgaggt aatattttta cctcgtctcc
     2941 tagtccgtat ttctttttga attctgcatc cggaacataa tacttaatcc aatgtcgttt
     3001 aaatatgttc ccgtctgctg ggcttggtct ttgttggtat agggcagtcc aaccgcgtga
     3061 tccagtaact tcttttgtct gtgctgccca tttttcatct ttaccgattt ctggcgccaa
     3121 tgcttcacca atttttctac ctagcaaatc attctcttca gcgatagcag ggattttaat
     3181 ctcttcccaa ggcaaggaca tttctttcag taacctacct gctaagtcat cttcatgcca
     3241 acgagtcata atgattatta cactaccgct agctgataac ctagaataaa aagtatcctg
     3301 ccattccgaa tatactttgt ctctcatggt cttactgtcg gcatctgccc tattttttac
     3361 aggatcatca actattagta agtcgctccc tcgcccagtt gctccaccta gaatagatgt
     3421 actgtatagt tctcctaaat ggtcctctat gccccaatta ctcacactag atgacataga
     3481 actgatattt agaccaaata aatcatttgc gtacatcctg aatttctctc tgtttttacg
     3541 cccgaatttc ttaaaaagtt cctctgaata agaaactacc attgcaagct tgtccgggtt
     3601 tctcattaga aaataggcgg gaaaagtttc agttattact gttgacttac catgctgggg
     3661 aggaatttca ataatataat gtttttgttc cccatcaatt attttttgaa gtttgtcagc
     3721 aatcagcttc tggtgtctca ataagttata tcttttcccg tgcgacagga aaaaaaactc
     3781 tgcaaattcc cttctagcaa tctcccttac agcttcatca taaaggtatt ctctgtctat
     3841 ttctttattg tttgaggcta gcagcatact ccttcaactc ctcagtggac atttgcgaga
     3901 aatcagggga agtgctagct gcttccggct tgataattcg ttccttattt aaactagttt
     3961 gagagcgtat tagccccttt tttacctccg cttgttctag gtcactttgc tgttttatcg
     4021 ccctaattag ctgactagtg acgttattca acgagttctc aatacttaaa atgcgatcaa
     4081 ttttagcagt cactctttcg cgctcctcaa cagttactag ctcttgcctg tgaagaataa
     4141 ctttttttcc attcttctca ccgatgtatt ccttttccct aagctgttta agcgtgcttc
     4201 tttcaatatc ggacattgat ttttctatgt ttgcgatgcg ttccatcata cgccgttttc
     4261 taatttctaa ctcacggata gtttggttaa tgtgagttac taaattgccg tccatgctct
     4321 catacaactg ctgctctctt tctgttaaaa actcccagga caacgtttca aactcccctg
     4381 tggtaacagc gttcttattg ccaattggtg cgctaccgcc aacgttacca accgcattac
     4441 cattccctgg tggtgcacct ccgcgattac cgattgcgtt gctgttccct tttaacttat
     4501 ggtaacgttc cttttcatta gtaacgttac tattcgattt aggaacgctc tctatttcgt
     4561 catcgatgga ccatttttct gttgatttcc acttccgtat ctgattagaa gagcagccta
     4621 gtttatttgc aatatcaacc agtttcattt ttccgccgga ttcaagccac atatttttcg
     4681 cttcaattct tcgtgggtcg cgtttccttg ccatatcact gtcaccacct gtcttgtgtt
     4741 gagtttgttt ttactttaca taacccctgt acactttaaa ccaagatgcg ccatctttac
     4801 tttcactctc cgaattctca tcctctacag ccatgccagc aagattattt aatataaacg
     4861 ctacgcctct tttttcacct tctccatagt aatcgaatgt aataattttc tcgtcaatct
     4921 ctacattttc aactagatca aattccatct cttgtccatt tttagtccaa aatataaggg
     4981 tcatgtttat tctccaatct ttcaataaaa attaatctct tcttagtaat ctatctgctt
     5041 caattagtgt tttaaggtca tttacagatt caagacgtat attgccttcc tgcaaattat
     5101 taagccattt ccctagtgta gcgcgaataa ttttcttgta ttcttcatct gtcttagctt
     5161 cttcaagagc tttacttatc tctaaatcta ataaatcatc atttaagttt tcatcaatcg
     5221 aacgctcgtt ctcctttttc attgcctttt caccagcttt ctattagaat agaaaaagag
     5281 atagcaatgt ctaaaacctc gcgaggtctg tttgctatct cacgccagtg atggcggtat
     5341 ggggaagggg tgttaacgca cctcttcttt tttatcttaa aaacgctgct actgaaagta
     5401 atttaggctt ttgattatac tttttagcaa tctctttcga tctagaatta aaagcttcag
     5461 cgtatggaat tatttgtttc ttagctgttt ctctatcaat taaatttcga tgatatttca
     5521 ttttagctgt gtccgcttta tcttttaatc gttgaatatc ttctctcatg tacaccactc
     5581 cgtttccttt atgctgatac tgtaagggat attcgtttaa atgtcgatag attcaagcgc
     5641 ttcttctaaa ttatcttcca gtacctctaa aatggggaaa tgttcttgta tctcatcagg
     5701 atttccttta taaaatacta atacattctg gtgaatacgg actaacttcc tgttacgcat
     5761 atttctgcga gctcttaatg ctcctgaacc tagcgagttt aacaaaatca agtcattata
     5821 gaagtaaata ccattcttct caaataccga tttagtaagg cctgttaaat ccctataaaa
     5881 accattttta tctcgtacat ctgaaataac cacaatggca aaccgattat cttttaattt
     5941 attcgcaccc ttatctaata tctcggaata aactttaata aattcctcgt attccatgtt
     6001 gctaatgtct tctttattat ctgaatatac ttctaaatca aagtatggtg ggcatgtaaa
     6061 taataagtcc atcgcgttat cttcaatata tttatccgcg tttaagctat tatcagtaat
     6121 ccaattaatg ccgtctaatc cgatttcttt agcattaatg tggttagctt ctacttgttc
     6181 ttttcttaaa tcaattccag tgtactcatg cccaagaact ttcgctacaa tcccccggac
     6241 agaaccaccg gcgaatggat cgtatatctt tgcagattct ccaggagtaa accatctata
     6301 ggccagttcg caaagcacgg ggtcgaaaat gctcgttcct gtcaaactag atgaacgcaa
     6361 actagatgca aacgtaagat taccttctct ccctaactca cttctaatac ctaaattttt
     6421 ccattggtcc ttcctatccc tccacctctt tgtttttgaa tctaaatacg aaaaaggagg
     6481 aaacaaaaaa gactcgaaca gattcgagtc taacgggttt tcttttactt tatctactgt
     6541 agctggaggt aattcgaatt ctttaattaa ttcatctatt tcaattgctg agaatcctgt
     6601 taaatttagc atttcttcat cattaatgct ttttagtaat tcgcctaatt tatcagtact
     6661 ccatccacct tctattttat ttaaagcaat attcaatgct ttctcttgat ttatatctag
     6721 gttaactact gatacagtta agttttccgg ttttccctcg agtaaaattt tataacgctg
     6781 atggccaccg actaaattac cagttctttc attccaaatc agtgggtcaa tatagccaaa
     6841 ttcttcaatt gattttttta atttttcata ttccaagtca ccaggcatta aatctattct
     6901 cggattgtat gcagccggat taattttgct tacttctatt tcttggatat tcatttgctc
     6961 gactccttgt ataaatcact taatttcttg cgtatcgttt gatagtttcc tgttttagaa
     7021 agagatattt ttgctttttg tgaaaatcga taaccatcaa cattgcccac atcagcaaaa
     7081 tcactctcat tcataacttg aaaataccaa cactcatttg ataaaataat gtaaccttca
     7141 cgataattta tttcggtaat gtaattactt tttgttttta caaagaagtc gattaagctg
     7201 ttaccatcac tcacatttgc aacaacatac acaaaatttt tcatgcgttc tctccttttc
     7261 tacataaaaa aacctccata tcagaacgta tctgccctgg gggtatggag gtattgacgt
     7321 tcaaagcact cggcaaggat ttgcaccttg catgaactaa gtaatttttg ctataggttt
     7381 cttaagctaa ggcttacgct ccttagccat attagttctt acctccaatg cgtctacctg
     7441 ttccgccacg agtgttggat atgatgcgtc tcatatcaga ccaacgataa gatacaatgc
     7501 ctctttctgg gcaaactata tatttttaaa ttgcgattga tttatgatta aagcataatg
     7561 ccttgccaaa aatatttacc tgtagccacg atgatacata tcgttttccg tccatgctat
     7621 atttagtcat ttcatgtttc ataattacca gctcctattt cttattttct tgacaataac
     7681 atcttaccac ggaattcctt gttttttgtc cggtaaaaag ccggtaaaaa gtcagcaaaa
     7741 agtttaattt tatccggtaa aaagccggtt ttttaaatat ccttgtcgat aacagcctga
     7801 attccgacat tttcaagaat ttcatgtata aataatctcc ctttttgagt ccacttggtg
     7861 tttacttttg ttcctagacg tccattactg tgaactatgc tgaccgtttc tgatttagtc
     7921 aaacctaaat tcatatgttt tttgtataat atccactgac caccaacttt atgctgcacc
     7981 tgctcttcgt ataatatttt attgagctta tgtgcggtca agtcataatc agctgcaatt
     8041 tgcgtaacag ttattaatcc aggagatttt aaaatctgat cataataact cacttttggt
     8101 tcatattcgg ctatagtttg tgtttttact tcattttcta acattaactg ctcatttagt
     8161 tcagcttgtt ttgctgcaag tgtaagtgct tcagcgtaag ttcctgggat atagaaagtt
     8221 tgcatttcct ttgcttctaa tttgttgaac ttttgtacaa ataaagctgt aaactgaatg
     8281 ccttttgccc cagttaattt attcgctatc atttcacagc ccatttttgt aatttcatag
     8341 cacttataat ctttcccggt gccagcttga taagtagatt cactgaaaaa atcatcagaa
     8401 cgcaattttg cgttttgatt gatatatcta atatacgttt cgatatcacg cagtaaatca
     8461 gagtgtcttt tttctaccat ttcagcaact tcacgactgt ttaatgtatt atttttatct
     8521 aatactgcta aattattcat tgtgttccct cctcattttt caactactat attaagttgg
     8581 taggctagac gttcaattgc ttttctcttt tcttctttat attgcgagtg gcttacatgt
     8641 atggccaaca tagcttcata atcactattt tcttcaatga atttagttag tatcacttgc
     8701 ctactccgtt caggaagttg gttgatgtga tgatcaatca atttaacata tgcttttgct
     8761 tcatttactg catctacatt ccatattgca ctttcttccg tcgtagaatg gaattcatta
     8821 ttaaatgatg gtggcactat ggtcaatgta gaagttaact ttggcattct tctctcgccg
     8881 agtctaactc tcataatttt atatttttct aaagctctta ttacgtttct ttttgttcta
     8941 acattgtcaa tttgtggtag ttcgaacagc gccatcacac gcaacccctc cattgtggta
     9001 taatgatttt gtctaggaat cacattccac gccggagcgg tcgctctggc tttttttata
     9061 tatttaattc ttttactgct tccggactta aaattattcc atcaacatgg tatttacttt
     9121 taaatgttag ccatccgatt tggtgagctt ctgtgtgcat ttctcgagat aaacagatta
     9181 atcttgattt actgtgatca taatttcttc tatctcttcc agcacctacg ggatcaacat
     9241 gatgtatttc gcctctacga cctgttacag cgcattttct gtatttgata cataagaaca
     9301 ggtatctatt gatatcatcc gtcatttgca gtcctgatgc ggataacggt atatcaaatt
     9361 gaaaacaaaa ctctataata gaacttatga agtcgcgagc ttgtattttt gataacttcg
     9421 ctgtactgaa atcacccggt aaattcgctt cagctgcata cgctactttt aacgtttctt
     9481 taactactcg gcaatcattg ctgaagcttc tcggctttgt agcttcaaaa tcgttataag
     9541 tgtgctttac tatgtcacta atcaaagcat gaatcatttt gttttgccgt aatgttcgtt
     9601 tttctgtttt atacatgtca tcacccttta aaacggatat tctcgctcat ttggtagtgt
     9661 acccatgact acaattcctt ctttttgcaa gtagtcggta atataaacaa catcttccca
     9721 atactctcgc ccagtatatt ccccgttatc aaattcttgt aataccagcg tgtcacccac
     9781 ttcgaaatta cgatcattct ttcttatttc gaacgctttt acaagtgttc tttttttctc
     9841 gaaaaactcg ggtaaaatct ttaatttgtg tactgtcatt tataaatcac ctttgtattt
     9901 ccggtttctc ggtgtactat ctccattcga ttattaagat tttttactat gagccaatta
     9961 tccggattaa gaccattatt ttttagcatc attgcttggt ttctggttaa ctttttaccg
    10021 tttttcatta ttatcttcct cgcaatcttc acatgttctc ggatatcccg gatttgcatc
    10081 atctatgaat actccgcaat tttcacacaa aataccctct aaaatcattt cagttgtttc
    10141 gcccatacat tcgtcctcct atacttttgt tatctctatt tttagaatcc atttccgttt
    10201 aactttcctc cttctgcaca taatagccgt attgcataga tattagtgtt tccaattgtt
    10261 ttcctgattt atcattcata aacatacaaa agctatcaca atcatttttg tgtttatcaa
    10321 aattgtaaat gtacatccaa atttctaatc ctaaattatc cttatttgct tcaaaccaat
    10381 cagctacagc ttccgaaacc actggcgctt taatcaccgt taatccatta taatctttga
    10441 cgccttctac atattcttgt gttatttttt tcatttgcct tcctcccact catcccactt
    10501 atacgctatt ttctccataa atttgtctgc atgttgataa ccaacttcta tcagccatgc
    10561 tttagcttct tcaaaagtta aattccctga acctgaaccg agttgtttaa tagctacatt
    10621 gaaatcgact tcatagaatg ctaaccaatc atctaacgtt acaagattta tatctaatga
    10681 cctttcatta attaaataat attctaattc ctctttcgtc atgtcgtgat gcgtttgcgc
    10741 ttctactaca gttgatattc gacaatataa tccgtttggt tgtttagcaa ttaatcctgg
    10801 cattatttaa cctccgatcg cgtaactttt cttgccaaac ccttactcaa ctctatatga
    10861 gctaaaaaag cttcttcatc ttccgggtcc ttagtgctta ccccccacgt gctgagtatt
    10921 atatcttgca ttaagacacg atggagatga taaacttctt ctctcgtcat gattaattcg
    10981 tattttttca ttcctccacc tctttctcga tagaccagcc agaatcaata ttatttgcta
    11041 accagtcgtc gtaagactct gtaatctctt tttctaattg ttcaggtgtt aatatatcga
    11101 actcaatatt caagtccgct ttcaaaagaa atgtttctgt ttcaagcgat ccgtgcatac
    11161 cagtagaaac gtagaatctt acttttttat cgttcattcc gccacctcca tcaattccgg
    11221 attttcgtgt atgttgccta taactgtcat agctgctgaa tcaacgctag catcaaagta
    11281 gaatctggta tcgaaatctt ccg
//
LOCUS       DASDYO010000103        11293 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.103, whole genome shotgun sequence.
ACCESSION   DASDYO010000103 DASDYO010000000
VERSION     DASDYO010000103.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11293)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11293)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11293
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.103"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            296..1990
                     /gene="ilvD"
                     /locus_tag="U0290_002253"
     CDS             296..1990
                     /gene="ilvD"
                     /locus_tag="U0290_002253"
                     /EC_number="4.2.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxy-acid dehydratase"
                     /protein_id="HEM2302291.1"
                     /translation="MRSDKIKKGVEQAPARSLLHATGQIKSPGDMDKPFIAICNSYID
                     IVPGHVHLRELADVAKEAIREAGGIPFEFNTIGVDDGIAMGHIGMRYSLPSREVIADA
                     AETVINAHWFDGVFYIPNCDKITPGMLLASVRTNVPAIFCSGGPMKAGLSAHGKALTL
                     SSVFEAVGAFKDGSMSQEDFLDMEANACPTCGSCAGMFTANSMNCLMEILGMAVPGNG
                     TTLAVSDARRDLIRESAFHLMDLVKKDIRPRDIITKDAIDDAFALDMAMGGSTNTVLH
                     TLALANEAGIEDYDLERINDIAKRVPYLSKIAPSSSYSMHDVHEAGGVSAIVKELVDL
                     GGAIHPDRITVTGKTIRENVADAKINNTDVIHPKENPYSPVGGLSMLFGNIAPKGAAI
                     KVGGVDPSVQVFKGEAICFSSHDEAVEAIDNHTVREGHVVVIRYEGPKGGPGMPEMLA
                     PTSSIVGRGLGKDVALITDGRFSGATRGIAVGHISPEAAAGGPIALVHDGDIITIDLP
                     NRTLNVDVSDEVLEERRKELPKFKAKVKTGYLARYTALVTSAHTGGILQIPEDLID"
     gene            2008..3729
                     /gene="ilvB"
                     /locus_tag="U0290_002254"
     CDS             2008..3729
                     /gene="ilvB"
                     /locus_tag="U0290_002254"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biosynthetic-type acetolactate synthase large
                     subunit"
                     /protein_id="HEM2302292.1"
                     /translation="MIDTTKTNEKATKKQNKSGAELLIDSLKKQQVEMIFGYPGGAVL
                     PLYDAFYDCDIPHILTRHEQGAIHAAEGYARVTGKPGVVVVTSGPGATNVLTGIADAM
                     SDSIPLVIFTGQVHTPGIGKDAFQEADMIGLTIPITKYNYQVRDVRDLPKIVNEAFHI
                     ASTGRKGPVVVDIPKDMGIIQTESVRPDTIDLPGYQPTYSPNPLQLEKLMQSLSAASK
                     PLILAGAGVNHARATAELLEFAERYQIPIVNTLLGLGSFPQSHDLFLGMGGMHGSYAA
                     NMALTDCDLLINFGSRFDDRLASAPKEFATKATIAHIDIDPAEIGKIIETQIPIVADI
                     NETLTQLLQMELPVHPDTSHWYKLNMTRKNRHPFNFDRTKKAEIKPQRVIELIGEITQ
                     GEALVSTDVGQHQMWAAQFYPFQFDHQIITSGGLGTMGFGFPAAVGAQLAFPDKTVVA
                     IVGDGGFQMTNQELAILNDYQINVKTVIINNGSLGMVRQWQEKFHGERYSHSIFTSQP
                     DFVKLAEAYGVKGVRLTNPETLEKDLRKAFAHPGPIVIDVHVAKDELVLPMVPSGKPN
                     HQMEGVE"
     gene            3730..4221
                     /gene="ilvN"
                     /locus_tag="U0290_002255"
     CDS             3730..4221
                     /gene="ilvN"
                     /locus_tag="U0290_002255"
                     /EC_number="2.2.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acetolactate synthase small subunit"
                     /protein_id="HEM2302293.1"
                     /translation="MRRIITATVNNSSGVLNRITGVISRRQYNIDSISVGWTEIPNVS
                     RITIVVHVDSLYEIEQVTKQLNKQIDVLKVSDITDDAHIERELALLKINSPAALRSEL
                     NAVIEPFRATVIDVGTKNVVIQVTGTSEKIDAFVDTVRPYGIKQMARTGVTGFTRSPK
                     KMG"
     gene            4320..5315
                     /gene="ilvC"
                     /locus_tag="U0290_002256"
     CDS             4320..5315
                     /gene="ilvC"
                     /locus_tag="U0290_002256"
                     /EC_number="1.1.1.86"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketol-acid reductoisomerase"
                     /protein_id="HEM2302294.1"
                     /translation="MTKVYYEDAVKNNALEGKTVAVIGYGSQGHAHSQNLRDNGNNVI
                     IGIREGKSAESARNDGFDVYSVSEAAEKADVIMILLPDETQGETYENEIKPNLKAGNA
                     LVFAHGFNIHFDVINPPNDVDVFLVAPKGPGHLVRRTFVEGGAVPSLFAIYQDATGNA
                     RDTALSYAKGIGATRAGVIETTFKEETETDLFGEQAVLCGGATHLIQAGFETLVEAGY
                     QPELAYFEVLHEMKLIVDLMYEGGMEKMRHSISNTAEYGDYVSGPRVVTADTKKAMKE
                     VLTDIQNGNFAKSFIDDNKNGFKEFHRMRKEQQGHQIEKVGAELREMMPFVKPQH"
     gene            5473..7011
                     /locus_tag="U0290_002257"
     CDS             5473..7011
                     /locus_tag="U0290_002257"
                     /EC_number="2.3.3.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-isopropylmalate synthase"
                     /protein_id="HEM2302295.1"
                     /translation="MKKIQFFDTTLRDGEQTPGVNFDVKEKIQIALQLEKLGIDVIEA
                     GFPISSPGDFECVKAIAKAIKHCSVTGLARCVEGDIDRAEEALKDAVSPQIHIFLATS
                     DVHMEYKLKMSRAEVLASIKHHISYARQKFDVVQFSPEDATRSDRAFLIEAVQTAIDA
                     GATVINIPDTVGYTNPTEFGQLFQDLRREIKQFDDIIFASHCHDDLGMATANALAAIE
                     NGARRVEGTINGIGERAGNTALEEVAVALHIRKDFYQAETNIVLNQFKNSSDLISRLS
                     GMPVPRNKAVIGGNAYAHESGIHQDGVLKNPDTYEIITPALVGVDKNSLPLGKLSGKH
                     AFNTRMEEMGYTLTEQEQKDAFKRFKQLADAKKEVTEEDLHALILGQSSESADDFELK
                     HLQVQYVTGGVQGAIVRIEERDGALVEDAATGSGSIEAIYNTINRLMKQDIELTDYRI
                     QAITAGQDAQAEVHVVIKNDKGAVFHGIGIDFDVLTASAKAYLQASGKSKTASKQADF
                     EEVK"
     gene            7013..8065
                     /gene="leuB"
                     /locus_tag="U0290_002258"
     CDS             7013..8065
                     /gene="leuB"
                     /locus_tag="U0290_002258"
                     /EC_number="1.1.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465512.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydrogenase"
                     /protein_id="HEM2302296.1"
                     /translation="MTYKITSLAGDGIGPEIMTSGLQVLEAVAKKYNHTFEIESHPFG
                     GAGIDVAQDPIPSSTLKACRDADAILLGAIGGPKWDNAPKRPEDGLLALRKALGLFAN
                     IRPIQVPSSITHLSPLKKEIVENTDFVVVRELTGGLYFGEPKYWDNEAAVDSLTYTRA
                     EIERIIEKAFEIAATRNKKVTSVDKANVLASSKLWRKIADEVASRHPDITLEHLYVDA
                     AAMLMIQRPTTFDVIVTENLFGDILSDEASVITGSLGMLPSASHAENGPSLYEPIHGS
                     APDIANQNIANPMSMISSVSMMLRQSFSLFEEADATDAATARTMQAGFLTADLGGNTS
                     TTDFTNEVLKQIEGGE"
     gene            8067..9455
                     /gene="leuC"
                     /locus_tag="U0290_002259"
     CDS             8067..9455
                     /gene="leuC"
                     /locus_tag="U0290_002259"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465513.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase large subunit"
                     /protein_id="HEM2302297.1"
                     /translation="MGKTLFDKLWNRHVIYGKEGEPQLLYVDLHLIHEVTSPQAFEGL
                     RMENRPLRRPDKTFATMDHNVPTEDIFNIQDLVAKKQIEALQTNCEEFGVTLADMGSD
                     RQGIVHMVGPETGLTQPGKVIVCGDSHTATHGAFGAIGFGIGSSEVEHVFATQTIWQQ
                     KPKSMGIEINGNLPKGVYAKDIILHLIATYGVAFGTGYAVEYYGETIRNMSMEERMTI
                     CNMAIEGGAKMGMMAPDETTFEYVRGREYAPADMDKAISDWKTLQTDPDAEYDLHIKM
                     DASILEPYVTWGTNPEMGVPFSKAFPEIKDMNYERAYEYMGLKPGQTAEEIELGYVFI
                     GSCTNARLSDLEEAARIVKGNKVKNNIRALVVPGSRQVRNAAESIGLDKIFIEAGFEW
                     REPGCSMCLGMNPDQVPDGVHCASTSNRNFEGRQGKGARTHLVSPAMAAAAAINGHFI
                     DIRKEAVISGGN"
     gene            9442..10023
                     /gene="leuD"
                     /locus_tag="U0290_002260"
     CDS             9442..10023
                     /gene="leuD"
                     /locus_tag="U0290_002260"
                     /EC_number="4.2.1.33"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465514.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-isopropylmalate dehydratase small subunit"
                     /protein_id="HEM2302298.1"
                     /translation="MEEIKVHIGKTVALMNDNIDTDQIIPKSFLKRIERTGFGEFLFD
                     SWRYLPNRKPNPDFPLNAPDRQEATILITGDNFGCGSSREHAAWALLDYRFRVIIAGS
                     YSDIFYMNCTKNGVLPIVLPREAREKLAKIAADENVTIDLPNQQVISSVGTYPFEIDA
                     TWKNKFINGLDDIAITFEHIDAIKAYEQKVDSI"
     gene            10042..>11293
                     /gene="ilvA"
                     /locus_tag="U0290_002261"
     CDS             10042..>11293
                     /gene="ilvA"
                     /locus_tag="U0290_002261"
                     /EC_number="4.3.1.19"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465515.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine ammonia-lyase"
                     /protein_id="HEM2302299.1"
                     /translation="MELVDLLVTEEDVEKAYEVLKAVVKHTPLEYDFYLSEKYHCNVY
                     LKREDLQRVRSFKLRGAFYAISRLSAEQLEKGVVCASAGNHAQGVAYTCKRMTVPATI
                     FMPTTTPQQKVSQVKFFGGSNVEVVLVGDTFDASATAAKEFAATHGQTFIPPFDDPDI
                     IAGQGSLAVEMVKDLNKAHEQADYVFAGIGGGGLISGVATYLKAKSPITKIIGVEPDG
                     APSMTAALKQNQVVTLDKIDKFVDGAAVKEVGGLTFQHAKVLVDEVTTVSEGAVCSTI
                     LDMYTKQAIVAEPAGALSVAALEIYREEIKDKTVVCIVSGGNNDINRMQEIEERSLLH
                     EGLKHYFIVNFSQRPGALKEFVNDVLGPHDDITKFEYTKKVNRGNGPVIIGVLLQDKN
                     DYEGLLERVAAFDPSYIPINDNQTL"
BASE COUNT         3449 a         2242 c         2503 g         3099 t
ORIGIN      
        1 atgaaaacga ccaaatcagt cattacaatt ttattactct agaaggactt tgagcactgt
       61 agaaatttac agtagtttga gtcctgttta cgttaaatgg gattctagca aagcatccca
      121 ttgttttcat cattggggtg ctttttcttt agctagattt cgagttttca agcatcgaga
      181 agccattatc aagcaagcag ctacttaatc atatatatta atgccacgct atttagtgaa
      241 ttctaaaaat tcagtgtcgg caaataattc ttaattagaa atggggtaaa gtcatatgcg
      301 tagtgacaaa ataaaaaaag gtgtcgaaca agctccagca agaagtttgc tgcatgctac
      361 aggtcaaatt aaaagtccag gtgatatgga taaaccattt atcgctattt gtaactctta
      421 cattgatatc gttcctggtc atgttcattt gcgagaatta gcggatgtgg ctaaagaagc
      481 tattagagaa gctggcggta tcccatttga atttaatacg attggtgtag atgacggcat
      541 tgcgatggga catatcggta tgcgctattc ccttccctct cgtgaagtta tcgcggatgc
      601 agcggaaacg gtaatcaatg cgcactggtt tgatggggtt ttctacatcc caaactgtga
      661 caaaatcacg cctggaatgc ttctcgcttc tgttcgtaca aatgtacctg ctatcttctg
      721 ttctggtggc ccaatgaaag ctggattatc tgcacacgga aaagcactca ctctctcttc
      781 tgtttttgaa gcggttggcg catttaaaga tggcagcatg tcgcaggaag attttcttga
      841 tatggaagct aatgcgtgtc cgacttgcgg atcttgcgca ggaatgttta cagcaaactc
      901 aatgaattgt ttgatggaaa tcctaggtat ggctgttccg ggaaatggta caacacttgc
      961 tgtttctgac gcacgccgtg atcttattag agaatctgct tttcatttaa tggatttagt
     1021 taaaaaagat attcgtcctc gtgacattat tacaaaagat gcgattgacg atgcttttgc
     1081 gctagatatg gcaatgggtg gttcgacaaa taccgtatta catacacttg cacttgcaaa
     1141 cgaagctggt attgaagatt atgatttgga acgtatcaat gatattgcta aacgtgttcc
     1201 ctacctttcc aaaattgcac cttcctcttc ttactcaatg catgatgttc acgaagctgg
     1261 cggtgtttca gccattgtta aagaactggt tgatctaggt ggcgcaatac atccagacag
     1321 aatcactgtt actggtaaaa cgattcgcga aaacgtagct gatgcaaaaa ttaataatac
     1381 cgatgttatt catccaaaag aaaatccgta cagcccagtt ggcggacttt cgatgttgtt
     1441 tggtaacatc gcaccaaaag gagctgctat caaagttggt ggcgtagatc cttccgtaca
     1501 agttttcaaa ggagaagcga tttgctttag ttctcatgat gaggcggtgg aagcaattga
     1561 taaccatacc gtccgcgagg ggcatgtcgt ggtcattcgc tacgaaggtc ctaaaggcgg
     1621 tccgggaatg cctgaaatgc ttgcgccaac atctagtatt gttggtcgag gtttaggaaa
     1681 agatgttgct ttgattacag atggtcgctt ttctggggct actcgtggta tcgcagttgg
     1741 ccacatttct ccagaagctg cagctggtgg tcctatcgcc cttgttcatg acggcgatat
     1801 catcacgatt gatttgccaa accggacgtt aaacgtggat gtttctgatg aggttttgga
     1861 agaacgaaga aaagaattac cgaaatttaa agctaaagta aaaactggtt accttgcaag
     1921 atatactgcg cttgtaacta gcgcccacac tggtggcatt ttgcaaattc cagaagattt
     1981 aatcgactaa aaaatgaggt gataagcgtg attgatacga cgaagacaaa tgaaaaagcg
     2041 acaaaaaagc aaaataaaag tggtgcggaa cttttaattg actccttgaa aaagcaacaa
     2101 gtcgagatga tttttggcta tccgggtggt gcggttctcc ctctctacga tgctttttac
     2161 gactgtgata ttccgcatat tctaacaaga cacgagcaag gagcgattca tgctgcggaa
     2221 ggttatgcac gtgttactgg gaaacccggt gtggtagttg taacaagtgg acctggggcg
     2281 acaaatgtat taactggtat tgcggatgca atgagtgatt cgattccatt agtgattttc
     2341 accggacaag ttcatacgcc tggtatcgga aaagatgcct tccaagaagc cgatatgatt
     2401 gggctaacca ttccaattac taaatataat taccaagtgc gtgatgttcg tgacttacca
     2461 aaaattgtca atgaagcttt tcatattgca agtactggtc gtaaaggtcc tgttgtcgtg
     2521 gatattccaa aagacatggg gattatccaa acagagtctg tacgaccaga tacgatagat
     2581 ctgccgggtt atcaaccgac ttattcacca aacccacttc aactggaaaa actaatgcaa
     2641 tctctttctg ccgcaagcaa gccactaata cttgccggag ctggcgtcaa tcatgcgaga
     2701 gctacagctg aattactaga attcgctgaa cgctatcaaa ttccaatcgt gaatacgctg
     2761 cttggtctag gaagtttccc gcaaagtcat gatttgttcc ttggtatggg cggcatgcac
     2821 ggttcatacg cggcaaacat ggcacttaca gattgcgatt tgctcattaa ttttggttcc
     2881 cgcttcgatg acaggcttgc cagtgcgcca aaagaatttg ccacaaaagc aacgattgca
     2941 catatcgata ttgatcctgc tgaaattggc aaaattatcg aaacacaaat tccgattgta
     3001 gctgatatta acgaaacact tacacaacta ctacaaatgg aacttccggt tcatcctgat
     3061 acatcccatt ggtacaaatt aaatatgacc cgtaaaaacc gtcatccttt taattttgat
     3121 agaacgaaaa aagcagaaat taaaccacag cgtgtgattg agctaattgg tgaaattacg
     3181 caaggtgaag cgcttgtttc taccgatgtt ggccagcatc aaatgtgggc ggcacagttt
     3241 tatccattcc aatttgatca tcaaattatt acgagtggcg ggcttggcac aatgggcttt
     3301 ggctttccag cagctgttgg tgcgcaactt gctttcccag ataaaacggt agtcgccatt
     3361 gttggggacg gtggtttcca aatgaccaat caagaactag cgattttaaa tgattaccaa
     3421 atcaatgtga aaacggtcat tatcaataac ggttcgctcg gcatggttcg tcagtggcaa
     3481 gaaaaattcc acggcgaaag atattctcat tcgattttca cgagccaacc agattttgtt
     3541 aaactagctg aagcttacgg tgtcaaaggg gttcgcttga cgaatcctga aacgctagaa
     3601 aaagatctaa gaaaagcctt cgctcaccct ggaccgattg tcattgacgt tcatgtggcc
     3661 aaagatgagc tagtacttcc aatggttcca agcggcaaac caaatcacca aatggaagga
     3721 gtggaataaa tgcgccgaat cattaccgct acagtaaaca actcttctgg cgtgttaaat
     3781 cgtatcactg gggttatctc cagacgccaa tacaatattg atagcatctc tgtcggctgg
     3841 accgaaatcc caaatgtttc tcggattacc atcgtcgtcc atgtcgattc cttatacgaa
     3901 atcgagcaag taactaaaca actcaataaa caaatcgatg tgctcaaagt gagcgatatt
     3961 actgacgatg cgcacatcga acgcgaacta gctttactta aaatcaactc ccctgctgcc
     4021 ttacgatctg agctaaacgc agtcatcgaa ccatttcgcg ccactgtcat tgatgtcggc
     4081 acgaaaaatg tcgtcattca agtaactgga acaagtgaaa aaatcgatgc tttcgttgac
     4141 acagttcgac cgtatggtat taagcaaatg gcgaggaccg gcgtcacagg ctttacaaga
     4201 agccctaaaa aaatgggtta aaaatcattt actacagagc agtctcttgc tttgctagca
     4261 tcagaacagc acatcgctat tctgaaatat aaaaagaaat tagttggagg ttaggaaaaa
     4321 tgacaaaagt ttattatgaa gatgcagtaa aaaacaacgc actagaaggt aaaacagtag
     4381 cagtaatcgg gtacggttcg caaggtcacg cacattctca aaatctacgt gacaatggca
     4441 ataacgttat tatcggcatt cgcgaaggaa aatctgccga atctgctaga aacgatggct
     4501 ttgatgttta ttctgttagc gaagccgctg aaaaagcaga cgttatcatg attcttttgc
     4561 cagatgaaac gcaaggtgaa acatacgaaa acgaaattaa acctaaccta aaagctggca
     4621 atgcgcttgt tttcgcacat ggtttcaaca ttcattttga cgtaattaat cctccaaacg
     4681 atgtggatgt tttcctagta gctccaaaag gtcctggtca cttagttcgc cgtacatttg
     4741 ttgaaggtgg cgcggttcct tccctattcg ctatctatca agatgccact ggaaacgcac
     4801 gcgacacagc cctttcctat gcaaaaggta ttggcgcaac tcgtgctggc gttatcgaaa
     4861 ccactttcaa agaagaaacc gaaaccgatc tatttggcga acaagcagtt ctttgtgggg
     4921 gtgcaactca ccttatccaa gctggttttg aaacacttgt agaggctggc taccaaccag
     4981 aacttgctta ttttgaagta ttacacgaaa tgaaactaat tgttgatttg atgtatgaag
     5041 gcggcatgga aaaaatgcgc cactcaatct ccaatacagc tgaatatggt gattatgttt
     5101 ccggtcctcg tgttgttaca gctgatacga aaaaagcaat gaaagaagta cttaccgaca
     5161 ttcaaaatgg taactttgct aaatcattca ttgacgacaa taaaaatggt tttaaagaat
     5221 tccatagaat gcgcaaagaa caacaaggtc atcaaatcga aaaagttggt gctgaacttc
     5281 gtgaaatgat gccgtttgtt aaaccacaac attaatactt aattcggatt gctaggtgag
     5341 atttcttgcc tagcaaccgt tatccttttt caatatgagt ttaaggaaga acctttttct
     5401 ttcctaaact gatactgaaa gcaggaaaaa tccaagcttc cctatctaat ataaaacaag
     5461 aggtgaaatc gaatgaagaa aatccagttt tttgatacta cacttagaga tggcgaacaa
     5521 acccctggag ttaattttga cgtaaaggag aaaatccaga ttgccttaca actcgaaaaa
     5581 cttggaattg atgtgattga agccggcttt ccgatttctt ctcctggaga ttttgaatgc
     5641 gttaaggcga ttgcaaaagc gattaaacat tgttctgtaa cagggctagc gcgctgtgtt
     5701 gaaggagata ttgaccgtgc cgaggaagcg ctaaaagacg ctgtttctcc gcaaatacat
     5761 atcttccttg caacgagcga tgtgcatatg gaatacaaat taaaaatgag tcgggcggaa
     5821 gttcttgctt ccattaaaca ccacattagt tatgcgagac aaaaatttga tgttgtacag
     5881 ttttcaccag aagatgcaac tcggtcagat cgtgcttttc tgattgaagc agttcaaaca
     5941 gcgattgatg caggagcaac tgtcatcaac attccagata cggtcggata tacaaacccc
     6001 accgaatttg ggcaattatt ccaagatttg cgccgcgaaa taaagcaatt tgatgatatt
     6061 attttcgctt ctcattgcca tgatgacctt ggtatggcga cagcaaacgc acttgctgca
     6121 atcgaaaatg gcgcaagacg cgtcgaaggt acgattaatg ggattggtga gcgtgctggg
     6181 aatacggcac tggaagaagt tgcggtagcg cttcatattc gcaaagattt ttatcaagct
     6241 gaaacaaaca ttgtattgaa tcaatttaaa aattcaagtg atttgattag ccgcttgtct
     6301 ggtatgcctg ttccacgtaa caaagctgta attggtggca atgcttacgc gcatgaatct
     6361 ggtattcatc aagatggtgt cctaaaaaat cctgatacgt atgaaatcat cacccctgct
     6421 cttgtcggcg tggataaaaa ctctcttcca cttggcaaac tttctggcaa acatgccttc
     6481 aatacgcgca tggaagaaat gggctacaca ctaaccgaac aagaacaaaa agatgccttt
     6541 aaacgtttca aacaattagc agatgcgaaa aaagaagtaa cagaagaaga cttgcacgcg
     6601 ttaattctcg gacaatcttc cgaatcagcc gatgatttcg aactaaaaca tttgcaagtt
     6661 caatatgtta ctggcggcgt ccaaggtgcg attgttcgca ttgaagaacg tgatggcgct
     6721 ctagtagaag acgcagcaac tggttcaggt agcattgaag cgatttataa tacgattaac
     6781 cgtcttatga aacaagatat tgaattaacc gattatcgta tccaagcaat tacagccggt
     6841 caagatgccc aagcagaagt ccatgtcgtc attaaaaatg acaaaggcgc tgtgttccat
     6901 ggtatcggta ttgattttga cgttttaact gctagtgcta aagcttattt gcaagcatca
     6961 ggcaaaagca aaaccgccag taagcaagct gatttcgagg aggtaaaata acgtgaccta
     7021 taaaattact tccttagctg gcgacggaat tggtccagaa attatgactt ctggacttca
     7081 agtattagag gcagtcgcaa aaaaatacaa ccatacgttt gaaattgaat ctcatccctt
     7141 tggcggcgca ggaattgacg tagcacaaga cccaatccct tcttccacct taaaagcgtg
     7201 ccgagacgcc gacgccattt tactcggagc aattggtggt ccaaaatggg ataatgcgcc
     7261 gaaacgtccc gaagatggcc tacttgcact tcgaaaagcg cttggtcttt tcgccaacat
     7321 tcgacctatc caagtcccaa gctccatcac gcacctttct cctttaaaaa aggaaattgt
     7381 tgagaacact gattttgtcg ttgttcgtga attgactggt ggactttatt tcggagaacc
     7441 gaaatattgg gataatgagg cagcagtgga ttcattaaca tatacccgtg cagaaatcga
     7501 gcgaattatc gagaaagctt tcgaaatcgc cgctactagg aataaaaaag ttacttcagt
     7561 agataaagcg aatgtgcttg cttctagtaa attatggcga aaaatcgctg atgaagtcgc
     7621 aagtcgtcac ccagatatca cactagaaca tctatacgtc gacgctgccg caatgcttat
     7681 gattcagcga ccaacgacct ttgatgttat cgtgacagaa aacttatttg gcgatatttt
     7741 aagtgatgaa gcgtctgtta ttactggctc gcttggaatg ctcccttctg ctagccacgc
     7801 ggaaaacgga ccatctttat acgaaccaat tcacggatct gcgccagata tcgctaacca
     7861 aaatatcgcg aatccaatgt cgatgatatc ctctgtatcc atgatgcttc gtcaatcttt
     7921 ctctcttttt gaagaagcag atgcgactga tgcagctaca gcaagaacga tgcaagctgg
     7981 atttttaact gctgacctcg gaggcaatac ttccacaact gattttacaa atgaagttct
     8041 aaaacaaatt gaaggaggag aataaaatgg ggaaaacact ttttgataaa ctttggaatc
     8101 gccatgtcat ttatggcaaa gaaggtgaac cgcaattatt atacgttgac cttcatttga
     8161 ttcatgaagt tacttctcct caagcgtttg aaggacttag aatggaaaat cggccactgc
     8221 gtagaccaga taaaacgttc gcgacaatgg atcataacgt tccaactgaa gatattttca
     8281 acattcaaga ccttgttgct aaaaaacaaa tcgaagcact gcaaaccaat tgcgaggaat
     8341 ttggcgtgac gctagctgat atgggtagtg atcgccaagg aatcgtgcat atggttggac
     8401 cagaaactgg gctaacacaa cctggaaaag tcattgtatg tggagattcg catactgcaa
     8461 ctcatggagc atttggagca attggctttg ggattggttc tagtgaagta gagcatgttt
     8521 ttgcgactca aaccatttgg caacaaaagc caaaatcaat gggcatagaa attaacggca
     8581 atcttccaaa aggtgtctat gcaaaagata ttattttgca tctgattgcc acgtatggcg
     8641 tcgcttttgg aactggctat gccgttgagt attacggcga aactattcgc aatatgtcga
     8701 tggaagaacg gatgacgatt tgtaatatgg caattgaagg tggcgcaaag atgggcatga
     8761 tggcgccaga tgaaactact tttgaatatg tgcgcggtcg tgaatacgct cccgctgata
     8821 tggataaagc aattagtgac tggaaaacgc tccaaacaga tccagatgcc gaatatgacc
     8881 ttcatatcaa aatggatgcg agcattttgg aaccgtatgt cacttgggga acgaatcccg
     8941 aaatgggagt gccattttct aaagcatttc cggaaattaa agatatgaac tatgagcgtg
     9001 cttatgaata tatggggcta aaacctggtc aaactgcaga agaaatcgag cttggctatg
     9061 tgtttattgg ttcttgtaca aatgccagac tttctgactt agaagaagct gctcgtatcg
     9121 tcaaaggaaa taaagtgaaa aataatattc gcgcactcgt ggtccctggt tctcgccaag
     9181 tgcgtaatgc ggcagaatct atcggactag ataaaatttt tatagaagct ggctttgagt
     9241 ggcgtgaacc tggttgttcg atgtgtctag gaatgaaccc tgatcaagta ccagacggcg
     9301 ttcactgtgc ttctacttcg aaccgaaatt ttgaaggtcg tcaaggtaaa ggcgctcgta
     9361 ctcatcttgt ttcaccagca atggctgctg ctgcggcaat taacgggcac tttatcgata
     9421 ttcgaaagga ggcggttatc agtggaggaa attaaagtac acattggaaa aacagtagcg
     9481 ctaatgaatg acaatattga taccgaccaa atcattccaa aaagtttctt aaaacgcatt
     9541 gagcgaacag gctttggcga atttctcttt gatagttggc gctacctgcc gaaccgtaaa
     9601 ccaaacccag acttcccgct caatgctcca gatcgtcagg aagcgactat tttaattacg
     9661 ggagataact ttggttgcgg gtcctccaga gaacatgctg cgtgggcact actagactac
     9721 cgtttccgtg taattatcgc tggcagttat agtgatatat tttatatgaa ttgtacaaaa
     9781 aacggcgtgc tccctatcgt tcttcctaga gaggcgcgtg aaaaattagc gaaaattgca
     9841 gccgatgaaa atgtgaccat tgacttgcca aatcaacaag ttatcagttc agttggtacc
     9901 tacccgtttg agattgatgc tacttggaaa aataaattta ttaatggact ggatgatatc
     9961 gccattacat ttgaacatat tgatgcgatt aaagcctatg aacaaaaagt ggattcaata
    10021 taagaaaagg tagtgaggat gatggaatta gttgatttat tagtaacaga agaagatgtc
    10081 gaaaaggcct atgaagtctt aaaggcggtc gtcaaacata cgccactaga atatgatttt
    10141 tatctttcgg aaaaatatca ttgcaatgtc tatctgaaac gcgaagattt gcaaagagtg
    10201 cgttctttta aattacgtgg tgctttttat gctatttcta gattatcagc ggaacaattg
    10261 gaaaaaggtg tggtatgtgc aagtgcggga aaccatgcgc aaggagttgc atatacgtgc
    10321 aaacgaatga ccgtcccagc tacgattttt atgccaacga ctacgccgca acaaaaagta
    10381 tcacaagtaa aatttttcgg tggtagtaat gtcgaagtgg ttttagttgg cgatacgttt
    10441 gatgcttctg caactgccgc gaaagaattt gctgcaacgc atggccaaac tttcatccct
    10501 ccgtttgatg atcctgatat tatcgctggc caaggctctc ttgctgtgga gatggtgaaa
    10561 gatttaaata aagcacatga gcaagcagat tatgtttttg caggaatcgg tggtggtggc
    10621 ttaattagcg gtgttgcaac gtatctcaaa gcaaagagcc cgattacaaa aatcatcggg
    10681 gtagaacctg atggcgcgcc ttcaatgaca gcagctttaa aacaaaatca agtcgtaaca
    10741 ctagataaaa tcgataaatt tgttgatggc gctgcggtaa aagaagttgg tggcttaacg
    10801 ttccaacatg cgaaagtatt agttgatgaa gtgacaaccg tctctgaggg agctgtttgt
    10861 tctacgattt tggatatgta tacgaagcaa gcaattgttg cagaacctgc tggagcacta
    10921 tccgttgccg cacttgaaat ttaccgtgaa gagattaaag acaagaccgt tgtctgtatt
    10981 gtaagtggcg gaaacaacga catcaaccgg atgcaagaaa ttgaagagcg ttccctctta
    11041 cacgaaggat taaaacatta ttttatcgtc aatttctcgc agcgtcctgg ggctttgaaa
    11101 gaatttgtta acgatgtgct cggtccacat gacgatatca ccaaattcga atatacgaaa
    11161 aaagtgaatc gaggtaatgg gcctgtaatt atcggtgttt tgttgcaaga taaaaatgat
    11221 tatgaaggat tgcttgagcg ggttgctgct tttgacccga gctatattcc gattaatgat
    11281 aatcaaaccc tat
//
LOCUS       DASDYO010000104        11193 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.104, whole genome shotgun sequence.
ACCESSION   DASDYO010000104 DASDYO010000000
VERSION     DASDYO010000104.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11193)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11193)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11193
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.104"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            1..339
                     /locus_tag="U0290_002262"
                     /pseudo
     CDS             1..339
                     /locus_tag="U0290_002262"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464648.1"
                     /note="frameshifted; incomplete; missing N-terminus;
                     Derived by automated computational analysis using gene
                     prediction method: Protein Homology."
                     /pseudo
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
     gene            329..766
                     /locus_tag="U0290_002263"
     CDS             329..766
                     /locus_tag="U0290_002263"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302300.1"
                     /translation="MKYEAVFINRFKSLIEEFQLNYKVISEEELALFGSNFALVFLIH
                     FDEVSLNYVCRDKDNSLVSYDVWSYFLHVFDDKDRNNLPKYNSVQERVDISFLILARG
                     LPRHWSSVLNGDDKWLEDYERYELASVPREVIGDLKDSLSLYI"
     gene            1170..1508
                     /locus_tag="U0290_002264"
     CDS             1170..1508
                     /locus_tag="U0290_002264"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302301.1"
                     /translation="MNEFPVVFEPEFMTIYLLVIISIFSTTLALSLEKYKFTIAGKAL
                     IGMCFISLFVLFVYIWVGGISSETNELIMSPIGILSVLLFTTHPYIFLILAILLGGEK
                     KPPHVPKPKK"
     gene            1526..1969
                     /locus_tag="U0290_002265"
     CDS             1526..1969
                     /locus_tag="U0290_002265"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302302.1"
                     /translation="MILINKRAEKLDYQTILAIWEKSVIATHDFLAAEDRQFYKEQIP
                     LFLDNVELFLWFAGEEVVGFSGTSERELDMLFLEPIATGNGYGSQILSWLIENKQINL
                     VDVNEQNENATRFYLKHGFVVSSRSDADGFGKPYPILHLQLKGES"
     gene            1969..2424
                     /locus_tag="U0290_002266"
     CDS             1969..2424
                     /locus_tag="U0290_002266"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464652.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MepB family protein"
                     /protein_id="HEM2302303.1"
                     /translation="MEYEQLLQSELGELEIIREELQNKEYRGMIVKTAKDGTMTRTRL
                     AKKTDKKAGYFVAFWEKDEFGKNCPFDENDSADFLCIVVIDDDLNGIFVFPRQCLIEK
                     GILTSEAGIGKMAARFYPTWCQDLNKTARKTQAWQQAYFKNYSIRKEDH"
     gene            complement(2438..3460)
                     /locus_tag="U0290_002267"
     CDS             complement(2438..3460)
                     /locus_tag="U0290_002267"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2302304.1"
                     /translation="MAKNGVDIMKRWKKITIVLSAIIVILVAILFIGNNFEMNETRVT
                     IPTTGGRLSAVVTTPKHEKPKGIIVFVHGDGAQEATQNGSYRPLMERFAKQGYISVSW
                     DKLGVGNSSGNWLNQSMEDRANEVNQVIEWMKVKYPDSTTKIGLWGASQAGWVIPKAM
                     NANNEIAFSILAAPAINWMRQGEYNTGWQAKDAGKTTKEVKQAQQNFLTDSALISKNK
                     TYESYKQNGGKEKMTPDRYNFIRKNMNQDATLDLSKVKAKIYLVLAEKDKNVDSAETK
                     DVYTQQIKKENLETKTVPNVSHQMINPAIANSELLIHIVGLMVPKYFLVDDAYLDYCE
                     QVFSKQ"
     gene            complement(3436..4029)
                     /locus_tag="U0290_002268"
     CDS             complement(3436..4029)
                     /locus_tag="U0290_002268"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302305.1"
                     /translation="MTLSIESIDSFEKDCIIEEIASLVFAGFKSKFTKMLYKETEAHD
                     IIYAFCHYIYTEKGENLLIAIQDELVCGCMFVTGKSDSHQKLYQNLRKFLPFSQCLKL
                     IFLLSLLSHKPVQNERYIDFITVSPNFRGQGIGKTLISHCLETFHDEKITLYVAKNNN
                     RAYKLYRNLGFQVIQKENSTLMGVLTGIKEWQKMEWI"
     gene            complement(4026..4745)
                     /locus_tag="U0290_002269"
     CDS             complement(4026..4745)
                     /locus_tag="U0290_002269"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2302306.1"
                     /translation="MHTLSSGEIAQLFQISKYKIRHYIDEGILVPKRNPENGYYYFEE
                     TDIYRLYQIILFRKIGFSIQEIKESLLGEKVTPMLEQAEQDLQQKIEELVGIQKTIQK
                     IIHSQKEMRLNEITFVAKDNRYFKKVPNQIIDHNTINYSQAAKHNLPDLEEPFYIFSK
                     QDTGAICLKTIKKRSDYTFPAGEYACKSFIAKDEATVEAQIQLFLEELKHPTTSIILY
                     ENIYPSLAYPDAMVYTMEVPL"
     gene            4996..6711
                     /locus_tag="U0290_002270"
     CDS             4996..6711
                     /locus_tag="U0290_002270"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein/permease"
                     /protein_id="HEM2302307.1"
                     /translation="MIDKRLFQLVEKKSLVLLILFRVLSLGLMIGLWFVFAQQLTYYL
                     EGQSVDWLWLIGTVLVVLVGKAILTKLAEKQIYQASAELRLSMRRAVMEKAFRLGNNE
                     GQLPASTLTQLAVDGIEQLEIYYSRFLPQLFYCLIASLMIFGSLVGFAWQPAIVLLIC
                     MPMIPIVIMAVMKIAKRILSGYWSDYTNLGTKFHENLSGLSILKAYNQDKYKQEEIVS
                     DAERFRKATMSLLSMQLNSITIMDIISYSGAALGIGMSLIMFTNGNISMTGMLMFLLL
                     SAEFFIPMRQLGSLFHVAMNGISACSKLFAYLELKEQVYGSEELAKPLEKMEVRHLTY
                     TYEEGKAKALQDISVNFNKGSFSALVGKSGSGKSTFVRVLLNQLPGYQGEIVWNDVPL
                     ASLSGETIRKQAVLVDNHGYLYANRIRENLLIGNPAANDSDLWNVLEQVSLADFVRKL
                     PEQLNENLEENGSNLSGGQRQRLLLARALLCQAEVYVFDEITSGVDLESEKIILLVLQ
                     KLAKEKIVLFISHRLYNVLDADQVLVFDAGKLLEVASPERLQQESNYFKNYFLEEEAL
                     LKGGA"
     gene            6713..8359
                     /locus_tag="U0290_002271"
     CDS             6713..8359
                     /locus_tag="U0290_002271"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302308.1"
                     /translation="MSEWTIIGWLLKFVKPLRGKMVLAILLGIISNLSVIMISLIGTY
                     GIITVILQQHLNPYKWLFVMVACGVVRGLARYSEQYLNHDIAFRLLAIIRERIFATLR
                     KLGPARLSGKKSGDLVAAITTDVEALEVFFAHTISPVFIALGTTIVTVGFLASYDVGL
                     ALILLLGQILVGVVLPVISYKRNKKIGTAYQQEFVGLNQMVMESIASLQDIFQFKLGE
                     ERLSKLETQGEKLNKQYKKRIKQGSELQIFGEWVLIGTATLILVLGSLWQLPLETVLI
                     GTVLSLSSFGSVLALNALGTALLTTFASGKRLYTLTEEKPVVLFNGQLELSDFESVEL
                     DKVSFSHDGKQPLLNEISLALPKRKWLGIGGESGSGKSTLVKLLMRYWDPKGRIKLND
                     NALPEITESSLHRLEGVMEQSTFLFEDTLGNNIRLGKKDATLEEVKEAARKAAIDTWI
                     ETLPEGYDTIIGGQSRNLSDGERQRIGLARLFLHDAPLLLLDEPTSNLDYINEQAILN
                     TLRSEIQDKTVLVISHRATTLDLAEEQLFIENGALKRAAK"
     gene            complement(8396..8704)
                     /locus_tag="U0290_002272"
     CDS             complement(8396..8704)
                     /locus_tag="U0290_002272"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM2302309.1"
                     /translation="MYLKEKKNYLYCTAVIQTTGKVSYEQLVEHLEALRAKTVKEPGC
                     VLFEIVPLESALGRFALWEIWQNQEAFYYHHEQNYTKEFFAAELDTVEFFESSEKVNL
                     "
     gene            8772..9118
                     /locus_tag="U0290_002273"
                     /pseudo
     CDS             8772..9118
                     /locus_tag="U0290_002273"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464659.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
     gene            9143..10282
                     /locus_tag="U0290_002274"
     CDS             9143..10282
                     /locus_tag="U0290_002274"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014654245.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="immunity 26/phosphotriesterase HocA family
                     protein"
                     /protein_id="HEM2302310.1"
                     /translation="MINNEIREVIGLHQINENDQKLTVENAEVIIRNHVLIKLILNQA
                     DCYKEIDYNLELTDTNELVGRKNAKPKALTTKTILKAKTKELRLKINKISHRIELKLG
                     VQHFENIYFEEGMLFTKENVQEKIAANYGSDWLSILDKAKLKVKTRQTIQQGSIFSYP
                     IGNEYGFGLVIGCFQAFRKQKIMPQDSSHYLRLMMGVPLVIRSFNYTSKQNTVDLSLL
                     KKQELLNPEFIMDDLVSRGDFPIIGRVDLEEADISFPMNFSFNGVSTTYAGYQAIGEP
                     DRDIIKKYEEEITVRFDWGFGSKTMPAKEFLKRSSGKESFLPYSGLGMTPIAGYSKKL
                     VSPKSIFSEEELKQIYAVLDINGEMSFDDFNENYNGLTAQNILSI"
     gene            10402..10872
                     /locus_tag="U0290_002275"
     CDS             10402..10872
                     /locus_tag="U0290_002275"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724679.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302311.1"
                     /translation="MEITLQQPTSADFSFIEWLWGDLATTEVLGGPFSFPEEMRMDWL
                     KSKSQASNAYFIIKKGIESVGEVSFRDFEKGTAHLNIKVAACYRGQRIAQKALQLFLD
                     FFQTDCGGIVMLDEVRRKNEAGIGFLVKAGFEVIEEKEWTMVLKWSAQAEGGFE"
     gene            10869..11159
                     /locus_tag="U0290_002276"
     CDS             10869..11159
                     /locus_tag="U0290_002276"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302312.1"
                     /translation="MSKERCACCNCLTIDVRGEFEICPICFWEDEGYFVFDKEEIYSH
                     YQDIFSIEDLLNIRSSANNGLTLLDARQNFKLFGACELAMKKYVREPNAEEL"
BASE COUNT         3567 a         1616 c         2360 g         3650 t
ORIGIN      
        1 agaaggtatt gatatttatt acctgtttct tcatagctta gaaaaagtga aaataaccaa
       61 tttcttattt tcaaattatg aaaaagattt gttagccaat ataactcctg caaagaattt
      121 gaccgaccaa atttctaaca gcttacttat tcatgcgaga ggtttaagta aatatttcca
      181 tgaattgtta tctggtcaaa agactgggta aaggagttta aagagaataa gttttataat
      241 gagccgagag ctattaacaa agacgagtat tcagcctacc aaactattat aaaaaatatc
      301 aatggcaaaa aaattgaagg atttcaaaat gaaatatgaa gctgttttta taaatagatt
      361 caaatcatta atagaagaat tccagttaaa ttataaagtt atatctgaag aggagctagc
      421 actttttggt tcaaattttg cgcttgtttt tttgattcat tttgatgaag tttctttgaa
      481 ttatgtatgc cgtgataaag ataattcgct tgtcagttat gatgtatggt cttatttttt
      541 gcatgtcttt gatgataaag ataggaataa tttgccaaaa tataattcag tgcaggaacg
      601 ggttgatatt tcgtttttaa tacttgcaag aggtcttccg cgtcattgga gtagtgtgct
      661 taatggagat gacaagtggt tggaagatta tgagcgatat gaattagcca gtgttcctag
      721 agaagtaatc ggggacttaa aggatagttt gagtttatat atttaaccaa gaaatgttga
      781 gaatgtaaca gcaaagagga gttcaaccat gaaaatagac ggtaactcaa aagaaagaat
      841 ccttaaaaaa gtaaatttct actccataat aattttaaat taatcgaaat aaaaataacg
      901 gatgtcacaa cttattaatt agaaaagttc cctaaaatct ctttttattt cacaaataat
      961 aatgtactat gaaaacatgg gagattcaaa tacgagagga gaaaagaaaa tcaatcatac
     1021 acaaaagggt aaaattgatt tcactttctt tgtgtttatg cttttaacct ttaataattc
     1081 aaaaaacatc aagggatttt tgtatttaga acaacaacgt acaaacagca gtgtaatcca
     1141 gcacaataat tttaaaggag cgtaacttta tgaacgaatt tccagttgta tttgaaccag
     1201 agtttatgac aatttattta cttgttatca tcagtatatt ttctacaaca ctggctttat
     1261 cgcttgaaaa atataagttt actatagcgg ggaaagcgtt gattgggatg tgctttatat
     1321 ccctgttcgt attatttgtt tatatatggg tgggggggat ttcttcagaa acaaacgaat
     1381 taatcatgag ccctattggg attctcagtg tattgctctt tactacacat ccatatattt
     1441 tcttaatact tgcaatcttg ctcggcgggg aaaagaaacc gccacatgtg cccaaaccta
     1501 aaaaataaat aggaagttga aaaatatgat acttataaat aaacgagcgg aaaaactaga
     1561 ttaccagaca attttagcga tttgggaaaa gtcagttatt gcaacgcatg attttttagc
     1621 tgcggaagat aggcagtttt acaaagaaca aattcctttg tttctagata atgtggaact
     1681 gttcttatgg ttcgctggtg aagaggttgt tggttttagt gggacgagcg agcgggaact
     1741 agatatgttg tttttagagc cgatagctac gggtaatggt tatgggagtc aaattcttag
     1801 ttggctaata gaaaataagc agataaattt ggtggatgtg aatgaacaaa atgaaaatgc
     1861 cacgagattt tatttgaagc atggatttgt ggtttcttct agaagtgacg cggacggttt
     1921 tgggaagcct tatccaattc ttcatttgca actgaaggga gagagttaat ggagtatgaa
     1981 cagctgttac aaagcgaact tggtgaactt gaaataattc gggaagaact acaaaacaaa
     2041 gaatatcgag gaatgattgt aaaaacggct aaagatggga caatgactcg tacgcgtttg
     2101 gcgaagaaaa cggataaaaa ggcagggtac tttgttgctt tttgggagaa agatgaattt
     2161 ggtaagaatt gtccttttga tgagaatgat agcgctgatt ttttatgtat tgttgttatt
     2221 gatgatgatt tgaacggtat atttgttttt ccaaggcagt gtttaattga aaagggaatt
     2281 ttaactagtg aagctggtat tggaaaaatg gctgctagat tttatccaac gtggtgtcag
     2341 gatttaaata aaacagcgag aaaaacgcaa gcttggcaac aggcgtattt taaaaattat
     2401 tctataagaa aagaagacca ttaattgggt cttcttttta ttgtttagaa aatacttgct
     2461 cgcagtaatc taagtaagca tcgtctacta gaaaatattt tggaaccatt aagccaacaa
     2521 tatggatgag tagctctgaa ttagcgatgg caggattaat catttgatgc gagacatttg
     2581 ggacggtttt ggtttctagg ttttcttttt taatttgttg ggtgtaaaca tcttttgttt
     2641 ctgctgaatc aacattttta tctttttcag ctaagacgag gtagattttt gcttttactt
     2701 ttgaaaggtc tagggtggca tcttggttca tgtttttgcg gataaagttg tagcgatctg
     2761 gggtcatttt ttctttaccg ccattttgtt tgtagctttc gtaggttttg tttttagaaa
     2821 taagggcgct gtcggtgagg aaattttgtt gtgcttgctt gacttctttc gttgttttac
     2881 cagcgtcttt cgcttgccag ccggtgttat attctccttg tcgcatccag ttgatagcag
     2941 gggcggcaag gattgagaaa gcaatctcat tatttgcatt cattgctttt gggatcaccc
     3001 agccggcttg actagcgccc cataagccga ttttggtggt gctatcagga tacttcactt
     3061 tcatccactc aataacttgg ttgacttcgt ttgcgcggtc ttccatggac tgatttagcc
     3121 aattgcctga ggagttacca acgcctaatt tatcccaaga aacagatata tatccttgtt
     3181 tggcaaagcg ttccattagc ggtctatagc taccgttttg agttgcttct tgtgccccgt
     3241 caccatgaac aaacacaata atgccttttg gtttctcgtg ttttggagtt gtcacgaccg
     3301 cagaaagtct tccaccagta gttgggattg tgactcttgt ttcgttcatt tcgaaattgt
     3361 ttccgatgaa aagaatcgcc actaatatga cgatgattgc gctcaatacg atagttattt
     3421 ttttccaacg tttcattata tccactccat tttttgccat tctttgatac cggtgagtac
     3481 tcccatcaat gtgctatttt ctttttgaat cacttggaag cctaaatttc tatacagctt
     3541 gtaggcacga ttattgttct tggcaacgta tagagtaatc ttttcatcat gaaaggtttc
     3601 taggcaatga gaaattagcg tttttccaat accttgacca cgaaaatttg gcgaaacggt
     3661 tataaagtca atatatcgtt cattttgaac aggtttgtgt gatagaagac tgagtaagaa
     3721 aattaatttg aggcactgtg aaaatggtaa aaattttctt aggttttgat atagcttttg
     3781 atgtgagtca ctcttgcccg ttacaaacat gcaaccgcaa actagctcat cttgtattgc
     3841 aattagtagg ttttcgcctt tttctgtata aatgtaatgg caaaaagcat atataatgtc
     3901 atgtgcttct gtttctttgt atagcatttt tgtgaacttt gatttgaacc ctgcgaaaac
     3961 taaagacgct atttcttcaa tgatgcaatc tttttcaaat gaatcgatgc tttcaatgga
     4021 aagtgtcata atggcacttc cattgtgtaa accattgcgt ccggataggc gagtgaaggg
     4081 tagatgtttt cgtataaaat tatgcttgtt gttggatgtt ttaattcttc taaaaatagt
     4141 tggatttgcg cttcaacagt tgcttcatct ttggcaataa aagatttaca agcatattcg
     4201 ccagctggaa aagtataatc acttcttttt ttaatggttt taaggcagat tgctccagtg
     4261 tcttgtttgg agaaaatgta aaaaggttcc tctaaatctg gtaaattgtg ttttgcagct
     4321 tgggagtagt tgatagtgtt atgatcaatt atttggttag gaactttttt aaaataacga
     4381 ttgtctttag ctacaaaagt gatttcattt aaacgcattt ctttttgcga atggatgatt
     4441 ttttgaatcg ttttctgaat tcctactaac tcttctattt tttgttgcaa atcttgttca
     4501 gcctgctcta acatgggagt cactttttca ccaagcaaac tttctttgat ttcttgaata
     4561 gaaaagccaa tttttctaaa aagaataatt tgatataaac ggtaaatatc cgtttcttca
     4621 aaataataat agccattttc aggatttctt ttaggaacta gaataccttc atcaatataa
     4681 tgacggattt tatatttaga tatttgaaaa agttgcgcga tttcgccact ggaaagagta
     4741 tgcatctgaa aacctccttg tgatttagtt ttagtataaa ctatgtggtt accacgcggt
     4801 caaataaaaa aaataaatga caatgagaat cattatcaaa cgttgatttt tgtgatataa
     4861 taaacaaaga tttattaatg ggggttagca agcaaatggg aaaagtagta ttgaaaatgg
     4921 cttatactgc cgaaaaatca aagaaaatat taaggtatct tgaaacgaac cttaatgtaa
     4981 ctcgggggaa gtacaatgat tgataagcgt ttgtttcaac tggttgaaaa gaaatcttta
     5041 gtgttattaa ttctttttcg tgtgcttagt ttagggctga tgattggtct ttggtttgtt
     5101 tttgctcaac aattaacgta ttatttagag ggccaaagtg tcgattggtt atggcttatt
     5161 ggaacggttt tagttgtttt agttggtaaa gcgatactta ccaaattagc ggagaaacaa
     5221 atttaccaag catcggcgga attgcgttta tcaatgaggc gcgctgtgat ggaaaaagct
     5281 tttcggttag gcaacaacga aggacagcta ccggcatcaa ctttaacgca gctcgcggta
     5341 gatgggattg aacaattaga aatttattat tcacgttttt taccgcaatt attttattgt
     5401 ctcatcgctt ctttgatgat ttttggaagt ttagttggat ttgcttggca gccggcgatt
     5461 gtgctattaa tttgtatgcc gatgattccg atagttatta tggcagtgat gaaaattgct
     5521 aaacggattt tgagtggtta ttggtcggat tatacgaatt taggaaccaa atttcatgaa
     5581 aatttaagtg gcttgagtat tttgaaggct tataaccaag ataaatataa gcaagaggaa
     5641 attgtttctg atgcggaacg tttccgtaaa gctacgatga gtttgttatc gatgcaactg
     5701 aattcgatta cgattatgga tattatttcg tatagtgggg cggcacttgg tattggtatg
     5761 tcgttaatta tgttcacaaa tgggaatata agcatgactg gtatgttgat gttcttacta
     5821 ctaagcgccg aattctttat tccaatgcgt caactcggat ctttattcca tgtggcgatg
     5881 aatggaatta gtgcttgcag taaattgttc gcttatttag agttaaaaga gcaagtttat
     5941 ggctcagaag aactagctaa accgttagaa aaaatggaag ttcgtcattt gacatataca
     6001 tatgaagagg gtaaagctaa agcactgcaa gatatatcag taaatttcaa taaaggaagt
     6061 ttttcagcac ttgtcggaaa gtctggttca ggaaaaagta catttgtccg agtattatta
     6121 aatcaattac ctggttatca aggggaaatt gtttggaatg atgtaccttt agctagtttg
     6181 agcggggaaa ctattcgtaa acaagctgtg ttagtagata atcatggtta tctttatgca
     6241 aatagaattc gggaaaattt attaattggt aatccagctg ctaatgatag cgatttatgg
     6301 aatgttttgg agcaggttag tttggctgat tttgttcgga agttacccga gcaattaaat
     6361 gagaatttag aagagaatgg aagtaattta tctggtgggc aaagacagcg attgttactg
     6421 gcgagagcat tgctatgtca agcggaagtc tatgttttcg atgaaattac gtctggtgtg
     6481 gatttggaaa gtgaaaaaat tattcttttg gtgttgcaga aattagctaa agaaaaaatc
     6541 gtgctcttta tttcgcatcg cttatataat gttttggatg cggatcaggt actcgttttt
     6601 gatgcgggga aattgctgga agtggcgagc ccagaacgat tacagcaaga atctaattac
     6661 ttcaaaaact actttttaga agaagaagca ttgctgaaag ggggagcatg acatgtcaga
     6721 atggacaatt attggctggt tgttaaagtt tgttaagcca ttacgaggaa agatggtttt
     6781 ggcgatttta cttggtatta ttagtaattt atcggttatc atgatttctt taatcggtac
     6841 gtatggcatt atcacggtaa ttttacagca gcatctgaat ccttataaat ggctctttgt
     6901 aatggttgct tgtggggtgg ttcgcggttt ggcacgatat tcggaacagt atttaaatca
     6961 tgatattgcc tttcgtttgc ttgcaattat tcgtgaacgt atttttgcga ctttgcggaa
     7021 actaggacct gctcgtttat ctggaaagaa aagtggtgat ttagttgctg cgattacaac
     7081 agatgtcgag gccttggaag tgtttttcgc gcatactatt tcaccagttt ttatagcact
     7141 aggtacgacg attgtaactg ttggcttttt ggcaagctat gatgttggtt tagcgctgat
     7201 acttttgtta ggacaaatct tggttggtgt cgttttgcca gtgattagtt ataaacgaaa
     7261 taaaaaaatc ggaacggctt atcaacaaga attcgttggg ctcaatcaaa tggtaatgga
     7321 aagcattgca agtttacaag atatattcca gtttaaattg ggcgaagagc gtttgagtaa
     7381 attagaaaca caaggtgaaa agctcaataa gcagtataaa aaaagaataa aacaaggaag
     7441 cgaactccaa atatttggtg aatgggtgct aattggtacg gcgactttaa ttttagtgct
     7501 aggtagtctt tggcaattac cgcttgaaac agtattaatt ggaactgtgc ttagtctgag
     7561 ctcttttgga tcggtattgg cattaaatgc tttaggaaca gcgctgttaa ctacttttgc
     7621 tagtggtaag cgattatata cattaacaga agaaaaacct gtggtattat ttaacggcca
     7681 gcttgaacta tcggattttg aaagcgtgga gttagataaa gtgagtttta gtcatgatgg
     7741 aaaacaacca cttttaaacg aaatttcgct agcgcttcct aagaggaaat ggctcggcat
     7801 cggtggggaa agtggcagcg ggaaaagtac cctagtaaaa ctactgatgc gttactggga
     7861 tccaaaaggt cggattaaat taaatgataa cgcactccct gaaattacag agtcttcgct
     7921 tcatcgacta gaaggtgtaa tggagcaaag tacattcttg tttgaagata cacttggtaa
     7981 taatattcgt ttaggaaaaa aagatgctac tttggaagaa gttaaagagg ccgcccgaaa
     8041 agctgctatc gatacatgga ttgagacttt gccagaagga tatgacacga ttattggcgg
     8101 gcaatcacga aatttatcag acggcgaacg ccagcgaatt ggcttagcta gactatttct
     8161 ccatgatgcc ccgttgttat tattagatga accaacaagc aatttggatt acattaatga
     8221 acaagcgatt ttaaacacgc tccgttcaga aattcaagat aaaacggtgc tcgtaatttc
     8281 tcaccgagca acaacattag acttggcaga agaacaatta tttatagaaa atggtgcatt
     8341 gaaacgtgca gcaaaataat aaaaacagct tgtataaatt acaagctgtt tttatttata
     8401 aatttacctt ctctgagctt tcgaaaaatt caaccgtgtc aagttccgct gcaaaaaatt
     8461 ctttcgtata gttctgttcg tgatgataat aaaaggcttc ctgattctgc caaatttccc
     8521 acaaagcaaa tctgccgagt gcactttcta aaggaacaat ctcaaataaa acacatcctg
     8581 gttctttcac tgttttagcg cgtaacgcct ccaaatgttc gaccagctgt tcataagaaa
     8641 cttttccggt agtttgaata actgctgtgc aatataaata attctttttt tcttttaaat
     8701 acatttcttc tcctcctttg actatgttaa gcttaaggta tggagtatac ccgatagcaa
     8761 ggaggaacta gatgtatatt aaagattttg ccattaaaac ggggctttcg attgatacgc
     8821 ttcgatatta cgaggaagaa gaattattaa ttcctgctag aaatgaaaaa aattatcgtg
     8881 tttatacgga agaagattat tgctgggtac agcttttact aaaatgaagc aaacagggat
     8941 gacaataaca aacattaaaa attttgctgc attacaaaag caaggagaca tgacacttcc
     9001 aaatcggata gaaattttaa ataatcatat gaaaaacttg tacgagcaac agaaagattt
     9061 ggcagaaaca atttcctttg tggctaaaaa agtggatgga tatcgagaga agttataaat
     9121 acaacaggaa aggcgagtag agatgattaa taatgagata cgagaagtga tcggattaca
     9181 tcaaattaat gaaaatgatc agaaattgac tgtggaaaat gcagaagtaa tcatcagaaa
     9241 tcatgtgctg ataaaattga ttcttaatca agctgattgc tacaaagaaa tcgattataa
     9301 tctagagctt acagatacaa atgaattagt tggccgaaaa aatgcaaaac caaaagcatt
     9361 gacgacaaaa acaattttaa aagctaaaac caaagaatta aggttgaaaa taaataaaat
     9421 cagtcatcga atagagttaa aactaggtgt tcagcatttt gaaaatatct attttgagga
     9481 agggatgctt ttcacgaaag aaaatgtaca agaaaaaatt gctgcaaatt atggaagtga
     9541 ttggttgagc atattagata aagcaaagct caaagtgaaa acgagacaaa ccattcagca
     9601 aggttccatt ttttcttatc caattggaaa tgaatatggt tttgggcttg tgattggttg
     9661 ttttcaggcg tttcggaaac aaaaaataat gcctcaagat agctcgcatt acctccgatt
     9721 gatgatggga gttccgcttg ttattcgtag ctttaactat acaagtaaac aaaatacagt
     9781 tgatttatca cttttgaaaa aacaggagct cttaaatccg gaatttatta tggatgattt
     9841 agtgtcgcgt ggggattttc cgattattgg tagggtagat ttggaagaag cggatatttc
     9901 ctttccaatg aatttttctt ttaatggagt gtctacaacg tatgccggtt atcaagcaat
     9961 aggtgaacca gatagggata ttattaaaaa gtacgaggag gaaattaccg ttagatttga
    10021 ttggggattt ggaagcaaaa cgatgcctgc gaaagaattt ttgaagagaa gtagtgggaa
    10081 agagtcattt ctaccttatt ctggattagg aatgacccca attgctggat attcgaaaaa
    10141 gttagtttct cctaaatcca tcttttcaga agaggaacta aagcaaattt atgcggtttt
    10201 agatataaac ggggaaatgt cgtttgatga ttttaatgaa aattataacg gccttaccgc
    10261 tcaaaatatt ttatcgattt gatggcttta gtggtactaa ttaaaaactt tcccaatttg
    10321 caccaaatga taacattgta aaatgcaatc atcaagttca ttagtgaact tttaactacc
    10381 aagtaaacaa ggaggaattt catggaaatc actttacaac aacctacctc agctgacttt
    10441 tccttcattg aatggttatg gggagatttg gcaacgacag aagtactcgg tgggccattt
    10501 tcttttcctg aagaaatgcg aatggactgg ctcaagtcaa aatctcaagc gagcaatgct
    10561 tattttatta taaaaaaagg tatagaatct gttggtgaag ttagctttcg tgattttgaa
    10621 aaagggacag ctcatttaaa tattaaagtg gctgcatgtt accggggcca gcgaatcgct
    10681 caaaaagctt tgcaattatt cttggatttt tttcaaactg attgcggtgg aatagttatg
    10741 ttggatgaag ttagacggaa aaatgaagca ggcattgggt ttctcgtgaa agctggtttc
    10801 gaagttatag aagaaaaaga atggacgatg gtgctcaaat ggagtgctca agcagaagga
    10861 ggttttgaat gagtaaagaa agatgtgcat gttgtaactg tttaacaatt gatgttagag
    10921 gcgagtttga gatttgtccg atatgtttct gggaagatga aggttatttt gtctttgata
    10981 aggaagagat ttattctcac tatcaagata ttttctcgat agaagatttg ttaaatattc
    11041 gctctagtgc taacaatggt ttaacgttat tagacgcacg acaaaatttc aaactgtttg
    11101 gtgcttgtga gttggcaatg aaaaaatatg taagagagcc aaatgcagag gaattataaa
    11161 aaatgagcaa gtaagttaga tttaaaagcc taa
//
LOCUS       DASDYO010000105        11068 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.105, whole genome shotgun sequence.
ACCESSION   DASDYO010000105 DASDYO010000000
VERSION     DASDYO010000105.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 11068)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 11068)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..11068
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.105"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            6..365
                     /locus_tag="U0290_002277"
     CDS             6..365
                     /locus_tag="U0290_002277"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464218.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator"
                     /protein_id="HEM2302313.1"
                     /translation="MLKLLIVDDAMFMRTMIKNIVKDSDFEVVAEAENGLEAVKKYDE
                     VKPDIVTLDITMPEMDGLEALAQIMAKDPSAKVIMCSAMGQQGMVVDAIKKGAKDFIV
                     KPFQADRVLEALEKAAK"
     gene            385..2241
                     /locus_tag="U0290_002278"
     CDS             385..2241
                     /locus_tag="U0290_002278"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464219.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="chemotaxis protein CheA"
                     /protein_id="HEM2302314.1"
                     /translation="MTTNMLDLFIEEASEHLQALNDNLLQLEKDPTNGQLVSEIFRSA
                     HTFKGMSATMGFQQVADLTHAMENVLDEVRNNRLAVTEHLVDIIFTCTSHLETMVSDI
                     QHGGQGAADISKTVADLEALLHPEQETDLAVEKTYRIQIRIEEAAILKAVRAVMCLER
                     LAEMGIISETTPDREAIELEEFEQSFEVVLESAQTKEEIEAVVLDISEIEKVTVTEEV
                     EEVQVIEPIKKAAKQTTKRLENKTIRVQLEKIEKLMNVFEESVIERARIDEIAEKTNN
                     KELMEHLGRFSSISKEIQNGLLNMRMVPVDSVFNRFPKMVRTLAKELGKKIDLVIEGA
                     DTEVDKIVIDEIGDPLVHLIRNSVDHGAETVEVRRKNGKNETATINLKAFHSGNNVVI
                     EIADDGAGINKRKVLEKAIAKNVVTRAESTKMTDAEIFDLLFDSGFSTADQVSDLSGR
                     GVGLDVVRNTILKIGGKISVESSENAGSTFRIEIPLTLSIIQSMLVATSERRYAVPLA
                     NVAEAITINPADIQHVHGKDLINYRETIIEVLDLGECFHETPLNDTDELLLLVVKNAK
                     RTFGLIIKDIIGQREIVLKTLGGFFSESQIAFSGATILGDGRVVLILNLETF"
     gene            2254..2553
                     /locus_tag="U0290_002279"
     CDS             2254..2553
                     /locus_tag="U0290_002279"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEM2302315.1"
                     /translation="MEQVFQVELPEWEPKEPSQEGREKGSIRQVDNIGVNLIVRLGKK
                     EMPVGDIAELSIGDVLEVEKKPGHKVEIFLDEKKVGIGEAILMDENFGIVISEID"
     gene            2572..2982
                     /locus_tag="U0290_002280"
     CDS             2572..2982
                     /locus_tag="U0290_002280"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464221.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302316.1"
                     /translation="MKQEAYNAVKMKVDQEKTAILKELQLLLSKREKVVEKLAHEKEV
                     YYSRTKKERLQVAVLAGSMQLDAFSPSRIQQMEREIHQISQYIKSNEQILEQLEEKGK
                     QAKKMYDDTRKKWQQLENKREEQTLRDLKMVLLK"
     gene            2998..4044
                     /locus_tag="U0290_002281"
     CDS             2998..4044
                     /locus_tag="U0290_002281"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464222.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook-length control protein FliK"
                     /protein_id="HEM2302317.1"
                     /translation="MLIPDNLLQPLVGKKQVEPKESLAEELVELPFISLLMENSPAPL
                     LKGEADNGEQATLPLKEIAQPLVSAKLLDDAPETKLQVAPLELKEVKETLAAIAKQAI
                     DQPKIENAPQAVETPVTNTPKEPTKNASREQQPPPELIIPTKESPKLAENVAKNQPVL
                     AKLPQEKEVVQLFKASIKEPVTAKEEVAVKKPAESSNIWHDTAKQLTPAAKPEVPVTL
                     KQLDKTITDQIEQLQKFQVKQNKAFFAIQPESLGKVEVLLKKMPDKIFVHIEYQEQTA
                     KQKLEQMAQDLHNRFRDRGVEVAVTMTEKQAPKENNQGSDGRHQGESKKEKERENPHQ
                     ERAKQEAFDLEEET"
     gene            4046..4468
                     /gene="flgD"
                     /locus_tag="U0290_002282"
     CDS             4046..4468
                     /gene="flgD"
                     /locus_tag="U0290_002282"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464223.1"
                     /note="acts as a scaffold for the assembly of hook
                     proteins onto the flagellar basal body rod; Derived by
                     automated computational analysis using gene prediction
                     method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook assembly protein FlgD"
                     /protein_id="HEM2302318.1"
                     /translation="MDGISSLSGAGQDTNNVVTSSVSKTLGKDDFMKLFLTSLQYQDP
                     SSPLDTNEMMSQMAQLSLMEQVANMTTAVDKLSEQAQNSALQSAVNFIGKDIKGVSLN
                     GEVISGKVESVQQTTNGVMLKLKDNDSLVPMTYVTEIN"
     gene            4488..5723
                     /gene="flgE"
                     /locus_tag="U0290_002283"
     CDS             4488..5723
                     /gene="flgE"
                     /locus_tag="U0290_002283"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar hook protein FlgE"
                     /protein_id="HEM2302319.1"
                     /translation="MNQTMYTAISGMNAFQQALSVTSNNIANANTTGYKKQSVVFNDL
                     LYQNTMGSVAGGLYAGTNPMSFGSGSKIGAILTDYTAGSPTATGRNKDAALQGRGFFI
                     AGDNAGGNIVYTRDGSFAVSDNNYLTTQQGKYVMGYATDKNGNVLNGNLQPIQIPLNS
                     AIPGEATKNGSLSGNIPLDWGEKDTISSELSVYDNAGGKHKLQVNMKAATPDASGNVS
                     YEYEIQMDGKALTPPVTGTLNYNAQGELTNPDALKNIQINSTVNGKQVNMGLNLSGLT
                     NYGTNQVFSPTSDGKGAATVKDYAVTDSGYIAVSYSDGTVIPVAQLAVATFSNEDGLV
                     KMGNGEYVPGLSSGDAVYGVAGQNGAGGISGSSLEGSNVDLSREFVNLMTYQSGFQGN
                     TKVIRVADDVMKQIVNLIQ"
     gene            5737..5973
                     /locus_tag="U0290_002284"
     CDS             5737..5973
                     /locus_tag="U0290_002284"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliN"
                     /protein_id="HEM2302320.1"
                     /translation="MKINHTIPLRIDFELGRTKQPVGSLLDVKKGTVFRLEDSTANVV
                     KITISGKCIGYGEILTKDGKMFVKITKLGEGSSS"
     gene            5994..6986
                     /gene="fliM"
                     /locus_tag="U0290_002285"
     CDS             5994..6986
                     /gene="fliM"
                     /locus_tag="U0290_002285"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein FliM"
                     /protein_id="HEM2302321.1"
                     /translation="MSDKLSQEQIDALLSQISEGKVVDESTEIGDFGRFHPYDFHKPE
                     KFGAEHLESLKTIASAFTKKSMEFVSQRIRIPIHTEATLADQVSFASGYIETMPNDSY
                     IFCIIDLGNPELGQIIIELDLAYIIYIHECLSGGNPKRKLSERRLLSVFEELTLKSIL
                     EKFCEALKDSFKSVHPISPEIVNIETNPALLRVTSPNDMMALVSVDIKSEFWISTMRI
                     GVPFFSVEEIMNKLENVVEYTFDKRRNFDAEVEQELHQVEKEACIRVGEIKTTWKELN
                     KLEVGDVLLTETHIRDTLKGYVTEKWKFECYMGKSGNQKAVKFMRHTGRTEQER"
     gene            6989..8536
                     /locus_tag="U0290_002286"
     CDS             6989..8536
                     /locus_tag="U0290_002286"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464227.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flagellar motor switch protein"
                     /protein_id="HEM2302322.1"
                     /translation="MEQLLEKNITQMELDVIGEIANISFGSASTVLSDLLHQQVTIST
                     PKVEIVDLYNTKDIDIPHVVLEVNFHKGIEMRNLFVLQSEVAAAIADLMMMGDGNIDP
                     NEELSELHLSAVQEAMNQMMGHSATAMSNMFGEMIDITTPDIKVIALKEQLEDTNDQT
                     MIKVGFDLIIGDLITSNLMQLIPIDKGHELAKRLLGDAVPEPEPVKEEISLTAEELDV
                     FLEVCNIGIGSASTVLSKLLNRKVSLQIPTARVIDSKEFEFNERPCLVTSVEFVEGLR
                     SSNTFIISKNAALIMADLMMMGDGLVQEDAELTELEVSAVQELMNQMMGFSATAMSEM
                     LGTKIDISPPTMEFCNFGDTMIQKNIEEGKTVEVIFPLEVEGLLKTPMYQIFNPAAAK
                     EMAQLMLGIQAKEVAEKEATTPAEIIEPEKLAEPVHQAVIEEKETLSEMEQILEDIPV
                     TLEVVFGTAKVKLEKFISWCEKDVIILKESMNEPLVLALNGVTIGKGILVRVDDHFGI
                     QMTELVR"
     gene            8542..9945
                     /locus_tag="U0290_002287"
     CDS             8542..9945
                     /locus_tag="U0290_002287"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302323.1"
                     /translation="MRKLGLMTILFWLCFSVQAFAADPEPPIISLEGEQHVFTSGEVI
                     SFHIENAADLKIILVNEHGQRKLLDEETYTVTDWDLDGSYQAEFYQADVPKPFVTVED
                     LFEVKQLEDVAKDETAPSLKTIEITHDEDVLLTSVLRVSADLDDAESGVKQATLVVHS
                     ESNESEIELIRNNYTGKFAAEIPLEKFQLGEKITFQLQLVDFAENEITVDLGNTVQLY
                     QPKAPLLSYDGNDITNVQKKIGQVGKQIELTLDKYTTEFPELETETGKIIPLKWQKTA
                     TEWKGSLTLPSELSGEIIHIQGMDQHLLVRATSEPFGEVQLVNNAILTGTILSDFTLI
                     SNLYIEVNGQKFSVERAGNRFTSAEITTTGKIVLHWTDWDGQIYSKQMNQEIKPVIAI
                     PGKEIIAPPPVIPNEKTQILTSPAPKPSVEAHENTPKKQVKKETSTKDNSSSIPFWIP
                     ALMIIGVIIFSGNRAMK"
     gene            9968..>11068
                     /locus_tag="U0290_002288"
     CDS             9968..>11068
                     /locus_tag="U0290_002288"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302324.1"
                     /translation="MKIDGIQESAENRNQLERELIKQNPVVKEGTIKAQMNTEVAVPK
                     TPPVSFSFKELSSLQLNGTSAASLELYMKLMMNNAKKANDLIFYVMRAGIKNPTDSTK
                     WQTVRSEISSQLSTILMKQHNFEAYFSENPANQKLFLANQKIMNEISFLLKMLPTLTF
                     ETTGKYDFLRMMQIASGNMETGIQMMREFQGHIEHATRLDPIVDARQETNWMIKVLRE
                     FGNMFQSRHLLPYELQAENINIWKLGSEYLKLMNQLLPQIGAFPNGNIKIFHQQATKP
                     LTELFQELQRLADGQMTQGGIAVILDRMQGQLTRLAQLFQKMEIEAGFTDTERILGSV
                     DAEFASDMTKMMLLAQQEMSFFDLLVKDFRSVS"
BASE COUNT         3930 a         2110 c         2411 g         2617 t
ORIGIN      
        1 attttatgtt gaagttgttg attgtcgacg atgcaatgtt catgcgtacg atgattaaga
       61 atatcgtgaa agatagcgat tttgaagtag ttgcagaagc agaaaatgga ctggaagcag
      121 tgaaaaagta tgatgaagta aaaccggata tcgtgacact ggatattacg atgccagaaa
      181 tggatggctt agaagcactt gcgcaaatta tggccaaaga tccatcggcg aaagtaatta
      241 tgtgctcggc gatgggccaa caaggtatgg ttgtagacgc cattaaaaaa ggtgccaaag
      301 actttatcgt aaaacctttc caagcggacc gggttttaga ggcgttagaa aaagcagcta
      361 agtagagaaa tggaggtgga tagcatgact acaaatatgt tagacctgtt tatagaagaa
      421 gcttcagaac atttacaggc gctaaatgat aatctgttac agcttgagaa agacccgacg
      481 aacggtcagt tagtaagtga aattttccgt tcagcacata catttaaagg gatgtccgca
      541 acgatgggct tccaacaggt ggctgattta acgcatgcaa tggaaaatgt actagatgag
      601 gtacgcaata atcgattggc tgtaacagaa catttggtag acattatttt tacatgtaca
      661 tctcatttgg aaacaatggt ttcggatatc cagcacggcg gacaaggcgc ggcggatatt
      721 tcgaaaaccg tagctgactt agaggcgctt ttacatccag aacaagaaac agatttagcg
      781 gtagaaaaaa cgtatcgcat tcagattcga attgaagaag cagctatttt gaaagcagta
      841 cgggcggtaa tgtgtttaga gcgacttgca gaaatgggga ttatttcaga aacaacgcca
      901 gacagagaag cgattgagct agaagagttt gagcagtcat tcgaagtagt cctagagtcg
      961 gcgcaaacaa aagaagaaat cgaagcggtt gttctagata tttctgaaat cgaaaaagtg
     1021 actgtgacag aagaagtgga agaagttcag gttattgaac caatcaaaaa agccgcaaaa
     1081 caaacaacca aacgattaga aaataaaacc attcgtgtac aacttgaaaa aatcgaaaag
     1141 ctaatgaacg tttttgaaga aagcgtcatt gaacgggcga gaattgatga aatcgcagaa
     1201 aaaacgaata acaaagaatt gatggaacac ttaggacgat tcagttccat ctccaaagaa
     1261 attcaaaacg gcttactaaa tatgcgtatg gtgccagtgg atagtgtgtt caatcgcttt
     1321 ccaaaaatgg tgcgcacact agccaaagaa ttaggtaaga aaatcgactt agtgattgaa
     1381 ggcgcggata cggaagtcga caaaatcgtc attgatgaaa ttggcgaccc acttgttcac
     1441 ttaatccgta attcagtaga ccacggagct gaaacagtcg aagtaagacg taaaaatggg
     1501 aaaaatgaaa ccgccacaat taatctaaaa gctttccata gtgggaacaa tgtcgtgatc
     1561 gaaattgcgg atgacggtgc gggaatcaat aaacgcaaag tgttagaaaa agcgattgcg
     1621 aaaaatgtcg ttacaagagc agaatcaacc aaaatgacgg acgcggaaat ttttgattta
     1681 ttatttgatt cgggtttcag taccgcggat caagtatccg atctttctgg ccgaggcgtg
     1741 ggactagatg ttgtccgtaa tacgattctc aaaatcggcg gaaaaatcag cgtagaatca
     1801 agtgaaaacg ctggttcgac gttccgaatt gagattccgc tgacattatc gatcatccaa
     1861 tcgatgctcg ttgcaacatc agaacgtcgc tatgctgtac cgctggcaaa cgtggccgaa
     1921 gccatcacaa ttaatcctgc agacattcaa cacgttcacg gcaaagactt aatcaactac
     1981 cgtgaaacca ttatcgaagt actcgactta ggcgaatgct tccatgaaac acctttgaat
     2041 gacacggatg aattactatt actcgtcgtg aaaaatgcca agcgaacttt tggacttatt
     2101 attaaagata ttatcggtca acgggaaatc gttttaaaaa cacttggtgg ctttttcagc
     2161 gaaagtcaga ttgccttttc tggagcaacg attttaggcg atggtcgtgt cgtattaatt
     2221 ttaaatttag aaacatttta aggaggaacc atgatggaac aagtatttca agtagaactt
     2281 cctgaatggg aaccgaaaga accgagccaa gaaggacgcg aaaaaggctc tatccgccaa
     2341 gtagacaata ttggcgttaa cttaatcgtc cgccttggaa aaaaagaaat gccagtaggg
     2401 gatatcgccg agctaagcat tggcgatgtc ctcgaagtgg aaaagaaacc tggccacaaa
     2461 gtcgaaattt tcctcgatga aaagaaagtc ggcatcggtg aagctatttt gatggacgag
     2521 aacttcggaa tcgttatttc agaaatcgac taaagaaaga gggcaagtga tttgaagcaa
     2581 gaggcttaca acgcagtgaa gatgaaagtg gaccaagaga aaacggccat tttaaaggaa
     2641 ttgcaattat tactatccaa acgggaaaaa gtcgtagaaa aattagcgca cgaaaaagaa
     2701 gtctattact caagaacgaa aaaagaaaga ctccaagtgg cggtattagc cggaagcatg
     2761 caactagatg ccttctcgcc gagccgcatt caacaaatgg agcgagaaat tcaccaaatt
     2821 agccagtaca ttaaaagcaa tgaacaaatc ttagagcaac ttgaggaaaa agggaaacag
     2881 gccaaaaaaa tgtacgatga cacacgaaaa aaatggcaac agcttgaaaa taaaagagaa
     2941 gaacaaacat tacgcgattt aaaaatggtg ctattaaagt aaaagggagg aaaacgcatg
     3001 ctaatcccag ataatttgct acaaccactc gtcggaaaaa aacaggtcga accaaaagaa
     3061 tcgttagcag aagaattagt agaactgcct tttatttcac ttttaatgga aaatagccct
     3121 gcgccgctct taaagggaga agcggataac ggagaacaag ctacgctacc actaaaagaa
     3181 atcgcccaac cactcgtttc agccaagcta ctcgacgatg caccagaaac gaaactgcaa
     3241 gtagcaccac tcgaactcaa agaagtgaaa gaaacacttg cggcaatcgc caaacaagca
     3301 attgatcaac ccaaaataga aaacgccccg caagctgtag aaactccagt aacaaataca
     3361 ccgaaagaac ccacaaaaaa tgccagtagg gagcaacaac cgccaccaga acttatcata
     3421 cctacaaaag aatcacctaa actagcagaa aacgtggcca aaaaccaacc agtcctagcc
     3481 aaattacctc aagaaaaaga agtcgtgcaa cttttcaaag cgagcattaa agagccagta
     3541 actgccaagg aagaagttgc cgtcaaaaag cccgcagaat ccagcaatat ttggcatgat
     3601 acggcgaaac aactcacacc agctgccaaa cctgaagtcc cagtgacgtt aaaacaactt
     3661 gataaaacca tcaccgacca aatcgaacag ctacaaaaat tccaagtgaa acaaaataaa
     3721 gcctttttcg ccatccagcc ggagtcactc ggaaaagtcg aagttttact taaaaaaatg
     3781 cccgataaaa tatttgtaca tatcgaatat caggaacaaa cggcgaaaca aaaactcgaa
     3841 cagatggcgc aagatttgca taatcgtttc cgagatcgcg gcgtagaagt tgccgtgaca
     3901 atgacagaaa aacaagcacc gaaagagaat aaccaaggct cggatggtcg acaccaaggt
     3961 gaatctaaaa aagaaaaaga acgcgaaaat ccacatcagg aaagagctaa acaagaagca
     4021 tttgatttag aggaggagac gtaatttgga cggaattagt agtttatcag gagccggtca
     4081 ggatacaaat aatgtagtaa catccagcgt atccaaaacc cttggcaaag atgacttcat
     4141 gaaactattt ttaacaagtt tacaatacca agacccatcg agcccgcttg atacgaatga
     4201 aatgatgtcg caaatggcgc aactttcctt aatggaacaa gttgccaata tgaccactgc
     4261 cgtagataag ctttctgaac aagcgcaaaa ctccgccttg caatccgcgg ttaatttcat
     4321 cggtaaagat ataaaaggtg tttcgctgaa cggcgaagta attagtggaa aagtcgaaag
     4381 cgttcaacaa acgacaaacg gcgtcatgct gaaattaaaa gataacgata gcctcgtgcc
     4441 aatgacatat gtaacagaaa ttaattaaaa atttgggagt gtgaattatg aatcaaacta
     4501 tgtatacagc tatttctggg atgaatgcgt tccaacaagc attatcggta acatcaaata
     4561 atattgccaa tgccaacacg acaggataca aaaaacaaag cgtcgttttc aatgatttac
     4621 tttaccaaaa cacaatggga tctgttgcag gcggacttta tgctggaaca aacccaatga
     4681 gtttcggttc cggttcaaaa attggagcga ttttaaccga ttatacagcg ggttccccaa
     4741 cagcaacggg cagaaataaa gatgcagcac tacaaggtcg cggctttttc atcgcgggcg
     4801 ataatgcagg gggcaatatc gtttacacgc gtgacgggag cttcgccgtt tccgacaaca
     4861 attatttaac tacccaacaa gggaaatacg taatgggtta cgcaacagac aaaaatggca
     4921 acgttttaaa cggtaatttg caaccaattc aaatcccgct aaatagcgca attccaggag
     4981 aagcaacaaa aaacggtagc ttaagcggta acattccact agactggggc gaaaaagata
     5041 cgatttcttc cgagctttct gtatatgata atgctggcgg aaaacataaa cttcaagtga
     5101 atatgaaagc tgctacacca gatgcgagcg gtaatgtttc ctacgaatat gaaattcaaa
     5161 tggacggaaa agcattaact cctccagtaa caggaacact taattacaat gcgcagggcg
     5221 aattaacaaa cccagacgca cttaaaaata tccaaatcaa ttccacagta aacggcaaac
     5281 aagtcaatat gggcttaaac ctaagtggct taaccaacta cggaacaaac caagtattct
     5341 caccaacttc tgacggtaaa ggcgctgcga ctgtaaaaga ttatgcagtt accgattctg
     5401 gctatattgc agtgagttac tcagatggta cagttatccc agttgcccaa cttgcggtgg
     5461 ctactttctc caatgaagac ggcttagtca aaatggggaa cggcgaatat gttccaggat
     5521 tatcttctgg cgatgcagta tacggcgttg ctggccaaaa tggcgctggc ggaattagtg
     5581 gctcctcatt agaaggctca aacgtagact tgtcccgcga attcgttaac ttaatgacat
     5641 accaaagtgg tttccaaggg aatacaaaag ttattcgtgt ggcggatgac gtgatgaaac
     5701 aaattgtgaa cttgattcag tagggagttt agctaaatga aaattaatca tactattcca
     5761 ctcagaatcg acttcgagtt aggacgtacg aaacagccag tcggtagttt gctagatgta
     5821 aaaaaaggga ccgtttttcg gttagaagat tcaacagcca atgtggtcaa aattacgatt
     5881 tctggcaaat gcatcggtta cggtgagatt ttgacaaaag acggcaagat gtttgtcaaa
     5941 ataacgaaat taggagaggg aagttcttca tgagagctag ggagtgacaa aaaatgagcg
     6001 ataaattaag tcaagaacaa attgacgccc tgctttccca aataagtgaa ggtaaggtag
     6061 ttgatgaaag tacggaaatt ggcgactttg ggcgctttca tccctatgac tttcataaac
     6121 cagagaaatt tggtgcagaa cacctcgaaa gcttaaagac gattgcatcc gcttttacga
     6181 aaaaaagcat ggagtttgtt tcccagcgta tccggattcc aattcatacc gaagcaaccc
     6241 ttgcagatca agtttccttt gcgagtggtt atatcgaaac aatgccgaac gatagctaca
     6301 ttttctgcat tatcgacctg ggtaatccgg agctcggtca aattattatc gaactcgatt
     6361 tagcctatat catttatatt catgaatgct tatctggcgg gaatccaaaa cgaaaattga
     6421 gcgagcgcag acttttatct gtttttgaag agctgacgtt gaaatctatt ttagaaaaat
     6481 tctgcgaagc actcaaagac agttttaaat cagtacatcc aatctcacca gaaatcgtta
     6541 atatcgaaac taacccagca cttctacgtg tcacatcacc gaacgacatg atggcgcttg
     6601 tcagtgttga tattaaatca gagttttgga ttagtacaat gcgcattggc gtgccgtttt
     6661 tctcggtgga agagattatg aataagctgg aaaacgtcgt ggaatatacg tttgataagc
     6721 ggcggaattt tgatgcggaa gtcgagcaag aattgcatca agtcgagaaa gaagcgtgca
     6781 tacgtgtagg tgaaattaaa acaacgtgga aagaactgaa taagcttgaa gtaggcgacg
     6841 tgcttctgac agaaactcat atacgtgaca cactcaaagg ctacgtcact gaaaaatgga
     6901 aatttgaatg ttatatggga aaaagtggta accaaaaagc cgttaaattt atgcgtcata
     6961 cagggcggac agagcaggag aggtagaagt ggagcaatta ctagagaaaa atatcacgca
     7021 aatggaacta gatgtgatag gagaaatcgc caatatttcg tttggctcag cttctacggt
     7081 cttatctgat ttactacacc aacaagtcac catttcgacg ccaaaagttg agattgttga
     7141 tttatataat acgaaagaca ttgatattcc acatgtcgtg ttagaagtga attttcacaa
     7201 aggaatcgaa atgcggaatt tatttgttct gcaatcagaa gtggctgcgg ctatcgcgga
     7261 cttaatgatg atgggtgatg gaaacattga tccgaatgaa gaactttcag aacttcatct
     7321 aagcgccgta caagaagcga tgaaccaaat gatgggacat tccgccactg cgatgagcaa
     7381 tatgtttggc gaaatgattg atattacgac accagacatt aaagtaatcg cgctaaaaga
     7441 acaattagaa gatacgaacg accaaacaat gataaaagtc ggctttgact taattatcgg
     7501 cgacttgatc acatcgaatt taatgcaact catccctatt gataaagggc atgaacttgc
     7561 aaaaagatta cttggcgacg cagttccaga gccagaacca gtaaaagaag aaatcagctt
     7621 aacggccgaa gagttagatg tctttttaga agtatgtaat atcggcatcg gttcagcttc
     7681 aaccgttcta tccaaattgc ttaaccgtaa agtttcctta caaatcccaa ctgcacgcgt
     7741 aattgatagc aaagagttcg agtttaatga acgtccttgc ttagtgacga gtgtggaatt
     7801 tgtcgaaggg ctgcgctcaa gcaacacatt tatcattagc aaaaatgccg cgctaattat
     7861 ggcagattta atgatgatgg gagacggttt ggttcaagaa gatgcagaac tgacggaact
     7921 tgaagtcagc gcagtgcaag aattaatgaa ccagatgatg ggcttctcag cgacagcaat
     7981 gtcagaaatg ctcggaacaa aaatcgatat tagcccacct acaatggaat tttgtaattt
     8041 cggcgatacg atgattcaaa aaaacattga agaaggaaaa actgtcgaag tcatcttccc
     8101 gctagaagta gaaggactat taaaaacgcc aatgtaccaa atttttaatc cagcagcagc
     8161 aaaagaaatg gcgcaattga tgcttgggat tcaggcgaaa gaagtcgcag agaaagaagc
     8221 gacgactcca gcagaaataa tcgaaccaga aaaactagct gaaccagtgc accaagcagt
     8281 tatcgaagaa aaagaaacac tttccgaaat ggaacaaatt ttggaagata ttcccgtaac
     8341 gcttgaagtg gtattcggaa cagcaaaagt aaaactcgaa aaatttatct cttggtgtga
     8401 aaaagatgtg attatcctaa aagagagtat gaacgaacca cttgtcttag cgctaaatgg
     8461 cgtgacgatt ggtaaaggaa ttttagttcg cgtggatgat cattttggta tacaaatgac
     8521 ggagttagta aggtgaaaaa tgtgcggaaa cttggactga tgacaatttt attttggctg
     8581 tgtttttcgg ttcaagcatt tgcagcagat cctgaacccc cgataatatc gcttgaaggc
     8641 gaacagcatg tttttacatc tggtgaagtg atttcgtttc atattgaaaa tgcggctgac
     8701 ttgaaaatta ttctggtgaa tgaacatgga cagagaaagc ttctagacga ggaaacgtat
     8761 acggtgacgg attgggattt ggacgggagt taccaagctg aattttatca agcagatgtg
     8821 ccgaaaccat ttgttactgt ggaagattta tttgaagtga aacagcttga ggacgttgcg
     8881 aaagatgaga cggcgccgag tttgaaaacg atagaaatta cgcacgatga agatgtcttg
     8941 ttaacgagcg tgctacgtgt atcagctgat ttagatgacg cggaatctgg cgtgaaacaa
     9001 gcgactttag ttgttcatag cgaatcgaat gaatcagaaa tcgaactcat tcgcaacaac
     9061 tatacaggga agtttgctgc agaaatacct ttagaaaaat tccaactggg tgaaaaaatc
     9121 acttttcaac tgcaactagt tgattttgcc gagaatgaaa tcacagtaga cttaggaaac
     9181 actgtccaac tatatcaacc aaaagcaccc cttttaagtt acgacggtaa tgacatcacg
     9241 aacgtgcaga aaaaaatcgg ccaagtcggc aagcaaatcg agctaactct cgacaaatat
     9301 acaactgaat ttccagaact agaaacagag accggcaaaa taatcccact aaaatggcaa
     9361 aaaacggcaa ctgaatggaa gggaagtcta actttaccga gcgaattatc cggtgaaatc
     9421 attcatattc aaggaatgga tcaacacctg ctcgttcgcg ccactagtga accttttggc
     9481 gaggttcagt tagtcaacaa tgccatttta acaggaacca ttctttcgga tttcacactt
     9541 atttcaaatc tttatattga agtaaacggt caaaaatttt ccgtcgaacg agcgggcaac
     9601 cgtttcacaa gtgcagaaat aaccaccaca ggcaaaatag tgctccactg gacagactgg
     9661 gacggccaaa tttattccaa gcaaatgaat caagaaatca agcctgtaat cgcaatccca
     9721 ggtaaagaaa taatcgcacc accaccagta ataccgaacg aaaaaacgca gatactaaca
     9781 tcaccagctc ctaagccatc tgttgaggca catgaaaata cccccaaaaa gcaggtgaaa
     9841 aaggaaacct caactaaaga caactcaagc agtatcccgt tttggattcc ggcgctcatg
     9901 attattggcg ttattatttt ttcgggtaat agagcaatga aataaaagca gaagtgaggt
     9961 ggacggaatg aaaatagatg gcattcaaga atctgcagaa aatcgtaatc aactagaacg
    10021 ggaactcatt aaacaaaatc cagttgtaaa agaaggtacg ataaaagcac aaatgaatac
    10081 agaagtagcc gtaccgaaaa caccgccagt atcattctct tttaaagaat taagtagctt
    10141 acaactaaac ggaacaagcg cagcaagttt agaattatat atgaaattaa tgatgaacaa
    10201 tgctaaaaaa gcgaatgatt taatctttta cgtgatgcgg gcgggaatca aaaatccaac
    10261 tgattctact aaatggcaaa cagtcagaag cgagattagt agccaattaa gtacaattct
    10321 aatgaaacaa cataattttg aagcgtactt ttctgaaaat cccgcgaatc aaaaattatt
    10381 tttagccaat caaaaaatta tgaacgaaat atcctttttg ctaaaaatgt tgccaacctt
    10441 aacttttgaa acaacaggaa aatacgactt cttgcgcatg atgcaaatag cttctggcaa
    10501 tatggagact ggaatccaaa tgatgcgcga attccagggg catatcgaac atgcgacaag
    10561 actagacccg attgttgacg ccagacaaga aacgaactgg atgattaaag tgttacgcga
    10621 atttggcaat atgttccaat cgcgccactt attaccatat gaattacagg cagaaaacat
    10681 caatatttgg aagttgggta gcgaatactt aaaactaatg aaccaacttt taccgcaaat
    10741 tggcgcattt ccaaatggga atatcaaaat ttttcaccaa caagcgacca agccattaac
    10801 ggaacttttc caagaactgc aacgcttggc agacggacaa atgacgcaag gtgggatcgc
    10861 cgttatttta gaccggatgc aaggccaact tacacgactt gcacaactgt ttcaaaaaat
    10921 ggaaatcgaa gcaggtttca ccgatacaga acgaatttta ggtagtgtgg acgccgaatt
    10981 cgctagtgat atgacaaaaa tgatgctact cgcacaacaa gaaatgtcat tttttgattt
    11041 attagtaaaa gatttccgaa gtgtttct
//
LOCUS       DASDYO010000106        10971 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.106, whole genome shotgun sequence.
ACCESSION   DASDYO010000106 DASDYO010000000
VERSION     DASDYO010000106.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10971)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10971)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10971
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.106"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            199..465
                     /locus_tag="U0290_002289"
     CDS             199..465
                     /locus_tag="U0290_002289"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphocarrier protein HPr"
                     /protein_id="HEM2302325.1"
                     /translation="MEQASFVVIDETGIHARPATLLVQAASKYSSDVQIEYTGKKVNL
                     KSIMGVMSLGIGKGADITIYTEGSDEKEAIEGLTEVLKKEGLAE"
     gene            465..2183
                     /gene="ptsP"
                     /locus_tag="U0290_002290"
     CDS             465..2183
                     /gene="ptsP"
                     /locus_tag="U0290_002290"
                     /EC_number="2.7.3.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464528.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate--protein phosphotransferase"
                     /protein_id="HEM2302326.1"
                     /translation="MAKELKGIAASDGIAIAKAYLLVEPDLSYEKTEVTDVESEVKRF
                     ESALEVSRTELSMIREKAAKDLGEDKAQIFDAHLLVLNDPELTGPIEESIKNSKTNAE
                     TALQETTDMFIGMFESMDNEYMRERAADIKDVRKRVLSHLLGVTIPNPALIDEEVVVV
                     AADLTPSDTAQLNRNFVKGFVTDIGGRTSHSAIMARSLEIPAVVGTKEVTASVAKNDI
                     VIIDGLEGNVIIHPTEEQIAHYEKIKSDFALQQAEWDKLKNEKTVSKDGVHVELAANI
                     GTPNDLEGVISNGGEAVGLYRTEFLYMGRDNFPTEEEQFEAYKAVVSGMDGKSVVVRT
                     LDIGGDKTLPYLELPEEMNPFLGFRAIRLCFANEELFRTQLRALLRASVYGNLKIMFP
                     MIATVNEFRQARDILLDEKAKLKAAGTEVSDSIELGIMIEIPAAAVLADQFAKEVDFF
                     SIGTNDLIQYTMAADRMNERVSYLYQPYNPSILRLVKMVIDASHKEGKWTGMCGEMAG
                     DQTAVPLLLGLGLDEFSMSASSILKSRSLIKRLDQSEMVKLAEEALNKSTAEEVVELV
                     EKYTAE"
     gene            2296..3330
                     /locus_tag="U0290_002291"
     CDS             2296..3330
                     /locus_tag="U0290_002291"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464529.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEM2302327.1"
                     /translation="MVIYLLAGFFLLLFIVLSFIDRRRISNGIILTMALFFSVLSVVY
                     ATFSKGNELLVSVMGTVLLLLVLLIPFFVVGIATMLIVNGRLMLKREGRKLANMLPLI
                     IGLGILALIITWFGSILKTGSPILGIVVVFIVALVGYFSFLFLSFLLSTFLYQFNFPR
                     YNQDFLIVLGSGLIGGDRVPPLLASRLNRAIKFYDKQYAKKGKRATFIVSGGQGANET
                     ISEAEAMRGYLIEKGIDENFIIMEDQSVNTLQNMKFSKAKMDAIMSNYNSLFSTNNFH
                     LFRAGIYARKAGLKSQGIGAKTALYYMPNALIREFIAITVMYKKVHMVLLGLLLLFFA
                     FLAIIGVTFR"
     gene            3343..4203
                     /locus_tag="U0290_002292"
     CDS             3343..4203
                     /locus_tag="U0290_002292"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464530.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM2302328.1"
                     /translation="MEKIGFVGTGVMGSSMAGHLLEAGYEVLVYTRTKTKAEDLLEKG
                     ALWIKTPGELANKVDILISMVGYPKDVEELYLGENGFLENLAVGTVAIDMTTSSPALA
                     KKMAEFGREKGIGVLDAPVSGGDIGAKNGTLAIMVGGSEDVFLKVKPIFDILGSSVIL
                     QGDAGAGQHTKMVNQIAIASNMIGVTEAIIYAEAAGLNPSSVLDSISGGAAGSWSLAN
                     LIPRVLKDDFSPGFFIKHFIKDMGIAISEAKQMGLELPGLTLAEKMYQTLAEQGLSEE
                     GTQALIKYYR"
     gene            complement(4240..5385)
                     /locus_tag="U0290_002293"
     CDS             complement(4240..5385)
                     /locus_tag="U0290_002293"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464531.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEM2302329.1"
                     /translation="MTKSIRPELRDIQVSGIRTFNTRVTGIPDMIRLTLGEPDFPTPE
                     HVKQAAISAIEENFTNYTPNAGMPELLEAASTYFHEKYDLSYNNKEIIVTVGATEAIS
                     VALQTILEPGDEVILPDPIYPGYEPLITLNRAHPVKVDTTETNFKLTPEQLRAHITPK
                     TKALIIPYPSNPTGVTLSKKELFALAEVLNETGIFVIADEIYSELTYHEEHVSIAPLL
                     REQTIVINGLSKSHAMIGWRIGFLLAPEALTQEMLKIHQYSVTCASSISQKAALEALT
                     NGKDDAFQMRTEYKTRANFTQDRLEKMGFTVIPPDGAFYFFVKLPDEITENAFDWAVK
                     LAEEAKVAVVPGNAFSEKGDRYFRLSYATSFNNLAEALDRMAQFIAK"
     gene            5605..5826
                     /locus_tag="U0290_002294"
     CDS             5605..5826
                     /locus_tag="U0290_002294"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464532.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302330.1"
                     /translation="MTKPGKYEALFFPTKDGLLKIHAYGFNPCGSWGEVFATIGDQTI
                     CVKGFNRHKTIVRATKMIISATANRKNEF"
     gene            6131..6364
                     /locus_tag="U0290_002295"
     CDS             6131..6364
                     /locus_tag="U0290_002295"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464533.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YkuJ family protein"
                     /protein_id="HEM2302331.1"
                     /translation="MSQLLGIIQRLHAMQEDESAETQARRFEKNGTPVCEVKFFQASN
                     SFEVEIYGDNSKYQFDDIDMTAIEIFETLQENE"
     gene            6566..7018
                     /locus_tag="U0290_002296"
     CDS             6566..7018
                     /locus_tag="U0290_002296"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464534.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEM2302332.1"
                     /translation="MISNRFGQFIDNELADSMISAEKVAHVQLGNNLEHALLVLTKCG
                     YSVIPVLDFEFKLHGLISAAMITDAILGLERIEFERLEDLKVEDVMQTDFPVIKDFNN
                     NERIVHLLVDHPFVCVVDADHHFEGIVTRRVVLKQVNRYIHLQVEENR"
     gene            7015..7893
                     /locus_tag="U0290_002297"
     CDS             7015..7893
                     /locus_tag="U0290_002297"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464535.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2302333.1"
                     /translation="MIVTEYELLVCLAEELNMRKSAEKLFLSQPALSQRLQTIESRWN
                     TKIFIRTQKGLLLTPEGEAIVRHASSVIEREHTIQEKLEAMEGVVRGTLRIACASVVA
                     QMWLPRVLKAFSRTYPNVQISLVTGWSSEVTQQLAAGNVHIGIVRGSSTWKSVQKPLF
                     NDKLILVDTEITKIEEVFQTNRPFIQFRSDSNYYQVIQDYWQRNFGKMPRQAMLMDQM
                     ETSRQMALNGIGFAILPEVTMIGYTDKINKIPLTEKDGSILSRETNLLTYEQSLSLPQ
                     VKAFLEITDKFLEQVK"
     gene            7941..8651
                     /gene="dapD"
                     /locus_tag="U0290_002298"
     CDS             7941..8651
                     /gene="dapD"
                     /locus_tag="U0290_002298"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464536.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2,3,4,5-tetrahydropyridine-2,6-dicarboxylate
                     N-acetyltransferase"
                     /protein_id="HEM2302334.1"
                     /translation="MEQMDAHQIISFIQNSKKATPVKVYLKGDLEKIDFPSDVKTFIT
                     GNAGTIFGEWAVVEPFLEANKANIEDYVIENDRRNSAIPLLDMKNINARIEPGAVIRD
                     QVTIGDNAVIMMGASINIGSVIGDGTMIDMNVVLGGRATVGKNCHIGAGSVLAGVVEP
                     PSAQPVVVEDNVVVGANVVVLEGVRIGEGAVVAAGAIVTKDVAPGTVVAGIPARELKK
                     LDAKTASKTEIMQELRQL"
     gene            8715..9830
                     /locus_tag="U0290_002299"
     CDS             8715..9830
                     /locus_tag="U0290_002299"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetyldiaminopimelate deacetylase"
                     /protein_id="HEM2302335.1"
                     /translation="MLNEFIAIRRELHQIPETGYKELKTQAYLLDYISKLPSEHLEVK
                     KWRTGILVLVKGTNPEKTIGYRTDIDALPITEETGLPFASKHPGNMHACGHDLHMSIA
                     LGVLTHFASKPAKDNLLFVFQPAEEGPGGAKPIMESAEFAEWRPDSIYGLHIAPEYKV
                     GEIAIKPGLLFANTSELFISFKGKGGHAAYPHLANDMVVAASAFVGQMQTIISRNIDP
                     MDSAVITIGRIHGGEIQNVIAETAYLDGTIRTLSPETMEIVWTRLKQLAKGWEEAYQC
                     EVEFHPGSDYYQVDNDPVETEAFIHFLEEQYPESYVPARSAMTGEDFGYFLSEIKGFM
                     FWLGVDSEYSLHHAKLSPKEEAIPFAIDVLIHFLESK"
     gene            complement(9874..10719)
                     /locus_tag="U0290_002300"
     CDS             complement(9874..10719)
                     /locus_tag="U0290_002300"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464538.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mechanosensitive ion channel family protein"
                     /protein_id="HEM2302336.1"
                     /translation="MNLLKKWFSSIDWDQFWNHIISVGIKIAILIALYFIFRVVGNKI
                     IRSFFRKYRQQQAVSVGRADTLESLISNFYGYVLFFTFAILLLQNFMDVTAIIASAGV
                     ASLAIAFGAQGLVSDVVTGFFILLERQLDVGDTITIGLVNGTVEALGLRTTQVRDFDG
                     TLHFIPNRQIMVVSNHSRGNMRVMVDIQISPHEDPEKAIKIIGEVCDVAAKENKNIVE
                     PPVVLGVQNIDATNMIIRVVGKAVNGEQYSVQRDLLKDIREALAENEIELPLNFVSTF
                     GPNNN"
BASE COUNT         3506 a         1830 c         2303 g         3332 t
ORIGIN      
        1 aaaacgttct attttttcta tttaaaaaga gcgaaataag gtgctctgca aaaaaacatt
       61 ctaaaaaatt tttaatcaaa tagttgtaac aataggtaaa acatggtact ctttttaatt
      121 gagggatagt ctttttggct gaagtttttt cggcttaaaa ggttacaaca aatttcttta
      181 caaaggagaa tgtaaattat ggaacaagca agttttgtag taatcgatga aacaggaatt
      241 cacgcacgcc cggcaactct attggtgcag gctgcaagta aatacagctc tgacgttcaa
      301 attgaataca ctggcaaaaa agtaaacctt aaatcaatca tgggcgttat gtctcttggt
      361 attggtaaag gcgctgacat tactatctac actgaaggta gcgatgaaaa agaagcaatt
      421 gaaggactaa ctgaagttct taagaaagaa ggattggctg aataatggct aaagagttga
      481 aaggtatcgc agcatctgat gggattgcca ttgcgaaagc ttatctgctc gttgaacctg
      541 atctttccta tgaaaaaaca gaagttacgg atgttgagag tgaagtaaag cgttttgaaa
      601 gcgcgttaga agtttctaga acagaacttt caatgattcg tgagaaagct gctaaagact
      661 taggcgaaga taaggcacaa atttttgacg cgcatcttct agtgttaaat gatcctgaat
      721 taacaggacc aattgaagaa agtatcaaaa attctaaaac gaatgcagaa acagctttac
      781 aagaaacgac agacatgttt attggtatgt ttgaatctat ggacaacgaa tacatgcgtg
      841 aacgtgcagc ggatattaaa gatgtacgta aacgtgttct ttctcactta ctaggtgtaa
      901 ctattcctaa tccagcttta attgatgagg aagtagttgt tgttgcagct gatttaacgc
      961 cttccgatac cgcacaactt aaccgtaact ttgttaaagg tttcgtaacg gatattggtg
     1021 gacgtacttc tcactccgct attatggcac gttctcttga aattccagca gtagttggaa
     1081 caaaagaagt tactgctagc gtagcgaaaa acgatattgt tattattgat ggtttggaag
     1141 gtaatgttat catccaccca acagaagaac aaatcgctca ctatgaaaaa attaaatctg
     1201 attttgcttt acaacaagca gaatgggata aacttaaaaa tgaaaaaacc gtttctaaag
     1261 acggcgttca cgtggagctt gcagcaaaca tcggaactcc gaatgattta gaaggtgtta
     1321 tttctaacgg tggggaagca gttggacttt atcgtacaga attcttgtac atgggtcgcg
     1381 acaatttccc aacagaagaa gagcaattcg aagcttataa agcagtagtt tccggaatgg
     1441 acggaaaatc tgtggttgtt cgtacattag atatcggtgg cgataaaaca ttaccatacc
     1501 tagaacttcc tgaagaaatg aacccattct taggattccg tgcaatccgt ctttgttttg
     1561 cgaatgaaga attattccgt acacaacttc gcgccttact tcgcgcaagt gtatatggta
     1621 acttaaaaat tatgttcccg atgattgcaa cagtaaatga attccgtcaa gcgcgtgata
     1681 ttttactaga tgagaaagca aaactaaaag ctgctggaac agaagtatct gattccatcg
     1741 aacttggaat tatgattgaa attcctgctg ctgctgttct tgctgatcaa tttgcgaaag
     1801 aagttgattt cttctctatc ggaacaaatg acttaattca gtatacaatg gctgcagacc
     1861 gtatgaatga acgcgtttct tacctttacc aaccatacaa tccatccatt ttacgtttag
     1921 tcaaaatggt tatcgatgct tctcataaag agggcaaatg gactggtatg tgtggagaaa
     1981 tggctggaga tcaaacggct gtaccacttc ttttaggcct aggcttagat gaattttcaa
     2041 tgagtgcttc aagcattctt aaatctcgtt cgttaatcaa acgtttagat caatctgaaa
     2101 tggtgaaatt agcggaagaa gctttaaata aatctacagc agaagaagtt gtagaattag
     2161 ttgaaaaata tactgcagaa taatatctga ataaagacct agacaatttt gttgtctagg
     2221 tctttttatg ttgtgaaata gcctccgccc aagtataatt ggaaatacag ttagttttaa
     2281 aagggggcaa caagattggt tatctatcta ttagcaggtt tttttctgct tctgttcatt
     2341 gtcttgtcgt ttatagatag acgacgtatt agcaatggga ttattttgac aatggcacta
     2401 tttttttctg tgctttcggt ggtttatgct actttttcaa aagggaatga actactcgtc
     2461 tcggttatgg ggacggtgtt acttttatta gttttactta ttccattttt tgttgtaggg
     2521 atagcaacga tgctcattgt aaatggacga ttaatgttga aacgtgaagg gcgtaaatta
     2581 gccaatatgc ttcctttaat tattggttta ggcattttag cacttattat tacatggttc
     2641 ggtagtattt taaaaacagg tagtccgatt cttgggattg tggtagtttt tattgtggca
     2701 ttagttggtt atttttcctt tttattttta tcgtttcttt tatcgacttt tctctatcaa
     2761 tttaatttcc caagatataa tcaagatttt ctgattgtac taggaagtgg tctgataggc
     2821 ggtgatagag tacctccatt gcttgctagt cggttgaatc gcgctattaa gttctacgac
     2881 aagcaatacg ccaaaaaagg caaacgagct acttttatcg tatctggtgg acaaggtgct
     2941 aatgaaacta tttcagaagc agaagcgatg cgaggttatt taatagaaaa aggcattgat
     3001 gaaaatttta ttattatgga agatcaatcc gttaatacac tgcaaaatat gaaattttca
     3061 aaggcaaaaa tggatgcaat tatgtcaaac tataatagtt tattttcaac gaataatttt
     3121 catttattta gagcaggtat ttatgcaaga aaagcgggct tgaagagtca agggattggt
     3181 gcaaaaacag ctttatacta tatgcctaat gcgttaattc gagaatttat tgctattact
     3241 gtaatgtata aaaaagtaca tatggtctta cttggtttat tactattgtt ttttgcgttt
     3301 ttagcgatta taggtgttac ttttagatag gaggttagcc tgatggagaa aattggattt
     3361 gttggtacag gcgtaatggg ttcgagtatg gcagggcatt tactggaggc tggttatgaa
     3421 gtattggtgt atactcgcac aaaaacaaaa gcagaagatt tacttgaaaa aggagcacta
     3481 tggataaaaa caccaggaga attggctaat aaagtggata tattaatttc aatggttggt
     3541 tatccaaaag atgtggaaga gctttactta ggcgaaaatg gctttttaga aaatttagcg
     3601 gttggcacag tagcaatcga tatgacaact tcctcaccgg cattagctaa aaaaatggct
     3661 gaatttggcc gtgaaaaagg aatcggtgta ctcgatgctc ctgtttcagg tggcgacata
     3721 ggcgcgaaaa atggcacgct cgcaattatg gtaggaggat ctgaagacgt atttttaaaa
     3781 gtgaaaccaa tttttgacat tcttggtagc agtgtgattc tgcaaggtga tgcaggtgct
     3841 ggacaacata ccaaaatggt gaatcaaatt gcaattgctt ccaacatgat tggtgtgact
     3901 gaagcgatca tttatgcgga ggcggctgga cttaatccat caagtgttct cgattcaatt
     3961 tcaggtggtg cagcaggcag ttggtcgctt gcaaacttga ttccacgtgt acttaaggat
     4021 gatttttctc cgggtttctt tattaagcat tttataaaag atatgggaat cgcaatctca
     4081 gaagcaaaac aaatgggctt agaacttcct gggctaactt tagctgaaaa aatgtatcaa
     4141 acgctagctg aacaaggttt gagtgaagaa gggacgcaag cgctcattaa atattatcgt
     4201 taaaaaaaca tccactaatt taagttagtg gatgtttttt tattttgcta taaactgagc
     4261 cattcgatct aatgcttcag caagattatt aaaggaagta gcataagaaa gacggaagta
     4321 acgatcgcct ttttcggaaa aagcatttcc aggaacaact gcaaccttgg cttcttcagc
     4381 aagttttaca gcccaatcga aagcattttc ggttatttca tcgggaagtt tgacgaagaa
     4441 gtaaaatgca ccatctggcg ggatgacagt aaagcccatt ttttctagtc gatcttgagt
     4501 gaaattagcg cgtgttttgt attcagttcg catttgaaaa gcatcgtctt tgccgttagt
     4561 aagagcttct agtgctgctt tttgggaaat ggaacttgcg caagtaaccg aatattgatg
     4621 gattttcaac atttcttgtg taagggcttc tggtgcaagt aaaaagccaa ttcgccaacc
     4681 aatcattgcg tgagattttg ataaaccgtt gataacgatt gtctgctctc ttagtaaagg
     4741 cgcaatgctc acgtgctcct cgtgataagt taattcactg taaatctcat cagcaatgac
     4801 aaaaatacct gtttcattta gtacttctgc taatgcgaaa agttcttttt tagagagtgt
     4861 aacaccggtc ggattggatg gataaggaat gataagtgct ttagtttttg gtgtgatatg
     4921 tgctcgtaat tgttcaggtg ttaatttgaa attagtttcg gtcgtatcaa ctttaaccgg
     4981 gtgcgctcta tttaacgtaa ttagaggctc gtaacctgga taaatagggt ctggtaagat
     5041 aacttcatcc ccaggctcca aaatcgtttg caaggcaacg gagatagcct ctgtagcgcc
     5101 gaccgtaacg ataatttctt tattattata ggacaagtca tatttttcat gaaaataagt
     5161 ggaagctgct tcgagtaatt ctggcatccc ggcattgggt gtatagttgg tgaaattttc
     5221 ttctattgct gaaatggccg cttgtttgac atgctcaggc gttggaaagt caggttcgcc
     5281 aagtgttaaa cggatcatat caggaatacc cgtcactcgt gtattaaaag ttctgatacc
     5341 acttacttga atatcgcgta attctggtcg aatagatttt gtcattttcg tcacctttct
     5401 ttataagaaa atcccgtgaa aatcaggtgg gagtaagctt cgtgatttca ttccattata
     5461 gcttaaaaag gaagaaaagc aaaatgtctg aaaatatacc taaaaaacct tgcactttta
     5521 tgtagaatac tataagatag ttttaataat gataatcatt ttcagttaga aatgattact
     5581 tcaatgcgga aggggccacc ggatatgact aaaccaggta aatacgaagc tctctttttt
     5641 ccaacaaaag atggcttgct aaaaatacat gcttatggct ttaatccctg tggttcatgg
     5701 ggcgaagtat ttgcaacaat tggtgatcaa acaatatgcg ttaaaggttt caatcgccac
     5761 aaaaccatcg tacgagcgac aaaaatgatt atcagtgcta ctgctaatcg gaaaaatgaa
     5821 ttttaattat caaagactgt aggaaggtta atcccttttt atagtctttt ttttggataa
     5881 aataacggca aagtagaaca aatcatgtct tttaggttaa tttaaaataa tttctttttc
     5941 tgaatatttc cagaaccctt gcgttatacg tgcggtttgc gataaaattt ggtagtatag
     6001 tgaaagaaat aagatatggc gaaaaaacca gatatgagga aatatgtaaa aaagcattgc
     6061 cacgcgcgta taatagcaag gtatgccaat ttttgcacgt cagatggtgg atttgagagg
     6121 agagtgtaag atgtctcagt tattgggaat tattcaacgt ttacatgcaa tgcaagaaga
     6181 tgagtctgct gaaacacaag caagacgttt tgaaaaaaat ggtacgcccg tgtgcgaagt
     6241 aaagtttttt caagcttcta actcatttga agtagaaatc tacggcgaca atagtaaata
     6301 tcaattcgat gatattgata tgactgctat cgaaattttt gaaacgctac aagaaaacga
     6361 ataacatggt aaagatcgga taagccggtg gtttacttag ggggctgtga atttatattc
     6421 acagcttttt ttgttttcaa gcactaaatg aaagaaatta gaccaaatag tatggtagaa
     6481 taggagatgg aaaagtttcg atttatttta aaaagttgaa agaaacttcg tagagcttga
     6541 aaataaagga agaggaagat tctaaatgat ctcaaataga tttggacaat ttattgataa
     6601 tgaactagct gattcgatga tttccgctga aaaggttgct catgtacagc ttggtaataa
     6661 tttagaacat gcattacttg ttttaactaa atgtggttat tcagttattc ctgtactaga
     6721 ctttgaattt aaactccatg gattaataag tgcagcaatg attacggatg ccattcttgg
     6781 actcgaacgt atcgaatttg aacgattaga agacttaaaa gtagaggatg tcatgcaaac
     6841 ggatttccca gtaatcaaag attttaacaa taacgaacga attgtgcact tacttgtgga
     6901 ccatcctttt gtatgtgttg tagatgctga ccaccatttt gaagggatag taacaagacg
     6961 tgttgtttta aaacaagtca atcgttatat tcatttgcag gtggaggaaa atagatgatt
     7021 gtaacagaat atgaattact tgtttgttta gcagaagagc ttaatatgcg taaaagtgcg
     7081 gaaaaactat ttttaagtca accggcctta tcgcaacgct tacaaacgat tgaaagtaga
     7141 tggaatacca aaatttttat tcgtacacaa aaaggcttac tgcttacacc agaaggagaa
     7201 gctattgttc gtcatgcgtc tagtgtcatt gaacgagagc acactattca agaaaaactc
     7261 gaagcgatgg aaggcgttgt ccgcggaaca ttacgaattg cttgtgcaag cgtagtggcg
     7321 caaatgtggc ttcctcgggt tctgaaagca ttttcaagaa cgtaccctaa tgtgcaaatt
     7381 tcacttgtaa ctggctggag cagtgaagtt acgcaacaac tcgctgctgg aaatgtccat
     7441 atcggcattg tccgtggaag ctccacatgg aaaagtgttc aaaaaccgtt atttaatgac
     7501 aaattaattt tagtagacac agaaattacc aaaattgaag aagttttcca aactaatcga
     7561 ccatttattc aatttcgcag tgattcgaat tattaccaag ttattcaaga ctactggcaa
     7621 cgaaatttcg gaaaaatgcc acgccaagca atgcttatgg atcagatgga aacctctaga
     7681 caaatggcct taaatggtat tggttttgca attttaccgg aagtgacgat gataggctac
     7741 acagataaaa tcaacaaaat tcccttaacg gaaaaagatg gctcgatttt aagccgggaa
     7801 accaacttgc tgacctatga acagtcactc agtttaccac aagtgaaggc gtttttagaa
     7861 ataacagata aattccttga acaagttaaa tagctatggc aaaatagaaa acagaacgta
     7921 tcggaagggg acaaaaattc atggaacaaa tggatgcaca tcaaattatt tcttttattc
     7981 aaaatagcaa gaaagcaaca cctgtaaaag tttaccttaa aggggactta gaaaaaattg
     8041 atttccctag tgatgttaaa actttcatta ctggaaatgc gggaactatt tttggagaat
     8101 gggcagttgt tgagccattt ttagaagcaa ataaagcgaa tattgaagat tatgttatcg
     8161 aaaatgatcg tcgtaactcg gctattcctt tgttagatat gaaaaatatt aacgcacgta
     8221 ttgagccagg cgcagttatt cgcgaccaag taactattgg tgataatgct gtaattatga
     8281 tgggagcaag cattaatatt ggttctgtta tcggtgacgg tacgatgatt gatatgaatg
     8341 ttgttctagg cgggcgcgca acggttggta aaaattgcca tatcggtgca ggttctgtgc
     8401 ttgctggcgt agtggaacca ccatccgcac aaccagttgt cgtagaagat aatgttgttg
     8461 taggcgccaa tgtggttgtt ttagaaggtg tacgtattgg agaaggcgca gtcgtagcag
     8521 ctggcgcaat cgttacaaaa gacgtagctc ctggaacagt tgtggctggg attcctgcac
     8581 gtgaacttaa aaaattagac gcaaaaacag cttctaaaac tgaaatcatg caagaacttc
     8641 gtcaacttta aaaattaaag ggaactgttt cgtctgttgg cgaagcagtc cttttttaga
     8701 aggagagaat cgctgtgtta aatgaattta ttgccattcg acgagagtta caccaaattc
     8761 ctgaaacagg ttataaagag cttaaaaccc aagcctattt attagactat attagcaaat
     8821 taccgagtga acatttagaa gtgaaaaaat ggcgtacggg gattttggtt ttagtaaaag
     8881 gaactaatcc agaaaaaaca attggttatc gtaccgatat tgatgcgttg ccaattacag
     8941 aagaaactgg gctgcctttt gcatcaaaac atcctggcaa tatgcatgct tgtgggcacg
     9001 atttacatat gagtatcgcg cttggtgtat tgacgcattt tgcgagtaaa ccagccaaag
     9061 ataatttgct tttcgttttc cagcctgccg aagaaggtcc aggtggtgca aaacccatca
     9121 tggaaagcgc tgaatttgcc gagtggcgac cggatagcat ttatgggctt catatcgcac
     9181 cagaatacaa agtcggagaa attgcaatta agccaggttt actttttgcg aatacatcgg
     9241 aactttttat ttcgtttaaa ggaaaaggtg gacacgcggc gtatcctcat ttggcgaatg
     9301 atatggttgt cgcagcaagt gcgtttgttg ggcaaatgca aacgattata agtcggaata
     9361 ttgatccaat ggatagtgca gttattacga ttggccgaat tcatggcgga gaaattcaaa
     9421 atgtcattgc ggaaactgct tatttagatg gaaccattcg aacgctttcc cctgaaacaa
     9481 tggagattgt ttggactcgt ttgaaacagc tagcgaaagg ctgggaagaa gcttaccaat
     9541 gcgaagttga atttcatcct ggctcggatt attatcaagt ggacaatgat ccagttgaaa
     9601 cagaagcatt catccacttt ttggaagaac aatatccaga aagttatgtg ccagctcgtt
     9661 cggcgatgac tggagaagat tttggttact ttttatccga aattaaaggg tttatgtttt
     9721 ggttaggcgt ggattccgag tacagtttgc atcatgcgaa acttagtcca aaagaagaag
     9781 ctattccatt tgcaattgat gtattaatcc actttttgga aagtaaataa aaagacgtca
     9841 attcgttctc aaaaggagcg aattggcgtc tttttaatta ttatttggtc cgaaggtgct
     9901 gacaaaatta agtggtaact cgatttcgtt ttctgcgagt gcttcgcgaa tatctttgag
     9961 taagtcacgt tgaacagaat actgctcgcc gttcactgct ttaccgacta cgcggataat
    10021 catgtttgtt gcgtcaatgt tttgcacacc taatacaaca gggggctcaa cgatattttt
    10081 attttctttt gcagctacgt cacaaacctc accgataatt ttaattgctt tttccggatc
    10141 ttcatgtgga ctaatttgaa tgtccaccat cacacgcata ttaccgcgcg aatgattact
    10201 aacgaccata atttgcctgt taggaatgaa atgaagcgtg ccatcaaaat cacgtacctg
    10261 tgttgttcta agtccaagtg cttctactgt tccattaact agtccaatgg taatcgtatc
    10321 accaacatca agttgacgtt caagtaaaat aaaaaatcca gtcacaacgt cactaacaag
    10381 tccttgcgca ccaaaggcaa tagccaaact cgccacccca gcacttgcaa taatcgctgt
    10441 aacatccata aagttctgta ataataaaat cgcaaaagtg aagaataaaa catagccgta
    10501 aaaattagaa atcaagcttt ctaacgtgtc cgcgcgccca acagaaactg cttgttgttg
    10561 ccgatatttg cggaagaaac tacggataat tttattccca accacgcgga aaataaaata
    10621 aagagcaatt aaaatggcga tttttattcc tactgaaata atatgattcc aaaattggtc
    10681 ccagtcaata gaactgaacc actttttgag taaattcatc ttctggtcca catcctttga
    10741 aagttctcca tccatttcat ctcccccttc ctaaatgaaa tgtccttttc tattctaaca
    10801 aatattttat aaaaatgctg tttttaaaat aaattatccc cagaaaatgc gcttttttcg
    10861 tgaaaaatcc tcctttttta caaaaaaaat taaaaaactg tcagccgctg ttgttgtaag
    10921 atggaggcgc tttctaaaat gtgcaaaata gcgcaaacca aactgtatga t
//
LOCUS       DASDYO010000107        10967 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.107, whole genome shotgun sequence.
ACCESSION   DASDYO010000107 DASDYO010000000
VERSION     DASDYO010000107.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10967)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10967)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10967
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.107"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..622
                     /locus_tag="U0290_002301"
     CDS             <1..622
                     /locus_tag="U0290_002301"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="2-C-methyl-D-erythritol 4-phosphate
                     cytidylyltransferase"
                     /protein_id="HEM2302337.1"
                     /translation="IIVHTVEKFILNTRFDKILISSPKEWMNHAEDNIKKYISDDRIV
                     VIEGGEDRNETIMNGIRFVEKTYGLTDDDIIVTHDAVRPFLTHRIIEENIDAALETGA
                     VDTVIEALDTIVESSNHEVITDIPVRDHMYQGQTPQSFNMKKVFNHYQNLTPEKKQIL
                     TDACKICLLAGDDVKLVKGEIFNIKITTPYDLKVANAIIQERIAND"
     gene            615..1640
                     /locus_tag="U0290_002302"
     CDS             615..1640
                     /locus_tag="U0290_002302"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464612.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alcohol dehydrogenase catalytic
                     domain-containing protein"
                     /protein_id="HEM2302338.1"
                     /translation="MINQVYRLVSERQFEVANVDESLTGDVVVVRPTHLSICAADQRY
                     YTGSRGKEMLSKKLPMALIHEGVGEVVYDATKEFKPGTKVVMIPNTPFENDPVIAENY
                     LRSSKFRSSGYDGLMQDYVFMRRDRVVALPDDINMKVAAFSELISVAVHAILRFEGKS
                     NANRESFGVWGDGNLGFITSLLLKNWYPDSKVYIFGKTPYKLDFFSFVDGAYAIDDVP
                     ADLVIDQAFECAGGMGSQYAVSQIIDVIKPEGTISLLGVSEYPIEFNSRMVLEKGLTV
                     YGSSRSGRVDFEKTVEFLSTNKRGVEYLQNLVGEVHTVHSIQDVIEAFEADLRSPWGK
                     SVMEWKI"
     gene            1783..3162
                     /locus_tag="U0290_002303"
     CDS             1783..3162
                     /locus_tag="U0290_002303"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM2302339.1"
                     /translation="MKFAIIMPFYNAEKRLALSIDSIIKQSYSFLKHVEVLLINDGST
                     DGSGAIANRYATKYPNNIRVLTVPNGGPAKARNIGIHNVSEDTDFVGFLDADDIMSEN
                     MLASIVTFLNESNVSMLVPAFYYLDDFGSKKKISPHKLNYRFANGNRVADIEKEPEAI
                     HFYIGGTFLRYDCLKEFTFDESLYFAEDQLLITQFLLKYRSYGLIADAGYYYYRDLKQ
                     KGSLVSSSWKKPERYTPFLQKVYQTYLTDSKEIYGKVIPYVKYLIAYHAKLFFYKENT
                     YFREVLSESEQAIFVQELQKILQEVGASTIMELDTPLVVKEMMCSILQNGWPLQFETA
                     EKQDIPLVTVKENYRIGKTVAIELLLEEADIHDVKWVARTSFKEMPARLVKRKENQTI
                     WDVVVREKGTVEKAVFKLKPYQTKARLFYQDEEKDTPIADINIISSILGKLKRNRALK
                     RKFKQGGVS"
     gene            3162..4316
                     /locus_tag="U0290_002304"
     CDS             3162..4316
                     /locus_tag="U0290_002304"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724629.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HEM2302340.1"
                     /translation="MKLVQKVYYLLFRLVGFLPRKKDLVIFESFSGKQYSCNPRAIYE
                     YMEEHNPEYELLWSVNPKFVAVFEAYGVPYVKRFSISWLFKMGLAKYWISNSRLPLEL
                     PKPKKTIYVQTWHGTPLKKLGVDIDEVHIPGQTTEQYKADFVKEAQKWDYLISPNAYS
                     SAIFRRAFGFTGEMIESGYPRNDILFSTDKELKIANIKKELNIPEEKKVVLYAPTWRD
                     NDFYEAGRYKFDLKIDIAKMQEKLGNEIVLLVRMHYLVAEHFDFTQYGDFVRDASNHE
                     DIRDLYLVSDLLITDYSSVFFDYANLQRPMLFYTYDLAEYRDTLRGFYFDFEKNAPGP
                     LVETNEELMSELEKMLENPPKIEDSFLEQFCTWEDGHAAEKTVKIVFAEK"
     gene            4329..5480
                     /locus_tag="U0290_002305"
     CDS             4329..5480
                     /locus_tag="U0290_002305"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581563.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol glycerophosphotransferase family
                     protein"
                     /protein_id="HEM2302341.1"
                     /translation="MKEVAIYIYMLAVKITGCLARIFPVKQKVVLLVSFPENSTAIIK
                     QMNEMKVTPKTVVFYDPRVDVTGFNFDFIQLKPKKIKHFISLMFHLNTAKVVITDNYF
                     VELAGLKERKNVTCIQIWHANGALKKFGWEDKAAQKRSARDKKRFQEVYRCFSKVLVG
                     SDEMAAIFQRSFLLEDSHMLKLGIPRTDNFFNQQQLKENAERTNTKLHLSNKKKLLYA
                     PTFRDEELHSTTLHLDIAKMKQALGNEYQLILKLHPSISNDLDEVVDDFVVYADKETP
                     IETILPAVDILITDYSSIPFEFALLEKPMIFFTYDLEEYDKARGLSDGFLATIPGPFV
                     HTTEELIQLIEQEAFDLEMVRAFAAKWNKYSDGHSSERFVSFLKEQLEK"
     gene            5545..5928
                     /gene="tagD"
                     /locus_tag="U0290_002306"
     CDS             5545..5928
                     /gene="tagD"
                     /locus_tag="U0290_002306"
                     /EC_number="2.7.7.39"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycerol-3-phosphate cytidylyltransferase"
                     /protein_id="HEM2302342.1"
                     /translation="MKKVITYGTFDLIHWGHIRLLERAKALGDYLIVAISTDEFNRIK
                     HKEAYHNFEHRKLILEAIRYVDEVIPESNWEQKLEDVKNRDIDIFVMGDDWEGEFDFL
                     KPYCEVVYLPRTDGISTSKIKDDLK"
     gene            6046..7536
                     /locus_tag="U0290_002307"
     CDS             6046..7536
                     /locus_tag="U0290_002307"
                     /EC_number="6.3.4.21"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464617.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate phosphoribosyltransferase"
                     /protein_id="HEM2302343.1"
                     /translation="MTNLFQDDSLTLHTDLYQLNMMKAYFDDGLHERRSVFEVFFRDM
                     PFDSGFVVFAGLERIIHYMQNLRFTETDIAYLHDELGFEGPFLEYLRNFKFKGNILAA
                     KEGEFVFKTEPILQVEASLAEAQLIETALLNIVNFQTLIATKAARIRSVIDDETFAEF
                     GTRRAQEMDAAIWGTRAAYIGGCDSTSNVRAGKIFGIPVSGTMAHAMVQAYRDELEAF
                     RSYAKTHFDSIFLVDTYDTLKSGVPNAIKVAKEMGDKINFIGIRLDSGDMAFLSKKAR
                     QMLDEAGFTEAKIFASSDLDEHTILSLKAQKAKIDSWGVGTKLITAYDQPALGAVYKM
                     AAIADENDILQDSIKLSSNTEKVSTPGKKKVYRIITNEDGLKAEGDYIALADESLENV
                     DKLTMFHPVHTYIMKTVENFTARELLVPIFQNGELVYDMPSLDEIKAYKEENLALLWD
                     EYKRTVRPEQYPVDLSVKCWKNKMRNIEKVRKSVQLHSPVELDMPF"
     gene            7548..8372
                     /gene="nadE"
                     /locus_tag="U0290_002308"
     CDS             7548..8372
                     /gene="nadE"
                     /locus_tag="U0290_002308"
                     /EC_number="6.3.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464618.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ammonia-dependent NAD(+) synthetase"
                     /protein_id="HEM2302344.1"
                     /translation="MEIRERILADMQVAETIDAHEEIRKSVEFLKAYLKKNTFLKSFV
                     LGISGGQDSTLTGKLAQMAISEMRAETGDDQYQFFAVSLPYGTQLDESDRQDALNFME
                     PDNRLTVNIKASVDASVAALAEAGVELSDFAKGNEKARERMKVQYAIAAMHKGVVVGT
                     DHSAEAVTGFYTKYGDGGTDINPLFRLNKRQGKALLKELGCPEHLYLKKPTADLEDNK
                     PALPDEVALGVTYDQIDDYLEGKEVPADAAAKIENWFIKTEHKRHMAITIFDDFWK"
     gene            8385..8693
                     /locus_tag="U0290_002309"
     CDS             8385..8693
                     /locus_tag="U0290_002309"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="antibiotic biosynthesis monooxygenase"
                     /protein_id="HEM2302345.1"
                     /translation="MKVGYGLLTAFYTHPGEKDNLVKILLEAAEGLDDYNTCIQYIVS
                     ESETEPDTVFVSEIWVDKGHHAASLDNPAVQETIARAKPMIKEIKQIQELDILGGKGI
                     "
     gene            8753..9157
                     /locus_tag="U0290_002310"
     CDS             8753..9157
                     /locus_tag="U0290_002310"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464620.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2302346.1"
                     /translation="MKTLMIVCAGGATSSLMAQNVVKSATSEGMDAVLLFPDDVKYKD
                     SFREKYSERDLVVVMGPVGAITAGKFRDYKEQVDAVLVAPQVKYMYKTVEEVLGELSI
                     PCANIDSLDFGRMRGDKILTQGLALMDAKNSK"
     gene            9286..10842
                     /gene="guaA"
                     /locus_tag="U0290_002311"
     CDS             9286..10842
                     /gene="guaA"
                     /locus_tag="U0290_002311"
                     /EC_number="6.3.5.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamine-hydrolyzing GMP synthase"
                     /protein_id="HEM2302347.1"
                     /translation="MFKIMKDFTEQEKIIVLDFGSQYNQLITRRIREFGVYSELHPHT
                     ITVEEMKALNPTGIIFSGGPNSVYDEDAFRADERIFDMGIPILGICYGMQLMTTHFGG
                     KVERAKDREYGKADIHVEKPNRLFAGLPTDQVVWMSHGDLVVEEPAGFEVTITSKSCP
                     IAGIADEERSLYGVQFHPEVRHSVYGNELLKNFALNVCGCKGDWTMENFSEVEIAKIQ
                     EIVGDKKVLLALSGGVDSSVVGVLIHKAIGDQLTCIFVDHGLLRKGEADQVMATLQGE
                     FNMNIIKVDAKKRFMDKLAGVSDPEQKRKIIGNEFIYVFDDEANKLDGVEFLAQGTLY
                     TDIIESGTATAQTIKSHHNVGGLPEDMQFKLIEPLNTLFKDEVRALGTELGMPDAIVW
                     RQPFPGPGLGIRVLGEITEEKLEIVRDSDYILREEIKNAGLEREIWQYFTALPNIRSV
                     GVMGDGRTYDHTVVVRAVTSIDGMTADWARIPWDVLEKISVRIVNEVDHVNRVVYDIT
                     SKPPATVEWE"
BASE COUNT         3599 a         1724 c         2443 g         3201 t
ORIGIN      
        1 aattattgtt cataccgttg aaaaatttat tctaaatact cgatttgata aaattcttat
       61 ttcctcacca aaagaatgga tgaaccacgc tgaggataat attaaaaagt atatttctga
      121 tgatcgtatt gtagtcattg aaggcggaga agaccgcaat gaaacaatta tgaatggtat
      181 tcgttttgtg gaaaaaacat atggcttaac agatgatgat attatcgtga cgcatgatgc
      241 tgttcgtcca tttttaacac atcgtattat tgaagaaaat atagatgctg cacttgaaac
      301 aggagcagta gatactgtta ttgaagcact tgatacaatc gttgaatcaa gcaatcatga
      361 ggtgattaca gatattccgg tcagagatca catgtatcaa ggacaaacac cgcaaagctt
      421 caatatgaaa aaagtattca atcactacca aaatctaaca ccagagaaaa aacaaattct
      481 aacagatgca tgtaaaattt gtttgcttgc tggcgatgat gtgaaattag ttaaaggtga
      541 aattttcaac attaagatta cgacgcctta tgatttgaaa gtagcgaatg cgattattca
      601 ggagcggata gccaatgatt aatcaagtat acagacttgt gtcagagaga cagtttgaag
      661 ttgccaatgt ggacgaatca ttaacaggtg atgtggttgt tgttcgaccg actcatttat
      721 ctatttgtgc ggcagatcaa cgttactata caggttctag agggaaagaa atgttatcta
      781 aaaaacttcc aatggcgctt attcatgaag gtgttgggga agttgtttat gatgcaacga
      841 aagaatttaa accaggtaca aaagttgtca tgattccaaa tacaccattt gagaatgatc
      901 cagtcattgc tgagaactat ttacgttcga gtaaattccg ttctagtggt tatgatggtt
      961 taatgcagga ttatgtgttc atgcgtcgtg atcgtgtggt ggcactgccg gatgatatta
     1021 acatgaaagt agctgctttc tcagaactga tttccgtggc agttcacgct attttacgct
     1081 ttgaaggtaa aagtaatgct aaccgggaat ctttcggtgt gtggggtgat gggaacttag
     1141 gttttatcac ttctttacta ctaaaaaatt ggtaccctga tagcaaagtt tacatttttg
     1201 ggaaaacacc atataaatta gacttctttt cttttgtgga tggtgcttat gcaattgatg
     1261 atgttccggc tgatttagtt attgatcaag cattcgaatg tgctggagga atgggtagtc
     1321 agtatgcggt gagtcaaatt attgatgtca ttaaaccaga aggaaccatt tccttacttg
     1381 gtgtttcgga gtatccgatt gaatttaatt cacgtatggt acttgaaaaa ggactaaccg
     1441 tttatggaag tagtcgtagc ggtcgtgttg attttgagaa aacagtggag ttcttatcaa
     1501 ccaataaacg tggggtagaa tatctgcaaa atcttgttgg ggaagttcat acagttcatt
     1561 ccattcaaga tgtaatcgaa gcgtttgaag ctgatttacg cagtccatgg ggcaagagcg
     1621 ttatggagtg gaagatataa taaaacattg gggagtttag gctgtaagct aatgaatttg
     1681 tttgctaaag tattttagga agcaagaaaa tcgaatgtaa gtattcgatg gtcatttgct
     1741 aaatccttaa cttcccagct tttatatgga gagggaaaaa gaatgaaatt tgctattata
     1801 atgccttttt acaatgccga aaaaaggtta gcactatcca tagatagtat aattaagcag
     1861 tcttacagct ttttgaagca tgtggaagta ctgcttatta atgatggaag cacggatgga
     1921 agtggcgcta tcgcaaatcg ttacgctaca aaatatccta acaatattcg cgtgttgacc
     1981 gttccaaatg gtggaccggc aaaagcgcgt aatatcggaa tacataatgt aagtgaagat
     2041 actgattttg ttggtttttt agacgccgat gatataatgt cagagaatat gttagcgagt
     2101 atagttacat ttctaaatga gtctaacgtt tctatgcttg tgccagcttt ttattactta
     2161 gatgattttg gaagtaagaa aaaaatttca ccacataaat taaattaccg ttttgcgaat
     2221 ggaaatcgag ttgctgatat tgaaaaagaa ccggaagcaa ttcattttta tattggcggt
     2281 acttttttac gttatgattg tttgaaagaa tttacttttg atgagtcgct ttattttgcg
     2341 gaggatcagt tattaattac ccagttctta ctgaaatatc ggagctatgg cttgattgcg
     2401 gatgcggggt attattacta tcgtgatcta aagcaaaaag gttctttagt aagttcgtct
     2461 tggaaaaaac cagaacgata cacgcctttt ttgcagaaag tatatcaaac ctatttaact
     2521 gactcgaaag aaatatatgg caaagtgatt ccctatgtga agtatctaat tgcgtaccat
     2581 gcaaaattgt ttttttataa agaaaatact tatttccggg aagttttaag cgagtcggag
     2641 caagcgattt tcgtgcaaga attacaaaag attttgcagg aagtcggagc aagtacgatt
     2701 atggaattag acacacctct cgtagtaaaa gaaatgatgt gctcgatttt gcaaaatgga
     2761 tggccgctgc aatttgaaac ggctgaaaaa caagatattc cacttgtgac agtaaaagaa
     2821 aattatcgta tcggcaaaac agtcgcgatt gaattacttc tagaagaagc ggatattcat
     2881 gacgtgaaat gggttgctcg cacgtctttt aaagaaatgc cagctcggtt agtcaaacga
     2941 aaagagaatc aaactatttg ggatgtcgtt gtcagagaaa aaggcacagt agaaaaagct
     3001 gtatttaaat taaaaccgta tcaaacgaaa gcgcgtcttt tttatcaaga tgaggaaaag
     3061 gatacgccta tcgccgacat aaatatcata agtagcatct tagggaaatt aaaacgaaat
     3121 cgagcgttaa agcgaaagtt taaacagggg ggagtatcct gatgaagtta gtacaaaaag
     3181 tgtattattt gttgtttaga ttagtgggat ttttaccgcg aaaaaaagat ttagtgatat
     3241 ttgaaagctt ttcaggtaag caatatagct gtaatccacg ggctatttat gaatatatgg
     3301 aggagcataa tccggaatac gaattattat ggagtgttaa tccaaaattc gtggctgttt
     3361 ttgaagctta cggagttcct tatgttaaac gtttttctat tagctggtta tttaaaatgg
     3421 ggcttgctaa gtattggatt tctaatagta gacttccttt agaactacca aaaccgaaaa
     3481 aaacaatcta tgtgcaaact tggcatggaa cacccttaaa aaaattaggc gtggatattg
     3541 atgaagtgca cattccaggg caaacaacgg aacagtacaa agctgatttt gtaaaagaag
     3601 cacagaaatg ggactactta atttctccta atgcttattc tagtgctatt tttagacggg
     3661 catttggttt tactggagag atgattgagt cgggatatcc gcggaatgat attttattta
     3721 gtaccgataa agagctgaaa atagctaata ttaaaaaaga gctaaatatc ccagaagaga
     3781 aaaaagttgt tttatatgcg ccaacatggc gtgataatga tttttatgaa gctggaagat
     3841 ataaatttga tttaaaaatc gatatcgcaa aaatgcaaga aaaattgggg aatgagattg
     3901 ttttacttgt tcgcatgcat tatttagttg cggaacattt tgatttcacg caatatggtg
     3961 attttgtccg cgatgcttca aaccatgaag atatacgcga tttatactta gtgagtgatt
     4021 tgttgattac tgattattcc tctgtatttt ttgattatgc gaatttacag cgtcctatgc
     4081 ttttttatac gtatgatttg gcggaatatc gtgatacgtt acgtggcttt tactttgatt
     4141 ttgaaaaaaa tgctcctggt ccgcttgtgg aaacgaatga agaattaatg agtgaacttg
     4201 aaaaaatgct tgaaaatcca cctaaaatag aagacagctt tttggagcag ttttgtactt
     4261 gggaagatgg tcatgcagca gagaaaacag tgaaaatcgt ttttgctgaa aaataggtgg
     4321 tgggaatttt gaaagaagta gcaatttata tttatatgct tgctgttaag ataactggct
     4381 gtttggcgag gatttttcca gttaaacaaa aagtggtact gttagttagc tttccggaaa
     4441 attccactgc aattataaag caaatgaacg aaatgaaagt tacgccaaaa acggttgttt
     4501 tctatgatcc aagagtggat gtgaccggtt ttaattttga ttttatccaa ttaaagccaa
     4561 aaaaaatcaa gcactttatc tcgttaatgt tccatctgaa tacggcaaaa gttgtcatta
     4621 cggataatta tttcgtggaa ttagctggat taaaagaacg taaaaatgtg acgtgcattc
     4681 aaatttggca tgcgaatggg gcattgaaaa aattcggctg ggaagataaa gcagcgcaaa
     4741 aaagaagcgc gcgcgataaa aaaagatttc aagaagtgta cagatgtttt tcaaaagtgc
     4801 tcgtcggatc ggatgaaatg gcagcaattt tccaaaggtc gtttttacta gaagattcgc
     4861 atatgttgaa gctaggaatt ccgagaacgg acaatttctt caaccaacaa caattgaaag
     4921 aaaatgccga aaggacaaat accaaattac atctttccaa taaaaagaaa ttattatatg
     4981 cgccgacgtt ccgcgatgag gaacttcata gtactacgct tcatttagat atcgcgaaga
     5041 tgaaacaagc actcggaaat gagtaccaat taattttaaa attacatcca tctattagta
     5101 atgatttaga tgaagtagtg gatgattttg ttgtctatgc ggataaagaa acgccaatcg
     5161 agacgatact accagccgta gatatattga ttactgatta ttcatctatt ccatttgaat
     5221 ttgctttatt agaaaaacca atgatctttt tcacgtatga tttagaggaa tatgataagg
     5281 ctagaggttt gtcggatggc tttttagcaa cgattccggg gccattcgtt catacaacag
     5341 aggaactaat acaactaatt gagcaagaag cattcgattt agaaatggtt cgtgcttttg
     5401 cggcgaaatg gaataaatat tcagacgggc attctagtga gcgcttcgtt tcctttttga
     5461 aagaacagct agaaaagtag cactgctaac aagtagagaa atttttgttt tcttgatata
     5521 ctactaaaga aagtaggtgg gctgatgaag aaagtaatta catatggcac atttgatttg
     5581 attcactggg ggcatattcg tttattagaa cgagcaaaag ctttaggtga ttaccttatt
     5641 gtagccattt caaccgatga atttaatcga atcaaacaca aagaagcata ccataacttt
     5701 gaacatcgca aattaatttt agaggcgatt agatatgtcg acgaagtgat tccggaaagt
     5761 aactgggaac aaaaattaga agatgttaaa aatcgtgata ttgatatttt tgtgatgggt
     5821 gatgattggg aaggcgagtt tgacttctta aaaccttatt gtgaagtcgt ttatttacca
     5881 cgaacagacg gtatttctac ttctaagatt aaagatgatt taaaatagtc gtagcacaaa
     5941 acaggcagac cagtaatgtt caattattag gtggtgggct tgttttgtgc tattattatg
     6001 tataaataat aacgcaaaga actagttatg ataggagcag aagaaatgac aaatttattt
     6061 caagatgata gtctaacgct gcatacagac ttatatcaac taaatatgat gaaagcgtat
     6121 tttgacgatg gacttcatga gcgtagatcg gtatttgaag tgtttttccg agatatgcca
     6181 tttgattcgg gttttgttgt gtttgcgggg ctagaacgaa ttattcatta tatgcaaaat
     6241 ttacgtttta cagaaacgga tattgcttat ttacacgacg aacttggttt tgaaggacct
     6301 tttctagaat atttacgtaa ttttaaattt aaaggaaata ttcttgctgc gaaagaaggg
     6361 gaatttgttt ttaaaacaga gccaatcctt caagtagaag caagcttggc ggaagcacaa
     6421 ttaattgaaa cagctttgct taatattgtg aatttccaaa cgctgattgc aacaaaagcg
     6481 gcgcgaatcc gttctgttat tgatgacgaa acgtttgcag aattcggtac aagacgtgca
     6541 caagaaatgg atgcggctat ttggggcaca cgagcggctt acatcggcgg ttgtgattcg
     6601 acgagtaatg ttcgcgctgg aaaaattttc ggtattcctg tgtctggtac gatggcacat
     6661 gcgatggttc aagcttatcg cgacgaacta gaagcattta gaagttacgc aaaaacgcat
     6721 tttgattcga ttttcttagt agatacatac gatacgctaa aatctggcgt accaaatgcg
     6781 attaaagtgg cgaaagaaat gggcgataaa attaacttta tcggcattcg tttagatagc
     6841 ggggatatgg ctttcttatc taaaaaagca cgccaaatgt tagatgaggc tggttttaca
     6901 gaagcaaaaa tctttgcttc gagtgactta gacgaacata ctattttatc gttaaaagcg
     6961 caaaaagcaa aaatcgattc ttggggcgtt ggcacaaaac taatcaccgc ttacgaccaa
     7021 ccagcattag gtgccgttta caaaatggcg gcaattgctg atgaaaatga tattttacaa
     7081 gattcgatta aactttcgag taacaccgaa aaagtgtcga ctcctggtaa aaagaaagtt
     7141 taccggatta ttacgaatga agatggcttg aaagcggaag gcgattatat tgctttagcg
     7201 gacgaatcac tcgaaaatgt ggataaacta acgatgttcc acccagttca tacgtatatt
     7261 atgaaaacag tcgagaactt caccgcgcgt gagctacttg taccgatttt ccaaaacgga
     7321 gaacttgtat atgatatgcc ttcactagat gaaattaaag catataaaga agagaacttg
     7381 gcgctacttt gggacgagta caaacgaaca gttcgtccgg agcaataccc agttgattta
     7441 agtgtaaaat gttggaaaaa taagatgcgt aatatcgaaa aggtacgtaa aagtgtccag
     7501 cttcattcac cagttgaact agatatgccg ttttaggagg aattataatg gaaatcagag
     7561 aaagaatttt agcagatatg caagtggcag aaacgattga tgcacacgaa gaaatccgaa
     7621 aaagtgtcga gtttttaaaa gcatatttaa aaaagaatac gttcttaaaa agctttgttc
     7681 ttgggatttc tgggggacaa gattcgactt taacaggaaa actagcacag atggcgataa
     7741 gcgaaatgcg agcagaaacg ggtgacgatc agtaccaatt cttcgctgtg agcttgccat
     7801 acggaacgca actagatgaa tcggaccgtc aagatgcact gaactttatg gaaccagata
     7861 atcgtttaac cgtaaatatt aaagcttcag tggatgcgag tgttgcggcg cttgcggaag
     7921 cgggagtgga actatctgat ttcgctaaag gtaacgaaaa agcgcgcgaa cggatgaaag
     7981 tacaatacgc aattgcagcg atgcataaag gcgtagtagt tggaaccgat cactccgcag
     8041 aagcagttac tggcttttat acgaaatacg gcgacggtgg aacggatatt aatccactat
     8101 ttcgcttgaa taaaagacaa ggcaaggcgc ttcttaaaga gcttggctgc ccagaacatc
     8161 tatatttgaa aaaaccgaca gcagatttag aagataataa accggcactt cctgatgagg
     8221 tcgcgcttgg tgtgacttat gaccaaattg acgattactt ggaaggtaag gaagttccag
     8281 cagatgctgc agcaaaaatt gagaactggt ttattaaaac cgaacataaa cgccatatgg
     8341 caattactat atttgacgat ttctggaaat aggaggctgt ttaaatgaaa gttggttatg
     8401 gtttattaac tgcattttat acacatccag gagaaaaaga taatttagtg aaaattttgc
     8461 ttgaagcggc tgaaggattg gatgattaca acacgtgtat tcagtatatt gtcagcgaat
     8521 ctgaaaccga gccagacacg gtgtttgttt ctgaaatttg ggtcgacaaa gggcatcatg
     8581 cagcatcact tgataaccca gctgtacaag aaaccattgc acgcgcaaaa ccgatgataa
     8641 aagaaataaa acaaatacaa gaattagaca tactcggtgg aaaaggcata taattttaac
     8701 aacaagaatg attctggggc tctcctggaa tcattttttg gagggatgag aaatgaaaac
     8761 gttgatgatt gtttgtgctg gtggtgcgac gtcgagttta atggcgcaaa atgtcgtgaa
     8821 aagcgcgacg tcagaaggaa tggacgctgt tctactattt ccagatgatg tgaaatataa
     8881 agatagtttt cgtgaaaaat acagcgagcg ggatttggtt gtcgtgatgg gaccagtcgg
     8941 cgcaattaca gctgggaaat tccgtgatta taaagaacag gttgacgcgg ttttagtagc
     9001 accacaagtg aaatatatgt acaaaacagt ggaggaagta ttaggcgaac taagtattcc
     9061 ttgcgctaat attgattcac tcgatttcgg tcggatgcgt ggagataaga ttctcacgca
     9121 aggtctagcc ttaatggatg cgaaaaattc caaataaggt gttgcaactt tagaggggaa
     9181 acgttaaaat gaaagaagat gaaaaggaca agtgatttgt ccttttctta tattattgtg
     9241 aagtaaccgc gattttgcgg tttcatttta tagataaggg tggttttgtt taaaattatg
     9301 aaagacttta ccgagcaaga gaaaattatc gttctagatt ttggtagtca gtacaatcaa
     9361 ctaattacgc gccgcattcg tgagttcggt gtgtatagtg aattacatcc gcatactatt
     9421 acagttgaag aaatgaaagc actaaatcca acggggatta ttttttcagg aggacctaac
     9481 agtgtgtatg acgaagatgc cttccgcgct gacgaaagaa tctttgacat gggaattccg
     9541 attttgggaa tttgttacgg catgcaatta atgacaacgc acttcggtgg caaagtagaa
     9601 cgtgcgaaag accgcgaata cgggaaagcg gacattcacg ttgagaagcc aaaccgttta
     9661 tttgctggac taccaaccga tcaagttgtt tggatgagtc acggcgattt agtcgttgag
     9721 gagcctgctg gttttgaagt aacaattact agtaaatctt gcccaattgc aggtattgcg
     9781 gacgaagaac gttcacttta cggcgtgcaa ttccacccag aagtacgtca ctctgtttac
     9841 ggcaacgaat tactgaagaa ttttgcatta aatgtttgtg gctgtaaagg cgactggaca
     9901 atggagaact ttagtgaagt agaaatcgct aaaatccaag aaatcgtagg cgacaaaaaa
     9961 gtcttgcttg ccctttctgg cggcgtagat tcctctgttg ttggtgtgtt aattcataaa
    10021 gcaatcggcg accaactaac ttgtattttc gtagaccatg gccttcttcg caaaggggaa
    10081 gctgaccaag taatggcaac attacaaggc gaattcaaca tgaacatcat caaagtagat
    10141 gcgaaaaaac gcttcatgga caaacttgct ggcgtttctg acccagagca aaaacgtaaa
    10201 atcatcggta acgaattcat ttacgtattc gacgatgaag ctaacaaact agacggcgta
    10261 gaattcctag ctcaaggaac actttacaca gacatcatcg aaagtggtac agcaactgcc
    10321 caaacaatca agtctcacca caatgtaggc ggcttaccag aagatatgca atttaaacta
    10381 atcgaaccat taaatacact tttcaaagat gaagttcgcg cactaggaac agaacttggc
    10441 atgcctgacg caatcgtttg gcgccaacca ttcccaggcc caggcttagg aatccgcgtt
    10501 cttggcgaaa ttacggaaga gaaattagag attgtccgcg attctgatta catcttgcgt
    10561 gaagaaatca aaaacgcagg tctagaacgc gaaatctggc aatactttac tgctcttcca
    10621 aatatccgta gcgttggtgt tatgggtgat ggcagaacgt atgaccatac tgtggttgtt
    10681 cgtgcggtga cgagtattga tggtatgaca gccgattggg cacgtattcc gtgggatgta
    10741 ctggagaaaa tttcggtacg gattgtgaat gaagtggatc acgtgaatcg tgttgtttat
    10801 gatattacga gtaaaccacc agctacggtt gagtgggaat agtaaacaaa gccctaaaac
    10861 ctcagtaatg atgaggtttt agggcttttt ctatgtcgag tgataacagt ttgataacag
    10921 tttatattat cgtagtaatt ttacggataa tattctatca aatttta
//
LOCUS       DASDYO010000108        10740 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.108, whole genome shotgun sequence.
ACCESSION   DASDYO010000108 DASDYO010000000
VERSION     DASDYO010000108.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10740)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10740)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10740
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.108"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..91
                     /locus_tag="U0290_002312"
     CDS             <1..91
                     /locus_tag="U0290_002312"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465468.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ferredoxin"
                     /protein_id="HEM2302348.1"
                     /translation="IPEDLVETVIDAEFACPSLSIKVSDSSFH"
     gene            complement(155..6166)
                     /locus_tag="U0290_002313"
     CDS             complement(155..6166)
                     /locus_tag="U0290_002313"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734412.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bacterial Ig-like domain-containing protein"
                     /protein_id="HEM2302349.1"
                     /translation="MIKSLYIRRSLMMLITSLLVVSQLNLTVFQAFAEEKGEEPLSYE
                     VQEELSKDKKKAKLKIKATSNNNQVEILSIETPDGNKIEGKEAEYTAEKNGDVNFIIS
                     YKENIEGKETEIKTFKASYEVKNLIIEKEEANQSKDSVKQNETKAPLKNNQLKSGNDA
                     TVTLNIPAYDGTAWANGDIKDVNVTVDFSNSTSTSKEVEFTLPDGMRFVSIPVPSSFQ
                     VSTGVDSGVINRLSAGDPIGTAITSVTIPNKETTYDKATFGTVNYKLTPGTEKVSFNF
                     SVRVDANKYYGATDLKAPIKVEAFVGDNKMAIASEEKAIRAEGNKVVGYANQTHVSTM
                     FRNWYKSFRTPDVLASTDDEDSYAYTKSYSVVNGMNQVDERGTNIFSPKNVSTTLYYP
                     EGMEYVGVVNEKYALLNENANTTITHYPEENKVVFDFKQQNFKGVTDTVYAIKYKIPK
                     GTPAGTYTAPKVPHAVITTYDDKVFESDALTNNSTDLTTKATLDACRVVDSTENKMAL
                     IVGNKNINPDNETWAGNVRINNKDTAGTKTNQVFQIEFDSNWEASIVNIPFDGNRKDN
                     DITNIQYKTNFDDTYQTYNGNLPKNSMKNIAILEADAVGLQPGEYFTEVKANVGDFST
                     GYTSYSESGGFGEESTNSYGIVKPGISSVQFKVSIWDEADEVNTKVSGTSVYSVADNI
                     TTAANGTANFYNEQGQVIKTAGAGDKFTTKATLVLFNYPYGTRTVLNDPEVYLRQLDG
                     TKILPSSIKLTDQDGEEIEFSIKIETAKNGEKVYVLKTKDATVGRYVGYPSKHKFLNL
                     SYDTTIDVTLDKSLHTDIQQLLAWGGPNVKAATAANTFMDTGLDVNQNGIENERLLSA
                     NSSTLSVPKQDAVTVETFLNLAGEGAKASYVEGDDSTVSYFTPGTEADYTVRVTNTST
                     GIASAFELYIPIPKTGQNFGSKFQTETFKWDMKLNDAVQLTDEQKAQFDISYATEANK
                     NNYESESVYSAVPSDYGKVNMVRIKVKTKIDPGETQTIKVPLKVDETFNSATEGNKIS
                     ERDVYNPYYRVTTNAYSGTLPGTKVGAELIILEASGFLFQDKDANGLYEKAQGDTALA
                     NETVELYKWNENTSNYEPFLKNGEPVSVKTNADGKYTFNYNLNLSYGKYAVKFPERAG
                     NQFTLKQVGQDNTINSTVSNKGTDKGWVKEIDPAQPVSQNINAGYMEYAPDNDLKVNL
                     SAKIVQAGKSLKVTLPKVRATSGEAVEDTIEPSFFHNIQAITDGYKWTSNDTTLATTQ
                     TANDGSGIIVGISAGNKAIATTDIGITIKDIFDTEKKSTAPVYITEPSATIDQKEGLI
                     LGAMNFSLEYKDSNKLTETEAITLAKTASFEEVKTGVLSTAQDCTSSVKVDAKQLKAI
                     QEGSNQGGTYPLTYQVAKNGKTAEVVIQVKVEKDLTTVNVHDSILYLGDTWTATDNFD
                     SALNKVGETVPFGDIQVEGSVDTNTAGIYSVTYTYKGVSKKAKIEVKENLTEINAHDS
                     TIYTGDTWRAGDNFDSGLDKDGNALSLKDLTVIGTVNTNLAGVYTITYKYEDTVSSIT
                     VTVKENKKGINGHDSSIYVGEAWTAADNFDNAVDKDGKPVSFADIKVKEEPKVDVNKA
                     GRYQITYNYDGASTTVTLTVKEIKTAINAHDSILYIDDNWSAKDNFDSARDKDGNIVS
                     FNDVQVLGTVDTSQAGTYPITYVYAGITKTIQVIVKHPKTAVRAHDSVIYVGDNWKAQ
                     DNWDNTLDKAGQKVKWKDITVKENPAVDVTKPGVYEVTYSYDGISATINVTVKPRKTT
                     VKIHDSSFYAGNSWNAKDNFDYATNKAGEKVAFKDITVAGKVDSKTPGTYEISYVYDG
                     VKAVAKVTVLKNHSILMVKDRVIKVGEKWNAKDSFIQATRRDGKNIPFSQVKVQGKVN
                     LNKAGKYQVIYSVDPNEGTEDAGKQMLSVTATIQVENRGDAGLQDNEPRSVKDNNQRA
                     ANSNDIKLIPKTGDQTNQWVLWAGLCLTGLAMLLWGFALRRRKVK"
     gene            complement(6432..7043)
                     /locus_tag="U0290_002314"
     CDS             complement(6432..7043)
                     /locus_tag="U0290_002314"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ECF transporter S component"
                     /protein_id="HEM2302350.1"
                     /translation="MKNYSMKVFVSVAVLGTLAFILMMLQFPLLPSAPFLKLDFSDIP
                     ALIGGLLFGPLAVILVELIKNVLLYIVSGSPVGVPIGEISNFINGIVYVLPIYYLFHW
                     FRSTKGMVFSTAIGTLVMTVVMSIFNYFILLPFYIKLGGLPADTDVAWLVTYAIIPFS
                     LLKGVIVSAVFLLLYSRLKKWIAKNQTVKERRKFEKKQQEVSH"
     regulatory      complement(7233..7355)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00050"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="FMN riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="flavin mononucleotide"
                     /db_xref="RFAM:RF00050"
     gene            complement(7485..8003)
                     /locus_tag="U0290_002315"
     CDS             complement(7485..8003)
                     /locus_tag="U0290_002315"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA thioesterase"
                     /protein_id="HEM2302351.1"
                     /translation="MEKRQTKFCKESLVIKTSRVFPSDTNNHNTLFGGRLMTYIDDTA
                     SISASRHCRTEIVTASTDSVDFLKPIKNDHSVCLESYVASTGRSSMEIFVKIIAENLK
                     TGERYLAATSFLTFVALDADGKTVEVPLVKPETEEQKRIHAGAEARSIARKIRLKENQ
                     SLAESLSTDIPW"
     gene            complement(8019..9809)
                     /locus_tag="U0290_002316"
     CDS             complement(8019..9809)
                     /locus_tag="U0290_002316"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465471.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEM2302352.1"
                     /translation="MKIWNSIVGKIWSTIILLLIGILVISGFLVAMIYEKNNITQITN
                     ELEDKTASIITVMQENNEVISAENNNDSALILLDDTMGVIIEQNGKSVYQSQSPDTIS
                     SASANKLIQDKTLDKALEKDNSVTMKYNFKTEKSSLPVEISAQKFKLANGETGVVYVY
                     QSYHDILKVNEKTMSTLIISGIIAIVITSILSFVFSSRMAFPLREMKKIAIAVSKGNF
                     DNRVPTYTHDEIGELGVAFNDMAKQLKYNVSALRQEKEQLSNILVGMADGVIKFSVDK
                     TIILSNPPAEEFLHNWFFSPENTEKVLIPVALNELLNDTLEKKESQVGEITFADHTYV
                     AILTLLYTGEHVRSVVAVIRDMTEEKQLEKMKSDFVNNVSHELRTPISMLQGYSEAII
                     DGVAQSDEEVREFAQIIYDESLRIGRLVNDMLDLARMEAGFNQMDNQKLPLAPLLRKV
                     ISNFDVLAKENYVELGLELETPDLEYSYDPDRMEQVLINLIMNAIRHTGKEGYDGKVI
                     LKQTIDEARSNLVITVSDNGSGIAEEDIPYLFERFYKVDKARKRGKAVGTGIGLAIVK
                     NIVEAHNGKISVESELGKGSDFIITLPLYK"
     gene            complement(9910..10626)
                     /locus_tag="U0290_002317"
     CDS             complement(9910..10626)
                     /locus_tag="U0290_002317"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465472.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2302353.1"
                     /translation="MSEQVRVLVVDDEDRIRRLLKMYLERENYRIEEASDGDQALSMA
                     LNNNYEVILLDLMMPGKDGIEVCRELREFKSTPVVMLTAKGEEANRVQGFEVGADDYI
                     VKPFSPREVVLRVKAVLRRAKQSSEESAGGTPGDIITFPHLKIDNEAHRVIVDGKEIG
                     LTPKEYDLLYYLARSPDKVFDRESLLKEVWRYEFFGDLRTIDTHVKRLREKLHDVSED
                     AARMIVTVWGLGYKFEVPED"
BASE COUNT         3103 a         2205 c         1651 g         3781 t
ORIGIN      
        1 aatccccgaa gacttggttg aaacggttat tgacgcagaa tttgcctgtc cttcgctttc
       61 tatcaaagtt tccgatagtt catttcatta ataatacacg aaaaaggaag gtttccgctg
      121 tttggaaacc ttcctttttt atttttaata aatattattt cacttttcgt ctccttagag
      181 caaatcccca tagaagcatt gctaaaccag tcaaacaaag gccagcccat aaaacccact
      241 gatttgtttg atctcctgtt ttaggaatga gtttgatatc gttggagtta gcagcgcgtt
      301 gattgttatc ttttacgctt cgtggttcat tatcttgtaa ccccgcatct cctctatttt
      361 caacctgaat agtagcagtt actgacaaca tttgtttccc tgcgtcttca gttccttcat
      421 ttggatctac tgaatatata acttggtatt tgcctgcttt gttcagattt acttttcctt
      481 gcacttttac ttgtgaaaat ggaatatttt ttccatcacg tctagttgct tgaataaagc
      541 tatctttcgc gttccatttc tcgcctactt ttatgacacg atctttcacc atcaaaatag
      601 aatggttttt caaaacagtg accttagcaa cagctttcac accatcgtat acatagctaa
      661 tttcatatgt tcccggtgtt ttgctatcaa ctttacctgc gacagtaata tctttgaatg
      721 ctactttttc acctgcttta ttcgttgcat agtcaaaatt atctttcgca ttccaactat
      781 ttccagcata aaaactacta tcatgaattt ttacagtcgt ttttcttggt ttcacggtta
      841 cattaatcgt ggcagaaata ccgtcataac tgtaggtaac ttcatagacg cctggctttg
      901 ttacatccac ggcaggattt tctttgacag taatatcttt ccatttcact ttttgaccag
      961 ctttatcgag cgtattgtcc caattatctt gagctttcca attatctcca acataaatca
     1021 ctgaatcatg ggctcgcaca gctgttttgg gatgtttaac aattacttga atggttttgg
     1081 taattccagc ataaacatat gtgatcgggt atgttcctgc ttgacttgta tcaacagttc
     1141 ccaagacttg tacgtcatta aaggatacta tatttccatc cttatcccta gcgctatcaa
     1201 aattatcttt tgctgaccaa ttatcatcaa tatacagaat agaatcatgt gcattaatag
     1261 ctgttttgat ttctttcaca gttaaagtaa cagtagtcga ggcaccatca taattatagg
     1321 tgatttgata tctgcctgct ttgttgacat ctactttagg ctcttctttc acttttatat
     1381 cagcaaaaga aactggcttc ccgtctttat caactgcatt atcaaaatta tccgccgctg
     1441 tccatgcttc tcctacatag attgacgagt catgcccatt aattcctttt ttattttctt
     1501 ttacagtaac agtaattgaa cttacagtat cttcatactt atacgtaatc gtatatacgc
     1561 ctgctaggtt tgtgtttact gttccaataa ccgtcaaatc ttttagactc aaggcattgc
     1621 catctttatc aagtccactg tcaaaattat cacctgctcg ccaagtgtcg ccagtataaa
     1681 ttgtcgagtc gtgtgcatta atttctgtca aattttcttt aacttcaatt ttagcttttt
     1741 tagacactcc tttgtacgta tatgtgactg aatagattcc tgctgtatta gtatcaacag
     1801 atccttctac ttggatgtct ccaaatggaa ctgtttcacc tactttgttt agcgcactat
     1861 caaagttatc agttgccgtc catgtatcac ccaaatacaa aatagaatca tgtacattga
     1921 cagttgttaa atctttttca actttcactt gaataactac ttccgctgtt ttcccatttt
     1981 tagcaacttg ataggtcaac gggtaagttc cgccttggtt agagccttct tggatagctt
     2041 ttaattgctt ggcatccact tttacggaac tagtacaatc ttgtgcagta gaaagtacac
     2101 ctgtcttcac ttcttcaaaa ctagctgttt ttgctaaagt aattgcttcc gtttcagtta
     2161 gcttatttga atctttgtat tctaaactaa aattcattgc gccaaggata agtccctctt
     2221 tttggtctat cgtagcactt ggctcagtta tatatacagg tgcagtagat tttttctctg
     2281 tatcaaaaat atctttgatt gtaataccaa tatcagttgt tgcgattgct ttgtttccgg
     2341 cagaaatacc aacaattatt ccagaaccat cattagcagt ttgtgtagtt gctaaagtcg
     2401 tatcattgct agtccatttg taaccatctg taatcgcttg aatattgtga aagaacgacg
     2461 gctcaatcgt atcttctacc gcttctccac tagttgctct tactttcggc aatgttactt
     2521 ttaaactttt accagcttgt acgattttgg cgctaagatt aactttaaga tcattatccg
     2581 gcgcgtattc catgtaacca gcattaatgt tttgtgatac cggttgagct ggatcaattt
     2641 cttttaccca acctttgtct gtacccttat tggatacagt actatttatc gtattatctt
     2701 gccccacttg tttcaaagta aactgatttc cagctctttc tggaaacttc actgcatatt
     2761 tcccgtaaga taaattcaaa ttgtaattaa aggtgtattt tccatcagca ttagttttaa
     2821 cgctgactgg ctcaccattt ttcaagaacg gctcatagtt agaggtattt tcattccatt
     2881 tataaagttc aacagtttcg tttgcgagtg ctgtatctcc ttgagctttt tcatacaaac
     2941 catttgcatc tttatcttgg aaaagaaaac cgcttgcttc taaaataatt aattctgctc
     3001 caactttagt tcctggtaat gttccagaat aagcattcgt agttacacga tagtaagggt
     3061 tatatacatc gcgttcactt attttatttc cctctgtagc agaattaaaa gtttcatcta
     3121 cttttagtgg aactttgatt gtttgtgttt caccgggatc aatctttgtc ttcactttga
     3181 tacgaaccat gttgactttc ccataatcag agggaacagc gctatagaca ctttctgatt
     3241 catagttatt tttatttgct tctgttgcat aactaatatc aaattgtgct ttttgttcat
     3301 ctgttaattg cacagcatca tttagtttca tatcccactt aaatgtctcc gtttggaatt
     3361 tagaaccaaa attttgtccg gtctttggaa ttggaatata gagttcaaaa gcacttgcta
     3421 taccagtaga tgtatttgta acacggactg tataatccgc ttccgttcct ggtgtaaaat
     3481 aggaaactgt actatcgtca ccttctacat aagatgcttt tgctccttct ccagccaaat
     3541 ttaagaatgt ttctactgtg actgcatctt gctttggaac acttaaagta ctgctattcg
     3601 cagaaagcag acgttcattt tctattccat tttgattgac atcaagacct gtatccatga
     3661 aagtattcgc agctgtagca gcctttacat ttgggcctcc ccaagcaaga agttgttgga
     3721 tgtcagtatg aagactttta tctaatgtta catcaatcgt agtatcataa cttaaattta
     3781 aaaatttatg tttagaagga taaccaacat acctaccaac tgttgcatct tttgttttta
     3841 aaacatacac tttctctcca ttcttggcgg tttctatttt aatagagaac tcgatctctt
     3901 ctccatcttg atccgttaac ttaatagaag acggaagaat tttagtacca tccaattgac
     3961 gaagatacac ttcaggatca ttaaggactg tacgtgtccc gtatggatag ttaaataata
     4021 ccaatgtagc ttttgtagta aatttatctc cagctccagc agttttgatt acttgtcctt
     4081 gttcattata aaaattagct gttccgttcg ccgctgtcgt aatattatcg gcaacactat
     4141 aaacagaagt acccgagact ttcgtattta cttcatctgc ctcatcccaa atggatactt
     4201 taaattgaac agaagaaatg cctggtttga caataccata ggagtttgtt gattcctcac
     4261 caaaaccacc agattctgag tagcttgtat atcctgtaga aaaatcgcct acattcgctt
     4321 tcacctcagt aaagtattct cctggttgaa gtccgactgc atcagcttct aagatagcaa
     4381 tatttttcat actattctta ggaagattcc cattgtatgt ttgataagta tcatcaaaat
     4441 tagttttgta ttgaatatta gtgatatcat tatcttttct attcccatca aatgggatgt
     4501 taacaattga agcttcccag tttgaatcaa attcaatttg gaagacttga ttagtttttg
     4561 tcccggcagt atctttatta ttaattcgaa cattccctgc ccaagtttca ttatctggat
     4621 taatattttt gtttcccacg attagtgcca ttttattttc ggtcgaatct acaactcggc
     4681 aagcatctaa cgttgcctta gttgttaaat ctgtagaatt gtttgttaat gcatcagatt
     4741 caaatacttt atcgtcatat gtcgtgatga ctgcatgtgg cactttagga gcggtatatg
     4801 ttcctgctgg cgttcctttt ggtattttat attttatcgc atataccgta tctgttactc
     4861 ctttaaagtt ctgttgttta aaatcgaaca ccactttatt ctcttccgga taatgagtaa
     4921 tcgtagtatt agcattctca tttaaaagtg catatttttc atttactacc ccgacatatt
     4981 ccataccttc tggataataa agggtagtcg agacattctt aggtgaaaag atattagttc
     5041 ctctttcatc tacttgattc attccattta caacagagta actttttgta tatgcataag
     5101 aatcttcatc atctgtactc gctaatacat caggtgttct aaaagattta taccaatttc
     5161 tgaacatagt acttacatgt gtttgattag cataaccaac cactttattt ccttctgcac
     5221 gaattgcttt ttcttctgaa gcaatcgcca ttttattatc tcccacaaaa gcttctactt
     5281 taataggggc ttttagatca gttgcaccat agtatttatt agcatctaca cgaacagaaa
     5341 agttaaaact tactttttct gttcctggag taagtttata attaactgtc ccgaaagtag
     5401 ctttatcgta ggttgtttct ttgtttggaa tagtaacgga tgttattgca gtaccaatcg
     5461 ggtcccccgc acttaaacga tttatcaccc cagagtccac acctgttgat acttgaaaac
     5521 tgctgggaac gggaattgat acaaatctca taccgtctgg cagtgtgaat tccacctctt
     5581 tactagtaga tgtactatta ctaaagtcta ctgtaacatt aacatctttg atatcgccat
     5641 ttgcccaagc agtaccatca taagcaggaa tatttaatgt gacagtagca tcattacctg
     5701 attttagttg attattcttt agaggtgctt ttgtttcatt ttgtttaact gaatcttttg
     5761 attggttagc ttcttctttt tcaattatta aattttttac ttcataggaa gctttaaatg
     5821 ttttaatctc tgtttctttt ccttctatgt tttctttata gctaataata aaattaacat
     5881 caccattttt ttcagccgtg tactcggctt cttttccctc aattttatta ccgtctggtg
     5941 tttcaatact tagaatttca acttgattat tattagatgt tgctttaatt ttaagctttg
     6001 ctttcttttt atcttttgaa agctcttctt gaacttcata agaaagtggt tcttcgcctt
     6061 tttcttctgc aaatgcttga aaaaccgtta aatttagttg acttactact agtaaacttg
     6121 ttattagcat catcaaggaa cgacgtatgt acaacgattt tatcatatta gttttcctcc
     6181 ttctcatatt ctggttgttt ttattaacaa atctccaaga gataatttaa tattatcaga
     6241 cgattttatc gagtgtacat agtcgcaaaa caccttatta aaaaaaacag cactattcgc
     6301 aaattcatac aaatatttgt cacatcaaaa gcacgtttca gacacattta agacacaatt
     6361 aattcgcaaa agctgccatt ttagaagaaa aataaaaaac cactctttat tatagagtgg
     6421 ttttggataa attaatggct aacttcttgt tgcttttttt caaatttgcg ccgttctttt
     6481 acagtttggt ttttagcaat ccattttttt agtctagagt atagtaacaa gaatacagca
     6541 ctaacaatga ctccttttaa taaactgaat ggtataatcg catatgtgac taaccaagca
     6601 acatctgtat ccgccggaag tccaccaagt ttaatgtaaa atggtaataa aatgaaataa
     6661 ttaaatatcg acatgacgac tgtcattact aacgttccaa ttgctgttga aaacaccatt
     6721 ccttttgttg aacgaaacca gtgaaataaa taataaatcg gtaatacata aacaatacca
     6781 ttaataaaat tggatatttc tccaatcgga actccaactg gactacctga cacaatataa
     6841 agtagcacat ttttgattag ttctactaaa atcactgcga gtggtccgaa taataagcca
     6901 ccaatcaaag ctggaatatc actaaagtca agctttaaaa atggtgcact cggtagtagc
     6961 ggaaattgta gcatcattaa aataaatgct aaagtaccaa gaaccgccac acttacaaaa
     7021 accttcattg aataattctt cattgtcatt tctcccttga tgttcaccaa gaagcgagtg
     7081 acatcactag acgaatgcaa cccaagcaaa taaaaaacct caactgaaaa gagttgaggg
     7141 agagtttgtg aatgaataaa caagaaccgg atactcaaat aagcatcaca gcttgctaac
     7201 acatgctcgt gaagacaaac gaaaaggtct gccaacatct tctcccatcc agactatact
     7261 gtcggtcctg gaattacacc agagtcaact gctaaaaaag cagatcgtgg actttaacca
     7321 ccggtcggga attgcaccct gccccgaaga tgaacgaata ttttattaca attttcattt
     7381 taccatgaaa aaaatttttg gcaagcactt ttgtatattt tttcacgtaa gcgctttcta
     7441 tctaaattaa ataaaaacta gctgcttagc tagtttttat taattcacca tggaatatct
     7501 gttgataatg attccgctaa tgattggttt tcttttaaac gaattttacg agcaatgctt
     7561 cttgcctcag cacccgcgtg gattcttttt tgttcttctg tttctggttt aacgagtggc
     7621 acttctacag ttttaccatc tgcatccaac gctacaaatg ttaaaaagga tgtcgccgct
     7681 aagtaacgtt ctcctgtttt caaattctcc gcaataattt taacgaagat ttccattgaa
     7741 cttctgcccg ttgaagctac ataagactct aagcaaacag agtgatcatt tttaatcggt
     7801 tttaagaaat ccactgagtc tgtcgatgca gtgacaattt ccgtacgaca atgacgagag
     7861 gcgctgatag aagccgtatc atcaatataa gtcatcaatc taccgccaaa aagggtatta
     7921 tgattattcg tgtccgacgg gaaaacccgg cttgttttaa ttactagtga ttctttgcaa
     7981 aattttgttt gtcttttttc catgtttttc gctccaatct atttatagag aggcaaagtg
     8041 ataataaaat cagatccttt acctaattcg ctttcaaccg aaattttccc attatgtgct
     8101 tctacaatat tcttaacgat tgcaagacca atacctgttc caactgcttt tccgcgtttc
     8161 cttgctttat ccactttata aaaacgctca aacagatatg ggatgtcttc ttccgcaatc
     8221 ccactaccgt tgtcagatac tgtgattaca agattgcttc tagcttcatc aatggtttgt
     8281 tttaaaatta cttttccatc atagccttct tttccagtat gacgaatagc gttcataatt
     8341 aaattaatta atacttgctc catccggtcg gggtcatagg aatactctaa atcgggagtt
     8401 tcaagctcta agccgagttc cacataattc tctttcgcaa gaacgtcaaa attagaaata
     8461 acttttcgca gcaatggagc gagcggtaat ttttgattat ccatttgatt aaaaccagct
     8521 tccattctag caaggtctag catatcatta accaaacgcc caatacgaag ggattcatcg
     8581 taaataattt gtgcaaactc ccgcacttct tcatccgact gagcaacccc gtcaataatc
     8641 gcttcactat aaccttgtaa catcgaaatc ggcgttctaa gttcatgcga aacattatta
     8701 acaaaatcgc ttttcatttt ttcaagttgt ttctcttcgg tcatatcgcg aataaccgca
     8761 acgacactac gcacatgttc ccctgtatac aaaagtgtta aaatggcaac atacgtatgg
     8821 tcagcaaacg taatttctcc gacttgagat tctttctttt ctaacgtatc attcaataat
     8881 tcatttaaag ccactggaat gagcactttt tcggtatttt caggtgagaa gaaccaatta
     8941 tgtaaaaatt cttctgccgg cggattacta agaatgatcg ttttatccac actaaattta
     9001 ataacaccat cagccatccc aactaaaata ttggatagct gttccttttc ttgcctaagg
     9061 gcgctaacat tatacttcaa ttgctttgcc atatcgttaa aagctactcc gagttcacca
     9121 atttcatcat gcgtataagt tggtacgcga ttatcaaagt tcccttttga aacagcaatc
     9181 gcaatttttt tcatttcacg aagcggaaaa gccatgcgag aagaaaagac gaaagacaag
     9241 atagacgtaa taactatcgc aataataccc gaaataatca aagtactcat cgttttttcg
     9301 ttcactttta gaatatcatg gtaagactga taaacgtaaa caacaccagt ttcaccgttc
     9361 gctagtttga atttctgtgc agaaatttca accggtaagg agcttttttc tgttttaaaa
     9421 ttatatttca tcgttacact attatctttt tctaaagctt tatctaatgt cttatcttga
     9481 attaatttat tagcagatgc actagaaatg gtatctggtg actgtgattg atagacgctt
     9541 tttccatttt gttcgataat gacgcccatc gtatcatcaa gtagtatcag tgcagaatca
     9601 ttattatttt cagcagagat tacttcatta ttttcttgca ttacagtgat gatactagct
     9661 gttttgtctt ctaattcatt tgttatttga gtaatgttat ttttttcata aatcattgca
     9721 actaaaaatc cagaaataac taaaatccct atcagtaaga gaataatggt actccaaatt
     9781 ttcccaacaa tactattcca aatcttcatc tattctcacc tcggtcctcg caaaaaaata
     9841 acgaacaaag cacgtgcggc ataacacttg ccgattaaac gtctttgccc gttatcttag
     9901 tctggtttat taatcttctg gaacttcaaa tttatatcca agaccccaaa ctgttacaat
     9961 cattctagca gcgtcttctg atacatcatg caatttttcg cgaagtcttt taacgtgtgt
    10021 atcaattgtt cgcaaatcgc caaagaattc ataacgccat acttctttta aaagagactc
    10081 gcggtcgaat actttatccg gagatctcgc taaataataa agcaagtcat attctttcgg
    10141 tgtcaaaccg atttcttttc cgtcgacaat aacacggtga gcttcgttat caattttcaa
    10201 atgtgggaag gtaataatgt ctcccggtgt tcctcctgct gattcttctg aggattgttt
    10261 ggcgcgacga agaacagctt tcacgcgaag cacaacttct cttgggctaa atggttttac
    10321 gatgtaatca tctgcaccaa cttcaaagcc ttgtactcgg ttagcttcct ctccttttgc
    10381 agtcaacatg acaacaggtg tggatttaaa ctctctcagt tcacgacaaa cttcgatgcc
    10441 atctttacca ggcatcatta aatcaagtag gattacttca taattattgt tcagcgccat
    10501 gcttaatgct tgatcaccat cactagcttc ttcaatacga tagttttctc tttcaagata
    10561 catcttaaga aggcgtcgta tccggtcctc atcatccaca acaagcactc taacttgttc
    10621 actcataagt actcatcccc taactctcat ttacataaaa cgatcattta cattcaatca
    10681 gataaatgga atcttccgta cccacatacg aaaaaaccat acaattgcct ataccaaatt
//
LOCUS       DASDYO010000109        10731 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.109, whole genome shotgun sequence.
ACCESSION   DASDYO010000109 DASDYO010000000
VERSION     DASDYO010000109.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10731)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10731)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10731
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.109"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..663)
                     /locus_tag="U0290_002318"
     CDS             complement(<1..663)
                     /locus_tag="U0290_002318"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatase PAP2 family protein"
                     /protein_id="HEM2302354.1"
                     /translation="MNTNRKKATPLFVIGGFCLILFITIASAIATESNWVARFDLSWI
                     EKIRGGIQPDKTAIVKFLTTLGSAETTIILTIVVVLILFFLRKFVVGLWFGGTMLVCG
                     VVLNLVLKSLVGRTRPASVNWLVSESGFSFPSGHATATAVFYGLAAMFLIFIVPKMWQ
                     KIVIGIIGYGFILFVMYTRVYLGVHFPTDVLGGFFLGTASVFISLGVYFLVRKPLHNL
                     LVK"
     gene            complement(677..1666)
                     /locus_tag="U0290_002319"
     CDS             complement(677..1666)
                     /locus_tag="U0290_002319"
                     /EC_number="5.1.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diaminopimelate epimerase"
                     /protein_id="HEM2302355.1"
                     /translation="METIHFTKVHGSQNDFFLVDEEENHITEWSDEKRANFAIKLCDR
                     KHSLGGADGILYVTKSSEVGPIGQMRVVNSDGSIASMCGNGLRTVARYLLEKHALTDA
                     KVETMKAILDVKKATSLGFDIPTYQVEISPVKFAAETLPMHVGVEKLFNQVIPELDAE
                     LAFSAVSVPNPHLITFVDQAVLDSDKQEKLASYLNSENPYFPDGVNVSFVKRLSDDAI
                     YVRTFERGVGFTNACGTAMSACSLIKKMLDNDILETPLNVYNDGGRVQVTAKKDAAGE
                     ISLQLIGNATFVSKGSVRYENDVVTELTNEATAEQAQYQALVKEVKEFLKTTE"
     gene            complement(1778..4543)
                     /gene="ileS"
                     /locus_tag="U0290_002320"
     CDS             complement(1778..4543)
                     /gene="ileS"
                     /locus_tag="U0290_002320"
                     /EC_number="6.1.1.5"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="isoleucine--tRNA ligase"
                     /protein_id="HEM2302356.1"
                     /translation="MEYKDTLLMPKTDFPMRGNLPNKEPEWQAKWEEEKLYEKIQEKN
                     AGRKAYILHDGPPYANGELHMGHALNKTIKDIIVRYKSMAGFSSPYVPGWDTHGLPIE
                     TAIAKKGVKRKEMSIAEFRKLCAEYAMTQVDGQRTGFKRLGINGDWENPYITLLPEYE
                     AEQIKVFGEMAKKGYIYKGKKPVYWSPSSESALAEAEIEYQDKKSASIFVAFKVTDGK
                     GVLDEGTNIVIWTTTPWTIPANMGITVNPDLDYVVIESAGEKYVVAEALLPSLREKLG
                     FEDATVVKTVRGSELDRVVTKHPFYDRDSLVMNGEHATAEAGTGAVHTAPGHGEDDFL
                     IGKKYDLEVLAPLDDHGVFTEEAPGFEGVFYDTANKMVTEKLEEVGALLKMEFITHSY
                     PHDWRTKKPVIFRATAQWFASIDAFRDDLLAAVKGVNWTPAWGETRLFNMVRDRGDWV
                     ISRQRAWGVPLPIFYAENGEAIITDETINHISELFREHGSNVWFERDVKDLLPAGFTH
                     PGSPNGEFTKETDIMDVWFDSGSSHQAVLNARPELSRPADLYMEGSDQYRGWFNSSLT
                     TAVAITGEAPYRNVLSHGFALDGEGRKMSKSLGNTLLPGKVIKQLGADIVRLWVASVD
                     YQADVRVSDEILKQVSEVYRKIRNTMRFLLGNINDFNPTTNAVSYENLREVDKYMLIK
                     LNDLVKNVKDNYEAFEFSTIYHQINNFCTVELSQFYMDFAKDVVYIEAADSHDRRAMQ
                     TVFYEAVVTLTKLLAPILPHTTEEVWNSLIGEGVESIHLQDLPEVKVLADSEEITAKW
                     DAFMQIRDNVQKALEFARNEKLIGKSMLAKVTLYVDGEAKTLFDSLEGDFAQLFIVSD
                     FELVEGLENAPESAFKSNQVAVQITVAEGETCERCRVVKKDVGVNPKHPTLCGRCADI
                     VVKHYEA"
     misc_binding    complement(4596..4829)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(4826..5353)
                     /gene="divIVA"
                     /locus_tag="U0290_002321"
     CDS             complement(4826..5353)
                     /gene="divIVA"
                     /locus_tag="U0290_002321"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septum site-determining protein DivIVA"
                     /protein_id="HEM2302357.1"
                     /translation="MPLSPLDIHNKEFTRGFRGYDEDEVNDFLDQIIKDYEQVIKEKK
                     RIEDTLNNSEERLGHFTNIEETLNKSLIVAQTAAEEVKASAEKEAKLIIREAEKNADR
                     ILSDSLSKARKIAIEIEDLKRQSKVFRERLRMLVEAQMDLIKSEDWQQMMAYDVDATE
                     LASIKEVEAAESEER"
     gene            complement(5449..5970)
                     /locus_tag="U0290_002322"
     CDS             complement(5449..5970)
                     /locus_tag="U0290_002322"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription repressor NadR"
                     /protein_id="HEM2302358.1"
                     /translation="MKKILGDTRRQMILKWLKEAEAPISGNQLAQKTNVSRQVIVQDI
                     SLLKAGNEPIMATPQGYIYAKETSYTGERRVIAVKHTKEQAAEELNILVDHGVSIIDV
                     IVDHPIYGEITASLHLKSRFDVEKFVRKLQTTGATMLSGLTDGTHLHTIEADTKEQLE
                     QAIKALDKAGFLI"
     gene            complement(5975..7081)
                     /locus_tag="U0290_002323"
     CDS             complement(5975..7081)
                     /locus_tag="U0290_002323"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine desulfurase"
                     /protein_id="HEM2302359.1"
                     /translation="MIYFDHAATTKMSEASLQVFMDASREFFANSESLHDAGTKSAAL
                     LEKCRESFSELLQVPNRGILFTSGGTESNQIAIQTLIHTTDKKEVLVSPLEHASVWQQ
                     LMALEQAGKCRIKVLPVDSFGQVNPATLEKMISAETGLIIIQHVNSEIGTIQPIAELA
                     HIAKKAGVFFHTDIVQSFGKIDLDLSDATSFSISSHKIYGPKGAGILFMKPDSPLQAV
                     LPDVHHEFGFRPGTVNVPAIAAFTTAAYDIIENREQEAIRAMKLKAAICDTLEARVEV
                     EGGPNTSPYILGLTLPNMQGQEALLALNEADIQISTTSACSLRDLAPSRTLIATGKTT
                     EEANRFIRLSFGRENELNDSIIFKEEIDKLLRKR"
     gene            7213..8667
                     /gene="nadB"
                     /locus_tag="U0290_002324"
     CDS             7213..8667
                     /gene="nadB"
                     /locus_tag="U0290_002324"
                     /EC_number="1.4.3.16"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="L-aspartate oxidase"
                     /protein_id="HEM2302360.1"
                     /translation="MTKERVIIIGSGIAGCTAAFRLMHDYDVTIITKGLKEESNSMLA
                     QGGVAAAVSKNDTPKKHFSDTFQAGCFHNKVLAVNQLVTNGPIVIQKLIAEGMTFDEQ
                     NGELSLGLEGAHQLPRILHTGGDQTGKFLTTFLQEKLTNIHWQEQKMAIEIIKQNDSA
                     IGVHCLDKENRLHTYYGEHIILASGGLGQLFPVTTNAATISGDGLALAYRAGAKLTDM
                     EFIQFHPTLLFLNGRCHGLISEAVRGEGAKLIRADGSAVMTDVHPRADLAPRDIVAAT
                     LFAEIQDGNEVFLDITPIPNFEERFPGITANLDAYHVPFRETKRIPVHPGAHFLMGGI
                     RTDLSGKTNIPGLYAIGEVANAGVHGANRLASNSLLETLVFGEKVAEYILTQKTNLID
                     HPEIPLSNQTRTPHLPDKQLLQEKIWETLGITRKPEKITEFLHWLTDFDYANHTRETA
                     EISHMLITAKIIAESALKRTESLGAHRILKGVIK"
     gene            8664..9509
                     /gene="nadC"
                     /locus_tag="U0290_002325"
     CDS             8664..9509
                     /gene="nadC"
                     /locus_tag="U0290_002325"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carboxylating nicotinate-nucleotide
                     diphosphorylase"
                     /protein_id="HEM2302361.1"
                     /translation="MNSILMNQAIQAFLLEDIGQHDLSAETVFPRDTMGEGVFLAKET
                     GILCGISIPPKVYELLGGNIQFEAYKKDGDWIQKGDIIAAVTAPVRTLLSGERVILNL
                     MQRMSGIASQTNFAVKQLDDSAIRICDTRKTAPGLRAFDKYAVQTGGGFNHRNGLYDG
                     VMLKDNHIAFSGGITSAVSTVREKLGHMVKIEVETETAEQVKEAVQAGADIIMFDNRT
                     PEEIKQLVKLVPPHITTEISGNVTLENIHRYKGSGANYLSLGSLTHSVRAFDISFNSK
                     GGIKA"
     gene            9506..10606
                     /gene="nadA"
                     /locus_tag="U0290_002326"
     CDS             9506..10606
                     /gene="nadA"
                     /locus_tag="U0290_002326"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="quinolinate synthase NadA"
                     /protein_id="HEM2302362.1"
                     /translation="MNLLETVEQDTMPTHYKQMTQAEMIARVTEIKAQLGENLFIPCH
                     HYQKDEVVPFADAIGDSLQLAQIAAQNKKAKHIVFCGVHFMAETADMLTTSEQIVTLP
                     DMRAGCSMADMADIHQLTNAWPKLQTLFGDTILPVTYINSTAAIKSFVGEHGGTTVTS
                     SNATKIVSWALEQKERIFFLPDQHLGRNTAFELGIPLEHMAIWNPIKNELEYEGNLDD
                     CKVILWKGYCSVHQHFTVKNIENIRKNNPKMRIIVHPECTHEVVSLADDSGSTKKIVT
                     EINNAAPGTEWAVGTEANLVGRIIQENPDKKIVSLNPFMCPCMTMNRIDLPHLLWTLE
                     AIQNGEQRNQIKVDKQTTKFALKALERMLQLS"
BASE COUNT         3172 a         2329 c         1955 g         3275 t
ORIGIN      
        1 tttcacaagt aaattatgta atggttttcg tactaagaaa taaacgccta gtgagataaa
       61 taccgatgct gtaccaagga aaaatccacc aagtacatcc gtcgggaaat gcacaccaag
      121 ataaacgcgt gtatacatga caaacaggat aaaaccataa ccgataatac cgataacgat
      181 tttttgccac atttttggca ctatgaaaat caagaacatc gctgcaagac cataaaaaac
      241 agccgttgcc gtcgcatgtc cacttgggaa actaaagcct gactcgctta ctaaccagtt
      301 cacgctagct ggacgcgtac gaccaaccaa acttttcaag acaagattta agactactcc
      361 acaaacaagc atcgttccac caaaccaaag tccgacaaca aattttcgta aaaagaataa
      421 aataagaacg actacgatag tcaaaataat tgtcgtttct gcgcttccta aagtagttag
      481 aaatttaaca atggctgttt tatccggttg aatgccgccg cggatttttt caatccagct
      541 taagtcaaaa cgtgctaccc agttactttc tgttgcgata gcggaagcga tagtaataaa
      601 taaaataagg caaaatccgc caataacgaa taacggtgtt gcttttttac gatttgtatt
      661 catggttaac tccttttcat tcggttgttt ttagaaattc ttttacttct tttacaagcg
      721 cctgatactg agcttgttca gctgtcgctt catttgtaag ctctgtaacg acatcatttt
      781 cataacgaac ggaacctttg ctaacaaaag tggcattgcc aatcagttgt agcgaaattt
      841 caccagcagc atcttttttc gcagttactt gcactcttcc gccatcatta taaacattta
      901 gcggcgtttc caatatatca ttatctaaca tttttttaat caaactacaa gccgacatcg
      961 ctgttccaca tgcattcgta aaaccgacgc cgcgttcaaa agtacgcaca taaatagcat
     1021 catcgcttaa acgtttcaca aagcttacat tcacgccatc tgggaaatac ggattttcgc
     1081 tatttaaata acttgctaat ttttcttgtt tatcggaatc tagcacagct tggtccacaa
     1141 atgtaatcaa atgcggatta ggaacagaaa cagcagaaaa agcgagttct gcatcaagtt
     1201 ctgggataac ttgattaaat aatttttcca cgcctacatg catcggtaat gtttctgctg
     1261 caaatttaac aggagaaatt tccacttgat aggttggaat atcaaaacca agcgaagttg
     1321 cttttttgac atcaagtatc gctttcatag tttctacttt tgcatctgtc aaagcatgtt
     1381 tctcaagtaa atagcgagct accgttctta agccattccc gcacatcgaa gcaattgagc
     1441 catctgaatt aacgacacgc atttggccaa ttggtccaac ttcactgctt tttgtgacat
     1501 ataaaattcc gtctgccccg ccaagcgagt gctttctatc gcaaagcttt atcgcaaaat
     1561 tagcacgttt ttcatccgac cattctgtga tgtgattttc ctcttcatca actaagaaaa
     1621 aatcgttttg cgaaccatgt acttttgtaa agtgaattgt ttccattacg tcaagcaacc
     1681 tcctctattt ggaattacgt ctataatacc acatcttaaa ttaaaaaagc ttggggaacc
     1741 tccttttgaa atgagtagga ttttccccaa gcgagcatta agcttcgtag tgttttacaa
     1801 caatatccgc acagcggcca cacagtgttg gatgttttgg atttacgcct acatcttttt
     1861 tcactacacg gcaacgttca caagtttcgc cttctgctac ggtaatttga acagctactt
     1921 gatttgattt gaatgcagat tctggtgcat tttctaaacc ttccacaagt tcaaagtcag
     1981 aaacgataaa cagttgtgca aaatcgcctt ctaaagaatc aaatagtgtt ttcgcttcgc
     2041 cgtctacata taaagttact ttagcaagca ttgatttacc gattaatttt tcgttacgag
     2101 cgaattctaa cgctttttgg acgttatcac ggatttgcat gaatgcgtcc catttcgctg
     2161 taatttcttc gctatccgct aatactttaa cctctggcaa gtcttgcaag tgaatacttt
     2221 ccacgccttc accaatcaag ctattccaaa cttcttctgt tgtatgcggt aaaattggag
     2281 caagtaattt ggttaacgta acaaccgctt cataaaagac agtttgcata gcacgacgat
     2341 catgactatc agccgcttcg atgtaaacaa catctttggc aaagtccata taaaattggc
     2401 ttaattctac tgtacagaaa ttattgattt ggtggtaaat agtagagaat tcgaaagctt
     2461 catagttatc cttcacattt ttcactaaat catttaattt aattagcata tatttgtcaa
     2521 cttcacgtaa gttttcataa gaaacggcgt tagtagttgg attaaagtca ttaatatttc
     2581 ctagtaagaa acgcattgtg ttacggattt tacggtatac ttcggatact tgttttaaga
     2641 tttcatcact aacacgaaca tcagcttgat aatctacaga agcaacccaa aggcgaacaa
     2701 tatccgcacc aagttgttta attactttgc ctggaagtaa agtatttcca agtgatttac
     2761 tcattttgcg accttcccca tccagtgcga aaccatggct tagcacgtta cgataaggcg
     2821 cttcaccagt gattgctaca gcagttgtta aggatgagtt gaaccagcca cgatattggt
     2881 cagagccttc catatataaa tcagccggac gacttaattc tgggcgagca ttcagcacag
     2941 cttgatgact agaacctgaa tcaaaccaaa cgtccataat atcggtttct tttgtaaatt
     3001 ctccatttgg actacctgga tgcgtaaagc cagcaggtaa taaatctttc acatcgcgtt
     3061 caaaccaaac attcgaacca tgctcacgga aaagttcaga aatgtgatta attgtttcgt
     3121 ctgtgataat cgcttcccca ttttccgcat agaaaatcgg tagtggaacg ccccatgcac
     3181 gttgacgaga aataacccag tcgccgcggt cgcgaaccat attgaataaa cgtgtttcac
     3241 cccatgctgg agtccaatta acacctttaa cagcagcgag taaatcatca cggaatgcgt
     3301 caatcgaagc aaaccactgc gctgttgcac ggaaaataac tggttttttc gtacgccaat
     3361 catgtggata agagtgagtg atgaattcca tttttagtaa tgcgcccact tcttctagtt
     3421 tttctgtgac cattttgttc gctgtatcgt aaaatacgcc ttcaaatccc ggtgcttcct
     3481 ctgtgaatac accatgatca tctagtggag caagtacttc taaatcgtat tttttcccga
     3541 ttaaaaagtc atcttccccg tgtccaggag ccgtatgaac cgcaccagta ccggcttcag
     3601 cagtagcatg ttccccgttc attactaagg aatcacggtc atagaatggg tgtttagtta
     3661 caacgcggtc aagttcagaa ccacgaactg ttttcactac tgtcgcatct tcaaagccta
     3721 gtttttcgcg taagcttggt aaaagtgctt ctgctacaac atatttttcc ccagcggatt
     3781 caattactac atagtccaaa tcagggttaa cagtaatacc catgtttgca ggaattgtcc
     3841 aaggagttgt tgtccagata acgatattcg ttccttcatc tagtacacct tttccgtcag
     3901 taactttaaa ggcaacaaaa atcgaagcag attttttatc ctgatattcg atttctgctt
     3961 ctgccagcgc agattcacta gaaggagacc aataaaccgg ttttttacct ttgtaaatgt
     4021 aacctttttt cgccatttca ccgaagactt tgatttgctc tgcttcgtat tctggtaaaa
     4081 gtgtaatgta aggattttcc cagtcaccgt taattccaag tcgtttgaat cctgtacgtt
     4141 gaccgtctac ttgcgtcatt gcatattcgg cacatagttt gcggaattca gcaatagaca
     4201 tttctttccg tttaacgcct tttttggcga tagctgtctc aattggtagt ccgtgtgtgt
     4261 cccaaccagg aacatacggg gagctgaagc cagccattga tttataacgg acgataatat
     4321 ctttgattgt tttgtttaga gcgtgaccca tgtgaagctc accgttagca taaggaggcc
     4381 catcatgcaa aatgtacgcc ttgcgtccag catttttttc ttgaatcttc tcatatagtt
     4441 tttcttcttc ccattttgct tgccattcag gttctttgtt tggcaggttt ccacgcatcg
     4501 gaaaatctgt ttttggcatt aataacgtat ctttatattc catactctat tctcctttaa
     4561 atctttattt ttaaacacaa aaaaatctct cccaaaaaag ggacgagatt cgcggtacca
     4621 cccttgttga catgcaattt tgttgcttgc ccacttcatt aatgccataa cgctggctcg
     4681 cgctaacact tactcaagcg attgcttttt cgggttagaa ctaaagagtg atttctattt
     4741 tttagaggat agttggtctc gcaccattta ccaactcgct tcatatcctt tgtctaaaaa
     4801 atttacttgt ctcttataat cgtttttaac gttcttctga ttcagcagct tcgacttctt
     4861 taatagacgc taattctgtt gcatctacat cgtaagccat catttgctgc caatcttcac
     4921 ttttaattaa atccatttgc gcttctacta acatacgcag acgctcgcgg aatactttag
     4981 attgacgttt taagtcttca atttcaatcg cgattttacg agctttagaa agtgagtcgc
     5041 ttaaaattcg gtctgcattt ttttcagctt cacggataat aagttttgct tctttttcag
     5101 cggaagcttt cacttcttcg gcagctgttt gtgccacgat taatgatttg tttaatgttt
     5161 cttcaatgtt tgtaaaatga cctaaacgtt cttcactatt atttaaagtg tcctcaatac
     5221 gctttttctc tttaataact tgttcataat ctttaatgat ttgatcgagg aagtcattta
     5281 cttcgtcttc gtcataacct ctaaaaccac gggtaaactc tttgttatgt atatccagcg
     5341 gcgataatgg catatctagc acctccatac gactatttgt ttataaatac ctaacataca
     5401 ttctaccata gttactagct ttttcctaga atttatattg aaaaatggtt agattaaaaa
     5461 tccagcttta tctagcgcct taatcgcttg ttctaattgt tctttcgtat ctgcttcaat
     5521 cgtatgtaaa tgtgttccat ccgttaaacc agacagcatt gttgctcctg ttgtttgcaa
     5581 tttccgcaca aatttctcta catcaaaacg gctttttaaa tgtagtgaag cggtgatttc
     5641 gccgtatatt ggatgatcca caatcacatc aataatggaa acaccgtgat ctaccaaaat
     5701 atttagttcc tcggcagctt gttctttcgt atgtttcacg gcaataacgc gcctttcccc
     5761 tgtataactt gtttctttcg cataaatata gccttgtggg gtagccataa ttggttcatt
     5821 gccagctttt aacaaagaaa tatcttgaac aatcacttgg cggctaacat ttgttttctg
     5881 tgctaattga tttccagaaa ttggcgcctc ggcttctttt agccatttta aaatcatttg
     5941 cctacgcgta tctcctaata tttttttcat cttatcacct ttttcgtaat aatttatcga
     6001 tttcttcttt aaaaataata ctatcgttta attcattttc tcttccaaaa gataagcgga
     6061 taaaacggtt tgcttcttct gttgtttttc cagtagcgat taatgttctg gacggagcta
     6121 aatcacgtaa actacatgca cttgtcgtcg agatttgaat atctgcttcg tttaaagcaa
     6181 gtaacgcttc ctgaccttgc atatttggca aagtaagtcc taaaatatac ggcgatgtat
     6241 tgggtccacc ttccacttct actcgcgctt ctaatgtgtc gcaaatcgca gcttttagtt
     6301 tcatagctct aatcgcttct tgttctctat tttctattat atcataggcg gcagttgtaa
     6361 aggcagcaat agctggaaca tttactgtcc ccggtctaaa gccaaattca tgatgtacat
     6421 ctggcaaaac tgcctgcaaa ggagaatctg gtttcataaa aagtattccc gccccttttg
     6481 gtccataaat tttatgcgat gaaatactaa aactagtggc atcacttaaa tctaaatcaa
     6541 tttttccaaa ggattgaacg atatcggtat gaaaaaagac acctgctttt ttagcaatat
     6601 gagctagttc cgcaattggt tggatggttc cgatttccga attaacatgt tgaataataa
     6661 taagccccgt ctcagcagaa atcatttttt ctaaagtagc tggatttact tgcccaaacg
     6721 aatcaactgg taatacttta atccgacact tccccgcttg ttcgagtgcc attagttgct
     6781 gccaaactga agcgtgttct agcggactta cgagcacttc tttcttatca gttgtatgga
     6841 ttagcgtttg gatggcaatt tgattactct ctgttccacc actcgtaaat aaaatcccgc
     6901 ggtttggaac ttgtaataac tcagaaaaac tttcccggca tttttctaaa agggccgctg
     6961 atttcgtccc agcatcatgt aaactctccg aattagcaaa gaattctcgc gatgcatcca
     7021 taaaaacttg taaagaagct tcactcattt tcgtagtagc cgcatggtca aagtaaatca
     7081 tctctttatc tctcccttaa aattttatac ttgaatttag tttgatttta tgtgattata
     7141 gatgacaaga catctgtata ttcattaaga agtatacaat taatcgaacc tactatgcaa
     7201 gaggtggaaa caatgacaaa agaacgagtg attatcattg ggagcggtat cgcaggttgc
     7261 actgctgcct tcagattaat gcacgactat gatgtgacaa taatcacaaa aggtctcaaa
     7321 gaagaaagta attcgatgct cgctcaaggc ggtgtcgcag cagctgtgtc caaaaacgat
     7381 accccgaaaa agcattttag cgataccttc caagccggtt gttttcataa taaagttctc
     7441 gcagtaaatc aactcgttac caacggtcca atcgttatcc aaaaattaat cgcagaaggg
     7501 atgacttttg acgaacaaaa tggtgaactt tcgcttggtt tagaaggcgc acaccaattg
     7561 ccacgaattt tacatactgg cggtgatcaa accggcaaat ttcttactac ttttttacaa
     7621 gaaaaattaa caaacattca ctggcaagag caaaaaatgg ctatcgaaat tataaaacag
     7681 aacgattcgg ctatcggcgt gcattgttta gataaagaaa atcgactaca tacttattac
     7741 ggagaacata ttattttagc aagcggcgga cttggacaac tttttccagt tacgacgaat
     7801 gcggcgacaa tttccggtga tggtttagca ctggcttacc gggctggtgc taagctaacc
     7861 gatatggaat ttatccaatt tcatcccact cttctctttc taaacggacg ttgtcatggg
     7921 cttatttcag aagcggtccg cggtgaagga gccaaactta ttcgcgcaga tggttcggcg
     7981 gtaatgactg atgttcaccc gagagctgac cttgcgccgc gcgatattgt tgctgcgacg
     8041 ctatttgcag aaatacaaga tggcaatgag gttttccttg atatcacgcc aattcctaat
     8101 tttgaagaac gttttccagg aattactgct aacttggatg catatcacgt cccgtttcgt
     8161 gaaacaaagc ggattccggt tcatcctggc gcacattttt taatgggtgg tattcgtacc
     8221 gacctatcag gtaaaacgaa cattcccggt ttgtatgcca ttggtgaggt tgcaaatgca
     8281 ggtgtgcacg gcgctaaccg tctcgccagt aactccctcc ttgaaacgct cgtctttggt
     8341 gaaaaagtgg ctgaatacat tctcacgcaa aaaacaaacc taatagacca tccagaaatc
     8401 cctctttcga accaaacccg aacaccccat ttaccagata aacaattact tcaagagaaa
     8461 atctgggaaa cgcttggcat cacaagaaaa ccagaaaaaa tcaccgaatt tcttcattgg
     8521 cttactgatt tcgattacgc aaatcacact cgagaaacag cggaaattag ccacatgctt
     8581 atcaccgcaa aaataatcgc cgaaagcgcg ctcaaacgaa cagaaagtct cggcgcacat
     8641 cgaatattaa aaggagtaat aaaatgaatt ccatacttat gaatcaagca attcaagcat
     8701 ttttactaga agatatcggt caacatgact taagtgcaga aactgttttc ccccgtgaca
     8761 caatggggga aggtgttttc ctagcaaaag aaacaggtat tctttgtggc atttccatcc
     8821 caccgaaagt ttacgaactg ctcggtggaa atatacaatt tgaagcttat aaaaaagatg
     8881 gtgactggat tcaaaaaggc gatattatcg cggctgttac ggctccagtt cgcacgttac
     8941 tttccggtga gcgggtcatt ttaaatttaa tgcaacggat gagtggtatc gctagccaaa
     9001 ctaattttgc tgtcaaacaa ctggatgatt ccgctattcg aatttgcgac acgaggaaaa
     9061 cagcgcccgg tctgcgtgcc ttcgataaat acgcggtaca gactggtggc ggctttaatc
     9121 atcgcaatgg tctatacgat ggtgttatgc taaaagacaa ccacatcgcc ttctctggag
     9181 gtattacaag tgctgtatct actgtacggg aaaaacttgg ccatatggta aaaatcgaag
     9241 tggaaacgga aactgctgaa caagtaaaag aagccgttca agccggcgca gatatcataa
     9301 tgtttgataa tcgcacaccg gaagaaatca agcaactggt taagctagtt cccccgcaca
     9361 ttactacaga aatttccggt aatgtcactt tagaaaatat tcatcgttat aagggttctg
     9421 gggcaaatta cctttcttta ggctccttaa cgcattccgt tcgtgcattt gacatcagtt
     9481 tcaatagcaa aggaggaata aaggcatgaa tttactagaa acggtcgaac aagatacaat
     9541 gccaactcat tataagcaaa tgacgcaggc cgaaatgatt gcccgcgtca cggaaattaa
     9601 agcccagctt ggcgagaatc tctttatccc ctgccaccat tatcaaaaag atgaggtcgt
     9661 tccatttgcc gatgcgattg gcgattcctt acaattagcg caaattgctg cacaaaataa
     9721 aaaagccaaa catatcgttt tttgcggtgt tcattttatg gcagaaacag cggatatgct
     9781 tacgacaagc gagcagattg ttactttgcc ggatatgcgc gctggttgtt cgatggcaga
     9841 tatggcggac attcatcagc taacaaatgc ttggccaaaa ctgcaaaccc ttttcggcga
     9901 tacgatttta cctgtcactt acattaattc cactgccgca attaaatcct tcgtcggtga
     9961 acatggtggg actacggtga catctagtaa cgcaacaaaa attgtctcat gggcgctcga
    10021 acaaaaagag cggattttct ttcttccgga tcaacatcta ggtcggaaca ctgcgttcga
    10081 actaggcatt cccctcgaac atatggcaat ttggaacccg ataaaaaatg aactggaata
    10141 tgagggcaat ttggatgatt gtaaagtcat tctgtggaaa ggctactgct ctgttcacca
    10201 acatttcacc gtcaaaaata tcgaaaacat tcgtaaaaac aatcctaaaa tgcggattat
    10261 tgttcatccc gaatgcaccc atgaagtcgt ttctttagca gatgattccg gttcaacgaa
    10321 aaaaattgta actgaaataa acaatgccgc acctggcaca gaatgggcag tcggtaccga
    10381 agccaattta gttggtcgca ttatccaaga aaacccagat aaaaaaatcg tctcgctaaa
    10441 tccgtttatg tgcccttgta tgaccatgaa tcgaattgat ttaccacatt tactctggac
    10501 actagaagct atccaaaacg gcgaacaacg aaaccaaatc aaagtcgata aacagacaac
    10561 caaatttgcc ttaaaagcct tagaaagaat gcttcaatta agctaataaa aaaacgaaag
    10621 cagcaactgc tttcgtttca gctcctttat aaaagcttct atttgtcaat ctaaatttta
    10681 atctgtagaa cttactcgag catatgctac tatcatgact aaaaagcaac t
//
LOCUS       DASDYO010000110        10584 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.110, whole genome shotgun sequence.
ACCESSION   DASDYO010000110 DASDYO010000000
VERSION     DASDYO010000110.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10584)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10584)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10584
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.110"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            122..781
                     /locus_tag="U0290_002327"
     CDS             122..781
                     /locus_tag="U0290_002327"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464776.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2302363.1"
                     /translation="MKQNILNNYVSTNDFPVITRGKRKYLTYEGLEDSYVYILKKGII
                     KTSIISRDGREFNLNYINKMDIISLLKDEYSQFANAPFNIRVESDTAELYQVDRVRFW
                     KDVNRDVDLQIYVKDYYRTRLLQSIKKMQQMLMNGKLGAICTQLYELYTLFGVEIAPD
                     QYLIDFLVSNEEIGHFCGINSASSVNRIFQQLKKEGVITMQNRYIIIKKLDVIQENVI
                     F"
     gene            complement(821..1015)
                     /locus_tag="U0290_002328"
     CDS             complement(821..1015)
                     /locus_tag="U0290_002328"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302364.1"
                     /translation="MKISKPAYLVLLVVGLVFVFLGLSNIGISIFWDFSDLENLMVGS
                     LLIIIGLITLRIRYSFKKRG"
     gene            complement(1082..1930)
                     /locus_tag="U0290_002329"
     CDS             complement(1082..1930)
                     /locus_tag="U0290_002329"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YitT family protein"
                     /protein_id="HEM2302365.1"
                     /translation="MNKNKTGWNIAKIIVGALIFSLAVNVFAIPNNLGEGGVTGLTMM
                     LYYLLGWTPAVTTFIFNGILLIIGYKFLDRMTIVWTIVAISFTSIFLHFSEPLAFVAN
                     QTIVAAIFAGLMMGIGMGLIMNGGGTTAGSAILAKIANKYLGWNTSYALLFFDLLVVI
                     PSVFVIGFENMLFTIVSLYISTKVLDFILEGYNPKKSVTIISDYYEEIATEIDANLER
                     GITLFNGQGFYMRQDKKILYIVISRDQLLPLTKIVNKYDEKAFFIINDVQSVVGEGFT
                     KQITSE"
     gene            complement(2260..2397)
                     /locus_tag="U0290_002330"
     CDS             complement(2260..2397)
                     /locus_tag="U0290_002330"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014092656.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302366.1"
                     /translation="MTKVILTIFAIIVPAFLGFILAYQIYKKKTATYMPLKNEFVHWA
                     K"
     gene            2548..3261
                     /gene="treR"
                     /locus_tag="U0290_002331"
     CDS             2548..3261
                     /gene="treR"
                     /locus_tag="U0290_002331"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464778.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose operon repressor"
                     /protein_id="HEM2302367.1"
                     /translation="MNKKNKFFDIYLELEQDITSGVYPAGTLLPSENVLAKRFSVSRE
                     TIRKALVLLLENGCIQKLQGKGSIVIDRERYSFPVSGLTSFKELQKSEHMNATTEVIR
                     NERTTLPDRIADFAGLPHGSNCLAILRVRYLEGEATILDYDYLLDKTEPIANEILEDS
                     LYQYLENEKGYEISYAQKEITVEPLNAEDKKYLALHGDTHVVVVKSTVFLKDTTLFQY
                     TESRHRLDKFRFIDFARRR"
     gene            complement(3292..4938)
                     /gene="treC"
                     /locus_tag="U0290_002332"
     CDS             complement(3292..4938)
                     /gene="treC"
                     /locus_tag="U0290_002332"
                     /EC_number="3.2.1.93"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha,alpha-phosphotrehalase"
                     /protein_id="HEM2302368.1"
                     /translation="MTKFAQKTIYQVYPKSFYDTTGDGTGDIPGITAKLDYLQKLGIE
                     MIWLNPFYPSPQNDNGYDIADYTAVDPLFGTMDDVTTLIKEAKKRNIGIMIDLVLNHT
                     STEHPWFKKALAGDPFYRDFYYFRPAKADGSPPTNWVSKFGGNAWEKLPDSSEYYLHL
                     YDVTQADLDWANPNVREALFDVVNFWIDKGVEGFRLDVLNVIAKPKFLEDDFEGDGRR
                     FYTDGPGIHAYLKELHERTFGDKPIITVGEMSSTDIDNCIRYSNPDEKELSMVFHFHH
                     LKVDYPDGEKWRLADVNFENLKSIFHTWQVAMSEENGWDALFWNNHDQPRALGRFASD
                     KPEHYYHSATLLGATIHFMRGTPFVYMGEEIGMMNPKFPTIDDYVDVETLNHFDILQK
                     NGLSEQEVMAIIKERSRDNSRTPMQWDDSQNAGFTTGTPWLKVADNASEINVQAALSN
                     KTSIFYFYQKLIALRKEYPVIQTGDYTPYWTDEDLIIAYKRSNEITSLLSIHHFGSTT
                     KKIQLPNEFLNAKVLLSNYERQTISSELELAPYETLTLIR"
     gene            complement(4957..6441)
                     /gene="treP"
                     /locus_tag="U0290_002333"
     CDS             complement(4957..6441)
                     /gene="treP"
                     /locus_tag="U0290_002333"
                     /EC_number="2.7.1.201"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464780.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS system trehalose-specific EIIBC component"
                     /protein_id="HEM2302369.1"
                     /translation="MVDYTKDASALLELIGGKENISSVTHCATRMRFVLQNPDNADVE
                     AIEDIPAVKGTFTQAGQFQVIIGNDVAIFYNEFSKISGVEGVNKEDAKVDAKKNMSIL
                     QRLLAGLAEIFTPLIPAIVVGGLILGFRNVIGDIKFLEDGTKTIVDVYPFWAGVYSFL
                     WLIGEAVFHFLPVGITWSIAKKMGTTQILGIVLGLTLVSPQLLNAYSVVETKAGDIPV
                     WDFGFAQVQMIGYQAQVIPAIMAGFLLAYLEIWLRKFIPNAISMIFVPFFALVPTVLA
                     AHVILGPIGWKIGDAISNVVYAGLTGGLSWLFAALFGFLYAPLVVTGLHHMTNAIDLQ
                     LMSQFGGTNLWPMIALSNIAQGSAVLAIIFLHRGNEKEEQVSIPATISCYLGVTEPAM
                     FGINLKYLYPFVAAMIGSAIAAVVSVSSGVMANSIGVGGLPGILSINPKYYAVFAVCM
                     LITIVVPFILTVLFRKYNILNKVDTAPIRTFGKKEYRESAKTTN"
     gene            6559..7020
                     /locus_tag="U0290_002334"
     CDS             6559..7020
                     /locus_tag="U0290_002334"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM2302370.1"
                     /translation="MKHVRTAAIITHQNKILLHSNQEEDYWTLPGGAVENESTKEGLK
                     REMKEELGEDVAILELSIIAENRFLYRGEEIDSIEFYYAVKLLPESSLLNQPTFTKIE
                     EFGQYGEEAYKLHFKWFDIDKLKNITILPTFLETELANLSSKNIIHLEQTT"
     gene            complement(7059..7523)
                     /locus_tag="U0290_002335"
     CDS             complement(7059..7523)
                     /locus_tag="U0290_002335"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464782.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302371.1"
                     /translation="MDNCLAQLQMYDYLLKKYRNKEVFPDTRMIVEIDGKLWTGDFLQ
                     LDDCHIIEIDWEDTRFTRIERTKDAINDEFNEKVTNSNVNVSENRIDSKIGSLKNIEI
                     LYQEIGNFVRQVESSTTTLKPLLYNAYCLDTRVKLPFLDISKKEITLVSLTN"
     gene            7712..8626
                     /locus_tag="U0290_002336"
     CDS             7712..8626
                     /locus_tag="U0290_002336"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2302372.1"
                     /translation="MYKQMKLKATDGLDLHLHIWDEVKNPVGVVQIVHGMAEHGARYG
                     LFAERLNQAGYIVVADDHRGFGKSAIDEASLGHLDGETGFQNMVEDEAVVRTYLKESY
                     PELPYFIFAHSMGSFIIRTFMAKHQVDGVILSGSGLQPIALLKMGQMITKQRVKKDDR
                     KRSGFLNKLAFWGYNKPFNENHRFSWLSRDVAIYEAYEQDPFCGPVVGTSGFFHNLFE
                     AVKVSQQKETLESVPKDLPVLLLSGSDDPVGHFGKDTPKIALSLEKAGVEDVTYKIYE
                     DARHELVNEICKETVFQDVIDWLNEKRR"
     gene            complement(8652..9899)
                     /locus_tag="U0290_002337"
     CDS             complement(8652..9899)
                     /locus_tag="U0290_002337"
                     /EC_number="1.2.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464784.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-5-semialdehyde dehydrogenase"
                     /protein_id="HEM2302373.1"
                     /translation="MTELIKKGSGAKEAAQFLAQATTKHKNAALLNLSNDLLIHTATL
                     LQENEKDILRAKQKGTPETMIDRLRLTEERIKEISEAVKQVVALKDPIGEVTNMWKNE
                     AELTIGKTRVPLGVIGIIYESRPNVTVDASVLCFKTGNAVILRGGSDAIDSNKALMSV
                     IQDSLEASGFPRSSVQLIEDTSRETARDMMRLNRFLDVLIPRGGARLIQTVLENATVP
                     VIETGTGNCHIYVDKAAEKQMAIDILVNAKCSRPSVCNAAETLLIHRDVAEDYLPAME
                     TALKEYDVELRADERAKEILQEAKAATESDWEDEFLDFILAIKVVDSAEEAIDHINKY
                     GTKHSEAIISNDYATGQAFHQKVDAAAVYINASTRFTDGFAMGFGAEIGISTQKLHAR
                     GPMGLTELTSTKYIIFGDGQIRN"
     gene            complement(9883..>10584)
                     /gene="proB"
                     /locus_tag="U0290_002338"
     CDS             complement(9883..>10584)
                     /gene="proB"
                     /locus_tag="U0290_002338"
                     /EC_number="2.7.2.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEM2302374.1"
                     /translation="NEGKEVILVSSGAIGVGCHKLQLSVRPTSIPDLQAVASVGQSEL
                     MHIYSKFFGEYGQVVGQVLLTRDVTDFPISRENVMNTLDSLLSRGIIPIVNENDTVAV
                     EELEHVTKYGDNDLLSAIVAKLVQADLLIMLSDIDGFYGSNPATDPEAVMFSEINQIT
                     PEIEALAGGRGSKFGTGGMLTKLSAASYCMDSNQKMILTNGKNPTVIFNIMQGEQIGT
                     LFASKKEELSHDRTH"
BASE COUNT         3516 a         1961 c         1920 g         3187 t
ORIGIN      
        1 tttaatttgg taattattta tgatatatac aaatttgtat aacatatgtt gaaaaaatag
       61 ggaatagtat tttgtatgat taatatgctt taactggaat gacaaaaagg aggttaagaa
      121 catgaagcaa aatattctta ataattatgt gagcacaaat gattttccag ttattacaag
      181 gggaaaacgt aaatatttaa cttacgaagg acttgaagat tcatatgtgt acatacttaa
      241 aaaagggatt attaaaacga gtattatttc aagggatggc agggaattta atttaaacta
      301 cattaataaa atggacatta tctcactttt aaaagatgag tattcgcagt ttgccaatgc
      361 gccgtttaac attcgtgtgg agtcagacac agcagaacta tatcaagttg accgggtaag
      421 gttttggaaa gacgtgaatc gtgatgtgga tttgcaaatt tatgtgaaag attattaccg
      481 tacgaggctg ctacaatcca taaaaaaaat gcagcaaatg ctaatgaatg ggaaacttgg
      541 agcaatttgt acgcaactct atgaacttta tacgcttttt ggagtggaaa ttgcgcctga
      601 tcagtatttg attgattttc tagtaagtaa tgaagaaatt ggtcattttt gcgggattaa
      661 ctccgcaagc agtgtgaacc ggattttcca acaactcaaa aaagaaggcg tcattacgat
      721 gcaaaaccgc tatattatta ttaaaaaatt agatgttatt caagaaaacg ttatttttta
      781 acagtagaaa agcactgcaa tcaatatttg cagtgctttt ctatcctctt tttttaaatg
      841 aatatcgaat cctaagtgtg atgagcccga tgatgattaa taaactacca accatcaaat
      901 tctctaagtc gctaaaatcc caaaaaatag agattccgat attagatagt cctagaaaaa
      961 caaaaaccaa gccaacaaca agtaaaacca aataagccgg tttagaaatt ttcataagga
     1021 cgcctcattt acattaaaaa taatttccac attattgtaa cataagttga gagaaacgac
     1081 atcactcact tgttatttgt tttgtaaagc cttcccccac aacactttgt acatcattaa
     1141 taataaagaa tgctttctca tcatatttgt tgacgatttt ggtgagcggc agtaattgat
     1201 cacgacttat tacgatataa agaatttttt tatcttgacg catatagaaa ccttgaccgt
     1261 tgaaaagggt aataccacgc tctaaattcg catcaatttc agttgcaatt tcttcataat
     1321 aatccgatat aatcgtgaca gattttttag gattgtaacc ttcaagaatg aaatcaagta
     1381 ctttggttga aatataaagc gaaacgatgg taaatagcat gttttcaaaa ccgattacaa
     1441 aaacagaagg aataacaaca agtaaatcaa agaatagcaa cgcataactc gtattccaac
     1501 caagatattt attagcaatt ttcgctaaaa tagcgctacc agcagtagtt ccgccaccat
     1561 tcataattag tcccatacca attcccatca ttaatccggc aaaaatggct gcgacaatcg
     1621 tttgatttgc cacgaaagca agcggctcag aaaaatgtaa aaagatcgaa gtgaaactaa
     1681 tagcaacaat tgtccagaca atcgtcattc gatcaagaaa cttgtaacca ataataagta
     1741 aaataccatt aaatataaaa gtagtgactg cgggagtcca accaagcaag taataaagca
     1801 tcattgttag cccagtaacg ccgccttctc ctaaattatt cgggatagca aaaacgttga
     1861 cagctagcga gaaaataagc gcccccacga taatttttgc gatgttccaa ccagttttat
     1921 ttttgttcat ctccatttct cctttccatg caaaaaaaga cccaagaata ccactaaaca
     1981 ggcactctgg agtcttttta taaaaaaagc attaactgac atctttgtca ttaattgtct
     2041 caccataaaa aattgctatt catttcaaca caatttacaa tataccataa aaaataagca
     2101 ccttcaagcc tttttaagta taagtaatta gccgaaaatc gctaaaaatg gcattaaatt
     2161 aagtagaaat aaacctacaa gaacactaat aacaattttg atgacaagtg gtttttcact
     2221 ttctgttttt ttcaatttgt tttcctcctt aatgtgcgct tatttagccc aatgtacaaa
     2281 ttcatttttt aatggcatat aagtggctgt ttttttctta tagatttggt aagcaagtat
     2341 aaatccgaga aacgcaggaa cgataattgc aaaaatagtt aaaataactt tagtcataga
     2401 aaatacctcc tcttaaatca aaacacatgt tcagacctta ctactaatag tgtaccaaat
     2461 ttcacgtgat tttggtaata aagcgagcta gcaaatttcg gttacaatta tgggtaaatg
     2521 tgctacaata gccttgggtg agtaaatttg aataaaaaaa ataagttttt tgacatttat
     2581 ttagaattag agcaagacat tacatcaggc gtttatccag caggcacact acttccaagt
     2641 gaaaatgtcc tggcgaagcg tttttcggta tcccgtgaga ccattagaaa agcacttgta
     2701 ttattgcttg aaaacggctg tattcaaaag ctccaaggaa aaggatcgat tgtcattgac
     2761 cgagaacgct attcttttcc agtctctggt ttaactagtt ttaaggaatt acaaaaatcc
     2821 gaacatatga atgcgacaac ggaagtcatc cgaaatgaac gaaccacttt accagatcga
     2881 attgctgatt ttgctggtct tccgcacggc tcaaactgct tagctatcct cagagtgcgc
     2941 tatttagaag gagaggcaac tattttggat tacgattatt tattagacaa aactgaacca
     3001 attgcgaatg agattttaga agactctttg tatcaatact tagaaaatga gaaaggctat
     3061 gaaatcagtt atgctcaaaa agaaataacc gtggaaccgc tgaacgccga agataaaaaa
     3121 tacttagcat tacatggtga tacgcatgta gttgtcgtaa aaagtaccgt gtttttaaaa
     3181 gatacaacac tttttcaata cacagaatcg cgtcaccgac tggataaatt ccgttttata
     3241 gattttgcaa gaagacgcta aaaagcctga gaattgtttc tcaggctttt tttatcgaat
     3301 taaagttaat gtttcataag gtgctaattc cagctcagaa ctgattgttt gacgttcata
     3361 attagaaaga agtactttag catttaaaaa ctcatttggt agttgaattt ttttcgtagt
     3421 cgagccaaaa tggtgaatgg aaagaagcga agtaatttca tttgaacgct tataggctat
     3481 aatcaaatct tcatccgtcc aatatggcgt ataatcaccc gtctgaatga cagggtattc
     3541 tttccgtaat gcaataagct tttggtaaaa atagaaaatg ctcgttttat tagataaggc
     3601 tgcttgaaca tttatttcac ttgcattatc cgctactttt agccatggag taccagttgt
     3661 aaagccagca ttttgcgaat catcccattg cataggtgtc cgactattat ctcgcgaacg
     3721 ctctttgata atcgccataa cttcttgctc actaagtccg tttttttgta aaatatcaaa
     3781 atggttgagc gtttccacat ccacataatc atcaatcgta ggaaattttg gattcatcat
     3841 cccgatttct tcccccatat aaacaaacgg tgtcccgcgc ataaagtgaa tcgttgcgcc
     3901 aaggagggtt gccgaatgat aataatgttc cggtttgtcg gaagcaaagc gaccaagtgc
     3961 tcgaggttgg tcatggttgt tccagaaaag cgcatcccat ccattttctt ctgacatcgc
     4021 gacttgccac gtatggaaaa tagattttaa gttctcgaaa ttcacatccg ctaaacgcca
     4081 tttttctcca tcaggatagt ctaccttcaa atgatggaaa tgaaaaacca tcgataattc
     4141 tttttcgtct ggattactat aacgaatgca gttgtcaata tctgtagagg acatttctcc
     4201 aaccgttata attggcttgt cgccaaaagt tcgttcatgt agttctttta agtaagcatg
     4261 tattcctggt ccatctgtat aaaaacggcg gccgtcgcct tcaaaatcat cttctaaaaa
     4321 cttaggtttg gcaatcacat ttaatacatc taaacgaaaa ccttccacgc ctttatcaat
     4381 ccaaaaattc acgacatcaa agagtgcctc gcgtacattc ggattggccc agtctaaatc
     4441 agcttgcgta acatcgtata aatgcaaata gtactcagag gagtcaggca atttttccca
     4501 agcattacca ccgaatttgg aaacccaatt tgttggaggg gaaccatcgg cttttgctgg
     4561 gcggaaatag tagaaatcac gatagaatgg atcaccagca agcgcttttt taaaccaagg
     4621 atgctctgtt gaagtatgat tcaatactaa gtcaatcata ataccaatat ttcttttttt
     4681 cgcttccttg ataagcgttg tcacatcgtc catcgtacca aataaaggat caaccgcggt
     4741 atagtcagcg atatcatagc cgttatcatt ttgcggagaa ggataaaatg gattcagcca
     4801 aatcatctca attccgagtt tttgtaaata atcaagcttg gcagtgatac cgggaatatc
     4861 cccagtacca tcgccagtcg tatcataaaa ggatttcgga tacacttgat aaattgtttt
     4921 ttgagcaaac tttgtcataa agggaagcct cactttttag ttggttgttt ttgcagattc
     4981 acgatactcc tttttaccaa acgtacgaat tggtgcagta tctactttgt ttaaaatatt
     5041 atatttgcgg aataatacag ttagaatgaa aggaacaaca atcgttatta acatacatac
     5101 tgcaaaaacg gcgtaatatt tagggttaat ggacaagatt ccaggtagtc ctccgacacc
     5161 aattgagtta gccataacac cactagatac agaaaccaca gccgcaattg ccgaacctat
     5221 catggcagct acaaatggat ataagtattt taaattaatc ccgaacatcg caggttccgt
     5281 aacaccaagg taacaagaaa tagttgctgg aattgaaact tgttcttctt tttcattgcc
     5341 acgatgtaag aaaataattg ctagaacagc ggacccttgg gcgatgttag aaagtgcaat
     5401 catcggccag agattcgttc caccaaattg actcattaat tgtaagtcga tggcgttggt
     5461 catatgatgc agtcccgtga caacgagcgg ggcatatagg aagccaaata gtgcggcgaa
     5521 taaccaactt agtccaccag tcaagccagc ataaacgacg ttcgaaatcg cgtcgccaat
     5581 tttccaacca attggtccaa gaataacatg agctgcaaga acagtaggta cgagagcaaa
     5641 gaatggaacg aaaatcatcg aaatggcatt tggaataaat ttacgcaacc aaatttcgag
     5701 ataggctagt aagaatccgg ccataatggc aggaataact tgcgcttgat acccaatcat
     5761 ctgtacttga gcaaagccaa agtcccaaac tggaatatcg cctgcttttg tttcaacaac
     5821 gctataagca tttagtaatt gcggggaaac aagcgttaaa ccaaggacaa tcccaagaat
     5881 ttgtgtggtt cccatttttt tcgcgatgga ccatgtaatt ccaactggta ggaagtggaa
     5941 tacagcctca ccgataagcc ataagaaact ataaacacca gcccaaaatg gataaacatc
     6001 cacaatcgtt ttcgtgccgt cttctaaaaa cttaatatct ccaattacgt tacggaaacc
     6061 gagaataaga cccccaacaa caattgctgg aattaatgga gtgaatattt cagctaaacc
     6121 agcaagtaaa cgctgaagaa tactcatatt tttcttcgca tctactttgg catcttcttt
     6181 attgacacct tccacaccac taatttttga aaattcatta taaaaaatag ctacatcatt
     6241 acctataatt acttgaaatt gaccagcttg tgtaaatgtc ccttttactg ctggaatgtc
     6301 ttcgatggct tcaacatcgg cattatctgg attttgcaaa acaaaacgca ttctcgtagc
     6361 acaatgtgtg acagatgata tattttcttt gccaccaatt aactctaaaa gagcgcttgc
     6421 atcttttgta tagtcaacca taaaacttcc tcctttttta acttgtatat acaagttgtt
     6481 cgccattact atactataaa taatttgaaa gcgcaaccac tttatttgtg ctaaaataaa
     6541 aaagaaggag gagtggccat gaaacacgtt agaactgcag caattatcac gcatcaaaac
     6601 aaaattttgc tccactcaaa ccaagaagaa gattactgga cacttccggg cggtgcagtg
     6661 gaaaatgaat caacaaaaga aggattaaaa cgtgaaatga aagaagaact cggggaagat
     6721 gtggctattt tagaattgag cattattgcg gaaaatcgct ttttatatcg cggcgaagaa
     6781 atagatagta ttgagtttta ttatgcggtt aaactgttac cagagagcag tttacttaat
     6841 caacctacat ttacaaaaat agaagaattt ggtcaatacg gggaagaggc atataaactg
     6901 cattttaaat ggttcgatat agacaagttg aaaaatatca ccattttacc aacatttctc
     6961 gaaacagagc tagcaaatct ttcaagtaaa aatattatac atttggaaca gacaacataa
     7021 aaaatcccgc gaaattttta cgtttcgcgg gattttattt aattagttaa agatactaag
     7081 gtaatctctt ttttactgat atctaagaat ggtaatttaa cccgtgtatc taaacaataa
     7141 gcgttataga gtaacggttt taatgttgta gtagaacttt ctacttggcg aacaaaattg
     7201 ccaatttctt gatacaatat ttcaatgttt tttaaactac caattttgga atcgatacga
     7261 ttttcactta cgtttacatt agagttcgta actttttcgt taaattcatc attgatagca
     7321 tctttcgtac gttcgatacg cgtgaaccga gtatcttccc aatcaatttc gatgatatgg
     7381 caatcgtcca gttgaagaaa atcaccagtc caaagtttgc cgtcgatctc gacaatcatt
     7441 ctcgtatcag ggaaaacctc tttgttacgg tattttttga gtaaataatc atacatttgt
     7501 aattgcgcta aacagttatc catgtgtgtc atctccttat gggactatta taacatattg
     7561 tgattatgtg aacaatcttc aatatagaaa tgaatagttg gaactgtaac tttttaacta
     7621 gttatacaaa agtcctaaaa aaagtctgtg aaatagtgaa aataactatc aggtggtata
     7681 ctaataataa gatgaaatgg gagggagaca gatgtacaaa caaatgaaat taaaagctac
     7741 agatggactc gatttgcatt tacatatttg ggatgaagtg aaaaatccag ttggtgtagt
     7801 tcaaattgtt catgggatgg cagaacacgg ggcaagatac ggcttgtttg cggaacgttt
     7861 gaatcaggct ggatatattg tcgtagccga tgatcaccgt ggttttggga aatcagccat
     7921 agatgaggca tctttaggtc atttagatgg agaaactggt tttcaaaata tggtagaaga
     7981 tgaggcggta gtgagaactt atttaaaaga aagctatcct gaattacctt acttcatttt
     8041 tgcgcacagc atgggaagtt ttattatacg aacctttatg gcaaaacacc aagttgatgg
     8101 agtaattctc agcggtagcg gacttcaacc gatagctctt ttaaaaatgg gccaaatgat
     8161 tacaaaacaa agagtgaaaa aagatgatag aaaaagaagt ggttttctaa ataaattagc
     8221 attttggggt tataataaac catttaatga aaatcatcgt tttagttggc tttcgcggga
     8281 tgttgcgatt tatgaagcct atgaacaaga tccattttgc ggtccagtag ttggaacaag
     8341 tggttttttc cataatcttt ttgaagccgt aaaggtaagt caacaaaaag aaacattgga
     8401 aagtgtgcca aaggatttgc cagtgttgtt gctttctgga agtgatgatc cggtagggca
     8461 tttcggaaaa gacacaccta aaattgcttt atccttagaa aaagctgggg tagaggatgt
     8521 tacttataaa atttatgaag atgctcgtca tgaactggtg aatgaaatat gtaaagaaac
     8581 tgtttttcaa gatgtaattg attggttgaa tgaaaaaaga aggtagccta aaatcatagg
     8641 ctaccttctt tttaattgcg gatttgaccg tctccaaaaa taatatattt agtggatgta
     8701 agttctgtta agcccattgg tccacgtgca tgaagttttt gagtactaat gccaatttca
     8761 gcgccaaatc ccatggcaaa accatcagtg aatcgagtag aagcattgat ataaacggct
     8821 gctgcgtcta ctttttgatg gaatgcttga ccagtcgcgt aatcattaga aataattgct
     8881 tctgagtgct tggtgccata tttattaata tgatcaatag cctcttcagc ggaatcgact
     8941 actttaatag ctaaaatgaa atctaaaaat tcatcttccc agtcggactc tgtcgcagct
     9001 tttgcctctt gtaaaatttc cttcgcacgt tcatccgcac gtagttcgac atcatattct
     9061 tttagcgcag tttccatcgc tggaagataa tcttcggcga catctcgatg aatgagcaaa
     9121 gtttctgcag cattgcatac agaagggcgc gaacacttag cattaactaa aatatctata
     9181 gccatttgtt tctctgctgc tttatctacg taaatatgac aattaccagt acctgtttcg
     9241 atgactggaa cagttgcatt ttcaagaact gtttgaatta accttgcgcc cccacgagga
     9301 atgagaacat ctaaaaagcg atttaaccgc atcatgtctc tagcagtttc tcgtgatgta
     9361 tcttcaatta attggacact agaacgaggg aaaccagatg cctcaaggga atcctgaata
     9421 acggacatta aggctttatt ggaatcaata gcatcactac cacctcgcaa aatcaccgca
     9481 tttccagttt taaaacaaag aacagaagca tcgacagtta cattgggcct agattcataa
     9541 ataataccaa taacaccaag tggaactctt gttttaccaa tagttaactc ggcttcattt
     9601 ttccacatat ttgttacttc accgattgga tcttttaacg cgaccacttg tttaaccgct
     9661 tccgatatct ctttgattct ttcttctgta agacgaagac gatcaatcat cgtttcaggt
     9721 gttccttttt gcttagcgcg aagaatgtcc ttttcatttt cttgcaaaag tgtagccgta
     9781 tggataagca aatcattact taaattaagc agtgctgcgt ttttgtgttt tgttgttgct
     9841 tgtgctagaa attgggcagc ttctttagcg ccactccctt ttttaatgag ttcggtcatg
     9901 tgaaagttcc tcctttttac ttgcgaataa agtaccaatt tgttcacctt gcataatatt
     9961 aaaaatgacg gtagggtttt taccgtttgt taaaatcatt ttttggttag aatccataca
    10021 ataagaagca gcagaaagct tggtcaacat accaccagtc ccaaatttag aaccgcgtcc
    10081 tccagcaagg gcttcaattt ctggagtgat ttggttgatt tcagagaaca taacagcctc
    10141 tggatctgtt gcagggttac taccataaaa gccgtcaata tcagaaagca taataagcaa
    10201 atcagcttga accagtttag cgacaatggc tgaaagaaga tcattatccc cgtatttcgt
    10261 tacatgctcc agttcttcta cagcaacggt atcattttca tttacgatag ggataatacc
    10321 ccggcttaat aaactgtcta aagtattcat aacattttcg cggctaatag ggaagtcagt
    10381 tacatcacgt gtaagcaaca cctgtccaac cacttgtcca tattcaccaa aaaatttact
    10441 ataaatatgc attagttcac tttgaccaac cgacgcgaca gcttgaaggt cagggatact
    10501 tgtaggtctt actgaaagct gtaatttatg acaaccaaca ccgattgccc cagaagaaac
    10561 aagaatgacc tcttttcctt cgtt
//
LOCUS       DASDYO010000111        10535 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.111, whole genome shotgun sequence.
ACCESSION   DASDYO010000111 DASDYO010000000
VERSION     DASDYO010000111.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10535)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10535)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10535
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.111"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..844)
                     /locus_tag="U0290_002339"
     CDS             complement(<1..844)
                     /locus_tag="U0290_002339"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464550.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FUSC family protein"
                     /protein_id="HEM2302375.1"
                     /translation="MKKISMRERFALDPRVIKVLISITIAVILFPIMGDWIVYPTYVF
                     NAIYITAQMSKGDTYKSSIERIIGTIVGGLLAAFVYLLVPNHHYIMIPIGAALAVMLS
                     YLFTKKFTMVIVVITVMVLVGKGDGEPIVFLRDRLFDTMIGLVIGFVVYALYPRKKNK
                     KLNQVFISQEKAVLEKIKEIDINSEDAKSLAPKIKGLWKQLIDLRKTREQIITDSSFV
                     ASLTSDEPMLHFTHLVEQAINNIEILYHVTLEKESEPNYEVVFAYHQQACAKVITEMD
                     ALITK"
     gene            complement(841..1761)
                     /locus_tag="U0290_002340"
     CDS             complement(841..1761)
                     /locus_tag="U0290_002340"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464549.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302376.1"
                     /translation="MKKFLLDKIGARGLIQMLQAFIYASICVVVHTVIFPDLAGVLPI
                     VVLIGIISMQPTYGITRKVIPQIALAFTLACIFVIISTYFFPINVYIYYVVMIVVILA
                     VNFLMPQKYMVMTLAIGTALYFLGTDDLPMPLYTMIIVALMDVFVFFLLVQLVVKYVH
                     LPLEKTVQTIMKQLVGLFDKEIESVFKNNGKFIAKPLYSIFVQSQMFIKEYSASKKAN
                     PRHVELYQALLPNYLQLFFHMQTMEDIGRVGLSEEAKQALAQINVKVSDEINAKEANP
                     VASFHVKKFVENFLAIKVGMKELVEGREQK"
     gene            complement(1916..2575)
                     /locus_tag="U0290_002341"
     CDS             complement(1916..2575)
                     /locus_tag="U0290_002341"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464548.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TrkA family potassium uptake protein"
                     /protein_id="HEM2302377.1"
                     /translation="MKEGFAVIGLGRFGGSICRSLVEQGMEVLAIDSDEERVNEYMSI
                     ATHAVIANSTDENALRQLGIRNFEHVIVAIGEDIQSSILTTLILKEMGVKYVTAKATN
                     DKHAKLLDKIGADRVVHPERDMGRRIAHYIVSKNMLDYLELSDEYSLVEISVSDPRFL
                     GKSLVDLDFRNSFGVNIVGIKKDKQMIITPEANDVLHEGDILIVIGSDDDIERLQEKI
                     Q"
     gene            complement(2594..3232)
                     /locus_tag="U0290_002342"
     CDS             complement(2594..3232)
                     /locus_tag="U0290_002342"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464547.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2302378.1"
                     /translation="MIKVLLVDDHEMVRIGVSAYLSVQDDMEVVGEAENGREGADMAL
                     ELRPDIILMDLVMDEMDGIEATKEIMQNWKEAKIIIVTSFIDDEKVYPALEAGASSYM
                     LKTSTASEIADAIRATYGGDSVLEPEVTGKMMQRLTAKPEKNLHDDLTNRENEILLLI
                     AEGKSNQEIADELFITLKTVKTHVSNILSKLDVQDRTQAAIYAFKHDLVEKK"
     gene            complement(3229..4287)
                     /locus_tag="U0290_002343"
     CDS             complement(3229..4287)
                     /locus_tag="U0290_002343"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464546.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sensor histidine kinase"
                     /protein_id="HEM2302379.1"
                     /translation="MSFSKLMMAVCSGLLLVATAIGTVGYYFFSEGSWYKILIEQKIF
                     YIPFVVFVPLTAISIGLIIGGLLGYFVKQKFESIDFSIRLLGQGDLEKKITSEEDENF
                     LEVQQVYKQIDRLRDKMKAQTILTQKLASDRAESTGQTKEAILSEERHRIARELHDSV
                     SQQLFAAMMLLSALNEQSEKSATPAMQKQLKMVESIVNESQSEMRALLLHLRPTQLEG
                     KSLKTGIEQLLKELTTKLPIEVEWQIEDISLQKGIEDHLFRIVQELLSNTLRHSKAKL
                     LEVRLVTMDNLAVMKVVDDGVGFDMDNVRQGSYGLQNMRERVAEFGGTIKIISFPGRG
                     TSVEIKIPLVAKKDVESE"
     gene            complement(4284..4997)
                     /locus_tag="U0290_002344"
     CDS             complement(4284..4997)
                     /locus_tag="U0290_002344"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464545.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell wall-active antibiotics response protein"
                     /protein_id="HEM2302380.1"
                     /translation="MKKMESSVVFVFLIAIIVGVGLEMLFQWELLILFALGIFFIFTS
                     RKASATKKSARNSLFIGIVFIIIAVLLTTTFKVGLVVAGIYAIIHYISRKRAPQLLML
                     KTREPDSKIDRTDKFIRNQWFGNQRILDVVYEWDDINIQTGIGDTILDLGNTVLPTGE
                     SVIMIRSVSGKIRVLVPFDIGICIEHSAIFGNIQYDKESTSIQNNSIKVYSDNYESSA
                     RKVKIMTSVIFGDLEVIRL"
     gene            complement(5132..6004)
                     /locus_tag="U0290_002345"
     CDS             complement(5132..6004)
                     /locus_tag="U0290_002345"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464544.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S1 RNA-binding domain-containing protein"
                     /protein_id="HEM2302381.1"
                     /translation="MNNYIGKSQIMTVKEIKDTGWLLEKDGVTVFLSKSNTHETELAV
                     GAEVTVFIFVDYDREIAATTIIPKIQVGHYGWGTVTEVRKHLGVFVDIGIEKDVVVSL
                     DDLPALPHLWPKKEDRVMIALRVDEENRVWGVLAEEEQFRAIAVRAEQDLFNHNVEGT
                     IYRLLKVGSFVFTDDFHIGFIHESERTSEPRMGERVKARVIAVKPDGSLNLSLRGRAH
                     EVLNDDAEMILTYLRSVGGEMPFGDKSDPDAIRAKFGISKAQFKRAIGTLLKARRITQ
                     ENGVVTKITEETSD"
     gene            complement(6085..6780)
                     /locus_tag="U0290_002346"
     CDS             complement(6085..6780)
                     /locus_tag="U0290_002346"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464543.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper homeostasis protein CutC"
                     /protein_id="HEM2302382.1"
                     /translation="MLEVIVQNPRDAYLAEKYGANRMEVVSAISEGGLTPSYGAIKEI
                     VRASKLPAMMMIRPHSFSFVYDKAARIVMERDIELAKEVGVQGIVYGGITENGEIDQA
                     LLEKVIEWKGDLDLTFHRALEATKDIEASYQVLRTYGKDINQLLTSGGTANALDSLPR
                     LKRWIQDSEAQPDSFQILVGSGVKPENIATFQATLNHSDYHVGSAAREANDFSKDILK
                     EKIDILQQQINKD"
     gene            complement(6892..7383)
                     /locus_tag="U0290_002347"
     CDS             complement(6892..7383)
                     /locus_tag="U0290_002347"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464542.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucose transporter subunit IIA"
                     /protein_id="HEM2302383.1"
                     /translation="MFKKFLKKSKQEVLFAHVTGQVIALEDVPDPVFNQKMMGEGIAI
                     KPETGTIVAPIDGKIIQLAETKHAFGIRTDMGQEILVHIGLETVSLNGEGFNVLVSVG
                     DKVKVGDPIVEADFDFIEKNAASTVVPMVITNSSEGKYDFDFHAVTKAEAGKTEVITT
                     NLK"
     gene            complement(7498..8400)
                     /locus_tag="U0290_002348"
     CDS             complement(7498..8400)
                     /locus_tag="U0290_002348"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464541.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine/betaine ABC transporter
                     substrate-binding protein"
                     /protein_id="HEM2302384.1"
                     /translation="MLKKLITTAVLAMLIFTLAACGTTLAPYDAKKDLGEQINYTITG
                     IDAGAGIMLATQNAIKDYHLDDDNWQLQTSSTAAMTSTLQKAMKDKRPIVVTGWTPHW
                     MFTKFDLKFLDDPKNVYGNAENIHTIVRKGLKEDKPSAYQVLDNFFWTAEDMSEVMLE
                     VNDGVDPEEAAKKWIKNNPEKVAKWTDGVEKVDGDEIKLTYVAWDSEIASTNVVAEAL
                     KQVGYKPTIQAMEIQPMWASVATDAADGMVAAWLPNTSGIYYKDYKGKFEDLGPNLKG
                     AKIGLAVPKYMTNINSIEDLKTSK"
     gene            complement(8414..9262)
                     /locus_tag="U0290_002349"
     CDS             complement(8414..9262)
                     /locus_tag="U0290_002349"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464540.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="proline/glycine betaine ABC transporter
                     permease"
                     /protein_id="HEM2302385.1"
                     /translation="MPNIPTIPLASWIDKLVDGLTQFEGFFNVITNIIGGIVDAFQWV
                     FDLVPPWLFIILLVFGTFWVNRKGKKWGLIIFEVVGLLLIWNLDFWRDMTQTLTLVLT
                     SSLIALVIGVPLGIWMAKSNIVESIFKPVLDFMQTMPAFVYLIPAVAFFGIGMVPGVV
                     ASVIFAMPPTVRMTNLGIRQVSTELVEAADSFGSTPWQKLWKVQLPMAKSTMMAGINQ
                     SIMLALSMVVIASMIGAMGLGTRVYFAVGRNDAGGGFVAGIAIVIVAIILDRLTQAFN
                     KKAKSE"
     gene            complement(9255..10448)
                     /locus_tag="U0290_002350"
     CDS             complement(9255..10448)
                     /locus_tag="U0290_002350"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464539.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine betaine/L-proline ABC transporter
                     ATP-binding protein"
                     /protein_id="HEM2302386.1"
                     /translation="MSKIKVEELTKIFGKKASKASSLLSQGKSKTEILKETGATIGVN
                     KASFSVEEGEIFVIMGLSGSGKSTLVRLLNRLIEPTSGKIWLDGKELSSLNKKELLEV
                     RRKSMSMVFQNFGLFPNRTINRNVEYGLEIQGMDKEEREKNAAESLALVGLAGYGEQY
                     PSQLSGGMQQRVGLARALANNPDILLMDEAFSALDPLNRKDMQDQLLDLQDKMKKTII
                     FITHDLDEALRIGDHIMIMRDGSVVQTGSPEEILAHPANEYVEKFIEDVDRSKVYTAS
                     NVMIRPEIVNFEKDGPRVALKRMREAGTSSVFVVKRNRELVGIVHAAEVSKLVKENIT
                     SLETALHRDVPTTGLDTPLAEIMDTISTTTIPIAVTEDGKLKGIIIRGSVLAALSGNE
                     VNVNA"
BASE COUNT         3056 a         2284 c         1711 g         3484 t
ORIGIN      
        1 gtttcgtaat aagtgcatcc atctctgtaa ttactttcgc gcatgcttgt tggtgataag
       61 caaatacaac ttcataatta ggttcagact ctttttcaag cgtcacatga tataaaattt
      121 caatattatt aattgcttgc tctactaaat gagtaaaatg aagcattggt tcatcagaag
      181 tcaaactcgc aacaaaactg ctatctgtaa taatttgttc gcgtgttttt cttaaatcta
      241 tcaactgttt ccacaaacct tttattttgg gagctagaga ttttgcatct tcgctattta
      301 tatcaatttc ttttattttt tctaaaactg ccttttcctg agaaataaac acttgattta
      361 attttttgtt tttcttgcgt gggtaaagcg catagacaac aaaaccgatc acaagaccaa
      421 tcatcgtatc aaatagtcgg tctcttaaaa agactatcgg ctctccgtcg ccttttccga
      481 caagtaccat tactgtaata acaacaataa ccatcgtgaa ttttttagta aatagatagc
      541 ttagcataac tgcaagtgct gcgccaatcg gaatcataat ataatgatgg ttgggaacta
      601 gcaagtatac aaaggctgca agcagtccac ctacaatagt accgataatc cgctcaatgc
      661 ttgatttata tgtatccccc ttactcattt gtgcggtaat ataaatagca ttaaatacgt
      721 atgttggata cacaatccaa tcacccataa tagggaataa aatcactgct atcgtaatac
      781 taataagcac tttaataact cgtggatcaa gagcgaaacg ttctctcata gaaatctttt
      841 tcatttctgc tctctccctt ccactaattc tttcattcca accttaatag ctaggaagtt
      901 ctcaacaaat tttttcacgt gaaatgaggc aactggattg gcttctttcg cgttaatttc
      961 atcagaaact ttcacgttaa tctgagcaag ggcctgtttc gcttcttccg acaaaccaac
     1021 tcgtccaatg tcctccattg tttgcatatg aaaaaaaagt tgaagataat taggcagtaa
     1081 cgcttgatac agctccacat gacgaggatt cgctttttta ctagcactat attctttaat
     1141 aaacatttgt gactgaacaa aaatactata caatggtttt gctataaatt taccattatt
     1201 tttaaataca ctttcaattt ccttgtcaaa tagtcctacc aattgtttca taatagtttg
     1261 aacggttttt tcgagtggta aatgtacata ttttacgact aactgcacca gtaaaaagaa
     1321 cacaaacaca tccattaacg cgacaattat catggtatag agaggcattg gcaaatcatc
     1381 tgttccaaga aagtaaagtg ctgtcccaat cgcgagtgtc attaccatat atttctgcgg
     1441 catcaagaaa ttcaccgcca aaataacaac tatcatgaca acatagtaaa tatacacatt
     1501 gattgggaaa aaataggtgc ttataatgac aaaaatacac gctagagtga atgctagcgc
     1561 tatttgggga atgacttttc tggtaattcc atatgtaggt tgcattgaaa taatccctat
     1621 tagtaccact ataggtaaaa ccccggccaa atcaggaaaa ataactgtat ggaccactac
     1681 acaaatgctc gcataaataa atgcttgcaa catctgaata agtcctcgag cgccgatttt
     1741 atcaagcaaa aatttcttca tctgttcccc ctccttctgt ccctttatgt gaagctctgt
     1801 aactataata gaaaataact ggctagatag caagcggtaa ttcgcaaaca ataaaaaaac
     1861 ctaagaatat actagacatg ttgacatatc tctttatatt acataggttt tctttttatt
     1921 gaattttttc ttgtagtcgt tcaatgtcat catccgaacc gataacgatt agaatatctc
     1981 cttcatgtag aacatcattg gcttcaggag taataatcat ttgtttatct tttttaatac
     2041 cgacaatatt gacaccaaaa gagttacgga aatctaaatc aactaggctc tttccaagga
     2101 aacgtggatc agatacagag atttcgacta gactatattc atccgataat tcaagataat
     2161 ctagcatgtt tttcgatacg atgtaatgcg caatacgtcg tcccatgtct cgctcaggat
     2221 ggacaacccg gtctgctccg attttatcaa gcaatttggc atgtttatca ttcgtcgctt
     2281 ttgcggtaac gtattttacg cccatttctt ttaaaataag tgtagttaag atactcgact
     2341 gaatatcctc accaatcgca acgataacat gctcaaaatt acgaatacca agctggcgta
     2401 gcgcgttttc atctgttgaa ttagcgataa ctgcatgggt cgcaatggac atatattcgt
     2461 tgacacgttc ttcatccgaa tcaatcgcaa gtacttccat tccttgctcg acaagtgaac
     2521 gacaaatact tccgccgaat cgcccaagac cgatgactgc aaatccttct ttcatttgta
     2581 cgttacctcc ttgctacttt ttttctacta agtcatgttt aaatgcatag attgctgctt
     2641 gcgtacgatc ttgcacatct aatttcgata aaatattact tacatgcgtc ttcaccgttt
     2701 ttaaagtgat gaaaagttcg tctgcgattt cttggttgga tttaccttcc gcgattaaaa
     2761 gtaagatttc attttcacga ttcgttaaat catcatgtaa gtttttctct ggtttagcgg
     2821 ttagccgttg catcattttg ccagttactt ctggttcaag aacagagtct ccgccgtatg
     2881 tagctcgaat cgcatctgca atttcgctcg ctgttgaagt tttaagcata taactgctcg
     2941 ctccagcttc aagtgccggg tatacttttt catcatcaat aaaacttgta acgataatta
     3001 tttttgcttc tttccagttt tgcataattt cttttgtggc ttcgatgccg tccatttcat
     3061 ccataactaa atccattaaa ataatatctg ggcgtagttc tagagccata tcagcccctt
     3121 cacgaccgtt ctctgcctcg ccaaccactt ccatgtcatc ttgcacagaa agataagctg
     3181 agacacctat acgtaccatt tcatgatcat ctacaagtaa tacttttatc attcgctttc
     3241 cacgtccttt ttcgcaacaa gtgggatttt tatttctaca ctagttcctc ttcctgggaa
     3301 actaattatt ttgatggtgc cgccgaattc agcaactcgt tctcgcatat tttgtaatcc
     3361 ataagagcct tgtcgaacat tatccatatc aaacccaacg ccgtcatcaa ctactttcat
     3421 caccgctaaa ttatccatcg ttacgaggcg tacttctaat aatttagctt tagaatgtcg
     3481 taatgtattg gaaagtaatt cttgaacaat acggaacaaa tgatcctcaa tgcctttttg
     3541 caaactaata tcctcgattt gccattctac ttcgattggc aatttggttg ttaattcttt
     3601 taataattgc tcaataccag tttttaatga tttaccctcg agttgcgttg gacgcagatg
     3661 aagtaaaagc gcccgcatct ctgattggga ttcatttacg atagattcaa ccatttttag
     3721 ttgtttttgc atcgccggtg ttgcgctttt ttcactctgt tcattcaaag ctgataaaag
     3781 catcattgct gcaaaaagct gttggctcac tgaatcgtgt aattctctag caatccggtg
     3841 tctctcttct gacaaaatag cttctttcgt ttggccagtt gattcagcac ggtcgcttgc
     3901 aagtttttgt gtcaaaatcg tttgtgcttt cattttatca cgtaagcggt cgatttgctt
     3961 gtatacttgc tgcacttcta aaaagttctc gtcttcttca ctcgtaatct ttttctccaa
     4021 atcgccttgt ccgagcagcc gaatcgagaa gtcaattgat tcaaattttt gtttaacaaa
     4081 atacccgagc aaaccgccta taattaaacc aatcgaaatg gctgtaagcg gaacgaaaac
     4141 cacaaaggga atgtaaaaga ttttttgttc gatgagaatt ttataccaag aaccttcact
     4201 aaaaaaatag taaccgaccg taccgatggc tgtagcaaca agtagtaacc ctgagcaaac
     4261 agccatcatc agtttcgaaa aactcatagt ctaatcacct ctaaatctcc gaagattaca
     4321 gaagtcatga ttttcacttt tcgtgcggaa ctttcgtaat tatctgagta gaccttgatg
     4381 ctattatttt gaatagaggt gctttcttta tcatattgga tgtttccgaa aattgcggaa
     4441 tgttcaatgc aaataccgat atcaaatgga acaagtaccc gaatttttcc tgagacacta
     4501 cgaatcataa tgacactttc gccagttggt aaaaccgtgt tccctaaatc aagaatcgta
     4561 tcaccaatcc ctgtttgaat attgatgtca tcccattcat acactacatc aagtatacgc
     4621 tggttaccga accactgatt acgaataaac ttatccgtac ggtcaatctt gctgtcaggt
     4681 tctctcgttt tgagcatcaa taattggggt gcccgcttcc tactaatgta gtgaatgatc
     4741 gcataaatac ctgcaacaac aagcccaact ttaaacgtgg ttgtaagtaa cacggcgata
     4801 atgataaata cgataccaat aaataatgag tttcttgcac ttttctttgt tgcgcttgcc
     4861 ttccttgatg taaagataaa aaatatcccg agtgcaaata aaataagcaa ctcccactgg
     4921 aacagcatct ccaaaccaac gccaacaata atcgcaatta aaaatacaaa aacaaccgag
     4981 ctttccattt ttttcaagct gacacacctc cttacgttcc tcttttgaca aagttatttc
     5041 tcgatttttg ctactttgta catgctgtgt taattatagc gaggatttac tgattgaaac
     5101 aaccgcgcta gttggaacat cccctactac tttagtccga tgtttcttcc gttatttttg
     5161 taacgacacc attctcttga gtgattcgtc ttgcttttaa aagcgtacca attgcacgct
     5221 tgaattgggc tttactaata ccaaatttgg cacgaatggc atctggatct gatttatctc
     5281 cgaatggcat ttctccgcca acacttcgca aataagttaa aatcatttcc gcgtcatcat
     5341 ttaatacttc atgtgctcta ccacgaagcg ataaattaag agacccgtcc ggttttacag
     5401 cgataacacg agccttcaca cgttcgccca ttcttggttc cgaagttcgt tcactttcat
     5461 gtataaatcc aatatgaaaa tcatccgtaa aaacaaatga accgactttt aataaacgat
     5521 aaatagttcc ttcgacatta tggttaaata gatcttgttc tgcacgaacg gcaattgcgc
     5581 ggaattgttc ttcttctgca aggacgcccc aaacacgatt ttcttcatcc acacgtagcg
     5641 caatcatcac gcgatcttct tttttcggcc acaagtgtgg taatgcaggt aagtcatcca
     5701 atgataccac cacgtctttt tcaatgccga tatcgacaaa aacacctaaa tgtttacgta
     5761 cttctgtcac cgttccccag ccgtaatgcc ctacttgaat ttttggaata atcgttgttg
     5821 ctgcaatttc gcggtcatag tccacaaaaa taaatacggt tacttctgct ccaacagcaa
     5881 gttccgtttc atgtgtattt gatttagata aaaaaacagt tactccgtct ttttcaagga
     5941 gccatcctgt atctttgatt tctttcactg tcattatttg gcttttgcca atatagttat
     6001 tcactttttt tccacctttt ccttaagaat agtcttgttt cattatagct tatctaagct
     6061 tgtaaggcta cctgctacga agaatcaatc tttgtttatt tgttgctgta aaatatcgat
     6121 tttttctttt aaaatgtctt tggaaaaatc attggcttct ctagccgcac ttcctacatg
     6181 gtagtcgcta tgatttaatg tcgcttggaa ggtcgcaata ttttctggtt tgacgccact
     6241 tccaactaaa atttggaatg aatctggctg tgcttcgcta tcttgaatcc agcgttttag
     6301 gcgtggcaaa gagtcaagtg cgtttgctgt accacctgaa gttaataatt ggttgatgtc
     6361 tttcccatat gtacgtaaaa cttggtaact cgcttcgata tctttagttg cttccagcgc
     6421 ccggtggaaa gttaagtcta aatcaccttt ccattctatt actttttcga gaagagcttg
     6481 atcgatttct ccattttctg ttataccacc ataaacaatc ccttgcacac caacctcttt
     6541 tgcaagctca atatctcgtt ccatgactat tctggctgcc ttatcataga caaaagaaaa
     6601 actatgtggt cgaatcatca tcatcgctgg taacttagag gcacgtacga tttctttaat
     6661 agcaccataa cttggagtca aaccgccttc gcttattgct gaaactactt ccattctatt
     6721 cgcgccgtat ttttccgcta agtaagcgtc tcttggattt tgaactatca cttctaacat
     6781 attattccgc tccttttaat tactaattac cttcattcta cccttttatg acgtgcttga
     6841 atacaaaaaa atccatgaaa agaaaattac cttttcacgg attttgtttc attattttaa
     6901 attagttgta atgacttcgg tttttcctgc ttctgcctta gttacagcat ggaaatcaaa
     6961 atcatattta ccttctgagc tattcgttat aaccattggt acaacagtac ttgcagcatt
     7021 tttttcaata aaatcaaagt cagcttctac aataggatcg cctactttta ctttatctcc
     7081 tacactgact aaaacgttga acccttctcc atttaaggat acggtttcta agccgatatg
     7141 tacaagaatt tcttgtccca tatccgtacg aatgccaaaa gcatgttttg tttctgccaa
     7201 ttgaataatt ttcccgtcta ttggagcgac aatggtacca gtttctggtt tgattgcaat
     7261 gccttctccc atcatttttt gattaaaaac tggatctgga acatcttcta atgcaataac
     7321 ttgcccagtt acgtgagcga atagtacttc ttgtttcgat ttttttaaaa attttttaaa
     7381 catgcatctt cctcctagca atttcatgaa tcaactacta ttttaccctt atagagaaaa
     7441 aaaggcacgg agaaactatc aagcatcact tgattttctt catgcctttt taaacgttta
     7501 tttgcttgtt tttaaatctt caatggaatt aatgtttgtc atgtattttg gaactgctag
     7561 accgatttta gcacctttta agtttggtcc taaatcttca aattttcctt tataatcttt
     7621 gtagtagatt ccggaagtat ttggaagcca tgcagcaacc ataccatcag ctgcatccgt
     7681 agcaacggac gcccacatcg gttgaatttc cattgcttga atcgttggtt tgtagccaac
     7741 ttgttttaat gcttctgcga caacgtttgt agaggcaatt tcagaatccc aagctacata
     7801 agttaacttg atttcatcgc catctacttt ttccacgcca tccgtccatt ttgctacttt
     7861 ttctggatta tttttaatcc attttttagc ggcttcttct ggatctacac cgtcattaac
     7921 ttcaagcatt acttcagaca tatcttccgc agtccagaag aaattatcta gcacttggta
     7981 agcggaaggt ttatcttctt ttaagccttt acgtacaatg gtgtggatat tttctgcatt
     8041 accataaaca tttttgggat catccaaaaa tttcaaatca aattttgtaa acatccagtg
     8101 cggggtccaa ccagtcacaa caatcgggcg cttatctttc atcgcttttt gaagtgtact
     8161 tgtcatcgcc gcggtagaac ttgtttgtaa ttgccaatta tcatcatcta aatggtaatc
     8221 tttaatcgca ttttgtgttg caagcataat tcctgctcca gcatcaattc ctgtgattgt
     8281 ataattgatt tgttcgccta aatctttttt cgcgtcataa ggagcaaggg ttgttccgca
     8341 ggctgctaaa gtgaaaataa gcatagccaa aactgcggtg gtgattaatt tttttagcaa
     8401 tctactctcc tcctcattct gatttcgctt ttttattgaa agcttgtgtc agacggtcta
     8461 ggatgattgc tacgataaca atcgcaatcc cagctacaaa tccgccacca gcgtcgttac
     8521 gtcctactgc gaagtaaaca cgtgttccaa gtcccattgc accgatcatt gaagcaatta
     8581 cgaccatgga aagtgctaac atgatacttt ggttaatacc cgccatcatg gttgatttcg
     8641 ccattggtag ctgtactttc caaagttttt gccaaggtgt tgaaccgaac gaatcggctg
     8701 cttctacaag ctctgttgaa acttggcgaa tacctagatt agtcatacga acagttggag
     8761 gcattgcgaa aataacagaa gccacaaccc ctggaaccat tccaattccg aaaaatgcta
     8821 cggcaggaat taagtaaacg aaggctggca tagtttgcat aaaatcgagt accggtttga
     8881 agatactttc aacaatattg cttttcgcca tccaaatacc aagtggaacc ccaataacaa
     8941 gcgcaattaa actacttgtc agaacgagcg ttaatgtttg tgtcatatca cgccagaaat
     9001 ctaagttcca aattaacagt aaaccgacaa cttcaaagat aattaaaccc cattttttgc
     9061 ctttacggtt tacccaaaat gtgccaaata caagtaaaat aataaataac cacggtggaa
     9121 ctaaatcgaa cacccattgg aatgcatcaa caatcccgcc aatgatattt gtaattacat
     9181 taaaaaatcc ttcaaattgc gttaagccat ccactaattt gtcaatccaa ctagctaatg
     9241 gaatcgttgg aatattaggc attaacgttc acctcgtttc cagaaagtgc ggccagaacg
     9301 gatccgcgaa tgataattcc ttttaatttt ccatcttcgg ttacagcaat cggaatcgtt
     9361 gttgtcgaga tagtatccat gatttctgca agtggcgtat ctaggccagt tgtaggtaca
     9421 tcacgatgta aagctgtttc tagtgaagta atattttctt ttactagttt agaaacttcc
     9481 gctgcatgga caataccaac cagctcacga ttacgtttaa caacgaatac actggaagtt
     9541 ccagcctcac gcatccgttt aagcgcaaca cgaggaccat ctttttcaaa attaacgatt
     9601 tctggacgta tcattacgtt gctcgctgta taaactttgg aacggtctac atcttcaatg
     9661 aatttttcaa cgtattcatt tgctggatgt gccagaattt cttccgggga acctgtttga
     9721 acgacagagc catcacgcat aatcataatg tggtcaccaa tacgtagtgc ctcatccaaa
     9781 tcatgggtaa taaagatgat tgttttcttc attttatctt gtaaatctag taattgatct
     9841 tgcatatctt ttctgttaag tgggtcaagt gcagagaaag cttcatccat gagtaaaata
     9901 tctggattgt tagcaagtgc tctcgcaagc cctacacgtt gctgcatccc accagaaagt
     9961 tgcgaaggat attgttcgcc gtaaccagct aaaccaacaa gtgcaagcga ttctgctgca
    10021 tttttctcgc gctcttcttt gtccattcct tgaatttcaa ggccgtattc tacgttacga
    10081 ttaatcgttc tattcggaaa taaaccaaag ttttggaaga ccatactcat gctttttctt
    10141 ctaacttcca aaagttcttt tttatttaga ctagatagtt cttttccgtc aagccaaatt
    10201 tttccgctcg taggctcaat tagacggttt aaaagtcgta ccaaagtcga cttcccacta
    10261 cctgaaagcc ccataataac gaaaatttct ccttcttcta cgctaaaaga tgctttatta
    10321 acaccaatag tcgcccctgt ttctttcaaa atctctgttt tcgatttccc ctgagaaagt
    10381 aaagaagatg ctttagaagc cttttttcca aaaatcttcg ttagctcttc tactttaatc
    10441 ttgctcaaaa taaaatcccc tttctttttt tagattgaat tatttattag gcaaaaattc
    10501 ggcccatatc acttttaaaa aaagcaataa cattt
//
LOCUS       DASDYO010000112        10473 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.112, whole genome shotgun sequence.
ACCESSION   DASDYO010000112 DASDYO010000000
VERSION     DASDYO010000112.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10473)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10473)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10473
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.112"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1145
                     /locus_tag="U0290_002351"
     CDS             <1..1145
                     /locus_tag="U0290_002351"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302387.1"
                     /translation="RYLDSSTDGEYTEEAKDLIEVLLEETPFGETIENGFSKLEQEFY
                     SYKKEINRYLAEEDSAAACDILRKVIDEKPNFWPAYNQLASLYFEQLKEEEGVRVLSD
                     LLSRNPGNLLGICDLFIYHFYKGNRKEADELYLELRDVLPVLAHHKEKLGLIHAMMGE
                     YEEADDLLEQVADLEVTERSKYYYFRAKSSYYLGDVEGAKMFWHSFLECDLYEDVRFP
                     WEQEADLTNDTRLVLEMLQEEDDLTHMLGVYALTISGNRPELVLFHPLLDMSDWSYME
                     HLMFTNFDYFPDGAIEQNGYLIAKAMIILKENGVLLNEENMALYKQMFSLVLIDAGKD
                     LILGRYTIETVASAIAKLFLPHLKLELVEEFECSKCARDIERVLSR"
     gene            1224..2183
                     /gene="trxB"
                     /locus_tag="U0290_002352"
     CDS             1224..2183
                     /gene="trxB"
                     /locus_tag="U0290_002352"
                     /EC_number="1.8.1.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466001.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thioredoxin-disulfide reductase"
                     /protein_id="HEM2302388.1"
                     /translation="MASEEKIYDVIIIGAGPAGMTAALYTSRADLDTLMIERGVPGGQ
                     MVNTAEVENYPGFDSILGPDLSDKMLSGAKQFGAEYAYGDIKEVVDGKEFKTVTAGSK
                     TYKARAIIIATGAEHRKLGAAGEEELSGRGVSYCAVCDGAFFKNRELIVVGGGDSAVE
                     EGTYLTRYADKVTIVHRRDKLRAQQILQDRAFKDEKVDFIWNSTVEEIVGDGKKVTGA
                     KLVSTVDGSESIMPVDGVFIYVGLVPLTKAFLNLGITDDEGYIVTDEEMRTNLPGIFA
                     AGDVRAKSLRQIVTATGDGGLAGQNAQKYVEELKESLEAEAAK"
     gene            2303..3286
                     /gene="galE"
                     /locus_tag="U0290_002353"
     CDS             2303..3286
                     /gene="galE"
                     /locus_tag="U0290_002353"
                     /EC_number="5.1.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-glucose 4-epimerase GalE"
                     /protein_id="HEM2302389.1"
                     /translation="MSIVVLGGAGYIGSHAVDELITRGYEVVVIDNLRTGHKESIHTK
                     AKFYEGDIRDKAFLSSVFEKEKVDGVIHFAASSLVGESMEVPLVYLNNNVYGTQIVLE
                     VMEQFGVKHIVFSSSAATYGEPERVPITEDMPTNPESTYGETKLIMEKMMKWCDKAYD
                     MKYVALRYFNVAGAKADGSIGEDHKPESHLVPIILQVALGQREKLAIYGDDYNTPDGT
                     CIRDYVQVEDLIDAHIKALEYLKNGGESNIFNLGSSNGFSVKEMLEAARTVTGKEIPA
                     EVVPRRAGDPGTLIASSDKAREILGWEPTYTDVKDIIATAWKWHVSHPNGY"
     gene            3303..4364
                     /locus_tag="U0290_002354"
     CDS             3303..4364
                     /locus_tag="U0290_002354"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465999.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="galactose mutarotase"
                     /protein_id="HEM2302390.1"
                     /translation="MIFIEVMKERFGEFEGETVWKWTMVNDHGMRMSVLNYGAIVTSL
                     ETKDKFGDFANISLGFTNLDDYLAHSPYFGATLGPVAGRITNGQFSLDGKQFQLIQNE
                     GANHRHGGKFNFSKKLWDVSVEKSLDQIVMTFEYCWADGENGYPGNIDAKMTYTLNNK
                     NEWLLDYEAKSDQPTIYNPSNHIYFNLSGEAGSTVLQHQLWVNSDSFLPIDEEFLPIG
                     EKRLAENTIFDLRAGREVAEITQSQDQQVKLVGAGLDHAFILKHENSRPDAVLFDPKS
                     GRRLEMETKADSVLIYTANSLDGSFEIGERTVPKYAGITMETQGLVDAINHDGFGDIV
                     LRPEKPFTSRTAFRFTVES"
     gene            4406..6136
                     /locus_tag="U0290_002355"
     CDS             4406..6136
                     /locus_tag="U0290_002355"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465998.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phospho-sugar mutase"
                     /protein_id="HEM2302391.1"
                     /translation="MNWQEEYQKWVANDKLDSTLRKQLTNMEANEKELEDSFYRNMEF
                     GTAGMRGVLGAGTNRMNIYTIRKASLGLAQFVAENGDEAKKRGIVIAYDPRHMSREFA
                     FESAAVLGHHGVKSYVFDALRPTPELSFAVRHLNAFGGIVITASHNPPEYNGYKIYGE
                     DGGQMPPTGASAVIEYINAVEDIFSVEVANQELLIENGLLEVISEKVDRPYLEKLKEV
                     IVNKELVQERGEDLKIVFTPLHGTGGILGVPALESVGFTNIVKVDEQFVNDPDFGTVK
                     SPNPENREAFLLAIEYGKKFGGDILVGTDPDADRLGVAVRNLDGEYEVLSGNQIGAII
                     LHYLLKQKKAQNELPANAAVLKSIVTSNLGTEIAKHYGAEMIEVLTGFKFIAEQIKHF
                     EETGKHTFEFGYEESNGYMVKPFTRDKDAIQAVLAIAEVALVSKVEGGSLLEDLEQIY
                     AEFGYYKEDLVSLTLSGKDGSRRIKEITSNFREQLPTSMGGFPVERAEDYLRSETTWI
                     ATGKTEAIHLPTADVIKCYFEDGSWFCLRPSGTEPKIKFYFSIRGESKEESATKLEKV
                     KADLMQHIEA"
     gene            6244..7119
                     /gene="rapZ"
                     /locus_tag="U0290_002356"
     CDS             6244..7119
                     /gene="rapZ"
                     /locus_tag="U0290_002356"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNase adapter RapZ"
                     /protein_id="HEM2302392.1"
                     /translation="MASKQLKLVIITGMSGAGKTVAMQSLEDLGYFCVDNLPPSLLPK
                     FWELMKESDKMDKIALVMDLRGREFFDSIEPALDELDNTNFITTKILFLEADDKVLVS
                     RYKETRRHHPLEPNGSVLDGINAERELLSDLKGRSQLVINTSNMAPRELRERINNEFQ
                     TEDKDIFNVQLMSFGFKYGIPIDADLVFDVRFLPNPHYIDKMRPLTGLDEDVYEYVMK
                     WPETQTFLDKLVDLLMFTLPFYKREGKTQLVIAIGCTGGQHRSVALTEFVGKAIQQKY
                     ETTISHRDMKRRKGR"
     gene            7121..8089
                     /locus_tag="U0290_002357"
     CDS             7121..8089
                     /locus_tag="U0290_002357"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465996.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YvcK family protein"
                     /protein_id="HEM2302393.1"
                     /translation="MKKEMKPKVVVIGGGTGLPVILKGLKKKDIHLTAIVTVADDGGS
                     SGKIREQMDVLPPGDIRNVMLALSNVDPRVVDLFQYRFAVDGDLSGHVIGNLILTALS
                     QLNDSYVDAINVLATVLKIRGKVIPATDQPLILNAEMEDGSIVHGESLIPLQGKHINR
                     VYIEPENVKPYPTAVEAVKEADLIVIGPGSLYTSILPNLLLTELADEIIASKAPKVYI
                     TNILTQIGETDFFSDADHIKVIHEHVGKSFIDKTLINTTTVPKELLFPEDVAQVEHNA
                     KGMEELGVEAIYQDFLSTEDGLVRHAAEKVADAVLAMLPNQTIEKE"
     gene            8097..9068
                     /gene="whiA"
                     /locus_tag="U0290_002358"
     CDS             8097..9068
                     /gene="whiA"
                     /locus_tag="U0290_002358"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-binding protein WhiA"
                     /protein_id="HEM2302394.1"
                     /translation="MSFASETKKELTHMDVSDSDAKVELAAFIRMNGAISFSNQLVIM
                     DVQTENAAIARRMYQLLKDLYEVPIELLVRRKMKLKKNNVYIVRLKSGTRGILEDLRI
                     LEPPMTFTKSIDRGFVKKRSAKRAYLRGAFLASGSVNNPETSSYHLEIFSVYEEHNEA
                     ICALMNQFDLNARTLERKNGFITYLKEAEKITEFLSIIGATSALLHFEDVRIMRDMRN
                     SVNRLVNCETANLNKTINAAVRQIDNIKYIQSTVGLEALPERLREIAALRIANEDVTL
                     KELGEMLTTGQVSKSGINHRLRKLDQIAERLRSGETPAQVGLKISNS"
     gene            9095..10111
                     /gene="namA"
                     /locus_tag="U0290_002359"
     CDS             9095..10111
                     /gene="namA"
                     /locus_tag="U0290_002359"
                     /EC_number="1.6.99.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465994.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADPH dehydrogenase NamA"
                     /protein_id="HEM2302395.1"
                     /translation="MSKLFSEYKLKDVTLKNRIVMSPMCMYSVENKDGIATDFHFAHY
                     VSRAAGGTGLVILEATAVQEVGRISEFDLGLWNDEQVPALKKLVDGLHYHGAKAGIQL
                     AHAGRKAVLPGEIVAPSAIAFDEKSDKPVELTKEAIKEVVADFKRAAYRAKEAGFDVI
                     EIHAAHGYLIHQFLSPITNRREDNYGGPAGNRYKILSDIIKAVKEVWDGPIIVRVSAT
                     DYAHGGLQLEDHIPFAKWMKADGVELIDVSTGGLVNVAPPVFPGYQVPFADEIRRGAG
                     IATGALGLITRGEQAEEILCNERADLIIVGRELLRNPYFAKDAAKQLGETIEGPKQYS
                     RAWK"
     gene            complement(10164..>10473)
                     /locus_tag="U0290_002360"
     CDS             complement(10164..>10473)
                     /locus_tag="U0290_002360"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HEM2302396.1"
                     /translation="IYVQSQNGELPDQTINQGNTCTIDLPIYFQMEEINMLVSPEVTG
                     EYIGTNIVQLPTTVNAEDNSITVDTSALSPGEYKLDISYNHNYATGGVCSYDWNVTIN
                     "
BASE COUNT         3331 a         1630 c         2481 g         3031 t
ORIGIN      
        1 atcgttattt ggatagttca actgatggtg aatataccga ggaagctaaa gatttaattg
       61 aagttttatt agaagaaacg ccttttggtg agacaattga aaatggcttt tctaaattag
      121 aacaagaatt ctattcttat aaaaaagaaa ttaatcgtta tttagcagaa gaagatagtg
      181 cagctgcttg cgatatttta agaaaagtca ttgatgaaaa accgaatttt tggcctgctt
      241 ataatcaact cgcttcgctt tattttgagc aattgaaaga agaagagggc gtcagagttt
      301 taagtgattt attatcgaga aatccgggta atctcttggg tatttgtgat ttatttattt
      361 atcactttta taaggggaac cgtaaagagg cggatgagct ttatctggaa cttcgggatg
      421 tcctaccggt tctagcgcat cataaagaga agcttggtct gattcatgcg atgatgggtg
      481 aatacgagga agcggatgat ttgcttgaac aagtggctga cttggaagtg actgagcgta
      541 gtaagtatta ttatttccgt gcgaaatctt cctattattt aggggatgtg gaaggggcaa
      601 aaatgttttg gcattccttt ttagagtgtg atttgtatga agatgttcgg tttccgtggg
      661 agcaagaggc ggatttaacg aatgacacgc gactggtgct tgagatgctt caagaggaag
      721 atgatttgac tcatatgcta ggtgtttatg cattaactat ttctggaaat cgtccggagt
      781 tagtattatt ccacccgtta cttgatatga gcgattggtc ttacatggag catttaatgt
      841 ttactaattt tgattatttt ccggatgggg ctattgaaca aaatggttat ctgattgcaa
      901 aagcgatgat tattttaaaa gaaaatggtg ttttgttaaa tgaagaaaat atggcgttat
      961 ataagcagat gttttcgtta gttttaatag atgctgggaa agatttaata cttggtcgtt
     1021 atacgataga aactgtggct agtgcgattg ctaagctgtt tttacctcat ttgaagcttg
     1081 aattagtaga agaatttgaa tgtagtaaat gtgcgcgaga tattgagcga gttctgagca
     1141 gataaataga cctttttgct attccgtatt aggattaatt taggctaact attgtataca
     1201 cataaacgag gagggcaaaa agaatggcta gtgaagaaaa aatttatgat gtgattatta
     1261 ttggagcggg accagctgga atgacagctg ctttatatac ttcccgtgca gatttagata
     1321 cgttaatgat tgaacgcgga gtacccggcg gacaaatggt taacacagct gaggttgaaa
     1381 attaccctgg atttgatagt attttaggac cagatttatc cgataagatg cttagcggtg
     1441 cgaaacaatt tggcgctgag tatgcttatg gggacattaa agaagtcgtt gatggcaaag
     1501 aatttaaaac tgtaacggct ggatcgaaaa cctataaagc tcgggcgatt attattgcga
     1561 ctggtgctga acaccggaaa cttggtgcag ctggcgaaga agagcttagt ggacgcggcg
     1621 tttcttattg tgctgtttgt gatggagctt tcttcaaaaa tcgcgaatta atcgtggttg
     1681 gcggcggaga ctctgcagtg gaagaaggaa cttatttgac tcgttatgca gataaagtaa
     1741 cgatagtaca ccgtcgtgat aaattgcgcg cacaacaaat tttacaagat cgtgctttca
     1801 aagatgaaaa agttgatttc atttggaata gtacagtaga agaaattgtt ggcgatggca
     1861 aaaaagtaac tggagcaaaa cttgtttcca cagtggatgg ttccgaatct attatgccag
     1921 tggatggtgt tttcatctat gttggacttg ttccacttac gaaagcattc ttaaatttag
     1981 gtattacaga tgatgaagga tacatcgtaa cggacgagga aatgcgtaca aaccttcctg
     2041 gtatttttgc agctggtgat gttcgtgcga aaagcttacg ccaaattgta acagcaacag
     2101 gcgatggcgg acttgctgga caaaacgctc aaaaatatgt agaagaatta aaagagtcgc
     2161 tagaagcaga ggcagctaaa taacagtaaa gaaaactcga atgggtctga gattatttat
     2221 cttagaccca tttttgcgtg actatataga cttgagtagt gtaaaatgga agacaaagac
     2281 tattgttagg agagagataa taatgagtat tgttgtactt ggtggcgctg gctatatcgg
     2341 ttcacatgca gtagatgagt taattactcg cggatatgaa gtagtagtta ttgataattt
     2401 aagaacaggg cacaaggaat ccattcatac aaaggcaaaa ttttatgaag gagatattcg
     2461 agataaggca tttttaagtt cagtttttga aaaagaaaag gtagatggtg tgattcactt
     2521 tgctgctagt tcacttgtag gagaatcgat ggaagtaccg cttgtttatt taaataataa
     2581 tgtttatggt acgcaaattg tcttagaagt gatggagcaa tttggtgtga agcatattgt
     2641 cttttcttct agcgctgcaa catatggtga gccagaacga gtaccgatta cggaagatat
     2701 gccaacaaat ccggaaagta cttacggcga aacgaagcta atcatggaaa aaatgatgaa
     2761 atggtgcgat aaagcgtatg atatgaaata tgttgcactc cggtatttta atgttgctgg
     2821 cgccaaagcg gatggttcaa ttggggaaga tcacaaacca gaatcacact tagtcccaat
     2881 tattttacaa gttgcgcttg gtcaacgaga aaaattagcg atttacggtg acgactacaa
     2941 tacgcctgat ggtacttgta ttcgtgatta tgtacaagta gaagatttaa ttgacgcgca
     3001 tattaaagcg ctagaatact tgaaaaatgg cggggaaagt aatattttca accttggtag
     3061 cagtaacggt ttttcagtga aagaaatgct tgaagcagct cgtactgtaa caggtaaaga
     3121 aattccagct gaagttgtac cacgccgtgc aggagatcca ggaacgttaa ttgcttcaag
     3181 tgataaagcg cgtgaaattc ttggttggga gccaacttat acagacgtaa aagatattat
     3241 cgccactgct tggaaatggc acgtatctca tccaaatggc tattaataac ttatgaagga
     3301 atgtgatttt tatcgaagta atgaaggagc gatttgggga gtttgaggga gaaactgttt
     3361 ggaagtggac gatggtaaat gatcatggta tgcgcatgag tgttttaaat tacggagcga
     3421 ttgttacttc ccttgaaaca aaagataaat ttggtgattt tgcgaatatt agtcttggtt
     3481 ttacaaattt agatgattat ttggcacact ccccatactt cggcgcgaca cttggccctg
     3541 ttgctggacg cattacaaat gggcaattta gtttggacgg taaacaattt caactgattc
     3601 aaaatgaagg agctaaccat cgtcacggtg ggaaattcaa ttttagtaag aagctttggg
     3661 atgtttcagt agaaaaaagt cttgatcaaa ttgtgatgac ttttgaatac tgctgggcgg
     3721 atggagaaaa tggctatcca ggaaatattg atgcaaaaat gacatatacg ttaaataata
     3781 aaaatgaatg gctgcttgat tatgaagcga aaagcgatca gccgactata tataacccga
     3841 gcaatcatat ttattttaat ctaagcggag aagctggttc aacggtttta caacatcagc
     3901 tttgggttaa tagtgacagc ttcctaccaa ttgatgaaga gtttctccca attggggaaa
     3961 agcggttagc ggaaaatact atctttgatt tgcgtgcagg tcgtgaagta gcggagatta
     4021 cacaaagtca ggaccagcaa gtaaaattag ttggtgcggg gctggatcat gcattcattt
     4081 taaaacatga aaatagtcgt ccagatgcag ttttgtttga tccaaagtca ggacggcgct
     4141 tggaaatgga aaccaaagct gactcggtat taatttatac ggcgaatagt ttggatggct
     4201 cttttgagat tggcgagcga actgtgccaa aatatgctgg cataacaatg gaaacacagg
     4261 gtttagtaga tgcgattaac catgacggat ttggtgatat tgtacttcga ccagaaaaac
     4321 cttttacatc tagaacagct tttcgtttca cagtggagag ctgataaatt ttaattaaag
     4381 agttctaaat gaaggagtgt agagaatgaa ttggcaagaa gaatatcaaa aatgggttgc
     4441 taatgacaaa ttagatagca cattaagaaa acaattaacg aatatggaag caaatgaaaa
     4501 agaacttgag gatagttttt atcgtaatat ggaatttgga acggctggga tgcgtggtgt
     4561 actaggcgct ggaacaaacc gcatgaatat ctatactatt cgtaaggctt ctctaggttt
     4621 ggcgcaattt gtggcggaga acggtgacga ggctaagaag cgcggaatag taattgcgta
     4681 tgaccctcgt catatgtcac gcgaatttgc ttttgaatcg gcggcggtat tagggcatca
     4741 tggtgtgaaa agctatgttt ttgatgcgct tcgaccaaca ccggaacttt cctttgcagt
     4801 acgtcattta aatgcgtttg gtgggattgt tattacagct agccataacc caccagaata
     4861 caatggctac aagatttatg gtgaagatgg cggacaaatg cctccaacag gggcaagtgc
     4921 tgtaattgaa tacataaacg cggtagagga tattttttct gtagaagtag cgaaccaaga
     4981 gctattaatt gaaaatggtt tacttgaggt aatcagtgaa aaagtagacc gtccatattt
     5041 ggaaaaatta aaagaggtta ttgtcaataa agagcttgtt caagaacgag gggaggattt
     5101 gaaaattgtt ttcacgcccc ttcatggtac tggcggaatt cttggcgttc ctgcgcttga
     5161 aagtgttggc tttacgaata ttgttaaggt tgacgagcaa tttgtgaatg atcccgattt
     5221 tggaacggta aaatcgccta acccggaaaa ccgcgaagcc tttttacttg cgattgaata
     5281 tggtaagaag tttggtggcg acattttagt cggaacagat ccggatgctg accgtttagg
     5341 cgtggcagtt cgtaatcttg acggcgaata tgaagtgtta tctggaaacc agattggcgc
     5401 gattatttta cattatttat taaaacaaaa gaaagcgcaa aatgaattgc cagctaatgc
     5461 agcggtatta aaatctattg taacaagtaa tcttggaaca gaaatcgcga aacattacgg
     5521 tgcggaaatg attgaagtat taactggttt caaatttatt gcagaacaaa ttaagcactt
     5581 tgaagaaact ggcaagcata cgtttgaatt tggttatgaa gaaagtaatg gttatatggt
     5641 taagccgttt acgcgtgata aagatgcgat tcaagcggtg cttgcgattg cggaagtggc
     5701 gctcgttagc aaagtagaag gtggaagttt actagaagat ttagagcaaa tttatgctga
     5761 gtttggctat tacaaagaag atctagtttc cttaacttta agcggtaagg atggttctcg
     5821 gcgcatcaaa gaaattacaa gtaattttcg cgagcaacta ccaacaagta tgggtggatt
     5881 ccccgtggaa cgtgcggaag attatttaag aagcgaaaca acttggattg ctaccggaaa
     5941 aacggaagcg attcatttgc caacagcaga tgtcattaaa tgttattttg aagatggttc
     6001 atggttctgt ttacgtccat ccggcacaga accgaaaatc aaattctact ttagtattcg
     6061 tggtgaaagt aaagaagaaa gtgcaacaaa attagaaaaa gtgaaagctg atttgatgca
     6121 acatatcgaa gcttaaaaag aaaaatcccg gaaactcgct ttagagactt ttccgggatt
     6181 ttctagtgag aagtgtgcta aaatggaaga tagatattat ttgtgcgaaa ggatgaggca
     6241 gatatggctt ctaaacaatt aaaattagta atcattactg ggatgtctgg agcaggaaaa
     6301 acagtcgcaa tgcagtcttt agaagatctc ggttattttt gtgtagataa tttaccgcca
     6361 agtttacttc caaagttctg ggagctaatg aaagaaagcg ataaaatgga taaaatcgcg
     6421 ctcgtaatgg atcttcgcgg ccgtgagttt ttcgattcca ttgaaccagc gctagatgag
     6481 ctagataata ccaattttat aacaacgaaa atcctctttt tagaggctga tgataaggta
     6541 cttgtttcgc gttataaaga aacgcgccgc caccatccac tggagcctaa tgggtctgtg
     6601 ctagacggga ttaatgcaga gcgcgaactg cttagtgatt taaaaggccg ttcgcagtta
     6661 gttattaata catcgaatat ggcgccacgt gagttacgcg agcgaattaa caatgaattc
     6721 caaaccgaag ataaagatat attcaatgtg caattgatgt catttggttt caaatacggc
     6781 attccgattg atgctgattt agtgtttgat gtgcgctttt taccgaatcc gcattacatt
     6841 gacaaaatgc gtccgttgac aggacttgat gaagatgtgt atgaatatgt gatgaaatgg
     6901 ccagaaacgc agaccttttt agataagtta gtagatctat taatgtttac acttcctttt
     6961 tacaaacgag aaggaaaaac acaattagtt attgccattg gatgtactgg aggacagcat
     7021 cgttcagtag ctttgacaga gttcgttggt aaggcaattc aacaaaaata tgaaacaacg
     7081 atttcacacc gagatatgaa acgtagaaag ggccgttaat atgaaaaagg aaatgaaacc
     7141 taaagtagta gtaatcggtg gcgggaccgg tcttccagtc attttaaaag ggcttaaaaa
     7201 gaaggatatt catttaacgg ccattgtgac cgtagcggac gatggtggta gttctggtaa
     7261 aattcgcgag caaatggatg tgcttccccc aggtgatata cgcaatgtca tgctagcttt
     7321 atccaatgtt gatccacggg ttgtcgattt atttcaatat cgttttgcgg tagatggtga
     7381 tttatcgggg catgttattg gaaatttgat tttaacggct ttatcgcaat tgaatgatag
     7441 ttatgttgat gcgattaatg tgctagcaac ggtgctgaaa atccgcggca aagttattcc
     7501 agcaacggat caaccactca tcttaaatgc cgaaatggaa gatggttcta ttgtgcacgg
     7561 tgaatcgctt atcccgttac aaggaaagca tattaatcgt gtgtatatcg aaccagaaaa
     7621 tgtaaaacca tatccgacag cagtcgaagc agtgaaagag gctgatttga ttgttattgg
     7681 tccaggaagt ttatacacaa gtattttacc aaatctatta cttacggaat tagccgatga
     7741 aattatagca agtaaggctc cgaaagtata cattacgaac attttaacgc aaattggcga
     7801 aaccgacttt ttctcagatg cggatcatat taaagttatc catgagcatg tgggaaaatc
     7861 ttttatagat aaaacgttaa ttaatacgac gactgttccg aaagaacttt tattcccaga
     7921 ggatgttgcg caagtagagc ataatgccaa aggaatggaa gagcttggcg tagaagccat
     7981 ttatcaagat tttctttcta cagaggatgg ccttgtgcgc catgctgctg aaaaggtggc
     8041 ggacgcggtt ttagcgatgt tacctaacca aactattgaa aaggagtgag taagccatgt
     8101 catttgcatc ggaaaccaag aaagaattaa cccatatgga cgtaagtgat agcgatgcaa
     8161 aagtggaact cgcagctttt attcgaatga atggtgccat ctcgttttcg aatcaattag
     8221 tgataatgga tgtccaaacc gagaatgcag ccatagctag acgaatgtat caattactga
     8281 aagacttata cgaagtgcca atagaacttc ttgtacgtcg caaaatgaag ttgaaaaaaa
     8341 ataatgttta tatagttcgc ttgaagtcag gtacacgggg gattttggaa gatttacgga
     8401 tactagagcc accgatgacg tttacgaaat cgattgatag gggatttgtt aagaagagga
     8461 gcgccaaacg tgcttattta cgtggagcct ttttggcaag tgggtcagtt aataatccgg
     8521 aaacttcttc ttatcattta gaaattttct ctgtttatga ggagcacaat gaggcgattt
     8581 gcgctttgat gaatcaattc gatctcaatg cgcgaacgct tgaacggaaa aatggtttta
     8641 ttacctattt gaaagaagcg gaaaaaatca cggaattctt gagtattatc ggagcaacta
     8701 gcgcgcttct tcattttgag gatgttcgga ttatgcgtga tatgcggaat tcggtgaaca
     8761 ggctagtgaa ctgtgaaacg gcgaatctca acaagacaat taatgcggct gttaggcaaa
     8821 tcgataatat caagtatatc caatcaaccg ttgggctaga agctttacca gaacgactgc
     8881 gtgagattgc agcgcttcgt atagctaatg aagatgttac cttaaaagag ctaggcgaaa
     8941 tgctgacaac aggtcaagta agtaaatcag gtattaatca tcgtctccgg aaactagatc
     9001 agattgcaga gcgccttaga agtggggaaa caccagcaca agtaggactg aaaatcagta
     9061 atagttaatt aaaaagaaaa ggatgcgaat tagaatgtcc aaattatttt cagaatataa
     9121 attaaaagat gtaacgctaa aaaacagaat tgttatgtca ccaatgtgta tgtattcagt
     9181 agaaaataaa gacgggattg caacagactt tcattttgca cactatgtct cgagagctgc
     9241 tggtggtaca gggcttgtca tcttagaagc tacggctgtt caagaagtag gacggatttc
     9301 tgaatttgat ttaggactat ggaatgacga gcaagttcca gctttgaaaa aattagtaga
     9361 tggacttcat tatcacggag caaaagcagg aattcaatta gcacacgctg gaagaaaagc
     9421 tgttttacca ggtgaaatag tggctccttc tgctattgct tttgatgaaa aatcagacaa
     9481 accagtagag cttacgaaag aagcaattaa agaggttgtg gctgatttta aacgtgccgc
     9541 ttatcgtgca aaagaagcgg gatttgatgt tattgagatt catgctgctc atggttattt
     9601 aattcaccaa ttcttatcac caattacgaa tcgtcgcgaa gataattacg gtggacctgc
     9661 tggcaatcga tataaaattt taagtgatat tattaaagca gtgaaggaag tatgggacgg
     9721 cccgattatc gttcgagtat ccgctactga ctatgcacat ggcggtttgc aactagaaga
     9781 tcatattcct tttgcaaaat ggatgaaagc agatggcgtg gaactaattg atgtgagtac
     9841 aggtggttta gttaatgtgg ctccaccagt tttcccaggt tatcaagtgc cattcgcgga
     9901 tgaaatccgt cgcggggcgg gtattgcgac tggagcgctt gggcttatta cacgaggcga
     9961 acaagcggaa gaaattttat gcaatgaacg agcggattta attattgttg gtcgtgaatt
    10021 attacgaaat ccttattttg ctaaagatgc agccaaacaa ttaggcgaaa caattgaagg
    10081 accaaaacaa tattcacgcg cgtggaaata aataaaaagc tggaagttca gagtttttga
    10141 acttccagct tttttagtag aaattaatta atagttacat tccaatcata agagcatacg
    10201 cctccagtgg cataattgtg attatacgag atgtctaatt tatactcacc aggacttaga
    10261 gcggatgtat ccactgttat agagttgtcc tccgcattaa ctgtcgtcgg aagttggact
    10321 atattagtcc cgatatattc tcctgtaact tctgggctga ctaacatgtt aatttcttcc
    10381 atttggaaat aaataggtaa atcaatagta catgtattgc cctgattaat agtttgatca
    10441 ggaagctctc cattttgact ttgaacataa ata
//
LOCUS       DASDYO010000113        10231 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.113, whole genome shotgun sequence.
ACCESSION   DASDYO010000113 DASDYO010000000
VERSION     DASDYO010000113.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10231
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.113"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..531)
                     /gene="raiA"
                     /locus_tag="U0290_002361"
     CDS             complement(<1..531)
                     /gene="raiA"
                     /locus_tag="U0290_002361"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466034.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome-associated translation inhibitor RaiA"
                     /protein_id="HEM2302397.1"
                     /translation="MLKYNIRGENIEVTEPIRDYVEKKIDKLERYFTETPDANVHVNL
                     KVYSDKNAKVEVTIPLPNLVLRAEETSGDLYASIDLIVDKLERQIRKHKTKVNRKFRD
                     KGAERDYFAYSDVNGSTPPEENEGDFDLEIVRTKQFSLKPMDSEEAVLQMNLLGHSFY
                     VYTDAETNGTNIVYSRK"
     gene            complement(726..1382)
                     /locus_tag="U0290_002362"
     CDS             complement(726..1382)
                     /locus_tag="U0290_002362"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466035.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComF family protein"
                     /protein_id="HEM2302398.1"
                     /translation="MTNCLLCFQPVRQSASWEISWLFEPLPICCDACLAGFEKLTGLL
                     CKNCSKESLDDVCEDCRSRTHFLDSNKSIYRYNDFAKDYMKKFKFQGDYEIGAIFKKE
                     LRNFLSEKKEKIVPIPVSEMRKVERGFNQTTAILKQSGILYEELLAKKHTEKQSKKTK
                     RERLASEQTFYFSGKEIYESTEVILFDDIYTTGSTLNLAAQILKEAGVYKVSALTIFR
                     "
     gene            complement(1375..2694)
                     /locus_tag="U0290_002363"
     CDS             complement(1375..2694)
                     /locus_tag="U0290_002363"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase"
                     /protein_id="HEM2302399.1"
                     /translation="MDIFPGRLYQEREIESKEGLREVVAIESNKCFRCGNTDVQLFGK
                     MSCALCKREDCIYCRNCIVMGRVNSCQKLYYQHARLLLETKEVLLRWEGALSAGQRKA
                     SNAIVVNLKAKTDMLLWAVAGSGKTEMMFEGMDWALRQGFRICVASPRVDVCLELLPR
                     LKEAFPSIDIVCLYGDSKDNYQGEQFVIATTHQLIRFYEAFQVIFIDEVDAFPYAKDP
                     FLEYAVMKARTKEGSTIIITATPEKKWQEECVRGKRNFVKIPGRYHRKKLPVPRTCWI
                     GPWKKNLAKGKITPKLIQWMNDVKKKDQPALIFFPEIDAMNKFANALENKGYASPVTV
                     HSADELRKEKVEWLRKGKIKLLLTTTILERGVTFTDVQVAVFGSEARIFTEAALVQIS
                     GRAGRKLSHPTGDVCFFHYGKTIEMKQAISHIQKMNQQGVIEGMLDD"
     gene            complement(2890..3741)
                     /locus_tag="U0290_002364"
     CDS             complement(2890..3741)
                     /locus_tag="U0290_002364"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DegV family protein"
                     /protein_id="HEM2302400.1"
                     /translation="MNEKIAVVTDSTTYLPNEVKEQLRINVVPLSVIIDGKSYREGEE
                     LSAADFYRKVKEAENFPTSSQPAPGDFIHLFEQLKEQGFDTVISIHLSSGISGTFQNA
                     ASAGELIEGLNVVAYDSELSCMAQGMFVVKAAEMALANEPLDQIIQKLDKIKQAQDAY
                     FMVDDLNNLQRGGRLNGAQALVGSLLQIKPILHFNDKQIVLFEKVRTQKKALKRIEDI
                     LQKAVQNKTAEKAYVIHGNDLAKGEAWLAQLEAKFPEVTFELSYFGPVIGTHLGEGAL
                     GLTWSIK"
     gene            complement(3762..4448)
                     /gene="degU"
                     /locus_tag="U0290_002365"
     CDS             complement(3762..4448)
                     /gene="degU"
                     /locus_tag="U0290_002365"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466038.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="two-component system response regulator DegU"
                     /protein_id="HEM2302401.1"
                     /translation="MALKIMIVDDHQLFREGIKRILELEDSFEVVAEAENGKNIVAKV
                     REYKPDIVLMDINMPTVNGLDATEMLVRQFPSIKVIVLTIHDTDEYVTEALRAGAVGY
                     LLKEMDAHELVEAVKIVDNGGAYIHPRVAIKLIREYRHLASTNTSQGVYGYQQPEVKM
                     PLHILTHRECEVLQLLTDGKSNRGIGETLFISEKTVKNHVSSILQKMKVNDRTQAVVT
                     AIKHGWVYIR"
     gene            4833..5468
                     /locus_tag="U0290_002366"
     CDS             4833..5468
                     /locus_tag="U0290_002366"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466039.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YigZ family protein"
                     /protein_id="HEM2302402.1"
                     /translation="MLDHYLTIHSDGKHEIIIEKSRFICHIKRATTETEAQTFIQEIK
                     KEHRDATHNCSAYIIGENDQYQKAHDDGEPSGTAGVPMLEVLKKKSLKNVAVVVTRYF
                     GGTKLGAGGLVRAYGNAVSEAIQAIGIVECKLATIVECSFAYPLLGKIENALELKAYQ
                     IDKKEFTEKVVLHIFVDNDELQDFFNWITEISNGQLEYKEGPQKYREKDVT"
     gene            5470..6015
                     /locus_tag="U0290_002367"
     CDS             5470..6015
                     /locus_tag="U0290_002367"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003742943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302403.1"
                     /translation="MSTNVFIQLPDTILTKRTILKKTSIADATTLFDIWSDDEVAQFM
                     NIEKFSTILQAEEMIQAIENEPNACRYTIFTTDDSLHAIGSLGINDINKTNQTIEIGY
                     ELAKSHWRQGFMFEILTTFLTTVKPYLPYKVLTAKVLPDNVASIKLLKKLGFELTTTG
                     QELDLHSGRICEISNYRMLLK"
     gene            6191..7249
                     /locus_tag="U0290_002368"
     CDS             6191..7249
                     /locus_tag="U0290_002368"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466041.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM2302404.1"
                     /translation="MSKGTDDSRRSSKKYKRRRKILFWILIPVMCLVLAGVGYGTYLF
                     SKTKLAADNSYDNVRNGKASTLRTNDIEPIKDSFSILIIGVDTSSTRAENGNPRSDSL
                     ILATFNVKDSRIEMTSIPRDSYVHIEDSAKDIDKYTKINAAHAYGGPELTMKTVEEEF
                     KIPIDYYVRFDFDAFLKIVDALDGIDVDVPVDFTEQDSKDNAGAITLKKGPQHLNAEQ
                     ALALARTRHIDSDIERGKRQQLIIKSIVSEATSISSVSKYSDIIEVVGDNMKTNLTFN
                     QMLSIAKYGMTNKIDIKSLNLKGDSNPMDGIYYYKLDESSVQSISNEFADELGIKQPF
                     PGAAPYSDESSNTTSTSN"
     gene            complement(7287..8339)
                     /locus_tag="U0290_002369"
     CDS             complement(7287..8339)
                     /locus_tag="U0290_002369"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466042.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HEM2302405.1"
                     /translation="MLIWSILISFAVGIIMVPIIRKFAFRINAVDTPRERHKHTKTTA
                     TLGGLAIFISFSVGMILAPIDKSGFLPIYFGALIIITTGFIDDIFDLSPKWKMLGQIL
                     AALCVTVWGDITINFINVPFYGQVDFGYFAIPLSIIWIVAIVNALNLIDGLDGLAGGI
                     SIIALMTIAGMALLLKDVFVAPVALILVAAVAAFLIYNFPPASIFMGDTGALFLGYMI
                     AVLSLMGFKNVTFISLLVPLIILGVPLSDTFFAIVRRLKERIPISSADRSHIHHRLMA
                     LGFTEKQTVLLIYCMALLFSMTGFVFSFSTTWGAMLLLLLLIFSIEIIVEFIGLIGED
                     YRPILNLLQKIHRKRK"
     gene            complement(8347..9471)
                     /gene="menC"
                     /locus_tag="U0290_002370"
     CDS             complement(8347..9471)
                     /gene="menC"
                     /locus_tag="U0290_002370"
                     /EC_number="4.2.1.113"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466043.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="o-succinylbenzoate synthase"
                     /protein_id="HEM2302406.1"
                     /translation="MYFQEARLIHAELPLIAPFKTSYGELNSKDFYIIELVNEEGIRG
                     YGELEAFPLPDYTEETLGTAISIIKQHLLPILAQKEIRTPEEVNQMFSWIQGNEMAKA
                     AVELAVWDAFAKNEKLSLAKMIGAKKDSITVGVSIGVQHSAEALVQLVSQYMDEGYER
                     VKLKIAPKKDIQFVKAVREKFPNLSLMADANSAYNREDFLLLKELDHFNLEMIEQPFG
                     TKDFVEHAWLQKKLKTRICLDENIRSLDDLKQAHMLGSCQAVNLKLARVGGMSEALKI
                     ARYCSDNNLLVWCGGMLEAGIGRAHNIALAARAEFTFPGDISASNRYFNEDIVSPAFV
                     LNQGKLTVPTGQGVGVALDLDVLQKYTKSTERILLNKGWS"
     gene            complement(9472..10206)
                     /locus_tag="U0290_002371"
     CDS             complement(9472..10206)
                     /locus_tag="U0290_002371"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466044.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WecB/TagA/CpsF family glycosyltransferase"
                     /protein_id="HEM2302407.1"
                     /translation="MKKKEISILNIPFYNTTQAGFVEELYMAAKNGERRFVVTANPEI
                     VMHARTDKEFEAILGQADYIVPDGIGIIMASEKLGEPLKERVTGYDTMVGLLNKPLSC
                     YFLGAKPEISEVVEAKVREKFPQAVVCGVHHGYFDVLESEAIAKEILVAQPDVIFVAL
                     GSPAQEKWILSQIANFTKGIFIGVGGSFDVLTDSVKRAPKIWIKLRLEWVYRLLSNPS
                     RWRRFFAIPQFMLVIRKERKRLKKGE"
BASE COUNT         3240 a         2158 c         1556 g         3277 t
ORIGIN      
        1 tttacgagaa taaacaatat tggtaccgtt tgtttccgca tcagtgtaaa catagaaact
       61 atgacccagc aaattcattt gtaaaacagc ttcttcacta tccatcggtt ttaatgaaaa
      121 ttgttttgtt cttacaattt caagatcaaa atctccttca ttttcttctg gtggggtgct
      181 gccgttaaca tcagaataag caaaataatc tctttctgcc cctttgtcac ggaacttgcg
      241 gtttactttt gttttatgtt tgcgaatttg tctttctaat ttatctacaa ttaagtcgat
      301 gctagcatat aaatctccac ttgtttcttc tgcacgtagc acaagatttg ggagcggaat
      361 ggtcacttca actttcgcat ttttatcgga atatactttt aaattaacat gaacgttagc
      421 gtctggagtc tccgtaaaat atcgttctaa tttatcgatt ttcttttcaa cataatctcg
      481 gatcggttct gttacttcaa tattttctcc acgaatgttg tacttaagca tagcaattcc
      541 tcctttgaaa taaaacaaaa taacgataaa gaagagtatt cttcttaccc ttagtctacg
      601 tgaaaacgat gtgttttgca aacatttgca caaagagcta agaagcttac attcacttat
      661 ctttatttag tattttattc cactaatacc gcttccgcaa acctctttta gaagataaat
      721 atcatctatc tgaatatcgt tagcgcactc accttgtaca ctccggcttc ttttaagatt
      781 tgcgctgcta ggttaagtgt gcttcctgtg gtgtaaatat catcaaataa tattacttct
      841 gttgactcat aaatttcttt tccagaaaag taaaatgttt gttcagatgc taatcgttcc
      901 ctctttgttt ttttagattg cttttctgta tgctttttgg ctaaaagctc ttcatatagg
      961 atgccagatt gttttaatat cgcggttgtt tgattaaatc cacgttctac tttccgcatc
     1021 tcgcttactg gaattggtac aatcttctct ttcttttctg atagaaagtt ccttaattcc
     1081 tttttgaaaa tagcccctat ttcataatcc ccttgaaatt taaacttctt catatagtct
     1141 ttggcgaaat cattgtaacg ataaatggat ttattactat ctaaaaaatg tgttctactt
     1201 cggcaatcct cgcagacatc atctaaggat tctttactac aatttttaca tagtaagcca
     1261 gttagttttt caaatcccgc taagcatgca tcacaacaaa ttggcaaagg ttcaaataac
     1321 caacttattt cccaactggc gctttgccta actggctgaa aacaaagtaa gcaattagtc
     1381 atctagcatc ccttctatca ctccttgttg attcattttt tgaatgtggg agatagcttg
     1441 cttcatttct attgttttac cgtaatgaaa aaagcaaacg tctccagtcg gatgagataa
     1501 tttcctacct gcccttcctg aaatttgaac taaagcagct tccgtaaaaa tacgagcttc
     1561 acttccaaac accgctactt gcacatctgt aaaagtaaca cctctctcta aaattgtagt
     1621 tgttaataac agcttgattt tcccttttcg tagccattcc actttctctt tacgcaattc
     1681 atcggctgaa tgaactgtca ctgggctggc atagccttta ttttcaagtg catttgcaaa
     1741 tttattcata gcatcaattt ctggaaagaa aattaaagcc ggctgatctt tcttcttcac
     1801 atcattcatc cactggataa gcttaggagt tattttccct ttagctagat tctttttcca
     1861 cgggccaatc cagcacgttc tcggcacagg cagtttcttt cggtgatatc gtccgggaat
     1921 tttcacaaaa ttacgttttc ctcttacaca ctcttcttgc cactttttct ctggggttgc
     1981 tgtgattatt attgttgaac cttcttttgt tctggctttc ataacggcat attctaaaaa
     2041 aggatctttc gcataaggaa atgcatctac ttcatcaata aaaataactt gaaacgcttc
     2101 ataaaagcga ataagctgat gggtcgtcgc tatcacgaac tgctctcctt ggtagttatc
     2161 ttttgagtct ccatatagac aaacaatatc tatgctaggg aaagcttctt ttaaacgtgg
     2221 aagaagctct aaacaaacat ccactctcgg agaagcaaca caaattctaa aaccttgtcg
     2281 caaagcccag tccattcctt caaacatcat ctccgttttt ccagatccgg caactgccca
     2341 tagcaacata tccgtttttg cttttaaatt aacgactatc gcgttggatg cttttcgctg
     2401 tcccgctgac aaagctcctt cccacctcaa taatacttcc tttgtctcta gtaataacct
     2461 agcatgttga tagtataatt tttggcaact atttactcgt cccatcacaa tgcaatttct
     2521 gcaataaata caatcctctc tcttacataa tgcacaggac attttgccaa ataactgcac
     2581 atccgtattt ccacatcgaa agcatttgtt tgattctatt gctactactt ctcttaagcc
     2641 ctctttactc tctatttcac gttcttgata aagccttccc gggaagatgt ccatctgtat
     2701 tcacctcccc ttagttatac actttttctt tttttattgc agaaacgaaa tccttgtttt
     2761 cgaccgcata cttataaaca aaacaagtat ttcttttaga cgaaaacgag tatttttgcc
     2821 atccaaaact actgaaaaaa caaatttagt ctccatgaaa aaaatctcca gcttttagct
     2881 ggagattttt tattttattg accaagttaa gccaagcgca ccttcaccca agtgagttcc
     2941 aatgactgga ccaaaataac ttaattcaaa tgttacttct gggaatttcg cttctagttg
     3001 tgcaagccat gcttcaccct tcgctagatc attgccatga atgacataag ctttttctgc
     3061 cgttttgttt tgaacggctt tttgaagaat atcttcaatt cgtttcaatg cctttttttg
     3121 cgttctaacc ttttcaaaga ggacaatttg tttatcatta aaatgaagaa tcggtttaat
     3181 ttgaagcaag ctaccaacaa gggcttgtgc tccattcaaa cggccgccac gctgtaaatt
     3241 atttaaatca tctaccataa aataagcatc ttgtgcctgt tttattttat ctagtttttg
     3301 gataatctgg tccagcggct catttgccaa agccatttca gctgctttaa ctacaaacat
     3361 tccttgcgcc atgcaagaaa gctcagaatc ataagcgacg acatttagcc cctcaattaa
     3421 ctctcctgct gaagccgcat tctgaaacgt tccactaata ccgcttgata gatgaatact
     3481 aattacagta tcaaaacctt gttctttcag ctgttcgaac aagtgaatga aatctcctgg
     3541 ggcaggttga gaggaagttg ggaaattctc agcttctttt acttttctgt aaaaatcagc
     3601 cgcagataac tcctcacctt cacgataaga ttttccgtca attattacag aaagtggcac
     3661 gacattaatt cgtagctgct ctttcacttc atttggcaaa taagttgtgc tgtcagtaac
     3721 cactgctatt ttttcgttca tatagtcccc ctgatatttc tttagcgaat atatacccag
     3781 ccgtgcttga ttgccgttac caccgcttga gtcctatcat tcactttcat tttttgtaaa
     3841 atactactta catggttttt tactgttttt tcactaatga aaagtgtctc cccaattccg
     3901 cggttacttt ttccatcggt aagaagttgc aatacctcgc actctctatg cgttaagatg
     3961 tgtagtggca ttttgacttc aggttgttgg tagccataaa caccttgaga agtgttagtg
     4021 cttgctaaat ggcggtattc acgaattaat ttaatcgcta cacgtggatg aatatacgcg
     4081 cctccattat caacaatttt tacagcttct acaagttcat gggcatccat ttcttttaat
     4141 aaataaccga ctgctccagc tctaagcgct tctgttacat attcatctgt atcatgaata
     4201 gtcaagacga ttactttgat gctaggaaat tgacgtacta gcatttcagt tgcatctagt
     4261 ccgttgacag ttggcatatt aatatccatt aaaacaatat ctggtttata ttcgcgaact
     4321 tttgctacga tatttttacc attttcagct tccgctacga cctcaaaaga atcttccaac
     4381 tctaaaattc gcttgatacc ttcgcgaaac aactgatgat catctacaat catgattttg
     4441 agtgccataa tgactactcc tccttcactt atctaatttc accaagcctc tttgcaatcg
     4501 aaaacatcat cctttttaag tagcaaaacc gcttaacctt ataatccctg ccataaaatt
     4561 ggcaattaaa catttctctt ttaagtacta tttactcaaa cttacctatt ttcaacacaa
     4621 actatacctt gattatactg catagcccaa gaaaattact cctatatgcc tataaaatgt
     4681 aattgaaaac cagtctaaag taatagtagt ttttattata acacgaattt gccgtcactt
     4741 cacccactgc acttagaaaa atatctatac aatcgctttg ctttcggata aaataaaagc
     4801 aggctaaatg catcaactta tggaggttcc ttatgttgga tcattattta accatccata
     4861 gcgatggaaa acacgaaata attattgaaa agtcccgctt tatctgccac attaagcgag
     4921 ctacaacaga aactgaagca caaaccttta ttcaagaaat caaaaaagag catcgtgatg
     4981 ctacccataa ttgttctgct tatattatag gagaaaatga ccaatatcaa aaagcgcatg
     5041 acgacggaga accaagtgga acagctggcg ttccaatgct agaggtctta aaaaagaagt
     5101 ctttaaaaaa tgttgctgtt gtagttactc gttattttgg aggaacaaaa ctaggtgcag
     5161 gcggcttagt ccgcgcatat ggtaatgctg ttagtgaagc tattcaagca atcggtattg
     5221 tcgaatgcaa actagccact attgttgaat gctcttttgc ttatccactt ttaggaaaaa
     5281 tcgaaaatgc gcttgaacta aaagcatatc aaatcgacaa aaaagagttc actgaaaaag
     5341 tagtacttca tatttttgtt gataacgacg aactgcaaga ttttttcaac tggatcactg
     5401 agatttcaaa tggacaactt gaatataaag aaggaccaca aaaatataga gaaaaggatg
     5461 tcacttagta tgtccacaaa cgtatttatc caattaccag atactattct tactaaacga
     5521 actatattaa aaaaaacctc tattgcagat gctactacat tatttgatat ttggtctgat
     5581 gatgaggtag ctcagtttat gaacatcgaa aaattctcta ctattcttca agcagaagaa
     5641 atgattcaag caattgaaaa tgaaccaaat gcttgcagat acaccatttt cacaactgat
     5701 gattctttac atgcaattgg ttcgcttgga attaatgata ttaacaaaac gaaccagaca
     5761 atcgaaattg gctatgaact agcaaaaagt cattggcgcc aaggttttat gtttgaaatt
     5821 ttgacaacat ttttaaccac tgtaaagccc tatcttccct ataaagtgct tacagcaaaa
     5881 gttctaccag ataatgtagc ttcaatcaaa ctactgaaaa agcttggttt tgagcttacc
     5941 acaactgggc aagaactaga tttacattct ggtaggattt gtgaaatcag taattatcga
     6001 atgctactga aataggacaa atattacatt tttgaaagat atcatctttt ttgtattttt
     6061 tttcgagtaa tttctgtata ataacatcaa agtttaaaaa ttaaagaaac cgtaaatcgg
     6121 gcgtaacatt ctttaatgca acaaatgata caataaaact tagaaaagtg actataagga
     6181 gaattaatat atgagtaaag gcactgatga tagccgaaga agcagcaaga aatacaaacg
     6241 tagaagaaaa attttattct ggattctaat tcctgtaatg tgcttagtac ttgcaggtgt
     6301 cggatacggc acttatcttt ttagtaaaac aaaactcgca gcagataact cttatgataa
     6361 tgtaaggaac ggaaaagcct ctacacttcg aacaaatgac attgaaccta taaaagatag
     6421 tttttctatt ttaattattg gtgttgatac cagctctaca cgggccgaaa atggtaaccc
     6481 tcgaagcgat tcactaatct tagcaacatt taatgtcaaa gattcacgca tagagatgac
     6541 tagtattccg cgtgattctt atgttcatat tgaagattcc gccaaagaca ttgataaata
     6601 cacgaaaatt aacgcagctc atgcttacgg tggtccagaa cttacaatga aaaccgtaga
     6661 agaagaattt aagattccaa ttgattatta tgttcgtttt gactttgatg cattcttaaa
     6721 aattgtggat gctttagacg gaattgatgt agatgttcca gtggacttca ctgagcaaga
     6781 ttctaaagac aacgccggtg caatcactct aaaaaaaggt cctcaacacc ttaacgctga
     6841 gcaagcttta gcactagctc gtacacgaca catcgatagt gatatcgaac gtggcaaacg
     6901 tcaacaacta atcattaaat ctattgtaag cgaagcaaca tccatttctt ctgtaagcaa
     6961 atattccgat atcattgaag ttgttggaga taacatgaaa accaacttaa ctttcaatca
     7021 aatgctttct atcgcaaaat atggaatgac aaataaaatt gatattaaat cccttaactt
     7081 aaaaggggat agcaacccaa tggacggtat ttattactac aaacttgatg aaagctctgt
     7141 gcaaagtatt tcgaatgaat ttgctgatga acttggaatt aaacaaccat tccctggtgc
     7201 agcaccgtat tcagacgaaa gttctaacac aactagcact tctaattaaa aaaagaccaa
     7261 caactaataa atagttgttg gtctttttat tttcgttttc gatgtatttt ttgaagtaaa
     7321 tttaagattg gtcggtaatc ctcaccaatt aacccaataa attcaacaat aatctcaata
     7381 ctaaaaatta ataataacag taataacatt gctccccaag tagtggaaaa cgaaaatacg
     7441 aagcccgtca tagagaatag taatgccata cagtagatta gtaacaccgt ctgtttctct
     7501 gtaaatccta gcgccatcag cctatggtga atatgagatc tatccgctga agatatcggt
     7561 atccgctctt ttagtcttct tacaatagca aaaaaagtat ctgacaaagg tacacctaaa
     7621 ataataagtg gtactaacaa tgagatgaaa gtaacgtttt taaaacccat aagtgataaa
     7681 acagcaatca tataaccaag gaataacgct ccagtgtctc ccataaaaat actagcaggc
     7741 gggaaattat aaatcaagaa agccgcaact gctgctacaa gaattaacgc aaccggcgca
     7801 acaaaaacat ctttcaaaag caaagccata cctgcaatgg tcattaaagc aataatagaa
     7861 ataccaccag cgagaccatc taatccatca attaagttta acgcattcac aattgcaaca
     7921 atccaaataa tcgataatgg aatcgcaaaa tacccaaaat ctacttgtcc gtagaatggg
     7981 acgttaataa agttaatagt aatgtctccc cagacagtta cgcaaagagc agctaaaatc
     8041 tgtcctaaca ttttccattt tggtgataaa tcaaatatat catctataaa gcctgtcgta
     8101 ataataatta atgctccgaa ataaattggc aagaaacctg atttatctat tggggctaag
     8161 atcatcccta ccgaaaaact tataaaaata gctaatccac ctaaagtggc tgtagttttt
     8221 gtatgtttgt gtctttcacg cggtgtatca accgcattaa ttcggaaagc aaacttccta
     8281 attatcggca ccataatgat accaactgca aagctaatca atatactcca tattagcaat
     8341 attttttcag ctccatcctt tatttagcaa aattctttct gttgatttag tatatttttg
     8401 tagcacatct aaatctaaag caactccaac cccttgacca gttggcacag tgagttttcc
     8461 ttgatttaat acaaatgctg gcgaaacaat atcttcatta aaataacgat ttgatgcaga
     8521 aatatctcct gggaaagtaa attccgctct agcagcaagt gcaatattgt gagccctacc
     8581 tataccagct tcaagcatgc cgccacacca gacaagcaaa ttattatcgc tacaatacct
     8641 cgctatctta agagcctctg acataccacc aacgcgcgct aattttaaat taactgcctg
     8701 acaacttcct aacatatgag cctgtttcaa atcatctaat gacctaatat tctcgtccaa
     8761 acaaatacgc gtttttaatt ttttttgcaa ccaagcatgc tccacaaaat ccttagttcc
     8821 aaatggttgc tcaatcattt ctaaattaaa gtgatctaat tcttttaaca acaagaaatc
     8881 ttctctatta tacgctgaat tcgcatcagc catcaagctt agattaggaa atttttctcg
     8941 aacagcttta acaaattgaa tatctttctt aggtgcgatt ttcaacttca ctctttcgta
     9001 gccttcatcc atatattgac taactaactg gactaacgct tccgcactat gctgcacacc
     9061 aatgctcacg ccaaccgtaa tcgagtcctt ctttgcgcca atcattttag ctaatgagag
     9121 cttctcattt tttgcaaaag catcccaaac agcaagctcc acagccgctt tcgccatttc
     9181 atttccttga atccagctaa acatctggtt aacctcttca ggagttcgta tttctttctg
     9241 cgcaaggatt ggcaacaaat gctgtttaat aatagaaata gcagtgccca aagtctcttc
     9301 tgtatagtca ggtaacggaa aagcttccaa ctctccataa ccacgtatac cctcctcatt
     9361 cactaactca ataatataaa aatctttact gtttagctca ccataacttg ttttaaatgg
     9421 tgcaataaga ggaagttctg catgaattag tctcgcttct tgaaaataca tttactcacc
     9481 ctttttcaaa cgcttgcgct cttttctaat aacaagcata aattgaggta ttgcaaaaaa
     9541 acgtctccat cttgaaggat tagaaaggag cctgtatacc cattctaacc ttaattttat
     9601 ccatattttt ggcgcgcgct ttacactatc tgttaagaca tcaaaacttc cacctacacc
     9661 aataaaaatg cctttagtaa aattagcaat ctgagacaaa atccattttt cttgagcagg
     9721 tgaacctaga gcgacaaaaa tcacatctgg ttgtgctacg agtatttcct tagcaattgc
     9781 ttcactttct aatacatcaa agtaaccatg atgaacacca caaacaactg cctgtggaaa
     9841 tttttcccgc actttggcct ctacaacctc actaatttcc ggttttgctc ctaaaaaata
     9901 acaacttagt ggcttattta atagaccaac catcgtgtca taaccagtaa cccgttcctt
     9961 taaaggctct ccaagttttt ctgaagccat tataatccca ataccatcgg gtacaatata
    10021 atcagcttgc cctaatattg cttcgaactc cttatcagta cgagcatgca taacaatttc
    10081 tggattagcc gttacaacaa accgacgctc cccgttcttc gcggccatgt atagctcctc
    10141 cacaaatcct gcttgcgtcg tattatagaa aggtatattt aaaattgaaa tttccttctt
    10201 tttcatatgt atctcctaaa aaactttatt a
//
LOCUS       DASDYO010000114        10172 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.114, whole genome shotgun sequence.
ACCESSION   DASDYO010000114 DASDYO010000000
VERSION     DASDYO010000114.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10172
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.114"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(13..924)
                     /locus_tag="U0290_002372"
     CDS             complement(13..924)
                     /locus_tag="U0290_002372"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464511.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302408.1"
                     /translation="MIKLINVVKKFGKIEAVKGINLEVEKGSLFAFLGENGAGKSTTL
                     SMICTESEPTSGEIFIDDEKLTFKNRKLFRQKLGVVFQENVLDDLLTVRENLYNRASL
                     YGKTKAEITERLALVSSIMGIEDILNRRFEKLSGGQKRRAEIARAIMHDPEILLLDEP
                     TTGLDPKTRVSVWKIIDYLREELGMTVFLTTHYLEEAKDADQLAVIHKGKIIAQGTPA
                     NIRSRFSVDKIFFYDAKVAELQKIMKKMNLPFKVTNRTMRVDVIDENVEILAILNQAI
                     GFYDSFEVIKGNLDDAFISMIKEDSND"
     gene            complement(921..1349)
                     /locus_tag="U0290_002373"
     CDS             complement(921..1349)
                     /locus_tag="U0290_002373"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3021 family protein"
                     /protein_id="HEM2302409.1"
                     /translation="MSTKLIQFIQSACLIFSASIITMICSYIATGESETVAIRDIFIM
                     LGFSIVTTFIQQLLFNNSVKTKRAFYSRLFAFFLFIGAAILGLGWLLDWYHNIAGFMI
                     ILGFICVTFLVMHIFFSFRDVKFSNEINQKLAEMRERETK"
     gene            complement(1346..1801)
                     /locus_tag="U0290_002374"
     CDS             complement(1346..1801)
                     /locus_tag="U0290_002374"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464509.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LytTR family transcriptional regulator
                     DNA-binding domain-containing protein"
                     /protein_id="HEM2302410.1"
                     /translation="MKFHVKQNNNLAVGEVDVYCHPDNLEEVTNMVIGIEESAEKISV
                     KKDGATYLLEPKAILYFEAVESKIFVYTEKEIYEIHWKLYELEEKFKESSFFRCSKSM
                     ILNIEWIEKIAPGFNGKFEAKLLNREKVIISRQYAKVLKQKLNMGGKRK"
     gene            complement(1934..2413)
                     /locus_tag="U0290_002375"
     CDS             complement(1934..2413)
                     /locus_tag="U0290_002375"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464508.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione peroxidase"
                     /protein_id="HEM2302411.1"
                     /translation="MNVHDFSEKAMNGKEIALSDYKGKVLLIVNTASKCGLTPQLEGL
                     EAMYKKLGGANFEILGFPCNQFLRQDPGSDEEILEFCQMNYGVTFQMFSKIKVKGKDA
                     SPLYKYLTEQTGGKKVEWNFAKFLIDENGEVVERFPSKMKPADFEDKVEALVAKVNN"
     gene            complement(2426..3478)
                     /locus_tag="U0290_002376"
     CDS             complement(2426..3478)
                     /locus_tag="U0290_002376"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464507.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HEM2302412.1"
                     /translation="MSYEPNTKETMQKIKELTSIPSPTGNTGKIIEKLAKDLDASKIP
                     YHLNNKGGLIVTLPGKDDTKHRMLTAHVDTLGAMVKEIKADGRLLLTLIGGYRFNAIE
                     GEYCTIETSDGDLYSGTILMHQTSVHVYKDAGTAERNDKNMEVRLDVKALDADKVRAL
                     GIEVGDFVSFDPRVQIINDEYIKSRHLDDKASVAILLQLINHIHENKLELPHTTHFLI
                     SNNEEIGYGGNSNIPSETVEYLAVDMGALGDGQTSDEYTVSICAKDGSGPYHLGLRKH
                     LVELAKSNNIDYKVDIYPFYASDASAAINAGNDIVHGLIGPGIDASHAYERTHRDSLY
                     HTEKLVYAYLFSNILK"
     gene            3619..5094
                     /locus_tag="U0290_002377"
     CDS             3619..5094
                     /locus_tag="U0290_002377"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464506.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2302413.1"
                     /translation="MEQTKVKAVTIAVFVATFMAAIEGTIVSTAMPTIVSQLDGIELM
                     NWIFSVYLLTSAVTVPIYGKLSDLYGRKNIFVIATIIFIIGSSLCGFAQNMEQLIIFR
                     AIQGIGAGGILPSTMTIIADVYPFEKRAKVLGFMGSAWGIAGVFGPLVGGFLVDQLSW
                     HWIFFINVPIGILTILLILLYLREKVEHVKLPIDYLGASLFTVALLGLLFALQRAGES
                     LNWIEPLVVILFAVSIVLFIAFYFVEKRAKDPIMPFVLFKNPVVLIGNLIGFLISAFL
                     IGINVYIPMWAQGMLGHGATIAGFMLAPLSVTWIIGSFIGGKLLMTLGNRHTVGIGVL
                     ITAASGLILALFPASTNDIFFYLNSAFMGFGFGIIFTTTTVTVQDAVPRFQTGIATAS
                     NTLFRTVGQTIGVAVFGTIFNSVLTSEFRDAAGSEVNRSNLNQLISPQTSGNVSADLV
                     DPLRDILYSGLHMVFWVMFACCIVSYFIHFILPKKHISGEK"
     gene            complement(5128..5880)
                     /gene="lieB"
                     /locus_tag="U0290_002378"
     CDS             complement(5128..5880)
                     /gene="lieB"
                     /locus_tag="U0290_002378"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464505.1"
                     /note="ABC transporter involved in aurantimycin A
                     resistance; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux ABC transporter permease LieB"
                     /protein_id="HEM2302414.1"
                     /translation="MKAIRDTSILFGRSMRHIMRSPDTIITVAIIPIMIMLMFVYVLG
                     GAIQTGTDNYVDYLLPGIILMAIASGIAYTAVRLFTDVQKGLFQRFHSMPISRSSVLW
                     GHVLTSLVSNVISIVLIILVALLIGFRSSAGIVEWLSVAGILLLFTLALTWVAVIPGL
                     TAKSVDGASAFSYPLIFLPFISSAFVPTDTMPTAVRVFAENQPVTSIVNTIRGLLYSE
                     PIGNDIWIALAWCVGITVVAYVFAITIYKKMV"
     gene            complement(5877..6641)
                     /gene="lieA"
                     /locus_tag="U0290_002379"
     CDS             complement(5877..6641)
                     /gene="lieA"
                     /locus_tag="U0290_002379"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464504.1"
                     /note="ABC transporter involved in aurantimycin A
                     resistance; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug efflux ABC transporter ATP-binding
                     protein LieA"
                     /protein_id="HEM2302415.1"
                     /translation="MKEVMIKATGLEKSFKKTEVLKGVDFEVKHGEIFALLGSNGAGK
                     TTTIQILATLLKADNGLATVSSFDVKTEPEKVRKHISLTGQFAAVDGLLTGRENILLI
                     AKLRGEKNPAQTADDLLARFGLEKAADRRADTYSGGMTRRLDIAMSLVGSPDVIFLDE
                     PTTGLDPEGRMEVWKTIKTLSDGGTTILLTTQYLDEAEQLADRIAILHGGTIIANGTL
                     DELKKLFPPAEVEYIEKQPSLEEIFLAIINGKEEVK"
     gene            complement(6839..7858)
                     /locus_tag="U0290_002380"
     CDS             complement(6839..7858)
                     /locus_tag="U0290_002380"
                     /EC_number="2.6.1.42"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464503.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="branched-chain amino acid aminotransferase"
                     /protein_id="HEM2302416.1"
                     /translation="MSKDIDWSNLGFSYIKTDKRYISYWKDGEWDEGTLTEDNTLHIS
                     EGSTALHYGQQCFEGLKAYRCKDGSINLFRPDRNAARIQKSCERLLMPHIPTEKFIDA
                     VMQVVRANEEFVPPYGTGATLYLRPFVIGVGDNIGVHAAPEYIFSVFCSPVGPYFKGG
                     MAPTNFIVSDFDRAAPNGTGAAKVGGNYAASLLPGQAAKERNFGDCIYLDPATHTKIE
                     EVGSANFFGITKDDKFVTPYSPSILPSITKYSLLYLAEHRLGLEALEGDVYIDKLDEF
                     KEAGACGTAAVITPIGGIQTKDDFHVFHSETEVGPVTKRLFDELCGIQFGDVEAPEGW
                     IYKVK"
     gene            8077..8826
                     /locus_tag="U0290_002381"
     CDS             8077..8826
                     /locus_tag="U0290_002381"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464502.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="esterase family protein"
                     /protein_id="HEM2302417.1"
                     /translation="MTAHKMLDEKFYSKSLGEELDLIICLPPDFSPLYKYPLFIVQDG
                     KDYFQFGKLARHSEELALNEQIQKAIFIGIPYKTVMDRREKYHPDGKQNDAYIRFLAF
                     ELVPYLEERFPSFQMPTSRFLMGDSLGASVSLKAALLFPFTFGNVILHSPYVDDTILT
                     LAEKVDPSKVKIFHIIGDRETAVETSGNEVLDFLSPNKSLEQILTTRGFDYYFHVFNG
                     DHRWKYWQPFIKDSLQFMLPVNTFDLESMRA"
     gene            8844..9272
                     /locus_tag="U0290_002382"
     CDS             8844..9272
                     /locus_tag="U0290_002382"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726192.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302418.1"
                     /translation="MTVKKVTDDIGKQAALKIRNDVFVVEQHVDPALEWDEFDEIDSV
                     VMFVDYAEDGTPLATGRFREKDGYGKVERICTQKIARGTGSGRRIMEAIESEAKSRGL
                     TTLKLGAQVTAIPFYEKLGYETCSGLFLDAGIEHKEMKKH"
     gene            complement(9322..9996)
                     /gene="rpiA"
                     /locus_tag="U0290_002383"
     CDS             complement(9322..9996)
                     /gene="rpiA"
                     /locus_tag="U0290_002383"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-5-phosphate isomerase RpiA"
                     /protein_id="HEM2302419.1"
                     /translation="MINQKKIAGEKACEWIKDGMVVGLGTGSTVYYTIEKLGEMVNNG
                     LHITGVATSEETSKQAQNLGIPLKSLNDVAEIDITIDGADEIDTDFQGIKGGGGALLR
                     EKMVASASLKNIWVVSEEKLVRNLGKFPLPIEVIPFGWKQIERTLEKEHVQTILRRQS
                     SGEIYVTNNGNYILDIVNQTFRDAEMWQEKLAQIPGIVEHGLFLHYVDIIVCAKANGE
                     IELIKK"
BASE COUNT         3063 a         2089 c         1658 g         3362 t
ORIGIN      
        1 tttaaattac gactaatcat tggagtcctc cttaatcatc gaaataaaag cgtcatctaa
       61 gttcccttta atcacctcaa aagagtcgta aaatcctata gcctgattta aaatagccaa
      121 tatttcgaca ttttcatcta tgacatctac acgcatcgtt ctgttagtca ctttaaatgg
      181 taaattcatt tttttcatta ttttttgaag ttctgcaact tttgcatcgt aaaagaaaat
      241 tttgtctaca gaaaaacgac ttctaatgtt tgctggtgtc ccttgcgcga tgattttccc
      301 cttatggatt acagccaact gatccgcatc tttggcttct tctaaataat gtgtcgttaa
      361 aaacaccgtc attcctaatt cttctcgcaa ataatcaata attttccata cactcactct
      421 agtttttggg tccagtccgg tcgttggctc atctagcagc aaaatttctg ggtcatgcat
      481 aattgcccta gcaatttccg cgcgacgttt ttgaccacca gacaattttt caaaacgccg
      541 atttaaaata tcctcaatgc ccataataga agaaactagc gctaatcgtt ccgtaatttc
      601 tgcttttgtt ttcccatata aactagcacg attatataaa ttttcgcgca ccgtgagtaa
      661 gtcatccaac acattttctt ggaaaacaac gcctagtttt tgtctaaata atttacggtt
      721 tttaaatgtc aatttttcat catcaatgaa aatttctccc gaagttggtt cgctttctgt
      781 gcaaatcatg ctaagcgtag tcgatttacc cgcaccattt tcgcctagaa aagcaaataa
      841 cgagcctttt tcaacttcta aattaatacc tttgacagcc tcgattttgc caaatttttt
      901 aactacattg atcaatttta tcattttgtc tccctttctc gcatttctgc tagtttttga
      961 ttaatttcat tactgaattt cacatcacgg aagctgaaga aaatatgcat tacaaggaaa
     1021 gtcacacaaa taaagcccaa aataatcata aacccagcta tgttatgata ccaatccagc
     1081 aaccaaccaa gccctaaaat tgctgcgcca ataaagagga agaaagcaaa caaacgactg
     1141 taaaaagcac gtttcgtttt cactgagtta ttaaataata attgctgtat gaatgttgtc
     1201 acaatactaa aacctagcat aataaaaata tcccggattg cgaccgtttc tgattctcca
     1261 gttgcgatgt aagagcagat catcgtgata atagaggcag aaaaaataag gcatgctgat
     1321 tgtataaatt gaattagttt tgtactcatt tccgcttacc tcccatgttt aatttttgct
     1381 ttaaaacctt cgcgtactgc cgagaaataa ttactttttc tcgatttaaa agtttcgctt
     1441 caaatttacc gttgaagcca ggggcaatct tttcaatcca ttcaatattt aagatcattg
     1501 atttcgaaca tctgaaaaaa gaactctcct tgaatttttc ttccagttca tataatttcc
     1561 aatggatttc ataaatttct ttttccgtat aaacaaaaat cttactttcg actgcctcaa
     1621 aatataaaat ggcttttggt tctagtaaat aagtggctcc atcctttttg actgagattt
     1681 tttcagctga ctcttctatt cctattacca tgttcgttac ttcttctaaa ttatcgggat
     1741 ggcaatacac atccacttca ccaactgcta aattattatt ttgcttcaca tggaatttca
     1801 tctggttgcc tcccttttta ttttattata aacgccatgt caaaaactac aagctgattt
     1861 cagtaacatg catttttaac taactaagat gcaaaaaact cggtagtact ataatagcac
     1921 taccgagttt tccttaatta tttactttcg caacaagtgc ttccacttta tcctcaaaat
     1981 ctgctggttt cattttagat gggaaacgtt caacaacttc tccattttca tcaattaaga
     2041 atttcgcaaa gttccattct acttttttac cacccgtttg ttcggttaaa tatttataaa
     2101 gtgggctggc atctttgcct tttactttaa ttttggaaaa catttggaaa gtcacaccat
     2161 aattcatttg gcaaaattct aaaatttcct catcactgcc aggatcttgt cgcaaaaact
     2221 ggttacacgg gaaaccgagg atttcaaaat tagcgccacc caatttttta tacattgctt
     2281 cgagaccttc taattggggt gttaagccac atttactcgc agtattcacg atgagtaata
     2341 ccttaccttt ataatcactt aaagctattt ctttgccatt cattgctttt tcagaaaaat
     2401 catggacatt catatgggat tcctcctatt tcaatatatt tgaaaataaa tatgcataaa
     2461 ctaatttttc tgtatggtaa agtgaatcgc ggtgtgtgcg ttcatatgca tggctagcat
     2521 caatacctgg tccaatcaaa ccatggacaa tatcattacc agcattaatt gccgcactcg
     2581 catcagatgc ataaaacgga taaatatcca ctttataatc aatattattg cttttagcaa
     2641 gctccactaa atgtttgcgc aaaccaaggt gatacgggcc actaccatct tttgcacaaa
     2701 tagaaacagt gtattcatca gacgtttgtc cgtcaccaag tgctcccatg tcgacagcta
     2761 aatattccac cgtttcagac ggaatgttag aattaccacc atagccaatt tcttcattat
     2821 tagagatgag gaaatgggtt gtatgaggaa gctccagttt attttcgtga atatgattga
     2881 ttagttgtaa taaaatcgcg acacttgctt tatcatccaa atggcgagat ttgatatatt
     2941 catcattaat aatttgcacg cgcggatcaa acgaaacaaa atcccctact tctattccaa
     3001 gcgcacgaac tttgtctgca tctaatgctt ttacatctaa gcgaacttcc atatttttgt
     3061 cattacgctc agcagtccca gcatctttat agacatggac agaagtttga tgcattaaaa
     3121 tggtgccact atacaaatct ccatcacttg tctcaatggt acaatattcg ccttcaatcg
     3181 cgttaaaacg gtagcctcca attaaggtta aaagtaatcg tccgtctgct ttaatttctt
     3241 tgaccattgc acccagcgta tccacatggg cggttagcat acggtgtttc gtgtcgtctt
     3301 tcccaggaag cgttacgatt aatccacctt tgttgtttaa atggtaaggg atttttgaag
     3361 catctaaatc ttttgccagt ttttcgatga ttttccctgt attgccagtt gggcttggga
     3421 tagatgttaa ttctttaatt ttttgcattg tttcttttgt atttggttcg tatgacaaaa
     3481 aaattcctcc tttagttcgc tttcttctat tatattatag cgcttatctt gaatatgcgc
     3541 atttcttagg attaactttt ttcccaattt agtcctttta tatgctataa ttcggtagac
     3601 gaaaagggag ggaatttttt ggaacaaaca aaagtaaaag ccgttaccat cgccgtattt
     3661 gtcgcaacat ttatggcagc tattgaaggt accatcgtga gtactgcgat gccaacgatt
     3721 gtaagtcagt tggacggcat agagttaatg aactggattt tttctgttta tttgctaaca
     3781 tcagcagtga cggttccgat ttacggaaaa ctgtctgatt tgtatggacg aaaaaatatt
     3841 tttgtgattg cgacaattat ttttattatt ggttcatcac tttgtggatt tgcacaaaat
     3901 atggaacaat taattatttt tcgcgcgatc caaggtattg gagcaggtgg gattttacca
     3961 tctactatga cgattatcgc agacgtgtat ccatttgaaa aacgagcaaa agtacttggc
     4021 ttcatgggtt ccgcttgggg tatcgctggc gtatttggac cacttgttgg agggttttta
     4081 gtagatcaac tttcatggca ttggattttc tttatcaatg tccctatcgg cattttaaca
     4141 atcctactta ttttgcttta tttacgcgaa aaagtggagc atgtcaaact accaattgac
     4201 tatttaggtg cctcgctctt tacggttgct ctgcttggat tattatttgc gttacagcga
     4261 gccggggaat cactcaactg gatagaaccg ctcgtcgtta ttctttttgc cgtttcgatt
     4321 gtgttattta ttgcttttta ttttgtcgaa aaacgtgcaa aagatccgat tatgccattt
     4381 gtattattta aaaacccagt ggtgttaatt gggaacttaa ttggtttctt gattagtgcc
     4441 ttcctaattg gaattaacgt gtatattcca atgtgggcac aaggaatgct tgggcacggg
     4501 gctacgattg ctggatttat gcttgcaccg ctttcagtta catggataat tggttcattt
     4561 atcggcggca aacttttaat gacgcttgga aatcggcata cggttggcat tggcgtttta
     4621 attactgctg caagtggatt aattttagcc ttattccccg cttccacaaa tgatatcttc
     4681 ttctatttaa atagtgcatt tatgggattt ggttttggga taatctttac aacaacaact
     4741 gttaccgttc aagatgcagt accgcgattc caaactggta ttgctacagc ttctaacaca
     4801 ctgtttagaa cagttggtca aacaatcggg gtcgctgtct ttggaactat ctttaactca
     4861 gttcttacaa gcgaattccg cgacgcagct ggcagtgaag taaatcgtag taatctaaac
     4921 caactaatta gcccgcaaac ttctggtaac gttagtgcag acctagttga tccgcttcga
     4981 gatattttat atagcgggct tcatatggtt ttctgggtta tgtttgcttg ctgtatcgtt
     5041 agttatttta ttcattttat cttaccgaaa aaacatattt ccggtgaaaa ataaaaagtt
     5101 tggctccgcg gagccaaact ttttatttta taccattttt ttataaatag ttatcgcaaa
     5161 aacatacgca acaacggtaa ttccgacaca ccaagcaagc gcaatccaaa tatcattccc
     5221 gattggttct gaatacagca atccacgtat cgtattaaca attgaggtca cgggctgatt
     5281 ttctgcaaaa acacgaactg cagttggcat cgtatctgtt ggaacaaaag ctgaactaat
     5341 gaatggtaaa aatatgagcg gataagaaaa tgcgcttgct ccatctactg atttggcagt
     5401 taaaccagga atcacagcaa cccatgtgag cgctaatgtg aataatagca aaataccggc
     5461 tacagaaagc cattccacta ttcctgccga tgaacgaaaa ccaataagaa gagcaactaa
     5521 aataatgagc acaatagaga taacattaga aactaaagaa gttaaaacat gaccccataa
     5581 taccgaagaa cgactaattg gcatagaatg aaatcgttga aataatcctt tttgtacatc
     5641 tgtaaataat cgtaccgccg tataagcaat cccacttgcg attgccatca aaataattcc
     5701 cggcaacaaa taatctacgt aattgtctgt ccccgtttga attgcgcctc caagcacata
     5761 cacaaacatc aacataatca taattggaat aatggcaact gtaataatcg tatcaggact
     5821 acgcataata tgacgcatgg agcgaccaaa taatatgctt gtatcacgaa ttgctttcat
     5881 tttacttcct ccttcccatt aataattgct aagaaaattt cttctagtga tggttgtttt
     5941 tcgatatatt ctacttcagc tggcgggaat aattttttaa gttcatccaa ggttccattt
     6001 gcaataatgg ttccaccgtg aaggatagcg attctatccg caagctgctc tgcttcatct
     6061 aaatattgcg ttgttagtaa tatagttgtt cctccatcag aaagtgtttt aatcgttttc
     6121 cagacttcca ttcgcccttc cggatcaagt ccagttgttg gctcatcaag aaaaatcaca
     6181 tctggggagc caacgagact catcgcaata tccagtcgtc ttgtcattcc acctgaataa
     6241 gtgtctgcac gccgatccgc agctttttca agtccaaaac gtgccaataa gtcatctgcc
     6301 gtttgtgctg gattcttttc accacgtaac ttagcaatga gtaaaatatt ttctcgtcct
     6361 gttaaaagtc catctactgc cgcaaattgt ccggtaagac taatatgttt ccgtactttt
     6421 tccggctccg ttttcacatc aaaactagaa actgtagcaa gtccattatc cgcttttaaa
     6481 agagtcgcta aaatttggat ggttgtcgtc ttgcccgcac cgtttgagcc tagtaatgca
     6541 aaaatttcgc catgttttac ttcaaaatcc acacctttca agacttctgt tttcttaaat
     6601 gacttttcca aacccgtggc tttaatcatc acttctttca tttgaataca accttctttc
     6661 cattttttat taaaactcca ctactcagta atacaggtat tctgtatcac ttattactac
     6721 tacatagtaa caccgagttg ctatcatgtc aataaaaaag tcattttctt tttattaatc
     6781 agaaatgact tttgattttg tacataaaaa aaccgtccgc tgaacggacg gtttaaaatt
     6841 atttcacttt ataaatccaa ccttctggag cttctacatc tccaaattga atgccacata
     6901 gttcatcgaa taaacgcttc gttactggcc ccacttctgt ttcactatgg aatacatgga
     6961 aatcatcttt ggtttgaata ccaccaattg gtgtaataac cgctgccgtt ccacatgctc
     7021 cagcttcttt aaactcatct aatttatcaa tatatacatc accttctaat gcttctaaac
     7081 ctagacgatg ctctgccaaa taaagtaacg aatacttcgt gatacttggc aaaatagaag
     7141 gagaatacgg cgtaacaaat ttatcatctt ttgtaatacc aaagaaatta gcagaaccaa
     7201 cttcttctat ttttgtatga gtagctggat ctaaataaat acaatcacca aaattgcgtt
     7261 cttttgcagc ctggcctgga agtaaacttg cagcatagtt tccgcctact tttgcggcac
     7321 ccgtaccatt tggagcagca cggtcaaaat cggaaacaat aaagttagtt ggcgccattc
     7381 cacctttgaa gtaagggccg actggtgaac agaaaacaga gaaaatatac tctggggctg
     7441 catgaacacc aatattgtca cctacaccaa taacaaatgg acgtaaataa agtgttgcac
     7501 ctgttccata cggcggtaca aattcttcat tggcacgaac aacttgcata acagcatcaa
     7561 taaatttttc agttgggatg tgaggcatta ataaacgctc acagcttttt tgaatacgag
     7621 cagcattccg atctgggcgg aaaagattaa ttgaaccgtc cttacaacga tatgctttta
     7681 aaccttcaaa acattgttgt ccgtaatgaa gcgctgttga accctcacta atatgtagcg
     7741 tattatcttc tgttagcgta ccttcatccc attccccgtc tttccaataa gaaatgtaac
     7801 gcttatccgt tttaatataa ctaaatccta aattactcca gtcaatatct ttactcattc
     7861 aaaatcccca ctttctatca ttaaaacaga attattgtat gtttcagtat agcatattaa
     7921 atagcattat tgcagtgatg tctcgtgaaa aagaaatttt tttcaaataa ataggcaaaa
     7981 tgttctttct tttaacgtaa ttcatgctaa aatagagtaa cttttcaaaa aacaatcccc
     8041 tatgaaggaa tgatttcaag aaaggagaga atgaaaatga cagctcacaa aatgttagat
     8101 gagaaatttt atagtaaatc gctaggagag gaacttgatt taattatctg cttaccacct
     8161 gatttttctc cactatacaa atatccactt ttcattgtac aagatggtaa agattatttt
     8221 cagtttggca aacttgcgcg tcactccgaa gaattagcgc taaatgagca gattcaaaaa
     8281 gccattttca ttggtatccc atacaaaact gttatggatc gtcgcgaaaa atatcatccg
     8341 gacggtaaac aaaacgatgc atatatcaga tttttagcat ttgaactcgt tccttatctt
     8401 gaagaacgct ttccttcttt ccaaatgcct actagtagat tcctgatggg agattcactc
     8461 ggggcatccg tttctttaaa ggcagctctt ctttttccct ttacatttgg taatgtgatt
     8521 ttacattccc cctatgtgga tgacacaatc cttacacttg cagaaaaagt agacccttca
     8581 aaagtgaaaa tcttccatat tatcggtgac cgagaaactg cagtcgaaac atccggaaat
     8641 gaagtgctcg atttcctatc accaaataaa tctttagagc aaattttaac cactcgcgga
     8701 tttgattatt atttccatgt atttaacggt gatcatcgct ggaaatactg gcagccattt
     8761 atcaaagatt ctttacaatt tatgctacca gtgaatacat ttgatttaga aagcatgcgc
     8821 gcataagaaa ggacggaaac aacttgaccg taaagaaagt aacagatgat attggcaaac
     8881 aagccgcact taaaattaga aatgatgttt ttgtcgttga gcaacatgtt gatccagcat
     8941 tagaatggga tgaattcgat gaaatagatt ctgttgtaat gtttgttgat tatgcagaag
     9001 atggcacacc gcttgcaacc ggtagattcc gcgaaaagga tggttatggt aaagtcgaac
     9061 gcatctgtac ccagaaaata gctcgcggca ctgggagcgg ccggagaatc atggaagcca
     9121 ttgaatccga agctaagtct cgtggcttaa caaccttaaa attaggagcc caagtaactg
     9181 ctattccctt ctatgaaaaa ttgggatacg aaacttgctc gggattgttc cttgatgctg
     9241 gaattgaaca taaagaaatg aaaaaacatt aacataggaa atttaataaa aatagttatt
     9301 tcttttatat agaagaaata actatttttt tattagctct atttcgccat ttgccttcgc
     9361 acaaacaatt atatccacat aatgaagaaa taatccatgc tccacaatcc ctggaatttg
     9421 cgctaatttt tcttgccaca tttctgcatc cctaaaagtt tgatttacta tatccaaaat
     9481 atagttcccg ttatttgtca catagatttc tcctgaagat tgtctccgta aaattgtttg
     9541 aacatgctct ttttcaagtg ttctctcaat ttgcttccaa ccaaaaggta ttacttctat
     9601 aggcaaagga aacttcccta agtttcttac aagcttctcc tcactgacaa cccaaatgtt
     9661 tttcaaactc gcacttgcta ccattttttc acgtaatagt gctcctcctc caccttttat
     9721 tccttgaaaa tccgtatcaa tttcatcagc accatcaata gtaatatcta tttccgctac
     9781 gtcatttagc gatttcaaag gtattcctaa attttgtgct tgtttgcttg tttcttcaga
     9841 agttgccacc cctgtaatat gcaaaccatt atttaccatt tctccaagct tttcaatcgt
     9901 gtaatagact gtactgcccg ttccaaggcc cacaaccatt ccatctttaa tccactcaca
     9961 agccttttct cctgctatct tcttttgatt aatcatattc caacctcttt tctagcatta
    10021 aaacattact atatctattg tttcattata ctcgtaccta ctttcaagtt caaaatatgc
    10081 atattttcct aaccttacaa aaatgtaatt agacatttaa agacaaatgt attacagtaa
    10141 gtaagtatta aacgtttatt tttaatattt gt
//
LOCUS       DASDYO010000115        10014 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.115, whole genome shotgun sequence.
ACCESSION   DASDYO010000115 DASDYO010000000
VERSION     DASDYO010000115.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 10014)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 10014)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..10014
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.115"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            85..462
                     /locus_tag="U0290_002384"
     CDS             85..462
                     /locus_tag="U0290_002384"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302420.1"
                     /translation="MKFDDSKPIYKQIVHYIHTEIVTGIYNAGDKLLSVRELATKLEV
                     NPTTIQRAYAELEETEIIYTVRGTGKYLTEDKRRIEQLENDIAKQLTENFISEMSKLG
                     INKEKIIAWVKKVEEVEVNVSGK"
     gene            446..1135
                     /locus_tag="U0290_002385"
     CDS             446..1135
                     /locus_tag="U0290_002385"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302421.1"
                     /translation="MLVGNNIAKSYPNKLVLQNVDFEAKPGDMIVLTGENGSGKTTLL
                     DMLASLKKPDSGTLELDNEVFTTNDIRQQIAYLNNELYAKKSTTIEDYMKQHGLLFEN
                     MELDKWDRLLAGWRINKRLKLGELSTGMLMKVKIGSVLARKAKLYLYDEPFASIDIMA
                     RSEVMKAIISETNPDAITIISSHHLEGTEKLYSKLWLIKDNTLKTIETETYREETGNA
                     LIDFYKEEMNK"
     gene            1132..1836
                     /locus_tag="U0290_002386"
     CDS             1132..1836
                     /locus_tag="U0290_002386"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302422.1"
                     /translation="MTKMITFYLKQISPILLIGLAIILGLNFLGFTMNLLEGTDLLFR
                     AIRGTTVMSLILVLITTWKITKLDTSKENVTLASLSGFSETKKFFGKLFAAYLSAITV
                     ILLQSAFIWYYGFETGRMEAGDALSFVSGTLMMFLFIAMFVCYFVIPVGWLKDHVKAS
                     SLQKAAVILLLFAILIVNLLAEYYLHIYNGPGIISILPNGHFDISLLSIVWNVGLCSV
                     IAGSYIYMKSKKMDTI"
     gene            1851..3851
                     /locus_tag="U0290_002387"
     CDS             1851..3851
                     /locus_tag="U0290_002387"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2302423.1"
                     /translation="MLEIKHLKKSYKLGKKNETPVLKDINVTIQDGEFAAIIGKSGSG
                     KSTLLNIISGLDTDYEGKVLYNGEDLQDIDLDAYHFNHIGFIFQSFHLVNHMSVIENV
                     KVPLYLNPELAESDRNARALDLLKQVGLEDFASKKPTQLSGGQKQRVAIARSLANNPD
                     MIIADEPTGALDSVTSDEIIKLLKDLAAKGTTVIVVTHDLNIADQTDAVLRLADGEVI
                     SFERKKEVVQKVTHKNEKKLRLNWWATAKISFKSFFNRKFRNLLVALGTSIGIIAILL
                     AFGLGNGVNQSLSKIFGTTFSPNQITTYYKEDGGSKSPEPTTPLTSSEIKKIKQLYED
                     ENITEIYERTTVQGIKFEYDGEYLKGISGEMQEANFKPSRYEDLTVKDEYLLSGKMVT
                     SDETGAVIPSSVARAILGKKDSDELTKSDGDKLIGKKITLVYAGRNSDTKNTVKTETI
                     ISGITNPSKEGFARGFDVSTKTMNDFIKTTGIEKPILSVDAFTKTTAEAEEIVEKYED
                     DKDWANYSITNANAFVDTFSQFTDIIVYLIAFIAGLSLAVAGVMIAIVLYIGVVERTR
                     EIGVFRAIGYRKRHIRGLFMMEASYIIILANVLSSLVAMKIAKIASPILETKIGFEDM
                     IHISFWNFLVTLAITITIGFIFSIYPSNKAAKLDAAEALRSE"
     gene            3880..4383
                     /locus_tag="U0290_002388"
     CDS             3880..4383
                     /locus_tag="U0290_002388"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302424.1"
                     /translation="MKKPLKISLIVVGIAVVIFAGVMLSYRFIKSMDVTENAEINKSA
                     TGDHVLLATQGSKFKDSVMDQVKKDMEGKNVHVSIIDTTKLDKVKADDYDKVVLFTTV
                     QSDDIPENVTTFMNDNKDKSIHIAVTADSGRWDDKPKDIDAISEASKAENKQDFVDDL
                     TKAIVAE"
     gene            4526..4726
                     /locus_tag="U0290_002389"
                     /pseudo
     CDS             4526..4726
                     /locus_tag="U0290_002389"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464278.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing N-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
     gene            4822..5658
                     /locus_tag="U0290_002390"
     CDS             4822..5658
                     /locus_tag="U0290_002390"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464279.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2302425.1"
                     /translation="MSVLNIEGAKLSYQKVGQGPILIFIPGANGTGDIFLPLAEQLKT
                     SFSVVMVDRRGYGDSELTAAIPERASHAYDDYRVTRDAADIAALAKALSDEPVYILGS
                     SSGSIVAMHVLKNHPEVVKKIAFHEPPINTFLPDSEMWQEANEKIVQTALTKNMAEAM
                     QLFGETLHIAPIDAESMSKPAVTIDEVTKDSTTQQMKYWFTYEIRQYTSSNISLDDFK
                     PYVHQITLLNGTDSKGSFPQDVNAFIAKQLGLTIVDIPGGHLGYIQKPAGFAKVLLSI
                     WG"
     gene            5784..6464
                     /locus_tag="U0290_002391"
     CDS             5784..6464
                     /locus_tag="U0290_002391"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464280.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2302426.1"
                     /translation="MNIRTELQNSQLCEGLTEAQLNELMNKITVKEKHYKNNEILFYT
                     DEVTKVYILVKGNAAIAKNTSSGKRILGKNVTEPGELAGEIYYFSHRNPFWDYVIVLE
                     PTTVLEISSIDQETLQTLDLALQNQLLVNLLKSVTRKFEYIGEKVRMVSEDSVRAKIS
                     NYLFGIQDDDGSIELTETREEIADYLDITRPSLSRELGRMQKENIIRIEGSSVIILDA
                     IIFDTFIE"
     gene            6545..7156
                     /locus_tag="U0290_002392"
     CDS             6545..7156
                     /locus_tag="U0290_002392"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464281.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear transport factor 2 family protein"
                     /protein_id="HEM2302427.1"
                     /translation="MLLTRNEPFTAEKIQAKTDILELVQFERFCRDNALWDEMETCFT
                     KDSNVKISWFQGTGHGFIEASKKMTNPAPHKIYNTQVWINNDRAVAIMQATIQTRTII
                     NGVEMELNSDAKLVTRVERIEGRWYINAFEGVYEKDSLMPIIPSKLADVPAELLANFR
                     KSYACLALSLTLNGYEIDNNLPGIDRPEQVAQFFKEADEWLLQ"
     gene            7271..8092
                     /locus_tag="U0290_002393"
     CDS             7271..8092
                     /locus_tag="U0290_002393"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEM2302428.1"
                     /translation="MEKSKTVQILLVFSVVALILSMVGVVSIWYGQKNHQTNNAKTTA
                     KKETTVTKKQDTFKITALGDSLTYGVGDTEGGGYVRVVENFYKQKEKNVENVNLAISG
                     AKSDQLLKQLDQKEVQNQIKSADVILMTIGGNDLFRGGEALDDFKSNAIKQAEASYTN
                     NLKQIYQTIRKLNPSAPVFHIGLYNPFMSLKNASEMSAVANEWNMQSQNLSQNEKNII
                     YVPTFDLFQQNGDAYLATDKFHPNHAGYQFIGNRVTEVIQTGGGKDDDGASTSSN"
     gene            8064..8969
                     /locus_tag="U0290_002394"
     CDS             8064..8969
                     /locus_tag="U0290_002394"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464283.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302429.1"
                     /translation="MTELALQVTNLHKKIRKREIIKGISFEVMPGEVFGFLGPNGAGK
                     TTTIRMIVGLIKPTSGTILIGGKDIRKNFTEAMRGLGSIVENPEFYTFLTGQENLAYF
                     ARMDSSIKKERIQEVTELVGLEKRINDRVSTYSLGMRQRLGIAQALLSNPKLLILDEP
                     TNGLDPSGIHEMRDFIRALARNEGISVLVSSHLLSEIELLCDRVAIMTDGTIIKTDQV
                     SHLLSSRAQLRWLATPFEQAKAFLESVTEVEVDGEYLVTAVNEHSAEWNEQLVAKGIQ
                     VHEIDKKKPSLEDLFLELTGGHTID"
     gene            8962..9942
                     /locus_tag="U0290_002395"
     CDS             8962..9942
                     /locus_tag="U0290_002395"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302430.1"
                     /translation="MINLVYNEQLKLWRKKRLIVILALVAIIVAIFTYAQFRQHQEDE
                     KQAGTSDWHVQTQQQIVDLENRLGTGRLPEEYQKYFKVLVGQLQYYLDNDINPNAPGA
                     PTFLKTFVENGISLLFPLFIMVIAADLISAETSAGTMKFLLTRPVKRWRILTSKYISM
                     LLSISAIMVLSAVIAYLISGIVFGYGGWDAPVLTGFGMKDGAVTTTDVYQLPVWQLLL
                     MEFGLAWFVSVVVGVLTMFVSVLVRSTAAVMGIMLASLITGTILTNLVSSWPSAKYLF
                     MVNLQLTNYLNGSSPPVEGMTLSFSMLVLTAWMLVAFILSYFIFTKRDVY"
BASE COUNT         3410 a         1667 c         2052 g         2885 t
ORIGIN      
        1 gattttcctt tgatatagta cattcatagc cagtgtgacc tatgtggtac ggtgatacgg
       61 acagacaggc gaaaggagga aattatgaag tttgatgata gtaaacccat ttataaacaa
      121 atcgttcatt atattcatac agaaattgtt acaggaattt acaatgctgg tgacaagcta
      181 ctatctgtaa gagagttggc aacaaagtta gaagtaaatc cgacaaccat ccagcgagct
      241 tatgcagaac tggaagaaac ggaaattatt tacaccgttc gaggtactgg taaatatttg
      301 acagaagata agaggagaat tgagcaattg gaaaatgaca tcgcaaaaca acttaccgaa
      361 aattttatta gtgaaatgag taaattagga attaataaag aaaaaattat cgcttgggtg
      421 aaaaaagtag aggaggtaga agtaaatgtt agtgggaaat aatatcgcta aatcctatcc
      481 aaataaatta gtcttacaaa atgtagactt cgaagcaaaa ccaggcgaca tgatcgtgct
      541 cactggtgaa aatggtagcg ggaaaacgac cttgctagat atgttagcaa gcttgaagaa
      601 accggatagt ggcacattgg aattagacaa tgaagtattt actactaatg atatccgcca
      661 gcaaatcgct tatttaaata atgaacttta cgctaaaaaa agtactacta tagaagatta
      721 tatgaaacaa catggtttgc tttttgaaaa tatggagtta gataagtggg accgattact
      781 tgctggatgg cgaattaaca aacgactaaa acttggcgaa ctatcaacag gtatgttaat
      841 gaaagtgaaa attggtagtg tgttagcaag aaaagccaaa ttgtatcttt atgatgaacc
      901 ttttgcgagt atcgatatta tggctcgttc agaagtaatg aaagctatta ttagcgaaac
      961 aaatccagat gctatcacga ttatttcttc ccaccattta gaaggaaccg aaaaattata
     1021 tagcaaactg tggttaatta aagataacac gttaaaaact attgaaacag aaacttatcg
     1081 cgaggaaaca ggcaacgcat taatcgattt ctataaggag gaaatgaaca aatgacaaaa
     1141 atgattactt tttatttaaa acaaatcagt cctattcttt tgattggact tgcaattatc
     1201 ttggggctga actttctggg gttcacgatg aatctgctag agggaacgga tttgcttttt
     1261 agagcaattc gaggaacgac ggtaatgagc ctaattctag tgcttattac gacttggaaa
     1321 atcacgaaac tcgacacatc gaaagaaaat gtaacacttg cttctctttc tggattttca
     1381 gaaacaaaga aatttttcgg aaaactattt gctgcttatt tatcagcaat tactgtaatt
     1441 ttacttcaaa gtgcctttat ttggtattac ggttttgaga caggacgaat ggaagcaggc
     1501 gatgcgttat cgtttgtttc tggaacgttg atgatgtttt tatttatcgc tatgtttgtt
     1561 tgttactttg ttattccggt agggtggtta aaagatcatg tgaaggcgag ttctcttcaa
     1621 aaagcggcag ttattctact tctctttgct atcctaattg tcaatttact agctgaatac
     1681 tacttgcata tttataacgg ccctggaatc atttccattt tacctaatgg acactttgat
     1741 atttcccttc tatctattgt ttggaatgta ggcttatgtt cagttattgc aggcagttac
     1801 atctatatga aatctaaaaa aatggatact atttgaaagt aggagaataa atgttagaaa
     1861 ttaaacacct taaaaaatct tataagttag gaaagaaaaa cgaaacacca gttttgaaag
     1921 atattaatgt gaccattcaa gacggagaat ttgcagcaat tataggaaaa agtggtagtg
     1981 ggaagtctac gttgctaaat attattagtg gacttgacac tgattatgaa gggaaagttt
     2041 tatacaatgg ggaagattta caggatattg atttagatgc ctatcatttt aatcatatcg
     2101 gctttatttt tcaaagcttt catctagtca atcatatgtc tgttattgaa aatgtaaaag
     2161 ttccattata tttgaatcct gaattagcag aaagcgatcg aaatgcgaga gcgcttgatt
     2221 tgctgaaaca agtggggcta gaagactttg ctagcaaaaa accaacacaa ctatctggtg
     2281 gacaaaagca aagggtagcg attgcaaggt ctctcgctaa taatccagat atgattatag
     2341 ccgatgaacc aactggagca ctggatagtg ttacttcaga tgaaattatt aaactgctta
     2401 aggatttggc cgcaaaaggg acaaccgtaa tagttgtaac ccatgattta aacattgcag
     2461 accaaactga tgcggtatta cgcctagcag atggagaagt aatttcattt gaaagaaaaa
     2521 aagaagttgt ccaaaaagtt acccacaaaa acgaaaaaaa gttaagacta aactggtggg
     2581 ctactgcaaa aatttctttt aaaagttttt tcaatagaaa attccgaaat ttgctcgtag
     2641 cacttggcac ctcgattgga attatcgcta ttttattagc atttgggctt ggaaatggag
     2701 taaatcaaag tctttcaaag atttttggga caactttttc acccaatcag attacgactt
     2761 attataaaga agacggtggc tcgaaatcac ctgaacctac cactccatta acgagtagtg
     2821 agatcaagaa aattaagcaa ctgtatgaag atgaaaatat tacagagata tacgaacgca
     2881 ctactgtcca aggaattaag tttgaatacg atggcgaata tttaaaaggt atttctggtg
     2941 aaatgcaaga agccaacttt aagccatcac gctatgaaga tttaaccgtc aaagatgagt
     3001 atcttctaag cgggaaaatg gtgacaagtg atgaaaccgg agcagtcatc ccgtcaagtg
     3061 tagcaagagc tattcttgga aaaaaggatt ctgatgaatt aacaaaaagt gatggtgata
     3121 aactcattgg taaaaaaata accttagttt atgccggaag aaacagtgac acaaaaaata
     3181 cggttaaaac agaaacaatt atatccggta ttaccaaccc atctaaggaa ggttttgcta
     3241 gaggatttga tgtttccaca aaaacaatga acgactttat taaaacaact ggtattgaaa
     3301 aaccgatttt atctgtagat gcattcacaa aaacgacagc agaagcagaa gaaatcgtgg
     3361 agaaatatga ggatgacaaa gactgggcga attattcgat tactaacgcg aatgctttcg
     3421 tagatacatt tagccagttt accgatatta ttgtgtactt gattgccttt attgcaggtc
     3481 tttcgcttgc agttgctggc gtgatgattg ctatcgtgct ttatatcggt gtggtggaac
     3541 gaacaagaga aatcggtgta ttccgagcga ttggttatcg taaacgccat attcgcggac
     3601 ttttcatgat ggaagcaagt tatattatta ttttagctaa tgtgctatca agtcttgtcg
     3661 ccatgaaaat tgcaaaaata gccagtccca ttttagaaac gaaaattggc tttgaagata
     3721 tgattcacat ttcgttctgg aatttccttg ttacactcgc aataacaatt actattggct
     3781 ttattttctc gatttatcca agtaataaag cagcaaaatt agatgcagca gaagctttaa
     3841 gatcagaatg acccaactaa cagaaaagag gaatttaaca tgaaaaaacc actaaaaatc
     3901 agcttaatcg tcgtaggaat cgccgtagtc atatttgcag gagtgatgct atcctaccgt
     3961 tttattaaat caatggacgt tacagaaaat gccgaaataa ataaatcagc tacaggagat
     4021 catgtattac tggcaactca aggtagtaaa ttcaaagaca gtgtaatgga ccaagtgaaa
     4081 aaagacatgg aaggcaaaaa cgtacatgtt tcgattatcg atacaacaaa attagacaaa
     4141 gtaaaagcag atgattatga caaagttgtt ctattcacca cagtgcagtc cgatgatatt
     4201 ccagaaaacg taaccacttt tatgaatgat aataaagata aaagtatcca tattgccgta
     4261 acagcagatt ctggccgctg ggatgataaa ccgaaagata ttgatgcaat ttccgaagca
     4321 tcgaaagcag aaaataaaca agatttcgtg gacgatttga caaaagcaat tgtggcggaa
     4381 taagactaac agaaacaccc atcctttggt ggtggctcat aagaaagtat atgaacttat
     4441 tgatagtgac agctaacaaa cagataatgt aaaaagcgta atatgatgga attagaattc
     4501 ctcgtattgc gcttttattt tttgaattat ttttccttgt tataattttg ccgcatctcg
     4561 tatggtttgc gagtttattg agaaaataca attagttagt caatacattt ttattattgt
     4621 cacttatagt aatacggcgc caatgtgcgc ctctaccgaa ctatatgaac atttccttat
     4681 gagcacctac catttggtgg gtgttttttg gaaaataaat ccataatagc tttctccttt
     4741 cgtaaccacg gttacagacg aaatcacaaa agctatctat actaaagtta gattttagat
     4801 aaattagagg agatggtcat aatgagcgtt ttaaacattg aaggagcaaa attatcgtat
     4861 cagaaagtcg gacaaggtcc tattcttatt tttataccgg gagcaaatgg aactggagat
     4921 atctttttac cactggcaga gcaattgaaa acatcttttt ctgttgtaat ggtagatcgt
     4981 cgtgggtatg gggacagtga gttaacagca gctataccgg agcgcgctag tcatgcatat
     5041 gatgattacc gagtgactag agatgctgct gatattgctg cactcgcaaa agcgttaagc
     5101 gacgagcctg tttatatttt agggtcaagc tctggttcga ttgttgctat gcatgtcttg
     5161 aaaaatcacc cagaagttgt taaaaaaata gcctttcatg agccaccaat caatacattc
     5221 ttaccagatt cggagatgtg gcaagaagcg aatgaaaaga ttgtacaaac tgccctaact
     5281 aaaaatatgg ctgaagcaat gcaacttttt ggcgaaacac ttcatattgc ccccattgac
     5341 gcagaaagca tgtcgaaacc agccgtaaca atagacgaag tgacaaaaga ttcaaccacg
     5401 caacaaatga aatactggtt cacttatgaa atccgccaat atactagctc taatatatct
     5461 ttagacgatt tcaaaccata tgttcatcag attacgttac ttaatggtac cgattcaaaa
     5521 ggctcattcc cacaagatgt taatgccttt atagccaaac agctcggatt aactatcgtg
     5581 gatattccag gcggtcattt aggttatatt caaaaaccag ccggatttgc taaagtactt
     5641 ttgtcaatct ggggataaaa ataaaaaatt ctgctaaagg ttaaatttag cagaattttt
     5701 ttgatgcagt cgtaattgct atttaaaaga aagtggtcta tgcttatcgt taaaagtaac
     5761 tttcatttta gaggagaagc aaaatgaaca ttcgaactga attacaaaat agccaattat
     5821 gcgaaggatt aacagaagct caattaaacg aactgatgaa taaaattacg gttaaagaaa
     5881 agcactataa aaataatgag attttatttt atacagacga agtaacgaaa gtatatattt
     5941 tagttaaagg aaatgcggcc attgctaaaa atacaagtag cggtaagcgg attctaggta
     6001 aaaatgtcac agaacctgga gaactggctg gggagattta ttatttctcg catcgcaatc
     6061 cattttggga ctatgtaatc gtgcttgaac cgacaacagt attagaaatt agcagcatcg
     6121 accaagaaac tcttcaaacc ttagatttag ctttacaaaa ccaactatta gtcaatttat
     6181 taaaaagtgt tactagaaaa tttgaatata taggtgaaaa ggtacgaatg gtttcagaag
     6241 actctgttcg tgcaaaaata agcaattatt tatttggcat ccaagacgat gatggcagta
     6301 tcgaattaac agaaacaaga gaagaaattg ccgactatct tgatattaca agaccttcac
     6361 tttcgagaga acttggcaga atgcaaaaag aaaatattat tcgtatcgaa ggaagtagcg
     6421 ttattatttt agatgcgatt atatttgata cttttattga gtaactagta accagcgtta
     6481 catcttttcg tatgcggtaa tggtaagcta ttcgtattaa aagaatgaat acggaggaga
     6541 ttagatgtta ttaactagaa acgaaccttt taccgcagaa aaaatacaag caaagacaga
     6601 catccttgag ctagttcaat ttgaacgatt ttgtcgcgac aatgcacttt gggatgaaat
     6661 ggaaacttgc tttacaaaag attcaaacgt aaaaatttca tggtttcaag ggactggcca
     6721 tggctttatt gaagcatcaa agaaaatgac caatcctgcg ccacataaaa tatacaatac
     6781 gcaagtttgg attaataacg atcgagctgt ggcaattatg caagccacta tccaaacacg
     6841 caccatcatt aatggagtag aaatggaact caattctgac gccaaattag tcacacgagt
     6901 tgagcgaatc gaaggcagat ggtatattaa tgcgtttgaa ggagtttatg agaaagactc
     6961 gttgatgcca atcattccca gtaaacttgc agatgttcct gctgagttgt tagctaattt
     7021 tagaaaaagc tatgcttgcc tagcactttc attaacatta aacggttatg agattgataa
     7081 taatcttccc ggcattgatc gcccggagca agtggctcaa tttttcaaag aagctgatga
     7141 gtggttgctc caataattta aaaaggatag ctagttttta ctagctatcc tttttaaatg
     7201 aaggagtctc attttaaaat atgctatact tagtgaaata taaacctcat gaaacggtag
     7261 gtggttgtca gtggaaaaga gtaagacggt tcaaattcta ttagtttttt ccgttgttgc
     7321 gttaattttg agcatggttg gggtggtatc aatttggtat gggcagaaaa atcatcaaac
     7381 gaataatgcg aaaaccaccg ccaaaaaaga gacgacagta acgaaaaaac aagatacctt
     7441 taaaataacc gcgctcggtg attcgcttac atatggcgtt ggcgatacag aaggcggcgg
     7501 gtatgtccga gtggtggaga atttctacaa acaaaaagag aaaaatgtcg agaatgtcaa
     7561 tcttgctatt agtggggcga aatcagacca gcttctcaaa caattagatc aaaaagaagt
     7621 gcaaaaccaa ataaaatcag ccgatgttat tttaatgacg attggcggaa atgatttgtt
     7681 tcgtggcgga gaagcactgg atgatttcaa aagcaatgca attaaacaag ccgaagcaag
     7741 ctatacgaac aacctgaaac aaatttacca aacgatacga aaattaaatc catccgcgcc
     7801 cgtttttcat attgggctgt ataatccgtt tatgtcatta aaaaatgcga gtgaaatgtc
     7861 ggcagttgcg aatgagtgga acatgcaaag tcaaaatcta tcgcaaaacg agaaaaatat
     7921 catttatgtt ccgacttttg atttatttca gcaaaatggg gatgcatatt tagcgactga
     7981 taaattccat ccaaatcacg ccggatatca gtttatcggt aatcgggtga cagaggttat
     8041 acaaacagga gggggaaaag acgatgacgg agctagcact tcaagtaact aatctgcata
     8101 aaaaaattcg caaacgagaa attatcaaag ggatttcttt tgaagtaatg cccggagaag
     8161 tttttggctt tcttggaccg aatggagctg gcaaaacaac gacgattcga atgattgtgg
     8221 ggctaatcaa accaacatct ggaacgattt taatcggtgg aaaagatatt cgcaaaaatt
     8281 ttacagaagc aatgcgaggt cttggctcga ttgtggaaaa cccggaattc tatacatttt
     8341 taacgggaca agaaaattta gcgtattttg cccgaatgga ttcgtcgata aaaaaagaac
     8401 gtattcaaga agtaaccgag ctagttgggc tagaaaagcg gataaatgac cgagtttcta
     8461 cgtattcact tggtatgcgc cagcgtttag gcattgctca agcgttactt tcgaatccga
     8521 aattattaat tcttgatgaa ccaacaaacg gtttagatcc atctggaatt cacgaaatgc
     8581 gcgactttat ccgtgctctg gctagaaatg aaggtattag tgtacttgtt tcttcccatt
     8641 tattaagtga aattgaactt ttatgtgacc gagtggcgat tatgacagat ggaacgatta
     8701 ttaaaaccga tcaagtttca catcttctta gttctcgtgc acaattacgc tggctggcga
     8761 ctccttttga acaagccaaa gcatttttgg aaagtgtaac tgaagtagaa gtggacggcg
     8821 aatatctcgt gaccgcagtg aatgaacata gcgccgaatg gaacgaacag ttggttgcaa
     8881 aaggcattca agtccatgaa attgataaga aaaaaccatc tctcgaagac ctatttcttg
     8941 agttaacagg aggtcatacg attgattaat ttagtctata atgaacaatt aaaactttgg
     9001 cgcaaaaagc gactcatcgt tattttggcg ctagtggcaa ttatcgtagc gattttcacg
     9061 tatgcacagt tccgacagca tcaagaagat gaaaagcaag ctgggacaag cgattggcat
     9121 gtgcaaaccc aacaacaaat tgttgacctt gaaaataggc tcggaacagg gcgactgcca
     9181 gaagaatatc aaaaatattt taaagtgctt gtcgggcaac tacaatatta tttggataat
     9241 gacatcaacc caaatgcacc tggagcacca actttcctaa aaacgtttgt cgaaaatggt
     9301 attagtttat tgtttccgct ttttatcatg gttatagcgg ccgacttaat tagtgctgaa
     9361 acaagtgcgg gaacgatgaa attcctgctg acaaggcctg tgaagcgatg gcggattttg
     9421 acgagtaaat atatttcaat gttgctttcg atttccgcga ttatggtatt atccgctgtt
     9481 attgcctatc tgatttctgg aattgtgttt ggttacggtg gctgggatgc gccagttctc
     9541 accggatttg gcatgaaaga tggtgctgtt acaacaacag acgtgtacca actgccggtt
     9601 tggcaactac tgctcatgga gttcggactc gcgtggtttg tcagtgtcgt ggtcggcgtg
     9661 ttaacgatgt ttgtatcggt gctcgtccgc tccacagctg ccgtaatggg aattatgctt
     9721 gcttcactca ttaccggaac cattttaacc aacctcgtca gctcttggcc gagcgcgaaa
     9781 tatttattta tggttaattt acaactaacg aattacttaa acggctcgag cccacccgtc
     9841 gaaggcatga cattgagttt ctcgatgctc gttctgaccg cgtggatgct agtcgcgttt
     9901 atcttatcct attttatttt caccaaacga gatgtgtatt aaagagcgct taatggcgct
     9961 cttttttgcg gtcattaaaa gttacttact ttttgtgagc ataaaacttt tctt
//
LOCUS       DASDYO010000116         9860 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.116, whole genome shotgun sequence.
ACCESSION   DASDYO010000116 DASDYO010000000
VERSION     DASDYO010000116.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9860)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9860)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9860
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.116"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..182)
                     /locus_tag="U0290_002396"
     CDS             complement(<1..182)
                     /locus_tag="U0290_002396"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3397 family protein"
                     /protein_id="HEM2302431.1"
                     /translation="MFDWLTNSTAIIIILPVVVFILTMFFSSFKLKKSQRRIMLAADL
                     STIFLIIAVHFFMIVL"
     gene            complement(175..1068)
                     /locus_tag="U0290_002397"
     CDS             complement(175..1068)
                     /locus_tag="U0290_002397"
                     /EC_number="1.1.1.169"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465570.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-dehydropantoate 2-reductase"
                     /protein_id="HEM2302432.1"
                     /translation="MANQLKVGIIGAGAMGLLYAANFADTSELTLFTRRKEQSDLLNQ
                     KGLSLKDNSELKNIHIQATVITDIKKLSEQQLLIIAVKQYSLKSILPLLQSIPERVPL
                     LFIQNGAAHLDSMPLLGNKRTILLGISEHGAGREDDTTVIWRGHGRTKYSIYQGELSE
                     AVTKTLDSNPDFPVEKHASYLDIINEKLFINAVINPLTAVLQVQNGKLLENKEWHELL
                     KTIVKEIQTVLPVENALEKVEVICQVTATNFSSMALDRMDNRMTEIDGIVLPILEKGE
                     SLPTLHALYHLIKGLEGESDV"
     gene            complement(1218..1391)
                     /gene="rpmF"
                     /locus_tag="U0290_002398"
     CDS             complement(1218..1391)
                     /gene="rpmF"
                     /locus_tag="U0290_002398"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465571.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEM2302433.1"
                     /translation="MAVPFRRTSKAKKRKRRTHVKLQLPGMNECSNCGEYRLSHHVCP
                     ECGQYDGKDVANS"
     gene            complement(1482..2018)
                     /locus_tag="U0290_002399"
     CDS             complement(1482..2018)
                     /locus_tag="U0290_002399"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465572.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF177 domain-containing protein"
                     /protein_id="HEM2302434.1"
                     /translation="MKWSISQLKKYRDSNFTINEKADLKKFFQENNIDVRDASPVQVT
                     GELIVHPEEVTANLTMKGDWTLPCARTLEDVIYPYEVHATETFVKSKEQVLDESWHVM
                     EQDMVDLTPVVEELLLVEIPMQVFSEDALEMSNLPRGNEWEMKTEEGNLLEQIAKEPK
                     VDPRLAGLANFFDEKKED"
     gene            2148..3320
                     /locus_tag="U0290_002400"
     CDS             2148..3320
                     /locus_tag="U0290_002400"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465573.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nucleotidyltransferase"
                     /protein_id="HEM2302435.1"
                     /translation="MKATGIVVEYNPFHNGHKLHLNKARELTQADVVIAVMSGSFVQR
                     GEPAILPKWERTRMALAAGVDMVVELPVSFATQHATIFAEEAVRILDAIHVDTLFFGS
                     EHGVAEDFTLAAKKVVENEARFDEAIQLALVDKKTSYARAYTEAFKKLFGQNLLDITK
                     PNNILGFHYALAAQKQNPSISLQTIPREHAGYHDEEANHDQIASATAIRKLILAGKLE
                     EASHYLPASSIAILRNYEGPFLSWTDYWSFLQYRLIQAGSEELEGIRGVSEGIQNRMQ
                     QAATKAQNFSDFIELTKTKRYSNARLQRTALQILLNARSQTSSPYIRILGMNKTGQQY
                     LSLHKKNISLPIITTVSKAPAGLLEEELRATNIYTLAKGLENYQAGDFHIPPILTL"
     gene            3402..5642
                     /locus_tag="U0290_002401"
     CDS             3402..5642
                     /locus_tag="U0290_002401"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465574.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="excinuclease ABC subunit UvrA"
                     /protein_id="HEM2302436.1"
                     /translation="MVQEYIRLRGARENNLQNISLDIPKRKITIFTGVSGSGKSSIVF
                     ETIATESQRQLNETYSAYLRNFLPKYTQPDADSIENLSTSVIIDQKRLGGNSRSTLGT
                     ITDINSILRLLFSRVGKPSIGTANLFSFNDPAGMCPDCHGVGQKVSVDLVKLLDPNKS
                     LKEGAILFPTFSVDSWYWNSYAYSGFFDVNKKIKDYTDEEYDMLLHGKDIKVFLETPM
                     GSMNATYEGLIPKFNRLYIQKEGEMSASTKKRVDKFTHIAPCTTCEGTRLSAQALSCT
                     INGANIADFTAMQLDELKATIASIDDPIAAPMVKSVTERLQHLIDIGLGYMTLDRQTA
                     SLSGGESQRVKMIRHLNSSLTDLLYIFDEPSIGLHPRDVHRLNELLVKLRDKGNTILV
                     VEHDPDVIKIADHIVDVGPHAGKHGGEIQFVGSYTDLLKSDTLTGKFLNRHLPINSKP
                     RQPKGFLTTEKSSRFNLKDIQANIPKEILTVVTGVAGSGKSTLIHSVFLKEYPDAIVI
                     DQSAAHANIRSNPATYTGIMDPIRKAFGKENDVSPSLFSYNSKGACENCKGLGFTTMD
                     LAFMDSIRTPCEVCHGKRFQDSVLQYKLNGKSISDVLELTVSEALDFFTDKKILKKIE
                     AMEEVGIGYVTLGQALSTLSGGECQRLKLANELHKKGSIYIMDEPTTGLHMSDIEHIL
                     TIIHSLVNKGNTVIVIEHNVDIIRNADWIIDLGPEGGSAGGQIIFEGAPLDLLENKQS
                     LTAKYL"
     gene            complement(5685..6725)
                     /locus_tag="U0290_002402"
     CDS             complement(5685..6725)
                     /locus_tag="U0290_002402"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465575.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PDZ domain-containing protein"
                     /protein_id="HEM2302437.1"
                     /translation="MRKEWKKITAIVLLIIIIAGFFIPVPYYISKPGGTEELAPLVTV
                     DDHPNKKDGSLSLVTIAMGKANIYTYMTAKFLPYHELEKDSDIKYENESDEEYNVRQM
                     QMMNESKNNAIQVAYKAAGQEVKVTYDGVYVLSVKDDVPAADVLHAGDLITEIDGNAF
                     KSSQEFIDYIHSKKVGDTVKINYKHGDKNEQANIKLTAIDKKGTPGIGITLVDDEKIT
                     ADPTVKIDSEKIGGPSAGLMFSLEIYSRFQKNDLTDGKKIAGTGTIDPDGTVGRIGGI
                     DQKVVAADKSGAKVFFAPNDPITDEMKKSDPSIESNYDTAVKTAKDIDSKMKIVPVKT
                     FQDAVDYLEKLQ"
     gene            complement(6744..7226)
                     /gene="coaD"
                     /locus_tag="U0290_002403"
     CDS             complement(6744..7226)
                     /gene="coaD"
                     /locus_tag="U0290_002403"
                     /EC_number="2.7.7.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465576.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pantetheine-phosphate adenylyltransferase"
                     /protein_id="HEM2302438.1"
                     /translation="MGDKIAVIPGTFDPITNGHLDIIERAAKIFDVLYVSVLNNSSKK
                     PLFTIEERMEMIRQVTAHLPNVQVESASGLTVDYAATRGATAIVRGLRAVSDFEYEMQ
                     IASMNRTLNAEIETFFVMTNTKYSFLSSSMVKEVAQYQGDISELVPEIVNEQVQAKFK
                     "
     gene            complement(7229..7786)
                     /gene="rsmD"
                     /locus_tag="U0290_002404"
     CDS             complement(7229..7786)
                     /gene="rsmD"
                     /locus_tag="U0290_002404"
                     /EC_number="2.1.1.171"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465577.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA (guanine(966)-N(2))-methyltransferase
                     RsmD"
                     /protein_id="HEM2302439.1"
                     /translation="MRVIAGERKGHALKAVPGNNTRPTTDKVKESLFSIIGPFFDGDM
                     VLDLFAGSGGLGIEALSRGAERAVFIDQAALAIKTIRQNLEGCHFTERAEVYRNDAER
                     ALKLLHKNEWKFDLVFLDPPYKKQQLEKLLVTLEKLELVNENGRIICEHDKEAIMPDT
                     IGKFEKIKSVSYGITVLSIFEFQEA"
     gene            complement(7883..8164)
                     /locus_tag="U0290_002405"
     CDS             complement(7883..8164)
                     /locus_tag="U0290_002405"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465578.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbG family protein"
                     /protein_id="HEM2302440.1"
                     /translation="MENDRQAIVVWMNHLKQVRSLKRFGNVHYVSRKLKYAVLYCDMA
                     EVEDISNKVSRFHYVKRVEMSFRPFLKTEYESKKEMMYEHKNEDVQISI"
     gene            complement(8195..8644)
                     /locus_tag="U0290_002406"
     CDS             complement(8195..8644)
                     /locus_tag="U0290_002406"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465579.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YlbF family regulator"
                     /protein_id="HEM2302441.1"
                     /translation="MLATMENMALLDLSDELASMILNSEEAQNYKLAKEALLNDATSQ
                     KNIRQFIRIKEQYEEVQRFGRYHPDYKEVTRKTRAYKREVDMDQNVAAFRRAEMDLQS
                     LLDEISLLLASAVSENIKVPTGNPFFETKSACSTGGCGSGGGCGCSA"
     gene            complement(8692..9747)
                     /locus_tag="U0290_002407"
     CDS             complement(8692..9747)
                     /locus_tag="U0290_002407"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465580.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CAP domain-containing protein"
                     /protein_id="HEM2302442.1"
                     /translation="MKFIMRVAVLLIICLFIGYNTDLFFSKSVEKNTAEDTATKSNFP
                     DNKKTTNENPKQVQDSSSLARFINKNVSELKKEFGDPVRVDKTAYGYDNYIYSQPGTS
                     YMQVGVTKNIVQTIYALGQDLNVMPYTIGMSTEKVFTDANLQSEISFNYKDSYYKFEL
                     SEEDLNARPIVNIGSGVYAQLNFDKFKSKLISVRYLNKLSFVKMRPYELSYQGEIYEE
                     KLTPADWNAIDDASSKQVLEITNVIRDRYGIEEVAWDESVAKVAYGHSVDMKKNDYFD
                     HTSPTQGDLSKRLSKGDVKYTKAGENIAYNYVDSAAAVEGWLNSKGHRENLLDGSYTY
                     MGAGTYRKYYTQNFIIK"
BASE COUNT         2802 a         2040 c         1791 g         3227 t
ORIGIN      
        1 aatagcacaa tcatgaaaaa atgaacagct ataatcaaga aaatagtgga taagtcagcg
       61 gccaacataa ttctccgctg acttttcttt agtttgaaac tggaaaaaaa catcgtcaaa
      121 ataaacacca caactggtaa aataataatt attgctgttg aattagttaa ccaatcaaac
      181 atcgctttct ccttccaacc ctttaattag atgatataac gcatgaagcg taggaagtga
      241 ctcccctttt tctaaaattg gcagcacgat tccatcaatt tctgtcattc gattatccat
      301 tcggtcaaga gccatcgaag aaaaattagt agctgtcact tggcagatta cttccacttt
      361 ttctaaagca ttttctactg gcaaaaccgt ttgtatttct tttacaatcg tctttaataa
      421 ctcgtgccat tctttatttt caaggagctt tccattttgg acttgaagaa cagctgtgag
      481 cggattaatt actgcattaa taaataattt ttcatttata atgtctaagt aactagcatg
      541 tttttcaact ggaaaatctg gatttgagtc taatgttttt gttaccgcct cacttagttc
      601 gccttgataa atactatact ttgttcggcc atgaccacgc caaatgactg ttgtatcatc
      661 ttcccgcccc gccccgtgtt cgctaatacc tagcaaaata gttcgtttat taccgagtag
      721 cggcatgcta tctaaatgcg ccgctccatt ttggatgaat agtaacggca ctcgttcagg
      781 tatcgactgt agcagtggca aaatgctttt tagtgagtat tgtttaactg cgataattaa
      841 taattgttgt tctgataact ttttaatatc tgttattact gtggcttgta tatgtatatt
      901 ttttaattcg gaattatctt ttaaagaaag acctttttga tttaataaat cgctttgttc
      961 ttttctccgc gtaaaaagag tgagctcgga tgtatcggca aaatttgctg cgtataaaag
     1021 ccccatcgct cctgctccaa taattcctac ttttagttgg ttcgccattt agttcagctc
     1081 catattgatt aatgctttta ttttatcaga agtagcattc ttttgcactt ttgtgcgcaa
     1141 acaaaaacct cgaaagaccc atggcgtctt tcgaggttcg tcttcaacaa gtgaaacgtc
     1201 acttgttttt agcaatatta gctgtttgct acatctttgc catcatattg tccacattct
     1261 gggcatacgt gatgggaaag tctgtattcg ccgcaattcg agcattcgtt catgcccgga
     1321 agttgaagtt taacgtgtgt acgacgctta cgctttttgg cttttgaagt tcttctaaaa
     1381 ggtactgcca tttccttaca cctccttgac gataactaag tacttgtatc gttaatctaa
     1441 gaaaaataaa ttccttaata tattccagct tcacggggag tttagtcttc ttttttctca
     1501 tcgaaaaaat tggctaatcc cgcaagacga ggatccactt ttggttcttt tgctatttgt
     1561 tctagtaggt taccttcttc tgttttcatt tcccattcat tgcctcgtgg aaggttactc
     1621 atttcgagtg cgtcttcact gaaaacttgc atcggaattt cgactagtaa aagttcttct
     1681 actacagggg ttaaatcgac catatcctgt tccatcacat gccaagattc atctagaact
     1741 tgttctttgg atttcacaaa ggtttccgtc gcatgcactt cataaggata aataacatcc
     1801 tcaagtgtac gagcacatgg aagtgtccaa tcgcctttca tagtcaggtt agcggtaact
     1861 tcttctgggt gtacaattag ttccccagtt acttgtacgg ggcttgcatc acgaacgtct
     1921 atattgttct cttgaaagaa cttttttagg tcagcttttt cattaatcgt gaagttgctg
     1981 tcacgatatt tttttaattg actgatagac catttcatcc tacatcactc caagcgcaac
     2041 acaaaatatt atagcttttt taaaggcttt tgtcaatgct ttttcgggga gtaaaaccgc
     2101 tgccttcatt ttatgctaaa atagattatc taaaggaggg aaccgaaatg aaagcaactg
     2161 gaattgtggt ggaatataac ccttttcata atgggcataa actacatcta aataaagcgc
     2221 gcgagttaac tcaagcagat gtggtgattg cggtaatgag tggctcgttt gtacaacgag
     2281 gcgaaccagc gattttgcca aaatgggaac gtactaggat ggctctcgct gctggcgttg
     2341 acatggtggt tgaactccct gtctcattcg cgacacaaca tgcgacgatt ttcgcagaag
     2401 aagcagttcg tattttagat gccattcatg tggatacgct gttttttggc agtgaacatg
     2461 gagttgcgga agattttaca ttagctgcga aaaaagtagt cgaaaacgaa gcccgttttg
     2521 atgaagcgat tcagctggcg ttagttgata agaaaacttc ttatgctaga gcttatacag
     2581 aagcttttaa aaagttgttc ggccagaact tgctggatat cacgaaacct aataacattc
     2641 tcggtttcca ctacgccctt gctgcccaga aacaaaaccc gtccatttct cttcaaacca
     2701 ttcctcgtga acatgcagga taccatgacg aggaagcaaa ccatgaccaa atcgcaagcg
     2761 cgaccgcgat tcgaaaatta atacttgctg ggaagttaga agaagctagc cactatctcc
     2821 ctgcttcttc tatagctatt ttacgcaatt atgaggggcc atttttatcg tggacagatt
     2881 attggtcatt cctgcaatat cggttaattc aagcaggctc agaagaactg gaaggaattc
     2941 gcggtgttag tgaaggaatt caaaaccgga tgcagcaagc agcgactaaa gcgcaaaact
     3001 tctctgattt tatagaatta accaaaacaa agcgatacag taatgcgcga ttacaacgaa
     3061 cggctttaca aattttatta aatgcgagga gtcaaactag ctccccttac atccgaatac
     3121 tcggcatgaa taaaacgggg caacaatatc tatcgcttca taagaaaaat atttctctcc
     3181 ctattatcac gacggtttcc aaagcaccag ctgggctttt agaagaagaa ttacgtgcga
     3241 caaacattta tacgctggca aaaggactgg aaaattatca ggctggcgac tttcatattc
     3301 caccaatttt aaccttgtaa tctttacaag gtttttggtt gacttttatg gggctatttt
     3361 gctaagatgt ttgtccgact caaaaaacag gaggtatgtg tatggtacaa gaatatattc
     3421 gattaagagg agcgcgtgaa aacaatctcc aaaatatttc cctagatatc cccaaacgaa
     3481 aaatcactat ttttactggt gtatctggtt ccgggaaatc ttctattgta tttgaaacta
     3541 ttgccacgga atcgcaaaga cagttaaacg aaacatacag cgcctatctt cgtaatttcc
     3601 ttccgaagta tacgcagccg gacgcagatt caattgaaaa cctctccacc tctgttatta
     3661 ttgatcaaaa acgacttggc ggtaattccc gctccaccct tggtaccatc acggatatta
     3721 attcgatttt gcgattactt ttctcgcgtg tcggcaagcc tagtatcggg acagcaaatt
     3781 tattttcttt taacgaccct gctggtatgt gccctgattg ccatggtgtt ggacaaaaag
     3841 tttcggttga tttagtcaaa ttacttgatc caaataaatc gctcaaagaa ggcgccatct
     3901 tatttccgac gttttcggta gattcatggt actggaattc ctatgcttat tccggctttt
     3961 ttgatgtgaa taaaaaaata aaagattata ctgacgaaga atacgatatg ttgttacatg
     4021 ggaaagatat taaagttttc ctagaaacac ccatgggaag catgaacgct acatatgaag
     4081 ggttgattcc aaaattcaat cgtttgtata ttcaaaaaga aggcgaaatg tccgcctcta
     4141 ctaaaaaacg tgtcgataaa ttcacccata ttgcgccttg tacaacttgc gaaggcacga
     4201 gactctccgc gcaagcatta tcttgtacaa taaatggtgc aaatatcgcc gacttcacag
     4261 cgatgcaatt agatgaatta aaagcaacga ttgcgagtat tgatgaccct atcgctgctc
     4321 caatggtcaa aagtgtcaca gagcgattgc aacatttgat tgatattggt cttggttata
     4381 tgacacttga ccgccaaact gcttctcttt ctggtggtga atcgcaacgt gtcaaaatga
     4441 ttcgtcattt gaatagcagc ttgactgatc tgctttatat tttcgatgaa ccaagtatcg
     4501 gtcttcatcc acgagatgtt catcgactca atgaattact cgtgaaattg cgcgacaaag
     4561 gaaatacgat tctcgtggtg gaacatgacc cagatgtgat caaaatcgcc gaccatattg
     4621 tcgatgtcgg tccgcacgca ggaaaacatg gcggtgagat tcagtttgtc ggaagttaca
     4681 ccgatttgct gaaatcagac acactaactg gcaagttcct caatcgccat ttaccaatta
     4741 atagcaaacc gagacaacca aaaggttttt taacaactga aaaaagtagt cgctttaacc
     4801 taaaagatat tcaggccaac attccaaaag aaattcttac tgtagtaact ggcgtggctg
     4861 gttcgggtaa gagtaccttg attcattctg ttttcctaaa agaatatcca gatgcgatag
     4921 tgatcgacca atcagccgct catgccaata ttcgctctaa tcctgccacc tatactggga
     4981 taatggaccc gattcgaaaa gcatttggaa aagaaaatga tgtcagtcca tcactcttta
     5041 gttacaattc caaaggcgcc tgcgaaaact gtaaaggact tggtttcaca actatggatt
     5101 tagcttttat ggattcgatt cgcacacctt gcgaagtatg tcacggcaag cgattccaag
     5161 attctgtttt gcaatataag ctaaatggta aatccattag cgatgtgtta gaactaactg
     5221 tctcagaagc actcgatttc tttacggata aaaaaatctt gaagaaaatt gaggcaatgg
     5281 aagaggttgg aattggttat gtcacgcttg gccaagcact tagcacctta tcaggcggtg
     5341 agtgccaacg tttaaaactc gccaatgagc ttcataaaaa agggtcgatt tatattatgg
     5401 atgaaccgac gactggtctt catatgtcag atatcgaaca tattttgacg attatccact
     5461 cacttgtaaa taaaggaaat accgttattg taattgaaca taatgtcgat attattcgta
     5521 acgcagactg gattatcgac cttggcccag aaggcggaag tgctggcgga caaattatct
     5581 tcgaaggcgc tccccttgat ttacttgaaa ataaacaatc cttaactgcc aaatatcttt
     5641 aataaaaaaa gccgttttgt ctatagcaga caaaacggct ttttttattg tagtttttct
     5701 aaataatcca cagcatcttg gaaagtttta actggaacga ttttcatttt ggagtcaatg
     5761 tctttcgctg ttttaactgc tgtatcgtaa ttactttcga tacttgggtc gctttttttc
     5821 atttcatcgg taattggatc attgggagca aagaaaacct tcgcaccgct tttatctgcg
     5881 gcaacgacct tttgatcaat tccgccgatt ctaccaacag ttccgtcagg gtcaatcgta
     5941 ccagttccgg cgattttttt gccatctgta agatcatttt tttggaaacg gctgtaaatt
     6001 tctaaactga acattaaacc ggcagaaggt ccaccgattt tttctgagtc gattttcaca
     6061 gttggatctg cggtgatttt ttcatcatcc acaagcgtga taccgattcc tggagtgcct
     6121 tttttatcaa ttgctgttaa tttgatgttg gcttgctcat ttttgtcgcc gtgtttgtag
     6181 tttattttga ctgtgtctcc cactttttta ctgtgaatat aatcaataaa ttcttggctt
     6241 gatttaaacg cattcccatc aatttctgtg attaggtcgc cagcgtgaag gacatcggct
     6301 gctggaacgt catcttttac gcttaatacg tatacgccat cataagtgac tttgacttct
     6361 tgaccggctg ctttataagc cacttgaatg gcattatttt tggattcgtt catcatttgc
     6421 atttggcgaa cgttatattc ttcgtcgctt tcattctcgt atttgatatc gctatctttt
     6481 tctaactcat gatatggcaa aaatttagcg gtcatatatg tataaatatt cgcttttccc
     6541 attgcaatcg tcactagact gagcgaaccg tcttttttat ttggatggtc atcaactgta
     6601 acgagtggag caagttcttc cgtaccacca ggttttgaaa tataatacgg aactggaata
     6661 aaaaagcccg ctataataat aattaacagc actatcgccg ttattttttt ccactcttta
     6721 cgcattttct gtccatctcc cacttactta aattttgctt gtacttgttc gttcactatt
     6781 tcaggaacaa gttcgctgat atcaccttga tactgcgcca cttcttttac catactggaa
     6841 cttaaaaaag aatatttcgt attagtcatg acaaaaaaag tttcgatttc cgcattgagc
     6901 gttcggttca tcgaagcaat ttgcatctcg tattcaaaat cactcaccgc tcgaagccct
     6961 ctgacaattg cagtagcccc gcgcgtagca gcataatcaa cagtcaatcc gctcgcactt
     7021 tccacttgaa catttggcaa atgagcggtt acttgtctaa tcatttccat ccgctcttct
     7081 atcgtgaaaa gtggtttttt ggatgagttg tttaaaacgg aaacatacag cacatcaaaa
     7141 atcttcgctg cccgttcaat aatgtctaag tgcccattcg taatcggatc aaatgtcccg
     7201 ggaataacgg caattttgtc acccatttct acgcctcctg aaattcaaat atagataaaa
     7261 cagtaattcc ataagaaact gatttgattt tctcgaattt accgattgta tctggcatga
     7321 ttgcttcttt gtcatgctcg caaataattc ttccattttc gttaactaat tctaattttt
     7381 ctaaagttac tagtaatttt tctaattgtt gctttttata tggtggatct aagaaaacaa
     7441 ggtcgaattt ccactcattt ttatggagta atttgagtgc tcgttcggca tcatttcggt
     7501 atacttccgc acgctctgta aaatggcatc cttctaagtt ttggcggatt gttttaattg
     7561 cgagcgctgc ttggtcaata aaaacagctc gttcggcacc tctactcaac gcttcgattc
     7621 caagcccacc actgccagca aataaatcaa gcaccatatc cccgtcaaaa aagggaccaa
     7681 taatcgaaaa taaggattct tttactttat ctgttgttgg tctcgtattg tttcctggaa
     7741 cagcttttag agcgtgtcct tttcgttctc ctgcaatgac tctcatgttt ttgcacaacc
     7801 tttacttcaa tgtctttttt actttatcac aaatagaagc aaaaaaacag caagactagt
     7861 tgagatagtc ttgccgtttt ggttagatac tgatttgcac atcttcgttt ttgtgttcgt
     7921 acatcatttc ttttttggat tcgtattctg tttttaagaa cggacggaaa gacatttcca
     7981 cgcgtttcac ataatgaaaa cgagaaactt tgttagagat atcttctact tcagccatat
     8041 cacaatataa taccgcatat ttcaacttgc gcgatacata atgcacattt ccaaatcgct
     8101 tcaaagatct aacttgttta agatgattca tccaaacgac gatagcttgt ctatcatttt
     8161 ccattgttta agccccttct ttttaggata agctttacgc tgaacaaccg cagcctcccc
     8221 cgctgccaca tccacctgta gaacaagcag attttgtttc aaaaaacgga ttaccagttg
     8281 gtactttgat attctctgaa actgcacttg cgagaagcag gctgatttcg tccaagagag
     8341 attgtaaatc catctctgcc cggcgaaaag ctgccacatt ttgatccata tcgacttcgc
     8401 gtttataagc acgagtcttt ctggttactt ctttatagtc aggatgatac cggccgaacc
     8461 gctgcacttc ctcgtattgt tcttttattc gtatgaattg acgaatattt ttttgtgaag
     8521 tagcgtcatt tagcaacgct tccttagcaa gtttataatt ttgcgcttcc tcggagttta
     8581 gaatcatgct agcaagctca tctgataaat cgagtagcgc catattttcc attgtagcga
     8641 gcaatctagc cacctccata taacttactt ttttattata ccatagaact attatttaat
     8701 aataaaattt tgcgtatagt attttcgata tgttcccgca cccatatagg tatatgaacc
     8761 atctagtaga ttttctctat gtcctttaga gttgagccaa ccttctactg ctgctgcact
     8821 atcgacatag ttataggcga tattttcacc agctttagta tatttgacgt cccctttact
     8881 aagtcgtttg cttagatctc cttgtgtcgg tgaagtatgg tcaaaataat catttttctt
     8941 catatcaaca ctatgtccat atgcaacttt cgcaacagac tcgtcccaag ctacttcttc
     9001 tattccgtat cgatcacgaa taacattagt gatttctagc acttgtttac tagaagcatc
     9061 atcaattgca ttccaatctg ctggcgtcaa cttttcttca taaatttcac cttggtaaga
     9121 taattcatag gggcgcattt tgacgaagga taatttattg aggtaacgaa cactaatcag
     9181 ttttgactta aatttatcga aattcagttg cgcataaacg ccacttccaa tgttaacaat
     9241 cggacgggca tttaagtctt cctcagaaag ttcgaattta taatagctgt ctttatagtt
     9301 gaaggatatt tccgattgca aattggcatc ggtaaatact ttttcggtgg acataccaat
     9361 cgtatatggc atgacattta aatcttgtcc tagcgcataa atggtttgca cgatattttt
     9421 tgttacacct acttgcatat agcttgttcc tggttgacta taaatgtaat tatcgtaacc
     9481 gtatgctgtt ttgtctacac gcaccgggtc cccaaactct ttctttaatt cacttacgtt
     9541 tttattaata aatcttgcca agctggaact atcttgcact tgtttcggat tttcattcgt
     9601 tgttttttta ttatcaggaa aattagactt tgttgccgta tcttcggctg tatttttctc
     9661 tactgattta ctaaaaaaaa gatctgtgtt gtatccaatg aacaggcaaa tgattaatag
     9721 cacagctact cgcattataa acttcacatt ttgccctcct cggcagtatt ttgttttctt
     9781 gatgtaactt tcattttacc aatactatta tcatttgaaa agctttaaaa atcataaaaa
     9841 aaacaattac aaggaaacgc
//
LOCUS       DASDYO010000117         9417 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.117, whole genome shotgun sequence.
ACCESSION   DASDYO010000117 DASDYO010000000
VERSION     DASDYO010000117.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9417)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9417)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9417
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.117"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(58..2388)
                     /gene="secA2"
                     /locus_tag="U0290_002408"
     CDS             complement(58..2388)
                     /gene="secA2"
                     /locus_tag="U0290_002408"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464111.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory Sec system translocase SecA2"
                     /protein_id="HEM2302443.1"
                     /translation="MRQNYDDRKIVKQYREIARQIVKKEGLYKNMDQAELCEQTNFWR
                     EKFKTKPMTDRDKINIFALAREAASRIIGLDAVVVQLIGALVLGDGKVAEMKTGEGKT
                     LMSLFVMFIEVMRGNRVHLVTANEYLARRDREEIGQVLEYLGVSVALNESGLDIAQKK
                     AIYTADVIYGTASEFGFDYLRDNMVRQKEDKVQSGLDFVLIDEADSILIDEARTPLLI
                     SDRKEEDLSLYHTANKLVKKMMKDDYEMEEHKRFVWLNDAGIEKAQKFWGVESLYSAE
                     AQSELRITMLLMRAHFLMHKDKDYVVLDDEVLIIDPHTGRALPGRRFNDGLHQAIEAK
                     EGVEVKEESRTLATITIQNYFRMYKKISGMTGTAKTEEEEFRQIYNMDVVVIPTNLRV
                     NREDMQDDIFYTKKEKGRAIVYEVSWRYEKGQPTLIGTSSIKSNEWISGLLDAAGIPH
                     QVLNAKNHAQEAEIIAKAGKRGMVTLATNMAGRGTDIKLDPDVHKLGGLAVIGTERHE
                     SRRIDLQLMGRSGRRGDPGFSKFMISLEDDLLEQFESKSWEKLSTKLKRKAPRDGKPV
                     NSRKIHAVVVDAQKRLEGANYDIRKDLLSYDEVIDLQRKMVYKERDLLLERNKLGVSS
                     EKILREVAEYSFIHPSDIPEEELEIYYSRQKELLGGTKFPISFDQVTLMDPREVVEEI
                     VSWHKKERNKFPAETIAAIEREVYLNLMDQMWVMHLDAMVQLREGIHLRAYGQQDPLV
                     MYQKEGAQLFEKFQADYHFYFAHALLELDPDGLIQG"
     gene            2813..4222
                     /locus_tag="U0290_002409"
     CDS             2813..4222
                     /locus_tag="U0290_002409"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464110.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="invasion associated endopeptidase"
                     /protein_id="HEM2302444.1"
                     /translation="MKKATIAATAGIAVTAFAAPTIASASTVVVEAGDTLWGIAQSKG
                     TTVDAIKKANNLTTDKIVPGQKLQVNEVAAAEKTEKSVSATWLNVRSGAGVDNSIITS
                     IKGGTKVTVESTESNGWNKITYNDGETGFVNGKYLTDKVASTPVAPTQEVKKETTTQQ
                     AAPAAETKTEVKQTTQATTPAPKVAETKETPVVDQNATTHAVKSGDTIWALSVKYGVS
                     VQDIMSWNNLSSSSIYVGQKLAIKQTANTATPKAEVKKEAPAAEKQAAPVVKENTNTN
                     TNTTTEKKETTQQQTAPKAPTEAAKPAPAPSTNTNANKTNTNTNNTNTSTPSKNTNTN
                     TNSNTNANQGSSNNNSNSSASAIIAEAQKHLGKAYSWGGNGPTTFDCSGYTKYVFAKA
                     GISLPRTSGAQYASTTRISESQAKPGDLVFFDYGSGISHVGIYVGNGQMINAQDNGVK
                     YDNIHGSGWGKYLVGFGRV"
     gene            4310..5494
                     /locus_tag="U0290_002410"
     CDS             4310..5494
                     /locus_tag="U0290_002410"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464109.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent rRNA methyltransferase"
                     /protein_id="HEM2302445.1"
                     /translation="MKNLVKVKVFPKFTKGYKEGYPLILKERMEKWPKELQEGDVLEL
                     TDTNGQFIARGYHGEQNKGSGWLFTWDKKQQLDEDFLTNLITTAIEKRQFLFADDSTT
                     AFRIFNGEGDGLGGFTVDFYDGYLVIQWYSLGIYAFQKMIIDIFLSFPEIKGIYEKRR
                     FQEDTKDDFVAGQKATFPLIIKENGINYATYLDDGWMTGIFLDQRDVRRRISEDYSVS
                     KNVLNTFSYTGAFSVAALFGGASKTTSVDVAGRSLSKTKEQLEVNGLDPNEQAIIVED
                     VFHYFKYAARKQLTFDLVVVDPPSFARTKKVTFRAAKDYPAMLREIIDITAPNGTIIA
                     STNYAGFGMKAFKKLIAEAFQTSDRTYKIVETHSLPADFTVNKNFPEGNYLKVLFLTL
                     DI"
     gene            complement(5525..6181)
                     /locus_tag="U0290_002411"
     CDS             complement(5525..6181)
                     /locus_tag="U0290_002411"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464108.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2302446.1"
                     /translation="MFAYDIYEPIGRKDEDTFPVIFALHGFGGDELEMAGRLELLMDR
                     FVVVSMRGDVEYGPAYGFYHMVTEGDPNPQEVDYISLRVAQFIDKICTDYISIDKEQV
                     FLAGFDQGAVLTISIMQSYGGQYKAAALLSGRLPYYMEERPANLMLKDKRIFIGHGIE
                     DAVIQISEADDIARLFEKMGCHVEKHRYFIGHNVNEAEEDDLYRWFESFLPNQPVKNK
                     "
     gene            complement(6203..6412)
                     /locus_tag="U0290_002412"
     CDS             complement(6203..6412)
                     /locus_tag="U0290_002412"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302447.1"
                     /translation="MANIEYEIIEEIGVLSENARGWRKELNKISWNGRPPKYDIRDWS
                     ENHEKMGKGITLTDEEAEVLKKLLD"
     gene            6577..7329
                     /locus_tag="U0290_002413"
     CDS             6577..7329
                     /locus_tag="U0290_002413"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464106.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter ThrE family protein"
                     /protein_id="HEM2302448.1"
                     /translation="MSTETTDYLLETCLMAGKIMMESGAEMYRVEDTMNRIATIASNK
                     KGISFVTPTGLFMSLEGERNVQLQQIPTRTINLEKVSMVNEFSRDFAEKRISLKELHT
                     KLVNLDKDVRYFPIWLQIIAASLVSGSLMVIFGGGWFDFIPTCIIGAIGFIIFYYTQI
                     FMKVKFLAEFLASLSVGLLAVLTISIGWGINLDTMIIGGVMPLVPGVPITNAVRDLIA
                     GHLLSGMARGTEALLTSCAIGIGIAVVFRFFL"
     gene            7343..7801
                     /locus_tag="U0290_002414"
     CDS             7343..7801
                     /locus_tag="U0290_002414"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464105.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="threonine/serine exporter family protein"
                     /protein_id="HEM2302449.1"
                     /translation="MDLVWTIIIQLVLSYVATVTFAIITNVPKRALNACGITGTFGWM
                     AYWTLMQMDSGTGASSLAGAFVVAVLSHFFAKYKKLPITIFNVPGIVPLVPGGLAYQA
                     VRNFVLGDYTEAIGFSVQVTVVAGAIAAGLMLSEVFNHSIRTFRERKERI"
     gene            complement(7856..9319)
                     /locus_tag="U0290_002415"
     CDS             complement(7856..9319)
                     /locus_tag="U0290_002415"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464104.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2302450.1"
                     /translation="MKKKYILCLFAVMLFCTGFLFGNSQVDAAETDTSNVTYKYIDIS
                     TLTETQKNSIIKGKPNETLTNDYENYSFVYQKNTSGPTTNTDNTSDNNKDQNGTLLKA
                     GDVGPNIYLVILGFILLGSGIGLLTLKKRHAKQLLVFLLVLGGSSLLVGSIVQATENS
                     NLKTQESQTVVKGTKETKQPESIAGYTYVGYIHTSKNNTAPPVEKGIVTVNYQDEQGN
                     SVAATETLEGDIGKPYQTSMKNIEGYTWKEVKGEATGTFTEKAQVVTYVYQKVSVATV
                     TVRYLDQDGKPIHEPQTISGNVGEPYDASTDKYKLQIDGYVLDTTKLPNNANGTFTNQ
                     ATQVTYIYTKEAQDVTITIKFVDNNGNPFVLTDLTTYKNGDLVPVYPNLDQYHMRLNY
                     NQQIYSQGEAVSDIVLSAKEGETYSLPERMTFNIIDDKGNEIPYVISQNPDFSSSGIE
                     KWENYRSIPANHEGTLTGENVVVTYQIFVYGVMIPAP"
BASE COUNT         2814 a         1905 c         1682 g         3016 t
ORIGIN      
        1 ccctcgttct cattaaatta cccataaatt tggaaaaaat cagacgcaag ttgtatttta
       61 gccttggatt aagccgtctg gatcaagttc aagtaaggcg tgagcaaagt agaaatgata
      121 gtctgcttgg aatttctcaa ataattgagc cccttctttt tggtacataa ctaatggatc
      181 ttgttgtcca tatgctcgca agtggatacc ttcgcgtaat tgtaccattg cgtccagatg
      241 cataacccac atttggtcca ttaaattcaa atagacttct cgttctattg cagcaatcgt
      301 ctcagctggg aatttattgc gttctttttt atgccaagat acgatttctt ctaccacttc
      361 tctcggatcc atcagcgtta cttgatcaaa agaaataggg aatttcgtgc cgccgagcaa
      421 ttctttttga cgtgaataat aaatttctaa ctcttcttcc ggaatatcac ttggatggat
      481 aaatgaatat tcggcaactt cacgtagaat tttttcggaa gagactccaa gtttatttct
      541 ttctaataat aaatcgcgtt ctttatatac cattttgcgt tgtaaatcga ttacttcatc
      601 gtaggaaagc aaatctttac gaatatcgta gtttgctcct tctaggcgtt tttgtgcatc
      661 cacaacgaca gcatgaattt tccttgaatt aactggtttc ccatcacgtg gtgctttgcg
      721 tttaagtttc gtggaaagtt tctcccagct cttactttca aattgttcta ataaatcatc
      781 ttctaaagaa atcataaact tactgaaacc agggtcaccc cgtcgtccag aacgtcccat
      841 tagctgtaga tctatccgac ggctctcatg gcgctccgtt ccaattacag ctagtccgcc
      901 aagcttatgt acatctggat ccagcttgat atctgtcccc cgaccagcca tgttcgttgc
      961 taaagttacc attccgcgtt tcccagcttt ggcaattatt tccgcttctt gggcatggtt
     1021 tttcgcattt aatacttggt ggggaattcc agcagcgtct aataagccac tgatccattc
     1081 attactttta atagaagaag ttcctattaa agttggctgt cctttttcat agcgccatga
     1141 tacttcatac acaatcgcac gacctttttc ctttttcgta tagaaaatat catcttgcat
     1201 atcttcccga tttacacgta aattggtggg gattactacg acatccatgt tataaatttg
     1261 acggaattct tcttcttcgg ttttagccgt tcctgtcatt ccagaaattt tcttatacat
     1321 ccggaagtag ttttgaattg taattgttgc tagcgtacgt gattcttctt taacttccac
     1381 gccctctttt gcttcgattg cctgatggag tccgtcatta aagcgccggc ctggaagcgc
     1441 acgaccagta tgtggatcga taattaatac ttcatcatca agcaccacat aatctttatc
     1501 tttatgcatc aagaaatgag ctcgcattaa aagcatcgta attctaagtt ctgactgcgc
     1561 ctctgcggaa taaagtgatt cgacacccca aaacttctgg gctttctcaa ttccagcatc
     1621 attcaaccaa acaaagcgtt tatgttcttc catctcataa tcatctttca tcatcttctt
     1681 cacaagctta ttcgctgtat gataaaggga caaatcttct tctttacggt cagaaatcag
     1741 taggggcgtt ctcgcttcat ctattaaaat tgaatctgct tcatctatta aaacaaaatc
     1801 aagtccactt tgtactttat cttctttttg gcgtaccata ttgtcgcgta agtaatcaaa
     1861 accaaattca gaagccgttc cataaataac atctgctgta taaatggcct ttttttgggc
     1921 tatgtctaaa ccagattcat ttaaagcaac ggaaacacca agatattcca gcacttgtcc
     1981 aatttcttcc cggtcacgtc tagctaaata ctcattggca gtcacaaggt gtacacgatt
     2041 accacgcatt acttctataa acataacaaa taacgacatc aatgttttac cttcgccggt
     2101 tttcatttct gccactttgc catcgccgag aacgagcgct cctattaatt gcactacaac
     2161 cgcatccaaa ccaataattc ggctagctgc ttctctcgcc aaagcaaaaa tattaatttt
     2221 atctcgatca gtcatcggtt ttgtcttaaa cttctcgcgc caaaaattag tttgttcaca
     2281 aagttcagcc tgatccatat ttttatataa gccctctttt tttacaattt gacgggctat
     2341 ttctcgatac tgtttcacta tttttcgatc atcataattt tgtctcatta tataacatcc
     2401 tccatacctt ctattataga ataccataaa ctcatctggc aattcatttc gagtcacgaa
     2461 gaacggaaaa actgccgatt tttatattac aaatgtatta agtttttcta ttaacaaaaa
     2521 acaataggtt tcccatagcg aaagttgttg attaacgttc acatcccact tacactataa
     2581 aggtttaccc agcagtacat ctcaagccct aagaatacac gttcgctttt caactgttac
     2641 aaaattatta caaatagttg gtatagtcct ctatagcctt tggagctatt atctcatcat
     2701 ttgtttttta ggtgaaaact gggtaaactt agtattaatc aatataaaat taattctcaa
     2761 atacttaatt acgtactggg attttctgaa aaaagagagg agttttatga atatgaaaaa
     2821 agcaactatc gcggctacag ctgggattgc ggtaacagca tttgctgctc caacaatcgc
     2881 atccgcaagc actgtagtag tcgaagctgg tgatactctt tggggtatcg cacaaagtaa
     2941 agggactact gttgacgcaa ttaaaaaagc aaacaattta acaacagata aaatcgtacc
     3001 aggtcaaaaa ttacaagtaa atgaggttgc tgctgctgaa aaaacagaga aatctgttag
     3061 cgcaacttgg ttaaacgttc gtagtggcgc tggtgttgat aacagtatta ttacgtcaat
     3121 caaaggcgga acaaaagtaa ctgttgaatc aaccgaatct aatggctgga acaaaattac
     3181 ttacaacgac ggggaaactg gtttcgttaa cggtaaatac ttaactgaca aagtagcaag
     3241 cactcctgtt gcaccaacac aagaagtgaa aaaagaaact actactcaac aagctgcacc
     3301 tgctgcagaa acaaaaactg aagtaaaaca aactacacaa gcaactacac ctgcacctaa
     3361 agtagcagaa acgaaagaaa ctccagtggt agatcaaaat gctactacac acgctgttaa
     3421 aagcggtgac actatttggg ctttatccgt aaaatacggt gtttccgttc aagacattat
     3481 gtcatggaat aatttatctt cttcttctat ttatgtaggt caaaaacttg ctattaaaca
     3541 aacagccaac acagctactc caaaagcaga agtgaaaaaa gaagctccag cagctgaaaa
     3601 acaagctgca ccagtagtta aagaaaatac taacactaac acaaatacta ctacagagaa
     3661 aaaagaaaca acacaacaac aaacagcacc taaagcacca acagaagctg caaaaccagc
     3721 tcccgcacca tctacaaaca caaatgctaa taaaacgaat acgaatacaa acaatactaa
     3781 tacaagtaca ccatctaaaa ataccaatac taatacaaac tccaatacga atgctaatca
     3841 aggttcttct aacaataaca gcaattcaag tgcaagtgcc attattgctg aagctcaaaa
     3901 acaccttgga aaagcttatt catggggtgg taacggacca actacatttg attgctctgg
     3961 ttacactaaa tatgtatttg ctaaagcggg aatctccctt ccacgtactt ctggcgcaca
     4021 atacgctagc actacaagaa tctctgaatc tcaagcaaaa cctggtgatt tagtattctt
     4081 tgactatggt agcggaattt ctcacgttgg tatctacgtt ggtaatggtc aaatgattaa
     4141 cgcgcaagac aatggcgtta aatacgataa catccacggc tctggctggg gtaaatatct
     4201 agttggcttc ggtcgcgtat aattaataac ttaaagtaac ctgtggagca agcagttcgc
     4261 ttcacaggtt ttttgttgga aattttatct taatgaaaga cggtgcatga tgaagaatct
     4321 agtaaaagta aaagtttttc ctaagttcac aaaaggctat aaggaaggtt atccccttat
     4381 tcttaaagag cgtatggaaa aatggccaaa agaattacaa gaaggcgacg tattagaatt
     4441 aacagatacg aatggtcaat ttattgcaag aggctaccac ggagaacaaa acaaaggcag
     4501 cggctggctt ttcacttggg acaagaaaca gcaactcgat gaagactttt taacgaacct
     4561 aattacgaca gcaatcgaaa aacgtcaatt tctatttgca gatgactcta ctactgcttt
     4621 tcggattttt aatggcgaag gagatggact tggtggtttc actgttgatt tttatgatgg
     4681 ttatctcgta attcaatggt acagtctagg catctacgct ttccaaaaaa tgattattga
     4741 tattttctta tcttttccag aaataaaagg tatttatgaa aaaagacgtt ttcaagaaga
     4801 tacaaaagac gatttcgtcg ccggtcaaaa agcaactttc ccacttatta ttaaagaaaa
     4861 tggcattaat tatgcaactt atttagatga tggttggatg acaggtatct ttctagatca
     4921 acgggatgtg cggagaagaa ttagtgagga ttattctgtt tcaaaaaatg tcttaaatac
     4981 attttcgtat acaggggcat tctcggtagc agctttattt ggtggcgcga gtaaaacgac
     5041 aagcgtagat gtggctggtc gttcgctcag caagacaaaa gaacaattag aagtaaatgg
     5101 tcttgatcca aacgagcaag cgattatcgt agaagatgtt ttccattatt ttaaatatgc
     5161 agcgcgcaaa caattaactt ttgatttagt tgttgttgat cccccaagct ttgcacgcac
     5221 aaaaaaagta actttccgag cggcgaaaga ttaccctgct atgcttcgtg aaatcattga
     5281 catcactgct ccaaacggca ccatcattgc ttcaacaaat tatgcaggat tcggtatgaa
     5341 agcatttaaa aaattaattg cggaggcctt ccaaacaagc gaccgtactt ataaaattgt
     5401 tgaaactcat tccttacccg cagatttcac ggtaaataaa aactttcctg aggggaatta
     5461 tttaaaagtg ctctttctta ctttagatat ctaaaaaaca gcgaccgagt gcggtcgctg
     5521 ttttttattt atttttcact ggttggtttg gcaaaaagct ttcaaaccat ctatataagt
     5581 catcttcttc cgcttcgttt acattgtgac cgataaaata acgatgcttc tccacgtgac
     5641 aacccatttt ctcgaaaagt cgggcgatgt catctgcttc agaaatttgg ataacagcat
     5701 cttctatacc gtgaccgata aaaattcgct tgtctttcaa cattaagtta gcgggtcttt
     5761 cttccatata atacggcaaa cgcccgctta acaaggctgc tgctttatat tgaccaccat
     5821 agctttgcat aatggatatt gttagaactg cgccttgatc aaatcctgca agaaaaactt
     5881 gttctttatc aattgaaatg taatccgtac aaattttatc aataaattgt gcgacacgca
     5941 ggcttatata atctacctct tgcgggttgg gatcaccttc tgtcaccata tgataaaaac
     6001 cgtaagccgg accatattct acgtctccac gcatggaaac aacaacgaaa cgatccatta
     6061 ataattctag tcgtcccgcc atttctagct cgtccccacc aaaaccatga agagcaaaaa
     6121 tcactggaaa agtatcttca tcttttctac caattggttc gtaaatatca taagcaaaca
     6181 ttctcattct ttacaccagc cctcaatcta acagtttttt tagtacttct gcttcttcat
     6241 cagttagtgt aatccctttt cccattttct catgattttc tgaccagtcg cggatatcgt
     6301 atttaggtgg gcggccgttc cagctgattt tgtttaattc cttccgccaa ccacgcgcat
     6361 tttcagataa tacgccaatt tcttcgatga tttcatattc aatattcgcc aaaataatcc
     6421 ttatcctttc tgattctata tctaccatac tatcaaatat ttaccccaaa tcacatcgaa
     6481 acaatcacaa attcaaaaaa tgcacccttc ccactagaat ttttgatttg attgcgttac
     6541 gattgagaag gaataaaggg ttggaggtgc ttagttatgt cgactgaaac aacagattat
     6601 ttgctagaaa catgcttaat ggcaggcaaa ataatgatgg aaagtggcgc tgaaatgtat
     6661 cgcgtggaag atacaatgaa ccgcattgca accatcgcta gtaataaaaa agggattagt
     6721 ttcgtgacgc caactgggct ttttatgtca cttgaaggtg agcgtaatgt acaattacag
     6781 caaattccca caagaaccat taatttagaa aaagtatcta tggtcaatga attttccagg
     6841 gatttcgcgg aaaagagaat ttccttaaaa gaattacata caaagctcgt taatttagat
     6901 aaagatgttc gctactttcc tatttggttg cagattattg cggcatcact cgttagtgga
     6961 tcgttgatgg ttatttttgg cgggggttgg tttgatttta ttccgacttg tatcattggc
     7021 gctattggtt ttattatttt ttactacacg cagattttta tgaaggtgaa gtttctagca
     7081 gaatttttag cttcattaag tgtcgggctc ttagctgttt tgacgatttc gattggttgg
     7141 ggtattaatc tggacacgat gattatcggt ggcgtgatgc cgcttgttcc cggggtgccg
     7201 attacgaatg cggttcggga tttgattgct gggcatttgc ttagtggaat ggcacgtgga
     7261 acagaagcgc tacttacttc ttgtgcaata ggaattggaa tcgcggttgt tttccgcttt
     7321 ttcttataaa ggaggcgcta taatggattt agtttggact attattattc aattagtgct
     7381 aagttacgtt gcgacggtga cgtttgcgat tattacaaac gttccgaaaa gagcgttgaa
     7441 tgcttgtggt attaccggaa catttggctg gatggcttat tggactttaa tgcaaatgga
     7501 ctctggaaca ggcgcatcct ctctagcagg ggctttcgtc gtcgctgtac tcagtcactt
     7561 ttttgcgaaa tataagaaat tgccaattac gatttttaat gttccgggaa ttgtcccgct
     7621 cgttcctggg ggacttgctt accaagctgt gcgtaatttt gtattaggtg attatacgga
     7681 agcaattggc ttttctgtgc aagtaacagt cgttgctggc gcgattgccg ctggattaat
     7741 gttatcagag gttttcaatc atagtattag aacattccgt gagcgtaaag aacgtatttg
     7801 aaaaaaacca atctctaata gagattggtt tttttcaaat acacggcttc tcactttatg
     7861 gcgcaggaat cattactcca taaacaaata tctgatacgt aaccactaca ttttctccag
     7921 taagtgtccc ttcatggttg gctggtatac ttcggtagtt ttcccacttc tcaatcccgc
     7981 tactactaaa gtcaggattt tgcgaaatca cataggggat ttcattgcct ttgtcatcta
     8041 ttatattgaa ggtcattctt tctggtaagg aatacgtttc tccttcttta gcagaaagaa
     8101 caatatcaga tactgcttct ccttggctat agatttgttg attataattt aatctcatat
     8161 ggtattggtc taaattagga taaacaggta ctaaatcacc atttttatag gttgttaaat
     8221 ccgttaaaac aaatggattt ccattgttat caacaaactt aattgttatg gtaacatctt
     8281 gtgcttcttt cgtataaata taagttactt gcgtggcttg atttgtgaac gttccattcg
     8341 cattgttcgg tagttttgtt gtatctaaaa cataaccatc aatttgtaat ttgtatttat
     8401 ctgttgaagc atcgtaaggt tcgccaacat ttccgctaat tgtttgtggc tcgtggattg
     8461 gttttccatc ttgatcgagg tatctaacag ttacagtagc tacggacact ttttgataaa
     8521 cataagtaac gacttgtgct ttttctgtaa aagtcccggt tgcttctcct ttgacttctt
     8581 tccacgtata gccctcgata tttttcatag aagtctgata tggtttgccg atgtcgcctt
     8641 ctaatgtttc agtggccgca actgaatttc cttgttcgtc ttgatagttt accgttacaa
     8701 tccctttttc aaccgggggc gctgtattat ttttacttgt atgtatatat cctacgtatg
     8761 tataccctgc aattgattcg ggttgtttcg tttcttttgt tccttttacg acggtttgag
     8821 attcttgggt ttttaagtta ctattctctg ttgcttgaac aatcgaccca actaacaaac
     8881 tactaccgcc aaggacaaga agaaatacta acagctgctt agcgtgtctt tttttcaatg
     8941 taagaagccc aatgccactt cctaataaaa taaaccctag aatgactaaa taaatatttg
     9001 ggccaacatc tccagctttt aatagtgttc cattttgatc tttattattg tcagaagtat
     9061 tatctgtatt tgtagttggt cctgaagtat ttttttgata cacaaaggaa tagttttcat
     9121 aatcatttgt aagtgtctcg tttggcttcc ctttgataat actatttttt tgtgtttccg
     9181 ttaatgtgct gatatcaatg tatttatacg tgacattgct tgtatccgtt tcagcagcat
     9241 caacttgcga atttccaaaa aggaaacccg tacaaaataa catcactgcg aataagcaaa
     9301 gaatgtattt tttcttcata gtgcaatccc tcccccatat aattaaattc tcattttaac
     9361 tgctcactct tcctatcaaa aagagagcaa aactagcgct taattaagct aaacaat
//
LOCUS       DASDYO010000118         9412 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.118, whole genome shotgun sequence.
ACCESSION   DASDYO010000118 DASDYO010000000
VERSION     DASDYO010000118.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9412)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9412)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9412
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.118"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            229..924
                     /locus_tag="U0290_002416"
     CDS             229..924
                     /locus_tag="U0290_002416"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465689.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2302451.1"
                     /translation="MNTLEKRQHEILTNPLHFCKKSGDFAKHSMSIKLSKNELFDVDF
                     VTGIYFVEKGIVMKGTQIDDYIGYDQLLKPGDVCNFSSFMSSDLKRNIGAQLLSPSSS
                     VITAVDRDFFIFMVEKHVSVEEFMLYQAKKEIMILQRRCLLNTLKVKDRVKHLIAAIG
                     YEYGISNGDNIQIPQELSTTFLSKFMGITREYLSLTLSELKKEDYLLNTKIPVVINVE
                     KLFNEIPYESLIL"
     gene            994..1872
                     /locus_tag="U0290_002417"
     CDS             994..1872
                     /locus_tag="U0290_002417"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465688.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302452.1"
                     /translation="MSEYLEIPELNKAFPFRSFINEGEVLVYPHWHKEIEIIYALKGS
                     LNLGVNDMPIQLKEGEIQVINGGDVHYFLASPSSERIVIQFDLSLFQEEMQMDGQMQT
                     LREMLTEMAHLSREWPEETVAKMQSLIMNIHSESSGEKPGKHYILKADLLAIIGLIYR
                     EIPQIKTQPDSVISEDAVLKSQETLHKLDQIFSYVEKHYQEPVSLQEVADYTGFSTYY
                     FTKFFKRNTGMTFVTFLNDYRLNKAKWMLLNEAFPVTEVAELAGFSSVKTFHHAFKRA
                     MGVAPLKYRKTIYGNN"
     gene            1947..3023
                     /locus_tag="U0290_002418"
     CDS             1947..3023
                     /locus_tag="U0290_002418"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465687.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2302453.1"
                     /translation="MTLKVGIIGCGGIANGKHMPSLLKAEKAEMVAFCDIVLEKAEAA
                     AKEFGSENASVYTSYIELLQDKSIDVIHVCTPNISHAEISIAAMEAGKHVMCEKPMAK
                     TTEEAKSMIEAANRTGKKLTIGYQNRFRKDSDYLHQVCENGELGDIYYAKAKAIRRRA
                     VPTWGVFLDEEAQGGGPLIDIGTHALDLTLWMMDNYKPKYVVGNSYHKLAKKENAANA
                     WGSWDPNKFTVEDSAFGFITMENGATIVLEASWALNTLDVGEARTSLSGTEGGADMED
                     GLRINGEAHSQMYEKKIQLEAGGVDFYDGTGDDPALIEAEQWLEAIEKNTDPVVKPEQ
                     ALVVTQILEAIYESSKTGQPVYFN"
     gene            3039..3779
                     /locus_tag="U0290_002419"
     CDS             3039..3779
                     /locus_tag="U0290_002419"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465686.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEM2302454.1"
                     /translation="MKAKIALQLWSVKEACEDDFFGTLEKVAEMGYDGVEFAGYYGKS
                     ASEIKAKLAELGLEVAGSHISKEQLEADLENVILFERELGNEYIICPYADFKTKQEWL
                     EFGGRLREITTTIQQAGMHFGYHNHAHELDKLDDEIILDSLLKNVPEMVAELDTYWIE
                     YAGIGVIPFIEKYRNRVPLIHIKDKSRANKESTIIGEGVLDVPGFVKTALQSGTTWLI
                     IEQEAFTQDPLTSVAKGYTYLANVLEEN"
     gene            3781..4503
                     /locus_tag="U0290_002420"
     CDS             3781..4503
                     /locus_tag="U0290_002420"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465685.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="trehalose utilization protein ThuA"
                     /protein_id="HEM2302455.1"
                     /translation="MTRVTVWNEFLHEKEDDAVLAIYPNGIHGQIASFLEKAGIEAGT
                     ATLEEPEHGLTEEVLANTDVLIWWGHMGHDRVEDRIVDRVQKRVLEGMGLVVLHSGHM
                     SKIFMRLMGTSCDLKWREANERERLWVVDPTHPIAKGIGEFIELDEEEMYGEHFDIPT
                     PDELIFLGWFEGGEVFRSGITYKRGNGRIFYFQPGHESYPTYHHPDIQQVIINGVHWC
                     AEGRKNYPAYGNHQPLEKIGRK"
     gene            4506..5474
                     /locus_tag="U0290_002421"
     CDS             4506..5474
                     /locus_tag="U0290_002421"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465684.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar phosphate isomerase/epimerase"
                     /protein_id="HEM2302456.1"
                     /translation="MKLGVFTPLFANLSLDEMLDKVKAAGLDAVEIGTGGNPGNHHCP
                     TDELLASEAARKEYLEKFTSRGLTISAFSCHDNPISPNKEEAAASDEILRKSIKLASL
                     MNVPVVNTFSGTAGDSDDAKAPNWPVIPWPTVYSDIKTWQWETKLIPYWKEIGELAAA
                     SGVKIGIELHGGFLCHTPYTILKLREETNDAIGVNLDPSHLWWQGIDPVGAIKILGKA
                     GAIHHFHAKDTYLDQDNINMYGLTDMQPYGDVQTRSWTFRSVGCGHSLTEWSDIMSAL
                     RTYGYDYVVSIEHEDPLMSIDEGFDRAVTNLQSILIKDKPLDMWWA"
     gene            5497..6546
                     /locus_tag="U0290_002422"
     CDS             5497..6546
                     /locus_tag="U0290_002422"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465683.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Gfo/Idh/MocA family oxidoreductase"
                     /protein_id="HEM2302457.1"
                     /translation="MKKYQLVIIGYGGMGSYHVTLASAANNLEVHGVFDILAEKREAA
                     AQKGLKIYESFEAVLADEKVDAVLIATPNDSHKELAITALEAGKHVVCEKPVTMTSED
                     LLAIMDVAKRVNKHFMVHQNRRWDEDFLIIKEMFEQKTIGEMFHLESRVHGANGIPGD
                     WRHLKAHGGGMVLDWGVHLLDQLLFLVDSNVKSVSANLSFALGDEVDDGFVTFITFEN
                     GITAQIEVGTTNFIKLPRWYVKGTEGTGIIHDWDLSGEIVKPTALAKTSEPTPIKAGQ
                     GLTKTMAPPSEEATNTLSLPAPAKLAPSFYNNFVDVLNNTSEPIVQNEEVYQVLKLIE
                     AIFEAAETNRTIHSI"
     gene            6640..6825
                     /locus_tag="U0290_002423"
     CDS             6640..6825
                     /locus_tag="U0290_002423"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465682.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CsbD family protein"
                     /protein_id="HEM2302458.1"
                     /translation="MSEDKGMKDKAKGLKDKVVGDAKDKFGKATDDKGKQVEGKAQKA
                     KGEVEDKTGDAKKKLSE"
     gene            6956..8857
                     /locus_tag="U0290_002424"
     CDS             6956..8857
                     /locus_tag="U0290_002424"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465681.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2302459.1"
                     /translation="MTKKVLPKEASEFTKKVNEKVKKALPFENTKDFEDAKKGFIGTW
                     DHVKVDTEDGHAVWDLDDYKFIEGEAPDSVNPSLWRIAQLNMTNGLFKVTDRVYQVRG
                     FDMSNTTIMEGDTGLVITDTLMSVETARAALELYFEHRPKKPIKAIIYTHSHADHYGG
                     VAGLISKEDVTSGKVALIGPEGFMEAAVSENIFAGNAMIRRAEFMYGSRLSRGELGQV
                     DAGLGKTASKGHMSLLAPNDTITFDHEKRVVDGIEVEFLMAPNTEAPSEHMMYFPQFK
                     LLNIAEDAVHNLHNILTLRGAQIRDAYEWWKDIDKAIRAFGDKYEVCIGQHHWPTWGN
                     EEINDMLIHQRDAYKYMHDQTLHFINKGLTAIEVAEAVKFPPELEEKWYLRGYYGTLN
                     HDVKAIYQFYLGWYNGNPADLYPLPPEDVAKKYVEFMGGVDEVVKKARVSYEAGEYRW
                     VAEVVKHAVFADGENGEARALLADALEQLGYQSESGPWRNVFLAGADELRNSVPDEVI
                     SGVTLDIVEGMPFNLILDYMGIRLNGERSIGKRISMNWKLTDVDENYHLLVNNSVLIY
                     REGEVDDKADLTLTTTRDTFNHIFGGVKSFEAAFADQTAKLEGDAKKFGEFASLLDEF
                     NPVFNIVTP"
     gene            complement(8911..9252)
                     /locus_tag="U0290_002425"
     CDS             complement(8911..9252)
                     /locus_tag="U0290_002425"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465680.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YxeA family protein"
                     /protein_id="HEM2302460.1"
                     /translation="MFTKKRGLILLAAVLLTVCAIWEYAMPTDAAVKSYYVKVEDAGK
                     PVQKNQFKGFKYVSNVYDDKGKQKQLTFYSEKELTKNEQFKVLVGENKMVVNYKKIKN
                     VPDKIKYLAEK"
BASE COUNT         3145 a         1505 c         2056 g         2706 t
ORIGIN      
        1 tttttacgtt aaaaaaggtg gaaaagttaa aatattacct aaaaaaagca tagaaaaaat
       61 gtcacaaaaa gtacttattt agacatatta tgcccaaaaa aagttgattt taatgaacaa
      121 atagtgaaaa agttcttttt ttatgatagt aacgttattt tatttagctt attccttctc
      181 tagggtgttt tcattgtgtg atattatact ttagaggagg aatttgcaat gaacacatta
      241 gaaaaacgac aacatgaaat tttgaccaat ccacttcatt tttgtaagaa gtctggagat
      301 tttgctaagc atagtatgag tattaaactt tctaaaaatg aactgtttga tgttgatttt
      361 gttacaggta tctactttgt tgaaaagggt attgttatga aaggaacaca aatagatgac
      421 tatattgggt acgatcaatt gctaaaacct ggagatgtct gtaatttttc atcttttatg
      481 tcttctgatt taaaacgcaa tattggtgct caattactct cgccaagttc tagcgtcatc
      541 acggcagtag atagagattt tttcattttt atggtagaaa agcatgttag tgtagaagaa
      601 tttatgcttt atcaagcgaa aaaagaaatt atgatactgc aacgtcgctg tttgcttaat
      661 acgcttaaag tgaaagatcg cgtaaaacac ttgattgctg caattggtta tgaatatggt
      721 atttccaatg gagataacat tcaaatcccg caagaattat ctactacatt tttatctaaa
      781 ttcatgggta ttacaagaga gtatcttagc ttaactctaa gtgaactaaa aaaagaagat
      841 tacctattaa atactaaaat acctgttgtt ataaatgtag aaaaactttt taatgaaatt
      901 ccctatgaat cattaatttt ataaacttaa gaagatagtt taacggctgt cttctttttt
      961 atgctaaaat gaaagaaaaa aaggagtttc actatgagcg aatacttgga aattccagaa
     1021 ttaaataaag cttttccttt tcgttcgttt attaatgaag gggaagttct tgtttatcca
     1081 cactggcaca aagagattga aattatttat gcgctaaaag gtagccttaa tcttggcgtt
     1141 aatgatatgc caattcaatt aaaagaagga gaaattcaag taataaatgg cggagatgtg
     1201 cattattttt tagcttcgcc gagtagtgag cgcatcgtta tccaatttga tttaagttta
     1261 tttcaagaag aaatgcaaat ggatggccaa atgcaaacgt tgcgcgaaat gcttacagaa
     1321 atggcacatt tgagcaggga atggccagaa gagacggttg ctaaaatgca atctttaatt
     1381 atgaatatcc attctgagtc aagcggggaa aagcctggga agcattatat tctaaaagca
     1441 gacctactag cgattatcgg cttgatatac cgggaaattc ctcaaatcaa aactcaaccc
     1501 gatagtgtga tttcagaaga tgcagtctta aaatctcaag aaacattaca taaattagat
     1561 caaatttttt cctatgtcga gaaacactat caagaaccgg tcagcttaca agaagtagct
     1621 gattacactg gatttagcac gtactatttc acaaaatttt tcaagcgaaa tactggtatg
     1681 acgtttgtga cttttttaaa tgattaccgc ctgaataaag caaaatggat gttgttaaat
     1741 gaagctttcc ctgttacaga agtggccgaa ctagcaggat ttagtagtgt aaaaaccttt
     1801 catcatgcct ttaaacgagc aatgggtgta gcaccattaa aatacagaaa gacaatatac
     1861 gggaataatt aagcaataaa ataggaagat ttacctctag tagttttgta tgatgtaact
     1921 atcaaaacta ttggaggttt tttattatga cattaaaagt tggaattata ggttgtggag
     1981 gcattgcaaa cgggaagcat atgccaagtt tattaaaagc tgagaaagca gaaatggttg
     2041 ctttttgcga tatcgtttta gaaaaagcgg aagccgcagc aaaagaattt ggtagtgaaa
     2101 atgcaagcgt atacacaagc tatatagaat tactccaaga taaatccatc gatgtcatcc
     2161 atgtttgtac accaaatatt tctcatgcag aaatttctat tgcggctatg gaagctggaa
     2221 agcatgttat gtgcgagaaa ccaatggcaa aaacaaccga agaagcgaaa agcatgattg
     2281 aagctgctaa tcgtacagga aaaaaactaa caattggtta ccaaaataga ttccgcaaag
     2341 actcggatta cttgcaccaa gtttgcgaga acggcgaact aggcgatatc tattatgcaa
     2401 aagcaaaagc gattcgtcgc cgagctgtac caacttgggg tgtgttttta gatgaagaag
     2461 cgcagggtgg cggaccactt attgatattg gaacacatgc gcttgattta acgctttgga
     2521 tgatggacaa ttataaaccg aaatatgtag taggaaacag ttatcataaa cttgccaaaa
     2581 aagaaaatgc agcaaatgca tggggctcat gggatccaaa taaatttact gtagaagatt
     2641 ccgcgtttgg ttttatcaca atggaaaacg gcgcgacgat agtattagaa gcaagttggg
     2701 cgcttaacac actcgatgtc ggtgaagcaa gaacatctct atcgggaaca gaaggcggcg
     2761 cagatatgga agacggttta cgaattaacg gcgaagcgca cagccaaatg tatgaaaaga
     2821 aaattcaatt agaagcaggc ggcgttgatt tttatgatgg aactggtgat gacccagcgt
     2881 taatcgaggc agaacaatgg ttagaagcaa ttgaaaaaaa tacagatcct gttgtaaaac
     2941 cagaacaagc acttgttgta acacaaatct tagaagctat ttatgaatca tcgaaaacag
     3001 gacaaccagt ttattttaat taaggaggaa gtgcctttat gaaagcaaaa attgcgttac
     3061 agttgtggag tgttaaggaa gcttgtgaag atgatttctt tggaacgtta gaaaaagtgg
     3121 cggaaatggg ttatgacggt gtggagtttg ctggttatta cggcaaatcc gccagtgaaa
     3181 ttaaagcgaa attggctgaa ctcggactag aagtagcagg atctcatatt agtaaagaac
     3241 agcttgaagc agacttagaa aatgtcattt tgttcgaacg cgaattggga aatgaatata
     3301 ttatttgccc atatgcagat tttaaaacga agcaagaatg gcttgaattc ggcggcagac
     3361 ttcgtgaaat tacaacaact attcaacaag ctgggatgca ttttggttat cataatcatg
     3421 ctcacgaatt agataaatta gatgacgaaa ttattttgga cagtttactt aaaaatgtac
     3481 cagagatggt tgcagaatta gacacttact ggattgagta tgcgggaatt ggggttattc
     3541 cttttatcga aaaatatcgt aaccgggtac cactaattca tattaaagat aaatcgagag
     3601 caaacaagga aagcactatt atcggtgaag gtgttttgga tgtgcctggt tttgttaaaa
     3661 cggcgcttca atctggaaca acctggctga ttattgaaca agaagcattt acgcaagatc
     3721 cgctaacaag tgtggccaaa ggttatacgt atttagcgaa tgtattggag gagaactaat
     3781 atgacacgtg taacagtatg gaatgaattt ttacatgaaa aagaagatga tgctgtgttg
     3841 gctatttatc cgaacggaat tcatgggcaa atcgctagct ttctagaaaa agcaggcatt
     3901 gaggcaggca cagctacttt agaagaacca gaacatggcc ttactgaaga agtattagcg
     3961 aatacggatg tactgatttg gtggggacac atggggcatg accgcgtaga agatagaatt
     4021 gtcgatcgtg tgcaaaaacg cgtgttagaa ggcatgggac ttgtcgtact acattctggt
     4081 catatgtcga aaatctttat gcgcctaatg ggaacaagct gtgatttaaa atggcgtgaa
     4141 gcaaatgaaa gagagcgcct ttgggtagtt gacccgacgc atccgattgc aaaagggatt
     4201 ggtgaattta tcgagttgga cgaggaagaa atgtacggcg agcattttga tatcccgaca
     4261 cctgatgaac taattttctt aggttggttt gaaggcggcg aagttttccg aagcgggatt
     4321 acctacaaac gaggaaatgg tcggattttc tacttccaac caggccatga atcctatcca
     4381 acctatcacc atccggatat tcagcaagta attattaacg gcgtacattg gtgcgcggaa
     4441 ggtcggaaga attatccggc atacggaaat caccaaccac ttgaaaaaat agggaggaaa
     4501 taaacatgaa attaggcgta tttacaccat tatttgcaaa tttatcattg gatgaaatgt
     4561 tagataaagt aaaggcggca ggacttgatg ctgtcgaaat cgggacgggc gggaaccctg
     4621 gaaatcatca ctgtccaacc gatgaacttt tagcgagtga agcagcgcgg aaggaatatt
     4681 tagaaaaatt tactagtcga ggattaacaa ttagtgcttt tagttgccac gataacccga
     4741 tttctcctaa taaagaggaa gcggctgcat ctgatgaaat tttgcgcaaa tcaatcaaac
     4801 tagcctcttt aatgaatgtt ccggttgtta atacattttc tggaacagcg ggagatagtg
     4861 acgatgccaa agcgccgaac tggccggtta ttccttggcc aactgtttat agcgatatta
     4921 aaacttggca atgggaaaca aaattaatcc cttactggaa agaaattggc gaacttgcag
     4981 cagccagtgg cgttaaaatt ggtatcgaac tgcatggtgg tttcttatgc catacgccat
     5041 ataccatttt aaaactgcgg gaagaaacaa atgatgctat cggggttaat ttagacccaa
     5101 gtcatttgtg gtggcaagga attgacccag ttggcgctat caaaatctta ggaaaagctg
     5161 gagcgattca tcatttccat gctaaagata cgtatttaga tcaagataat attaatatgt
     5221 acggtttaac ggatatgcaa ccatatggtg atgtacaaac gagaagttgg acattccgtt
     5281 cggttggttg tgggcacagt ttgacagaat ggtcggacat tatgagcgcg cttagaacat
     5341 atggttatga ttatgtagtc agcatcgagc acgaagatcc attaatgtcg attgatgaag
     5401 gattcgaccg tgctgttaca aacttacaat cgattttaat taaagataaa ccactggata
     5461 tgtggtgggc ttaacgataa gaaagggtgt cttaggatga aaaaatatca attagtaatt
     5521 attggttacg gcgggatggg aagctatcat gtaacgcttg catcggctgc taataatttg
     5581 gaagttcacg gtgtattcga cattctagca gaaaaacgtg aagccgctgc ccaaaaaggt
     5641 ttgaaaatct atgaaagttt tgaagcggtt ttagcggatg aaaaagtaga tgcagttctt
     5701 atcgcgacac cgaatgatag ccataaagaa ctggcgatta ctgcacttga agcaggcaag
     5761 catgttgttt gcgagaaacc agtgacaatg acaagcgaag atttactagc aattatggat
     5821 gtggctaaaa gagtaaataa acattttatg gtgcatcaaa atagacgttg ggacgaagat
     5881 ttcctgatta ttaaagaaat gtttgaacaa aaaacgatcg gtgaaatgtt ccacttagaa
     5941 tcacgtgtcc acggagcaaa tggtattcca ggagattggc gtcatttgaa agcacatggc
     6001 ggcgggatgg tacttgattg gggtgtgcat ctacttgacc aattgttatt cctagtagat
     6061 agtaacgtga aatctgtatc tgctaatcta agttttgcgc ttggggatga agtcgatgat
     6121 ggcttcgtca cgttcattac tttcgaaaat ggcattaccg ctcaaattga ggtaggcaca
     6181 acgaacttca ttaaattacc tcgctggtat gtcaaaggta cagaaggaac tggaattatc
     6241 cacgactggg atttaagcgg ggaaatcgtc aaaccaaccg cactcgctaa aacgtctgag
     6301 ccaacgccaa ttaaagcagg gcaagggctt acaaaaacaa tggcaccacc aagcgaagaa
     6361 gcaaccaata cattatcgct tccagcacct gccaaattag ctccatcttt ttataataat
     6421 tttgtcgatg ttttaaataa tacgagtgaa ccaatcgttc aaaatgaaga agtttatcaa
     6481 gttttaaaat tgattgaagc catatttgaa gcggctgaga caaatcgaac tatccattct
     6541 atttaaaaaa gatgttttag cttcctaaac tgtggaaaac actactatgg agataaagaa
     6601 ttcttcatta gaaaatattc taattaggag gcaatatcaa tgagcgaaga taaaggcatg
     6661 aaagacaaag caaaaggact taaagacaaa gtagtaggtg acgcaaaaga caagttcggt
     6721 aaagcaacag atgataaagg caaacaagta gaaggtaaag ctcaaaaagc taaaggcgaa
     6781 gtagaagata aaactggcga cgctaaaaag aaattatccg aataagttaa aaagagcggc
     6841 ttgaattttt caagccgctc tttttttggt ccaataatag caaaaggttt tgaataattt
     6901 tacggaggta taaaaagaaa gtatgtgaaa ataaacgtgc aggaggaaac cgataatgac
     6961 aaaaaaagtc ttaccaaaag aagcgtctga atttacaaag aaagtgaatg agaaagtaaa
     7021 aaaagcttta ccatttgaga acacgaaaga ttttgaagat gcaaagaaag gctttattgg
     7081 cacttgggat catgtaaaag ttgatacgga agatggccat gcagtttggg atttggatga
     7141 ttataagttt atcgaaggag aagcacctga ttctgttaac ccaagtttgt ggcgtatcgc
     7201 tcaacttaat atgacaaatg gtttattcaa agtaacggac cgggtttatc aagtacgcgg
     7261 ctttgatatg tcgaatacga cgattatgga aggcgatact ggccttgtca ttacagatac
     7321 attaatgtcg gttgaaactg cccgtgcggc gcttgaatta tactttgagc atcgtccgaa
     7381 aaaacctatt aaggcgatta tttatacgca ttcccatgcc gatcattacg gcggtgtagc
     7441 gggtctaatt agcaaagaag atgtaacctc tggaaaagtg gcacttattg gacctgaagg
     7501 ctttatggaa gcggcggtca gcgaaaatat ttttgctgga aatgcaatga ttcgtcgtgc
     7561 ggaatttatg tatggtagcc gtttgtcacg cggggaatta ggtcaagtgg atgcaggact
     7621 tggtaaaaca gcgtccaaag gccacatgtc cttacttgct ccaaatgata ctattacgtt
     7681 tgatcatgaa aaacgcgtgg ttgatgggat tgaagtggaa ttcttaatgg cgccgaatac
     7741 agaagctcca tcagaacata tgatgtattt cccgcaattt aaactactta atattgcaga
     7801 agatgctgtt cataacttgc ataacatttt aacattacgt ggtgcgcaaa ttcgtgacgc
     7861 ttacgagtgg tggaaagata ttgacaaagc gattcgtgcg tttggtgata aatatgaagt
     7921 ttgtatcggt caacatcact ggccaacgtg gggtaatgaa gagattaatg acatgcttat
     7981 tcaccaacgt gacgcttata aatatatgca tgaccaaacg cttcatttta ttaataaagg
     8041 attaactgcc attgaagtgg ctgaagctgt gaaattccct cctgaactag aagaaaaatg
     8101 gtatttacga ggatactacg gcacgcttaa ccatgatgtt aaagcgattt atcaatttta
     8161 tcttggttgg tataacggaa atcctgctga cctttatccg ctacctccag aagatgtggc
     8221 gaaaaaatac gtcgagttca tgggtggcgt tgatgaagta gtgaaaaaag cgcgtgtatc
     8281 ctatgaagcg ggtgaatatc gctgggttgc ggaagttgtc aaacatgcgg ttttcgcaga
     8341 cggagaaaac ggagaagcaa gagctcttct tgcagatgcg ttagaacaac ttggctatca
     8401 atctgagtcc ggaccatggc gtaatgtatt tttagccgga gcagacgaac tgagaaattc
     8461 tgtcccagat gaagttattt ctggtgttac actggatatt gttgaaggta tgccgtttaa
     8521 cttgatttta gattacatgg gtattcgttt aaatggggaa agatccatcg gtaaacgtat
     8581 ctccatgaac tggaaattaa cagatgttga tgagaattat catttacttg taaataattc
     8641 cgtacttatt tatcgtgaag gtgaagtaga cgataaagct gatttaactt taactactac
     8701 tcgtgataca tttaatcata ttttcggtgg tgtgaaaagc tttgaagcag catttgctga
     8761 ccaaacagct aaattagaag gagacgcgaa gaaatttggg gagtttgctt ccttgttaga
     8821 tgaatttaat cctgtcttca atattgttac accttaataa aaacaaaaaa cgctttgttt
     8881 agccttttat caggctataa caaagcgttt ttatttttca gctaaatatt taattttatc
     8941 tggtacgttt ttgatttttt tataattaac aaccattttg ttctcgccaa caagtacttt
     9001 gaattgctcg ttcttagtta attctttttc tgagtagaaa gttagttgtt tttgttttcc
     9061 tttgtcatca taaacattcg atacatattt gaaccctttg aattgatttt tttgaacggg
     9121 ttttcctgcg tcttctactt ttacgtaata ggatttcact gcggcgtcag ttggcatcgc
     9181 atactcccaa atcgcgcaaa cagttagaag aactgcagct aataatatta aacctctttt
     9241 tttagtaaac atttctcctt catcctttct tgatttgttt tattacatta agtttacaat
     9301 ggaatgacaa aattatcccg tttgttaact aacaaaatcc agcgttaatc ttacattttt
     9361 gtcagaaagg taacaaaagt gagtttaaaa gattgtgaag ttacaaaaca tc
//
LOCUS       DASDYO010000119         9260 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.119, whole genome shotgun sequence.
ACCESSION   DASDYO010000119 DASDYO010000000
VERSION     DASDYO010000119.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9260)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9260)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9260
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.119"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..2618
                     /locus_tag="U0290_002426"
     CDS             <1..2618
                     /locus_tag="U0290_002426"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="YhgE/Pip domain-containing protein"
                     /protein_id="HEM2302461.1"
                     /translation="IALIILPSLYAWFNIEALWDPYSNTSGIKVAVSIDDEGAEIDVP
                     GKKPQQVNVGDQLKKTLEKNKKLGWTFVSEDEAKKGVKSGKYYASIHIPKDFSEDMVS
                     VVNDNVTKPTIDYSVNEKINAIAPKMTESGATTIVNQISSEFVGTVSKAVLEEFNKAG
                     IDLENELPTIRRLKTKVFQVQDALPELKKMGAEAVKIEAKLPELKAKANQVVELNEKI
                     PELNKATENVLLVEQQLPKIDQLGQDILVLQKKIPEIKQIAESVKEVDENFGTIKKTV
                     NDAVNESGKALDVIDTAMAAIPTVEKIAQNGSGYVDKVSDFADEINKSFDTLAPAIKQ
                     NLTLMKQMADNIYQVTEAIKNGSITPEQAITELKKMEQDIDSLQQMITKQTATLESLN
                     ETLPNKPFTDLIANLKTINSQLGAQKETITKVRTELEDGAQPSEELLNQLNEQAKKVS
                     AKLDQILANYDSEIVPAIKVGLNQIQGDLKDSQKLLETLQAKIPEITQVLKDSRETLQ
                     TGQTYLKEFQERLPEIQKTLDEATKVINTKLDTIIAGINEAANFYQNDYPNVKANIKK
                     AANFIRDDLPGLEKEINQASNLIQEKMPEFEKAIKIAADLSREELPEFEKAINNAANK
                     ITDFDKNYDLQSIIKMLRNDADKDSSFIANPVKLKETSYYPIPNYGSASSPFYTALCL
                     WVGALLLISLLRVDVEVPAGIFSHYHRYFGRLLTFLSIGLMQALIVTLGNIFLLGVSI
                     AEPLLHVLFSMFISVVFMTIVYTLVSLFNNVGKGIAIILLVLQISGAGGNFPIQVSPP
                     FFQAIYPFLPFTYAVSLIRESVGGLYMPTVWIDMSVLAGFAILFITLGILLKKPLDKV
                     VPKLSEKAKRSKLIH"
     gene            2664..3311
                     /locus_tag="U0290_002427"
     CDS             2664..3311
                     /locus_tag="U0290_002427"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464178.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302462.1"
                     /translation="MANKFKTLDKMVYNLLLEKIKNGELVANEHLAEEKLAREFGVSR
                     SPIRKAIATLTAQGIVSYHENSGAVLNDCIVDSDRYVQLMETIEIFVDAAIAKAAHFG
                     YEMDLEKLYARMQEMERLSYLTDIENYYDAHHRFILCLISFAENPYQVRIVKQIFFQM
                     IHFSDGINMFKSVEIREWTNKKSNQICELLAEEETELARKTIKSMFAELTIQAYR"
     gene            complement(3321..3857)
                     /locus_tag="U0290_002428"
     CDS             complement(3321..3857)
                     /locus_tag="U0290_002428"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302463.1"
                     /translation="MNQNKITAGGLEFLVRFALPTDRLKIHDLMMDTARWLKESGSTQ
                     WSDILHGFDVHNIEQRIELGEVALFETEAGALAGAMIIRKTPSDWDTDLWEDLAIDKA
                     YYLHRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIESNETLNQMYVRYGFQ
                     FSGKKNGFYLYQKELSQK"
     gene            complement(3844..4836)
                     /locus_tag="U0290_002429"
     CDS             complement(3844..4836)
                     /locus_tag="U0290_002429"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF975 family protein"
                     /protein_id="HEM2302464.1"
                     /translation="MTISQVKQTAKESLRGNWGIAIGIFVLAWLIETVGGGLIGWIPV
                     IGWIAIFLLTGPLYTGVAWVYLAISRREQPDVAYMFSGFKQFGRTVLAYLLISIFTFL
                     WSLLLIVPGIIKTYSYSQTFFILRDNPNISALDAITESRHMMNGHKGRLFGLSLTFLL
                     WYLIPLAVAIAGTVIVAGGMATTSYTADPAEVLSALAAGATFGGLVLILASWLITLGI
                     SLYVYPYLITSIAVFYDDLYAATEGTFTEETVIVEEEVNPFGTTEADPFAEDTHPEGF
                     GPEATKEPETPVVPEAPEAPETPETPEVPETPEAPETPEAPETPEAPKDNNEPK"
     gene            5027..5236
                     /locus_tag="U0290_002430"
     CDS             5027..5236
                     /locus_tag="U0290_002430"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302465.1"
                     /translation="MAHENLRELEDQLIELRQTYQEVISETREFEDPQLQNGPINAAE
                     VRLSALRHEIAEVEKKIKKAESKTE"
     gene            5304..6011
                     /locus_tag="U0290_002431"
     CDS             5304..6011
                     /locus_tag="U0290_002431"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine/threonine protein phosphatase"
                     /protein_id="HEM2302466.1"
                     /translation="MKPIFAVGDVHGEITLLDELLENWDKEQERLLFVGDLIDRGENP
                     AAVLRRVKALADQTGAIVLKGNHEQMLLDFLENPSGKMHYYLSQGGMETIQSLIADSL
                     DKKMTPEGLAERVKEEAAELIDFIRNLPLYYEEGKYVFVHAGVDLTKKDWHDTEERDF
                     FWIREPFLFGQNKTGKVFIFGHTPVQNLHIDESSGIWVSEDKTRLDIDGGAVFGGELH
                     GIVVEEKVITKSFSVKK"
     gene            complement(6057..6620)
                     /locus_tag="U0290_002432"
     CDS             complement(6057..6620)
                     /locus_tag="U0290_002432"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF420 domain-containing protein"
                     /protein_id="HEM2302467.1"
                     /translation="MEQNKEKLTKPTSEKNYFWPIMIISFVAVVVILLLFFSPIGYQG
                     AVHFDITIFPRMNAIFNSFTFVFLVIALWAIIKKKNIKMHRGFILAAFTSTLFFLVTY
                     LTFHYLSAETSTFGGTGIIRPIYFFILITHSFLAAIVVPLALFALVWGWTMQIEKHKK
                     IVRWTMPIWLYVSLTGVLVYLFMAPYY"
     gene            6740..7156
                     /locus_tag="U0290_002433"
     CDS             6740..7156
                     /locus_tag="U0290_002433"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464184.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302468.1"
                     /translation="MSIIARELTKAEEAEIIRLKEEGEVMLQTDGTPEERIEKIAEYL
                     KQTSPDPDLAEELGYILGSLYGEAVREKYEWRWLFVSENDLEGYAITSKEHGYTFMVH
                     DYFMQVIVQNKPDNSKMLFELMVDMTGNRNDFRMIG"
     gene            7199..7828
                     /locus_tag="U0290_002434"
     CDS             7199..7828
                     /locus_tag="U0290_002434"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738330.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease III domain-containing protein"
                     /protein_id="HEM2302469.1"
                     /translation="MNVNEQKVLVLNNLVEHYGYQDWWEADNRLADWLSMILIQRTTE
                     KNAKQALANLAPYLDLDSLIEMDKAKLEELIYPAGFYKQKSIYIKALAEWFYGHGASL
                     DKFQTYSTEALRKELLGIKGVGEETADAMLLYIFERNVFIADLYARRLFTRLGFGEYT
                     TYEQMREEFMPIIENIPHKLCKEWHSVIDVHGKHFGKDKSMNESWLLES"
     gene            complement(7825..8721)
                     /locus_tag="U0290_002435"
     CDS             complement(7825..8721)
                     /locus_tag="U0290_002435"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rgg family transcriptional regulator"
                     /protein_id="HEM2302470.1"
                     /translation="MVGYGKTVRDIRTSKGIHQKDLYDNIISKSFAIEFEKGKHDITL
                     TLFEKILKRMNMDLDEFFYIHRELSVSAEKNYLCMNQERGNIYDLASLELLYSELSKH
                     NGELVEVWKAFVRSRIKLVEHLFKYHEFTVDVITPKDKCTIQKYLFSIDTWTLEELKI
                     CANSIYFFEEDLQIQFLNQVIKAIHSYKNYDRARRVLCTLLINTIEMFISRGQIASAS
                     KLIILLDSLCLYNESAFYRNISHFLKGLVKMQNNHIQEGYNQAKKAIQIMNDLRFEEI
                     AYLYEILLDQFIRIKGIDIVKS"
     gene            8955..9236
                     /locus_tag="U0290_002436"
     CDS             8955..9236
                     /locus_tag="U0290_002436"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740276.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transposase"
                     /protein_id="HEM2302471.1"
                     /translation="MAKAKYDENFKKSLVALYRRGKTKHSICQEFSVPNSTFGKWIKK
                     FNNDDNIESNEILNILQAQELKKQRALLEEELSILTEAINVFENPPIKN"
BASE COUNT         3147 a         1582 c         1891 g         2640 t
ORIGIN      
        1 taattgcatt aattattttg ccatcattat atgcttggtt taatattgaa gcactttggg
       61 atccgtattc caacacttcg gggatcaaag tggcagtttc gatagatgat gaaggcgcgg
      121 aaatagacgt accagggaaa aagccgcaac aagtgaacgt cggggaccag ctcaagaaaa
      181 cgttagaaaa aaataaaaaa ctcggttgga cttttgtaag tgaggatgaa gcgaaaaaag
      241 gcgtgaaaag tgggaaatac tacgcgtcta ttcatattcc aaaagatttt tcagaagata
      301 tggtttcggt cgtaaatgat aatgttacca aaccgacaat cgattattcc gtcaatgaaa
      361 aaatcaatgc tatcgcgcca aaaatgaccg agagtggcgc aacgacgatt gtaaatcaaa
      421 ttagttctga gtttgtcggc acagttagta aagccgtttt ggaagagttt aataaagcgg
      481 ggattgatct tgaaaatgaa ttgccaacaa ttcgtcgcct aaaaaccaag gtattccaag
      541 tgcaggatgc tttaccagaa ctgaaaaaaa tgggagcaga agcggtcaaa atagaagcca
      601 aactacccga actaaaagcc aaagcaaacc aagttgtcga gctaaatgaa aaaattcctg
      661 aactaaataa agcaacagaa aacgtcttat tagtggaaca acaactacca aaaattgacc
      721 aactcgggca agatatttta gtgctccaaa agaaaatccc ggaaatcaaa caaatcgccg
      781 aatcggtaaa agaagtagat gaaaacttcg gaacgattaa gaaaacggtc aatgacgcag
      841 tgaatgaatc gggcaaagcg cttgatgtga ttgatacagc aatggcggca attccaacgg
      901 tagaaaaaat tgctcaaaat ggcagcggct atgtggataa agtatctgat tttgcggatg
      961 aaatcaataa gtcctttgat acgttagcgc ctgctattaa acaaaactta acgctaatga
     1021 agcaaatggc ggacaacatc tatcaagtga cagaagcaat caagaatggc tcaatcacgc
     1081 cagaacaagc tattacggaa ttgaaaaaaa tggagcaaga tattgattcc ttgcagcaaa
     1141 tgattacgaa acaaacagcg acattagaaa gtttaaatga aacattgccg aataagccat
     1201 ttactgattt aattgcgaat ttaaaaacga ttaatagcca gttaggcgcg caaaaagaaa
     1261 cgattacaaa agtacgcaca gaacttgaag atggcgctca accttccgag gaacttttaa
     1321 atcaactgaa tgaacaagcg aaaaaagtta gcgcgaagtt agaccaaatt ttagcgaact
     1381 atgattctga aatcgttcca gcaattaaag tcggcttaaa ccaaattcaa ggagatttga
     1441 aagacagcca gaaactatta gaaaccctac aagcgaaaat cccagaaatt acgcaggttt
     1501 taaaagattc gagggaaaca ctacaaaccg gtcaaacata cttaaaagaa ttccaagaac
     1561 gcttaccaga aattcaaaaa acgttagatg aagcgacaaa agtaatcaac accaagctcg
     1621 acacgattat cgcaggcatt aacgaagcag ccaactttta ccaaaacgat tatccgaatg
     1681 taaaagcgaa cataaaaaaa gcggccaact tcattcgtga tgatttacca gggcttgaaa
     1741 aagaaataaa tcaagcctcc aatctcatcc aagaaaaaat gccggaattc gaaaaagcga
     1801 ttaaaattgc ggccgatctt tcgagggaag aattgccgga attcgaaaaa gccattaata
     1861 atgcagcgaa taaaattacc gatttcgata aaaattacga tttgcaaagc attattaaga
     1921 tgctcagaaa tgacgcagat aaagatagtt catttattgc caatccagtt aagttaaaag
     1981 aaacaagcta ctatccaatt ccaaattatg gttcggcaag ttcgccattt tatacagctc
     2041 tttgtttatg ggtcggtgcg ctcttgttga tttcgttatt acgtgtggat gtagaagtgc
     2101 cggcaggaat tttcagccat tatcaccgat attttggccg attgctgacc ttcctatcta
     2161 tcggattaat gcaggcgctt atcgtgacgc tcgggaatat tttcttgctc ggggtatcca
     2221 tcgcagaacc attactacat gtactattca gcatgtttat cagcgtggtg ttcatgacaa
     2281 ttgtctacac gctcgtatcg ctatttaata atgttggaaa agggattgcg attatcttgt
     2341 tagttttaca aatttcagga gcaggcggga actttccaat tcaagtttcg ccaccatttt
     2401 tccaagctat ttatcctttc ttgccattca cttatgccgt tagtttaatt cgggaaagtg
     2461 ttggggggct ttatatgcca acggtttgga tcgatatgag tgttcttgcc ggatttgcca
     2521 ttctctttat cacgctaggc attttactca aaaaaccact agacaaagta gtacccaagc
     2581 tatcagaaaa agcaaaacga agcaagctca tccattaata ttttttctgt gatataatta
     2641 cgagcgaaga gggggcagac tttgtggcaa acaaatttaa aacattagat aagatggtgt
     2701 ataatctact tcttgaaaaa atcaaaaacg gcgagttagt ggcgaatgaa catttagcag
     2761 aagaaaagtt ggctagggaa ttcggtgtta gccggtcgcc aataagaaaa gccattgcaa
     2821 cgcttactgc tcaaggtatt gttagttatc acgaaaatag cggtgctgtt ttaaatgatt
     2881 gtattgttga ttcggatcgc tatgtgcaat tgatggaaac cattgaaatt tttgttgatg
     2941 cagcaattgc gaaagcagct catttcggtt atgaaatgga tttggagaaa ttgtatgctc
     3001 gtatgcaaga gatggagcgc ctttcgtatc taactgacat agaaaattat tatgatgcac
     3061 atcatcgctt tattctttgt ttaatcagtt ttgcggaaaa tccctatcaa gtccgtatcg
     3121 tcaagcaaat tttcttccaa atgattcatt tttcagatgg aattaatatg tttaaatccg
     3181 tcgaaattag agaatggact aacaagaaaa gtaaccaaat ttgtgagttg ctcgcagaag
     3241 aggaaactga attagccagg aaaacaatta agtctatgtt tgcggaatta acgattcaag
     3301 cctacagata aaaagagctg tcacttttgt gacagctctt tttgatataa ataaaaaccg
     3361 tttttcttac cagaaaattg aaaaccatag cggacataca tttgattgag cgtctcattg
     3421 ctttcgatgc aatctaaccg aatgaaagga acggacattt cgatacctaa tttttccgca
     3481 aaataaatca tttgtttact taatgaaatt ccggaaaatg ctcgagaaac cataatccgg
     3541 tgtaaataat atgctttatc aattgccaaa tcttcccata aatccgtatc ccaatcactt
     3601 ggcgtttttc gaataatcat tgcgcccgca agtgcacccg cttccgtttc aaaaagggca
     3661 acttcaccaa gttcaatacg ttgttcgata ttatggacat caaaaccatg caaaatgtcg
     3721 ctccactggg ttgaccccga ctcttttaac cagcgagctg tatccatcat taagtcatgt
     3781 atttttagtc gatcagttgg caaagcaaag cggactagaa attccagtcc gccagccgta
     3841 attttatttt ggttcattgt tatcttttgg agcttccggt gtttcgggtg cttccggagt
     3901 ctcgggtgcc tcaggagttt caggaacttc cggcgtttct ggtgtttcag gagcctcagg
     3961 agcttctggt actacaggcg tttcgggttc ttttgttgct tctggtccga agccttctgg
     4021 atgtgtatct tcagcaaatg gatcagcttc tgttgttcca aatggattta cttcttcttc
     4081 cacgatgacc gtttcttctg taaaagtgcc ttctgttgct gcgtataaat catcgtagaa
     4141 cacagcgata gaagtgatta gataaggata aacataaagc gaaataccaa gagtaattaa
     4201 ccacgatgct aagattaaca cgagtccacc aaacgtagca ccggcagcaa gagctgaaag
     4261 tacttcagca ggatcagctg tataagatgt agtagccatt ccgccagcaa cgataaccgt
     4321 acctgcaatc gcaacagcaa gaggaattaa ataccataaa aggaatgtaa gagatagtcc
     4381 aaaaagtcta cctttgtgtc cattcatcat gtggcggctt tctgtaatag catctagcgc
     4441 agaaatattt gggttatctc gtaagataaa gaatgtttgt gaataagagt aagttttaat
     4501 aattcctggt acgattaaga gtaagctcca taagaatgtg aaaatagaga ttagtaagta
     4561 agctaagacc gtacgtccaa attgtttaaa accactaaac atataagcaa catctggttg
     4621 ttcacggcgg ctaattgcta ggtacaccca agcaacccca gtataaagtg gtccagttag
     4681 taggaatatt gcaatccaac caatgactgg gatccaacca attaatcctc caccaacagt
     4741 ttcgattagc caagcaagta caaatattcc aatggcaatt ccccagttgc cacgaagcga
     4801 ctcttttgct gtctgtttta cttgtgaaat agtcatcata gtaaaaactc ctttttcatt
     4861 tatttttaag tataatagca aaaataccta cctttaaaat agcacatttt ctaggactaa
     4921 tacagtaata agaagtgtta caaaaaaatg ctaaaaaaag gattatattt ctatttaatg
     4981 gggaaaagta aaattgtgta gtatgattaa tttggaggtg gcgcgtatgg cccatgagaa
     5041 tttaagagaa ctagaagatc aattgattga attgcgacaa acatatcaag aggtaatcag
     5101 tgaaacacga gagtttgaag acccacaact ccaaaatgga ccaatcaatg cagctgaggt
     5161 tagattaagt gcattacgtc acgaaattgc cgaagtagag aagaaaatca aaaaagcaga
     5221 aagcaaaacc gaataagaaa aaagcgtcca tttgtttatt ttgcagaggg gcgtttcttt
     5281 tacgtagatc tggaggtata agcatgaagc caatttttgc tgtaggagat gtacacggag
     5341 agattacgct tttagatgaa ttactcgaaa actgggataa agagcaagaa cggcttttgt
     5401 ttgtagggga tttgattgac cgcggcgaaa acccagctgc agtacttaga agagtgaaag
     5461 cattagccga ccaaacggga gcgattgtct taaaaggaaa tcacgaacaa atgttactag
     5521 attttctcga aaacccttct gggaaaatgc attattattt aagtcaaggc ggtatggaaa
     5581 caattcaatc cttaatcgcg gactcgcttg acaaaaaaat gacgccggag ggacttgcgg
     5641 aacgggtaaa agaagaagct gctgaactca ttgatttcat ccggaacttg ccactctatt
     5701 atgaagaagg caaatatgta tttgtacatg caggcgtaga tttgacgaaa aaagattggc
     5761 acgataccga ggagcgtgat tttttctgga ttcgcgaacc tttcttattt ggacagaata
     5821 aaaccgggaa agtctttatt ttcgggcata ccccggtaca aaatttacat attgatgaaa
     5881 gttctggtat ttgggtttcg gaagataaaa cgaggctcga tatagatggt ggcgcggttt
     5941 ttggcggaga acttcacggg attgtcgtgg aagaaaaagt catcacgaaa agtttttctg
     6001 taaaaaaata agcatcgaat gggctctttt gaagcgctca ttcgatgctt ttttgtttaa
     6061 taatacggtg ccataaataa gtaaacgagt acgccagtta agctgacata tagccaaatc
     6121 ggcatcgtcc agcgaacgat ttttttgtgt ttctcaattt gcatcgtcca gccccaaaca
     6181 agtgcaaata gcgctagtgg aacaacgatt gctgctaaga aactatgtgt aattaaaatg
     6241 aagaagtaga taggacggat aattccagtt ccgccaaatg tagaagtttc tgctgaaaga
     6301 taatggaatg ttaagtaagt tactaagaag aataatgtag atgtaaatgc tgctaaaatg
     6361 aagccacggt gcattttaat gtttttcttt tttataatcg cccaaagtgc aataactaaa
     6421 aatacaaagg taaaactatt aaagatggcg ttcattcgcg ggaagatagt aatgtcgaaa
     6481 tgcactgctc cttgataccc gattggtgag aagaagagta gtaaaatcac cacaaccgcg
     6541 acaaatgaaa taatcattat cggccaaaaa tagttttttt ctgatgtcgg ttttgtgagt
     6601 ttttctttat tttgttccat gaaaaaaata gccccctaaa tataaaaatt gctgtacttc
     6661 tttcattata catgacgaac atatcggatg cgaaagattg agcttttgag ttataatggg
     6721 tggggaaagg gtgtttctaa tgtcgattat tgcacgagaa ctaacgaaag cggaagaagc
     6781 tgaaattatc cgtttaaaag aagaaggcga agtgatgctc caaacagacg gaactccaga
     6841 agaacgcatc gagaaaattg ctgagtactt aaaacaaacc tcgccagacc ctgatttagc
     6901 agaagagctt ggttatattt taggctcttt gtacggagag gcagtgcgtg aaaagtatga
     6961 gtggcgctgg ctgtttgtct cagaaaatga tttagaaggc tacgcgatta cgtcgaaaga
     7021 gcatggctat acatttatgg tgcatgatta ttttatgcaa gtaatcgttc agaataagcc
     7081 agataatagc aaaatgctat ttgaattgat ggttgatatg actgggaatc gaaacgattt
     7141 tcggatgatt ggttaaggag aataactgtt ttttgattcc tttttgaggt gatgcaaggt
     7201 gaatgtaaac gaacaaaaag tgttagtttt aaataattta gtggagcatt atggttatca
     7261 agattggtgg gaagcggata atcgtctggc tgattggctt tcgatgatat taatccagcg
     7321 tacgacagag aaaaatgcca aacaagcatt agcgaacctt gcaccatatt tagatttaga
     7381 tagcttaatt gaaatggata aagcgaaatt ggaagaatta atctatccag cgggttttta
     7441 taaacaaaaa agtatctata ttaaagcact tgctgagtgg ttctatggtc acggagctag
     7501 tttagataag tttcagacgt attcaacgga agctttacga aaagagttgt taggcataaa
     7561 gggtgtcggg gaagaaacgg cggatgcaat gttgctgtat atttttgagc ggaatgtgtt
     7621 tatagctgat ttatatgcca gacgactatt tactaggttg ggttttggtg aatatacaac
     7681 ttatgaacaa atgcgcgagg aattcatgcc gataatcgaa aatattccac ataaactttg
     7741 taaagaatgg cactcagtca ttgatgttca cggaaaacat tttgggaaag acaaaagtat
     7801 gaatgaatct tggctgctag aaagctagct cttaacaata tctatacctt ttatcctgat
     7861 aaactgatcc aacaaaattt catataaata agcaatctct tcaaaacgga ggtcattcat
     7921 aatttgaatg gctttttttg cttgattgta tccttcttgg atatgattat tttgcatttt
     7981 tactaaccct tttaaaaaat gagagatatt tcggtaaaag gcgctttcgt tatacagaca
     8041 taaagagtct aataggatga tgagtttact agcagaagct atttgaccgc gcgaaataaa
     8101 catttcaatc gtattaatta aaagcgtaca taaaacacgt ctggcacggt cgtagttttt
     8161 ataagagtga atggccttaa tgacctggtt taaaaattga atttgtaaat cttcttcaaa
     8221 aaagtagatg gagttagcgc aaatcttaag ttcttcaagt gtccacgtat caatcgaaaa
     8281 taaatacttt tgaatcgtgc atttatcttt aggtgtaatc acgtctactg taaattcatg
     8341 atatttaaag agatgttcga ccaatttaat tcgcgaacga acaaatgctt tccagacctc
     8401 cactaattcg ccattatgtt tagaaagctc gctatataat agttccaaac ttgcaagatc
     8461 atatatattt ccgcgttctt gattcatgca taaataattt ttctcagctg atactgacaa
     8521 ttctctatgg atataaaaga actcgtccaa gtccatattc atccgtttta aaattttttc
     8581 aaataaggtt agtgtgatgt cgtgctttcc tttttcaaat tcgatagcga aggatttgga
     8641 aatgatatta tcgtataaat ctttttgatg tattccttta gaagtgcgaa tatctctcac
     8701 tgtttttcca tacccgacca ttcaagttac tccttttgtt tcataattta gatgtgggct
     8761 gcatctaaga ggtgttgcaa ggagtttaac agccatttta cttttaaatc gtagcataga
     8821 aaatttggcg gaagaagtcc tatttttagg actttatgaa aaaatgttag gaaaacttga
     8881 tatattagaa atgaaataac agatatattt gcatcttttt ttatgatatt taacaataga
     8941 aagaaggaag ttttatggct aaagcaaaat atgacgagaa tttcaaaaaa agtttggttg
     9001 ctttatatcg cagagggaaa acgaagcata gtatctgtca ggaatttagt gtccctaatt
     9061 caacttttgg aaaatggata aaaaaattta ataatgatga caatattgaa tcgaacgaaa
     9121 tcttaaatat cttgcaagcg caggaactaa aaaaacaacg ggcgctatta gaagaagaat
     9181 tatctatctt aacagaagca attaatgtct ttgaaaaccc gccaattaaa aattgaatac
     9241 tatgttcaaa gtgaaattat
//
LOCUS       DASDYO010000120         9239 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.120, whole genome shotgun sequence.
ACCESSION   DASDYO010000120 DASDYO010000000
VERSION     DASDYO010000120.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9239)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9239)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9239
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.120"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            98..1057
                     /locus_tag="U0290_002437"
     CDS             98..1057
                     /locus_tag="U0290_002437"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rhodanese-related sulfurtransferase"
                     /protein_id="HEM2302472.1"
                     /translation="MSDYQVLLYYKYTTIDDPETFAKEHLAACKEMELKGRILVATEG
                     INGTVSGTVEATNKYMDYMANDARFADMVFKIDAADAHAFKKMHVRPRAEIVSLSLEE
                     DVNPLEVTGTYLEPSEFREALLDEDTVILDARNDYEFDIGHFRGAVRPDIQNFRELPG
                     WIEDNREQLADKKIVTYCTGGIRCEKFSGWLKTAGFDDVSQLHGGIATYGKNEETKGE
                     LWDGQMYVFDERIAVPINQVNPTIVGKDYFDGTPCERYINCANPYCNKQILASIENEK
                     KYLRSCSHDCRVHPANLYTKNLSKEEFTERLQAIDETLPEMVQ"
     gene            complement(1097..2173)
                     /gene="fni"
                     /locus_tag="U0290_002438"
     CDS             complement(1097..2173)
                     /gene="fni"
                     /locus_tag="U0290_002438"
                     /EC_number="5.3.3.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type 2 isopentenyl-diphosphate Delta-isomerase"
                     /protein_id="HEM2302473.1"
                     /translation="MQKNDDLLRERRKDEHVALGVKQNEQLAPSSLEDIQLIGTSIPR
                     YNVKDIDLTTTIVGTNVPFPLYINAMTGGSRHTKKINAELAEIAREVAIPMAVGSQSA
                     ALKNSSLIDTYKIVREINPNGMILANISPEVALQEGLRAIEMLEANALQIHINPAQEL
                     VMQEGDRSFSHWLTRIEEYVKLSPVPVVVKEVGFGMTRETVKTLADIGVQTVDLAGKG
                     GTNFAQIENDRRRDQAYDFLLDWGISTGQALIDMQHQDAPKIAYLASGGIRNPLDIVK
                     ALALGADSVGMAGQIIYSLKKEGVTKTIEKLELWKEQLRGLFVLANAKNISELKTTPL
                     IISGELAKWGALREIDLVKLANRK"
     gene            complement(2202..2549)
                     /locus_tag="U0290_002439"
     CDS             complement(2202..2549)
                     /locus_tag="U0290_002439"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1033 family protein"
                     /protein_id="HEM2302474.1"
                     /translation="MTKWNVYLTKGEYEPWWFFEEWETSIQADFAFSDKEAAFLKYQE
                     LADELLRNYPNHQTKKDCLLAAWNEEEVEYCEDCEDDIQTFHGLILFSDGEVYQPTPE
                     EKETIFKPVLTFA"
     gene            2689..2970
                     /locus_tag="U0290_002440"
     CDS             2689..2970
                     /locus_tag="U0290_002440"
                     /EC_number="3.6.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acylphosphatase"
                     /protein_id="HEM2302475.1"
                     /translation="MARDTAILRVTGFVQGVGFRYTTKHVAYKYDISGTVKNLDDGSV
                     EIHAIAEEENLNKFIDAIKKGPSPGCRIEHVYIYKGAPVEERKTFDIVY"
     gene            3056..3337
                     /locus_tag="U0290_002441"
     CDS             3056..3337
                     /locus_tag="U0290_002441"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302476.1"
                     /translation="MISILQILLEPEFISLTVTFLLMLTIFSYWSAITLLKPKMVLPA
                     DAICLKLVKISLRAQIYITTPNFVINWLAITRKCSAITDDEDSFSFSNV"
     gene            3374..4201
                     /gene="yidC"
                     /locus_tag="U0290_002442"
     CDS             3374..4201
                     /gene="yidC"
                     /locus_tag="U0290_002442"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="membrane protein insertase YidC"
                     /protein_id="HEM2302477.1"
                     /translation="MKKKNIILISVLLGALLLLTGCSMDPSQNTDGFFSTYLIQPFTS
                     FIMFVAKFVGGNYGIAIIITTLLIRALIMPLNLRTAKAQMGMQSKMAVAKPEIDEIQA
                     RLKRATSKEEQATIQKEMMAVYSKYNINPMQMGCLPLLIQMPILMAFYYAIRGSSEIA
                     SHTFLWFNLGSPDMVLAIIAGLVYLAQYFVSMIGYSPEQKKQMKIIGLMSPIMILFVS
                     FTAPSALALYWAVGGLFLAGQTLLTKKLYMNKHPEIKVMEQEEKEFEQIVEEQKKEK"
     gene            complement(4238..5689)
                     /locus_tag="U0290_002443"
     CDS             complement(4238..5689)
                     /locus_tag="U0290_002443"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HAMP domain-containing protein"
                     /protein_id="HEM2302478.1"
                     /translation="MTTSPFSLKSRSLKFKWTFGASAAIFLTFFLFSYAIYQGIGQML
                     LNEEEPEVKELLLATTSTLTNQDLTDNEEIKYLFNNDKTVNRKLQDQVINLYDKDGHF
                     INKYYFSRSQDITSIDFSQYFVSGTDKFIMNKPTIDGQKMMTAQMPIVADDNTTVIGY
                     AQVVNPLTSYNRMMDRLLVTMILLGAVALFISGMLGYLLAQNFLNPLTRLARTMNDIR
                     KNGFQKRIETKTNSRDEIGELTVVFNDMMTRIETSFEQQKQFVEDASHELRTPVQIME
                     GHLKLLTRWGKDDPAVLDESLNASLTELERMKKLVQEMLDLSRAEQISQTKELQITDV
                     NATVEQVRRNFEVMYENFTFTLKEDDTDLRALIQHNHLEQILIIIMDNAVKYSGDGTE
                     VDMHVYKEQKQIHIDVRDYGEGISQEEIDKIFNRFYRVDKARSREKGGNGLGLAIAKQ
                     LVEGYLGTINAVSEPDKGTTIKITLPYIEPKSK"
     gene            complement(5686..6366)
                     /locus_tag="U0290_002444"
     CDS             complement(5686..6366)
                     /locus_tag="U0290_002444"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="response regulator transcription factor"
                     /protein_id="HEM2302479.1"
                     /translation="MNRILIVEDEKNLARFIELELQHENYETAVANDGRAGLELALNE
                     EWDAILLDLMLPHLNGVEVCRRVRQVKQTPIIMITARDSVIDRVSGLDHGADDYIVKP
                     FAIEELLARLRSLLRRVENAEQSAKQTTLQYRNLIVEKENRIVKRDEEIIDLTKREYE
                     LLLTLMENVNIVLTREVLLNKVWGYETEVETNVVDVYVRYLRNKIDHPDEESYIQTVR
                     GTGYVMRT"
     gene            complement(6557..7975)
                     /gene="gndA"
                     /locus_tag="U0290_002445"
     CDS             complement(6557..7975)
                     /gene="gndA"
                     /locus_tag="U0290_002445"
                     /EC_number="1.1.1.44"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADP-dependent phosphogluconate dehydrogenase"
                     /protein_id="HEM2302480.1"
                     /translation="MAKQEIGVIGMGVMGRNLALNIESRGHTVSIFNRSTEKTKAVME
                     ENADKKLVPTYSLEEFVESLEVPRRILIMVKAGDATDMMIEAVKPFLNEGDILIDGGN
                     AFFKDTIRRNKELSEEGFNFIGTGVSGGEEGALKGPSIMPGGQRKAYDLVAPILREIA
                     AVADGEPCVTYIGPDGAGHYVKMVHNGIEYGDMQLIAEAYTILKEIGGLSHDELADVF
                     EEWNNGELDSYLIEITKNILKVKDEETGKPIVDVILDKAGQKGTGKWTSQSALDLGVP
                     LSLITESVFARYISALKDERVYASTVLSGPSNYRFEGDKKAFVESVRRALYFSKIASY
                     AQGFAQMRAASEENDWDLQYGEIAKIFRAGCIIRARFLQKITDAYNKDKNLKNLLLDP
                     YFKDIAHNYQGDLRTVVAEAVKAGIPVPTFTAAISYYDSYRSEVLSANLIQAQRDYFG
                     AHTYERVDKPGVFHTEWPQVED"
     gene            complement(8120..9217)
                     /locus_tag="U0290_002446"
     CDS             complement(8120..9217)
                     /locus_tag="U0290_002446"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M20/M25/M40 family metallo-hydrolase"
                     /protein_id="HEM2302481.1"
                     /translation="MMISNVKKYFTELIQTPSVSGKETAILTYIKKHLAKLNIEYSLD
                     EDYGLIARIPATKEKFPTIFFCSHVDTHPNAATPVFQMEQDVFTVEEGTSLGADDKAA
                     VAAMLAAIDYFCAERTAHGEIEFIFTTKEELGMIGMRLFPEEKITAAYGYCLDAPGEV
                     GNYQLQANTLVALEFTIASSEAAQMSPISIARMALHATRPGRIDRENKWEIQSFSGGI
                     NDENQQDAQLEVLFTSAASFRKALLHIQTIRERFAQTCEKYGALLTHDTKLIYEGYRI
                     RSKHPLMNIFQKAAKKQSLETREIFLEGGTDANVLNEKGIPTMLLSAGYENAHTEEET
                     VSVEQLEKLTQLVIDLAESAKNEKILLRKLN"
BASE COUNT         2702 a         1832 c         1631 g         3074 t
ORIGIN      
        1 acttgccagt ctgaatttgc tatagtatag tattaatgcg caaacttgtg gagaattttt
       61 cttacacatg aaatatattt tgaagggtga taagattatg agtgactatc aagtgttgtt
      121 atattacaaa tacacaacga ttgatgatcc agaaactttt gcaaaagagc atcttgctgc
      181 ttgcaaagaa atggaattaa aaggccgaat tttggtggct actgagggga ttaatggcac
      241 cgtttcgggt acagtagaag caacaaacaa atatatggat tatatggcaa acgatgctcg
      301 cttcgctgat atggtattta aaattgacgc ggctgatgct catgctttta agaaaatgca
      361 tgtacggcct cgtgctgaaa ttgttagttt aagtttagaa gaagatgtta atcctttaga
      421 agttacaggg acttatttag agccttctga gtttcgtgaa gcattgttgg atgaagatac
      481 ggttatttta gacgctagaa atgattatga atttgatatc ggtcatttcc gcggcgctgt
      541 tcgtccagat attcaaaatt tccgtgagtt accaggatgg attgaagata atcgcgagca
      601 acttgctgat aaaaaaatcg tcacttactg tactggtggt attcgttgtg agaaattttc
      661 tggttggtta aaaacagcgg gttttgatga tgtaagtcaa cttcacggcg ggattgcgac
      721 ttacggtaaa aacgaagaaa ccaaagggga actttgggac ggccaaatgt acgtttttga
      781 tgaaagaatc gcggttccga ttaaccaagt aaaccctact atcgttggga aagattactt
      841 tgacggcacg ccttgcgaac gttacatcaa ttgtgctaac ccgtattgca ataagcaaat
      901 cctagcttct atcgaaaatg agaaaaaata tttgcgtagt tgttcgcatg attgccgcgt
      961 tcatcccgca aatctttata cgaaaaattt atctaaagaa gaattcactg aacgccttca
     1021 agcaatcgat gaaactttac cagaaatggt tcaataaata aaaaaccagc tttgctaaat
     1081 gaatagcagc tggtttttat tttctattag ctagtttgac taaatcgatt tctcgtaatg
     1141 cgccccattt agcaagttca ccacttatga ttaatggcgt tgtttttaat tctgagatgt
     1201 ttttcgcatt tgcaagaaca aataagccac gtagttgttc tttccatagc tccagttttt
     1261 caatggtttt ggtgacgccc tcttttttta gtgaataaat aatttgtcct gccataccta
     1321 cactatctgc tccgagcgct aatgctttaa cgatatctaa cgggttccta ataccacctg
     1381 acgctaaata agcaatcttt ggcgcatctt ggtgttgcat gtctattaaa gcctgtccgg
     1441 tggaaatacc ccaatcaagt aagaaatcat atgcttgatc acggcggcga tcattttcaa
     1501 tttgggcaaa gtttgttccg ccttttccag ctaaatctac ggtttgaacg ccgatatcag
     1561 ctagcgtttt tactgtttca cgcgtcattc caaagccaac ttcttttaca actactggaa
     1621 ctggcgaaag cttgacgtac tcttctattc tagttagcca atgactaaaa gaacggtcgc
     1681 cttcttgcat aactaattct tgtgccgggt taatatgaat ttgaagtgca tttgcctcta
     1741 acatttcgat cgcccgaagt ccctcttgaa gggctacttc tggactaata tttgctaaaa
     1801 tcatcccatt cggattgatt tctctgacaa ttttataggt atctattagc gaactatttt
     1861 ttagagctgc agactgggaa ccaacagcca ttgggatagc tacttcgcgt gctatttcag
     1921 caagttcggc attaattttt ttcgtatgcc gacttccacc tgtcatcgca ttaatataca
     1981 atgggaaagg cacattggtc cccacaatag ttgtggttaa atcgatatct ttcacattat
     2041 agcgcgggat agaagttcca atcagttgaa tatcttctaa actcgatggc gctaactgct
     2101 cattctgttt tactccaaga gccacgtgtt cgtcttttcg acgttctctt aataagtcat
     2161 cgttcttctg catgtgttaa tcctccaaat ttcttttcgc ctcaagcaaa ggttaaaaca
     2221 ggtttaaaaa tcgtctcttt ttcttcggga gttggttgat acacttcccc atcagaaaat
     2281 aaaataagcc cgtgaaatgt ttgaatatca tcttcacagt cctcgcagta ctcaacttct
     2341 tcttcattcc aagctgctaa caaacaatct ttttttgttt gatgattagg ataattccgt
     2401 agtaactcgt ctgctaactc ttgatacttc agaaaggcag cttccttatc tgaaaaagca
     2461 aagtcggctt gaatggaagt ttcccattcc tcgaaaaacc accaaggctc gtattctcct
     2521 ttagttagat agacattcca ttttgtcata tcaaaaactc ccaacagtaa atatagtaca
     2581 cttattatag cataagcttt ctggaaatac tggaatgcaa atttttgaaa gtaatgctaa
     2641 aaaaagatac actagtaata aggaaaaata aaaggagttg gtttcgttat ggctagagat
     2701 acagcgattt tgagagtgac tggatttgtg caaggtgttg gatttcgtta cacaaccaaa
     2761 cacgttgctt acaaatatga cattagtgga acagtgaaaa atttagatga cggttccgtt
     2821 gaaattcatg caattgctga agaagaaaac ttaaataaat tcattgatgc tatcaaaaaa
     2881 ggcccatcgc ccggttgtcg tatcgaacac gtttatattt acaaaggtgc ccctgtagaa
     2941 gaacgaaaaa catttgatat cgtttactaa aattccaaaa atagtagttg tgctatagct
     3001 ctttttgcat tatagttaat gagtactaaa accttgaaag gagcgactgc gtggcatgat
     3061 ttccatttta caaattttac ttgaaccaga attcatttca ctcacagtaa cgtttttatt
     3121 aatgttgacg attttcagtt attggtcagc cattacatta ttaaaaccga aaatggtgct
     3181 acccgctgac gctatctgct taaagctagt aaaaatttca cttcgagctc aaatttatat
     3241 aactacgcct aattttgtta ttaattggct ggctataacc aggaaatgta gcgccattac
     3301 tgatgatgaa gacagttttt cattttccaa cgtatgaatt gattatttta ctatttagga
     3361 ggaaaatgaa acattgaaaa agaaaaatat tattttaatt agtgttttac ttggtgcttt
     3421 actattactt acaggttgta gtatggaccc ttcacaaaat acagatggtt ttttcagcac
     3481 ttatttaatc caaccattta ctagttttat tatgttcgtt gcaaagtttg ttgggggtaa
     3541 ttacggaatt gcgattatta ttacaacgtt acttatccgt gcactaatta tgccactaaa
     3601 cttgcgtact gctaaagctc aaatgggaat gcaatccaaa atggccgttg ccaaaccaga
     3661 aattgatgaa attcaagctc gactaaaacg tgcaacatcg aaagaagaac aagccactat
     3721 tcaaaaagaa atgatggccg tctattccaa gtataatatc aatccaatgc aaatgggttg
     3781 tttaccatta cttattcaaa tgccaatatt gatggctttc tattatgcta ttcgcggatc
     3841 ttccgaaatt gctagccaca cattcttatg gtttaactta ggttcaccgg atatggtgct
     3901 agcaattatc gccgggcttg tctacttagc acaatacttt gtttccatga ttggttattc
     3961 accagaacaa aagaaacaaa tgaaaattat cggtttaatg tctcctatta tgattttatt
     4021 cgtttccttc acagctccct ctgcactagc gttatactgg gctgtcggcg gactcttctt
     4081 agcaggtcaa acattactaa cgaaaaaact ttacatgaat aaacacccag aaattaaagt
     4141 aatggagcaa gaagaaaaag aattcgagca aatcgtggaa gaacaaaaga aagaaaaata
     4201 aaaaaaaccg caacctcgtc ataaggttgc ggttttttta tttggatttt ggttcaatgt
     4261 aaggaagtgt aatttttatc gttgtacctt tatctggctc actaaccgca ttaatcgttc
     4321 ctaaatatcc ttcgactaat tgtttagcaa tcgcaagtcc gaggccatta ccaccttttt
     4381 cgcggcttct ggctttatct acacggtaga agcgattgaa tattttatca atctcttctt
     4441 gtgagatgcc ttccccgtaa tcgcgcacat caatatggat ttgcttttgt tctttataga
     4501 catgcatatc cacttcggtg ccgtcacctg aatacttcac ggcattatcc ataataataa
     4561 ttaaaatctg ctctaaatga ttatgttgaa taagtgctcg taaatcagta tcatcttctt
     4621 ttaaagtaaa cgtgaaattt tcatacatca cttcaaaatt acgtcttact tgttctacag
     4681 ttgcatttac atcggtaatt tgtaattctt ttgtttgtga aatttgttcc gctcttgata
     4741 aatcaagcat ttcttgtact aattttttca tacgttctaa ttccgttaac gaagcgttta
     4801 atgattcatc aagtacagcc ggatcatctt ttccccaacg agtgagtaat tttaaatggc
     4861 cttccataat ttgcactggg gtacgtaatt catgagaagc atcctctacg aattgctttt
     4921 gctgttcaaa actagtttca attcgtgtca tcatatcatt aaaaacaacg gtcaattcgc
     4981 caatttcatc gcgggaattg gttttcgttt cgattcgttt ttggaaacca ttttttcgaa
     5041 tatcattcat tgttcgagct agacgagtca gtgggtttaa gaaattttgt gctagcaagt
     5101 agccgagcat tccactaata aagagcgcca ctgccccaag taaaatcatc gtaacgagaa
     5161 gccggtccat catccgatta taggaagtga gcggatttac cacctgcgcg taaccaatca
     5221 cggtcgtatt gtcgtccgct acaatgggca tttgcgccgt catcatcttc tgtccgtcaa
     5281 tcgttggttt attcataata aacttgtccg taccactaac aaaatactgc gaaaaatcaa
     5341 tgctagtaat atcttgactt cttgaaaaat aatacttatt aataaaatgg ccgtctttat
     5401 catacagatt aattacttga tcttgtaatt ttcgattcac cgttttatcg ttattaaata
     5461 aatacttaat ttcctcatta tcggtcaaat cttgattcgt taaagtgctc gttgttgcta
     5521 gaagcagttc ttttacttct ggttcttctt catttaacaa catttgccca attccttggt
     5581 aaatggcata ggaaaataag aaaaaagtta gaaaaatagc tgcactagct ccaaaagtcc
     5641 atttgaattt caaagaacga ctttttaagg aaaatgggct agtcgtcatg tacgcatcac
     5701 ataccctgtc ccgcgaactg tttggatata actttcttcg tcaggatgat caattttatt
     5761 tcgtaagtaa cgaacgtaca catccactac atttgtttct acttctgttt cataacccca
     5821 tactttattg agtaacactt cccgcgtaag aacgatatta acattttcca ttaacgtaag
     5881 taaaagttca tactctcgtt ttgttaagtc aatgatttct tcgtcgcgtt tgacaatgcg
     5941 attttccttt tcaacaatta gattacgata ctgtagcgtt gtttgtttag cagattgttc
     6001 tgcattttcc acccgacgca atagcgagcg aaggcgcgca agtaattctt caatagcgaa
     6061 gggtttgacg atgtaatcat ctgctccgtg atccagtccg gatacacgat cgataactga
     6121 gtcacgtgcg gttatcataa taatgggtgt ttgtttcact tggcgtacac gacgacaaac
     6181 ttctacaccg tttaaatgcg gcaacattag atcgagtaaa atagcatccc attcttcatt
     6241 aagtgcgagt tctagtccag cacgtccatc attagcaacc gctgtttcat aattttcatg
     6301 ttgtaattcg agttcgataa agcgtgctaa gtttttttca tcttctacga ttaatattct
     6361 attcatttgg cctaaccctc tctttcggtc attacactat attcctatta ctattgtaac
     6421 gaactttagc tcaaaaacaa ctaataacag cgcataaata gatattttca ctatttttta
     6481 gcactttacc atgatttact aattcaaatc tcataaaaaa ggcacccact cgttaaagtg
     6541 gatgccttat cttccatcaa tcttctactt gtggccattc tgtatggaat acgccaggtt
     6601 tgtcgactct ttcatacgta tgagcgccaa agtagtcgcg ttgtgcttgg attagatttg
     6661 cagataatac ttctgaacga tagctatcgt agtagctaat tgctgcagtg aatgttggaa
     6721 ctggaattcc agcttttact gcttctgcaa caactgtacg aaggtcgcct tggtagttat
     6781 gtgcaatatc tttgaaatat ggatctaata ataagttttt aagattttta tctttattat
     6841 aagcatcagt aattttttgt aagaaacgag cacggataat acaaccagcg cggaaaattt
     6901 tcgcaatttc gccgtattgt aagtcccaat cgttttcttc actagctgct ctcatttgtg
     6961 caaaaccttg tgcataagat gcgattttgc tgaaataaag cgcacgacga acagattcaa
     7021 caaatgcttt tttgtcgcct tcaaaacgat aattagatgg gccagataaa acagtacttg
     7081 cataaacgcg ttcatcttta agtgcagaga tgtaacgagc aaatacagat tctgtaatta
     7141 aggaaagtgg aacacctaag tcgagtgcgc tttggctagt ccatttacca gttccttttt
     7201 gacctgcttt atcaaggata acatcgacaa taggtttgcc agtttcttcg tcttttactt
     7261 ttaggatgtt tttagtgatc tcgattaaat agctatcaag ttccccgttg ttccattctt
     7321 caaatacgtc agcaagttca tcatggctta atccaccgat ttctttcaaa atagtgtaag
     7381 cttctgcgat taattgcata tcgccgtatt cgataccatt atgcaccatt ttaacgtaat
     7441 gtccggcacc gtctgggcca atataagtca cacaaggttc tccgtctgct actgcagcaa
     7501 tttcacgtaa aataggtgct acaaggtcat atgccttgcg ttgaccacct ggcatgatag
     7561 aaggaccttt tagtgcacct tcttctccgc ctgatacacc agttccgatg aagttaaatc
     7621 cttcttcact tagttcttta ttacgacgaa tcgtatcttt gaagaaagca ttaccgccat
     7681 caattaaaat atcgccttcg tttaagaaag gtttaactgc ttcaatcatc atatctgtag
     7741 catcgccagc ttttaccata ataaggatac ggcgaggcac ttcaagagat tcgacaaatt
     7801 cctctaaact ataagttggt actaattttt tgtccgcatt ttcttccata actgctttcg
     7861 ttttttcagt cgagcggtta aagatagata ctgtatgacc gcggctttca atgtttagag
     7921 ccaagttacg acccataacg cccattccta taacgccaat ttcttgtttt gccattttgc
     7981 acttcttcct ttccggttta ttaaggcaga aaaatctgtc ttacttcaac atgacacata
     8041 aaagtatcaa catcatttac tatatcaaag aattgcttct tggacaatga atcaatccga
     8101 attatttgac tttttttcac taatttagtt ttctgagaag aattttctcg ttttttgcgg
     8161 attctgctaa gtcaatgacg agttgagtaa gtttttctaa ctgctcaaca gatactgttt
     8221 cttcttctgt gtgcgcattt tcgtatccag ctgataagag catggtcgga ataccttttt
     8281 cattcaacac atttgcatct gttccgcctt ctaaaaatat ttctcttgtt tccaaagatt
     8341 gtttttttgc ggctttttga aaaatattca ttagtggatg cttagagcga attcggtacc
     8401 cttcataaat taattttgta tcatgcgtca aaagagcacc atatttctcg caagtttgcg
     8461 caaatcgttc tctaatggtc tggatatgca aaagcgcctt acgaaaactt gctgctgatg
     8521 taaaaagaac ttctaattgg gcatcttgtt gattttcatc atttattcca ccagaaaacg
     8581 actgaatttc ccatttgttt tctcggtcaa ttctgcctgg ccgcgtggca tgtaacgcca
     8641 ttctcgctat agaaatcggt gacatttggg cagcttcaga acttgcaata gtaaattcta
     8701 atgcgactaa cgtatttgct tgtaattgat aatttccgac ttcacctggt gcatctaaac
     8761 agtatccata agctgccgta attttttctt ccggaaataa acgcattcca atcatgccga
     8821 gttcttcttt cgtcgtgaaa ataaattcaa tctccccatg agctgttcgt tctgcacaaa
     8881 aataatcaat agccgctaac atagctgcta ctgctgcttt atcatccgca cctaaagaag
     8941 tgccttcctc taccgtaaat acatcttgct ccatttggaa aactggcgtt gccgcatttg
     9001 gatgcgtatc cacatgacta cagaaaaaaa tcgttggaaa tttctcttta gtagcaggaa
     9061 ttcgagcaat taaaccataa tcttcatcca aactatattc aatgtttaat tttgctagat
     9121 gtttttttat atacgtcaaa atagctgttt ctttccctga gacagatgga gtttggatta
     9181 attcggtaaa atattttttt acattggata tcatcatttt tccacctaca ttcttccta
//
LOCUS       DASDYO010000121         9049 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.121, whole genome shotgun sequence.
ACCESSION   DASDYO010000121 DASDYO010000000
VERSION     DASDYO010000121.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 9049)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 9049)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..9049
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.121"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(9..419)
                     /locus_tag="U0290_002447"
     CDS             complement(9..419)
                     /locus_tag="U0290_002447"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917619.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302482.1"
                     /translation="MREIEFRGKAIHPNSLEQIVGSWAYGGIFENKIISRNLDMDSHY
                     HGFISEIEIDLKTIGQYTGLKDKNGKKIFEGDIVDISVYDRLDWSSIKGKVVFLNGAW
                     LVEDVGHFAITLQSETNEIEIIGNVHENLGLWEA"
     gene            complement(416..784)
                     /locus_tag="U0290_002448"
     CDS             complement(416..784)
                     /locus_tag="U0290_002448"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743918.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302483.1"
                     /translation="MRAIKFKGKRKDNGKWAHGYFVIDDCDCAYIINVENDGYSAIPI
                     IKTCYEVDAETVVCAGEQESKQLVRLLETARKLEIKKNEDNVHPGRISKEKEAWIEGL
                     EFATNIAIDFFKVRKEWAEK"
     gene            complement(771..947)
                     /locus_tag="U0290_002449"
     CDS             complement(771..947)
                     /locus_tag="U0290_002449"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302484.1"
                     /translation="MTVAELIEALNRHDKHLPVFIGTSLLCEVEKDSLCNEVIDVPVL
                     FLKTAIEVQWHESD"
     gene            complement(944..1549)
                     /locus_tag="U0290_002450"
     CDS             complement(944..1549)
                     /locus_tag="U0290_002450"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1642 domain-containing protein"
                     /protein_id="HEM2302485.1"
                     /translation="MKFRKGDKVEFIWSGKLKQGVVTEIEETKNAISYQIKYSGDMGM
                     TWLDERDLIAPAQVLKVPQFVADWIEQRDAKGDDLYTAMDKSWQSMNYKVIDWLEEGE
                     DRYNKFARAWLDGYEVEKEPLYYVRLPLSTWNDDAAELEVINMYVLLNIQSDETTFTG
                     SIINKNKKWKTKLTEAEIKGMPGGDIYWQFAVPVEEVEGEA"
     gene            complement(1546..2358)
                     /locus_tag="U0290_002451"
     CDS             complement(1546..2358)
                     /locus_tag="U0290_002451"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEM2302486.1"
                     /translation="MKRILNYPGSKWSLADLIIDNMPEHKSYLEPFCGSCAVFMNKQK
                     ATLETINDLDSRLVNLFKAMRDNPEKLQYLIMHTLYSREEYMLSHEISSDSLEDARRM
                     AVRLWFAVGGKTNANVGFRKNVSWNGPYNAYEWNDMYNRIGIAAARLKDAQIENVDAI
                     KLIEQHNDKDTLIYCDPPYIPTSLVSPHYQHDFSLEQHKELLKVLKNHEGKVMLSGYE
                     SELYKQELSDWPALKTMTKVGITSEKKSDRQEIIWCNFEPPMQLNLFKEEQA"
     gene            complement(2355..2645)
                     /locus_tag="U0290_002452"
     CDS             complement(2355..2645)
                     /locus_tag="U0290_002452"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302487.1"
                     /translation="MFFLGKYYWHVSRLGGKPTEIRHYKHITKMYKFILRNPAMFKDK
                     TLTIYDHAKPVTNMTFNEIKYRASLNLCETVERKYVLGLKQRLTEEQKEARK"
     gene            complement(2664..2915)
                     /locus_tag="U0290_002453"
     CDS             complement(2664..2915)
                     /locus_tag="U0290_002453"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929521.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302488.1"
                     /translation="MKTIANEYQEYITERIRLGDNGIKLTAYSFENGYQARVIENLDS
                     NFVSLVLVKSHDGKNSIKDILLELTNEQLIEKLEEIKNL"
     gene            complement(3223..3375)
                     /locus_tag="U0290_002454"
     CDS             complement(3223..3375)
                     /locus_tag="U0290_002454"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734667.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302489.1"
                     /translation="MKLLRFFGLVSVDENGNEYIEKSDRNTLICLALTVLIAFVAGIG
                     GLILNG"
     gene            complement(3610..3795)
                     /locus_tag="U0290_002455"
     CDS             complement(3610..3795)
                     /locus_tag="U0290_002455"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730997.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302490.1"
                     /translation="MNDEIQDLIVEIRKYDPNYIPKSVGKYLLVELQSRHLDHQIKYK
                     KRPKYKHRFANSIERHW"
     gene            complement(3820..4008)
                     /locus_tag="U0290_002456"
     CDS             complement(3820..4008)
                     /locus_tag="U0290_002456"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302491.1"
                     /translation="MIIKLDKGSYYSQQELLKQLSIGYETLRKLEIKGELSARKLGKT
                     IYYQGADVLDSWDRMLKR"
     gene            complement(4027..4218)
                     /locus_tag="U0290_002457"
     CDS             complement(4027..4218)
                     /locus_tag="U0290_002457"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012951520.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302492.1"
                     /translation="MSVEHRRFAVAIYAKLKAINMKQSDLAKMLGISNPYLSDIINGK
                     RDASKVRKEIAEILEIDVD"
     gene            4484..4807
                     /locus_tag="U0290_002458"
     CDS             4484..4807
                     /locus_tag="U0290_002458"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003747248.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302493.1"
                     /translation="MTTFERVKVLAEKQKISLKELALKLNMGENAIYSWKVKTPGADK
                     LKAVADYFNVSTDYLLGRTDNPQIGKDITEEVVTLAAHIDPSATEEDMKKILEYIDFI
                     QQKYK"
     gene            4824..5276
                     /locus_tag="U0290_002459"
     CDS             4824..5276
                     /locus_tag="U0290_002459"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_038330224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HEM2302494.1"
                     /translation="MWLDIYREQYPELTIIEDRNMEYAHKGLYINQHILVNPNQNDTE
                     MRCTLAEEIGHYKLTVGNITKQKTINDIKQEKLARNWGYKSLVPLRKIIDAYYEGFTE
                     YYEVSEFLEVTEDFLKHSIEYYRSKFGNTIECNGYIIILRSSIQIIAC"
     gene            5323..5799
                     /locus_tag="U0290_002460"
     CDS             5323..5799
                     /locus_tag="U0290_002460"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302495.1"
                     /translation="MKKIFLIINLLLAFSFALTACGNDDVKSKNTTEKEESTRKNNEK
                     DKLEKSKKSSKKTNLKISDASVITQVQFYIEKYDKIDNVKWSWNSDKYNITKMPAVKS
                     TEDGKSFNDVYSAHGTYSWNDKKYNYAITVNFPNENSSQLISLKTDMGTNIEIPTE"
     gene            5933..7078
                     /locus_tag="U0290_002461"
     CDS             5933..7078
                     /locus_tag="U0290_002461"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917608.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM2302496.1"
                     /translation="MDKRIKSYLNSKNEISYMFRVYAGIDNMTGKRKQTTRRGFKTER
                     EAKMELKRIEMQIFEEGGLKTQKKALKFEEVYSTWLELYTQTVKESTLERTKIFFNHH
                     ILPVFSDKFIDKIDIHFCQQVINAWSKSNPTSYKRLKNLTSRVFKYAISLHLIESDPF
                     AFVVVPRGEMIEKEEKDITFYDKYELRSFLDTVKDDTFKYTFFYLLAFTGLRKSEALA
                     LTWNDVDLNNKRLYVNKTLSRGEHARILVNATKTKAGKRDISIDASTVDVLKKWKSYQ
                     RGNHQILRLDKVQIIFDNEGNYYNPSSTYSWLDNIFKHHTELKKITSHGFRHTHASLL
                     FEAGASLKDVQERLGHADIQTTSNIYTHVTQEKKDSTASLFSDFMLK"
     gene            7158..7247
                     /locus_tag="U0290_002462"
     tRNA            7158..7247
                     /locus_tag="U0290_002462"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:7194..7196,aa:Ser,seq:cga)
     gene            complement(7316..7909)
                     /locus_tag="U0290_002463"
     CDS             complement(7316..7909)
                     /locus_tag="U0290_002463"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2302497.1"
                     /translation="MKHHHNHHGEAGFKRKVDYLDRPERSEVLSPEDFLQAMPIGKTA
                     SILDLGAGTGFLTIPAAKFVDNTVFALDLDAKMLELIESKAKEAGLANVETLEASMDD
                     IPLEANSVDVVLASLVLHEADSLADVLREVSRVVKTGGYFASLEFDTKGTDLKGPPME
                     IQISAEKLKEELAGFGFEVVKNWQLDEGMYVSIAEKK"
     gene            complement(7922..8338)
                     /locus_tag="U0290_002464"
     CDS             complement(7922..8338)
                     /locus_tag="U0290_002464"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM2302498.1"
                     /translation="MKFSKATNYALHTMVYLANLSPEKSVGVKELATKQNVSPTYLSK
                     VLTMLVKAGFIESVTGVNGGYKLAEPASSISFLDVIQAIEGKGAFFHCDPKNHSESQP
                     HCLIGEVMNKAEQQMEDYLSKQTVGSIVVEIEKHQH"
     gene            complement(8443..>9049)
                     /locus_tag="U0290_002465"
     CDS             complement(8443..>9049)
                     /locus_tag="U0290_002465"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="HAD-IA family hydrolase"
                     /protein_id="HEM2302499.1"
                     /translation="KIENLYIKSRFYSDEVYHRVVQGEMPKAAMHVYRITQALNDFDY
                     QITKKEAEAFQHAYEQNQRKIELTSGIKEILTWAKKNEITMGIITNGPKEHQQHKIND
                     LQINDWIPTEHTFISGKVGIEKPDKKIFKLVEEQIGIKGAETYYIGDSFENDVIGSKS
                     AGWKSIWLNRRGHLIPTEAAFQPDYCVENEQQLFAILQEIF"
BASE COUNT         2771 a         1804 c         1389 g         3085 t
ORIGIN      
        1 gtcatttact atgcctccca caatcctaaa ttttcgtgca cattaccgat aatttcgatt
       61 tcatttgttt cagattgcag agttatcgca aaatgcccta catcctcaac tagccacgcg
      121 ccattcaaaa atacaacctt gccttttatt gagctccaat caagacgatc ataaacacta
      181 atatcgacta tatccccttc aaaaatcttc ttgccgtttt tgtcctttaa acctgtgtat
      241 tgaccgatgg tttttaagtc aatttcaatt tccgaaataa acccatgata atggctatcc
      301 atatctaaat ttctagaaat aattttattt tcaaatatcc ctccatatgc ccaactgcct
      361 acaatttgtt caagactgtt tggatgaatc gctttccctc taaactcaat ctctctcatt
      421 tctctgccca ctcctttcgc accttgaaaa agtcaattgc aatatttgtc gcaaattcta
      481 ggccttcaat ccacgcctct ttttctttcg atatccgacc aggatgtaca ttatcttcgt
      541 ttttcttaat ctctaacttt ctagctgttt ctaaaagtct tactagttgt ttgctttctt
      601 gttctcctgc gcacacgaca gtttcagcat caacctcata acacgtcttg attatcggaa
      661 tagcgctata tccgtcgttc tcaacgttta taatatatgc acaatcacag tcatctatga
      721 caaagtatcc gtgcgcccat ttgccgttgt ctttgcgctt tcctttgaat ttaatcgctc
      781 tcatgccatt gcacctctat tgcagttttt aaaaacaaca cgggcacgtc aatgacctca
      841 ttacataacg aatccttttc aacctcacat aaaagtgaag ttcctatgaa aacaggcaag
      901 tgtttgtcgt gtctattcag tgcttcgatt aattctgcta ctgtcatgct tcaccctcca
      961 cttcctcaac aggaacagca aactgccaat atatgtctcc tccgggcatg cctttaattt
     1021 ccgcttctgt taatttggtt ttccatttct tatttttatt gataattgat ccagtaaaag
     1081 ttgtttcatc agattgtata tttaacaaaa catacatatt aatcacttct aattcggctg
     1141 cgtcatcgtt ccatgttgaa agcggcaatc ttacataata aagcggttcc ttctcgactt
     1201 cgtagccgtc tagccaagcg cgtgcgaatt tgttgtatct gtcttctccc tcttctagcc
     1261 agtcgattac tttatagttc atgctctgcc agcttttgtc cattgcggtg tataaatcgt
     1321 caccctttgc atctctctgc tcaatccaat cagcaacaaa ttgcgggact tttaaaactt
     1381 gagctggcgc aatcaaatcc ctttcatcca gccaagtcat gcccatgtct ccactatatt
     1441 taatttggta ggatatagca tttttagttt cttctatttc agttacaaca ccttgtttca
     1501 atttacctga ccaaataaac tctactttat cgccttttct aaatttcatg cttgttcctc
     1561 cttaaaaaga tttaattgca taggtggctc aaaattgcac caaataattt cttgcctatc
     1621 tgatttcttt tctgatgtaa tgcctacttt tgtcattgtt ttaagagctg gccagtctga
     1681 taactcttgt ttatatagtt ctgattcata gccgcttaac attactttgc cctcatgatt
     1741 tttaagcact ttgagtaact ctttatgttg ttctaaacta aaatcgtgct gataatgtgg
     1801 acttactagc gatgtcggaa tatatggcgg gtcacaatat atcagtgtat ctttatcgtt
     1861 atgctgttca atcagtttaa ttgcatctac attttcgatt tgagcgtctt tcagtcttgc
     1921 tgcagctatt ccaattcggt tatacatgtc attccattca tatgcgttgt aaggaccatt
     1981 ccaagacacg ttttttctaa atccaacatt tgcattggtc ttaccaccaa cagcaaacca
     2041 gagcctcaca gccatgcgtc tagcgtcttc taatgaatca cttgatattt catgcgaaag
     2101 catatactct tcacgagaat acagcgtgtg cataattaaa tactgcagtt tttctggatt
     2161 atcacgcatt gctttaaaaa gattaactag tcgactgtct aaatcgttta tcgtctctaa
     2221 agtagctttt tgcttgttca taaagactgc gcatgatccg cagaatggtt ctaaataact
     2281 tttatgctcc ggcatattat caatgattaa atctgccaaa ctccatttac tgcccggata
     2341 attaagtatt cgtttcactt tctagcctcc ttctgttcct ccgtaagcct ttgcttaagt
     2401 cctaacacat actttcgttc taccgtttca cataaattca aactagctct atacttaatt
     2461 tcgttaaacg tcatgtttgt aactggtttt gcgtgatcat aaatcgttaa agttttgtct
     2521 ttgaacatag caggatttcg caaaataaat ttatacattt ttgtaatgtg cttatagtgt
     2581 cgaatttctg tcggtttccc accaagcctt gacacatgcc aataatattt ccccaagaaa
     2641 aacatccttt ctaacttctt aatttataaa ttctttatct cttctagctt ttcaatcagt
     2701 tgttcgttcg ttaattcaag caaaatatct tttatagagt tttttccgtc atgagacttt
     2761 acaagtacga gtgatacaaa attagagtca aggttttcta tcactctcgc ttgatagcca
     2821 ttttcaaaac tataagcagt tagctttata ccgttgtcac ctagtcttat tctttctgtg
     2881 atgtattctt gatactcatt tgcgattgtt ttcatgtgtt taactccttg ctcagccata
     2941 tttgagtttc tttgttatct ttctttgatg tctcatttat caatcgctct aaaatctcaa
     3001 tctgaaaatc aatttctttg cgttttttct ttttgatata acaacatttc ttttaatctg
     3061 cataaatcga ttgtattttc tacattcatc tatcaacgct cctcagtgtc gaaatccatc
     3121 atcccagtaa tcatcaacta tcatcggatt ttctacattc attctctatc actccttgca
     3181 agcagcatta atagtagtat taatgcaaca atcattatta attcagccat ttaatatcaa
     3241 tccgccgatt cctgcaacga atgcaattaa cactgtcaaa gctaaacaaa ttaatgtatt
     3301 tctgtctgat ttttcaatat attcatttcc gttttcatct acactgacta gtccgaaaaa
     3361 tcgtaaaagc ttcattgcaa aacctcattt caaaaatatt tttatccatt cagcgataat
     3421 atatgtgact gataataatg cacctacttg aaaacaaaac ataaatacta gtagcttact
     3481 ttcatgttca tttaaaaatt tcttcattct catatctcca tttctgtgat ataattacct
     3541 taaatattat tttgtaactc acggttttag taagctctaa cttactattt atagctgtgg
     3601 gtttttcttt taccaatgcc gctcaatcga attcgcgaat ctatgcttgt acttaggtct
     3661 tttcttatat ttaatttgat gatctaaatg ccttgattga agttcaacta gcaaatattt
     3721 tccaaccgat ttcggaatgt aatttgggtc gtattttcgt atttcaacaa ttaaatcttg
     3781 aatttcgtcg ttcatcttca caccttctta tattcatatt cacctcttta gcatcctgtc
     3841 ccaagaatct agaacatctg caccttgata gtagatagtc tttcctagtt tacgtgcgga
     3901 aagttctcct ttgatttcaa gtttccttaa tgtttcataa ccaatgctta attgtttaag
     3961 taactcttgt tgcgaataat aactgccctt gtctaatttg atgatcattt aatgtcaatc
     4021 tcctttctaa tcaacatcta tttctaaaat ttccgcaatt tcttttctaa ctttcgatgc
     4081 gtctcttttg ccgtttatga tatctgataa ataaggattg ctaataccta acatttttgc
     4141 taaatcagat tgtttcatat ttattgcttt tagttttgcg tatatcgcaa cagcgaaacg
     4201 tcgatgttct actgacatgt gtttgctcct ttctacctta ttagctaatt atttagcata
     4261 ctgttgacaa aaagaactct atagagtact atataaacat agctaaacaa gccttcttaa
     4321 aagccataaa tcgttgggga acgagtatta tatgggttat ttggtgtctt gattagctaa
     4381 ataattagct tatgaacata gtatagtact ctttagaata atagtcaagt gttttattat
     4441 tctttttcgt actttcatat gtttctttgg agggaatatt gacatgacta cgtttgaaag
     4501 ggtaaaggta ttagcagaaa aacaaaaaat atctctcaaa gaactggcgt taaaattgaa
     4561 tatgggagaa aatgctattt actcatggaa agtaaaaaca cctggcgctg acaaattaaa
     4621 agcagtagca gactacttca acgtctctac cgattatctt ttagggcgta ctgacaaccc
     4681 gcaaattggc aaagacatca cagaagaagt tgtaacacta gccgcgcata ttgatccatc
     4741 cgcaacagaa gaagacatga aaaaaattct tgagtatatt gatttcattc aacaaaaata
     4801 taaataagaa atgagatgaa cgtatgtggc tagatatata cagagagcaa tatccagagc
     4861 taactatcat agaagacaga aacatggaat atgctcataa gggactgtat atcaatcagc
     4921 atattcttgt aaacccaaat cagaacgata ccgagatgcg ttgcacattg gcagaggaga
     4981 ttgggcatta caaattgact gttggtaaca tcactaagca gaaaacgatt aatgacataa
     5041 agcaagaaaa gcttgcgaga aactggggtt ataaatcatt agtccccttg cgtaaaatta
     5101 ttgatgctta ttatgaaggt tttactgagt actacgaggt ttcagagttt ttagaagtaa
     5161 ctgaagattt tttaaagcat tcaattgaat attatagaag caagtttgga aatacgattg
     5221 agtgcaatgg atatataatt attcttagaa gtagtataca gattattgct tgttaggtat
     5281 ttgcacaaat gtgtttatat agaaattaaa tggaggaatg aaatgaaaaa gatattttta
     5341 ataattaatt tattgcttgc atttagcttc gctttgactg cttgtggtaa tgatgatgta
     5401 aaatcaaaga atactaccga aaaagaagaa agtactagaa agaacaatga aaaagataaa
     5461 ctagaaaaaa gcaagaaatc cagtaagaaa acgaatctaa aaatatctga cgctagtgtt
     5521 attactcaag ttcaatttta tattgagaaa tacgataaaa ttgacaatgt taaatggtca
     5581 tggaatagcg acaaatataa cattactaaa atgccagccg taaagtccac agaagatggt
     5641 aaatcattta atgatgtgta cagtgcacac ggaacttatt cctggaatga taaaaaatat
     5701 aactatgcga ttactgtcaa tttccccaat gaaaatagtt cacaattaat ttcattgaaa
     5761 actgatatgg gtacaaatat tgaaatacca acagaatgag taaaataaac aaaaaacgcc
     5821 ctccccgcaa gagataagcg ttttcaaata cacacatagg agtatgcaaa ttcattttac
     5881 cataatttgc tttacccttc aaaagaacat acattcggtc aggaggataa aaatggataa
     5941 acgtattaaa tcgtatttga attcaaaaaa tgaaattagt tatatgtttc gagtttacgc
     6001 tggcatagat aacatgactg gaaaacgaaa acagactaca cgtagaggat ttaaaacaga
     6061 gagagaagct aaaatggagc taaagcgcat tgaaatgcag atatttgaag aaggtggatt
     6121 aaaaactcaa aaaaaggcgc tgaaatttga agaagtatat tccacgtggc tagaacttta
     6181 cacacaaaca gtcaaagaaa gcacgttaga acgcactaaa atatttttta atcatcacat
     6241 attgccagtt tttagcgata agtttattga taaaatagac atacacttct gtcagcaagt
     6301 cataaatgca tggtcaaaat ctaatccgac gtcatataaa cgtttgaaaa atttaacttc
     6361 tcgtgtcttc aaatatgcta tttcgttaca tttaatagag agtgatccct ttgcgtttgt
     6421 tgttgtacct cgcggagaaa tgatagaaaa agaggaaaaa gatattacat tctatgacaa
     6481 gtatgaatta cgttcgtttt tagatactgt caaagacgac actttcaaat atactttttt
     6541 ctatctgtta gctttcacgg gattgagaaa atcagaagcg ctagcgctga catggaacga
     6601 tgtagattta aacaataaac gtttgtatgt aaacaaaact ctctcacgtg gtgagcatgc
     6661 tcgcatttta gtgaatgcta ctaaaacaaa agctggaaag agagacataa gtatagatgc
     6721 atctacagtt gacgtgttaa agaaatggaa aagttatcag cgtggtaatc atcaaatttt
     6781 aagattagat aaagtacaaa tcatatttga caatgaagga aattattata atcccagctc
     6841 tacttattcg tggttagata acatttttaa acatcacact gaattaaaaa aaataacttc
     6901 tcacggcttc cgtcacacac acgcttcact tttatttgaa gctggtgctt cgctgaaaga
     6961 cgtacaagaa cgattaggac atgcagatat acaaactaca tctaatattt atacacatgt
     7021 tacgcaagaa aagaaagatt ccacagcttc tcttttttct gattttatgc taaaataaaa
     7081 tctgttgaaa ttgatttgat agtcaaaatg atagtcaaaa aatcataaat actctcaaat
     7141 cgttgatacg actgcatgga gaaataccca agtccggctg aaggggacag actcgaaatc
     7201 tgttaggcgg tgtatgccgc gccggggttc gaatccccgt ttctccgtag aaataaaaag
     7261 gttcacgctt aaaaatagct ttgattgcta tttttagacg tgaacctttt tgctgttact
     7321 tcttctccgc aatactcaca tacattccct catccaactg ccaatttttc accacttcaa
     7381 acccaaatcc cgcaagttct tccttcaatt tctccgcaga aatctgaatt tccattggtg
     7441 ggcctttcaa atcagtccct ttcgtgtcaa attccaaact agcaaagtag ccgccagtct
     7501 tcacaactct actcacttcg cgcaaaacat ctgcgagcga atctgcttca tgtaacacga
     7561 gcgatgcgag cacaacatcc acggaatttg cctcaagtgg aatatcatcc atgctggctt
     7621 ctaacgtttc tacattagcc aaacctgctt ccttcgcttt cgactcaatt aattccaaca
     7681 ttttcgcatc taaatctaat gcaaaaactg tattatcaac gaattttgca gctggaattg
     7741 ttaaaaatcc tgttcccgct cctaaatcta aaatacttgc tgtttttccg attggcattg
     7801 cctgcaaaaa atcctctggc gacagcactt cactccgctc tggtcgatcc aaataatcta
     7861 ctttccgctt aaaaccagct tccccgtgat gattatgatg atgtttcatt ttagcactcc
     7921 tttaatgttg atgtttttca atttctacga caatactacc tactgtttgt ttgcttaaat
     7981 aatcttccat ttgttgctcc gccttattca tcacttcgcc aatcaagcag tgcggctggc
     8041 tttcgctgtg gtttttaggg tcacaatgga aaaaggcgcc cttcccttca atcgcttgaa
     8101 tgacatcaag aaaactaata ctacttgctg gttccgctaa cttataccca ccattgacgc
     8161 ctgttactga ctcaataaag ccagctttca ctagcatcgt caacacttta gatagataag
     8221 ttggcgacac attttgcttg gttgcaagtt ctttcacacc gacagacttt tctggtgaca
     8281 aattagctaa ataaaccatc gtatgtagtg cataattggt tgctttggaa aatttcatat
     8341 tttcaccttc ttaattaaag acttaaccac tctataatat ctcttataat cagaagtgtc
     8401 aattcataac taaaaaacct tttccaaaaa tggaaaaagg tcttaaaata tctcctgtaa
     8461 aattgcgaat aattgttgct cattttcaac acaataatct ggctgaaatg ctgcctctgt
     8521 tggtatcaaa tgtcctcgtc tattcaacca aattgatttc caaccagcac tttttgaacc
     8581 gataacatca ttttcgaaag aatcgccaat ataataggtt tcggcaccct taataccgat
     8641 ttgttcttct actagcttaa atattttctt gtctggtttt tcgataccga ctttaccaga
     8701 aatgaacgtg tgctcggttg gaatccaatc attgatttgt aaatcattta ttttatgttg
     8761 ttgatgttct tttggtccgt ttgtaatgat tcccatcgtg atttcgttct ttttcgccca
     8821 tgtgagaatt tctttaatcc ctgacgtaag ttcgattttg cgttggtttt gttcgtaggc
     8881 gtgttgaaag gcttctgctt cttttttagt aatttgataa tcaaaatcat ttagcgcctg
     8941 cgtaatccgg taaacgtgca ttgctgcttt cggcatttcg ccttggacaa cgcggtgata
     9001 cacttcatca ctataaaatc gacttttaat atataaattt tcgattttc
//
LOCUS       DASDYO010000122         8927 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.122, whole genome shotgun sequence.
ACCESSION   DASDYO010000122 DASDYO010000000
VERSION     DASDYO010000122.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8927)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8927)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8927
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.122"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..1010)
                     /locus_tag="U0290_002466"
     CDS             complement(<1..1010)
                     /locus_tag="U0290_002466"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="undecaprenyl/decaprenyl-phosphate
                     alpha-N-acetylglucosaminyl 1-phosphate transferase"
                     /protein_id="HEM2302500.1"
                     /translation="MSWMIILICFGASVLLTPLIRKIALYFDITDKPDQRRINIKPIP
                     SLGGLAMFISFTIGMFLLPIENEFLWPLLIAAFVMVLTGLLDDIMEFKARYKLIGQVT
                     AAFIIVFWGNISIDFINLPFGGEIHFGVLSIPLTIIWIVAITNAINLIDGLDGLAAGV
                     STIALLTILGMAFIMGDALVIMIASVLIAGTLGFLPYNFNPAKIFMGDTGALFLGFII
                     SVLSVMGFKNVTFISLIVPILILGVPISDTLFAIIRRMVTKQPIAMADKSHLHHCLLR
                     LGFTHRQTVILIYAIAALFSLFAFIFTMSTLWGSMILIGVLLILIEVLIETLGLVGST
                     YRP"
     gene            complement(1130..1852)
                     /locus_tag="U0290_002467"
     CDS             complement(1130..1852)
                     /locus_tag="U0290_002467"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302501.1"
                     /translation="MIDKQSGIPIYIQIQSEIKKKMEDGVWKVGTSIPAERQLAEMFH
                     VSRMTVRQAIQGLVDDNILQRRVGAGTFIAEKKLTERLEAVTSFTNLMLQEGKVPSTR
                     IVSYGIRPASTQEQEALQLPENSNVMKIERIRYGDRVPILYEVAAIPEKIASLLTKED
                     IMDSLYKAIELKLGQPIGEAEQIMEASLVSEKIAPYLDVKLGSPVMKLRQITTLEDGR
                     PFEFTRSQYVGSRFQFVARIKQ"
     gene            complement(1868..2572)
                     /locus_tag="U0290_002468"
     CDS             complement(1868..2572)
                     /locus_tag="U0290_002468"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464482.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosamine-6-phosphate deaminase"
                     /protein_id="HEM2302502.1"
                     /translation="MQLITTENKLAGSKKALEIIEKGITSGEVNTLGLATGSTPETLY
                     AELVKSDVDTKNVTTTNLDEYVGLAANDPNSYHYYMNELLFSKKAFKESFLPNGEATD
                     AEAECARYEEILSEHPIDIQVLGIGTNGHIGFNEPGTPFDSLTHKVVLTDSTREANKR
                     FFEREEDVPTHAYSMGIKSIMNAKKIILLAFGENKAQAIKETIKGPVDVNCPASVLQN
                     HPDVTVILDNEAASLL"
     gene            complement(2588..3721)
                     /gene="nagA"
                     /locus_tag="U0290_002469"
     CDS             complement(2588..3721)
                     /gene="nagA"
                     /locus_tag="U0290_002469"
                     /EC_number="3.5.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylglucosamine-6-phosphate deacetylase"
                     /protein_id="HEM2302503.1"
                     /translation="MTNKVITNATIYTGKGVLENAFVRFDKQILEVGSMADFQADKAE
                     EVIDAKGQKLVPGFIDVHSHGGYSFDAMDADPEALRKQVNGMLNEGITTYFPTTMTQS
                     HENIEKALKVINEVAQTEPVIGGIHLEGPFVSKVFKGAQPEEYIQAPDLELFKKWFDI
                     SGGLIKLVTYAPEHDTSADFENLCFELGVVPSIGHSNDVREHLKTSKATHATHLYNAC
                     HRMTHREPGVPGHVLLERGINAELIVDGIHVHPDMVKLAYQMKGPEHLCIITDSMRAK
                     GMPEGKSELGGQTVIVKDKQARLEDGTLAGSVLTYDDGFRNMIKFTGCSVEEAVLMSS
                     GNQAREFNLTQKGAIEAGKDADFNLLDEDLHITATYSFGKKHS"
     gene            complement(3910..4755)
                     /locus_tag="U0290_002470"
     CDS             complement(3910..4755)
                     /locus_tag="U0290_002470"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PspA/IM30 family protein"
                     /protein_id="HEM2302504.1"
                     /translation="MANLFEKMKQWNKEVSEKIEKREEKRRNSVSYYMDKTKQEMKDA
                     ERMVEKQRELKSLFYKEYKEMEVYVEKRRHQAEIAKEAGETKLANFALEEVAQYEEQL
                     EATKAHYDQASEQLEKLELRMHEMRLKWKNLKTQHLAEMAEKNATETSEKMDKVIHDM
                     SWGSVSDYHEAQKQRDLAEEAEKKADMSKELSQSFDDLMDELEKKTKKSKEIIKDKAQ
                     NFTTMVDEIIEREKQNFKKPEKASMEDQLNELEKEAAKEKPKEEKEVLIPELEKKEEE
                     NETDK"
     gene            complement(4771..5085)
                     /locus_tag="U0290_002471"
     CDS             complement(4771..5085)
                     /locus_tag="U0290_002471"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464479.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302505.1"
                     /translation="MRAILIGVLIILLIAMILIVLLPAILATIGAVLGFWSLKKLLEA
                     RSVGEKVIYGILIGVGALIILANLKGILVVVIIGAIIYFLTRNKNKPRKNDDVFDYPY
                     NK"
     gene            complement(5313..5546)
                     /locus_tag="U0290_002472"
     CDS             complement(5313..5546)
                     /locus_tag="U0290_002472"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738560.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302506.1"
                     /translation="MKNKVGIIAGAVGAVAGVLACAVVYVVKKQQPPTPFDEVNDIRT
                     RYADKEISETELEENNMISEGGVSSLQYEEKVK"
     gene            complement(5640..6098)
                     /locus_tag="U0290_002473"
     CDS             complement(5640..6098)
                     /locus_tag="U0290_002473"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HEM2302507.1"
                     /translation="MIKRTGEIVLAIIGLVLSILAQAFIAIIGLLMISGSKGKEGLTT
                     FYNNYYKTMNEWEIPKKEIPDPDRVLDFVQTLSWTALTGGLITLALGIFGIYYIFKNK
                     KPVFAGYLFLAAGVVSLLSTALISFIPALLFIVVAILCFVRKPKSTFSGL"
     gene            6256..7077
                     /locus_tag="U0290_002474"
     CDS             6256..7077
                     /locus_tag="U0290_002474"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464476.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2302508.1"
                     /translation="MLKRVFFSIILPLGCLVGAIFILLTINTTYPKAANESIPTIFIH
                     GYRGTDRSLHGMIRRFDQKYDWGTESLTVNVSPDGKISTTGTYNKKEKNPLINIVFED
                     NRATLPQQSMWTKKVMSYLQQNYAIKKFNAVGHSMGGGAWVSYLASYEKNKSYPQVNK
                     IVFLAVPFYPEEYVNGDQQVDIKNANNVHAKFAEKMAKVLPNNTEIMIIGGNLEDGSN
                     SDGEVKLDSVLYGEKLFAHQKVTTHVIKGPQATHSSMHESTVVDKYVGQFLWGEK"
     gene            7098..7997
                     /locus_tag="U0290_002475"
     CDS             7098..7997
                     /locus_tag="U0290_002475"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464475.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2302509.1"
                     /translation="MKKVISLIIALAIIITGFWIIFLQFEPTKKEAKEPAVTANKTTK
                     KEQKPVSEIAIPTLFVHGYSGTINSFGGMINRLAEDGDVTKSLVMNVAADGTVSSDGN
                     YDKFSHNPTIQVIFEDNKSSAANQTQWIQNVMKELKNNYHIEKVYAVGHSMGGVSLTS
                     YIEKVGSDKTYPVLEKLVLIGAPLNGLVIGDDGVTAYDLTDSGPKKSSDRYSEFMKNK
                     QKIPTNLHVLNIAGDTLNGTKSDGSVSVASALSGKFIFEGQAASYEEKTFTGKNAAHS
                     KLHENTDVDAEVADFLWGIEKVD"
     gene            complement(8007..>8927)
                     /locus_tag="U0290_002476"
     CDS             complement(8007..>8927)
                     /locus_tag="U0290_002476"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464474.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM2302510.1"
                     /translation="AFLVTRLENVILKRVRVPRKLIVIVLYSLVAVFLYVAIVHFLPI
                     LINQISQLVDSLVKLYNNPSDNTIVKWIVGFLKESNIQKYLQAGVDFIIASLSGIGSV
                     GLSFFLALILSLFFSLEKERVTSFTGQFMTSKVGFIFKEAAFFGKKFVSTFGVVLEAQ
                     LMIALVNTFITTIALYLMDFPQLLSLSIMVFVLGLIPVAGVIISCIPLVLIAYSVGGF
                     QDVVYILITVVIVHAIETYILNPKLMSSKTNLPVFYTFIILIFSETFFGVWGLIVGIP
                     VFVFLLDILEVRNAEDLKKRTIFGRKKKVD"
BASE COUNT         2791 a         1708 c         1494 g         2934 t
ORIGIN      
        1 gggcgatatg tgctccctac taatccaagc gtctcaatca atacctcaat taaaatgagt
       61 agtacaccga ttaaaatcat cgaaccccac agtgtcgaca tcgtgaaaat gaaggcaaat
      121 aaagaaaata gtgcggcaat ggcataaatc aaaataaccg tttgacgatg cgtgaagcct
      181 agtcgtaata aacaatgatg taaatgcgac ttatctgcca tcgcgattgg ttgtttcgtt
      241 accatgcgtc gtataatagc aaaaagtgta tcagaaatcg gtacacctaa aattaaaatt
      301 ggtacgatta aagagataaa cgtaacattt ttgaatccca tcacggataa cacggaaata
      361 ataaaaccta agaaaagcgc gccagtgtcc cccatgaaaa tttttgcagg attaaaatta
      421 taaggtaaga aaccaagtgt cccagcgatt aacacacttg ctatcataat tactagtgca
      481 tctcccataa taaacgccat tcctaaaata gtgagtaagg caatggttga aacacctgcg
      541 gcaagaccgt ccagtccatc aattagattt atagcgttcg taatggctac aatccaaata
      601 attgtgagtg ggatacttaa caccccaaaa tggatttccc caccgaatgg taagttgata
      661 aagtcgatac taatgttacc ccaaaacaca ataataaagg cagcggtaac ttggccgatt
      721 aatttatatc ttgctttaaa ttccataata tcatctaata gcccagtcaa aaccatgaca
      781 aatgctgcaa tcagaagcgg ccataagaat tcgttttcaa ttgggagtaa aaacattccg
      841 atagtaaaac tgataaacat tgctagtcca cctaaactcg gaattggttt aatattaata
      901 cgacgttggt ctggtttatc tgtaatatca aagtatagag ctatttttcg aattagcggt
      961 gtaagtaata cggacgcgcc aaaacatatc aatataatca tccagctcat ggctagtcct
     1021 ccccgcaaat tttttactca tctcattata cttttttatt tgcaaaaaga caacgaaaat
     1081 cattatgcaa aaaagcttgg ggcagacaga ttccgcctca agcttttatt tattgtttaa
     1141 tcctagctac aaattgaaat ctactaccta catactggga acgcgtaaat tcaaatggtc
     1201 gaccgtcttc taacgttgta atctgcctga gtttcataac cggcgatccg agtttcacat
     1261 caagatatgg cgcaattttt tctgatacta aagaagcttc catgatttgt tccgcttctc
     1321 caattggttg accaagtttt aattcaatcg ctttataaag ggaatccata atgtcttcct
     1381 ttgtaagcag tgaagcaatt ttttctggaa tggcagcaac ttcataaaga attggcacac
     1441 ggtcgccgta acgaatccgt tcaattttca ttacattgct gttttctggc agttgcaacg
     1501 cttcttgttc ttgcgtactt gccggacgaa tgccatacga tacgattcgc gtcgaaggaa
     1561 ctttcccctc ttgtaacatc aaattcgtaa aactcgtaac agcttcaagt cgttcggtta
     1621 gtttcttttc cgcaataaag gtcccggcac caacacgtct ttgcaaaatg ttatcatcaa
     1681 cgaggccttg aatggcttgt cttaccgtca ttcggctaac gtgaaacatt tcagcaagtt
     1741 gacgttcagc tggaatagaa gtgccaactt tccaaacacc atcttccatt ttctttttaa
     1801 tttcactttg aatctgaatg taaatcggta ttcctgattg tttatcgatc attttcccgc
     1861 cctcttctta tagaagtgac gccgcctcgt tgtcaagaat cacagtaaca tctggatgat
     1921 tttgaagtac agaagcagga caattcacat ctacaggtcc tttaatagtt tctttgattg
     1981 cttgtgcttt gttttcacca aaagcaagta ggataatttt cttcgcattc atgatggatt
     2041 taattcccat agaataagca tgtgttggaa catcttcttc tctttcgaaa aagcgtttat
     2101 tagcttcacg agtggaatct gttaaaacaa ctttatgtgt taacgaatca aaaggagttc
     2161 ctggttcgtt aaaaccaata tggccgtttg ttccaattcc aagcacttga atatcaattg
     2221 ggtgctcaga taaaatttct tcataacgtg cgcattctgc ttctgcatcc gtcgcttctc
     2281 cgttaggtaa gaaactttct ttaaatgctt ttttagagaa taacaattcg ttcatatagt
     2341 aatgataact gtttgggtcg tttgccgcaa gacctacata ttcatctaag ttcgttgttg
     2401 tgacattttt tgtgtcaaca tcgcttttta caagctctgc ataaagtgtt tctggtgtgc
     2461 taccagttgc taggccaagt gtgtttactt cacctgatgt aattcctttt tcaatgattt
     2521 ctaatgcttt tttggatcct gctaatttat tttctgttgt gataagttgc attttattat
     2581 cttcctctca agaatgtttt tttccgaatg aataagttgc tgtaatgtgt aaatcttcgt
     2641 caagtaagtt gaaatctgca tccttaccag cctcgattgc acctttttgt gttaaattaa
     2701 attcgcgtgc ttggtttcca gaagacataa gaactgcctc ttctaccgag catccagtaa
     2761 atttaatcat gttgcggaag ccatcgtcat aagtgagtac acttccagct aaagttccat
     2821 cttctaaacg agcttgttta tctttcacga taacagtttg gccgccaagt tcagatttcc
     2881 cttctggcat accttttgct cgcatggagt cagtgataat gcataaatgt tctggccctt
     2941 tcatttgata agctaatttc accatatcag gatgaacgtg aatgccatca acgattagtt
     3001 ctgcattaat accgcgttct agtaaaacat gacctggaac gcctggctca cggtgcgtca
     3061 tacggtgaca agcattatat aaatgtgtcg cgtgtgtcgc tttacttgtt ttcaagtgct
     3121 cacgaacatc attagagtga ccaatactcg gaacaacccc tagttcaaaa cacaaatttt
     3181 caaaatcagc tgaagtatca tgttctggtg catatgttac taatttaatt aaaccaccag
     3241 aaatatcaaa ccactttttg aaaagttcca agtcaggtgc ttgaatatat tcttctggtt
     3301 gtgcgccttt aaagacttta gaaacaaatg gaccttccaa atgaattcca ccaataacag
     3361 gttctgtttg agcaacctca ttgatcactt ttaatgcttt ttcaatattt tcatgtgatt
     3421 gtgtcatcgt tgttgggaag taagtagtga ttccttcatt taacattccg ttcacttgtt
     3481 ttctaagtgc ttctggatct gcatccattg cgtcaaaact ataaccaccg tgggaatgaa
     3541 catcaatgaa acctggaaca agtttttgtc ctttggcatc gattacttct tctgctttgt
     3601 ccgcttggaa atcagccatc gagccaacct ctaaaatttg tttgtcaaaa cgtacgaaag
     3661 cattttctag aacaccttta ccagtataaa ttgtagcgtt agtaattact ttattagtca
     3721 ttacatattg cctccttgtt aaatcggtct ataccaatta ttatagcacg tatctattaa
     3781 aatgcaactt atcttttcct atttacccga aaaaaagtaa tataaccaaa aaagctacga
     3841 gcatatttag aaggcccata gcgttttgtt ataaaaaagc gcagaatgat tattctgcgc
     3901 taattacttt tatttatctg tttcgttttc ttcttctttt ttctctaatt ctggaattaa
     3961 tacttctttt tcttcttttg gtttttcttt tgcagcttct ttttcaagtt catttaattg
     4021 atcttccatc gaagcttttt ctggtttttt gaaattttgt ttttcgcgtt caataatttc
     4081 atctaccata gttgtaaagt tttgcgcttt atctttgatg atttctttgc ttttctttgt
     4141 tttcttttct agttcgtcca ttagatcatc aaaggattga gaaagttctt tgctcatatc
     4201 cgctttcttt tctgcttctt ccgctaaatc gcgttgtttt tgtgcttcat gatagtcact
     4261 aacactaccc cagctcatgt catggataac tttgtccatt ttttcggaag tttctgttgc
     4321 atttttttca gccatttcag ctaaatgttg ggttttaaga tttttccatt ttaagcgcat
     4381 ttcgtgcata cgtagttcta atttttcaag ctgttcggac gcttgatcgt aatgtgcttt
     4441 tgtagcttct aattgttctt catattgagc cacttcttct aaagcgaaat tagctagttt
     4501 tgtttcacca gcttctttgg cgatttctgc ttggtgacga cgtttttcaa cataaacttc
     4561 catttcttta tattccttgt agaaaagaga tttcagttcg cgttgttttt ctaccatgcg
     4621 ttctgcgtct ttcatttctt gttttgtttt atccatatag taacttactg aattgcgacg
     4681 tttttcttca cgtttctcga ttttttcact aacttcttta ttccattgtt tcattttttc
     4741 aaaaaggttt gccatttttt tctcctccaa ttatttattg tatgggtagt cgaatacgtc
     4801 atcatttttt cttggtttat ttttatttct agttaggaag taaatgattg ctccgataat
     4861 tacaacaacc agaattcctt ttaagttagc tagaattatt aaggcaccaa caccaattag
     4921 aataccataa ataacttttt cacctacgga ccttgcttca agtagcttct taagtgacca
     4981 aaagccgagc actgcaccaa ttgttgctag tatcgctggc aataaaacta taagtatcat
     5041 cgcaattagt aaaattatta atacgccaat caatattgct ctcatacgcc tacctcctaa
     5101 cttccaaatg tagctgatat attttctttt attactgtac ctatcataac cctatctatc
     5161 aagtataata acccgctgta gaaggaaatt cacctacaac ttgagtccta ttgtctaact
     5221 acaggataac ataatctact ataataagca gtgttttcta cataaaaaaa cagcttgttc
     5281 tcgcgtaaca caagatacaa actgcattct cattatttga ctttttcttc atattgaaga
     5341 gatgaaacgc caccttctga aatcatgtta ttttcttcca gttctgtttc agaaatttct
     5401 ttgtcagcgt aacgggtccg aatatcattt acctcatcaa aaggggtagg cggctgttgc
     5461 tttttaacca cgtatactac tgcacaagct aaaactccag cgacagctcc cacggctccg
     5521 gcaataattc ctactttatt tttcacacta tcaacctcct cttgaaatcc actattttat
     5581 tccctaaaaa agtagaagta aaacaaaaac gagcttgaaa agttcaaact cgtttcgaat
     5641 tataatccag aaaaagtgct cttcggtttg cggacaaaac aaagtatcgc aacaacaatg
     5701 aataataacg caggaatgaa actaattagt gctgtagaaa gcaacgatac aacgcctgct
     5761 gctaaaaata aatatcctgc aaaaactggt tttttatttt tgaatatgta gtaaatccca
     5821 aagataccaa gtgcgagcgt aattaagcct cctgttaatg cagtccaaga taatgtttgc
     5881 acaaaatcta gtacacgatc gggatcagga atctcttttt tcgggatctc ccattcattc
     5941 attgttttgt agtagttgtt gtagaaagtt gttaaacctt cttttccttt tgaaccactt
     6001 atcatcaata gaccaataat agcaataaat gcttgtgcga gtatacttaa aacaagacca
     6061 ataatagcga gtactatctc accagttcgt ttaatcatat gaatatgcct ccgtttcttc
     6121 gcttattttt ccagtatact atatgtgttc atgagatgaa accattaaat tagtagaaaa
     6181 agtagaccaa tcgtgcgttt tctataaaaa aaatgtataa tttgttcata acgaatttta
     6241 aaggggcgta aaataatgct aaagcgcgtg ttcttctcca ttatcttacc attaggttgt
     6301 ttagttggag caatttttat tttactgacg attaacacga cttatccaaa agcagccaat
     6361 gaatccatcc ctaccatttt tatacatggt tatcgtggga cagaccgctc gcttcacgga
     6421 atgatacgtc gctttgacca aaagtatgat tggggtacag agtcattgac cgtaaatgta
     6481 agcccagatg gaaaaatttc tactactgga acttataaca aaaaagaaaa aaatccactt
     6541 atcaacattg tttttgaaga taatcgagca acgcttcctc aacaatcaat gtggacaaaa
     6601 aaggtaatgt cttatttaca acaaaattat gccataaaaa aatttaatgc agtaggtcat
     6661 tcaatgggtg gcggtgcttg ggtttcttat ttagctagtt acgagaaaaa caagtcctat
     6721 ccacaagtaa ataaaattgt gtttcttgca gttccatttt atccggaaga atatgtgaat
     6781 ggcgatcagc aggttgatat taaaaatgcc aataatgtgc atgctaaatt tgctgagaaa
     6841 atggccaaag ttttacccaa caatactgaa attatgatta ttggtggtaa tttggaagat
     6901 ggttcaaata gtgatggtga agtgaaatta gatagtgttt tatatggtga aaaattattt
     6961 gcacatcaaa aggtaacgac acatgtcatt aaaggaccac aagctactca tagtagtatg
     7021 catgaatcta ctgtagtgga taagtatgtt ggtcaatttt tatggggcga gaaataaacg
     7081 attaaaggat gtttgaaatg aaaaaagtta ttagtttaat tatcgcatta gccattatca
     7141 ttactggctt ttggataatt tttcttcaat ttgagccgac taaaaaagaa gctaaagagc
     7201 ctgctgtgac agcaaataaa acaacaaaaa aagaacaaaa acctgtttca gaaatagcaa
     7261 tccctactct gtttgttcat gggtattctg gaacaattaa ttcattcgga ggtatgatta
     7321 atcgtcttgc tgaagacggg gatgtaacaa aatcacttgt tatgaatgtt gcagctgatg
     7381 ggactgtaag ctctgatgga aactatgata agtttagtca taaccctact attcaagtta
     7441 tttttgaaga taataaaagc tcagcggcaa atcaaacaca atggattcaa aatgtcatga
     7501 aagaattaaa aaataattat catatcgaaa aagtatacgc agttggtcat tccatgggtg
     7561 gcgttagttt aacaagttac attgaaaaag taggtagtga taaaacttat cctgttcttg
     7621 aaaaacttgt tttaatcggt gctccactta atggactagt aattggtgat gatggtgtta
     7681 cagcttacga ccttacagat tcagggccaa aaaaatcttc agaccgttat agtgaattca
     7741 tgaaaaacaa acaaaaaatc cctactaatt tgcacgtatt aaatattgca ggtgatactt
     7801 taaacggaac aaaaagcgat ggtagcgttt ctgttgcgag cgccttatct ggcaaattca
     7861 tttttgaagg ccaggcagca agttacgaag aaaaaacatt cacaggtaag aatgcagctc
     7921 atagtaaact ccacgaaaat accgatgttg atgctgaagt agctgacttt ttatggggaa
     7981 tagaaaaagt agattaaggc tatcgcctaa tctacttttt tcttgcgtcc aaatattgtt
     8041 cgttttttta agtcttctgc atttctcact tctaaaatat ctaataagaa tacaaagact
     8101 ggaattccta cgattagccc ccacactcca aagaatgttt ccgagaaaat caaaataata
     8161 aatgtgtaaa ataccggtaa gttcgtttta gatgacatta attttggatt taaaatgtag
     8221 gtctctattg catgaacaat gacaacggta attaaaatgt acaccacatc ttgaaatcct
     8281 ccaacagaat aagctataag caccagtgga atacaggaaa taatcacccc cgcaacgggg
     8341 attaatccta agacgaaaac cataatggat aaactaagca actgtggaaa gtccattaaa
     8401 taaagcgcga ttgtcgtaat aaatgtgttt actaaagcga tcattaattg cgcctctaaa
     8461 acgactccaa aagtcgaaac aaatttcttt ccaaaaaatg cagcctcttt aaaaataaag
     8521 cctaccttac ttgtcatgaa ctgcccagta aaagaagtta ctcgttcttt ttccaaagag
     8581 aaaaataaac taagaattaa tgctaagaag aaagataatc cgacagatcc aataccggat
     8641 agtgaagcaa taataaaatc gaccccagct tgcaaatatt tctgtatgtt agattctttt
     8701 aaaaacccaa caatccactt cacaatcgta ttgtcacttg gattattgta aagtttcaca
     8761 agagaatcta ctaattgaga aatttgatta attaaaattg gtaagaaatg cactatagcg
     8821 acatataaga atacagctac taatgaataa agtacaatga caattagctt tcttggtacg
     8881 cgcacccttt tcaaaataac attctctagt cgtgttacta aaaatgc
//
LOCUS       DASDYO010000123         8716 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.123, whole genome shotgun sequence.
ACCESSION   DASDYO010000123 DASDYO010000000
VERSION     DASDYO010000123.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8716)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8716)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8716
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.123"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..190
                     /locus_tag="U0290_002477"
     CDS             <1..190
                     /locus_tag="U0290_002477"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003769971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302511.1"
                     /translation="DGELDEDYYVALIKLDVEAFLYDKYDKETDLSDQLHDEAETLKE
                     YRLRLDDDGTYMVKEVAE"
     gene            190..375
                     /locus_tag="U0290_002478"
     CDS             190..375
                     /locus_tag="U0290_002478"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302512.1"
                     /translation="MCKFCNDDLKKRESVVDEMDPQDKIWLTSDKELVTNIVRNKEEY
                     SAYFNIKYCPVCGRSLE"
     gene            376..606
                     /locus_tag="U0290_002479"
     CDS             376..606
                     /locus_tag="U0290_002479"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302513.1"
                     /translation="MENARERKRMYEKETGEIQNRIDAFDRALEQAPNLDTKMEYMQT
                     INSLRELLIIKFEGLAIASDEIINELEEGINE"
     gene            599..808
                     /locus_tag="U0290_002480"
     CDS             599..808
                     /locus_tag="U0290_002480"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302514.1"
                     /translation="MSELTELKQTLKDLLEDLEIMKNADDQLIKLSGSTTSKSLNYLW
                     EDIRYTITQIKEINYKIQIMEEELK"
     gene            805..1326
                     /locus_tag="U0290_002481"
     CDS             805..1326
                     /locus_tag="U0290_002481"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302515.1"
                     /translation="MTKYYRIEKGTKAYEYLDKIYNQDTSAFLDEVTKLIGFDANGHI
                     GINREELIIKKSTLEELKPEWMHKFKRYQGEWMTPKVVLKELISSYAELRKKYNMDYE
                     FMYFCINNRLAGGVKVIYDFNSSGFTYLESNRDVENNDFDQVSEIKYLERKAELLAFE
                     IEQKKNMEQEVSK"
     gene            1323..1502
                     /locus_tag="U0290_002482"
     CDS             1323..1502
                     /locus_tag="U0290_002482"
                     /inference="COORDINATES: ab initio
                     prediction:GeneMarkS-2+"
                     /note="Derived by automated computational analysis using
                     gene prediction method: GeneMarkS-2+."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302516.1"
                     /translation="MIPPFKIAEDEFIAISTAEELLEYIQHANELVSVVRESRSKAYK
                     ELASRGLQPLKEVQE"
     gene            1499..1759
                     /locus_tag="U0290_002483"
     CDS             1499..1759
                     /locus_tag="U0290_002483"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734870.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302517.1"
                     /translation="MTNYHILLYAESGGVKILFNDYNKENITFDELKTSILKRLGNVD
                     SVNRINRDKVKVKQIITNSTSIKEMTEKINFETELRLDVREV"
     gene            1763..1936
                     /locus_tag="U0290_002484"
     CDS             1763..1936
                     /locus_tag="U0290_002484"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014930904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302518.1"
                     /translation="MTKQIIINEANSLLHRKSKELSKSIIKTPKDLERFAVGLDKLSQ
                     DMWDYKNELEAIK"
     gene            1933..2316
                     /locus_tag="U0290_002485"
     CDS             1933..2316
                     /locus_tag="U0290_002485"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743931.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302519.1"
                     /translation="MSIFAGDKIEVQDRSGVAELCVDGEQFHVLMNNGGLLTVEDEDG
                     FSSFNIPATQVKKVKVNSDVKLINELYGQSDAVSFSIYNADIDKAKLFVSNVNKPQFD
                     ERNNVKWYSASKGKITATAFLKGDD"
     gene            2318..2797
                     /locus_tag="U0290_002486"
     CDS             2318..2797
                     /locus_tag="U0290_002486"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731665.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="siphovirus Gp157 family protein"
                     /protein_id="HEM2302520.1"
                     /translation="MSTLYSIQGKYQQLLNLAEQLDPELLKDTLESIDDELETKAENV
                     AFVIKELEGQSLILEKETKRLAERKNTINNNVKRLKQSLFDAMITANKQKIKTNLFTL
                     DIRKNPPSLIVEDESKLLNYLIEQPKKLDKTKLGDDLKKGIEVPGAKIIQTERLQIR"
     gene            2810..3499
                     /locus_tag="U0290_002487"
     CDS             2810..3499
                     /locus_tag="U0290_002487"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991282.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2302521.1"
                     /translation="MEFIQSEKMKRSEYFNIMIYAKPGAGKTTTIKYLEGKTLMLDCD
                     GTSKVLSGLPNITIATLDPRNPVQDMADFYGYAKAHAEEYDNVVIDNLSHYQKLWLMF
                     NGRNTKSGQPELQHYGIFDTHLIDLISVFNNLPNTNIVYTAWENTRQIQMESGQLYNQ
                     FLPDIREKVVNHVMGIVPIVARLIRNPETGQRGFLLTENNGNFAKNQLDNREFALQED
                     LFQIGDVDVKA"
     gene            3563..4819
                     /locus_tag="U0290_002488"
     CDS             3563..4819
                     /locus_tag="U0290_002488"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929537.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DEAD/DEAH box helicase family protein"
                     /protein_id="HEM2302522.1"
                     /translation="MRCCSLWLGAGKSVILSEIIRMTTRNKNHVLFLVHRKELIDQIR
                     NTLIMNEVDMEFVKLGMVQTIVGRLNKTSEPSLIIIDESHHVLANSYKKIIHHFSNAK
                     VVGFTATPVRINGGGLGDINDMLIEKVNVKWLIENQFLAPYKYFAPEIVQTETLDIKR
                     TGEFDMTGLDDQFNKRMIWGDVIKHYQKLANGEQAILYASSLYQSEKMAMSFESVGIT
                     SAHIDGKTPKSIRDDIIQRFREGEIKVLCNLDLIGEGFDVPDCSTVIMLRPTQSLSLY
                     IQQSMRGMRYRTGKTAIIIDHVGNVNRFGLPDMERKWSLEPRKGSNSTKAEAPVKICK
                     ECFMTVSQTAKKCEHCGHEFKVEVKPMQVDEAAELQEITEAVFKVNYSSPSECTNMKE
                     LYEYAKEHNYKRGWAFHQGKARGFIK"
     gene            4842..5327
                     /locus_tag="U0290_002489"
     CDS             4842..5327
                     /locus_tag="U0290_002489"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011702027.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF669 domain-containing protein"
                     /protein_id="HEM2302523.1"
                     /translation="MFKVDHNDVFTNGVENGTYEVVLYNANEDATKNGAEFINIDLII
                     RNDVNQKFQNAHIFHRVWKAKATNEYSQTALNTIAKAIQLPNGKDYNTLDELLKDLLT
                     KTCQVTVKNEESEYNGQIYKNLNVKAWAESKITGPLQHVFKKKENELPPVEVNESNLP
                     F"
     gene            5350..7638
                     /locus_tag="U0290_002490"
     CDS             5350..7638
                     /locus_tag="U0290_002490"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581466.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA primase"
                     /protein_id="HEM2302524.1"
                     /translation="MYEQIPDELKKLKQWCAFQLVWDEERGKNKKIPMNANNGSYGNS
                     VDERTWADFETALDSLEKYQFDGLGFYFKKPYFGVDIDDIKDEIEDYLYGNTENIAGE
                     FIQTLSSYTEYSVSGTGIHIIAKGSFPEGGRRKGNIEMYPDGRFFVMTGQVIDNYRQV
                     NEATSAIQYLHTKYIGTNEVRQINNLQSTVDLPVSDIIQRAERSKQGAQFKTLYDGLW
                     DGLYPSQSEADLAFANMLAFWTGCNAEKMDEIFRSSGLYRTKWDQKRGAQLYGEMVIN
                     KAIANTSEVYQPGSDLEGYSITVKNQNRTARKVYGLDDTGNAERFRDKFHDIVRFSYI
                     NKGFYFYDSKVWKYDNIGAVKTLVDDVIKDMKSEFAYMENESDAEKAFMKHLKATRSN
                     KGKTNMLKEAQHLMPVLPDEFDRYKYFLNTQNGYINLQNGELINHDRQKMFTKISNIE
                     YTDKIDAPLWQAFLKDIFAGDKELIDYIQKAVGYSLSGSTSEQVMFILFGNGRNGKSV
                     FLDIINDIFGSYATNIQPQTIMVKQQSSNANSDIARLHGARFVTTTEPNEGVRLDEGL
                     VKQLTGGDKVTARHLYKDEFEFTPEFKIWMATNHKPIIRGRDDGIWRRLHLVPFTVKI
                     PDEKVDKQLKYKLRSELTGILNWAVEGFLKWQREGLGMPKAVEKASSEYKSEMDVITA
                     FIEDCCETGENKQINAKTLYETYREWARDNGQYLMSSTKFGKEMGLKFEKKRSNGQTA
                     YKCITLNKEYNPMNKPFFSTSY"
     gene            7972..8289
                     /locus_tag="U0290_002491"
     CDS             7972..8289
                     /locus_tag="U0290_002491"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601407.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VRR-NUC domain-containing protein"
                     /protein_id="HEM2302525.1"
                     /translation="MTAEMDIQNSIRLELSRHGHYVFRANVGKVKLPNGRIFDTGLPK
                     GFPDLFGFRGTDGKMFFIEVKNEIGKLRQEQKNFQQAMEITPAICGVARSAAEAVRIV
                     EEG"
     gene            8291..8503
                     /locus_tag="U0290_002492"
     CDS             8291..8503
                     /locus_tag="U0290_002492"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302526.1"
                     /translation="MKLRDITNSKCDVREYMNVDFPDWLLEQLKDEIDFDIIEALKEY
                     AVIYVKHNALEKEIEPFDIYKKVEEG"
BASE COUNT         3343 a         1271 c         1804 g         2298 t
ORIGIN      
        1 tgacggagaa cttgatgaag attactatgt tgcgttaata aagttagacg tagaagcatt
       61 cttatacgat aaatatgaca aagaaacaga tttgagtgat cagttacacg atgaagctga
      121 aacattgaaa gagtatcgtt tgagattaga tgatgacgga acttacatgg tgaaagaggt
      181 ggcggaataa tgtgtaaatt ttgcaacgat gatttgaaaa aacgagaaag cgttgttgat
      241 gaaatggatc cacaagataa aatttggctg acaagtgata aagaactcgt tactaacata
      301 gttagaaata aagaggagta ctcagcttat tttaatatca agtactgccc agtttgcgga
      361 aggagtttgg aataaatgga gaatgcacgt gaacgcaaaa gaatgtacga gaaagaaact
      421 ggggagattc aaaatcggat agacgcattt gatagggcgt tagaacaagc acccaaccta
      481 gatactaaaa tggaatatat gcaaactata aacagtctaa gggaactctt aataataaaa
      541 ttcgaaggac tagcaattgc gtcagatgaa atcataaatg aattagagga gggaataaat
      601 gagtgaatta actgaactaa aacagacact caaggattta ctcgaagact tggaaataat
      661 gaaaaacgca gatgaccaat taataaaact tagcggaagt actacgtcga aaagtctaaa
      721 ctatctatgg gaagacatca gatatacaat cacacaaatc aaagaaataa attataaaat
      781 acaaattatg gaggaggaac taaaatgaca aaatattatc ggattgaaaa aggtacaaaa
      841 gcatatgagt atttagacaa aatttacaat caagacacaa gcgctttttt agacgaggtc
      901 acaaaactta ttggatttga tgcgaacggt cacattggta tcaatcgtga agaattaata
      961 ataaaaaaat caactttgga agaattaaaa ccagaatgga tgcacaaatt caaaaggtat
     1021 cagggtgaat ggatgacacc gaaagtcgtg ctaaaggagt taatcagttc atatgcagaa
     1081 cttcgaaaaa aatacaatat ggattatgag ttcatgtatt tttgcataaa taaccgcttg
     1141 gcgggcggtg tcaaagttat ctacgatttt aattccagtg ggtttacata tttggaatct
     1201 aatagagatg tggaaaacaa tgattttgac caagtgtcag aaattaagta tctcgaaaga
     1261 aaagcagaac tcttagcttt tgaaattgaa caaaagaaaa acatggagca ggaggtaagc
     1321 aaatgattcc accattcaaa atcgcagagg acgaatttat agctatttct acagcagaag
     1381 aacttttaga gtatatccaa catgcaaacg agcttgtaag tgtagtaaga gaatcaagaa
     1441 gcaaagcgta caaagaatta gcaagtcgag gcttacagcc attgaaggag gtgcaagagt
     1501 gacaaactat catattttac tttacgcaga atcaggcgga gtcaaaatat tattcaatga
     1561 ttacaacaaa gaaaacatta cttttgatga acttaaaaca tcgatcctaa agcgattagg
     1621 caatgtggac tctgtgaatc gcatcaatag agataaagtt aaagtgaaac aaatcattac
     1681 aaattcaact tcaataaagg aaatgacaga aaaaatcaat ttcgaaacag agttacgtct
     1741 tgatgtaagg gaggtatgaa aaatgacaaa acaaatcatc atcaacgaag ctaacagttt
     1801 acttcacaga aaaagcaaag aactaagtaa atcaatcatc aaaacaccta aagatctcga
     1861 acgtttcgcg gttggactag ataaattatc acaagatatg tgggattata aaaatgaatt
     1921 ggaggcgatt aaatgagtat ttttgctggc gataagatag aggtacagga tcgaagtggt
     1981 gtagctgaat tgtgtgttga tggtgagcag tttcatgttc tgatgaataa tggtggtctg
     2041 ctaactgttg aagatgaaga cggattttca tcctttaaca taccagcaac ccaagtcaag
     2101 aaagtgaaag tgaatagtga tgttaaatta ataaatgagc tatatggcca atcagatgca
     2161 gtaagtttta gtatatataa tgcagatata gataaagcta agttgtttgt atctaatgta
     2221 aataagccac aatttgacga aagaaacaat gtgaagtggt attctgcatc aaaaggcaaa
     2281 ataacagcaa cagcattttt gaaaggagat gattaaaatg tcaacattat actcaattca
     2341 agggaaatat caacagttgt taaatctagc agaacagctt gatccagaat tactaaaaga
     2401 tacccttgaa agtatcgatg atgaactaga aacgaaagct gaaaacgtag catttgttat
     2461 taaagagcta gaaggtcaat cgctaatctt agaaaaagaa acaaagcgtt tagctgaacg
     2521 gaaaaatact attaataata atgtgaagcg actgaaacaa tcgttatttg atgcaatgat
     2581 aactgccaat aagcaaaaaa ttaaaacaaa cttattcaca ttagatatcc ggaagaaccc
     2641 gccaagcctc attgtagaag acgaaagcaa actgctgaat tacctgattg aacaaccaaa
     2701 aaaattagat aaaacaaaat taggcgatga tttgaagaaa ggtattgagg taccaggtgc
     2761 gaaaattatt caaacagaaa gattgcaaat aagataagga gggatttcat tggaatttat
     2821 tcaatcagaa aaaatgaaaa ggtcggagta ttttaatatt atgatttatg caaaaccggg
     2881 agcagggaaa acaacgacga ttaagtattt agaaggaaaa acattaatgt tggattgtga
     2941 tggtacgtcg aaagtattaa gtggattacc taatatcacg attgcgacat tagatcctcg
     3001 aaatcccgta caagatatgg ctgattttta tggatatgcg aaggcacatg cagaggaata
     3061 tgacaatgta gtaattgata atttaagcca ttatcaaaaa ttatggttaa tgtttaatgg
     3121 gagaaataca aaatcaggtc aaccagaact acaacactat ggaatatttg acacacattt
     3181 aatagatttg atttccgtgt ttaataattt accaaacaca aatatagtat atacagcttg
     3241 ggaaaacacg cgtcaaatac agatggaaag tgggcaactg tataatcaat ttttgcctga
     3301 cattagagaa aaggtagtta atcacgttat gggaattgtt cctatagtcg caagattaat
     3361 aagaaatcct gaaacaggtc agaggggttt cttactcaca gaaaacaatg gtaattttgc
     3421 aaaaaatcag ctagataata gagagtttgc cttgcaagaa gacctattcc aaataggtga
     3481 tgttgatgtt aaagcttaga gaatatcaac aagaaattat aaatgatgta aagggggctt
     3541 ttttacaggg atataacaga ccgtgcgttg ttgctccctg tggctaggcg ctggtaaatc
     3601 agttatttta tcagaaataa ttcgcatgac aacgcgcaat aaaaaccatg ttcttttcct
     3661 agttcaccga aaagagttga tagaccaaat cagaaacaca ctcattatga atgaagtgga
     3721 tatggaattt gtcaaattgg gtatggtaca aacgatagtt ggacgtttaa acaaaacttc
     3781 ggagccttcg ttaatcataa ttgatgaaag tcatcatgtg ttagcaaata gctataaaaa
     3841 aataattcat cacttttcta atgcgaaagt ggtcggattt acagcaacac cagtgagaat
     3901 aaatgggggt ggtttaggag atataaacga tatgttaatc gaaaaggtta atgtgaaatg
     3961 gttaattgaa aatcaattct tagcacctta caaatatttt gctcccgaaa tcgttcaaac
     4021 agaaacatta gatatcaaac gaactggtga atttgacatg acaggacttg atgatcaatt
     4081 caataaaaga atgatttggg gcgatgtcat caaacattat caaaagttag caaacggaga
     4141 acaagcaata ctttatgcct cttctcttta tcaaagcgaa aaaatggcaa tgagttttga
     4201 atcagtaggc attacatccg cacatattga cgggaaaaca cctaaatcca ttcgtgatga
     4261 cattatacaa cgatttcgag aaggcgaaat aaaggtgctt tgcaacttag atttaattgg
     4321 tgaaggattc gatgttccag actgttctac tgtgattatg ctaagaccaa ctcaatctct
     4381 atccctgtat attcagcaat caatgcgagg tatgcgatac cgaactggta aaacagctat
     4441 tattattgac cacgttggaa atgtcaatcg ctttggtttg ccagacatgg aacgaaaatg
     4501 gtccttagaa cctcgtaaag gaagtaactc cacgaaagct gaggcacctg tgaaaatttg
     4561 caaagagtgt tttatgacag ttagccagac agcaaaaaaa tgtgaacatt gtggacatga
     4621 attcaaagta gaagtaaaac caatgcaagt tgatgaggca gcagagctac aagaaataac
     4681 agaagcagtt tttaaagtga attatagtag tccaagcgaa tgtacgaaca tgaaagaatt
     4741 atatgaatat gcaaaagaac acaattataa aagaggatgg gcattccatc aaggaaaagc
     4801 aagaggattt atcaaataaa aacgaaagaa ggaatttaaa aatgtttaaa gtagatcata
     4861 atgatgtttt cacaaatgga gtagaaaatg gtacgtatga ggtggtttta tacaacgcaa
     4921 atgaagatgc gacaaaaaac ggagcggagt tcattaatat tgatttaatt attcgtaatg
     4981 atgtaaatca aaaattccag aatgcgcata tttttcaccg agtatggaaa gcaaaagcaa
     5041 caaatgaata tagtcaaacg gcattaaata caatcgctaa agcaatccaa ttacctaacg
     5101 gcaaagatta taatacattg gatgaattat taaaagacct gttaactaag acatgccaag
     5161 ttactgtgaa aaatgaagag tctgagtata atggtcaaat ttataaaaat ttaaatgtga
     5221 aagcatgggc tgaaagtaaa attaccggac cattacaaca tgtatttaaa aagaaagaaa
     5281 atgaattacc accagtggaa gtaaacgaga gtaatctacc gttctaagca atgagaggag
     5341 cgcacaaacg tgtatgaaca aattccggac gaattaaaaa aattaaaaca atggtgcgct
     5401 tttcaacttg tttgggatga agagcgtggc aaaaacaaaa aaataccgat gaacgcaaac
     5461 aacggttcat acggtaatag tgtagacgag cggacatggg cagattttga aactgccctt
     5521 gattcccttg aaaaatatca atttgatggg ttaggttttt actttaagaa accatatttt
     5581 ggtgtggata ttgatgatat aaaggatgaa attgaagatt acctttatgg taatacagaa
     5641 aatattgctg gtgaatttat tcaaacactg tctagttaca cagaatacag tgtgagtggg
     5701 acaggaattc atattattgc aaaaggcagt tttccggaag gtggtcggcg taaaggaaac
     5761 atcgaaatgt acccggacgg tcgatttttc gttatgacag gtcaagtaat tgataactac
     5821 agacaagtca atgaagcgac gtctgcaata caatatttgc atacgaaata cattgggact
     5881 aatgaagtaa gacaaataaa taatttacaa tctacagttg atttgcctgt aagtgatatt
     5941 attcaacgtg ctgaacgaag taaacaaggc gcacaattta aaacacttta cgacggatta
     6001 tgggatggat tatatccctc acaatccgaa gcagacttag cttttgcaaa tatgctggca
     6061 ttttggacag gatgtaatgc agaaaaaatg gacgaaattt tccgttcaag tggtttgtat
     6121 cgaacaaaat gggaccaaaa acgtggagcg caattatatg gagaaatggt tattaataaa
     6181 gcgattgcca atacgtcaga ggtttatcaa ccaggaagtg atttagaagg ttactcgatc
     6241 actgtgaaaa atcagaatcg aactgctcga aaagtatatg gtttagatga tactggaaat
     6301 gcagaacgtt tccgtgataa atttcatgac attgttcgtt tttcatacat taacaaagga
     6361 ttctatttct acgattcgaa agtttggaaa tatgacaaca taggcgctgt aaaaacactt
     6421 gttgatgatg tgatcaaaga tatgaagagt gagtttgctt acatggaaaa tgaatcagat
     6481 gcagaaaaag catttatgaa acatttaaaa gcaacaagaa gcaacaaagg taaaacgaat
     6541 atgttaaaag aagcacaaca tttaatgcca gttttgcctg atgaattcga tcgctacaaa
     6601 tattttttga acacacaaaa cggatatatc aatttgcaaa atggagaact tatcaatcat
     6661 gacaggcaaa aaatgtttac aaaaattagc aacatcgaat atacagataa aattgatgcg
     6721 ccactttggc aagcgttttt aaaggatatt tttgctggtg ataaagagtt aatcgattat
     6781 attcaaaaag cagtcggtta ttcattatca ggatccacgt cagagcaagt catgtttatc
     6841 cttttcggca atgggcgaaa tgggaaatcg gtttttcttg atattatcaa cgatattttt
     6901 ggttcctatg cgaccaacat ccagccacag acaatcatgg tcaaacagca gtctagtaat
     6961 gcaaacagtg atattgcccg tttacatggc gccaggttcg ttacaaccac cgaaccaaat
     7021 gagggtgtac gtttagatga aggactagtt aaacagctca caggtggcga caaggtcact
     7081 gcacgacact tgtataagga cgaattcgag tttacacccg aattcaaaat ctggatggca
     7141 accaaccata aaccaattat ccgagggaga gacgatggaa tatggcgaag attacactta
     7201 gtaccgttta ccgtgaagat acccgatgaa aaggtagaca agcagttaaa gtataaactt
     7261 cgaagcgaac tcactggaat attgaattgg gcggtcgagg gctttcttaa atggcaacga
     7321 gaaggtttag gaatgccgaa agcagtagaa aaagcaagct ccgaatacaa gtcagaaatg
     7381 gacgttatca ctgcatttat tgaagactgt tgcgaaacag gcgagaacaa acagatcaat
     7441 gctaaaactc tctacgaaac atatagagag tgggcgagag acaatggaca gtatttaatg
     7501 agcagcacga aatttggtaa ggaaatgggt ttgaagtttg agaagaagag gagtaacgga
     7561 caaactgcat ataaatgcat aactttgaat aaagaataca atcctatgaa caaaccattc
     7621 ttttcaacaa gttattagca gtgcaggttc atctaaactt gcactgtgtg gaatgtattg
     7681 cagcagaacg agtttgacgg ttttagttag ttgacagtgc aggtttgcgc caaaatccat
     7741 aaacttctct ataaaaattt ttcctaggaa acttttctta ttttactact aacttgcact
     7801 attaataaaa aaagtattaa taaagtaagt gatagcaatg gatttgggac agtgcaggtt
     7861 tgaaccaact tgcactaaac ttgcactgac ctgcactgtt ttagctaata atttagcgat
     7921 ttttaatcaa cacataacat atgttcgtat ttttgaggaa ggagcaattc catgacagca
     7981 gaaatggata tacagaattc tatacgttta gaactttccc gccatgggca ttacgttttc
     8041 cgtgccaatg ttggcaaagt gaaattacca aacggacgaa tatttgatac aggattaccg
     8101 aaaggttttc cagatttatt cggatttcgc ggaacagatg gaaaaatgtt ttttattgaa
     8161 gtgaaaaatg agatagggaa gttacgacaa gaacagaaaa actttcaaca agcgatggaa
     8221 ataacgccag ctatctgtgg agtagcaaga agtgctgcag aagccgtgcg aattgtggag
     8281 gaggggtaaa atgaagctaa gagatattac aaacagtaaa tgcgatgtta gggagtatat
     8341 gaatgttgat tttccagatt ggcttttaga acaactaaag gacgaaatag attttgatat
     8401 tattgaggcg ttaaaagagt atgccgttat ctatgtgaag cataatgcgc tggaaaaaga
     8461 aatagaacct tttgatattt ataaaaaagt agaggagggg taaaaaatga agagcgacga
     8521 ttaaagatgt gatgaattta gagaccaagg cagtcaaaat caatggaaag actgcacggg
     8581 tttatcagaa gtgttaattg tgtatttatt aggaaatatt ctgacaatgg ttacaaaaaa
     8641 tatgtaaccc agagcgaaaa acgtaacttc caaaaatcgc atagtgtcag tagctagaca
     8701 cgtaaaagtt acaagt
//
LOCUS       DASDYO010000124         8349 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.124, whole genome shotgun sequence.
ACCESSION   DASDYO010000124 DASDYO010000000
VERSION     DASDYO010000124.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8349)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8349)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8349
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.124"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..640
                     /locus_tag="U0290_002493"
     CDS             <1..640
                     /locus_tag="U0290_002493"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463826.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="NADPH-dependent oxidoreductase"
                     /protein_id="HEM2302527.1"
                     /translation="ARSASSSHFVQSFSILEITDEKLRKELAEITNSASYVNQTGTFY
                     VFVGDLYRQSKLLLENNRTLDGLRNMESLLVSVIDATIAAQNMVIAAESLDLGICYIG
                     GIRNDIEKVAELLNLPPFTIPVFGLTVGVPEYKNQVKPRLLLENQVGENQYPHEQFTD
                     LKAYEELTKDYYALREKNQHQTSWGDKNVAFFEEIRRPEIAGFLKKQGFTLD"
     gene            851..1489
                     /locus_tag="U0290_002494"
     CDS             851..1489
                     /locus_tag="U0290_002494"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463827.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF998 domain-containing protein"
                     /protein_id="HEM2302528.1"
                     /translation="MKFLKKYGFYFLLLGVLSDFLTPYILGIFYPELNQMTRVMSVFG
                     DVASPVRGAFLVWSVVSGVFFVLALPAIYQSVVKTSRTLAILLASAIGLYGIGDCIFT
                     GLFSIDTEQASWTFSTWVHNIGSGLGYAGFLIFPLFLVILYRKTGDKTRSNIYLVLLI
                     VSLLSAGVYGLARIPAVNDLPVLDKIGFCQRISFFFNYLPIVVFGIDRIRKP"
     gene            complement(1494..3365)
                     /locus_tag="U0290_002495"
     CDS             complement(1494..3365)
                     /locus_tag="U0290_002495"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription antiterminator"
                     /protein_id="HEM2302529.1"
                     /translation="MTISERQRSLLEKLNDSQKTVTAKALSEMLGVSSKTVRNDIVQI
                     NQSFSSTIIASKAGKGYFLTPNEQLSQMNLTKNNENLHFELLRHFIEQDHTNFYDLAD
                     QFFISESTLSRIIKELNAVIAEKDESLCIIRKNNELLTEGGEEEKRRIFNLFLNQEIE
                     NHQLSLDKYADYFDYCNLKQLSELIIAYHKKNDFFMNDFSTISFILHIAVLIERISMG
                     SYIERTALLEQDKTSLEMAEHLTETLEEELHIDIPTQELSYIARLYSGKLTTTSTIDA
                     QVFGSVVTRLLEAVDQNFHIDFSADEKIATYLVAHISALYKRANHKQYLTNPLTEELK
                     NKFPFIYNVSVYASAFIQKELAITFPDDEIAYIALHFLSASETINHGKKRKILLVSPY
                     GAGSQRLIHNQLKKIADFSIDLLVSQSIFDIKQFTLDKEIHLIITAEPLNLTTDIPVY
                     HYDLLLTETDLQKIKHILETKPKADSISRKFFKKELFFPKQNFKSKEEVITFLCEQLT
                     AFDYCDSDYVSKVFEREQLSSTCYGNYYAIPHAIQRSAKKNAVAVCALDKPIDWGGNR
                     VKLVLLLTMKEERDNSFEELFGQLVTILNERSFVKKLAKQEDFQQFIELCEQKTLDS"
     gene            complement(3464..4777)
                     /locus_tag="U0290_002496"
     CDS             complement(3464..4777)
                     /locus_tag="U0290_002496"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2302530.1"
                     /translation="MRFNTISEKMDQYISPLANKLSQQRHLKATRDAFMSMLPITLFG
                     SIPIILKAAPVTDDTKNGFLLAWANFAEKYDLILNWISGITLGAMSLYICVGITYYLC
                     KHYHEDFLRPLMFSIAGFFMLVLNPIKMGWDGKEVDISFLDGRGILLSIFVAIVTVEG
                     YHWMRKKNVGRITMPDSVPASLSETFAALVPGIILMTFFSIIFIIFNLLDTTAIQFLY
                     EKMAPSFKAADSLPFTILSIFLVHLFWFFGVHDAALAGILGPIRDGNLSINAAEKMAG
                     QDLTNIFTTPFWTYFVIIGGSGSVLALAFLMMRSKSKQLSTVGKVGFLPSIFGISEPL
                     IFGTPLMLNPIFFFPFIFTSVFNGVITYLCMYFGIVGKTFAVFSWQMPAPIGAFLSTM
                     DWRAIVLVFILIFLNGLMYYPFLKVYEKNLVALEKEAEEENIAAN"
     gene            complement(4782..5072)
                     /locus_tag="U0290_002497"
     CDS             complement(4782..5072)
                     /locus_tag="U0290_002497"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2302531.1"
                     /translation="MKNIMLVCNAGMSTGMLAKKIEAASGNTLNVTAYSESEYTDYLD
                     GFDLVLIGPQIRFLMPQIKQAVSVPVHAISPVKYGIMDGKGVYEDIQKLIGG"
     gene            complement(5089..6480)
                     /locus_tag="U0290_002498"
     CDS             complement(5089..6480)
                     /locus_tag="U0290_002498"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2302532.1"
                     /translation="MNNNFLWGGATASYQCEGAWDVDGKAESMWDYYLHEAGLENGDV
                     ASDHYHRYEEDIRMMKEGGQNSYRFSLSWPRIIKNRQGDINLKGIEFYQNLLDTCKKY
                     DIEPFVTLYHWDLPQYWEETGGWLDHDVCAAFEHYAKVCYDHFGDKITNWTTFNEPKW
                     FVANGYKIGNYPPGYQDTQKTMIAAYNVMYASALGVKAFKEGGYPGQIGIVHSYTPVN
                     GVDESIETKIAMRYADNYCNNWILDTAALGEFPVDLIAELAKSHDISFMKTDELQTIK
                     QNTVDFIGLNYYSRTLVKPYTGGETQLQFNHSGKKGESKVLIKNWFEQVKDPANETTE
                     WDTEIYPKGLQDGLIEAYERYQLPLYVTENGIGVREDVSVAKVDDAYRIAFMNDHINA
                     IFNAIDAGCDVRGYYAWSPFDLYSWKNGVEKRYGLVAVDFKNNQIRKPKASYYWFKEM
                     IESQGKLIKRREF"
     gene            complement(6473..6814)
                     /locus_tag="U0290_002499"
     CDS             complement(6473..6814)
                     /locus_tag="U0290_002499"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS lactose/cellobiose transporter subunit IIA"
                     /protein_id="HEM2302533.1"
                     /translation="MTDSNELTTELDSMAIILHAGNAKSCAFEALKEVKLQNIEAFTQ
                     KITEAKDEIKLAHRAHAELLRKLSSENRMREVDLLLVHAEGHLSSTDIAVEMIRELGE
                     IYQWKWSLSNE"
     gene            6981..7265
                     /locus_tag="U0290_002500"
     CDS             6981..7265
                     /locus_tag="U0290_002500"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463833.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302534.1"
                     /translation="MKKTVHGWEIISNLDIRLYQDEAGGVVILLDKDGFGDQVPVLLN
                     FDDDGVDIKALSHLTKSVRVLLDKKVRIEWHDEYFEERTQAMEYIEVERD"
     gene            7301..7855
                     /locus_tag="U0290_002501"
     CDS             7301..7855
                     /locus_tag="U0290_002501"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302535.1"
                     /translation="MSKKLVSIIFLGICLLLVGCGKEVVDSKYTGKWKLESSGIGMSD
                     GSNYKETDAAGKVSLDLDIDAEGNVKELYIDDAVAITNSYKLKKKGDDEYQYDGTLIS
                     KKVYSYETESDKENVETMLKFLKSKNNVKITKNEQKGDEYHIDVKADEKDFVFSLEMQ
                     SGKLIFKKVDTKEKVLIKETYKKN"
     gene            8061..>8349
                     /locus_tag="U0290_002502"
     CDS             8061..>8349
                     /locus_tag="U0290_002502"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3578 domain-containing protein"
                     /protein_id="HEM2302536.1"
                     /translation="MNLVALLKYMQENYGEQRTNYPMAGNEVAKKFKQGVKTAFETTL
                     LGEDYEISASIGTGGWANVPWIAVHDKEISTSVQEGVNLVYLFTNDYQGVYL"
BASE COUNT         2436 a         1405 c         1853 g         2655 t
ORIGIN      
        1 tgcgagaagt gcatctagtt cgcattttgt gcaatctttt tctattttag aaatcacaga
       61 tgaaaaacta agaaaggaac tagctgaaat tacaaatagt gcttcttatg taaatcaaac
      121 ggggaccttt tatgtgtttg taggggattt ataccgacaa tcaaaacttt tactggagaa
      181 taatagaact ttagatgggt tgagaaatat ggaatcatta ctcgtctcgg tgatagatgc
      241 tacaattgca gctcaaaata tggttattgc tgctgagtct cttgatttag gaatctgtta
      301 tatcggtgga ataagaaatg atattgaaaa agtagctgaa ttgctaaact taccaccatt
      361 tacgatacct gttttcggat taactgtagg cgttccagaa tataaaaatc aagtaaaacc
      421 acggctatta ctagaaaatc aagtaggaga aaatcaatat ccacatgaac aatttacgga
      481 tttaaaagcg tatgaggaat tgaccaaaga ttattatgct ttacgtgaaa aaaatcagca
      541 tcaaacttca tggggagaca agaatgtagc gttttttgaa gaaatacgaa gaccagaaat
      601 agctggcttt ttgaaaaaac aagggtttac attggattaa ttaattttcg ttgtagggcg
      661 tataaaaaat aatagtatta aatttatgag aggctggaag agtatttttt ccggcttttt
      721 atttgattgg ggctattatt ttgtcataga aagcttaaac tagattagat ggggatagat
      781 ttgtataatt aatatggagt taaaattaca ctaatatatc caaaataaat ttcataaaag
      841 gaggatccaa atgaaatttc taaaaaaata cggcttttac tttttattac tcggcgtttt
      901 gagtgatttt ctaacgcctt acatacttgg aattttttac ccagaattaa atcaaatgac
      961 gcgggttatg agtgtgtttg gggatgtggc tagtccggtg cggggagcgt ttttggtttg
     1021 gtcggtggtg tctggggtgt tttttgtgct cgctttgccg gcgatttatc agagcgttgt
     1081 taaaacttcg cggactttgg cgattttgct tgcttctgcg attggtttgt atgggattgg
     1141 cgattgtatt tttaccgggt tgtttagtat tgacacggag caggcgagtt ggacattttc
     1201 gacttgggtg cataatattg gctcggggct cggttatgcg ggatttttga tttttccgtt
     1261 gtttctggtc attctttacc ggaaaactgg cgataaaacc cgcagcaata tctatctagt
     1321 tttactcatt gttagtttgc tgtcggctgg tgtttatggg cttgcgcgga ttcctgctgt
     1381 gaatgacttg ccggttttag ataaaattgg tttttgtcag cggattagtt tcttttttaa
     1441 ttacttaccg attgttgttt ttggaattga tcggattaga aaaccctaga ttttcaggaa
     1501 tctagggttt tttgttcgca aagttcgata aattgctgga agtcttcttg ttttgctagt
     1561 tttttgacga agctgcgttc gtttaagatg gttacgagtt ggccgaataa ttcttcaaaa
     1621 gagttgtcgc gttcttcttt catagtgagt aataggacga gtttgacgcg atttcctccc
     1681 cagtcgattg gtttatcaag tgcgcatacg gcgacggcat ttttcttcgc gcttcgctgg
     1741 atggcgtgcg ggatggcgta gtagttgccg taacaggtgc tagataattg ttcgcgctca
     1801 aacacttttg aaacatagtc ggagtcgcag tagtcgaatg cagttaactg ttcgcaaaga
     1861 aacgtaatta cttcttcttt tgatttgaag ttttgttttg ggaagaacag ctcttttttg
     1921 aaaaattttc tggaaatcga atcggctttg ggcttagttt ctaaaatgtg cttgattttc
     1981 tgcaaatctg tttctgttaa aagtaaatcg taatgataga ctgggatgtc agttgttagg
     2041 tttaatggtt cggcggtgat aattaaatgg atttctttgt ctaaggtgaa ctgctttata
     2101 tcaaaaatag attgagaaac gagcaagtca atcgaaaaat cggcaatttt cttaagttga
     2161 ttatgaatta aacgttggct acctgcgccg tacggtgaaa ccaagaggat ttttcttttt
     2221 ttaccgtgat taatcgtttc cgaagcggat aaaaaatgta gcgcgatata agcgatttcg
     2281 tcatctggga aagtgatcgc aagctctttt tgaataaagg cagaggcata aacactgaca
     2341 ttataaataa atgggaactt gttttttaat tcttcagtga gtgggttggt taaatattgt
     2401 ttgtgattgg ctcttttata aagggctgaa atgtgagcca ctagataggt ggctattttt
     2461 tcgtcagctg aaaagtcaat atggaaattt tggtccactg cttcaaggag ccgagtgaca
     2521 acgctgccaa aaacttgtgc gtcaatggtt gaagttgtcg ttagtttgcc ggaataaagc
     2581 cgggcgatat agcttagttc ttgggttgga atatcgatgt gcagttcttc ttctaacgtt
     2641 tcggttaggt gctccgccat ttcaaggcta gttttatctt gctcgagtaa agcggttcgc
     2701 tctatatagc tgcccatact aatgcgctca attaaaacgg cgatatgcaa gatgaacgaa
     2761 atcgttgaga aatcattcat aaaaaaatcg ttctttttgt ggtaggcaat aataagctcg
     2821 gaaagttgct ttagattgca ataatcaaag taatcggcgt atttatctag gcttaattga
     2881 tggttttcga tttcctgatt gaggaataga ttgaagatgc ggcgcttttc ttcttcgccg
     2941 ccctcggtta gtagttcgtt gttttttcga ataatacata gcgactcatc tttttcagcg
     3001 ataaccgcgt tgagctcttt aataatacga gataacgtcg attcgctaat gaaaaattgg
     3061 tccgctaagt catagaaatt agtatgatct tgttcgataa aatggcgtaa taattcaaaa
     3121 tgtagatttt cgttattttt ggttagattc atttgtgaaa gctgctcgtt tggtgttaga
     3181 aagtagcctt ttccagcttt tgatgcgatg attgtggaac taaatgactg gttaatttgc
     3241 acaatgtcat ttcgcacagt tttggaagaa acgcctaaca tttctgaaag tgcttttgct
     3301 gttactgtct tttggctgtc gttaagcttt tctaacaatg aacgttgcct ttctgaaata
     3361 gtcattatat cccccctaat tctcccttaa cctattgtta ttatacaaca ccaaatagag
     3421 aaagagacga gtttttttgt cccaatctct atttaagtgg ctattaatta gcagcgatgt
     3481 tttcttcttc ggcttctttt tctaaagcga caaggttttt ctcatacact tttaggaatg
     3541 ggtagtacat taggccgttt aagaaaatca ggatgaatac gagaacgatg gctcgccagt
     3601 ccatggtgga tagaaatgct ccaattggtg cgggcatttg ccaggagaag acggcgaacg
     3661 tttttccgac aatcccgaaa tacatacaaa gatacgtgat gacaccattg aatacggatg
     3721 tgaaaatgaa cgggaagaag aaaatcggat tcagcattag tggtgttccg aaaattagcg
     3781 gctcagaaat tccgaatatg gaaggtaaga agccgacttt cccgacggtg cttagttgtt
     3841 tggacttgga tcgcatcatt aaaaaggcaa gtgcgagaac ggaaccagaa ccaccgatga
     3901 taacgaaata tgtccagaat ggtgtcgtga aaatattcgt caaatcttga ccagccattt
     3961 tttcagcggc gttgattgaa aggtttccgt cacgaattgg gcctagaatt ccggcaagtg
     4021 cggcatcgtg gacaccgaag aaccagaata agtgaactag gaaaatactt agaatcgtga
     4081 atggtaagct atcggctgct ttgaagctcg gcgccatttt ttcatataag aattggatgg
     4141 cagttgtgtc tagtaggttg aaaatgataa agataatcga gaaaaaggtc attaaaataa
     4201 taccaggaac taaggctgcg aatgtctcgg atagtgaggc tggaacgcta tcgggcatgg
     4261 ttattcgacc gacatttttc ttgcgcatcc agtgataacc ttctacggta acgatggcga
     4321 cgaaaatcga gagtaatatt ccgcgtccat caaggaaact aatgtcgact tctttgccgt
     4381 cccaacccat tttgattggg ttaagtacga gcataaagaa accggcgata gaaaacatga
     4441 gtgggcgtaa gaaatcttcg tggtagtgtt tgcataaata atacgtgata ccgacgcaaa
     4501 tatataacga catggcgcca agtgtgattc cgctaatcca atttaggatt aaatcatatt
     4561 tttcagcaaa gttagcccaa gcaagcagga aaccattttt cgtatcatct gtgactggag
     4621 ccgctttcaa aataatcgga attgaaccaa acaatgtaat tggcagcatg gacataaagg
     4681 catctctggt tgctttcaaa tggcgttgct ggctaagttt gttagccagc ggggaaatat
     4741 attgatccat tttttcgcta atggtattaa atcgcatgtt tttatcctcc tattaatttc
     4801 tggatgtctt cgtaaacccc tttgccatcc atgatgccgt attttacggg tgaaatggca
     4861 tggactggga cgctgacggc ctgtttaatt tgtggcataa ggaaacggat ttgaggcccg
     4921 ataagaacga ggtcgaaacc gtccaaataa tcggtatact cggattcgct ataagcagtg
     4981 acgtttaatg tgttgccaga agcggcttct atttttttcg caagcattcc tgtagacata
     5041 ccagcattac aaactaacat gatatttttc attttcctgc tccttttttt aaaattctct
     5101 tcgtttgatg agttttccct gactttcaat catttctttg aaccagtagt aggaagcttt
     5161 tggttttctg atttggttgt ttttgaaatc aactgctaca agtccgtaac gcttttcgac
     5221 accatttttc caagagtaaa ggtcgaacgg ggaccaagcg tagtagccgc gaacgtcaca
     5281 accagcatcg attgcgttga aaatggcgtt aatatggtcg ttcataaagg cgattcggta
     5341 ggcatcatct acttttgcca ctgaaacatc ttcgcgaaca ccaatgccgt tttctgtcac
     5401 ataaagtggt aattgatagc gttcgtaagc ctcgattaag ccatcttgta agccttttgg
     5461 ataaatttct gtgtcccatt cggttgtttc gttggcggga tctttcactt gttcgaacca
     5521 gtttttgatg agaactttac tttcgccttt tttaccgctg tggttgaatt gtagttgggt
     5581 ttcgccgcca gtgtatggtt taacgagcgt gcgcgaatag taatttaagc cgatgaagtc
     5641 gacagtgttt tgtttaattg tttgtagttc gtctgttttc ataaagctga tgtcgtgcga
     5701 ttttgctagt tcggcaatga ggtcgaccgg gaattcgcca agtgcggctg tgtcgagaat
     5761 ccagttgttg caatagttat cagcgtagcg catcgcgatt ttcgtttcga tactttcatc
     5821 gacaccgttc accggcgtgt agctgtgaac aataccaatt tgccctgggt agccaccttc
     5881 tttaaaagcc ttcacgccta aagcactcgc gtacattaca ttataagcgg caatcatcgt
     5941 tttttgcgta tcttgataac cgggcgggta gttgccgatt ttatatccgt tagcaacaaa
     6001 ccatttcggc tcgttaaacg tagtccaatt cgtgatttta tcgccaaaat ggtcataaca
     6061 aaccttggca taatgctcaa atgcggcgca aacatcgtga tccaaccagc caccagtttc
     6121 ttcccaatat tgcggcaaat cccaatgata aagtgtcaca aacggctcaa tatcatattt
     6181 tttacacgta tctagcaagt tttggtaaaa ttcgatccct tttaagttga tgtcaccttg
     6241 cctattttta ataatccgcg gccaagataa ggaaaaacga taggaatttt gcccgccttc
     6301 tttcatcatc cgaatgtctt cctcgtagcg gtggtagtga tcgctcgcca catcgccatt
     6361 ctcaagaccc gcttcgtgca agtagtagtc ccacatcgat tccgccttgc catccacatc
     6421 ccaagcacct tcacattgat aagaggccgt tgcacctccc cataaaaagt tattattcat
     6481 tagataaact ccatttccat tgataaattt ctcccagttc ccgaatcatt tccacggcaa
     6541 tatccgtaga agacaagtga ccctccgcat gaacaagcag taaatccacc tctctcattc
     6601 ggttctctga agatagtttt cgtaaaagtt ccgcgtgcgc tcggtgcgcc agtttaatct
     6661 catctttcgc ttcagtaatt ttctgcgtga aagcttcgat gttttgcagt tttacttctt
     6721 tcagtgcctc aaaagcacaa cttttcgcat tcccggcgtg taagatgatc gccatggaat
     6781 ccagttctgt tgttagttcg ttgctatctg tcacgtaaag acctcctttt gatttgtctt
     6841 tactatagct ggaaaaatgg gggaggtgaa attattattt gccactttgg aagtggaaat
     6901 tggtttaggt ttggaaatta ttgattacta ggatatgatg atagttagag agaaaatatg
     6961 acataggaga tgaataaatg atgaaaaaaa cagtacacgg gtgggaaata atatctaatt
     7021 tagacatacg attataccaa gatgaagctg gtggggttgt gattttacta gataaagatg
     7081 gttttggtga tcaagtgcca gtgctattga attttgatga tgatggagta gatataaaag
     7141 ctctttcgca tttaacaaaa agtgttcgag ttttgctgga taagaaggtg cggattgaat
     7201 ggcatgatga gtattttgaa gagagaacgc aagcaatgga gtacatcgag gtggaacggg
     7261 attaaccgtt aattatatac aaaaaaagga gagcaacaag atgagcaaaa agttagtaag
     7321 tattattttc ttagggattt gtcttttgtt agttggttgt ggtaaagagg ttgttgatag
     7381 taagtatacc ggaaaatgga agttggaatc gtcggggatt ggtatgagcg atggatcaaa
     7441 ttacaaggaa acggatgcag cgggtaaagt tagtcttgac ttggacattg atgcagaggg
     7501 aaatgtaaaa gaattgtata ttgatgatgc agttgctata actaattctt ataaattaaa
     7561 gaaaaaaggt gacgatgaat atcaatatga tggtacattg attagcaaaa aagtatacag
     7621 ttatgaaact gaaagtgata aagagaatgt agaaacaatg ctaaaatttc ttaaatccaa
     7681 gaataatgtc aaaataacca aaaatgaaca aaaaggggat gaatatcaca tagatgtcaa
     7741 agcagatgaa aaagatttcg tattctcttt agaaatgcaa agtggaaaat taattttcaa
     7801 aaaagtcgat actaaagaga aagttttgat taaggaaacc tacaagaaaa attaaattat
     7861 tagaagcgag aagcggaagt ccgttgtaac cacctatttt ttaaaattta tttgtgaaga
     7921 ctattctttc gagggtcctc gggaggatag tttttttgtt gaacaagcat attttatagt
     7981 taaattcaca acaaatctac attcttaggt ataatgtata cgagaagatg aaaatacatt
     8041 atataaaaag gatgtttgtg atgaacttag tggcattatt aaaatacatg caagaaaact
     8101 atggggagca aagaaccaat tatccaatgg ctgggaatga agtcgcaaaa aaatttaagc
     8161 aaggtgttaa aacagccttt gaaaccacct tattaggaga agattacgaa atatctgcat
     8221 ccattggtac aggcggttgg gcaaatgtcc cttggatagc tgtgcatgat aaagaaatta
     8281 gcacaagtgt acaagaggga gttaatctag tttatttgtt tacaaacgat taccaaggtg
     8341 tttatttat
//
LOCUS       DASDYO010000125         8275 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.125, whole genome shotgun sequence.
ACCESSION   DASDYO010000125 DASDYO010000000
VERSION     DASDYO010000125.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8275)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8275)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8275
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.125"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            22..912
                     /locus_tag="U0290_002503"
     CDS             22..912
                     /locus_tag="U0290_002503"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727177.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2302537.1"
                     /translation="MIKGIHHVSALTKSFSENHHFYSDILGLRLVKNTVNQDNIHMRH
                     LFYGDYTGSPGTLLTFFEVPRIGSSYNERAFFGNITLGIPKGTSSYWKKRLNDFAISF
                     QKEGQTLTLQDPDTMGIILTEIPETISNPIIHTDIPSEKQIVRIIGADYHVPNPAATS
                     QFFTDLFGLESQNGVLVDKDKTSFAKLHATSSDKKSRTGRGTIDHIAYTVETKEAVDE
                     LHDIAVRNDLKIEEFVDREYFKSLYIREPGGLRIEFASAGPGFTIDEPLETMGDNLAL
                     PSFLEEKRTEIETYFGGDLS"
     gene            909..1868
                     /locus_tag="U0290_002504"
     CDS             909..1868
                     /locus_tag="U0290_002504"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464286.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ring-cleaving dioxygenase"
                     /protein_id="HEM2302538.1"
                     /translation="MIKDLKGIHHVTAMTSSAEKNYAFFTEVLGMRLVKKTVNQDDIH
                     TYHLFFADDKGSAGTDMTFFDFPNLPKGRHGTDSISRVAFRVPSDAALEYWLDRFEQL
                     EVPHSDIKTLFGKKYLTFQDFDDQQLQLISDENNEGVAAGTPWKNGPVPEKYAIYGLG
                     PVFLTVVSLKNMDAILQTIFGFRKVTEEDGLHLYEVGEGGNGAQVIVEERTDIPAAMQ
                     GYGGVHHVAFRVEDHEELQKWIDRMNTIEAPNSGYVNRFYFESLYVPVSERILFEFAT
                     DGPGFASDEPYETLGEKLALPPFLEPKRAEIEKMVRPINTKRS"
     gene            1875..2483
                     /locus_tag="U0290_002505"
     CDS             1875..2483
                     /locus_tag="U0290_002505"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464287.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alpha/beta hydrolase"
                     /protein_id="HEM2302539.1"
                     /translation="MEHIYIPGKNKDLAPLLLLHGTGGDEKSLVEVAEFIAGDAAVLS
                     LRGDIKEGGANRFFKRFHDGSLDLEDLESKTAELITTTRELAEKYQLDFERMIAVGYS
                     NGANIAANALLQAEDSFHKAILFHAMPAGNKQPEFSISHRNVFLSAGLNDPLITAKAS
                     EELVEILEKRGAKVETVWTAAGHSLTMEELEEAKKWYQNNQK"
     gene            2493..3113
                     /locus_tag="U0290_002506"
     CDS             2493..3113
                     /locus_tag="U0290_002506"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin reductase family protein"
                     /protein_id="HEM2302540.1"
                     /translation="MTIFKSADLSQKENYKFLTGSIIPRPIAFVTTLAEDGETVNAAP
                     FSFFNVVSSDPAIVSIAVQRANGEQKDTARNAAFTKELNIHIVSESFVEEMNKTAARL
                     APDVSEIDTTSLHLEKVPGMKTPKISEANIVLTAKLEQIIPIKNDAGEVVSDLILARI
                     LTYDFADEVFDSEHHYILPEKLEPVARLAGNDYTKLGDIFRIERPI"
     gene            3441..4697
                     /gene="hflX"
                     /locus_tag="U0290_002507"
     CDS             3441..4697
                     /gene="hflX"
                     /locus_tag="U0290_002507"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464289.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase HflX"
                     /protein_id="HEM2302541.1"
                     /translation="MEKKVLIVGISQKQKDFDYSMEELANLAAANNMEVVGEIRQNID
                     RENRATYVGKGKVDEIKGLAEMQDARLIIFNDELSPSQIRNLEEALELDVMDRTGLIL
                     AIFANRAKTKEAQLQVQIAKLQYELPRIFGQGEDMDQQSGKGGLSNRGSGEKKIETDR
                     RTIKYQIRHLQKELDMLVDDREVRRRKRKKNEIPVVSLVGYTNAGKSTTMNGLVRAYS
                     ETAEKQVFEKDMLFATLETSVREIVLPDNKQFLLTDTVGFVSKLPHQLVKAFRSTLEE
                     ARDADLLIHVVDYSDPHYKTMMKTTEETLKAVGVEDVPVIYAYNKADLIEGEIYPKQT
                     ENTIVFSAREKESLEFLTEVIRKELFASYEKATFLIPFEAGNVVAYLNDHADVLATEY
                     LENGTQIVAEVSPADLQKLAEYQVAE"
     gene            4763..5635
                     /locus_tag="U0290_002508"
     CDS             4763..5635
                     /locus_tag="U0290_002508"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464290.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="metallophosphoesterase"
                     /protein_id="HEM2302542.1"
                     /translation="MKKTGWGILGAVAAFTGYAYWSTKHLTVTDYEIVSDKIPAEWDG
                     ATFVQLSDLHSASFGLYNNPLLSIVNELAPDAVFLTGDMIDGDESPYVAMAVVRKLAK
                     EFPVFYVSGNHEGRSAFYEDFKADMEKHHVTVLENERYFLKKDGAAIMVAGVRDPRFV
                     RDDWAEKELPKEVWEEAALKEALDDATANLSPDYFTILLAHRPEFWPLYQAYPIDLVL
                     SGHAHGGQFRLPLTEGLFAPGQGLMPKWTAGIHRAGGKALIVSRGLGNVTKLPRLFND
                     PEIIRMTLRAKGDA"
     gene            5641..6630
                     /gene="lplA2"
                     /locus_tag="U0290_002509"
     CDS             5641..6630
                     /gene="lplA2"
                     /locus_tag="U0290_002509"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464291.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lipoate protein ligase LplA2"
                     /protein_id="HEM2302543.1"
                     /translation="MIYLDNEDVLDQAYNFAMEEYALRSLDENETYFMFYRMKPTIIV
                     GKNQNTLEEINHAFVKEHHIDVLRRLSGGGAVYNDEGNISFSMITKDDGNSFQNFAKF
                     TEPVIRALRKLGVNAELSGRNDIEVNGKKISGNAQFATKGRLYSHGTLLFDVDLSMLE
                     KALQVDPEKYLSKGVKSVRSRVTTIREHLAEDIDILTFKQILLESIFETKDIPRYTFT
                     EADKQGIEKLRTERYRNWDWTYGKSPKATIKRKKRFPAGTIEFQVSLEKGQVKEATIY
                     GDFFGTEDVAELAGKIIGCRFERKSIQNAWQEINAKDYFGGIEKEAILDMLFE"
     gene            6784..8082
                     /locus_tag="U0290_002510"
     CDS             6784..8082
                     /locus_tag="U0290_002510"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464292.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 125 protein"
                     /protein_id="HEM2302544.1"
                     /translation="MVIANRDFIQISTEKIKKEINNQKLVEMYKRCMENTLDTTIKIR
                     DSGLTFILTGDIPAMWLRDSVCQVRPFLIFAKENEEIESMLIGLSKEQVSLVEIDPYA
                     NAFNETPNGAGHQADKTEMHPQVWERKYEIDSLCYPIQLAYFIWKITGRTEQFDSAFF
                     KMLQTIFALWEVEQHHETKSPYRFERMDCVPSDTLKRNGLGTETAYTGMLWSGFRPSD
                     DACEYGYLIPSNMFAVVVLGYAKEIIEAFYPREIETIKQAVTLQNDIQLGIEKFGTYN
                     HPTFGEIFAFEVDGLGNQLLMDDANVPSLLSMPIIEYLEKESPIYQNTRKFILSKSNP
                     YYFEGKLAKGIGSPHTPAGYIWPIGLAIQGLTASDKSEKLEILQMLLRTDAGTGLMHE
                     SFHPDYPEDFTREWFSWANMMFCELVLDVAGFRMANVLKN"
     gene            8099..>8275
                     /locus_tag="U0290_002511"
     CDS             8099..>8275
                     /locus_tag="U0290_002511"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2302545.1"
                     /translation="MATIRNKSAQIHQQRMAYLFIALPVLLLAIFMILPIGMALFVSF
                     TDYDIVNSPNWIGFD"
BASE COUNT         2780 a         1437 c         1787 g         2271 t
ORIGIN      
        1 tcaagaagga ggtacaaaca aatgattaaa ggcattcatc acgtatccgc gctaacgaaa
       61 tcatttagcg agaaccatca tttttattca gacatattag ggctacggct cgtaaaaaat
      121 acagtaaatc aagacaatat tcacatgcgt cacctatttt acggagacta tacaggaagc
      181 ccgggtacct tgttaacatt tttcgaagta cctcgtatcg gctcaagcta caacgaacgc
      241 gcctttttcg gaaacatcac ccttggaata ccaaaaggca caagctctta ctggaaaaaa
      301 aggctaaacg attttgcgat atctttccaa aaagaaggcc agactttaac cttacaagat
      361 cccgatacaa tgggtatcat cctaacggaa ataccagaaa ccatttctaa cccaatcatc
      421 cacactgata tcccgtctga aaagcaaatt gttcggatta tcggcgcaga ctatcacgtg
      481 ccaaatccgg ccgcgaccag ccagtttttc acggatttat ttggcttaga aagtcagaat
      541 ggggtattag tagataaaga caagacgagt tttgcgaaac ttcatgccac aagttcagac
      601 aaaaaatcgc gaacaggacg cgggacaatc gatcacattg cttataccgt tgaaaccaaa
      661 gaagccgttg atgaacttca cgatatagct gttcgaaacg atttgaaaat agaagaattt
      721 gttgaccgcg agtattttaa aagtctatat attcgcgaac caggtggctt aagaattgaa
      781 tttgcaagtg ctggccccgg ttttacaatt gacgaaccgc ttgaaacaat gggcgacaac
      841 ttagccttac caagcttttt agaagaaaaa agaacagaaa ttgaaactta ttttggagga
      901 gatttatcat gattaaagat ttaaaaggaa ttcaccacgt aacagcaatg acaagtagtg
      961 cggagaaaaa ttatgcgttt tttacagaag ttttaggaat gcgtttagtg aaaaaaaccg
     1021 tcaaccaaga cgatattcat acgtatcatt tgtttttcgc cgatgacaaa ggttcagcgg
     1081 gaacggatat gacatttttt gactttccaa atttaccaaa aggacgtcac ggcacagaca
     1141 gtatttctcg cgtagctttc cgagtaccta gtgatgcggc gcttgaatac tggcttgatc
     1201 gttttgaaca attagaagtt cctcatagtg atatcaaaac tctatttggc aaaaaatatc
     1261 tgacattcca agattttgac gaccaacaat tacaactgat ttcagatgaa aataacgaag
     1321 gggtagcagc tggaactcca tggaaaaacg gaccagtccc agaaaaatat gcaatttatg
     1381 gcttaggacc agtcttttta acggttgttt cgctcaaaaa tatggatgcg attttgcaaa
     1441 cgatttttgg ctttagaaaa gtgacagaag aagacggact tcatttatac gaggttggcg
     1501 aaggtggtaa tggggcgcaa gtgattgtcg aagaacgtac cgatattcca gctgcaatgc
     1561 aaggctacgg tggcgttcac catgtggctt ttcgagtaga agaccacgaa gaattgcaaa
     1621 aatggattga ccgcatgaat acaatcgaag cacccaactc tggctatgta aaccgcttct
     1681 actttgaatc attgtatgta cccgtttcag aacgaatttt gtttgaattc gcgacagatg
     1741 gtccgggctt tgcaagtgat gaaccatacg aaacactcgg tgaaaaatta gccttgcctc
     1801 catttttaga accaaaacgc gcagaaattg aaaaaatggt acgtccgatt aatacgaaac
     1861 ggagctgata aacgatggaa cacatttata ttccagggaa aaataaggat ttagccccac
     1921 tattactact tcacgggaca ggcggcgatg aaaagtcgct tgtcgaagtg gcggaattta
     1981 tcgcaggtga cgcggctgtt ttatcgttgc gcggtgatat taaagaaggc ggagcaaatc
     2041 ggtttttcaa aagatttcac gatggcagct tagatttaga agacttggaa agtaaaaccg
     2101 cagaattaat cactacaaca cgcgaactgg ctgaaaaata tcaattggat tttgaacgaa
     2161 tgattgcagt agggtattca aatggcgcaa acatcgcagc caacgcgcta ctacaagcag
     2221 aagatagttt ccataaagcg attttgtttc atgcgatgcc agctggaaat aaacaacccg
     2281 aattttcgat tagccaccgc aacgtatttc tgtccgctgg cttaaatgat ccacttatta
     2341 ccgcaaaagc ctccgaagaa ttggttgaaa tcctcgaaaa acggggcgcg aaagtcgaaa
     2401 cagtttggac agcggctggg cattctctta ctatggaaga acttgaagaa gcgaaaaaat
     2461 ggtatcaaaa caaccagaaa tgagggaagt agatgactat ttttaaaagt gctgatttat
     2521 ctcaaaaaga aaactacaaa tttttaacag gaagtattat tccacgacca attgcttttg
     2581 taacgacgct tgctgaagac ggggagacgg ttaacgccgc cccgttcagt ttttttaatg
     2641 ttgtttcaag cgatccagcg atagtttcga tagctgttca acgcgcgaat ggcgagcaaa
     2701 aagatacagc gaggaatgcg gcttttacga aagaattaaa tattcatatt gttagtgagt
     2761 cttttgtgga agaaatgaat aaaaccgccg ctcgactggc accagatgtg agcgaaatcg
     2821 atacaacaag cttgcattta gagaaagttc ctggaatgaa aacaccgaag atttccgagg
     2881 ccaatatcgt gcttacagct aaactagaac aaattattcc gattaaaaat gatgctggtg
     2941 aggttgtttc cgatttaatt ctggcacgta ttttgacata tgatttcgca gatgaagtgt
     3001 ttgattctga gcatcactat attttgccag aaaagcttga accagttgcc agactcgctg
     3061 gaaatgacta tacaaaactt ggcgatattt tccggattga aaggccaatt taacgagaaa
     3121 tagttgcgaa acaaaagcga ccatgttaaa ctaggggcaa cttaaatgaa cggagggttg
     3181 cccatcatgc gttatattag actacgtttc ccaaaaaatc tatgcaacta atttaatagt
     3241 gcgggaatat ccatgcttat ttagtatggg taacgggatt ggtcttgcgt gcatgtatgg
     3301 cacccaaaat aaatatgggt agaatgaagg tggaatgcgc ttcatttgaa agcaagctag
     3361 tatctttgga tgctattttt gtgttttctt ctactcaaaa accctgaccg cgctgaatct
     3421 atttcaggag gtcctttttt atggagaaaa aagtattaat cgttggtata agtcagaaac
     3481 aaaaagattt tgattattca atggaagaat tagccaattt agcggctgca aataatatgg
     3541 aagtagtggg cgaaatacgg caaaatatcg accgtgaaaa tcgcgctact tatgttggaa
     3601 aaggaaaagt ggatgaaatc aaagggctgg cagaaatgca agatgctcgc ttgattattt
     3661 ttaacgatga actttcaccg tcgcaaatta gaaacctaga agaagcgttg gaactggatg
     3721 taatggacag aacaggcttg attttagcta ttttcgcgaa ccgagcaaaa acaaaagaag
     3781 ctcaactcca agtccaaatc gccaaattac aatatgaact tccgcgaatt tttggacaag
     3841 gcgaagacat ggaccaacaa agcggaaaag gcggacttag caaccgtggt tcgggcgaaa
     3901 agaaaattga aaccgatcgc cgtaccatca aataccaaat ccgccattta caaaaagagt
     3961 tagacatgct cgtggatgac cgtgaagtac gccgtcgcaa acgaaagaaa aatgaaattc
     4021 ctgtggtgtc acttgttggt tataccaatg ctggaaaatc cacaacgatg aatgggctag
     4081 tacgtgctta tagtgaaact gctgaaaaac aagtttttga gaaagacatg ctctttgcta
     4141 cgcttgaaac aagtgtacgc gaaattgttt tgccagataa caagcaattt ttactcacag
     4201 atacagttgg ttttgttagc aaacttcccc atcaattagt gaaagcattc cgctccacac
     4261 tagaagaagc acgcgatgca gatttactca ttcatgtggt agattattcg gatccgcatt
     4321 ataaaacaat gatgaagacg acggaagaaa cgttgaaagc tgttggtgtg gaggatgttc
     4381 cagttattta tgcatacaac aaagcggatt taatagaagg agaaatttat cctaagcaaa
     4441 cggaaaatac aattgtcttt tccgcgcgtg aaaaagaaag tttggaattt ctaaccgaag
     4501 taattcgtaa agaacttttt gctagctacg agaaagcgac ttttttaatt ccgtttgagg
     4561 cggggaatgt tgtcgcttat ttaaatgatc atgcagatgt tttagctact gaatacttgg
     4621 agaatggcac gcagattgtg gctgaagtta gtccggccga tttacagaag ctagcagaat
     4681 accaagtagc tgagtaaagc gagttccagc tgaatttgct ataatgaaac atacagcaaa
     4741 tttagtgagg agatttctaa ctatgaaaaa aactggatgg ggtatacttg gggcagttgc
     4801 tgctttcaca ggatatgcat actggtcaac caaacattta actgtaacag attatgaaat
     4861 agtatcagat aaaattccag cagaatggga cggcgcaact tttgttcagt tgtctgatct
     4921 gcatagtgca agttttggtt tatataataa tcctttgctt agtatcgtga atgaactagc
     4981 gccggatgct gtttttctaa caggagatat gattgatgga gatgagtcgc catatgtagc
     5041 gatggcagtt gtgcgcaaat tggctaaaga attcccggtt ttttatgtga gcggaaatca
     5101 tgagggtcga agcgcatttt atgaagattt taaagcagac atggagaaac atcacgttac
     5161 tgtccttgaa aatgaacgct attttctaaa aaaagatggc gccgcaatca tggtagcagg
     5221 cgtccgggat cctcgttttg taagagatga ctgggcagaa aaagaactac caaaagaagt
     5281 atgggaagaa gcggcattaa aagaagcttt agacgatgcg acagctaatt tatcaccgga
     5341 ttactttacg atattactgg cgcatcgtcc ggagttttgg ccactatacc aagcctatcc
     5401 aattgattta gtattatctg gacatgcgca cggcggtcaa tttagactac ctttaacaga
     5461 aggccttttc gcaccgggac aaggtctcat gccgaaatgg acagcaggga ttcaccgggc
     5521 tggcggtaaa gcgcttattg tgagccgcgg cttaggaaat gtcacgaaac taccgcgctt
     5581 atttaatgac ccagaaatca ttcgaatgac acttagagca aaaggggatg cttaggaaaa
     5641 gtgatttatt tagataatga agatgtactc gatcaagcgt acaactttgc gatggaagaa
     5701 tatgcgcttc gttctttaga tgaaaatgaa acgtatttta tgttttaccg gatgaagccg
     5761 acgattattg ttggtaaaaa tcaaaacacg ctggaagaaa tcaaccatgc ttttgtcaaa
     5821 gaacatcata tcgacgttct ccgccgttta tctggtgggg gagctgtcta taacgacgaa
     5881 ggcaatatta gctttagcat gatcacaaaa gatgatggga atagttttca aaatttcgcg
     5941 aagttcacag aaccagttat tcgagcgctc cgcaagcttg gtgtaaatgc tgaactgagt
     6001 ggtcgaaatg atattgaagt gaatggcaaa aagataagtg gcaatgcgca atttgcaaca
     6061 aaaggtcgac tatatagcca tgggacttta cttttcgatg tcgatttatc catgctcgaa
     6121 aaagcattac aagtggatcc agagaaatac ttatccaagg gtgttaaatc tgtgcgcagt
     6181 cgtgtaacaa caattcgcga acatttagcg gaagatatcg atattctaac ctttaaacaa
     6241 attctactgg aatctatttt tgaaacgaaa gatatcccac gttatacttt tacggaagct
     6301 gacaagcaag gaatcgaaaa attacgcaca gaacgttacc ggaattggga ctggacgtat
     6361 ggtaaatcac caaaagccac tataaaacgc aaaaaaagat ttccagctgg aactattgaa
     6421 ttccaagttt cactagaaaa aggtcaagta aaagaagcga ccatttatgg ggactttttt
     6481 ggtacagagg atgtggctga attagctggg aaaataatcg gctgccgttt tgaacgtaaa
     6541 tctattcaaa atgcttggca agaaataaat gcgaaagact attttggtgg aattgaaaaa
     6601 gaagcaattt tagatatgtt atttgaataa agtttaaaac tctgagatat agattctcag
     6661 agttttttta atgcctaaag aaagcgattt caattttatg ttgacagaga ttaaatatat
     6721 atagtattat ttaaatatga taaatgataa ttaaatataa ttaattaaaa aggagtgaaa
     6781 catttggtta ttgcaaatcg agattttata caaataagta cggaaaaaat aaaaaaagaa
     6841 ataaataatc aaaaattagt tgaaatgtat aaaaggtgta tggaaaacac attagacacc
     6901 accataaaaa ttcgagatag tggactcaca tttattttaa caggtgatat tccagcaatg
     6961 tggctacgtg attcagtatg ccaagtacga ccttttctaa tttttgctaa agaaaatgaa
     7021 gaaattgagt cgatgttgat tggccttagc aaagaacaag tgagtttagt tgaaattgat
     7081 ccttatgcta acgcttttaa tgaaacacca aatggagctg gacatcaagc tgataaaaca
     7141 gaaatgcatc cacaagtatg ggaacgaaaa tatgagattg attcattatg ctatccgatt
     7201 caattagcgt actttatttg gaaaattact ggaagaacag aacaatttga ctcagcattt
     7261 ttcaagatgt tacaaacgat ttttgcttta tgggaagtag aacaacatca tgaaacaaaa
     7321 tcgccgtatc gttttgaacg gatggactgt gttccttctg atactctaaa aagaaacgga
     7381 ctaggaacag aaacagcata cacaggaatg ctttggtcag gatttagacc aagtgatgat
     7441 gcttgtgaat atgggtacct tatcccttca aatatgtttg cagtagtagt tttaggttat
     7501 gctaaagaaa ttatagaagc tttttatcca agagaaatag aaacgataaa acaagcagtt
     7561 actttacaaa atgatattca attagggatt gaaaagtttg gtacatataa tcatccgact
     7621 tttggtgaaa tatttgcttt tgaagtagat ggtcttggaa atcaattatt gatggatgat
     7681 gcaaatgttc caagtttact ctctatgcca atcatcgaat atcttgaaaa ggaatctccc
     7741 atttatcaga atacgcggaa gtttatttta agtaagtcaa atccgtatta ttttgaaggt
     7801 aaactagcaa aaggaattgg tagtccgcat acaccagcag gatatatttg gccaattgga
     7861 ctggcaattc aaggattgac agcaagtgat aaatcagaaa aactggaaat tttgcaaatg
     7921 ttgttaagaa cggatgccgg aactggatta atgcatgaat cgtttcatcc agattacccg
     7981 gaagacttta cgcgcgaatg gttttcttgg gctaatatga tgttttgtga attagtactt
     8041 gatgtagctg ggtttcgaat ggcaaatgtt ttgaagaact aacgaaggag gcttattgat
     8101 ggcaacaatt agaaataaat ctgcccaaat acaccaacaa cgaatggctt acctttttat
     8161 tgcacttcca gttttattac tagcgatttt tatgatttta ccaattggaa tggcgctatt
     8221 tgtcagtttt acagattatg atattgttaa ttctcccaat tggattggct ttgac
//
LOCUS       DASDYO010000126         8208 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.126, whole genome shotgun sequence.
ACCESSION   DASDYO010000126 DASDYO010000000
VERSION     DASDYO010000126.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8208)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8208)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8208
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.126"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..183
                     /locus_tag="U0290_002512"
     CDS             <1..183
                     /locus_tag="U0290_002512"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family deoxyribonuclease"
                     /protein_id="HEM2302546.1"
                     /translation="KSQLLFETDGPFARKEKSIVYPSNFKQIYADFEEVIPGFEKIVF
                     SNFKRLLFQKDIDKIN"
     gene            366..1151
                     /locus_tag="U0290_002513"
     CDS             366..1151
                     /locus_tag="U0290_002513"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate deacetylase"
                     /protein_id="HEM2302547.1"
                     /translation="MPKLIIDADDFGLSKAINHGIIESYKTGITTSTLLMPNLETAEH
                     AIALAKDHPDLFIGQHTNFLLGKPCTDPAEIPSLVDENGEFHRSKYYRANPELKFQYE
                     DVRTETIAQMERFKALTGHYPEHIDCHSIGDETVDQAFFDIAREFGIHTTLKYSGDKK
                     WPDQEGYLPITKLLESGALPYTNGGVSIENFLNDDFGLLKLAPNEIAEMHFDVGFLDQ
                     FVLDNSSYTLMRCRELATICDVRVRDWLLENGFELITFGDLQR"
     regulatory      1182..1287
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            1374..2048
                     /gene="tenA"
                     /locus_tag="U0290_002514"
     CDS             1374..2048
                     /gene="tenA"
                     /locus_tag="U0290_002514"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463845.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiaminase II"
                     /protein_id="HEM2302548.1"
                     /translation="MFVHGFQEEVGDLWQETLQHPFVQSLADGTLEKEAFYYYLLQDD
                     YYLSHFEKVIEKSVEQAGTAEIAAEMREVQRRLQQSELLMREQFYPRVGLTERDFSVR
                     KPAPTAYHYASHLYRMADFGSFGVTIAALLPCYALYADMGKMYEGARSSEPFYQELLD
                     SYVDENYQKVVLQQKRLVEQAASMADARELALMKQAFQISVEMEWAFFDMAYKKQNWR
                     GSVNYV"
     gene            2041..2850
                     /gene="thiM"
                     /locus_tag="U0290_002515"
     CDS             2041..2850
                     /gene="thiM"
                     /locus_tag="U0290_002515"
                     /EC_number="2.7.1.50"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463846.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hydroxyethylthiazole kinase"
                     /protein_id="HEM2302549.1"
                     /translation="MFDFMTLEKVWEKGPLVHNITNIVVANDSANGLLAIGASPIMAS
                     AKEEMDELAKMADVLVINIGTLDGELVTAMKIAGRAANVAGTPVVLDPVGVGATSYRR
                     KVVQELLAEIQFTAIRGNAGELAAIAGEAWEAKGVDAGVGSADVLSIAEKVANEWSTV
                     VIISGEVDVISDGTRFAKVANGSALLPRITGSGCLLSAVCGSFMAVQDDAFRASVEAC
                     ASYAVASEYAEIELERKLPGSFRPQFLDALASWSVEKTRAKAKIQESGEHK"
     gene            2847..3650
                     /gene="thiD"
                     /locus_tag="U0290_002516"
     CDS             2847..3650
                     /gene="thiD"
                     /locus_tag="U0290_002516"
                     /EC_number="2.7.1.49"
                     /EC_number="2.7.4.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional hydroxymethylpyrimidine
                     kinase/phosphomethylpyrimidine kinase"
                     /protein_id="HEM2302550.1"
                     /translation="MIFKQVLTIAGSDSGGGAGIQADIKTFQERKTFGMSVITAITAQ
                     NTLGVKAVHKIPVEMIREQCDAIAEDFQVSAVKTGMLADAEIIREVARNIRLHNFPNI
                     VIDPVMIAKGGTALLENEATQVLKDELLPLGTIITPNIPEAEEILGEKITTKAEIEQA
                     AKKIFDLGVKAVVIKGGHSEMSEAADFYYDGETTKWLTSERFDTPHTHGTGCTFSACI
                     AAELAKGNSLLDSVMVAKEFITSAIKYPLGIGHGHGPTNHFAYRLEDGK"
     gene            3647..4291
                     /locus_tag="U0290_002517"
     CDS             3647..4291
                     /locus_tag="U0290_002517"
                     /EC_number="2.5.1.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiamine phosphate synthase"
                     /protein_id="HEM2302551.1"
                     /translation="MRAELAVYFIAGTQDIVRGTLPGVLEEALKAGITCFQYREKGAG
                     SLQTASERKEMALECQQLCAKYQVPFIINDDVALALEIGADGIHVGQNDEEIRQVIAS
                     CAGKMKIGLSVHSVSEAEEAERLGAVDYIGVGPIFPTISKADAEPVSGTTILKEIRRA
                     GIKLPIVGIGGINETNSAEVLTAGADGVSVISAITRSDDCYSVIKQLKNPGYPS"
     gene            complement(4318..5733)
                     /locus_tag="U0290_002518"
     CDS             complement(4318..5733)
                     /locus_tag="U0290_002518"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463849.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2302552.1"
                     /translation="MHTNTGFPANFLWGGAAAANQFEGAYNVDGKGLSVQDVTPKGGF
                     GHITDGPTPDNLKLEGIDFYHRYKDDVKLFAEMGFKVFRTSIAWSRIFPNGDETEPNE
                     AGLQFYDDLFDELLAHNIEPLITLSHYETPLHLSKTYDGWVNRKMIDFYENYVRTVFN
                     RYKGKVKYWLTFNEINSILHAPFMSGGISTSPDKLSQKDLYQAVHHELVASALATKIG
                     HEIMPEAQIGCMVLAMPTYPLTSNPDDIIAVMEAERKNYFFSDVHVRGTYPGYMKRYF
                     RENNIELDVTEEDLEILKNTVDFISFSYYMSTTETADESKRKAGAGNILGGVQNPYLE
                     ASEWGWQIDPQGLRVVLNEFWDRYQKPLFIVENGLGAIDQLEKDENGNYTVNDDYRIN
                     YLSAHLSQVKEAIKDGVDLMGYTSWGCIDLVSASTAEMKKRYGFIYVDRNNDGTGTLN
                     RYKKKSFGWYKNVIATNGEDL"
     gene            complement(5947..7203)
                     /gene="vip"
                     /locus_tag="U0290_002519"
     CDS             complement(5947..7203)
                     /gene="vip"
                     /locus_tag="U0290_002519"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463850.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell invasion LPXTG protein Vip"
                     /protein_id="HEM2302553.1"
                     /translation="MNKYFKNLATVLFTVSLLTTSITALPAMASAYEETHNASTIYIS
                     PLDAPHVGDTKITGKTTALSSFAIAIYTPEGRLTGTFFGTTNAAGTYAVDLSDFTYYD
                     PLGYEASGNVILEKGAMVRSMTETNSDLIKTVTINYNYIQTAINELFLNNDPTGTILA
                     ATDQNAINAVQEQINTVTSSEKETFQEQLNNAQQQLDARIAQEQAAIQAVNQLFLEDN
                     PANSIKAETTQDLIDQAQTLVDVLPASELKDTLQANIVKAQTELDERSKPVTPPKNDP
                     ETDNPEEPVTPVDPATPTPDEPSTPTDPATPTPDEPSTPTDPATPEKPEITTPENPES
                     TVVESDSSENEPEKSADSKIVNNPIQITSQATKTATKQATKQAKSSVTKTTTLPIPKT
                     GDTETTSSILFGTLMLASLALFRRKK"
     gene            7532..8191
                     /locus_tag="U0290_002520"
     CDS             7532..8191
                     /locus_tag="U0290_002520"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GAP family protein"
                     /protein_id="HEM2302554.1"
                     /translation="MGSAFSAILSPAVGILISPFPIVGLILILLSNKARINSIFYTVG
                     WIVGNIAIFFIGLFLMSSAVSSSGDQSTLVKVVLIVLGALLILLGAHDFTKRPKNGEQ
                     AATPKWFEKMSNIKPGGAMMFAFVLSAVNPKNMLLSLTAGVSVGALNLSGGQETTATI
                     IFGIIACCSIYIPTIAFLLAGSKLNNALDSTRKWLIQNNSVIMAVLFLFIGLSVISKA
                     F"
BASE COUNT         2247 a         1430 c         2034 g         2497 t
ORIGIN      
        1 aagtcccaat tattatttga aacggatggt ccttttgcga gaaaagagaa aagtattgtt
       61 tatccaagca attttaaaca gatttatgcg gattttgagg aagttattcc aggatttgaa
      121 aagatagttt tctctaattt taaaagacta ttatttcaaa aagatattga taaaattaat
      181 taagggaatt agagtaaatt aaggtatttc ttaatagtat attgaaagat tggaactatg
      241 gattaattgt taaagagatt tggaaagatt agcttatagt tatgctagtt gataagaggc
      301 aatcttttgt taagaaatta ataaatttgt agtctgtttt tttaattata ataaggaggt
      361 tccccatgcc aaaactaatc atcgacgcag acgatttcgg tctatccaaa gccatcaacc
      421 acggcatcat cgaaagctac aaaaccggca tcacaacatc cactttactc atgccaaacc
      481 tagaaactgc cgagcacgca atcgctctcg caaaagacca cccagaccta ttcatcgggc
      541 aacacacaaa tttcttactc ggaaaaccat gcacggaccc ggcggaaatc ccgtcacttg
      601 tcgacgaaaa cggggaattc catcgttcca aatattaccg ggctaaccct gaactgaaat
      661 tccaatacga agatgtgcgc acggaaacca tcgctcaaat ggaacgattc aaagcgctaa
      721 ctggtcacta cccagaacac attgactgcc actcaatcgg tgatgaaacg gttgaccaag
      781 ctttctttga tattgcgcgt gagttcggga ttcacaccac tttaaaatac agcggtgata
      841 aaaaatggcc agatcaggaa ggttatttac caattactaa actattggaa tcgggcgcac
      901 tcccatacac aaacggcggt gtctcgattg agaacttcct taacgatgat ttcggattat
      961 taaaattggc gccaaacgaa atcgctgaga tgcattttga tgtcggtttt ttggatcaat
     1021 ttgtgctgga taattcttct tatacgttga tgcggtgccg cgagcttgcg acgatttgtg
     1081 atgtgcgggt gcgggattgg cttcttgaaa atgggtttga gcttattaca tttggggatt
     1141 tacagcggta aaactctatg ttatgatgaa cgcaacttaa taagaaaaac taggggggcc
     1201 gattctggct gagataggaa ggtaatgctt tctgaccctt tgaacctgtt tgttagtgca
     1261 agcgtaggga agtgaatgtg aaagtgaccg gaaaatttat cgcggctgct gtttctttgc
     1321 ttatgctaag ggacagtggg cgcttttttt attgttcaaa aggaggagtt tgagtgtttg
     1381 ttcacggttt tcaagaagaa gtaggggatt tatggcaaga aacgttgcag catccatttg
     1441 tgcagagttt ggcggatggg acgcttgaga aggaggcgtt ttactattat ttgctccagg
     1501 atgattatta cttgtcgcat tttgagaagg tgattgagaa aagtgtagag caagctggaa
     1561 ctgcggaaat tgctgcggaa atgagggaag tacaaaggcg gcttcagcaa tcagagttgt
     1621 tgatgcgcga acagttttat ccgcgggttg ggctaacgga gcgcgatttt tccgtgcgaa
     1681 aaccggcacc aactgcttat cattatgctt ctcaccttta ccggatggca gattttggca
     1741 gttttggggt aacgattgcg gcgcttttgc cgtgttatgc gctttatgct gatatgggga
     1801 aaatgtacga aggggcgcgg agttcggagc cattttatca agagttgttg gatagttatg
     1861 tggatgaaaa ttatcaaaaa gtggtgttgc agcagaagcg gttggtggaa caggcggcga
     1921 gtatggcgga tgcgcgggag cttgccctca tgaagcaggc ttttcaaatt agtgtggaaa
     1981 tggaatgggc attttttgat atggcttata aaaaacaaaa ttggcgtggg agtgtgaatt
     2041 atgtttgatt ttatgacgtt ggaaaaggtg tgggaaaaag ggccgttggt acataatatt
     2101 acgaatatcg tggttgcgaa tgactcggcg aacgggttgc ttgcgattgg tgcgtcaccg
     2161 attatggctt ctgcgaaaga ggaaatggat gaacttgcga aaatggcgga tgtgctcgtg
     2221 attaatattg ggacgctaga cggggagctt gttacagcga tgaaaattgc tggacgtgcg
     2281 gcaaatgttg ctggaacgcc ggttgtgctt gacccggtcg gtgttggtgc gacttcatac
     2341 cgtcgtaaag tggtgcaaga attattggct gaaatccagt ttacggcgat tcgtggaaat
     2401 gcgggagagc ttgcggcgat tgctggtgaa gcttgggaag cgaaaggcgt ggatgcgggt
     2461 gttggttcgg cggatgtgct gagcattgct gaaaaagtgg cgaatgaatg gagcacggtt
     2521 gttattatta gcggcgaagt agatgtgatt tcagacggaa cgcgttttgc aaaagtggct
     2581 aatggtagcg cactgcttcc aagaattact ggttctggtt gtttgctcag tgcagtttgc
     2641 ggtagtttta tggccgttca ggatgatgct tttcgagcta gtgtcgaagc atgcgcgagt
     2701 tatgcggtgg cttctgagta cgcggaaatc gaattagaaa gaaaacttcc aggttcattt
     2761 cgaccacaat ttttagatgc tcttgctagt tggtcggtcg aaaaaacgcg tgccaaagct
     2821 aaaatccaag aaagtggtga acacaaatga ttttcaaaca agtattaacg atagctggtt
     2881 cagattctgg cggcggcgcg gggatacaag cggatatcaa gacatttcaa gagcgtaaaa
     2941 cctttggcat gtccgtcatc acggcaatca cggcacaaaa cacgctaggt gtaaaagcag
     3001 tgcataaaat cccggtagaa atgatccgcg aacagtgcga cgcgattgca gaggattttc
     3061 aagtgagcgc cgtgaaaact ggaatgctag cagatgcaga aattatccgg gaagtggcgc
     3121 ggaatatccg tttgcacaac ttcccaaata tcgtcattga tcctgtgatg attgcaaaag
     3181 gtggaactgc tttgcttgaa aacgaggcga cccaagtgtt gaaagacgag cttttgccac
     3241 ttggtacgat cattacgccg aatattccag aagcggaaga aattcttggt gaaaaaatca
     3301 caaccaaggc ggaaattgaa caagccgcta agaaaatttt tgatttaggt gtaaaagcgg
     3361 ttgttattaa aggtgggcat agcgaaatga gtgaggcggc tgatttttac tatgatggcg
     3421 aaacgacaaa atggctgacg agcgagcgct ttgatacgcc gcatacgcac gggactggtt
     3481 gcactttttc ggcatgtatt gcagctgaac ttgcgaaagg gaattcgctt ttggatagtg
     3541 tcatggttgc gaaagaattt atcacaagtg cgattaaata tccgcttgga attggtcacg
     3601 gtcatggtcc aaccaaccat tttgcctacc gattggagga tgggaaatga gagctgaact
     3661 agctgtatat tttatcgctg gaacgcaaga tattgttcgt ggaacgttgc caggtgtgtt
     3721 agaagaagca ctgaaagccg gaattacttg tttccaatat cgcgaaaaag gagcaggctc
     3781 actccaaact gcttccgaaa gaaaagaaat ggcgctagaa tgccaacaat tatgcgcaaa
     3841 atatcaagtg ccattcatta ttaacgatga tgtcgcccta gccctcgaaa tcggcgcgga
     3901 cggcatccat gtcgggcaaa acgacgagga aattcgccaa gttatcgcga gttgcgctgg
     3961 aaaaatgaaa atcggacttt cggttcattc ggttagtgaa gcggaggaag cagaacgact
     4021 tggagcggtg gattatatcg gcgttgggcc catttttccc acgatttcaa aagcggatgc
     4081 agagccagtg agtggaacga caattttgaa agaaattcgc cgggctggaa ttaagctacc
     4141 aattgtcggg attggcggaa ttaatgaaac aaattcagct gaggttctca cagcaggtgc
     4201 ggacggggta tcggttattt cagcgataac tcggtcggat gattgctact ccgttatcaa
     4261 gcaattaaaa aacccaggtt acccttctta aaaagggcaa acctgggttt ctcattttta
     4321 taaatcttca ccattggtag caataacgtt cttgtaccaa ccaaaacttt tcttcttata
     4381 acggtttagc gtacctgtgc cgtcgttgtt gcgatcgaca tagataaagc cgtaacgttt
     4441 tttcatttca gcagtggagg cacttacaag gtcaatacag ccccatgaag tgtaacccat
     4501 caagtcaacg ccatctttaa tcgcttcttt cacttgcgat aaatgagcgc tcaaataatt
     4561 aatacggtag tcatcattta ctgtgtagtt gccgttttcg tctttttcta gttgatcgat
     4621 agcgccaaga ccgttttcta cgatgaaaag tggtttttgg tatctatccc agaattcgtt
     4681 taggacaacg cgcaagcctt gagggtcgat ttgccagccc cattcggatg cttctaggta
     4741 agggttttgt acgccgccta ggatgtttcc tgcgccagct ttgcgttttg actcgtcagc
     4801 tgtttcggtt gtgctcatgt aatagctgaa ggaaatgaaa tctactgtgt ttttaaggat
     4861 ttctaggtct tcttctgtta cgtctaattc aatattattt tctctgaaat agcgtttcat
     4921 gtagcccgga taagttccgc ggacatgaac atcggagaag aagtagtttt tgcgctctgc
     4981 ttccataaca gcgataatat catctgggtt ggaagttagc ggataagttg gcattgctag
     5041 gaccatgcag ccgatttggg cttcgggcat gatttcgtga ccaatttttg tagccagcgc
     5101 gctcgccaca agttcgtggt ggacagcttg atataagtct ttttgagata atttatctgg
     5161 gcttgtagaa ataccgccgc tcatgaatgg tgcgtgtaaa atggagttga tttcattgaa
     5221 agtgagccaa tattttactt tgcctttata gcgattaaat acggtgcgga catagttttc
     5281 atagaagtcg atcatttttc tatttaccca gccgtcgtaa gttttcgata aatgaagtgg
     5341 tgtttcatag tgagataaag taatcagtgg ttcgatatta tgtgctagaa gttcatcgaa
     5401 taaatcatcg taaaattgta atcctgcttc gtttggctca gtttcgtcac catttgggaa
     5461 gatacgggac caagcgatgg aagtacggaa aaccttgaag cccatttcgg caaaaagttt
     5521 cacgtcatct ttgtagcgat gatagaagtc aattccttct aattttaagt tatctggtgt
     5581 tggaccgtca gtaatgtgac caaatccgcc ttttggagta acatcttgaa cggaaagtcc
     5641 ttttccatcg acgttgtaag cgccttcgaa ttggtttgca gcagcagctc caccccataa
     5701 aaagttggct ggaaatcctg tatttgtatg catgttaaaa actccttttc tacattttaa
     5761 agtatctatg aaaaaaacca aatacttttc taaatacatg caaaaaaaca cggtacttag
     5821 aaaaatattt ggttatgccc ggctttcgtc ggtaacattc cgatttatag ttaaaatata
     5881 gcaaaaataa ggaagatagt caacgaaaac aaataacacc gactctattt tgagccggtg
     5941 ttttgactat tttttacgtc taaaaagggc aagggaagcg agcataagtg taccgaataa
     6001 aatgctagat gtggtttcag tgtcccctgt tttaggaatt ggcaaagtag ttgtttttgt
     6061 tacgctggat tttgcttgtt ttgttgcttg ttttgttgct gtttttgttg cttgactagt
     6121 aatttgaatc gggttgttta ctatttttga atcggcggat ttttctggtt cattttcgct
     6181 agaatcagat tctactaccg ttgattctgg attttctgga gtggtgattt ctggtttttc
     6241 aggtgttgct ggatctgttg gtgtagatgg ttcgtcaggt gttggggttg ctggatctgt
     6301 tggtgtagat ggttcgtcag gtgttggagt tgctggatct actggtgtga ctggctcttc
     6361 tgggttatca gtttctggat cgttttttgg tggtgttaca ggtttggaac gttcgtctag
     6421 ttctgtttga gcttttacaa tgttggcctg aagcgtatct tttaactcgg aagcaggaag
     6481 aacatcgaca agcgtttgag cttggtcaat caagtcttgc gtagtttcag ctttaatcga
     6541 gtttgctgga ttatcctcta ggaaaagttg gttgacagct tgtatggctg cctgttcttg
     6601 tgctatgcgc gcatccagtt gttgttgagc attattaagt tgttcttgga aagtttcttt
     6661 ttctgaacta gttacagtat taatttgttc ctgcacagcg ttaatagcgt tttgatctgt
     6721 tgcagctaaa atagttcctg ttggatcatt atttagaaac agctcattaa tggctgtttg
     6781 gatatagttg tagttgatgg ttactgtttt gattaaatcg ctattagttt ctgtcattga
     6841 acgaaccatg gcccctttct ctaaaattac attgccacta gcttcgtagc caagaggatc
     6901 ataataagtg aaatcggata aatcaacagc gtaggtacca gctgcattgg tagtgccaaa
     6961 gaatgttcca gtgagcctgc cttctggggt ataaattgct atggcaaaag atgataatgc
     7021 tgtggttttt ccagtgattt tcgtgtcacc aacatggggc gcatctaaag ggctaatata
     7081 aatagttgag gcattatgtg tttcttcata tgcggatgcc atcgcaggta aggcagtaat
     7141 agaagtagtt aaaagggaga cagtaaataa tacagttgct aagttcttaa aatatttatt
     7201 cattaagtgg tctttcctcc aatagaaata atcttgtgag cttagcatac tattatcagg
     7261 atgctaaaaa tagtagtgaa atgagttgta tttccggttt atgaagtgaa attatgtcta
     7321 attcgccaca tttggctaat aactacattg tatcccttag aataaagtct ttttttagtc
     7381 aagcgctccg ataaaagcat ttttgttctt ctgagaaaaa gatataccga caattgtttg
     7441 ttagccggga ttagagggaa ctaggtaaaa ggaacggtct aatgaagatg attttttcat
     7501 tagtaaagat atatacagag gaggagtcag cgtgggatca gcgttttcag ctattttgtc
     7561 accggcagtg gggattttga ttagcccatt tccaattgta ggacttattt tgattttact
     7621 tagcaacaag gctcggatta acagtatttt ttatacggta ggttggattg ttgggaatat
     7681 agctattttc tttattgggt tattcttaat gagttcagcg gttagttcgt ccggagatca
     7741 gtcaaccttg gtcaaagtgg tacttattgt gctgggggct ttacttatac ttctaggcgc
     7801 acatgacttt acaaaacgtc ctaaaaacgg ggagcaggct gcaacaccaa aatggtttga
     7861 aaaaatgagc aatattaaac cgggaggcgc gatgatgttt gcgtttgtgc tttcagcagt
     7921 gaatccaaaa aatatgttgc tttcacttac agcgggagtg agcgttgggg cgctgaattt
     7981 atctggtggg caagaaacaa cggcaacgat tatttttggc attatcgctt gttgttcgat
     8041 ttatattcct accattgctt ttttattagc tgggagtaaa cttaacaacg cattggatag
     8101 cacgcgtaaa tggcttatcc aaaacaattc agtgattatg gcggttcttt tcttatttat
     8161 tggtttgagt gttattagta aggcgtttta aaaataaagc tgtttttt
//
LOCUS       DASDYO010000127         8168 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.127, whole genome shotgun sequence.
ACCESSION   DASDYO010000127 DASDYO010000000
VERSION     DASDYO010000127.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8168)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8168)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8168
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.127"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            116..493
                     /gene="dhaM"
                     /locus_tag="U0290_002521"
     CDS             116..493
                     /gene="dhaM"
                     /locus_tag="U0290_002521"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463881.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS-dependent dihydroxyacetone kinase
                     phosphotransferase subunit DhaM"
                     /protein_id="HEM2302555.1"
                     /translation="MISIVLVSHSQKITEGLQEMIVEMVGDTVHIISSGGTGDGRLGT
                     NAIMIADNIATCTNSEHIYIFCDIGSAILSAETALELLETDLLEKTTIIDAPLVEGAF
                     TAAVQSLVNPSKEAILQELTNVH"
     gene            578..1009
                     /locus_tag="U0290_002522"
     CDS             578..1009
                     /locus_tag="U0290_002522"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302556.1"
                     /translation="MKFFRGMIGFCIAGMIVMSVWTPLAENYGIFGGYLAAFIIIGPM
                     WFMNHYVGLIENDEDAAFVDMAVGIGICGIMRDVFMQGGGELVSSLPTIGLVAIGAVL
                     AGIVAAAIEKDMAKKQEAKQEKTEPGMNMKEEERLNENQLV"
     gene            1025..1366
                     /locus_tag="U0290_002523"
     CDS             1025..1366
                     /locus_tag="U0290_002523"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463879.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302557.1"
                     /translation="MSIGIALATIAGGFLFPFAIRMMWGKMVDEWGAIGGWMAAAFIV
                     GTVWTINHGIPKSMIYQSGTVWVDMAVAAGIGVFTASLLTGGKFSKSIVNLAAAVVGG
                     VLGGFLLSLFL"
     gene            1388..2383
                     /locus_tag="U0290_002524"
     CDS             1388..2383
                     /locus_tag="U0290_002524"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463878.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit DhaK"
                     /protein_id="HEM2302558.1"
                     /translation="MRRLVNDGYEAVEEMLAGYVAAQGKYVDFAENDKRVIVSKQMSE
                     EPRVRIIVGGGSGHEPLFLGYVGKDFADAAVVGNINTSPSPEPCYNAVKAVDSGKGCL
                     YMYGNYAGDVMNFDMGAEMAADDGIRVETVLVTDDIYSAENVEDRRGVAGDLIVFKAA
                     ASAAAKGLDLDAVKQAAEKANANTFSMGVALSSSTLPVTGKAIFEMKEGEMEVGMGIH
                     GEPGIKRTSIEPADKVVDQIMGYLIEEMKLTADEEVHVLINGLGGLPVMDQYICYRRV
                     DEILKEKGVHIHNPLVGNYATSMDMIGMSITLVRLDDELKDLLDTPCDTPYFKVD"
     gene            2405..3055
                     /gene="dhaL"
                     /locus_tag="U0290_002525"
     CDS             2405..3055
                     /gene="dhaL"
                     /locus_tag="U0290_002525"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463877.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroxyacetone kinase subunit L"
                     /protein_id="HEM2302559.1"
                     /translation="MSELVMDSAFFGHVLQDMGALIEKERDYLTGLDSDIGDGDHGIN
                     LSIGFREVNKQLDELLTASPDIATLLKKSGMILLGKVGGASGPLYGSFFMKCGADVPG
                     KTEVNFDELCGMIINGAAAVQHRGKAELGDKTMMDAFLPGVEVLQNRDTNAAPIETFS
                     AFVDAMHAGAQSTIPLIAKKGRALRLGERAIGHLDPGSESSWMLMNVILENLKKAV"
     gene            3059..3823
                     /locus_tag="U0290_002526"
     CDS             3059..3823
                     /locus_tag="U0290_002526"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463876.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="triose-phosphate isomerase"
                     /protein_id="HEM2302560.1"
                     /translation="MRKPLVGINMKNYINTRAQTSEWLEATIPLLKNFSDVDTFIFPS
                     MGTLETTANLLAGTSFGFGPQNMAPEKSGPLTGEFSVESIIDLNANYVEIGHAERKNL
                     FHEKTSEIAKKIKLALDEKITPVVCVGEEVRANDTNELKNALKKQIEALFQTINLAQW
                     ENVVLAYEPEWAIGKASSAETNYIESAHQALREIIRELGGDETLVRIIYGGSVSKENA
                     AEIVRQKNVDGLFVGRFGHKPQNFADIVSIVSKTKG"
     gene            3830..4276
                     /gene="rpiB"
                     /locus_tag="U0290_002527"
     CDS             3830..4276
                     /gene="rpiB"
                     /locus_tag="U0290_002527"
                     /EC_number="5.3.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463875.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose 5-phosphate isomerase B"
                     /protein_id="HEM2302561.1"
                     /translation="MKIAIGCDEMGYELKQTLITRLKEKNIEFTDFGSFENEKVLYPS
                     IAEKVALEVKNNDYDRGILICGTGIGMAITANKIHGIRAAQIHDSYSAERARKSNDAH
                     IMTMGALVIGPSLAVSLLDTWLDSDFSGGRSQAKVDLMEEIDQKNR"
     gene            4301..5065
                     /locus_tag="U0290_002528"
     CDS             4301..5065
                     /locus_tag="U0290_002528"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463874.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="D-threitol dehydrogenase"
                     /protein_id="HEM2302562.1"
                     /translation="MTFKGFDKDFNITDKVAVVTGAASGIGKAMAELFSEKGAYVVLL
                     DIKEDVKDVAAKINPSRTLALQVDITKKENIEKVVAEIKKVYPKIDILANSAGVALLE
                     KAEDLPEEYWDKTMELNLKGSFLMAQIIGREMIATGGGKIVNMASQASVIALDKHVAY
                     CASKAAIVSMTQVLAMEWAPYNINVNAISPTVILTELGKKAWAGQVGEDMKKLIPAGR
                     FGYPEEVAACALFLVSDAASLITGENLIIDGGYTIK"
     gene            5112..5768
                     /gene="fsa"
                     /locus_tag="U0290_002529"
     CDS             5112..5768
                     /gene="fsa"
                     /locus_tag="U0290_002529"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463873.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fructose-6-phosphate aldolase"
                     /protein_id="HEM2302563.1"
                     /translation="MKFFLDTASVSEIKRISELGLVDGVTTNPTIIAKEGRPFEEVIK
                     EICSIVDGPVSAEVIGLEADKMVEEARILAKWAPNVVVKIPMTEEGLKAVHTLTAEGI
                     KTNVTLIFTVSQGLMAAKAGATYISPFLGRLDDIGTDGMILIKNLKKVLDNYGLKAEI
                     ISASIRHIGHLEEAAEAGAHIATIPGSLFPKLWSHPLTDKGIEGFLKDWEAFSQKEGN
                     "
     gene            5770..7767
                     /gene="tkt"
                     /locus_tag="U0290_002530"
     CDS             5770..7767
                     /gene="tkt"
                     /locus_tag="U0290_002530"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463872.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM2302564.1"
                     /translation="MSRIDEQMVNSIRVLSMDMIEKANSGHPGLPMGAAPMAFSLWKN
                     HLKFNPEHPTWFNRDRFVLSAGHGSAMLYSLLHLFGYDLPMSELKNFRQTGSKTPGHP
                     EFGHTVGVDATTGPLGQGFAMGVGMAMAEAHLGAKFNQPEFPVVDHNTYVLCGDGCLM
                     EGISYEAASLAGHLKLGKLVVLYDSNDISLDGDLNESFSEDIELRFRAAGWQTLRVDD
                     GNDLDALDAAIHLAKTEKSRPTLIEVKTVIGYGSPGKAGKSAAHGSPLGEKELKLAKE
                     AYDWQMPPFELPKTVENQKEFYHSKGRASESSWLRTFNAYKQKYPALAESLQQLMDDN
                     LDADWDAELPVFDENADKAVATREVSGIVLQELEKKLPNLFGGAADLASSNKTHLKAS
                     ERFAPGNYAAKNISFGVREFAMGAAVNGMTLHGGVQAFGATFFVFSDYLRSAIRSAAL
                     MGIPSTFIMTHDSIAVGEDGPTHEPIEHLASFRAMPGLHVIRPADGNETVEAYRYAFT
                     QKEQPTMLVLSRQNLPILPNSAAKAQTGLAKGAYILADSPLDKLDIILLASGSEVHLM
                     TAVRDNLAKKGFGARVVSMPSFDLFDKQSPEYKESVLPKAVKNRFAAEMGASYGWHKY
                     LGDTGQILAIDSFGMSGPGDELARRFGFTVENLTELALKQL"
     gene            complement(7887..8075)
                     /locus_tag="U0290_002531"
     CDS             complement(7887..8075)
                     /locus_tag="U0290_002531"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014931136.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302565.1"
                     /translation="MEERFEKIYTQGKLNIMEIWVDKETGVQYVYHLSGYAGGMSPLL
                     DADGKPLLADLSKLNGAE"
BASE COUNT         2547 a         1579 c         1844 g         2198 t
ORIGIN      
        1 aaacacaaat atattttata aaacacaaca aaagatagca ctttacaata aaaaacaagt
       61 atgttaggat ataaatagca attaaacaca attaaaaaca gaaaggagca accaaatgat
      121 aagtattgtt ttagtatctc acagtcaaaa aatcacagaa ggcctccaag aaatgattgt
      181 tgaaatggtt ggagatacag tacatattat ttcttctggc ggaactggcg acgggcgtct
      241 tggcacaaat gcaatcatga tagctgataa catcgcgact tgcactaatt ctgaacatat
      301 ttatattttt tgcgatattg gaagcgctat cttaagtgcc gaaacagcac tcgaattatt
      361 agaaactgac ctccttgaaa aaacaaccat catcgatgcc ccacttgttg aaggcgcatt
      421 tactgccgct gttcaatctc tcgttaatcc atccaaagaa gctatcctac aagaactcac
      481 aaacgtgcat taaaaacgta ataaaacgca attttgtaac tgggaactat gtaaattaat
      541 ttttacatga caatactatt ttcgaaagga gtttattatg aaattcttta gaggaatgat
      601 tggtttttgt atcgcaggta tgattgttat gagtgtttgg actccacttg ccgagaatta
      661 tggtattttt ggaggttatc tggcagcttt cattattatt ggtccaatgt ggtttatgaa
      721 tcactatgtt ggtttaatcg aaaatgatga agacgcagcg tttgttgata tggctgtcgg
      781 aattgggatt tgcggaatta tgcgtgatgt ctttatgcaa ggtggtggcg agttagtaag
      841 ttcgcttcca acgattggtc ttgttgcgat tggagcagtt ctagctggaa tcgtggccgc
      901 agcaattgaa aaagatatgg caaaaaaaca agaagcaaaa caagaaaaaa cagaacctgg
      961 catgaatatg aaagaagaag agcgtttaaa cgaaaatcaa ttagtctaaa aaggagtgta
     1021 aataatgagc attggtattg cattagcaac gattgcaggt ggctttttat tcccttttgc
     1081 tattcgaatg atgtggggaa aaatggttga tgaatggggc gctatcggag gttggatggc
     1141 agcagcattt atcgttggta cagtttggac aattaatcat ggtattccaa aatcaatgat
     1201 ctatcaatct ggaacagttt gggtagatat ggcggttgca gctggtattg gtgtattcac
     1261 agcttccctt ttaacaggcg gtaaattttc taaatcgata gtcaatttgg cagcagctgt
     1321 agttggcggc gtgcttggcg gatttttact atcactattc ttataaaaat atgaaggagg
     1381 aagaaaaatg agacgtttag tgaatgatgg gtatgaagca gtagaagaaa tgttagctgg
     1441 ttatgttgcg gcacaaggga aatacgtaga ttttgcagaa aatgataagc gagtaatcgt
     1501 aagcaaacaa atgagcgaag aaccccgtgt gcggattatt gttggtggcg gttctggtca
     1561 tgaaccactt ttccttggtt atgttgggaa agatttcgcg gatgcggcgg tagttgggaa
     1621 cattaatact tccccttctc cagaaccttg ttataacgca gtaaaagccg ttgatagcgg
     1681 taaaggttgt ctatatatgt acggaaatta tgctggcgat gtgatgaact ttgatatggg
     1741 cgctgaaatg gctgcggacg acggtattcg cgttgaaaca gtgcttgtaa cagatgatat
     1801 ttactctgct gaaaatgtag aagatcgtcg tggtgtggct ggtgacttaa ttgtatttaa
     1861 agcagcggca tctgcagcag caaaaggact tgacctagat gcggtgaaac aagctgctga
     1921 aaaagctaat gcaaatacgt tctcgatggg tgttgcgctt tcttcttcta cccttcctgt
     1981 aactggtaaa gctattttcg aaatgaaaga aggcgaaatg gaagttggta tgggaatcca
     2041 cggtgaacca ggaatcaaac gtacttccat cgaaccagct gataaagtgg ttgatcaaat
     2101 tatgggctat cttatagaag aaatgaaatt aactgcggat gaagaagtgc atgtacttat
     2161 taatggactt ggcggtttac cagtgatgga tcaatatatt tgttatcgcc gcgtcgatga
     2221 aattttgaaa gaaaaaggcg tgcatattca taacccactt gttgggaact acgcgacttc
     2281 gatggatatg attggtatgt cgattacact ggttcgttta gacgatgaac tgaaagatct
     2341 tttagataca ccgtgcgaca caccatattt caaagtggac taaattacta ctggaggaat
     2401 aaaaatgagc gaattagtta tggatagcgc ttttttcggc cacgttttac aggacatggg
     2461 agcgctaatt gaaaaagaac gtgattactt aaccggactg gactcggata ttggagacgg
     2521 cgaccacgga atcaatctta gtattggctt tcgtgaagtg aataaacaat tagacgaatt
     2581 actcactgct tctcccgata ttgcaacgtt gcttaaaaaa tccggaatga ttctccttgg
     2641 aaaagttggt ggcgcatctg gcccgcttta tggcagtttc tttatgaaat gtggcgctga
     2701 tgttcctggg aaaacggagg ttaacttcga cgagctttgc ggcatgatta taaatggggc
     2761 cgctgcggtt caacatcgcg gaaaagccga acttggtgat aaaacgatga tggacgcctt
     2821 cttgcctggc gtggaagtgc ttcaaaatcg agatacaaat gcagctccaa tcgaaacttt
     2881 ttccgcattt gtagatgcta tgcatgctgg cgctcagtcc acgatcccac ttattgctaa
     2941 gaaaggtcgc gcactaagac ttggcgaacg agcaattggt caccttgatc ctggctctga
     3001 atcgtcttgg atgttaatga atgtcatttt agaaaattta aaaaaggcgg tctgatttat
     3061 gcgtaaaccc ttagttggaa ttaatatgaa aaactatatt aacactcggg ctcagacatc
     3121 tgaatggtta gaagcgacta tccctcttct taaaaatttt tctgatgtgg atacgtttat
     3181 ctttccttct atgggcacac tcgaaacgac cgccaacctt ttagcgggga catcatttgg
     3241 ctttggtcca caaaatatgg cgccggagaa atccggcccg ctaactggtg aattttcggt
     3301 ggaatctatc attgatctaa acgcgaacta tgtcgaaatt ggtcacgcag aacgcaaaaa
     3361 cctttttcat gagaaaacta gtgagatagc gaagaagatt aaacttgcat tggacgaaaa
     3421 aatcactccg gttgtctgtg tgggtgaaga agtccgtgcg aatgatacaa atgaattaaa
     3481 aaatgcgcta aaaaaacaaa tcgaagcgct gtttcagaca attaatttag cacagtggga
     3541 aaatgttgtt ctggcttatg aaccggagtg ggcaattgga aaggcgtctt cagctgagac
     3601 aaactacatc gaaagcgcgc atcaagcgct gcgtgaaatt attcgcgaac taggcggcga
     3661 tgaaacgctc gtaagaatta tttacggtgg ctcggtcagc aaagaaaacg ccgcagaaat
     3721 tgtccgtcaa aaaaatgtcg atggtttatt cgtcggaaga tttggccata aaccgcaaaa
     3781 ttttgccgac attgtttcta ttgttagcaa aacgaaagga tgagttagta tgaaaatcgc
     3841 aattggttgt gacgaaatgg gttacgaact aaaacaaacc ctcatcacac gtttaaagga
     3901 gaaaaatatt gagtttactg atttcggcag ttttgaaaac gaaaaagtac tttatccaag
     3961 tattgccgaa aaagtagcac tagaagttaa aaacaacgat tatgaccgag ggatccttat
     4021 ttgcggtaca ggtattggaa tggccattac agcaaacaaa attcacggca ttcgcgcagc
     4081 acaaattcat gattcttatt cagcagaacg cgcaagaaaa agtaacgacg cacatattat
     4141 gaccatggga gctctagtaa tcgggccatc ccttgccgta tctctacttg atacatggct
     4201 ggatagcgac ttttcgggcg gacgctccca agcaaaagta gatttaatgg aagaaatcga
     4261 ccaaaaaaat agataaaaaa tttattggag gtaatgaaaa atgactttta aaggttttga
     4321 taaagatttt aacattacag acaaagtagc cgtggtaact ggggcagcaa gcgggattgg
     4381 taaagcaatg gcagaacttt tttccgaaaa aggcgcttat gttgtcttgc ttgatattaa
     4441 agaagatgta aaagatgtcg cagcaaaaat caatccatca agaacgctag cacttcaagt
     4501 cgatattacg aagaaagaaa acatcgaaaa agtcgttgcc gaaatcaaaa aagtctatcc
     4561 aaaaatcgat attttagcca attcagctgg tgtcgcactt ctcgaaaaag cagaagattt
     4621 accagaagag tactgggata aaacaatgga actgaactta aaaggttcgt tcctaatggc
     4681 gcaaattatc ggtcgcgaaa tgattgcaac tggcggcggt aaaatcgtta atatggcctc
     4741 tcaagcttct gttattgcac ttgataaaca cgttgcctac tgcgctagta aagcagcgat
     4801 tgtttctatg acgcaagtgc tagcaatgga atgggcgcct tacaacatta atgtcaatgc
     4861 gatttcccca accgttatct tgacggaact tggcaaaaaa gcttgggcag gtcaagtcgg
     4921 cgaagacatg aaaaaattaa ttccagccgg tagatttggt tatccagaag aagttgccgc
     4981 atgcgccctc tttttagtaa gtgacgcagc gagccttatt actggggaaa acctaattat
     5041 cgacggtggt tatacgatta aataaagtat tcagctttaa agttcagctg agagaatgga
     5101 gcgagtaaat aatgaaattt ttcttggaca cagcaagcgt atcggaaata aaacgaatta
     5161 gcgaacttgg tttagtggac ggtgtgacaa ccaatccaac catcatcgca aaagaagggc
     5221 gaccatttga agaagtaatc aaggaaattt gttctatcgt agacggtcca gttagcgcag
     5281 aagttatcgg cctcgaagca gacaaaatgg tagaagaagc tcgaattcta gcaaaatggg
     5341 cgccaaatgt agtagtaaaa attcctatga cggaagaagg tttaaaagca gtccataccc
     5401 tcacagctga aggcattaaa acaaatgtta cgcttatttt cactgtttcc caaggattaa
     5461 tggctgcaaa agctggcgcg acttatatta gcccgttctt aggaaggcta gatgatattg
     5521 gtacagacgg aatgatttta attaaaaact tgaaaaaagt gcttgataat tatggtctaa
     5581 aagcagaaat catttcagca agtatccgcc atatcgggca tttagaagaa gccgctgaag
     5641 ccggagcaca tatcgcgact atcccaggaa gccttttccc gaaactttgg tctcatcctt
     5701 tgactgataa aggtattgaa ggatttttaa aagattggga agcgttcagt cagaaagaag
     5761 gcaattaata tgagcagaat tgatgaacaa atggttaact cgattcgcgt attatcaatg
     5821 gatatgattg aaaaagcgaa ctccggccat cccggtttgc cgatgggagc cgcaccaatg
     5881 gctttctcgc tttggaaaaa tcatttaaaa ttcaatccag aacacccaac ttggtttaac
     5941 cgcgatcgct tcgttttgtc agctggtcac ggttcggcaa tgctttatag tttgctacat
     6001 ctatttggtt atgatttacc aatgagcgag ctgaaaaact tccgccaaac tggtagtaaa
     6061 acgcccggtc atcctgaatt cggtcatacg gttggtgtcg atgcaactac cggtccactt
     6121 ggtcaaggtt tcgcaatggg agttgggatg gcaatggccg aggctcacct tggcgccaaa
     6181 tttaaccaac ctgaattccc ggttgttgac cataatacct acgtgctatg cggagacggc
     6241 tgtttgatgg aaggcatttc ctacgaagcc gcatcccttg ctggtcattt aaaactggga
     6301 aaattagttg ttttatatga ttcgaatgat atctcactgg atggcgattt aaacgagtct
     6361 ttttcagaag acatcgaact cagattccga gcagccggtt ggcaaacgct acgtgtggac
     6421 gacggaaatg acttagatgc gcttgatgca gcaatccatc tcgcaaaaac cgagaaatcc
     6481 cgccctactt taatcgaagt gaaaacggtc atcggttacg gtagccctgg taaagccgga
     6541 aaatcggcgg cacacggctc cccacttggc gaaaaagaac tcaaacttgc aaaagaagct
     6601 tacgattggc aaatgccacc ttttgaatta ccaaaaactg tcgaaaatca gaaagaattt
     6661 tatcattcta aaggtcgcgc gagtgaaagc agctggctcc ggacattcaa tgcttacaaa
     6721 caaaaatatc cagcactcgc agaaagtttg caacaattaa tggatgataa tttggatgcg
     6781 gattgggatg cagaacttcc tgtcttcgat gaaaatgcgg ataaagccgt tgcaacccgt
     6841 gaagtatcag gaattgttct acaagaattg gagaaaaaac tgcctaacct atttggtggc
     6901 gcggccgatt tggcctcctc caataaaacc catttaaaag ctagcgaacg gtttgctcca
     6961 ggtaactatg ccgccaaaaa tatctcattc ggcgtccgcg agttcgcaat gggagcagca
     7021 gtcaacggaa tgacgcttca cggcggtgtt caagctttcg gcgcaacctt cttcgtattc
     7081 tcggattatc tacgttccgc gattcgttca gcagctttaa tgggcattcc atccactttc
     7141 atcatgaccc atgattccat cgcagtcggt gaagacggtc caacgcacga accaatcgag
     7201 catctcgcat ccttccgcgc catgccggga cttcacgtca tccgaccagc tgacggcaac
     7261 gaaaccgtcg aagcataccg ctatgccttt actcaaaaag aacaaccaac catgctcgtt
     7321 cttagccgcc aaaacctgcc aattttacca aatagcgcag caaaagcgca aaccggactt
     7381 gcaaaaggtg cttacatctt agccgattcc ccgcttgata aactagatat tatcttactc
     7441 gcttctggat ccgaagtaca cctaatgaca gctgtcagag ataatctcgc taaaaaaggc
     7501 ttcggagcac gcgtagtcag catgccaagc tttgatttat tcgacaaaca aagccctgaa
     7561 tataaagagt ccgttttacc aaaagcagtg aaaaatcgct tcgccgcaga aatgggcgca
     7621 tcatacggct ggcacaaata cctcggcgac acaggccaaa tcctcgcgat tgattcgttt
     7681 ggtatgtctg gcccgggaga tgagctagca agacgatttg gctttactgt agagaacttg
     7741 acggagcttg cgttgaagca gttgtaggta tggaataaac tttttaacag taaccaatca
     7801 agtactcggg cataaaaaag caggcattct ctatttagaa agaagagaat gcctgtattt
     7861 atttgactag aaatcaattt cccactttac tcagcgccat taagcttaga taaatcagca
     7921 agtagcggtt tcccatctgc atccaaaagt ggtgacattc cacccgcata accagacaaa
     7981 tggtaaacat attgcacacc ggtttcttta tcaacccaaa tttccataat gttgagtttt
     8041 ccttgggtat aaattttttc aaatctttct tccattgttt tccgcctcct gttttaaggt
     8101 tgcacgcatt attccaccct aaatcaattt aatttccgaa tcaaaatatt gctcaataaa
     8161 atgtactt
//
LOCUS       DASDYO010000128         8108 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.128, whole genome shotgun sequence.
ACCESSION   DASDYO010000128 DASDYO010000000
VERSION     DASDYO010000128.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 8108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 8108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..8108
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.128"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            7..1919
                     /locus_tag="U0290_002532"
                     /pseudo
     CDS             7..1919
                     /locus_tag="U0290_002532"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009928843.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
     gene            2042..3400
                     /locus_tag="U0290_002533"
     CDS             2042..3400
                     /locus_tag="U0290_002533"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HEM2302566.1"
                     /translation="MKKMLPESKVEAIRKEGFLNRAVEAYRFFYPTVSNVSNFKALND
                     LGITENHDFIIQLTTPDLNVLTQNSDTPYCLGTGNTENGPVVIELPQGAIVGVADDIN
                     FKFITNMGLTGDEQGKGAKYLYLPPNYDGDIPEGYIVRKPSSYRFLICLRAMVHQASD
                     YEKAFELLKKVKFYPLEEKDNNPTSTFHDFSHRKAISTPYYVEGKFDYWEVIKWALDN
                     DETDPEYYQMYGLLKAIGLAPNKEFNPDPDKKALLIEAAEKADKMMFVNSFNTDDPAA
                     IVWPGKNWEWAVYGENNDFYEKTYLNLPVRERWFYQATLETHMMFMHKVGFGSVYMLG
                     VKDKEGNYLDGGKSYTLKVPTPVPTSIFWSVTVYEMDTRSEIVTEQFMPALNSIKDTF
                     EVDADGNTTLYFGPNPPEDESLPWIQTVPDANWFTYFRIYGPTKPAFDSSWQLDDFEE
                     VK"
     gene            complement(3443..4036)
                     /locus_tag="U0290_002534"
     CDS             complement(3443..4036)
                     /locus_tag="U0290_002534"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464767.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI family protein"
                     /protein_id="HEM2302567.1"
                     /translation="MAKTELNPKVDAFLSKPSTWQAEFKALREIAITFELEEEFKWGK
                     PCYAINGSNVFLIHGFKNYCALLFMKGALLRDPENILVQQTENVQAARQIRFTNLQEI
                     LDQKEFLKAYIQNAIEVEKAGLEVELKPREETPIPEELLAKFEEMPALQTAFEALTPG
                     RQKAYLLYFAAPKQSKTRVSRIEKYEATILDGLGLND"
     gene            complement(4173..4580)
                     /locus_tag="U0290_002535"
     CDS             complement(4173..4580)
                     /locus_tag="U0290_002535"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glyoxalase/bleomycin resistance/extradiol
                     dioxygenase family protein"
                     /protein_id="HEM2302568.1"
                     /translation="MTLNVYLNFRTQSRDAIAFYEEIFGTKCTDLMTYGEIESREEPI
                     EDSLKDLVMNASLVMDGVKVMFSDVPKSMPLTFGDNITLVIDTSDEIKLTKQFHQLAE
                     GGNIVMPLGKTFWSEKYGQVTDKFGVGWQLNLS"
     gene            4745..5344
                     /locus_tag="U0290_002536"
     CDS             4745..5344
                     /locus_tag="U0290_002536"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2302569.1"
                     /translation="MKKTLYLIRHGQTLFNQRKKIQGFCDAPLTELGIKQAKIAASYF
                     KENNITFDQAYSSTSERASDTLELITDKSYQRLKGLKEWNFGTFEGESEDLNPPLPYG
                     DFFAAYGGEREVDFRDRLVATMERIMSQDNHDTVLAVSHGAACAQFARYWEKTSKIGK
                     VTGLKNCCILKFEYENGRFTLVNFINHDFENGTHIESTK"
     gene            complement(5376..5636)
                     /locus_tag="U0290_002537"
     CDS             complement(5376..5636)
                     /locus_tag="U0290_002537"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302570.1"
                     /translation="MNLDDLKNKVTESLPLENLGTLTEEATNKASELGEQASNVTENL
                     QNEATNLTENLQDKTSGLTENLQDTANELTGGFLDKIKNLFQ"
     gene            5760..7172
                     /gene="dbpA"
                     /locus_tag="U0290_002538"
     CDS             5760..7172
                     /gene="dbpA"
                     /locus_tag="U0290_002538"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent RNA helicase DbpA"
                     /protein_id="HEM2302571.1"
                     /translation="MNNLKLSEEIKRAINELGYTEATPVQKAVIPVALTGEDIVAKSQ
                     TGSGKTAAFAIPIAEQIEWEENKPQALIIVPTRELAMQVKTECTNIGRFKRVKAAAIY
                     GQSPFAKQKLELSQKNHIVVGTPGRLLDHIEKGSLNVDKVAHLVLDEVDEMLSMGFID
                     QVEDILSRLPKQRQNLFFSATMPEEMQDLIKRYQDDPMVIEMASEKTNPIFHVEMQTD
                     NKEKTLKDVLITENPDSAIIFCNTKNQVDELTDLLDVKVSKIHGGLRQEDRFRAMDDF
                     KSGKSRFLIATDVAGRGIDVDNVSLVINYDLPIEKENYVHRIGRTGRAGKSGKAISFV
                     KTNENPLLRDIEEMLDVTIEKKRKPTVIEVKANEEAFRKKQQKRPTIKKARGEKLNKN
                     IMKLYFNGGKKKKIRAVDFVGTISKLEGITAEDIGIITIEDHVSFVEILNGKGPAVLE
                     MMRSRKVKGRRLKVNEARKR"
     gene            7197..7460
                     /locus_tag="U0290_002539"
     CDS             7197..7460
                     /locus_tag="U0290_002539"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3116 family protein"
                     /protein_id="HEM2302572.1"
                     /translation="MERPDNQLILMVLEVVKNPLYNIKSLTINFLQGDIVGNSTRNEL
                     LYCTYWLEFHGFILRDEKGDNQKYYSMTKQGDFLLQKIKNELS"
     gene            7628..8104
                     /locus_tag="U0290_002540"
     CDS             7628..8104
                     /locus_tag="U0290_002540"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="8-oxo-dGTP diphosphatase"
                     /protein_id="HEM2302573.1"
                     /translation="MYKYTLCFIQRADEILLLNRQKSPWMGSWNGVGGKIEQGETLLE
                     SVQREITEETGISSNDYEIRDIGEMKWFVDGENLGGMHLFLANLPDNYVYPTPRATDE
                     GILDFKKRKWILNPENTGVVNNLPYIIKHAPVFPARIEVSTKYHENTLLHINHQSL"
BASE COUNT         2868 a         1365 c         1547 g         2328 t
ORIGIN      
        1 aaccaaatta ccaatataaa tatgcttgat gatttcccag aaatgactac tttaaatatt
       61 gatttaaact ccgtcagtgt tttaccaagt aaccttaaaa caaagatgcc aaaactatcg
      121 agaattagtg cattaaatca aacagttact ttagataaag caattgtagt ggatgattcc
      181 gatttaatta ttaataatga gattagtaat tttggaaagt taaccgatcc aagcccaata
      241 tcaaattttg gaacttacgc aaatgaaaaa ataacttggt cgtctgaaag aattaaaaat
      301 ttaacagagg ttagttttaa gttttctgag ctaattaatg tgactggtat agatggaact
      361 ttttcaggaa aagtaacaca accatttaaa aaatcaacta caccagtaat taatgcagat
      421 tccgaaattc attatccgca agggacaaaa aaacagaagc agagttttta aaggatattc
      481 aagcgcaaac aacggatgat ttatccatta aaagcgattt tgaaataatg gtgaatctca
      541 agaaagtagg aaaatacaca gtaatattaa acgtagagaa tatggatgga attaaagcta
      601 atccaaaaga agtgactgtt tatattgatg ctgtacaagg tgcaaatata actgtgaaat
      661 atgaagacaa atcagggaat aaacttgcag aaaatagcat attaactgga aatgtcggtg
      721 aagaatatag ttcaagtgaa aaagaaattt taggttatac actaactgaa attccaacaa
      781 atgcacaagg agaatttagt ttagaagaac agactgtgac atatatctat tcgaaaaatc
      841 ccgttccagc taaagacatc acggtacaat ataccgataa agatggaata gaactagcac
      901 caaccgaaac attatcaggt aatgttgatg aaaattatgt tacaacagcg aagaatttta
      961 caggatacga attaattgaa actccgagca atgcagaagg aaagtttagc gaaaatgcac
     1021 aaacagtgac ctatgtgtat cgcgcgatta aagcagatcc aattttagca aaagaagtta
     1081 cggtgaacta ccaggacgaa ttaggagcta aaattagtga aacggaagta ttaactggtg
     1141 aaattggtga aacatacaca acagtggcta aaacaataga tggctatacc ttaattaaga
     1201 gccctattaa cgctagcggg atttttaacg aaaatcctca aacggttacc tatgtgtatc
     1261 aattacaaaa caacccaata acagcaaata tcactgttaa acacttggat gaaaacaaca
     1321 atgagctagc accgagtgag gtactaagtg gaattgtcga tgaagcatat acaactaatc
     1381 caaaagaaat aaaagactat tcgctagtaa aagtaccaac taatgctagc ggaaaattca
     1441 cgacagaagc acaaacggtg atttatcact ataaaaaaaa cagtatacag acatcatctt
     1501 atattactgt aaaatatgta gatgaaacag ggaaagagct ggccataagc gaggtattaa
     1561 acggaaacat taatgattcc tacgcaacta cagctaagga aattaaaggc tacacgctag
     1621 tggaaaagcc cgctaatgca actggtaaat ttacagatca ggatcaaact ataaaatatg
     1681 tatatcgtgc taatacagat gaagtaaatc tagacccaga tgtaccagcg agaaatccca
     1741 atggagatat tcaaccaatg aatggtgccc aaccaccaat tgaggttcca aaatccctgc
     1801 ctaaaacagg tagccagccg gcaaatttga tctttggatt aggagtttta ctagtgtttc
     1861 ttagtaccca atggctacat cgagataaaa gaaaaaaaga taaatctcat aactgctgat
     1921 aacatttctt gacaaaactc tccttatcct aaggagagtt ttttacttta cgcttgaaca
     1981 ttcaaaaaca agggtattag ttaagtgttc taaaaaaagc taattgaagg aggtttttta
     2041 catgaaaaaa atgctacctg agagtaaagt agaggcaatt agaaaagaag gatttttaaa
     2101 tcgagctgtt gaggcatatc gatttttcta tccaactgtg tccaatgtgt ctaattttaa
     2161 agcattgaat gacttaggga ttacagaaaa tcacgatttc attattcaac tcacaacgcc
     2221 tgatttaaat gtattgacgc aaaactcaga tacaccatat tgccttggaa cgggaaacac
     2281 cgagaatggt ccagttgtta tcgagttgcc acaaggcgct atcgttggtg tggctgacga
     2341 tattaatttt aaatttatta cgaatatggg attaacaggg gacgagcaag ggaaaggcgc
     2401 gaaatatttg tacttaccac ctaattatga tggggatatc ccagaaggct acatagtacg
     2461 caaaccttca agctatcgtt tcctcatttg tttacgagcg atggttcacc aagcaagtga
     2521 ttatgaaaaa gcatttgaac tcctgaaaaa agtgaaattc tatccattag aagaaaaaga
     2581 taataatcca accagtacat tccatgattt ttcgcatcga aaagcgattt cgacaccata
     2641 ttatgtcgaa ggaaaatttg actattggga agtaattaaa tgggcgctgg ataatgatga
     2701 aacagatcca gaatattacc aaatgtatgg cttactaaaa gcaattggtt tagctccaaa
     2761 taaagaattt aatcctgatc cagataaaaa agctttatta atagaagctg ccgagaaagc
     2821 agacaaaatg atgtttgtga attcctttaa tacagatgat ccagctgcta ttgtttggcc
     2881 aggaaagaac tgggaatggg ctgtctatgg tgagaataat gacttctatg aaaaaacgta
     2941 tttaaatctt ccggtaagag agcgttggtt ctatcaagcg acactcgaaa cacatatgat
     3001 gtttatgcat aaagtcggat ttggttccgt ttatatgctt ggagtgaaag ataaagaagg
     3061 aaactatctg gatgggggca aaagttatac attaaaagtg ccaacaccag tgccaacgag
     3121 cattttctgg tcggtaacgg tttatgagat ggatactcgt tcggaaattg tcacagagca
     3181 atttatgcct gcgcttaact ccatcaaaga tacgtttgaa gtagatgctg acggtaatac
     3241 aacactttac tttgggccaa atcctccaga agatgagtcg cttccatgga ttcaaactgt
     3301 tccagatgcc aattggttca cgtatttccg tatttacgga ccaaccaaac cagcctttga
     3361 tagcagttgg caattagatg attttgaaga agtaaaataa ataaaaaagc gcaaccttca
     3421 cgcagggtgc gctttttttc gattaatcgt ttaatcctaa tccatctaaa atcgttgctt
     3481 cgtatttttc aatgcgcgaa acacgcgttt ttgattgctt tggagccgca aaatagagca
     3541 agtaagcttt ttgacgacca ggagttaagg cttcaaaagc tgtttgtagc gcaggcattt
     3601 cttcaaattt agcgagtaat tcttctggaa taggcgtttc ttcccttggt ttaagttcca
     3661 cttctaaccc agctttttct acttcaattg cattttgaat atacgccttt agaaattctt
     3721 tttgatcaag aatttcctgt aaatttgtga agcggatttg tctggcagct tgcacatttt
     3781 ctgtttgctg aactaaaatg ttttccggat cacggagtag tgcgcctttc ataaagagta
     3841 gtgcacagta gtttttaaaa ccatgaatta agaaaacgtt gctgccatta atagcgtaac
     3901 aaggtttccc ccatttgaat tcttcttcta gttcaaacgt gattgctatt tctcttaatg
     3961 ctttgaattc agcttgccaa gtggatggtt tacttagaaa cgcatctact ttaggattta
     4021 attcggtttt tgccataaag aattcctctt ttccacactt tttctttgat acgtgttatt
     4081 ttaacttaat aagaaaggcc ttgcaaattt ggtcggccta ctaaaaatgg acttaaagaa
     4141 agaacctgag ttttatccca gattctctta atttaagata aattaagctg ccaaccgacg
     4201 ccgaatttat ccgtcacttg cccatatttt tccgaccaga atgttttgcc aagtggcatg
     4261 acaatattgc caccttctgc aagctgatgg aattgtttgg ttaattttat ttcgtcagat
     4321 gtatcaatta ctagtgttat attgtctccg aatgtgagcg gcatagactt tggaacatct
     4381 gaaaacataa cctttactcc gtccattact aaactagcat tcatcactaa atctttgagc
     4441 gaatcttcta taggttcttc tctggactcg atttccccat atgtcatcaa atctgtacac
     4501 tttgttccaa aaatttcttc ataaaacgcg atagcatctc tggattgtgt tctaaaattc
     4561 aagtaaacat tcaacgtcat ttgaattcct cctcgatttt tattcgctaa agttctattc
     4621 attttggtgt ttttattata gcagatactg cgtgaaagag gaaaaattaa gaagataaat
     4681 acttgacttg gagctactcc agggtgataa actaaggaga agatatagat tcggaggaat
     4741 ttagatgaaa aagacattgt atttaatacg ccatggtcaa acattattta atcaacgtaa
     4801 aaaaattcaa ggtttttgcg atgcaccact taccgaactc gggattaaac aagcaaaaat
     4861 cgctgctagt tactttaaag aaaacaatat aacattcgat caagcttaca gttccacatc
     4921 agagcgcgca tctgacacgt tagagctgat tacggacaaa agctatcaac ggttgaaagg
     4981 tttgaaagaa tggaattttg gtacttttga aggcgagagc gaagacctaa atccaccgct
     5041 accatatgga gatttttttg ctgcgtatgg gggagagcga gaagtggatt tcagagatcg
     5101 tttagtagca acaatggaac gtatcatgag ccaagataat catgatactg tccttgccgt
     5161 ttctcacgga gctgcctgtg cccaatttgc tagatattgg gaaaaaacaa gcaaaattgg
     5221 caaagtaaca ggactgaaga attgctgcat tttaaagttt gaatatgaaa atggcagatt
     5281 tactttagtt aattttatta atcatgattt tgagaatgga acgcatatag aaagcactaa
     5341 ataaaaaagc actcgtcatt gagtgctttt tcgcttcatt gaaacaaatt ctttatttta
     5401 tccaaaaatc caccagttaa ctcattcgca gtatcttgca agttttccgt aagtccactt
     5461 gttttatctt gtagattttc tgttaggttc gtcgcttcat tctgtaaatt ttctgtgaca
     5521 ttacttgctt gttcaccaag ctcagatgct ttgtttgttg cctcttctgt cagtgttcct
     5581 aggttttcca ggggcaggga ctcggtaact ttattcttca aatcatctaa attcatcttt
     5641 tcctccttat tttgggggct tagagttcat tctaaaggaa ggagggataa agtacaaaca
     5701 attcgttcca tcatttgtga aaaaatatgg tatgatgata tgaggaaatg aggactgaca
     5761 tgaataattt aaaattaagt gaagaaatta aaagagcgat taatgaacta ggatatacag
     5821 aagcaacacc cgttcaaaaa gcggtaattc cagttgcctt aacaggagaa gatattgttg
     5881 ctaaatcaca aactggtagt gggaaaacag cagcattcgc tattcccatt gcagaacaga
     5941 ttgaatggga agaaaataag ccacaagcac taatcatcgt tccaacacga gaacttgcaa
     6001 tgcaagtcaa gacagaatgt acgaatattg gacgatttaa acgtgtcaaa gctgcagcaa
     6061 tatacggaca atcaccattt gcgaaacaaa aattagaact aagccaaaaa aatcatatcg
     6121 tcgttgggac gcctggtcgc ctgctggatc atattgaaaa aggatcactg aatgtcgaca
     6181 aggttgccca tttagtttta gatgaagtag atgaaatgtt aagcatggga tttattgatc
     6241 aagtcgaaga tattcttagc cgtttaccaa aacagcgcca aaatctattt ttctcagcaa
     6301 ctatgccaga agaaatgcaa gatttgatta aacgctacca agatgatcca atggtaatcg
     6361 aaatggcatc ggaaaaaaca aaccctatct tccacgtgga gatgcaaaca gataataaag
     6421 aaaaaacgct aaaagatgtt ttgattacag aaaatccgga tagcgcaata atattttgca
     6481 atacgaaaaa tcaagtcgat gaactcaccg atttacttga tgtaaaagtt agtaaaattc
     6541 atgggggttt aagacaagaa gaccgtttcc gagcaatgga tgattttaaa agtggcaaat
     6601 cccgtttctt aattgcgaca gatgtggcag ggcgcggaat agatgtggat aatgtatcgt
     6661 tagtcattaa ctacgattta ccaattgaaa aagaaaatta tgtacatcgt atcggtcgta
     6721 ctggtcgcgc tggcaaaagt ggtaaagcta ttagtttcgt gaaaacaaat gaaaatccac
     6781 ttttgcgtga catagaagaa atgctcgatg ttacaatcga aaaaaaacgt aaaccgacag
     6841 tgatagaagt gaaagctaac gaagaagctt tccgcaaaaa acaacaaaag cgcccaacaa
     6901 tcaaaaaagc tcgtggggaa aaattaaata aaaacattat gaaactgtat tttaatggtg
     6961 gaaaaaagaa aaaaattcgt gcagtagatt ttgttggaac tatttctaaa ttagaaggaa
     7021 ttacggccga agatatcgga attattacga ttgaagacca tgtttctttt gttgaaattt
     7081 taaatggaaa aggtccggca gtactggaaa tgatgcgctc tcgtaaagta aaaggtagac
     7141 gcctgaaagt aaacgaggcc agaaaacgat aaattaaaga aaagaaggtc caaacaatgg
     7201 aaaggccaga taatcaactt attttaatgg tgttagaagt tgttaaaaat ccactttaca
     7261 atataaaatc actaacaatt aattttctgc aaggtgacat cgttgggaat tcaacaagaa
     7321 atgagttgtt atactgcact tactggcttg aatttcatgg ctttattctt cgtgacgaaa
     7381 aaggggataa ccaaaaatac tatagcatga ccaaacaagg agattttcta cttcaaaaaa
     7441 ttaagaatga actttcttag tttgttcata cttttttaac atttattcgt tatattaaga
     7501 gtaacctttt tttcaatgaa atatctcacc tggcagcatc cgtctcccaa taaaaacgcg
     7561 gatgctgctc tttttgtgcc tgaaattatg atatactgaa taaaaaactt ggaaaatagg
     7621 tggaaatatg tataaatata ccctttgttt tatccaaaga gccgatgaaa ttctattgtt
     7681 aaatagacaa aaatccccat ggatgggaag ttggaatggt gttggtggca aaattgagca
     7741 aggggaaaca cttcttgaat cggtccaacg ggaaatcaca gaagagaccg gaatttcctc
     7801 aaatgactac gaaattcgtg atatcggtga aatgaaatgg tttgtggatg gcgaaaatct
     7861 gggaggtatg catttatttc tggccaatct tccggataat tatgtatatc caacacctcg
     7921 tgcaaccgat gaaggaatac ttgattttaa aaaaagaaaa tggatactta atccggaaaa
     7981 tacaggtgta gtgaacaatt taccttatat aatcaaacat gctccagtgt tcccggctag
     8041 aatagaagtt tcaacaaaat atcatgagaa cacattattg catattaatc atcaatcttt
     8101 ataaaaaa
//
LOCUS       DASDYO010000129         7864 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.129, whole genome shotgun sequence.
ACCESSION   DASDYO010000129 DASDYO010000000
VERSION     DASDYO010000129.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7864)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7864)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7864
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.129"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..646)
                     /gene="mecA"
                     /locus_tag="U0290_002541"
     CDS             complement(<1..646)
                     /gene="mecA"
                     /locus_tag="U0290_002541"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465714.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="adaptor protein MecA"
                     /protein_id="HEM2302574.1"
                     /translation="MEIERINEDTIKFYISYLDLEERGFNQEDVWYDREKSEELFWDM
                     MDELKYEEEFSPEGPLWIQVQALKHGLEVFVTKATIGGKGEDGFDVTLSSPDELAEEK
                     IEKLLEENFNPVKKEALGDDDTLEFILEFRDFEDAISLSRATGLENLVTKLYSYQGKY
                     YLNVEFPENKYDESNIDNAVSILLEYGLESNLTGYMLAEYGKVIFDVPALKQIRK"
     gene            complement(879..1274)
                     /gene="spxA"
                     /locus_tag="U0290_002542"
     CDS             complement(879..1274)
                     /gene="spxA"
                     /locus_tag="U0290_002542"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465715.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator Spx"
                     /protein_id="HEM2302575.1"
                     /translation="MVTLYTSPSCTSCRKARAWLEEHDIPYKERNIFSEPLSLDEIKE
                     ILRMTEDGTDEIISTRSKTFQKLNVDLDSLPLQQLFELIQKNPGLLRRPIIIDEKRLQ
                     VGYNEDEIRRFLPRRVRTYQLREAQKMVN"
     gene            complement(1594..2562)
                     /locus_tag="U0290_002543"
     CDS             complement(1594..2562)
                     /locus_tag="U0290_002543"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465716.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2302576.1"
                     /translation="MTEQREKLLEIHNLKQYFNKGTASEVRAVDDISFDIYKGETLGL
                     VGESGCGKSTTGRTIIRLYDATGGEVIYNGKNVHARKSRKEMLEFRRKMQMIFQDPYA
                     SLNPRMKVKDIIAEGIRIHGLAKTPEETNKQVYDLLETVGLSKEHAGRYPHEFSGGQR
                     QRIGIARALAVQPEFIIADEPISALDVSIQAQVVNLLRQLQKEKNLTYLFIAHDLSMV
                     KYISDRIGVMYFGKLVELAPANDLYHAPLHPYTESLLSAIPLPDPNYERTRVRKTYDP
                     TSHNYKDGDEIKMREIAPGHFVYCSEEEEVMYKEKHAKLTAEAAAK"
     gene            complement(2559..3635)
                     /locus_tag="U0290_002544"
     CDS             complement(2559..3635)
                     /locus_tag="U0290_002544"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465717.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302577.1"
                     /translation="MEKLLEVKDLNISFHTYAGEVKAIRGVNFDLYKGETLAIVGESG
                     SGKSVTTKSIMRLLPEGNSEIKSGQILFNGMDIAKAHEKQMQKIRGKDIAMIFQDPMT
                     SLNPTMTIGKQISEPLIKHQKISKHEAHKTALRLLQLVGIANAEERIKQYPHQFSGGM
                     RQRVVIAISLACNPQILIADEPTTALDVTIQAQILDLMKDLQKKIDTSIIFITHDLGV
                     VANVADRVAVMYGGKIVEIGTVDEIFYNPQHPYTWGLISSMPTLDTDDEELFVIPGTP
                     PDLLHPPKGDAFAARNKYAMQIDLEEEPPLFKVSDTHYAATWLLHPDAPEVTPPDAVL
                     RRQEQFAELHPGMQAVHAKGVEVE"
     gene            complement(3653..4687)
                     /locus_tag="U0290_002545"
     CDS             complement(3653..4687)
                     /locus_tag="U0290_002545"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465718.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302578.1"
                     /translation="MAEHKIAKERFQPAHILDAEAEKINRPSLTFLQDSWLRIRKNKA
                     ALVSLIVLALVIIMAIVGPYLSQNLGPKHDINRQITENASLPPKVQGFENMPFWNGHQ
                     SIGGEDVDIYKQNNIKEGTYYWLGSDTLGRDQFARIWAGTRVSLIIAVVAALCDLIIG
                     VAYGLISGYVGGRVDNFMQRVLEVIGAIPNLVVVILMMLILEPGIVSIIIAIAMTSWI
                     TMARVVRGQVLKLKNQEFVMASMTLGESTPKILIKHLIPNISGIIIINIMFSIPSAIF
                     FEAFLSFIGLGLPAPAASLGVLVNDGYKTLQVLPYMILYPCIVLCIIMIAFNLIADGL
                     RDAFDPKMRD"
     gene            complement(4687..5616)
                     /locus_tag="U0290_002546"
     CDS             complement(4687..5616)
                     /locus_tag="U0290_002546"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465719.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302579.1"
                     /translation="MVKYTLKRVLYMLITLFIIASVTFVLMKFLPGTPYRNQEKLSDE
                     QIHMMNEKYGLNDSIPVQYLNYMTGLVKGDLGVSFQLDNRPVSEILSALIGPSVQLAL
                     EAMAFGVIFGILLGVIAAMYQNRWPDYTSTFIAILGKSVPSFVFATVLQYWLGAKLQI
                     FPVAGWGTFADTILPAFALAMFPLATAARFMRTELIDVFASDYVLLAKAKGNSRTEVA
                     VKHAIRNALIPLITVLGPLSVALMTGSLVIENIYSIPGIGSQFVSSIQTNDYPVIMGT
                     TILFAVMLVFVILVVDILYGLIDPRIRVSGGRK"
     gene            complement(5895..7571)
                     /locus_tag="U0290_002547"
     CDS             complement(5895..7571)
                     /locus_tag="U0290_002547"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465720.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2302580.1"
                     /translation="MKKSKLFLTLGLTLLLSLVLVACGGGSDSKSDKKGSDSGKASGE
                     QVLNLTESALIPSADSTKADDQVGLNVVNQTNEGLYALDKDGIPAIAGAAEEPKVSDD
                     KTVYTIKLREDAKWSNGDPVTANDYVYSWRRAVDPNTAATYSYLFDAIKNGGDIVAGK
                     KKPEELGIKAVDDYTLEVTLSKPTAYINSLFAFPTFFPLNEKFVTEKGEKYAQNSDNM
                     LFNGPFELKDWTGTNKKWTYVKNDKYWDKDKVKLKQINVQVVQDSGTGLNLYNTDKVD
                     RTVLSADYAAQNKNNKDYVTVNDSSTFYIKFNQKRAGKDTVFANKNIRKAIALAIDKQ
                     SYTDTVLKNGSKPANNLVPEGFTFDPGNKEDYTKESGKHLEYDVKEAQKAWKAGLKEL
                     GVNEITVEFTSDDTENARKSSEFIQDQLQKNLDGLTVKLKNVPFKVRLQNDQNQDYDF
                     SMSGWGPDYQDPSTFLDLFVTDGAQNRMSYSNKDYDKILNDASVTYAADDQKRWDEMV
                     KAEKILLTDDVAIQPLYQRSTAYLQKDYIKNLQKNPFGPDYTYKETYLTK"
BASE COUNT         2421 a         1503 c         1300 g         2640 t
ORIGIN      
        1 gttttctaat ttgctttaat gcaggaacgt caaagattac ttttccgtac tcagctagca
       61 tataaccagt taaattcgac tctaaaccgt actcaagcaa aatactaacg gcattgtcaa
      121 tgttagattc atcatattta ttctcaggaa attctacatt caaataatac tttccttgat
      181 acgagtatag cttagttact aaattttcta gtccagtcgc tcgtgaaaga gaaatagcat
      241 cttcaaaatc acggaactct aaaataaact ctagtgtatc atcgtctcca agtgcttctt
      301 tcttcactgg attaaagttt tcttcgagta gtttttcgat tttttcttct gcaagctcat
      361 ctggcgagct aagcgtgaca tcgaagccat cttcgccttt tccaccaatt gtagcttttg
      421 ttacgaatac ttctaagcca tgttttaagg cttggacttg tatccagagc ggaccttccg
      481 gagagaactc ttcttcatat ttcagctcat ccatcatatc ccagaaaagc tcttcacttt
      541 tctcgcgatc ataccaaaca tcttcttggt taaaacctcg ctcttccaaa tccagataag
      601 agatataaaa cttgattgta tcctcattaa ttcgttcaat ttccatcgtc acactctccc
      661 ttccttctta gtcattgaca atgaagggta aaacttaatt ggttaaattc attgtagctc
      721 atattaagaa atagtaccac catttttcct tcgatttgct tggtggaatc ttatcttagc
      781 tgaaaagcga aaaaaattca agaacattta cttaaactac aaaaaaaagc gccaagaatc
      841 caattgaatg gaatccttgg caaccacttt tatcaatctt agttaaccat tttttgcgct
      901 tcacgtagtt gatacgtacg tacacggcgc ggtaagaaac ggcgaatttc atcttcattg
      961 tacccaactt gcaaacgttt ttcatcaata atgataggac gtcttaataa gccaggattt
     1021 ttctggatta attcaaatag ttgttgcaaa ggaagactat ctaaatccac gttcagtttt
     1081 tggaacgttt ttgaacgagt ggaaataatt tcatctgtac catcctcagt catacgaaga
     1141 atttctttaa tttcatccaa actaagtggc tcagaaaaaa tgtttctttc cttataaggg
     1201 atatcatgtt cttccaacca tgcacgagct tttcggcaag atgtgcaact aggtgaagtg
     1261 tataacgtta ccattagaca ttcacactcc ttatcgggta ttgtttcatt catataacga
     1321 aattctagca atatctctat ttggaaaatt cattaaagaa cttacacttc attatacact
     1381 aattttgtga aattccatat actattttca aaaattttct ttccaaatat gtaaaaccat
     1441 tgttagcaag ccgttatgta tatgataccc ctactataac ttgtttaaac taaaatcaca
     1501 tgaaaaaaat agctttttta tgagaatttc atgagaattt taattttgta aaaaaaacat
     1561 caatcaaatt ttactctgat tgatgttttc ctattatttc gcagcagctt cagcagttag
     1621 cttagcatgc ttttctttat acataacttc ttcttcttct gaacaataaa caaaatgtcc
     1681 aggagcaatt tcgcgcattt taatttcatc gccatcttta tagttatgag acgttgggtc
     1741 atatgtttta cgcacacgag tacgttcata atttggatct ggcaacggaa tcgcggataa
     1801 aagtgattct gtataagggt gtagcggcgc atgatacaaa tcatttgctg gcgctaactc
     1861 tactaattta ccgaagtaca ttacgccaat acgatcacta atgtatttaa ccattgataa
     1921 atcgtgggca atgaataggt aagttagatt tttttctttc tgcaattgac gtaataagtt
     1981 tactacttgc gcttggatag atacatctag tgcggaaata ggctcatcgg caataatgaa
     2041 ttctggttga acagcaagcg cacgagcgat accaatacgt tgacgttgac cgccggaaaa
     2101 ctcatgtgga taacggccag catgttcttt acttaatcca actgtttcta acaaatcgta
     2161 tacttgttta ttcgtttctt caggtgtttt agcaaggcca tgaatacgaa taccttcagc
     2221 aatgatatct ttaactttca tacgcggatt taaagatgcg tatggatctt ggaaaatcat
     2281 ttgcatttta cgacggaatt caagcatttc tttacggctt ttacgtgcat gcacattttt
     2341 accattatag ataacttctc cgccagtagc atcgtataaa cgaatgatag tacgtccagt
     2401 tgtagattta ccacaaccag attctcctac taaaccaagt gtttcacctt tataaatatc
     2461 aaaagaaata tcatcaaccg cgcgtacttc acttgcagta cctttgttga agtattgttt
     2521 tagattatga atctctaata atttttctct ttgttcagtc attctacttc tacccctttc
     2581 gcatggacag cttgcatgcc aggatgaagt tccgcaaact gctcttggcg acgtaataca
     2641 gcatcaggtg gcgttacttc tggcgcatca ggatgaagca accatgtagc cgcataatgt
     2701 gtatcagaca ccttaaatag tggtggctct tcttcaaggt caatttgcat tgcgtattta
     2761 ttacgcgcag caaatgcgtc cccttttgga ggatgaagta aatcaggtgg cgtaccagga
     2821 ataacaaata attcttcatc atctgtatcc aaagtaggca tagagctaat tagtccccat
     2881 gtataaggat gttgtggatt atagaaaatt tcatcaactg ttccgatttc aacaatttta
     2941 ccaccgtaca taacagctac acggtctgca acatttgcta caacaccaag gtcatgggta
     3001 ataaagataa tcgacgtatc aatttttttc tgtaagtcct tcattaaatc taaaatttgc
     3061 gcttggatag ttacatctag cgctgttgtt ggctcatctg caataagaat ttgtgggtta
     3121 catgcaagtg aaatcgcaat aacaacccgt tgacgcatcc cacctgaaaa ttggtgagga
     3181 tattgtttaa ttctttcttc tgcgttggca ataccaacta attgaagtaa acgaagtgct
     3241 gttttatgtg cttcatgttt actgattttt tggtgcttaa taagtggttc agaaatttgt
     3301 ttaccaattg tcatcgtagg atttaatgat gtcattggat cttggaaaat catagctata
     3361 tctttcccac gaattttttg catttgtttt tcgtgagctt tagcgatatc cattccgtta
     3421 aataaaattt ggccactttt aatttctgag ttaccttctg gaagtaaacg cataatcgat
     3481 tttgtcgtta ctgatttacc agaaccagat tcgccaacaa tcgctaaggt ttccccttta
     3541 tataagtcaa aattaactcc acgaatcgcc tttacttcac cggcatatgt gtggaatgaa
     3601 atatttaaat ctttaacttc taatagcttt tccatttttc ctcacctctc ttttaatcgc
     3661 gcattttagg atcgaaggca tcacgcaagc catctgcaat taagttaaat gcaatcataa
     3721 tgatacaaag tacaatacat ggatacagaa tcatatacgg taatacttgt aatgttttat
     3781 atccatcatt taccaagaca ccaagagacg ctgctggcgc tggaagacca agcccaataa
     3841 agcttaagaa ggcttcaaag aaaatcgcac taggaatact aaacatgatg ttaatgataa
     3901 taatcccaga aatatttggt attaaatgtt ttataagaat tttaggagta gattccccta
     3961 aagtcatgga agccataaca aattcttggt ttttaagttt taaaacttgt cccctgacta
     4021 cccgggccat cgttatccaa ctcgtcattg cgattgctat gataatagat acaatacctg
     4081 gttcgagtat taacatcatt aaaataacca caactaagtt tggaattgca ccaataactt
     4141 ctaaaacacg ttgcatgaaa ttatctacac ggcctccaac ataaccagaa atcaaaccgt
     4201 aagcaacccc aattataagg tcacaaagcg ctgctacaac agcaataata agagatacac
     4261 gtgtaccagc ccaaatacga gcaaattggt cacgtccaag cgtatcacta cctaaccagt
     4321 agtaagtacc ctctttaata ttattttgtt tataaatatc aacatcttct ccaccaatag
     4381 attgatgacc attccagaaa ggcatatttt caaagccttg aacttttgga ggaagactcg
     4441 cattttcagt gatttgtcgg ttaatatcat gttttggtcc tagattttgt gataaataag
     4501 gcccaacaat tgccatgata ataacaagtg ctaatacaat tagagaaact aaagccgctt
     4561 tatttttacg aatacgaagc caagaatctt gcaagaaagt taaacttgga cgattaattt
     4621 tctctgcttc tgcatccaga atgtgtgctg gctgaaatct ttcttttgca attttatgtt
     4681 ctgccattat tttctacctc cagacacacg gattcgagga tcaatcaatc cgtaaagaat
     4741 atccactacc aagataacaa ataccaacat gacagcaaat aaaattgtag ttcccataat
     4801 aactggatag tcatttgttt gaatagaaga aacgaattgg ctaccgatac caggaatact
     4861 ataaatattt tcaataacaa gggaaccagt catcagtgca actgataatg gtcctaaaac
     4921 tgtaattaaa ggaataagtg cattacgaat cgcatgttta actgctactt ccgttctact
     4981 attccctttc gctttggcaa gtagaacata atcagatgca aatacatcaa ttaactctgt
     5041 tctcatgaaa cgagctgctg ttgcaagcgg gaacatcgca agtgcgaatg ctggcagaat
     5101 agtatctgca aacgtacccc aacctgctac tgggaaaatt tgaagttttg ctccaagcca
     5161 gtattgtaaa acagtcgcaa atacgaaaga tggaactgac ttacctaata ttgctataaa
     5221 tgtactcgta taatccggcc acctattctg atacatggcc gctattaccc ctagtaaaat
     5281 accaaaaata acaccaaaag ccattgcctc gagtgctaat tggacagatg gaccaatcag
     5341 tgcacttaaa atctcagaca ctggtctatt atcaagttgg aaggaaacac ctaagtcacc
     5401 ttttaccaaa cctgtcatat aatttaagta ttggactgga attgaatcat ttagtccata
     5461 tttttcattc atcatgtgaa tttgttcgtc agatagtttc tcctgattac ggtaaggcgt
     5521 accaggtaag aatttcataa gaacaaacgt aaccgaagca atgatgaata acgttataag
     5581 catatataat actcttttta acgtatattt aaccatctat ctctacacct cccagtttta
     5641 attaatatat aaaaaaagtt attcctaacc aaattcgcaa gtttagtgag cctttttcta
     5701 catttctaaa cttttattgc attagtgcaa attagttagg aaaaaaactt catttttcga
     5761 atgttaggtt tctagaagac tagaaaagga tactttaatt tttaattata acacatgaaa
     5821 atcatcagca aaaggagaga gcatatcgaa atatactctc tctttccgtc aagcatttct
     5881 taaagactaa tattttattt agtcaagtat gtttctttgt aagtgtaatc tggaccaaat
     5941 ggattttttt gcaagttttt aatgtagtct ttttgtaggt atgcagtaga acgttgataa
     6001 agtggttgaa tagctacatc atccgtaaga agaatttttt ctgctttaac catttcatcc
     6061 caacgttttt gatcgtcagc tgcataagtt acagaagcat catttaaaat cttgtcgtag
     6121 tctttgttag aataactcat tctgttttgt gcaccatcag ttacgaatag atctaagaaa
     6181 gtggatggat cttgatagtc aggaccccag ccgctcatag agaaatcgta atcttggttt
     6241 tggtcatttt gtaaacgaac tttaaatggt acgtttttaa gtttaactgt aagaccgtct
     6301 aagttctttt gtagttggtc ttgaatgaat tcagaagatt ttctcgcatt ttcagtgtca
     6361 tcactagtga attcaactgt aatttcgtta actcctaatt ctttcaaacc agctttccaa
     6421 gctttttgag cttcttttac atcatattct aaatgtttgc cagattcttt tgtataatct
     6481 tctttgttac ctgggtcaaa agtgaaacct tctggtacaa ggttgtttgc aggtttagat
     6541 ccgtttttaa gaactgtatc agtatacgat tgtttgtcaa tcgcaagagc tatagcttta
     6601 cggatgtttt tgttagcaaa tactgtatct ttgccagcac gtttttggtt aaatttaatg
     6661 tagaaagtag aagaatcatt cactgttaca tagtctttat tgtttttgtt ttgagcagca
     6721 tagtctgcac tcaatacagt acggtcaact ttgtcagtgt tgtataagtt aagtccagta
     6781 ccggagtctt gaacaacttg tacgttgatt tgtttcaact taactttatc tttatcccaa
     6841 tatttatcat tttttacgta agtccatttt ttgtttgttc cagtccagtc tttcaactcg
     6901 aaaggtccat tgaataacat gttatcacta ttttgtgcat atttttcgcc tttttccgta
     6961 acgaattttt cgttaagtgg gaagaaagtc gggaatgcga atagtgagtt aatgtaagca
     7021 gttggtttag atagagtaac ttctaaagta taatcatcta ctgctttaat tcctaattct
     7081 tcaggttttt tcttgccagc tacgatatct ccaccgtttt tgattgcatc aaataggtaa
     7141 gaatatgttg cagcagtgtt agggtcaact gcacgacgcc atgagtaaac atagtcattt
     7201 gcagttacag ggtctccgtt tgaccatttt gcatcttcac gaagtttgat tgtataaact
     7261 gttttgtcat cgctaacttt tggctcttca gcagcaccgg caatggcagg aataccatct
     7321 ttgtcaagcg catatagacc ttcgtttgtt tggtttacaa cgttcaaacc aacttggtca
     7381 tccgcttttg tgctgtctgc agaaggaatt agtgcgcttt ctgtcaagtt aagtacttgc
     7441 tctcctgaag cttttcctga atctgagcct tttttgtcgg atttggaatc tgatccgcct
     7501 ccgcatgcta ccaagactaa gcttagtaat agtgttaatc caagtgtaag aaataattta
     7561 gattttttca ctaagtagac ctcccttttt tatttttctg aaaaattgtt tcgataccta
     7621 ttatactcta agaattctgg ctttgtaaat tatttttaca agataaatga aaacaaggat
     7681 gaaagataca agttattaaa atattaaggc aaaattgaaa ttgcgtgaaa actctgaaca
     7741 gaaagtgtta cgcaatcctc tattttgcaa taaatcgaat taattatgta tactttgcta
     7801 aaccttttga ttaagttttc agaaaacata accatttaaa ttgataaatt tacgatgaac
     7861 tttg
//
LOCUS       DASDYO010000130         7844 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.130, whole genome shotgun sequence.
ACCESSION   DASDYO010000130 DASDYO010000000
VERSION     DASDYO010000130.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7844)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7844)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7844
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.130"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            44..889
                     /locus_tag="U0290_002548"
     CDS             44..889
                     /locus_tag="U0290_002548"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2302581.1"
                     /translation="MTYLVTGATGGLGGYALNYLKELVPMSDIYALVRSEEKGADLKA
                     AGFNIRVGDYSDAESMKQAFVGIDRVLFVSGAPGNRQVEHENVVNAAKAAGVSYIAYT
                     SFAGADKSTSALAEDHFFTEKVIEKSGIAHTFLRNNWYFENEMPMIGGALSAGKFVYA
                     AENGKVGWALKREYAEVAAKAVAGADFPEILELSGPLMTYEELTKALKEATGKDFDVI
                     SSDDKGFVENLVSAGLPQPVAEMFLSFQHDIKNDQLDVTSDDFEKALGKPLTNRVDAL
                     RELLK"
     gene            1045..1662
                     /locus_tag="U0290_002549"
     CDS             1045..1662
                     /locus_tag="U0290_002549"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463967.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nuclear targeted protein LntA"
                     /protein_id="HEM2302582.1"
                     /translation="MKKLVAWFNGLSKMWKVVVIIGAVFVVIIALTTGENEGEQTKTK
                     TNSDKIVKTTSKPKLSTKDLALIKADLAEFEGRELSSEKILKDTIKEESWSDLDFAND
                     NINQMIGTMKRYQQEILNIDAVKRSSEASADTEAFKKVFKEWSDFKIERIQVTIDLLN
                     GKKDSEAAFKKSYPNQIIFKKVRTNKLQTALNNLKVGYELLDSQK"
     gene            complement(1695..2963)
                     /locus_tag="U0290_002550"
     CDS             complement(1695..2963)
                     /locus_tag="U0290_002550"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463968.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="module of peptide synthetase"
                     /protein_id="HEM2302583.1"
                     /translation="MVKITSYPAEPSDVKHYISGEKMKNDHHLHTVLTFDNHLNIDVL
                     KKAVMQSTKKLPLLLCHFKETKKGAFWQESVFSAEDLVFLVETQAPETEVDRALVTKL
                     STENGPQICFTVVRADTSDQLVVIMNHMLADGAGFKEYLYLLSELYSNLLENPDYAAN
                     LSLGSRSLKQIFDQLSRKDIKSIFTEKTKQKAVHNPTFPLKGDPKNPKVIWTKLPKED
                     FSEIIHFAKEHEATVNDVLFAAMARTVQQTTGQQEMSIDCPVDLRKYLPSKTSSGITN
                     LTANITCQISADDDLTSFESTLQAVKNSLNPQKNSFAPLRIYYLLELIFKKKNYSVAK
                     KASEKMYSIPKTSFTNIGIIDEEKLVFEGSTLTDCFICGSLKYAPFFQVAATTFRGEL
                     TLSTNLHGTTQDHAWQKDFLEQMISEFPSK"
     gene            3101..3603
                     /locus_tag="U0290_002551"
                     /pseudo
     CDS             3101..3603
                     /locus_tag="U0290_002551"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463969.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2004 domain-containing protein"
     gene            complement(3645..5681)
                     /locus_tag="U0290_002552"
     CDS             complement(3645..5681)
                     /locus_tag="U0290_002552"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463970.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="penicillin-binding transpeptidase
                     domain-containing protein"
                     /protein_id="HEM2302584.1"
                     /translation="MASYGGKKRNNKKAIIIGSIAAVVVLAGIAIYFFIQNQHKDEKN
                     ALAAAETFTSNIAKEKYDKLGSSVSSESLKKVEFTKKEMEDKYQAVYDGIGAKDIKVK
                     NLKSVYDDKENKFNLTYELEMRTSLGKLATQKYKTTISKQDDDWKIDWKPALIFPGMV
                     KTDKVRITEDEAERGQIVDRNGNPLATTGQFAEAGVVPSKLGEGDEKVKNIADISKKL
                     EVSTDYINKQLDQKWVQADSFVPLVTLNKDNLPEATGLTYAQKEMRTYPLNEATSHLI
                     GYVGEVSAEDIEKNPKLSVGDVIGKSGLERYYDKQLRGKNGGAIKIINDQTKQEDTLQ
                     KIDKKDGEEIKLTIDAAVQKKAFDSLGSETGAVTMINPTNGELLALVSTPSYDANQMV
                     LGITSEDYAKYNDDKRLPFLARYANRYAPGSTFKTITATIGLDTGITKPDKVREISGL
                     QWQKDASWGKYFVTRVHDVPKVNMTDALVHSDNIYFAQEGLEIGKDKLTAGLKKFDFD
                     KEYNLPFTMKPAQISNDGLNSEILLADTSYGQGELLMSPIQQAIAYSAIASDGKMPYP
                     KLDTKEKAGKETQATEAASANQVKAALVKTVSDPAGTAHALQIQGHSIAAKTGTAELK
                     EKQGEDGLENGFVYAFDADNPNYLMVGMIENVKGRGGSGLVIDKLKPVIESMYK"
     gene            5853..6167
                     /locus_tag="U0290_002553"
     CDS             5853..6167
                     /locus_tag="U0290_002553"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463971.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302585.1"
                     /translation="MEEMEQPEKKVIIRGKGIHNKWKWSTIIVSILSVIIISVLSYQL
                     YSVSQNTPENNTNGTMQGPGGGEMPSGTPPSGEPGQAPNSSDDSSDSGTSDSTTSSDG
                     TL"
     gene            6304..7233
                     /locus_tag="U0290_002554"
     CDS             6304..7233
                     /locus_tag="U0290_002554"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM2302586.1"
                     /translation="MARHAQKRKARKGRIFVTILVALLILVGVVAVIGYFQYQSSLKE
                     AQNESKLKDYKFNGAKAVGDEINVLLIGSDSRGEDQGRSDSLMIAHYNTKTNTPKLVS
                     IMRDTYVDIPGHGKNKINAAYSYGGPELVRQTIKENFGVDVQYYVVANFEGFPKIVDT
                     LAPEGIKINAEKDMSKNIDANIKKGEQVMDGKTLLQYARFRKDAEGDFGRIRRQQQVL
                     EALKEQAIDVGDVAKIPDVIGKLQGYSSTNIPTGTLMSIGADFLLGKTETMEKFAIPV
                     EGKWHNERIDGAGAVLRLDDMAANAKALQDFLK"
     gene            complement(7281..7829)
                     /locus_tag="U0290_002555"
     CDS             complement(7281..7829)
                     /locus_tag="U0290_002555"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4240 domain-containing protein"
                     /protein_id="HEM2302587.1"
                     /translation="MKKVSSLLTQDQFWGIIDNSDKGSKLEELLEKLSEDELFGYDYW
                     WNYFHKKSYNQSLWAVAYVVLGGCSDDGFDYFRYWLITRGKAVFTSAVENADTLCGEF
                     DLLTEDEYPENEEVAYLVMDIFENKLGKDFDDAENEAESRIEFEEVSMPPIDFEWDED
                     DEDSIKKVCPNTFAKWWNNDKF"
BASE COUNT         2415 a         1432 c         1541 g         2456 t
ORIGIN      
        1 atgtacagct ttaatattaa aaaaatttga aggagtggtt taaatgactt atttagtaac
       61 aggtgcaaca ggtggacttg gaggctacgc attaaattat ttgaaagagc tcgttccaat
      121 gtccgatatt tatgctttag ttcgtagcga agaaaaaggt gcagacttga aagcagcagg
      181 atttaacatc cgagttggtg attatagtga tgcagaatca atgaagcaag cattcgtagg
      241 aatcgaccgt gtattatttg tatcgggcgc tcctggtaat cgccaagtag aacacgaaaa
      301 cgtggtaaat gcggcaaaag cagcaggtgt ttcttacatt gcttacacaa gttttgcagg
      361 cgcagataaa tccacaagcg ctttagcaga agatcatttc tttaccgaaa aagtaatcga
      421 aaaatccgga atcgcgcaca ctttcttgcg taacaactgg tacttcgaaa atgaaatgcc
      481 aatgattggt ggcgcattaa gtgctggaaa atttgtatac gctgctgaaa atggaaaagt
      541 tggctgggca ttaaaacgcg aatacgcaga agtagccgca aaagctgttg cgggcgctga
      601 cttcccagaa atccttgaat tatctggccc actcatgaca tacgaagaac ttacaaaagc
      661 attaaaagaa gcaactggaa aagatttcga cgttatttct tcagatgata aaggatttgt
      721 agaaaattta gtttctgccg gtttaccaca acctgtcgca gaaatgttct tatccttcca
      781 acacgacatt aagaacgacc aattagatgt tacttctgat gattttgaaa aagcattagg
      841 aaaaccatta acgaatcgcg tagatgcact tcgggaattg ttgaaataaa aagggacagc
      901 ctaccttgat ttgaggtagg ctgttttttt actgcgcatt ttattatctt ttcagtagta
      961 tttatacgac cttttaaaca tttgataaga atgaggctat aattttatat gctctttatt
     1021 tattaaatga aagaaggaaa acgagtgaag aagttagttg cttggtttaa cggattatca
     1081 aaaatgtgga aagtggtagt aataataggc gcagtttttg tagttataat agccttaaca
     1141 acaggagaga atgaaggtga acaaacgaag acaaaaacta acagcgataa aattgtaaaa
     1201 acgacgagca agcccaagct ttcaaccaaa gatttagcct tgattaaagc tgatttagca
     1261 gaatttgaag gtcgggaact ttcttcagaa aaaattttga aagatacaat taaagaagaa
     1321 agttggtcgg atttggattt tgcgaatgat aatattaacc aaatgattgg cacgatgaaa
     1381 cgatatcagc aagaaatttt aaatatagat gcggttaaaa gaagttcaga agcctcggcg
     1441 gatacggagg catttaaaaa ggttttcaaa gaatggagtg atttcaaaat agagcggata
     1501 caagtaacta tcgatttact aaatggtaaa aaagatagtg aagctgcatt taaaaaatca
     1561 tatccaaatc aaattatctt taaaaaagtg cgcacgaata aattacaaac agccttaaat
     1621 aacttgaaag taggctacga attattggat agtcagaaat aagaaaaagc catcctgctg
     1681 aggatagctt tttcttattt agaaggaaat tccgaaatca tctgctccaa aaagtctttc
     1741 tgccaagcat gatcttgcgt agtaccatgc aaattagtac tcagtgtcag ctcgccgcgg
     1801 aaagttgtag cagcgacttg gaaaaacggc gcatacttta aagaaccaca aataaaacaa
     1861 tctgttaaag tgctaccttc aaaaacgagt ttttcctcat cgataatacc tatattcgta
     1921 aaacttgttt tcggaataga atacattttt tcagaagctt tttttgcaac agagtagttc
     1981 tttttcttga aaatcagttc caataaataa taaattcgta gaggtgcaaa gctgtttttt
     2041 tgtggattga gtgaattttt gacggcttgg agtgtacttt caaatgacgt taggtcatcg
     2101 tctgcgctga tttggcatgt aatattggcg gtgagattgg taattccgct actggtctta
     2161 ctcggcaaat acttacggag atccaccggg caatcaattg acatttcttg ttgccctgtt
     2221 gtttgctgaa cagtgcgcgc cattgcggcg aacagaacat cattcacagt tgcctcgtgc
     2281 tcttttgcaa agtggatgat ttccgaaaaa tcctcttttg gtagcttagt ccaaataact
     2341 ttcggatttt tcgggtcacc tttaagaggg aaagttgggt tatggacagc tttttgcttc
     2401 gttttttccg taaaaatgga ctttatatct ttacgcgaaa gttgatcaaa aatttgcttt
     2461 aaactccggg aacctaagct caaattcgcc gcataatccg gattttcaag cagattagaa
     2521 taaagctcac tcaataaata aagatattcc ttaaatccag cgccatctgc taacatatga
     2581 ttcataataa ccacaagctg atcagaagta tcagcccgaa caacagtaaa gcaaatttgc
     2641 ggcccatttt ctgtggaaag cttcgttaca agtgctcggt ccacttcggt ttctggcgct
     2701 tgcgtttcca ctaagaaaac caaatcctcc gcagaaaaaa cactttcttg ccaaaaagca
     2761 ccttttttcg tttctttaaa atgacaaagt aatagcggaa gttttttagt agactgcatc
     2821 actgcttttt ttagaacgtc tatatttaaa tgattatcaa acgtaagtac cgtatgcaaa
     2881 tggtggtcat ttttcatttt ttctccagaa atataatgtt taacatcaga aggttcagcg
     2941 ggataactcg tgatttttac catgggactt ccttctttct tcggtttaaa tagttgttaa
     3001 tagtttccct gaaagcagtg ctgcgaaaca agttgcggat caaagtgagt ttaagttata
     3061 ctgagcgtat gcaagctact atttctagga ggcaccgaac atgacaaaca gaacattaac
     3121 aaccaagtta ctaggaacac taagctatac gcaagaaaat ggaacgatga tggacgccgt
     3181 aattcctttg gatggcaaag aagtaaaggt tgattatagt atttttgaaa agcttacttc
     3241 agaagattat tttaaagata tcgttacttt aacggatcaa attccggaac tacacctaga
     3301 agcgaaaaaa ctattttaga gcaatttgat ggaaatgata cgcttactat ttattttaat
     3361 tttcatacag atgaattgcc cgaagcggtt ttagaagtta ccgaatgtga tgcgctagaa
     3421 aatataacaa aggaaatctt aatcgataaa ctagttttgt caggcgtttg gttttcggaa
     3481 aatgccaata atgagttgga tttaacattc gatttcaaac tattaccaga agttagcgat
     3541 gaacttttag ttgttcgttt taatacaaaa ggagaaatta ctgaattaac ccatgaaagt
     3601 taacaaaaaa gagccattct gttcgcgaac agaatggctc ttttttattt atacatactt
     3661 tcaataactg gttttagctt atcaattaca agtccgctac caccgcgacc tttgacgttt
     3721 tcaatcattc ctaccatgag gtaattggga ttgtcggcat cgaaggcgta aacaaaacca
     3781 ttttcaaggc catcttcgcc ttgtttttct tttagttcgg ctgtaccggt tttggctgcg
     3841 atactatgac cttggatttg tagggcgtgt gctgtaccag ctggatcaga aacagttttg
     3901 actaaagctg ctttgacttg gttggcagaa gcggcttcgg ttgcttgtgt ttccttgcca
     3961 gctttttctt ttgtatctag ttttggataa ggcatttttc cgtcgcttgc aatggccgag
     4021 tatgcaatcg cttgttgaat tggcgacatc agtaattcac cttgtccgta agatgtgtca
     4081 gctagtaata tttccgagtt cagcccatca ttcgaaattt gtgctggttt cattgtgaaa
     4141 ggtaagttat attccttatc aaaatcgaat tttttcaagc cagcagttag tttatctttg
     4201 ccgatttcta gaccttcttg agcgaagtaa atgttatcag agtgcacaag cgcatccgtc
     4261 atatttactt ttggaacatc atggacacga gtgacaaaat acttgcccca tgaagcatct
     4321 ttttgccact gtaagccaga aatttcacgg actttatcag gttttgtaat accagtgtcc
     4381 agcccaattg tggctgtaat tgttttaaag gtagagcctg gtgcgtaacg atttgcgtat
     4441 cttgctagga aaggtaggcg tttgtcgtca ttatattttg cgtaatcttc ggaagtgatc
     4501 ccgagcacca tttggttggc atcataagaa ggggtgctca ctaacgctaa tagttcgcca
     4561 tttgtcggat taatcatggt cacagcacca gtttcggaac cgaggctatc aaaagctttc
     4621 ttctgaacgg ctgcatcaat cgttagttta atttcttcgc catctttttt atcgattttt
     4681 tgtaaagtat cttcttgctt ggtttggtca ttgatgattt taattgcgcc accattttta
     4741 ccgcgcagtt gtttgtcata gtaacgttct aagccacttt tcccaatgac atcgccaacg
     4801 ctgagttttg gatttttttc aatgtcttcg gcgctaactt caccgacata accaatcaaa
     4861 tgcgaggttg cttcatttaa tgggtacgtc cgcatttctt tttgagcata cgtaagtcca
     4921 gtagcctcag gtagattatc tttattcaat gtaactaaag gaacgaagct atctgcttgg
     4981 acccattttt gatcgagctg tttgttgatg taatcagtgg agacttctag ttttttgcta
     5041 atatccgcaa tgtttttcac tttctcgtcg ccttcaccaa gcttcgaagg cactacacca
     5101 gcttcggcaa attgaccagt agtcgcgagt ggattaccat ttctgtccac tatttgacca
     5161 cgctctgctt cgtcttccgt gatgcgcacc ttatctgttt tcaccattcc ggggaaaatg
     5221 agagctggtt tccagtcgat tttccagtca tcatcttgct tggaaatagt cgttttgtat
     5281 ttttgtgtag cgagtttccc gaggctagtc cgcatttcta gttcgtatgt taagttgaat
     5341 ttgttttctt tgtcatcata gacagatttt agatttttta ctttaatatc ttttgcgcca
     5401 atcccgtcgt aaacagcttg atacttatct tccatttctt tctttgtaaa ttcgactttt
     5461 ttcagggatt cacttgagac gctacttccc aacttgtcgt acttttcttt agcgatattt
     5521 gatgtaaaag tttctgcggc tgctaaagca tttttttcat ctttgtgttg attttgaatg
     5581 aaaaagtaaa tggcaatgcc tgcgaggacg acaacagcgg caatgcttcc aatgataatt
     5641 gcttttttgt tattcctctt tttcccacca taactagcca taatacaccc cttaatttca
     5701 tgttatattc aattaattat accaaacact tctaaaaaag ttgaaaaaat taaagaaaac
     5761 tttagatttg cccgacatat ttttttctaa ttcatgtcat aatttgttct tatttgcttg
     5821 gtaaagtagt ggtaacgaaa ggatgatgtt ggatggaaga gatggaacaa ccagaaaaga
     5881 aggtcattat tcgtgggaaa ggcatccaca ataaatggaa gtggagcacg attattgtca
     5941 gtattctttc tgtcataatt attagtgttt taagttatca gctgtattca gttagtcaaa
     6001 ataccccgga aaataatact aatggaacca tgcaaggtcc tggtggaggg gagatgccga
     6061 gtggaacgcc gccgtccggt gaacctggcc aagcgccaaa tagttcagat gatagttctg
     6121 actctggaac aagtgatagt actacaagca gcgacggaac cctttaatat ttgcgagccc
     6181 tctagaaatc atcattttag ggggcttttt ccaatcttta aaaaatctta tggaattatc
     6241 gctcctattt tttgtcattt tattgtaata tggaagtaag ttacaataaa agaggtgtga
     6301 aatatggcaa gacatgcaca aaaaagaaaa gcgcgcaaag gtagaatttt tgttacgatt
     6361 cttgtagccc tattaatttt agttggtgta gttgcagtta taggttattt ccaatatcaa
     6421 tctagcttaa aagaagcgca aaatgaaagt aaattaaaag actacaaatt caatggtgcc
     6481 aaggcagttg gcgatgaaat caatgtacta cttatcggta gtgactctcg cggtgaagac
     6541 caaggccgtt cagacagctt gatgattgct cattataata cgaaaacaaa tacgccaaaa
     6601 ctggtatcga tcatgcgtga tacatacgta gatattccag gacacggcaa aaacaaaatc
     6661 aatgcagcat attcatacgg cggaccagaa cttgtacgcc aaacgattaa agaaaatttt
     6721 ggagtagacg tacaatatta tgtagtagcc aattttgaag gtttccctaa gattgttgat
     6781 acacttgcac cagaaggaat caaaatcaac gcagagaaag atatgtcgaa aaatattgac
     6841 gcaaacatta aaaaaggcga acaagtaatg gatggtaaaa cattgttaca atatgctcgc
     6901 ttccgtaaag atgcagaagg agacttcggt cgaattcgtc gtcaacaaca agtattagaa
     6961 gctttgaaag aacaggcgat tgatgttggt gacgtggcaa aaatccctga tgttatcgga
     7021 aaactacaag gttattcttc cactaatatc ccaacaggaa cattaatgtc cattggcgca
     7081 gatttcctac taggaaaaac agaaacaatg gaaaaattcg cgattcctgt tgaagggaaa
     7141 tggcacaatg agcgaattga tggagcggga gcagtgcttc gtttagatga tatggctgct
     7201 aacgcaaaag ctttacaaga ttttttgaaa taacaaaaaa acacggaagt cctcattaat
     7261 aggatttccg tgtttttata ttagaatttg tcgttattcc accattttgc aaaagtgttt
     7321 gggcatactt ttttgataga atcttcgtcg tcttcatccc actcaaaatc tattggaggc
     7381 atagatactt cttcaaactc aattctactc tctgcttcat tttcagcatc gtcaaagtct
     7441 ttccctagtt tgttctcgaa aatatccatc actaagtaag ctacctcttc attttcagga
     7501 tattcatcct ctgttaataa atcaaattca ccgcaaagcg tatcggcatt ttccacagca
     7561 gatgtgaata cagccttacc tcttgttatt aaccaataac ggaaatagtc aaatccatca
     7621 tcactacagc cacctaatac tacgtaagca acagcccaga gcgattggtt ataagatttt
     7681 ttatgaaagt agttccacca ataatcataa ccaaaaagtt catcctcact caacttttct
     7741 agtagttctt ctaatttgct gcctttgtca gagttatcaa taattcccca aaactgatct
     7801 tgggttaata aagatgatac ttttttcatt tgattttcct ccag
//
LOCUS       DASDYO010000131         7733 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.131, whole genome shotgun sequence.
ACCESSION   DASDYO010000131 DASDYO010000000
VERSION     DASDYO010000131.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7733)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7733)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7733
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.131"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..261)
                     /locus_tag="U0290_002556"
     CDS             complement(<1..261)
                     /locus_tag="U0290_002556"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302588.1"
                     /translation="MKNTVHDSEILSYHADFENSQLIMFVKDEENRKYKVIFEGLLTF
                     CFEHQMSNSIILDIVKGEVSSFISEKSILLSEGKNYFWPLDYE"
     gene            complement(274..1575)
                     /locus_tag="U0290_002557"
     CDS             complement(274..1575)
                     /locus_tag="U0290_002557"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734779.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LXG domain-containing protein"
                     /protein_id="HEM2302589.1"
                     /translation="MSRIDIGEIQDFAFQLRAANQTGRKIIQGVKTTVTNYVEDGSLK
                     GKAVEASKNYFQMTYIPLCDTIIEAMNESEERLKRYIQDFHDQVDLSPNAKIDADGLY
                     ELGQMIDRIESKKEALYQRMNSSTEGQMQTYRSQLATAYKQENILEKYLAFEQSHGAF
                     FDHLTDLVQGIQQTVRELQSNIQFDSQTGSYDLSKLNFATVNRMRKTLGKASATDTTV
                     YNFASYSKVKQGVMWILSKDGKVDIKATEAYNTASFNGELPKESKQATEEGELLKATL
                     ESLKQNKDPITGQEISKAQSFGILTSLVFGYTTKGYQGKKLTISKNTLIKLRQADKTV
                     IERIKKTSRIDYEEIVKKGSKMPKHIIVENKQSLPGKAMPSSSADLLNPDGSVKQRRY
                     YDEKGRAKEDIDFNHSDDGTHEFPHRHEWDWDRKPPRKPSK"
     gene            complement(1572..1940)
                     /locus_tag="U0290_002558"
     CDS             complement(1572..1940)
                     /locus_tag="U0290_002558"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA double-strand break repair Rad50 ATPase"
                     /protein_id="HEM2302590.1"
                     /translation="MDSNNEKLKQQLQTLQKQQKDAELSLYMLKHEQNERIWLEEDFE
                     RICYEERESLELMREVWQGDQARNFGYYLEDLQADEKNKWCQTFQAEEEKRQEKINTY
                     QKNIYQLESKQQDIQKELFQ"
     gene            complement(2068..2433)
                     /gene="isdG"
                     /locus_tag="U0290_002559"
     CDS             complement(2068..2433)
                     /gene="isdG"
                     /locus_tag="U0290_002559"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme oxygenase IsdG"
                     /protein_id="HEM2302591.1"
                     /translation="MIIVTNTIKVEKGAAEHVIRQFTGANGDGHPTKDIAEVEGFLGF
                     ELWHSKPEDKDYEEVVVTSKWESEEAQRNWVKSDSFKKAHGRTKDTREQREDRKGIVG
                     NAIARFEVVHVQNPVIVEK"
     gene            complement(2591..3070)
                     /locus_tag="U0290_002560"
     CDS             complement(2591..3070)
                     /locus_tag="U0290_002560"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM2302592.1"
                     /translation="MEVEIVERNAFTAVGKKRTFSVENDAQKEKISQFWQEANTNGDA
                     ERINELAEFATIDGILGVCKMNGDKMDYYIAIESELTPPADMEKLIIPASKWAIFKSV
                     GPLPSAIQKVWEYIYGEWFQTSNYAHGNAPELEVYTEGDTTAADYYSEVWIPVVEKE"
     gene            complement(3160..4263)
                     /gene="rlmN"
                     /locus_tag="U0290_002561"
     CDS             complement(3160..4263)
                     /gene="rlmN"
                     /locus_tag="U0290_002561"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (adenine(2503)-C(2))-methyltransferase
                     RlmN"
                     /protein_id="HEM2302593.1"
                     /translation="MEKSSIYGLTWTKLTEWLEAHGQKKFRATQVWDWLYRKRVKTFE
                     EMSNVPKETIELLTANFVMNTLEEQVVQESTDGTTKYLFKLSDGNLIETVMMKQEYGL
                     SVCVTTQVGCNIGCTFCASGLLKKSRDLTAGEIVEQIMNVQHYLDGRNLEERVSHVVV
                     MGIGEPFDNYDNVMDFLRVINHDKGLAIGARHITVSTSGLAPRIIDFANEDFQVNLAI
                     SLHAPNNELRTSIMRINKTYSIEKLMEAIHYYVNKTNRRITFEYIMLKGVNDHKKEAL
                     ELAALLGEHRHLAYVNLIPYNPVDEHIDYERSTKEDVLAFYDTLKKNGINCVIRREHG
                     TDIDAACGQLRSKQIKRVGVRERMKQKQAAAEE"
     gene            complement(4414..6114)
                     /locus_tag="U0290_002562"
     CDS             complement(4414..6114)
                     /locus_tag="U0290_002562"
                     /EC_number="4.2.1.53"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oleate hydratase"
                     /protein_id="HEM2302594.1"
                     /translation="MKNKKRTLVALTGAAIGTGIAAKKISEQKAAEKERAVDEAIKAR
                     YYGDKQVYFVGGGIASLAGAVYLIRDANFDGKNIHIIEGMHILGGSNDGAGSVEHGFV
                     CRGGRMLNEETYENFWDLFSSIPSLDMPNFSVTEEILNFDHLHPTHAQARLVDKDRNI
                     LDAHSMGFNNNDRMLMTKLLATPEEKLDNLTIRDWFDEHFFETNFWFMWQTTFAFQKW
                     SSLFEFRRYMNRMMLEFSRIDTLEGVTRTPLNQYESLILPLKTFLDKHHVDFTINQTV
                     EDIDFKDAPGITATALHLSDGSTIKLGPDDDVIMTNACMTDSATLGDMNTPAPKPEEK
                     PISGELWYKVAQKKPNLGNPEPFFAHEEETNWQSFTVTCHGDKLLKRIERFTGNIPGS
                     GALMTFKDSNWLMSTVVAAQPHFKAQDANTTIFWGYGLYPDRVGDFVKKPMKECTGEE
                     ILYELMCHLNWQDDFEEIKADIINVIPCYMPYIDAQFEPRAMSDRPAVVPEGSTNFAM
                     ISQFVEIPKDMVFTEEYSVRAARIAVYTLLDIDKKICPVTPHNRDPKVLAKATQTMFR
                     "
     gene            complement(6224..6784)
                     /locus_tag="U0290_002563"
     CDS             complement(6224..6784)
                     /locus_tag="U0290_002563"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2302595.1"
                     /translation="MAESLITKKAIAGGLMELCQHKRFEKISIADITNICGLNRQTFY
                     YHFTDKYDLLTWTYENDFFHCLADGITLENWDKHVLKMLESIKENADLYKNTVSADAS
                     ILSFCFSKLTNSLFMDLFEKIDTNGAVNEADRVFYAEFFSYGCSGVLIKWITRGFKEA
                     PEMIANQLFRLAKDTEFLANSMYREN"
     gene            complement(7036..7395)
                     /locus_tag="U0290_002564"
     CDS             complement(7036..7395)
                     /locus_tag="U0290_002564"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464007.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3139 domain-containing protein"
                     /protein_id="HEM2302596.1"
                     /translation="MKKYKKWWITIGIVLILCVIGYVYWFVIPKHTANKAVDNYLAEQ
                     KIKSNQIETRVIKKDWKMGGYLTKIVFKDDPNLKYEYSYDERYEFPHHIYVLVFKDGS
                     SQEDDQVKHPPLQEQND"
BASE COUNT         2044 a         1656 c         1308 g         2725 t
ORIGIN      
        1 ttcataatct agtggccaaa aatagttttt gccttcagaa agtaaaattg acttctcact
       61 tataaagctg ctaacctctc cttttactat gtctaaaatg atactattag acatttggtg
      121 ttcaaagcag aaagttaaaa gcccctcaaa tatgacttta tattttctgt tttcttcatc
      181 cttaacaaac atgattaatt gagaattctc aaaatctgca tgataagaca atatttcgct
      241 atcatgaact gtatttttca taattaacac tccttattta gatggctttc ttggcggttt
      301 tctatcccaa tcccactcat gtctatgtgg aaattcgtga gttccgtcgt ctgaatggtt
      361 aaaatctata tcttctttag ctctgccctt ttcatcataa tatcttcttt gttttacact
      421 tccatcagga tttaacaaat cagccgagga actgggcata gcttttcccg gaagactttg
      481 tttgttttcc acgatgatgt gtttaggcat tttactacct tttttaacaa tttcttcata
      541 gtcaattctg ctagttttct taatcctttc tataaccgtt ttatcagctt gtctcaattt
      601 tatcaatgta tttttcgata ttgtcagttt cttcccttga taccctttcg tcgtgtagcc
      661 aaaaacaagt gaggttaaaa tcccaaaact ttgagctttg cttatttctt gaccagttat
      721 cggatcttta ttttgcttca gtgattctag tgtggctttt aacaactcgc cttcttcagt
      781 ggcttgctta ctttcttttg gtagctcacc gttaaaactg gctgtattat aagcctccgt
      841 tgctttaata tccactttcc catcttttga aagaatccac ataacgcctt gttttacttt
      901 gctataactc gcaaaattat agactgtcgt atcagtggca ctcgcttttc ctagcgtttt
      961 tcgcattcgg ttcacagtgg caaaatttaa tttacttaaa tcatagctgc ccgtttgact
     1021 atcaaactgg atatttgatt gtaactctcg aacagtttgc tggatacctt gcactaaatc
     1081 cgtcaaatgg tcgaaaaaag ccccatgact ttgttcaaaa gccagatatt tctctaaaat
     1141 attttcttgc ttatatgcgg ttgctaactg ggaacgatag gtttgcattt ggccttctgt
     1201 actgctgttc attcgttggt acagtgcttc ttttttgctt tcaatgcggt caatcatttg
     1261 gccgagttca tataaaccat ctgcatcaat tttagcatta ggagaaaggt ctacttggtc
     1321 gtgaaagtct tggatatacc gcttcaacct ttcctcactc tcattcattg cctcgattat
     1381 cgtgtcgcag agtggaatgt atgtcatttg aaagtaattt ttggacgctt ccacggcctt
     1441 cccttttaaa ctaccatctt ctacgtagtt tgtcacggtg gttttgacgc cttggatgat
     1501 ttttcttcct gtttggttgg ctgcgcgtag ttggaatgca aaatcttgta tttctccgat
     1561 gtcgattcgg ctcactggaa caactccttt tgtatatctt gttgtttact ttccaattgg
     1621 tagatgtttt tttggtatgt atttattttt tcttggcgtt tttcttcctc agcttgaaag
     1681 gtttggcacc atttattttt ctcgtctgct tggaggtctt ctaaatagta gccgaaattg
     1741 cgagcttgat cgccttgcca gacttctctc atcaactcca aagactcgcg ttcttcgtaa
     1801 caaatccgct caaaatcttc ttctagccaa attcgctcat tttgttcatg tttgagcata
     1861 tataaggata attccgcatc tttttgttgt ttttggagag tttgtagttg ttgtttcaat
     1921 ttctcgttgt ttgaatccac ttaaatccat ccctgctttt ttattcttaa tataccgcat
     1981 aagatataaa aattcaataa ttatctgaaa attcgagcgc gcaaaaaaac aagccatcta
     2041 cctcgaaacg gcttgttcat tcacttctta tttttcaaca atcacagggt tttgcacgtg
     2101 aaccacttca aaacgagcga ttgcatttcc tacgatgcct ttgcggtctt ctctttgttc
     2161 tctagtgtct tttgttctgc cgtgtgcttt tttgaaggaa tcgcttttca cccaattgcg
     2221 ttgggcttct tcactttccc atttgcttgt tacgactact tcttcatagt ctttgtcttc
     2281 tggtttgctg tgccatagtt cgaagcctag gaaaccttct acttctgcga tatcttttgt
     2341 tggatgtccg tcgccatttg cgcctgtgaa ctgacggata acgtgctctg ctgcgccttt
     2401 ttctacctta atcgtattag ttacaataat cattcttaaa tcccccttgg ataattgtat
     2461 tgtatgtata ataggctggt tccttccatt atattgataa tgattctcaa tgtcaatttt
     2521 agggaatggg cttggagtgg gatttaaaaa gaacaaattt cacaatcaat gaaatttgtt
     2581 ctttagtttg ctattctttt tcaaccaccg gaatccaaac ctccgaataa taatcagcgg
     2641 cagttgtgtc accttctgtg tagacttcta gttctggagc gtttccgtgc gcgtagttgc
     2701 ttgtttggaa ccattcgccg taaatgtatt cccacacttt ttggattgcg cttggtagtg
     2761 ggccgactga tttgaagatg gcccatttac ttgctgggat gattagtttt tccatgtctg
     2821 ctggtggagt gagttcggat tcaatcgcga tataatagtc cattttgtcg ccgttcattt
     2881 tacaaacgcc taaaatacca tcaattgttg caaattcagc taactcgttg attcgttcgg
     2941 catcaccatt tgtgtttgct tcttgccaaa attggctgat tttttctttt tgcgcatcgt
     3001 tttcaaccga aaaagttcgt tttttcccca cagctgtaaa agcatttcgt tcgacaattt
     3061 ctacttccat gatttttgtc ctccttcaat tgctttcggt actttaagta taaacaaaaa
     3121 ctatccaatc tccaaatgga aaccagatag tttgaattat tattcttccg ctgctgcttg
     3181 tttttgtttc atccgttcgc gcacgccaac tcgtttgatt tgtttactac gaagttgccc
     3241 acacgcggca tcaatatccg tcccgtgttc gcggcgaata acacaattaa taccattttt
     3301 cttcaatgta tcatagaaag cgagtacgtc ttcttttgtg ctacgttcat aatcgatatg
     3361 ctcatccacc gggttgtaag gaatcaagtt aacataagct aaatggcgat gttctccgag
     3421 aagtgccgcc agttcgagcg cttctttttt gtggtcgttt acacctttta gcataatgta
     3481 ttcaaacgtg attcggcggt tagttttgtt aacgtaataa tggattgctt ccatcaattt
     3541 ctcaattgaa taggtcttgt taatacgcat aatactcgtc cgcagttcat tgttcggcgc
     3601 atggagggaa atcgctaagt taacttggaa atcctcattg gcaaaatcaa taatgcgcgg
     3661 tgcaagacca cttgtcgaaa cagtgatatg gcgcgcgccg attgcgaggc ctttgtcatg
     3721 attaatcaca cgcaagaaat ccatcacatt atcgtaatta tcaaacggtt ccccgattcc
     3781 cattacaacc acgtgactca cgcgttcttc caaattacgt ccatccaaat aatgctgcac
     3841 attcataatt tgttccacaa tttcgccagc ggttaagtcg cgactttttt tcaaaagccc
     3901 actcgcacaa aaagtacagc cgatattaca accaacttga gtcgttacac aaaccgacaa
     3961 gccatattct tgcttcatca tcacggtttc aattaagttc ccgtcactca gcttaaataa
     4021 atatttcgtt gtgccgtctg tcgattcttg taccacttgt tcttctaaag tgttcatcac
     4081 aaaattcgct gttaaaagtt caattgtttc ttttggaacg ttactcattt cttcaaaagt
     4141 tttgacacgt tttctataaa gccagtccca cacttgtgtt gcgcggaatt tcttttgacc
     4201 gtgtgcttct agccattctg ttaattttgt ccatgttaat ccataaatgg agcttttttc
     4261 cattgttcag cctcttttca ggtcttgttt tcgtctataa agattatagc tgttttatgg
     4321 ttcacaagca atgctatttc gtaaatatca gccgtttgtc ctgtctcgca caaaaaaagt
     4381 agctattctg tcacaaatag ctactttctc actttatcta aacatggttt gggttgcttt
     4441 cgctagcact tttggatcac gattatgtgg tgttactggg cagatttttt tgtcaatatc
     4501 aagtaacgta tacacggcga ttctagcagc acgaacggaa tattcttcgg tgaaaaccat
     4561 atcttttgga atttccacaa attggctaat catcgcaaag tttgtactac cttctggaac
     4621 aacggccgga cgatcactca ttgcccgtgg ttcaaattgc gcatcgatgt atggcatgta
     4681 gcacggaatt acattgataa tatccgcttt aatttcttca aaatcgtctt gccagttcaa
     4741 atgacacatt aattcatata aaatttcttc cccggtacat tctttcatcg gttttttcac
     4801 gaaatcaccc acgcggtctg gatataatcc gtaaccccag aaaatcgtag tgtttgcatc
     4861 ttgcgcttta aaatgaggtt gtgcggcaac aacagtactc attaaccaat tagagtcttt
     4921 gaaagtcatg agcgcaccac ttcctggaat gttccctgtg aagcgttcaa tgcgttttaa
     4981 taatttatca ccatgacaag tgacggtaaa actttgccag tttgtttctt cttcatgagc
     5041 gaagaatggc tctggattgc ctaaatttgg tttcttttga gcgactttgt accaaagctc
     5101 accagaaatt ggtttttctt caggttttgg tgccggtgta ttcatatcac caagagtcgc
     5161 gctatctgtc atacaagcat tcgtcataat cacatcatca tctgggccaa gtttgatagt
     5221 ggatccatcc gataaatgaa gtgctgtcgc tgtaattcca ggcgcatctt tgaaatcaat
     5281 atcttccacc gtttgattaa ttgtaaaatc aacatggtgt ttatctaaaa atgtttttaa
     5341 aggtaaaatc aagctttcgt attggtttag aggggttctt gttacacctt ccagcgtatc
     5401 aatccgacta aattctaaca tcatccgatt catataacgt ctaaattcaa acaagctgct
     5461 ccatttttgg aaagcaaaag tggtttgcca cataaaccaa aaattcgttt caaaaaagtg
     5521 ttcgtcaaac caatcacgta tcgttaaatt atccagtttt tcttccggag tagcgagcag
     5581 tttcgtcatc aacatccggt cattattatt aaatcccatc gaatgcgcat cgaggatatt
     5641 gcgatcttta tcaactaatc tcgcttgcgc atgggttgga tgtaaatggt caaaattcaa
     5701 aatctcttct gtaacactaa agttcggcat atcaagagac ggaatactac taaataaatc
     5761 ccagaaattt tcataagttt cttcattcaa catccgacca ccgcgacaaa caaagccatg
     5821 ttccacgctt ccggctccat cattacttcc gcctaaaata tgcatacctt caataatatg
     5881 aatatttttc ccatcaaaat tggcatcccg aattaaataa acagcgcccg ccaaactagc
     5941 aatcccgcca ccgacgaaat acacttgttt gtcaccataa tagcgcgcct taattgcttc
     6001 atccactgcc cgttcttttt cagcggcctt ctgttcagaa attttctttg cggcaatacc
     6061 tgttccaatt gcagccccag ttagagcgac tagcgtacgt tttttatttt tcatcactat
     6121 ctcctccaat ttcttgatac agatagtata ccgcttgtcg ttcgctttta atctgggcaa
     6181 aagaacgctt atgtctggtt tttagacaaa ttagccatat tgtctagttt tcgcggtaca
     6241 tgctgtttgc taaaaattcc gtatcctttg caagtcgaaa tagctggttc gcaatcattt
     6301 ccggtgcctc tttgaaaccg cgcgtaatcc atttaatcag tactcccgag cagccgtaag
     6361 aaaagaattc cgcataaaat actcggtctg cctcgttcac ggctccattc gtatcaattt
     6421 tctcaaataa atccataaac agcgaattcg ttaatttaga aaagcaaaaa gaaaggatac
     6481 tcgcatccgc cgaaaccgtg tttttatata aatcagcatt ttctttaatc gattccagca
     6541 ttttcagtac atgcttatcc caattttcaa gcgtaatccc atccgccaaa caatggaaaa
     6601 agtcattttc atacgtccaa gtaagcaaat cgtatttatc tgtaaaatga tagtaaaaag
     6661 tttgccgatt aagtccacaa atattcgtaa tatccgcaat actaatcttt tcaaaccgct
     6721 tgtgctgaca aagctccatc agcccaccag caatcgcttt tttagtaatg agtgattccg
     6781 ccatggcatc cgccccgttt cgtttgtttg ggttaattgt atctcaggtg gggttggaat
     6841 tgctagggaa agcatgggag atgttggtgc tttattatct ccttgaatga aaatgacaga
     6901 ttttagttga actaatccaa agttttttgt cttctcgact agctctcgtg cattaaggtg
     6961 tctcaagtta tttagtaaat tcactttggg accttagccg gcttgatcat tcgattggcg
     7021 tgatgctttt ttgttttaat cattttgctc ttgtagtggt ggatgcttca cttgatcgtc
     7081 ctcttgactc gagccatctt taaaaacaag gacataaata tgatgcggaa actcgtatct
     7141 ttcatcatag ctatattcat actttagatt tggatcatct ttaaaaacta tctttgtaag
     7201 ataaccaccc attttccaat ctttctttat cactctagtt tcaatttgat tagatttgat
     7261 tttttgttct gctaggtagt tatccactgc tttattcgcc gtatgtttag ggattacaaa
     7321 ccaataaaca tatccgataa cgcaaagaat taacactata ccaatcgtta tccaccattt
     7381 tttatacttt ttcatttagc tacacttcct aaggcatgag atttatttaa agtatttcac
     7441 ttgttgcctt tttgaaaaat agtttggtaa atcatacagg aaaactaatg aagaaaatac
     7501 atgtactaca ggcttacttc ctttaccaca atagttgttc ctactaaaac catagcatag
     7561 aaaatgaatg tataaccaaa aatgtaatga aatgtccgat tcttgtcatg aacgacctat
     7621 tttagacgaa aatcaataca ttaagaattg attcacttaa atttatgttc aaaataacac
     7681 aacttgtgtc catatacata attttataca ttaaaaaata aaataagcca ttt
//
LOCUS       DASDYO010000132         7520 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.132, whole genome shotgun sequence.
ACCESSION   DASDYO010000132 DASDYO010000000
VERSION     DASDYO010000132.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7520
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.132"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..1698)
                     /locus_tag="U0290_002565"
     CDS             complement(<1..1698)
                     /locus_tag="U0290_002565"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2302597.1"
                     /translation="MKKKFSIVIISVLLLGYLAPFDTLLVGADETTVTEDTTVKTAET
                     ETATEATESESGSDNEKAEEPKEAEASKETTEKEEKAKTKEPASNIKTEINTDKSQLK
                     QTNLKAVVPAGSTYNSLFPDDNLAKKLAVIITGNAAATGNESVDSAALLAISQLDLSG
                     ETGNDPTDISNIEGLQYLENLTSLNLSENNISDLAPIKDLVNLVSLNLSSNRTLVNLS
                     GVEGLVNLQELNVSANKALEDISQVAALPVLKEISAQGCNIKTLELDNPAGAILPELE
                     TFYLQENDLTDLTSLAKLPKLKNLYIKGNASLKSLATLKGATKLQLIDASNCTDLETL
                     GDISGLSELEMIQLSGCSKLKEITSLKDLPNLVNITADSCAIEDLGTLNNLPKLQTLI
                     LSDNKDLTNINAITDMPQLKTLALDGCGITSIGTLDNLPKLEKLDLKENQLTSISEIN
                     DLPRLSYLDVSVNYLTTIGELKKLPLLEWLNVSSNRLSDVSTLTNFPSLNYINVSNNV
                     IRTVGKMTELPSLKEFYAQNNNVSDISMIHDMPNLRKVDASNNLITNIGTFDNLPKLQ
                     "
     gene            complement(2089..5070)
                     /locus_tag="U0290_002566"
     CDS             complement(2089..5070)
                     /locus_tag="U0290_002566"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929359.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2302598.1"
                     /translation="MKSKTKQIIMIGVVLFQSLFAYPLITMAEENESKSVNTETTLEP
                     KVALEEKTPQKPTLTNNLKQEKTVLQAGETYETVFPDAALATVIAKAATGSEDITQEV
                     SQTDLNKITSLTATSKGIVDLTGIDLLSKLTSLSISGNQITDISALNGLVNLSNLNVS
                     NNKITSFNLNANSNLPMLSAVDIRSNNLKNINVQDQPKLWTFKCDTGSSSELTEVTLK
                     NLPTLIVAGNGSSAYQNDIVFSSTPGLSKVILENLPSISSSVRLDRCAIEELVINNLP
                     KVSMVNISNNKITTLEGLENLSAVNTLYVSENLVTEIESMHAFPKLQKLELGWNALTN
                     VVMDQVTAEKFPLLRTMNVRGNNLIKINIQDQPKLWTFECDTGSSSELTEVTLKNLPI
                     LIAVGNGSSAYQDDIVFSSTPGLSKVILENLPSTSSEVKLDHCAIEELVINNLPKVSV
                     VIISYNKITTLEGLENLSAVSKIDAYENLVTEIENLHAFPKLQTLTVDNNHISVLPTS
                     LKTENPVLTTLSAMNQTITLKQKVIVSDLVLDNEVKNFGQITTAKSISNKGTYQNNQI
                     KWLFEDIKSVNAVDYQFSEPVQEATIQGTFSGKVTQPIKASKVPVISADAEMNYPKNE
                     TVSEAAFFKDISASVTDDATLTSDFESVVDFAKAGTYEVTLNAVNEDGVKATSVTVLV
                     HIAKSPAPVITADKEITYTKNAEVSITEYLAAIHAKTNDGSPIESDFATAVNWGTAGD
                     YTVTLRSTNEDGVEAIPVEVTVHIAKSPAPVITADKEITYAKNAEVSITEFLAAIHAK
                     TSDGSPIESDFATAVIWSTAGDYTVTLKSTNEDGVEAIPVEVKVHIVEPLAPTISNVT
                     FDVDDVQTTESLEAGELISEPLSPTKEGYTFIGWYDSKTGGNKWDFTTDKMPAYNIIL
                     YAQFSKDTNKAEAAGGDKPSTPSSIKVSPTGQSESGNLENRSNIKLPATGDDNATVLL
                     VGFGLLMLGLFIRLTQKKRAK"
     gene            5639..7495
                     /locus_tag="U0290_002567"
     CDS             5639..7495
                     /locus_tag="U0290_002567"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2302599.1"
                     /translation="MKLSKFFTIIALSATVTSSLPIPMVKAESTTANETKIENQLPKT
                     DLKETPKEKTTNNNLKNQLVQAGTKTYNDYFPDDNLAKAVAEKMNKNVDESVTVEELA
                     KITKLDARSQGIEDSTGIEYLTGLEILYLEDNQLKSIDVSKNLNLKDLACSNNPLVNL
                     DVSKNLALEELTCENNELTQLDVSKNTALEYLYCPRNQLTKLDVSKNSALRYLACDVN
                     QLTSLDVSQNPALTNLGCTKNQLTDLDVSQNPNLSTLVCSDNQLTNLDVSQNQALAYL
                     TCDNNGLKNIDIDQNLALIELSCENNQLTNLDTTQNLALEILYCDDNQLTNLDVRKNV
                     NLLILSCNNNQLTNLAVGETILDVSCNNNQLKDISSLPDYLTAENGEYQAMDQTLVGP
                     IQTTQNNTLVYAVPTDLLDKDGNIVSIIKPENGGVYDAATRTITWENLPDSGEVSYTF
                     ESNDYGVFSGRVTVPYTGKETVSISSDDEISYKEGTTKTEEAFLTDIHASVTPATETI
                     TSNFADVVDLQTPGKYVVTLSVAESDITKDVIVYVTEEPSKDNPVAPVPPKDPDNKVA
                     DNDQNTEKPQVKVDEKTLPKTGDITSLSLSLAGIICLSFGILFFIKRKKKTV"
BASE COUNT         2313 a         1377 c         1252 g         2578 t
ORIGIN      
        1 ttgcaatttt ggtaaattat caaaggtacc tatatttgta attaagttat tactcgcatc
       61 cacttttctt aaattcggca tatcgtgaat catcgaaata tctgatacat tgttgttttg
      121 agcgtaaaat tccttcagtg aaggtaattc agtcatttta ccgactgtcc taatgacatt
      181 atttgataca ttaatataat ttaaactcgg gaaatttgtt agtgtactca catctgataa
      241 cctattcgaa ctaacattca accattctaa tagtggtaat ttttttaatt cccctattgt
      301 tgtaagataa tttacactta catctaaata gcttaatcga ggtaagtcgt ttatttcact
      361 tatactagtt agttgatttt ccttgagatc taatttttct aatttaggaa ggttatcaag
      421 cgttccaata gatgtaattc cgcagccatc caaggctaat gtttttaatt gtggcatatc
      481 ggtaattgca ttaatattgg ttaaatcttt attatctgag agaattaatg tctgtaattt
      541 cggtaaatta ttcagtgttc ctaaatcttc aatcgcacag ctatctgccg taatattcac
      601 caaattaggc aagtccttca agcttgtgat ttctttcagt ttactacaac cacttaattg
      661 aatcatttcg agttccgaaa gcccgctaat atctccaagc gtttctaaat cggtacagtt
      721 actcgcatca atcaattgaa gcttcgtcgc cccttttaat gtcgctaaac tttttaaaga
      781 agcattccct ttaatataga gattctttag ttttggaagt tttgctaatg aagttaagtc
      841 ggttaaatca ttttcttgca agtaaaatgt ttctagttct ggcaaaatag cgccagctgg
      901 attatctaat tccaatgttt taatattaca gccttgcgca ctaatttctt ttaacactgg
      961 taatgctgca acttgtgaaa tatcttctaa cgccttattt gcagagacat taagttcttg
     1021 caaattaact aaaccctcca cccctgaaag atttactaat gttcgattgg aagaaaggtt
     1081 aagtgaaacc aggttcacca aatctttaat tggggccaag tcagatatat tattctcact
     1141 taaattcagg ctcgttaaat tctctaaata ttgtaatcct tcaatattgg aaatatccgt
     1201 tgggtcattg cccgtttccc cactcaaatc aagttggctt attgctaaaa gagctgcact
     1261 atccactgat tcattacctg ttgcagccgc atttcctgtg ataatcacgg ctaatttttt
     1321 agcaagattg tcgtctggaa acaaagaatt atatgtgctt cctgctggta ctactgcttt
     1381 taaattagtt tgtttcaact gacttttgtc tgtattaatt tctgttttaa tattagaagc
     1441 cggttctttt gttttcgctt tttcctcttt ttctgtcgtt tctttgcttg cttctgcttc
     1501 ttttggctct tctgcctttt cattgtctga accagattcg ctttctgtag cttcagtagc
     1561 agtttctgtt tctgccgttt tcactgtcgt atcttcggtg acagtggttt catctgcacc
     1621 tactaataga gtatcaaaag gcgctaaata accaagtaac aatacgctga taataactat
     1681 actaaatttc tttttcaaga ctttccctct attctatctt ttaatttatt ttgaataaaa
     1741 ttgacactaa ttaattataa gatgttagaa atagttagat agttcgagtc agtactaaat
     1801 cgtccggaaa atgtgtctat ttttgggttt cacttattaa atcgcagagg aagttctatt
     1861 attagactat ccttcgtctt tgagggaata ataggcaaaa aaaactatca ccccttttca
     1921 taaagttaaa agttgttttg ggacatgtta ctcgtttttt ctgctatctt ttagtactcc
     1981 agtatcaaaa aaagaggaga cagctctctg tctcctctcc ttgtgagttg caactattta
     2041 tctcctagaa gcaaccaatt acactatttt ttaaatttct atgagctttt atttagcacg
     2101 ctttttttga gtaaggcgaa tgaaaagccc caacattagt aatccaaagc ccactaataa
     2161 aacagttgca ttatcatcgc ctgtagctgg taatttaata ttagatctat tttccaagtt
     2221 tccactctcg gactgacctg ttggacttac ttttatagaa gagggtgttg agggcttatc
     2281 tccaccggcc gcttctgctt tatttgtatc tttactaaac tgagcataaa gaataatatt
     2341 atatgctggc attttatctg ttgtaaaatc ccatttatta ccaccagttt tcgagtcata
     2401 ccaaccaata aaagtatagc cttcttttgt tgggctcaat ggttcagaaa ttagctctcc
     2461 agcttcaaga gattctgtcg tttgtacatc atccacatca aatgtcacat tcgaaatcgt
     2521 tggtgctagt ggctctacga tatgcacctt tacttctaca gggattgctt ctactccatc
     2581 ttcatttgta gattttaacg ttacggtata atctcctgca gtgctccata ttacagccgt
     2641 agcgaaatca ctttcaattg gtgaaccatc actcgtttta gcatgaatcg ctgcaagaaa
     2701 ttccgtgatg ctgacttccg cgtttttagc gtacgtaatt tctttatctg cggtaattac
     2761 tggcgctggc gacttggcga tgtgcacagt tacttctaca gggattgctt caactccatc
     2821 ttcatttgta gaccttagcg ttacggtata atctcctgca gtgccccaat ttacagccgt
     2881 agcgaaatca ctttcaattg gtgaaccatc attcgtttta gcatgaatcg ctgcaagata
     2941 ttccgtgatg ctgacttccg cgtttttagt gtatgtgatt tctttatctg cggtaattac
     3001 tggcgctggc gacttagcga tatgcactaa tacagtcacc gaagtcgctt ttactccatc
     3061 ctcattcact gcatttaatg tcacttcata cgttcccgct tttgcaaagt ccacaacact
     3121 ttcaaaatca gaagttagtg ttgcatcatc cgttacgctt gcagaaatat ctttgaaaaa
     3181 ggcagcttct gataccgttt cgtttttcgg gtaattcatc tctgcatctg cgctaataac
     3241 tggtacttta gatgctttga ttggttgtgt cactttcccc gaaaaagttc cttgaatagt
     3301 tgcctcttga acaggttcac taaattgata atcaacggca ttcacgcttt ttatatcttc
     3361 aaaaagccac ttgatttggt tattttgata ggttccctta ttagagatgg atttggcagt
     3421 ggttatttga ccgaaattct tcacttcatt atcaagaact aggtctgaca cgataacttt
     3481 ttgctttaga gtgattgttt gattcatcgc acttagcgtt gttaatacgg gattttccgt
     3541 tttcaaactt gttggcaata cactgatatg gttattgtct acggtgagtg tctgtaattt
     3601 agggaacgca tgtaggttct ctatttcagt cactaaattc tcgtacgcgt caattttgct
     3661 tactgcggat aaattttcaa gtccttctag tgtagtaatt ttgttgtaac ttataattac
     3721 cactgatact tttggcaggt tattaattac taactcttct atcgcgcaat gatctaactt
     3781 tacctcagag ctggttgatg gtaaattttc taaaatcacc ttacttaatc ctggtgtact
     3841 cgaaaaaaca atatcatctt gataagcgct agagccatta cctacagcta tcaaaattgg
     3901 aagatttttt aacgtaacct ctgtcaactc tgaactacta cctgtgtcgc actcaaaggt
     3961 ccataatttt ggctggtctt gaatatttat cttaattaaa ttattaccac gaacattcat
     4021 tgttcttaat aacgggaatt tttccgctgt tacttgatcc attaccacat tagtaagtgc
     4081 attccatccc agctctaact tctgtaattt agggaaggca tgcatacttt ctatttcagt
     4141 cactaaattc tcagatacgt ataaagtgtt tactgcagat aaattttcaa gtccttctag
     4201 tgtagtaatt ttgttgttac ttatatttac cattgatact tttggaaggt tattaattac
     4261 taactcttct atcgcgcaac gatctaatcg tactgaagag cttattgatg gtaaattttc
     4321 tagaatcacc ttacttaatc ctggtgtact agaaaaaaca atatcatttt gataagcact
     4381 agagccatta cctgcaacta ttaaagttgg aagatttttt agcgtaactt ctgtcaactc
     4441 tgaactacta cctgtgtcac acttaaaggt ccataattta ggttggtctt gaacatttat
     4501 attttttaag ttattactac gaatatcaac agcgcttaac ataggtaaat tactattcgc
     4561 gtttaggttg aaacttgtta ttttattatt agatacattt agattggaca aattcacgag
     4621 accattgagt gcagaaatat cagtgatttg gttcccgctt atacttaaag aggttaattt
     4681 tgaaagtaaa tctattcctg ttaaatcaac tatcccttta gatgtagcag ttagtgaagt
     4741 gattttattc aagtctgttt gcgatacttc ttgcgtgata tcctctgaac cagttgctgc
     4801 ttttgcaatt acagtagcta aagctgcatc aggaaaaaca gtttcatatg tttcgcctgc
     4861 ttgaaggaca gttttttctt gcttcagatt attggtaagg gtaggtttct gaggcgtttt
     4921 ttcttcgaga gctactttag gctctaacgt ggtttctgta tttactgatt tcgattcatt
     4981 ttcttccgcc atggtgatta acgggtatgc gaagagtgat tgaaaaagga ccactccaat
     5041 catgataatc tgttttgttt tgcttttcat aatctatctc cttctcgttg ttgttagcat
     5101 cttcagtaat aatagaatga atgagcaagt taaaaatacc tactatttca ttgaaaagta
     5161 ttatttaagt atatatccca taaactcctc cacacataac aattagtctt ttttcatcta
     5221 attcgttaaa gccctaaaat tcgcgtaaaa ttatgaggag atggagttgc tttatatata
     5281 atatatcaaa ttcacaacga gtttgtacta ttattattac tttttcatat agtatcaaga
     5341 gggattttta tctatcttcg gtaaatttat actataaaca gacaaattca cagaatagtt
     5401 tttaaaataa aaacagctga aacaaaggcg tagtagccat tgttagggaa tttaatatct
     5461 taagtattgt tccaatatta taatcgaccg caactcgtaa cattttcgac acaaaatagc
     5521 cgatattttg tatcttctgg tagtttctat ataaaatctc atcttcacgt gctaatatat
     5581 attttgtttg aacactgctg actatactaa acaacagcaa ctgaaggagc aactaactat
     5641 gaaactgtcc aaatttttta caataattgc attaagtgcc accgttacaa gtagcctacc
     5701 gataccaatg gtaaaagcag agagcacaac cgcaaatgaa actaaaatcg aaaatcaatt
     5761 accaaaaaca gatttaaaag aaacaccgaa agaaaaaaca acgaataaca acctgaaaaa
     5821 tcaacttgtc caagcaggaa ccaaaactta taatgattac tttccagatg ataatttagc
     5881 taaagcggta gcagaaaaaa tgaacaaaaa cgtggatgaa tctgtaactg tcgaggaatt
     5941 agctaaaata actaaactag atgcacggag ccaaggcata gaagatagca ctggaatcga
     6001 atatttgact ggattagaga tactttatct tgaggataat caactaaaaa gtatagatgt
     6061 cagtaaaaat ctaaatctaa aagacttggc ttgctctaac aacccgttag tgaatttaga
     6121 tgttagtaaa aatcttgctt tagaagaatt gacttgtgaa aacaatgaat taacacaact
     6181 agatgttagc aaaaatacag ctttagagta tttgtattgc cctagaaatc agttaacaaa
     6241 gctagatgtt agtaaaaact ccgctttacg ttatttggct tgcgatgtca atcagttaac
     6301 cagtttagat gttagtcaaa atccagcttt aacaaatctt ggttgtacta aaaaccaact
     6361 tacagattta gatgttagcc aaaatccgaa tttaagcact ttggtttgtt ctgataacca
     6421 gttaaccaac ttagacgtta gccaaaatca agctctagca tatttgactt gtgataacaa
     6481 tgggttgaag aatatagata ttgatcaaaa tctagcttta atagagttat cttgtgaaaa
     6541 caatcaacta acgaatttag atactaccca aaatctagct ttagagattt tatattgcga
     6601 tgacaatcag ctaacgaatt tagatgttag aaaaaacgta aatttattaa ttttatcttg
     6661 taataacaat caactaacga atctagctgt tggagagaca atattggatg taagctgtaa
     6721 taataaccag ctaaaagata ttagttcctt accagattat cttactgctg agaatggcga
     6781 gtaccaagca atggatcaaa cattagtagg tccaatccaa acgacacaaa ataatacact
     6841 tgtatacgct gttcctacag acctgttaga taaggatggt aacattgttt ccatcataaa
     6901 accagaaaat ggtggggttt atgatgcagc tactagaact attacgtggg aaaatttacc
     6961 agatagcgga gaagtgagtt acacatttga aagcaatgac tatggtgtgt tttctggaag
     7021 agttactgtg ccatatacag gaaaagaaac tgtcagcatt tctagtgatg atgagattag
     7081 ttacaaagaa ggcactacaa aaacagagga agccttcctc acagatatcc atgcaagcgt
     7141 aactccagca acagaaacca tcactagcaa ttttgctgac gtagtagact tacaaacacc
     7201 tggtaaatat gttgtaacac taagcgtggc agaatcagat attacgaaag acgtcattgt
     7261 gtatgtgaca gaggaaccaa gtaaagataa tcctgtcgct cctgttccac caaaagatcc
     7321 agataacaaa gtagcagaca atgaccaaaa tacggaaaaa ccccaagtaa aagtagacga
     7381 aaagacgttg ccaaaaacag gtgatattac tagcttaagt ttgtcattgg ctggaattat
     7441 ttgcttaagc tttggtattc tatttttcat caaacgaaag aaaaaaacag tttaataatg
     7501 agtaatagcc ttatcataag
//
LOCUS       DASDYO010000133         7188 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.133, whole genome shotgun sequence.
ACCESSION   DASDYO010000133 DASDYO010000000
VERSION     DASDYO010000133.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7188)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7188)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7188
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.133"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            87..989
                     /locus_tag="U0290_002568"
     CDS             87..989
                     /locus_tag="U0290_002568"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463855.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XRE/MutR family transcriptional regulator"
                     /protein_id="HEM2302600.1"
                     /translation="MGSYGELIREIRLSKGLTQKEVYTGIISRSYAIGFEKGKHEITL
                     SLFEEILKRIMVPLDEFFFIYRDFSSTEDDSFWIDFVELSGKNDVVGMQALLDKITLE
                     RTEQTEVRKAILHTRIQTINHYLRTNVFDESNISDEYKKIIHDYLWKMQTWTLEEVRI
                     FSNGISFFEEEVQIHFYQIMLKSYEKYRYYDRGRLLFCHLFANLTDELIIQNKINYAN
                     LVLEKLKEASETSGSFNSAFYRIVANYYQGAIWMKEGEVEKGYRQAKRAIQTWKELHY
                     EAIADLYSVVLKQFLEKENIQVED"
     gene            1153..2025
                     /locus_tag="U0290_002569"
     CDS             1153..2025
                     /locus_tag="U0290_002569"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463856.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2302601.1"
                     /translation="MISYGELIRQIRQSKKISQKEVYTGVISKSYAIEFEKGTHAISS
                     LLLEKIVAKLMVSMEEFFLMYHQEELPEKEDFWETYARTCKTDEASAWESLYQKISLE
                     KGKVNQVKSAAIKLELDHIKGKQVADKKAVQILENYLIEAVFWTLQDIFLFTRMMHYL
                     PLKSRVPFYYKLLNTLDRYRHFERGRSILQSALASIMDDFIERNEIEHMELMIKSLEK
                     ISEDCDGTYFKILCMYYRGIVRWGEGEEREGGEEIEQAVAILRALGYENKAIEYETMY
                     RQFARENNDIKTME"
     gene            2227..6273
                     /locus_tag="U0290_002570"
     CDS             2227..6273
                     /locus_tag="U0290_002570"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463857.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2302602.1"
                     /translation="MLKKIFIALIALVVIINTVSFTAVSASTPTWLEQTMNSNEPFIK
                     EIEKETGKTRANITQTDLEAITALRVTGASDIPTNIDMLTHLTTLEVKNGTLSSVSNS
                     VGNLKELKILVLNDNNLSTFPMIAFQLPKLEELQVSGGTIEEIPATITNMASHLKFLG
                     ILNNHLVKVPDAIFTTNWTNATGGDLDLMAAGNQIVTNIPANYISQFNNGDNLLEFYD
                     NNYQKQDQLTTTPGYTIDVPVGTDFNQLTPDKTKLALTSGRTLLAQHEFEYYDDGSSS
                     LIHNGVAAAPGQATIFIKSKFSTQSNKFARTQVTVNITALNGGPITVKHEDTKGQELA
                     PPVILNGKDGDPYTTTQKTFPGYTLVATPANQNGTFTMNPATVNYVYSANDYKLTSTF
                     KDAQGQELKAPVVDTKDYHIQDNYTTTAATIPGYSLVATPANQNGTFGAGNVTVNYVY
                     KKDDYTLTSTYKDTNGQELKAPVVDATTYHYQDTYTTTAAVFPGYTLVATPTNATGTF
                     GSSNITVHYVYQANGYQLTSTFKDQQGKTIAPDDVDTKTYHVNDPYTTTAKTIPGYTL
                     VTTPTNNQGNFGTSDITVDYVYKAEDYTLTSTYKDAQGKELKQPVVDSKKYHIQDNYS
                     TSAATIPGYTLVSTPANETGTFHTSDVTVNYVYKLTDLKLTSTYKDAQGTELKPPVVD
                     SKTYHIQDNYATTAAVIPGYTLVATPANQSGTFGSTDIQVNYVYQAVAYKLTSTYKDQ
                     QGNDLALPKVDSKTYHIQDGYTTSDIAIPGYTLVAAPTNQTGTFGASDVTVNYVYKAN
                     DYTLTSTYKDAQGKELKTPVIDSQKYHINDTYTTTGATIPGYTLVAAPANQSGTFGAA
                     NVTVNYVYKADDYTLTSTYKDANGKELKAPVVDSKTYHTKDNYSTSAATIPGYTLVAA
                     PTNQTGTFNTSNVTVNYVYKANEYTLTSTFKNVQGTELKPAIVKKGFIIKDGYATSGV
                     TIPGYTLVATPSNKKGTFGASNVTVNYVYKANGYALITTYKDTQGKDLKPLAIDTKTY
                     NINDPYTATALNISGYTLTTTPANEKGVFGASDETVNYVYKANDYTLTTTYKDANGKE
                     LQAPKVDAKTYHIQDTYKTTAAIIPGYTLVATPKNDQGTFGASNVTVNYVYQTNDYTL
                     TSTFKDAQGNELKAAEIDVQKYHIHDTYTSKAAVIPGYSLEKTPTNETGTFNASDIQV
                     NYVYKANDYQLTSTFKDQQGNEIALPTVDAKTYHIHDAYTTKAHLIPGYSLVAAPKNQ
                     IGAFGTSDVTVNYVYKKDAIIKPITPAKPTILTIKTPASKVVKTKVVKQTLPKTGDDD
                     AGLLNLLRLIGLVLILGVFLAVGSKKLR"
     gene            6411..7091
                     /locus_tag="U0290_002571"
     CDS             6411..7091
                     /locus_tag="U0290_002571"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463858.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302603.1"
                     /translation="MLEKKYQIHLQNHYDATSRQVQKKEIKVLKKHNNLLNGEVFPYQ
                     ICLESTMEYSRFMLWFEKEVQKIVKELWNQHFIIKLTLSQLHFRETILFLEHLKDFSK
                     RITIEFIGEDTPEIKKHFSVQEQEAFFIGKLRMLKKWKFIISKHIEGCSVEQTLAFTP
                     CLHEIKYTMSQQARMEENIIDLHMFIDFWEYWATHKKLKFVVEVKEKDFITKSLMHKK
                     VHVQFENA"
BASE COUNT         2673 a         1228 c         1379 g         1908 t
ORIGIN      
        1 tgtttggagt agagaaatta aagcatagac atagatactg cattccgact ttttgaaatg
       61 gaagaactta attaggggga tatcatatgg gttcatatgg cgaattgatt cgggaaatac
      121 ggctatctaa aggtttgact caaaaagagg tatacacagg aattatatct aggtcttatg
      181 caatcggatt tgaaaaagga aaacacgaga ttactttgag tttgtttgaa gaaattttaa
      241 agcggatcat ggttccttta gatgaattct tttttattta cagagacttt tcttcgacag
      301 aggatgatag tttttggatt gatttcgtcg agctatcagg taaaaatgat gttgtaggga
      361 tgcaggcgtt gctagataaa ataactttag agcgaacgga gcagacagaa gttagaaaag
      421 cgatacttca tacgagaatt caaacgatta atcattattt gcgtacgaat gtgtttgatg
      481 aatcgaatat ttctgatgaa tataaaaaaa ttattcatga ctatctttgg aaaatgcaga
      541 cgtggacttt agaagaggtt cgtatttttt ccaacggcat atcatttttt gaggaagaag
      601 tacaaattca cttttatcaa attatgttga aatcgtatga aaagtatagg tactatgata
      661 gaggaagact gctattttgc catctatttg ctaatctgac agatgaactc atcatacaga
      721 ataaaatcaa ttatgcgaat ctagtactcg aaaaattaaa agaagcatct gaaacaagtg
      781 gtagttttaa cagtgctttt tatcgaatag tagccaatta ttatcaaggg gctatttgga
      841 tgaaagaagg cgaagtggaa aagggctatc gccaagccaa aagagccatt caaacatgga
      901 aagaactgca ttatgaagca atagcagatt tgtatagcgt ggtattaaaa caatttttag
      961 aaaaagaaaa tatccaagta gaagattaac tatccgaaga atttctattt aaaaaacact
     1021 aaaatggagt cgttttagtg tttttttgtt tgtggtaaag atgttttatg tactatatat
     1081 agcactattt acagagagaa aagaaaggaa tgtaaaataa aggcaagaat tgagctaaga
     1141 ggaggtcttc ggatgataag ttatggtgag ctgattcggc aaataagaca gtctaaaaaa
     1201 atctcccaaa aagaagtgta cacaggggtt attagtaaat cttatgcaat tgaatttgaa
     1261 aaggggacac atgcaatatc aagcctatta ctcgagaaaa ttgtcgctaa gttaatggtg
     1321 agtatggagg aatttttctt aatgtatcat caagaggagt tgccggagaa ggaagatttt
     1381 tgggaaactt acgcgcggac atgtaaaacg gatgaagcaa gcgcttggga atccctttac
     1441 caaaaaatat cattagaaaa aggaaaagtt aatcaagtga aaagcgcggc gataaaactg
     1501 gagttagatc atataaaagg caaacaagtg gcggacaaaa aagcggttca aattttggaa
     1561 aattatttga ttgaagcggt tttttggaca ttgcaggata tctttttatt tacgcggatg
     1621 atgcactatt tgccactgaa aagccgagta ccgttctatt ataaattgtt aaacacgctg
     1681 gatagatacc gccattttga acgaggaaga agcattttac aatcggcgct ggctagtatc
     1741 atggatgatt ttatagagag aaatgaaata gagcatatgg agctaatgat aaaaagctta
     1801 gaaaaaatta gtgaggactg tgatggtact tatttcaaaa ttctttgtat gtattatcgt
     1861 ggaattgtgc ggtggggaga aggtgaagag cgcgagggtg gcgaagaaat cgagcaggca
     1921 gtagctattt tgcgagcatt aggttatgaa aataaagcga tagagtatga aaccatgtac
     1981 cggcaatttg cgagggaaaa caacgatata aaaacgatgg aatgaaagct aaaaaggact
     2041 attctttttg gttttctttt tttgagtagt atatatgcga cattagaaaa ttttaagact
     2101 ccgcatagta ttatatagac tgaagtacgg cttaaagcca tattgacagt gaagggaggg
     2161 gctttggcaa aggaataaat tgccaactga cactgcaaat ttagcgttaa aaggaggaag
     2221 attgttattt taaagaaaat atttattgca ttaattgcgc ttgtagttat tatcaataca
     2281 gttagtttta cggctgtctc tgcaagcaca cctacatggt tagaacaaac catgaatagt
     2341 aatgaaccgt ttataaaaga gattgaaaaa gaaactggta agacgagagc gaatattaca
     2401 cagacagatt tagaagctat aactgccttg cgagtaacag gggcaagtga tattccgact
     2461 aatatcgata tgttaactca tttaactacg ttagaagtta agaatggaac attatcttcc
     2521 gtatctaact cagtggggaa tttaaaggag ttaaaaatct tagttctgaa tgataataat
     2581 ttaagcacct ttccaatgat tgctttccaa ctacctaagt tagaagaatt acaagtttct
     2641 gggggaacaa tagaagaaat ccctgccaca ataacaaata tggcgagtca tttgaaattc
     2701 ttagggatat taaataacca tttagtgaag gttccagacg caattttcac tacgaactgg
     2761 acaaatgcta ctgggggaga cttagactta atggctgcag ggaaccagat tgtaaccaat
     2821 attcctgcta actatataag ccagtttaat aatggggata acctattaga attttacgat
     2881 aacaactatc aaaaacaaga ccaactaact acaacacctg gatataccat tgatgtacct
     2941 gttggaactg attttaatca attaacacca gacaaaacga aactcgcact aacatctgga
     3001 cgaactttac tcgcgcaaca cgaattcgag tattatgatg atggttcaag ttcactaatc
     3061 cacaatggcg tagcagcagc accgggtcaa gcgaccattt tcatcaagag caagttttcc
     3121 acgcaatcga acaaatttgc cagaacacaa gttacagtaa acatcactgc gctaaacggc
     3181 ggacctatta cagtgaaaca tgaagataca aaaggacaag aacttgcgcc acctgtcatt
     3241 ttaaatggta aagacgggga cccttataca acgacacaaa aaactttccc aggctatact
     3301 ttagttgcaa caccagccaa tcaaaatggt acattcacca tgaacccggc tacagtcaac
     3361 tatgtataca gcgcaaatga ttataaacta acatctactt tcaaagatgc ccaaggtcaa
     3421 gaactgaaag cgccagttgt ggatacaaaa gattaccata tccaagacaa ctatactaca
     3481 acagcagcaa ccattccggg ctattcttta gttgcaacac ctgctaatca gaacggaact
     3541 tttggagctg ggaatgttac cgttaattat gtatacaaaa aagacgatta tacgctcact
     3601 tccacttaca aagatacgaa cggtcaggaa ctaaaagcac cagtggtaga tgcgacaacg
     3661 tatcattatc aagacacgta tacaacaaca gccgcagttt tcccaggtta tacgttagta
     3721 gcaacaccaa ccaacgctac tgggacattt ggttcgtcaa acatcactgt tcattacgta
     3781 tatcaagcaa atggctatca attaacttct acatttaaag atcaacaagg gaagacaatc
     3841 gcaccagatg atgtcgatac taaaacctat cacgtgaacg atccctatac aacaactgcc
     3901 aaaacgatcc cgggctacac attagtgacg acccctacaa acaaccaagg taattttgga
     3961 acaagcgata ttacggttga ttacgtttat aaagcagaag attatacatt aacttcgacg
     4021 tacaaagatg cgcaaggtaa agaattaaaa caacccgttg tagatagtaa aaaatatcat
     4081 attcaagaca actattctac aagtgcagca accattccgg gttatacgct agtatcgaca
     4141 cctgcgaacg aaacaggaac cttccatacg agcgatgtca cggttaatta tgtgtataaa
     4201 ttaacagact taaaattaac ttcgacatat aaagatgcgc aaggaacgga gttaaaacca
     4261 cccgttgtag atagtaaaac gtatcatatt caagataact atgctacaac tgcagctgtc
     4321 attcctggct atacattagt cgcaacacca gcgaaccaat caggtacttt tggtagcacg
     4381 gatatccaag tgaactatgt gtatcaagca gttgcttata aactaacttc gacgtataaa
     4441 gatcaacaag ggaatgattt agctttacca aaagtagatt cgaaaacgta ccatattcag
     4501 gatggttaca cgacgagtga tattgctatt ccaggttata cattagtcgc ggctccaacg
     4561 aatcaaacag gtacatttgg cgcgagtgat gtaaccgtga attatgtcta caaagccaat
     4621 gactacacac taacttcaac atataaagat gcgcaaggta aggaattaaa aacgccagtc
     4681 atagacagtc aaaaatatca cattaacgac acttatacta cgacaggagc tactattcca
     4741 ggttatacat tagtcgcagc accagcgaat caatcaggta catttggcgc ggcgaatgta
     4801 acagtcaact atgtatacaa agcagatgat tacacattaa cttcgaccta caaagatgca
     4861 aacggcaaag aattaaaagc gccagttgta gacagcaaaa cttaccatac aaaagataac
     4921 tattctacta gcgcagcaac cattccaggc tacacattag tggcagcacc aacaaatcaa
     4981 acaggtacat ttaatacgag caatgtgaca gtcaattatg tttacaaagc gaatgaatat
     5041 accttaactt ccactttcaa aaatgtacaa ggaacagaac taaaaccagc tatcgtgaaa
     5101 aaaggattta ttattaagga tggctatgcg actagcggcg taacaattcc gggctataca
     5161 ttagtggcaa caccatcgaa caaaaaagga acatttggtg ctagtaatgt aacagttaat
     5221 tatgtatata aagcgaatgg ttatgcatta atcacaacat ataaagacac acaaggtaaa
     5281 gacttaaaac cactagccat tgatacaaaa acatacaata ttaacgaccc atacactgca
     5341 acggcgctaa acatttcagg ttacacatta acaactacac cagccaatga aaaaggtgta
     5401 tttggcgcaa gtgatgaaac agttaattac gtatataaag caaatgatta tacgttaaca
     5461 actacctaca aagacgcaaa cggcaaagaa ctacaagcac ctaaagtaga cgcgaaaact
     5521 tatcatatcc aagacacata caaaacaact gcagcaatca ttcctgggta tacattagtg
     5581 gcaacaccta agaatgacca aggtactttt ggagcgagca atgtaactgt gaattacgtg
     5641 taccaaacaa atgattacac gctaacttcg acatttaaag atgctcaagg aaacgaatta
     5701 aaagcagcag aaatagacgt acaaaaatac catattcatg acacttacac atctaaagca
     5761 gccgtgattc cgggttacag tttagaaaaa acaccaacga acgaaacggg tacttttaat
     5821 gcaagtgata ttcaagtaaa ttatgtgtat aaagcaaatg attatcaact tacttctact
     5881 tttaaagatc aacaaggcaa cgaaatagca ttaccaacag ttgatgcaaa aacttatcac
     5941 attcatgacg cttatacaac gaaagctcac ttgattccag gatatagcct agtagctgca
     6001 ccaaagaacc aaataggtgc ttttggaaca agtgacgtaa cagtcaatta tgtgtataaa
     6061 aaagatgcta ttatcaaacc tattactcca gcgaaaccaa ctattcttac aataaaaaca
     6121 cctgcaagca aagtagttaa gactaaagta gttaagcaaa ctcttcctaa aacaggggat
     6181 gacgatgccg gactattaaa cctgctaaga cttataggac tcgttttaat tttaggcgta
     6241 tttttggcag tcggaagtaa aaaattaaga taagtataac gtagattaaa acaccgccgc
     6301 agattgttgt ggtggtgttt taactaatat atccgacatt agaaataccc attttggaaa
     6361 agatgtatga tatttattgt aaagaatttc acaaaggaag aggcgattct ttgttagaga
     6421 aaaagtatca aatccattta caaaatcatt acgatgcaac gagtagacaa gtgcaaaaga
     6481 aagaaataaa agtcttaaaa aaacacaata atttattaaa tggggaagtt tttccatatc
     6541 aaatttgttt agaaagcacg atggaatatt caagatttat gttgtggttt gaaaaagaag
     6601 tccaaaaaat cgtgaaagaa ctttggaatc aacattttat tatcaaacta acattatccc
     6661 aattacattt ccgcgaaacc attctatttt tagagcattt aaaagatttt agtaaacgga
     6721 taacgattga atttatcggt gaagacacac cagaaattaa aaaacatttt tctgtccaag
     6781 agcaagaagc gttttttata gggaaactaa gaatgctaaa aaaatggaaa ttcattattt
     6841 ctaaacatat cgaaggctgc tcagtggaac aaacccttgc ttttaccccg tgtctacatg
     6901 aaataaaata cacgatgagt cagcaagcac gaatggaaga aaatattatc gatttgcaca
     6961 tgttcatcga tttttgggaa tattgggcaa cacataaaaa attgaaattc gtagtcgagg
     7021 tgaaggagaa agattttatt acgaagtctt tgatgcataa aaaggtccac gtacaatttg
     7081 agaatgcgta gcggaagaat tatagccgag ctctgtttat tctatcactc aagaagcctg
     7141 agggagcttt ttgactgtat ttttttgcca ataagtaatc tgaaaagt
//
LOCUS       DASDYO010000134         7067 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.134, whole genome shotgun sequence.
ACCESSION   DASDYO010000134 DASDYO010000000
VERSION     DASDYO010000134.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7067
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.134"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(107..1375)
                     /locus_tag="U0290_002572"
     CDS             complement(107..1375)
                     /locus_tag="U0290_002572"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463703.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1254 domain-containing protein"
                     /protein_id="HEM2302604.1"
                     /translation="MIMNANLEVNAEVVKESYVYLLSRYLVLRQENFDTKEDKIPYNT
                     LKHNSISPADANFVNPNFDVVYSEAWIAVDDENAVILEVPEIKNRYYTVQLLDGWGEV
                     VTNINERNYPEHPHGKFAFVKKGTNPSVPSDAVKIELPSEKVKVLLRVEQKDDPEGAV
                     KLQKAFKFDAPDNIKIKEPLEIPHFTNAEFLLEEIYSNLEELLATYPDKMPRATEFQD
                     KARQVAAYIELGDEQKAEVRNLIVKEAIPYFTNGAKGFGTQKGGWSVTYVAGAFENDI
                     LARAIINYGGIWANSIQEALYFIGQKGTDNELLTGDKVYKIHFPADELPSELADAFWS
                     VTLYSVPDYHVIPNKLNKFCINNYSGPKLSEDGSLTLYIASEKPADVDPGNWLPSKAG
                     KEFSLNFRLYVPKKEVLEGKVFLPPLEVIK"
     gene            complement(1437..2294)
                     /locus_tag="U0290_002573"
     CDS             complement(1437..2294)
                     /locus_tag="U0290_002573"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463702.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GRP family sugar transporter"
                     /protein_id="HEM2302605.1"
                     /translation="MNIVIALIPAVMWGIMPLVVSKIGGKPRQQIIGTTFGALAFAIG
                     VFIFTNPEYTATIIIASFISGAFWSLGQMNQFRAFTQVGVSKTMPLSTGMQLVGTSLF
                     GVFAFHEWGTTSKLVLGFSALALIIIGIFLTSYQQHKDENSGQNMKKGIITLLISSVG
                     YVGYVVITRWFDISGWDAILPQAIGMVVAGLLFSIKSEEKRFTKQTWLNMIPGVMWAT
                     GNLALLFSNKLVGIATGFSLSQMGVVISTIGGILFLGEKKTKKELILVIIGVVLVIIG
                     GTMIGIAKS"
     gene            2408..2692
                     /locus_tag="U0290_002574"
     CDS             2408..2692
                     /locus_tag="U0290_002574"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463701.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AbrB/MazE/SpoVT family DNA-binding
                     domain-containing protein"
                     /protein_id="HEM2302606.1"
                     /translation="MKSTGMVRKIDELGRVVIPIEIRRTMNLNVKDPLEIFTDEDAIV
                     LKKYSAGLVCDVTGEFSVDNKKFVDGKLTLSKEGAAELMEEIKRRFGDTL"
     gene            complement(2737..3618)
                     /gene="rsmI"
                     /locus_tag="U0290_002575"
     CDS             complement(2737..3618)
                     /gene="rsmI"
                     /locus_tag="U0290_002575"
                     /EC_number="2.1.1.198"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463700.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="16S rRNA
                     (cytidine(1402)-2'-O)-methyltransferase"
                     /protein_id="HEM2302607.1"
                     /translation="MIKSQKSFSGASQGALYLVPTPIGNLEDMTFRAIRMLKEADIIA
                     AEDTRNTVKLLNHFEITTRMTSYHQFTKENKEDNIIQRMLDGEVVALVSDAGMPSISD
                     PGYELVQSALNANIPVIPLPGANAALTALIASGLAPQPFYFYGFLPRQNKERTQAIEK
                     LAAREETWILYESPHRLKETLKAIIKITGNDRKIVLCRELTKRFEEFLRGTVEDALNW
                     AMDEEVRGEFCLIIEGNANPPLAEEQLWWQELDIKTHVSTIMEQENVSSKDAIKTVMK
                     ARNLPKREVYSAYHEIK"
     gene            complement(3615..3884)
                     /locus_tag="U0290_002576"
     CDS             complement(3615..3884)
                     /locus_tag="U0290_002576"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463699.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GIY-YIG nuclease family protein"
                     /protein_id="HEM2302608.1"
                     /translation="MAKASEHFFYVLKCSDNSYYGGYTTDVIRREAEHNAGIRCKYTK
                     TRRPVKVIHFEKFETRSEATKAEAAFKKLSRKNKDAYLIQREESE"
     gene            complement(3868..4620)
                     /locus_tag="U0290_002577"
     CDS             complement(3868..4620)
                     /locus_tag="U0290_002577"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463698.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA1(Val) (adenine(37)-N6)-methyltransferase"
                     /protein_id="HEM2302609.1"
                     /translation="MEKLELIGDERLDYLLAENLRIIQSPSVFSFSIDAVLLAKFSYL
                     PIRKGKIIDLCSGNGIIPLLLSTRTKAKIVGVEIQERLADMAKRSVAYNQLEDQIEII
                     EYDLKKITDLIPKERADIVTCNPPYFATPDTSLKNTNEHFRIARHEVMCTLEDTIRVA
                     ASLLKQGGKANFVHRPERLLDIIDIMRKYRLEPKRIQFVHPRSDREANTVLVEGIKDG
                     KPGVKYVPPVIVYDELGEYTPVIKEILYGESE"
     gene            complement(4678..5067)
                     /gene="yabA"
                     /locus_tag="U0290_002578"
     CDS             complement(4678..5067)
                     /gene="yabA"
                     /locus_tag="U0290_002578"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463697.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA replication initiation control protein YabA"
                     /protein_id="HEM2302610.1"
                     /translation="MDKKAIFDSVSNMEEQIGELYQQLGDLKTNLGEMLEENNRLNLE
                     NEHLRRRLSLTDEATPEPKAEIEAEHGVMAPNRKEAMQQMIELGEGYDNLVQLYKEGF
                     HVCNVHFGSPRGNDEDCLFCLSLLNKK"
     gene            complement(5078..5911)
                     /locus_tag="U0290_002579"
     CDS             complement(5078..5911)
                     /locus_tag="U0290_002579"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463696.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="stage 0 sporulation family protein"
                     /protein_id="HEM2302611.1"
                     /translation="MLKIVGVRFKDVGKIYYFSPGELEITENQGVIVENAQGIEFGKT
                     VIEPRYVDEEDVVLPLKKVLRIATEADYKCVAENGDSCQKAFLLCDEKIRERELEMSL
                     VDVDYTFDRNKIIFYFTAEGRVDFRELVKDLASVFRTRIELRQIGVRDEAKLLGGIGP
                     CGRMLCCSTFLGDFEPVSIKMAKDQNLSLNPTKISGLCGRLMCCLKYENDEYEQAKRE
                     MPDVGVKVKTPEGIEARVSGINLLSRILQVSLPEEETVIEYELDELRPYNEFLKQPAK
                     S"
     gene            complement(5917..6909)
                     /gene="holB"
                     /locus_tag="U0290_002580"
     CDS             complement(5917..6909)
                     /gene="holB"
                     /locus_tag="U0290_002580"
                     /EC_number="2.7.7.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463695.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA polymerase III subunit delta'"
                     /protein_id="HEM2302612.1"
                     /translation="MGLQDELTVMQPVVMKIFSKSVRENRLSHGYLFEGARGTGKKRT
                     ALWLAQSLFCLESTETELACGKCANCTRIASHNHPDVHLLEPDGASIKIDQVRALKQE
                     LSKRGMESDQKVVIIYDAEKMTVQSANSLLKFIEEPEGGLLLLFLTTNPGQILPTIQS
                     RLQPVTFKSLTFDSLLASLTAAGISEQKARIYASITGSVEEAKAFEESEWFSEARNVV
                     IKLYEGIHHQGTSPLIIIQESWMPLFKEKDKMALGLELLLLLYRDRLHLTLDENYEPI
                     CTAQKEMLGQDALRKSLSETTGEIEKILAAKSKLDSNMNTQLLMEQLVLEIQGR"
BASE COUNT         1992 a         1482 c         1230 g         2363 t
ORIGIN      
        1 tagtcctatt acaatacaaa aagtgtaagt gtttttattt ttatatacaa gaaagctaag
       61 tatgttacca cccaaaattg gtaattgcat acttagcttt ttaggtttat tttataactt
      121 ccagcggtgg taagaatact ttcccttcca acacttcttt tttcggaaca tatagtcgga
      181 aatttagtga aaactctttt ccagccttgc ttggtagcca gtttcccgga tctacatcag
      241 ctggtttttc tgacgcaatg tagagcgtca agctgccatc ttcacttagt tttggacctg
      301 agtaattatt gatgcagaat ttgtttaatt tatttgggat aacgtggtaa tctggaacac
      361 tgtataaggt aacggaccaa aaagcatctg ccagttctga tggaagttca tctgccggaa
      421 aatggatttt ataaacttta tcgccagtta ataactcatt atccgtacct ttttgaccga
      481 tgaagtatag tgcttcttga atagaattcg cccaaatacc gccgtaatta atgattgctc
      541 gcgctaaaat atcattttcg aacgcgccag ctacgtaagt aacagaccat ccgccttttt
      601 gtgtaccaaa tccttttgca ccatttgtaa aatatggaat ggcttctttc acaattaagt
      661 ttcttacttc agctttttgc tcatcaccaa gctcgatata ggctgccact tgtcttgctt
      721 tatcttggaa ttcagttgct cttggcattt tatctggata agttgctagt agttcttcca
      781 aattggaata aatttcttct aataagaact ctgcattagt gaaatgtgga atctcaagtg
      841 gttctttgat ttttatattg tctggtgcat cgaatttgaa tgctttttga agttttactg
      901 caccttcagg atcgtctttt tgttctacgc gaagaagtac ttttactttc tctgatggta
      961 attcgatttt tacagcgtca cttggaacgg aaggatttgt tcctttttta acgaaagcaa
     1021 attttccatg tggatgctct ggatagttac gttcattgat atttgttacc acttcgcccc
     1081 agccgtctaa aagttgcaca gtatagtagc gatttttaat ttctggtact tctaaaataa
     1141 cggcattttc gtcatctaca gctatccaag cttctgaata aaccacatca aagttcggat
     1201 ttacaaaatt tgcatctgct ggtgaaatcg aattgtgctt aagtgtgtta tatggaattt
     1261 tatcttcttt tgtatcaaaa ttttcttggc gtaaaacgag atatcgcgat aataaataaa
     1321 cataggattc ttttacaacc tcagcattta cttctaaatt cgcattcatt atcagtataa
     1381 ccacctttaa tttagattaa tttaagtata gcattgtatc ctctcgaaag ctgttcttag
     1441 ctttttgcaa ttccaatcat cgtaccaccg ataattacta agacaacccc gataatgacc
     1501 agaataagtt ctttcttggt tttcttctct cctaggaaaa ggattccacc aatggtcgaa
     1561 atgacaacac ccatttgtga gagcgaaaaa cctgtagcga ttccaactaa tttatttgag
     1621 aatagtagag ccaagttacc agtagcccac atcacccctg gaatcatatt taaccaggtt
     1681 tgctttgtaa aacgtttttc ttcagactta atagaaaata ataatcctgc gactaccatc
     1741 ccaattgctt gaggtaaaat cgcgtcccac ccactaatat caaaccaacg agtgataacg
     1801 acatatccta cataacctac ggatgaaata agtaaagtga taattccttt tttcatattt
     1861 tggccggaat tttcgtcttt atgttgttga taacttgtta agaaaatccc gataataatt
     1921 aatgctaatg cggaaaatcc taatactaat ttggaagttg taccccattc atgaaaagca
     1981 aatacaccaa aaagcgatgt acctactaac tgcattcctg tcgaaagtgg cattgttttt
     2041 gatacgccta cttgtgtaaa tgcccggaac tgattcattt gacctaagct ccaaaatgcc
     2101 cctgaaataa aactagcaat aataatggtt gctgtatatt ctggatttgt aaaaataaaa
     2161 actccgattg cgaaagctag tgcgccgaat gttgtaccaa tgatttgctg cctcggttta
     2221 ccgccaattt ttgaaacaac taatggcata atcccccaca tcactgccgg aattaatgcg
     2281 ataactatgt tcatttttat tccccctaat tcttctgctt atggtctata cccttttcct
     2341 catgaaatca ttcctattcc cgtaattatc tgttaaaatg aattaaaatt atcaagaagg
     2401 tgagaaaatg aaatcaactg gaatggtaag aaaaatcgac gaacttggtc gtgtggttat
     2461 accgattgaa ataagaagaa cgatgaacct aaatgtaaaa gaccctttag aaatatttac
     2521 agatgaagat gcgattgtat tgaaaaagta ttccgctggc ttggtttgtg acgttaccgg
     2581 agaattttct gttgataaca agaaatttgt ggacggtaaa ttgacactca gtaaagaagg
     2641 cgctgcggaa ttaatggaag aaattaaacg ccgctttggt gatacattat aaaaaaaatc
     2701 atgcgcgagt tcccattaaa ggattcgcgc atgattttat tttatttcat gataagcaga
     2761 gtaaacttct cgttttggta aatttctcgc tttcataacc gttttaattg catctttaga
     2821 actaacattt tcctgttcca ttatggtgct tacgtgcgtt ttaatatcga gttcttgcca
     2881 ccagagttgc tcttctgcaa gcggtggatt ggcatttcct tcaataatca agcaaaattc
     2941 tccgcgaact tcttcgtcca ttgcccagtt taacgcatct tcaaccgttc cacgtaaaaa
     3001 ttcttcaaat ctttttgtga gctctcgaca caagacaatt ttccgatcat ttccagtgat
     3061 tttgatgatt gcttttagtg tttcttttaa acgatgtggt gattcatata aaatccacgt
     3121 ttcttcgcgc gccgctaatt tttcaatcgc ttgagtacgt tctttgtttt ggcgtggaag
     3181 aaatccgtaa aagtaaaacg gctgcggggc aagaccagat gcaatcagtg cagttaatgc
     3241 agcattggct cctggtagag ggatgacagg aatattagca tttagcgcac tttgaacaag
     3301 ttcgtatccc gggtcagaaa tagatggcat ccccgcatca ctaacaagcg ccaccacttc
     3361 accgtctaac atccgctgaa taatattatc ttctttattt tccttcgtaa actgatggta
     3421 gctcgtcatt cgggttgtaa tttcaaaatg atttaaaagt ttcacggtgt tccgcgtatc
     3481 ttccgctgca ataatatccg cttctttaag catgcgaatt gcacgaaaag tcatatcttc
     3541 taaattacca atcggcgttg gcactaaata taatgctcct tggctggctc cactgaaact
     3601 cttttggctt tttatcattc ggactcctcc cgttgtatta aataggcgtc tttattttta
     3661 cgtgataatt ttttgaacgc agcttctgct tttgtagctt cacttcttgt ttcgaatttt
     3721 tcaaaatgaa tgacttttac cgggcgacgt gtttttgtat atttacatct aattcccgca
     3781 ttatgttccg cttctcggcg aataacatct gttgtatagc caccataata ggaattgtca
     3841 ctacatttta gcacataaaa gaaatgttca ctcgctttcg ccatataaaa tctccttaat
     3901 tactggtgta tattccccta gctcatcata tacgataaca ggtggaacat atttcacgcc
     3961 aggtttcccg tctttgattc cttctacaag taccgtattc gcttctctat ctgagcgcgg
     4021 gtgcacgaat tgaatgcgtt tcggttccaa gcgatatttt ctcattatat caatgatgtc
     4081 tagtaatcgt tccggacgat gaacaaaatt cgcttttcca ccttgtttta aaaggcttgc
     4141 ggctacacga atagtatcct ctagcgtaca cataacttca tggcgagcaa tccgaaaatg
     4201 ttcattggta tttttcaaac ttgtatccgg ggttgcaaaa taaggtggat tacaggtaac
     4261 aatgtccgcg cgctcttttg gaataagatc tgtaattttt ttcaaatcat attcgattat
     4321 ttcgatttgg tcttccagtt gattataagc aacacttctt ttcgccatat ctgccagacg
     4381 ttcttgaatt tcaacaccaa ctattttcgc ttttgttcgc gtactaagta gtaaaggaat
     4441 aatcccattt ccgctacaca aatcaattat tttcccttta cggattggta aataactaaa
     4501 tttagcgagg agaaccgcgt ctatcgagaa agaaaatacc gatgggcttt gaataatccg
     4561 caaattttct gctagtaaat aatctagtct ttcatcacca attaattcga gtttttccaa
     4621 atgattcacc ttttctagca aaaagccctt ctcttgaatt gagaaaggcc cgtcatgtta
     4681 ttttttattg agcaaggata agcaaaataa acaatcttca tcattaccac gcgggctgcc
     4741 gaaatgtaca ttgcaaacat gaaatccttc cttgtaaagt tggacaagat tgtcataacc
     4801 ttccccaagt tcaatcattt gctgcattgc ttccttacga ttaggcgcca tcacaccgtg
     4861 ttccgcctct atttcggctt taggttctgg tgtcgcttca tccgtcaaag aaagtctgcg
     4921 tcgcaaatgt tcgttttcaa ggtttaatcg gttattttct tccaacattt cgcctaagtt
     4981 tgtctttaga tctccaagtt gctgatacaa ttcgccaatt tgctcctcca tattactgac
     5041 tgagtcaaaa atagcttttt tatccaattt tttcacctca agactttgcc ggttgtttta
     5101 gaaattcgtt atatggacgt aactcatcca actcgtattc tataaccgtc tcttcttcgg
     5161 gcaaactcac ttgtaggatt ctagacagca agttgattcc cgaaacacgt gcttctatgc
     5221 cttctggagt ttttactttt acaccaacat ctggcatttc acgtttagct tgctcatatt
     5281 catcgttctc atatttcaag caacacatta atcgtccaca taaaccagaa attttcgttg
     5341 ggttaaggga caggttttgg tctttcgcca ttttgatgga aactggttcg aaatcaccta
     5401 agaaagtgga gcagcagagc atacgaccgc atgggccaat cccaccgagc aatttcgctt
     5461 catcacgtac accaatttgg cgaagttcga tgcgagtccg aaaaacagat gctaaatctt
     5521 tcacgagctc ccggaaatcg acgcgacctt ctgcggtgaa ataaaaaatg attttattac
     5581 ggtcaaatgt gtaatcaaca tcaactaaac tcatttcaag ttcgcgctcg cggatctttt
     5641 catcacaaag taaaaaggct ttctgacacg agtcgccatt ctcagcaacg catttataat
     5701 ccgcttctgt tgcgatacgc agtactttct taagtggtaa aacgacatct tcttcgtcca
     5761 cgtagcgcgg ttcaatgact gttttaccaa attcaattcc ttgtgcattt tcaacaataa
     5821 caccttggtt ttctgtgatt tccagttcgc caggtgagaa ataatatatt ttaccaacgt
     5881 ctttaaaacg gacgcctaca attttaagca tagcgattac ctcccttgga tttccagaac
     5941 taactgctcc attagaagtt gcgtgttcat attggaatcc agttttgatt tcgcagcgag
     6001 aatcttctcg atttcccctg tggtttcgga cagtgattta cgcagcgcat cttgtccgag
     6061 catttctttt tgcgcagtac aaataggttc gtagttctcg tcaagtgtaa ggtgtagccg
     6121 gtcgcggtac agcagtaaca ataattcgag cccaagcgcc atcttatctt tctctttaaa
     6181 aagtggcatc catgattctt gaatgataat taatgggctg gttccttgat ggtgaattcc
     6241 ttcatataac ttgatgacaa catttcttgc ctcactaaac cactcactct cttcaaaagc
     6301 cttcgcttct tccacactcc cagtaatgct agcataaatc cgcgcttttt gttcggaaat
     6361 gcctgctgct gttagtgatg cgagtaaact atcaaaagtc agtgatttga atgtgacagg
     6421 ttgcagtctt gattgaatcg ttggcaaaat ttgcccgggg tttgttgtta aaaataataa
     6481 taacaaaccg ccttctggtt cttctataaa tttcagcaga ctattggctg attgaacagt
     6541 cattttttct gcatcgtaaa tgataactac tttttgatcc gattccattc cgcgtttact
     6601 aagttcttgc ttcagcgcgc gaacctgatc aatcttaata ctagctccat ctggctctag
     6661 caaatgaaca tccggatgat tatgacttgc tattctcgtg caattggcac acttcccaca
     6721 agcaagctcg gtttcagtgc tttctaaaca aaaaagactc tgagctaacc aaagtgctgt
     6781 gcgtttcttg cctgtacctc ttgctccttc gaataaatag ccgtgagata atcgattttc
     6841 gcggacactt tttgaaaaaa tcttcatgac cactggttgc atcactgtaa gttcatcctg
     6901 taatcccaca aaaaacttcc tttctatcca tattgtaata ttataccatg accaagctta
     6961 aatagcttcg gaattttaac aaaaaaataa cgttggattg gttaactaat attacaattt
     7021 caataaatta gttatttttc taaaatttaa ttggacagta caacgtt
//
LOCUS       DASDYO010000135         7011 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.135, whole genome shotgun sequence.
ACCESSION   DASDYO010000135 DASDYO010000000
VERSION     DASDYO010000135.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 7011)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 7011)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..7011
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.135"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            13..648
                     /locus_tag="U0290_002581"
     CDS             13..648
                     /locus_tag="U0290_002581"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464313.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FMN-dependent NADH-azoreductase"
                     /protein_id="HEM2302613.1"
                     /translation="MSKVLFIKASPLPNEVSRSSQVAETFMAEYKAKNPSDTVEELVL
                     YNTEVPLLDLELMTAGRELQAGKAFTDLAPDVQKKLNAYNALTEQFLAADKYVFVFPL
                     WNLGIPPLLKAYIDTFVIAGKSFRYTEHGPEALLKDKKAILIHGSGGIYSAGPTSSFT
                     HGEPYLRTILQFIGINVVPSIFVEGIDHNPSKEAEIVAAAKAVAQESAAEF"
     gene            842..2218
                     /locus_tag="U0290_002582"
     CDS             842..2218
                     /locus_tag="U0290_002582"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464314.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM2302614.1"
                     /translation="MEEQKEELQRGLKNRHIQLIAIGGAIGTGLFLGAGKSIHLAGPS
                     IMLVYLIIGAILFFVMRALGELLIHNPTTGSFTEFAEQFIGPWAGFITGWTYWFCWIV
                     TGIAEITAVGMYVKFWVPDLPQWIPALACVLILLLFNLATVKAFGEIEFWFAIIKVVV
                     IIALIVIGFVLVFIGYKHGTSTASFSNLVDYGGFFPNGIAGFLLAFQMATFSFVGIEL
                     VGVTAGEADDPERTLPKAINNIPIRILIFYIGALLVLMSIYPWSNIDPNTSPFVSVFT
                     MIGIPAAAGIINFVVLTAAMSSCNSGIFSTSRMLYTLSAEGKAPKKMHHLSSNGVPAT
                     ALITSTACLLIGVFLNYFLPEQVFILVTSIATICFIWVWGVILVAHLRFRHKHPEIAE
                     KSKFKMPLSPLMNWVSLIFFGGLLVILGFAADTRIALFVTPVWFLILGIAYQVLKASN
                     RKTKIRHN"
     gene            2483..6913
                     /locus_tag="U0290_002583"
     CDS             2483..6913
                     /locus_tag="U0290_002583"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464315.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-hydroxyacyl-CoA dehydratase"
                     /protein_id="HEM2302615.1"
                     /translation="MIHAGLDVGSTTAKAVALNDQGDILFQTYRRHYSDIKKVTLEIM
                     QDMQKKCGMTEMTFKITGSSGLAISKFLNVPFVQEVIACTEAVEQVIPETDVVIELGG
                     EDAKIIYFSGGIEQRMNNACAGGTGAFIDQIATLLQTDPTGLNELAQNANTIYPIASR
                     CGVFAKTDVQPLLNEGARKEDIAASIFQSVVTQTISGLACGRPIRGKVAFLGGPLTFL
                     DQLRYRFTETLKMKDSDIIAPQNAEYFIALGTAFTGLNDVPLKVDDMIYRLSNMDMTT
                     MATDTVILPALFEKQEDLEAFRARHNQMKAKRAKLEDYEGDAYLGIDAGSTTTKLILM
                     SQTNEILYSFYSSNNGNPLQSVIDATSDLYEILPEKVRVAQSGITGYGESLIKAALKI
                     DVGEIETVAHYRAAREFLPDVDFILDIGGQDMKCMKIKKGALDSLMLNEACSAGCGSF
                     LETFAQTLNLSIEEFAARALEAKAPVDLGSRCTVFMNSKVKQVQKEGVSMEDLSAGLA
                     YSVVKNALQKVIKLRSPKDIGEKVIVQGGTFYNESVLRAFELLTGREVVRPDIAGMMG
                     AYGAALIAREHYETGEVTEMLVLEKLREFSAETSQSRCNLCSNTCQLTVTRFGDDRMF
                     VSGNRCERGERVETKRNLLPNLYAYKLKRTFDYKSLKKSESTRGTIGIPRALNVFENY
                     PLWHTILTNLGFRVVLSSKSSKNLYDKGIETIASEAVCFPAKLTHGHIMDLIKKKADR
                     IFYPSVVYEKPEFGEATNNFNCPVVAGYPEVIRVNVDALEEKNIPMISPFLTLDNEKA
                     LIEQMSLAFPEVPAADMEKAVQAGLEEAELCRKDIQAEGEAALTYIKKNKIKGIVLAG
                     HPYHIDPEVNHGIPELITMNGMAVLTEDSISHLGEMDHKLRVENQWKYHARLYRAASF
                     TAKSEDLEFVQLTSFGCGLDAITTDMCQEIIEGHNKVYTLLKIDEINNLGAARIRVRS
                     LKAAMEEREKNNVKPGIMPKPKERPLFTKEMKKTYTILAPQLAPTHFEMLEAACKVGG
                     YNLEVLPAVTPRAVDEGLRYVNNDACYPAILTIGQMMDALKHGDYDVNNLAVLMTQTG
                     GGCRATNYISMLKKALGEAGLDHIPVISLNANGLEKQPGFKMTPKVLVRFLAGISLGD
                     ALDRMLYRTRPYEVEPGSANKMFRHYLDAGRALMENYSFGAYKKLANEMVRAFDNLPI
                     TNEVKPRVGVVGEILVKFHPGANNNIVDVIEDEGGEAVVPDLTDFILYCCYDDHFAAN
                     TFGRSKVKSFAKQSVAIPLINQFRKPVTDALKKSERFEAPASIESIAEKASQLLSLGN
                     KMGEGWFLTGEMFELLDSNVPNIACLQPFACLPNHITGRGMIKGLKKMYPEANIMSID
                     YDAGSSSVNQLNRIKLMLSIARKQLETTEVITEKETNTRFNPREKILGKAKQVRESAP
                     VEMIGNKVKQARDADPVGAIAQKVKHVASSSSEHVQTDND"
BASE COUNT         2250 a         1243 c         1511 g         2007 t
ORIGIN      
        1 gaggtgttca taatgtcaaa agtactattt attaaagcgt caccacttcc aaatgaagta
       61 tcaagaagtt cgcaagttgc cgaaacgttt atggccgaat ataaagccaa aaatccttct
      121 gatacagtag aagaattagt tttatataat acagaagtac cactattaga tttagaatta
      181 atgacagctg gtagagaatt acaagctggc aaagctttca ctgatttagc gccagatgta
      241 caaaaaaaat taaatgctta taatgcgctt acggaacaat tcttagcagc agacaaatat
      301 gtttttgtgt tcccgctttg gaaccttgga atcccgccat tattaaaagc ttatattgat
      361 acttttgtta ttgctggaaa atctttccgt tatactgagc acggtccaga agcactttta
      421 aaagataaaa aagcaatctt aatccatggt agtggcggta tttattctgc tgggccaaca
      481 agttcattta ctcacggaga accttattta cgtactattt tacaatttat cggtattaat
      541 gttgtaccat caatctttgt agaaggaatt gatcacaatc cgagcaaaga agcggaaatc
      601 gttgcagctg ctaaagcggt agcgcaggaa agtgctgcag aattctaaaa agtttgtgaa
      661 aaaattattt cttgctaatg atattaagac agtattatca actgtctaga ccaataaaaa
      721 cacataaaaa gattgctaat ccctttataa attggtaaag tagagaagta gattgatcga
      781 taaagtgctg aattaactcg gcactttatt ctttttaatt actcgaaagg gatgaatttg
      841 gatggaagag caaaaagaag aattgcaaag agggctgaaa aatagacaca ttcagttaat
      901 cgcgattggc ggagcaattg gtacagggct ttttctagga gcagggaagt caattcattt
      961 agccggacct tctatcatgt tagtttactt aattattggg gctattttat tctttgttat
     1021 gagagctttg ggtgaattat taatacataa cccaacaaca ggatctttta cagaattcgc
     1081 agagcaattt attggaccat gggctggctt tattactggt tggacatatt ggttctgctg
     1141 gattgtgaca ggtattgcag aaattacagc agttggcatg tacgtaaaat tttgggtgcc
     1201 agacttaccg caatggattc cagcacttgc atgtgttttg atacttctat tgtttaactt
     1261 agcaactgtt aaagcttttg gtgaaatcga attttggttt gcgattatta aagtggttgt
     1321 tattattgcc ttaattgtta ttggatttgt actcgtattt attggttaca aacatggcac
     1381 aagtacagct tcattttcta atttagtaga ttatggtggc tttttcccga atggaattgc
     1441 cgggttcttg ctagcattcc aaatggcgac attttctttt gttggaattg agcttgttgg
     1501 ggttactgca ggagaagcgg atgatccaga gcgtacactt ccaaaagcca ttaataatat
     1561 tccgattcgg attttaatct tttatattgg tgcgctactc gtattaatgt cgatttatcc
     1621 gtggagcaat attgatccaa acacaagccc attcgtaagc gtctttacga tgattgggat
     1681 tcctgcagct gccggtatta ttaactttgt ggtgttaacg gctgctatgt cttcttgtaa
     1741 tagtgggatt ttcagtacaa gccggatgct ttatactctt tctgcagaag gaaaagcacc
     1801 gaaaaaaatg catcatttga gctctaatgg tgttccagca acagcgttaa tcacatctac
     1861 agcatgttta cttattggtg tgtttttaaa ttatttctta ccagaacaag tatttatttt
     1921 agtaacaagt atcgcgacga tttgctttat ctgggtttgg ggcgttattt tagtggcgca
     1981 tttacgtttt cgtcataaac atccagaaat cgcagaaaaa agtaaattca aaatgccatt
     2041 atctccttta atgaactggg ttagcttaat tttcttcgga ggattactag ttatcctcgg
     2101 ttttgcagca gatacaagaa tcgcactttt cgtcacacca gtatggttct tgattttagg
     2161 tatcgcttat caagttttaa aagcttccaa ccgaaagaca aaaattcgcc ataattaata
     2221 actgagcaag cattcgctaa acggagctat tttagggaat gcttgctttt tttcggcatg
     2281 aaaatgctcc gcgaaattct ttacaaatga aaaaaatcgt gtagaatgag aggtgtttag
     2341 agcattttgt cgtattttcg catatcgagt gagtactcac tcatttttag aaataactat
     2401 ttatgtgaag caacgtacaa atgacagata atatgtgaag ttacatacat attaagtagt
     2461 gcgtaatgaa agggatgaga aaatgattca tgcagggtta gatgtgggat caacaacagc
     2521 aaaggccgta gcacttaatg accaggggga tattttattt caaacctaca gaagacatta
     2581 ttcagacatt aaaaaagtta cattagaaat catgcaggat atgcaaaaaa aatgtggcat
     2641 gacagaaatg acattcaaaa ttacgggatc atccggatta gcgatttcta aattcttgaa
     2701 tgtacctttt gtgcaggaag taattgcttg tacggaagca gtggagcaag taattccaga
     2761 gacagacgta gtaatcgagc tgggcgggga agatgcgaag attatttatt tcagtggtgg
     2821 gattgagcaa cgaatgaata atgcctgcgc gggtggaact ggtgctttta ttgaccaaat
     2881 cgcgacactg cttcaaacag atccaacagg tttaaacgaa ctggcacaaa atgcgaatac
     2941 gatttatccg attgcttcca gatgtggcgt gttcgccaaa acagatgtgc aaccactact
     3001 taatgaaggg gctagaaaag aagatattgc cgcttcaatt ttccaaagtg tggtgacaca
     3061 aacgattagt gggcttgctt gtggacgtcc aatccgcgga aaagtagcgt ttcttggagg
     3121 accacttact ttccttgatc aattgcgcta tcgttttaca gaaacattga agatgaaaga
     3181 tagtgatatt attgcgcctc aaaacgcgga atattttatt gcacttggaa cagcttttac
     3241 tggattaaat gatgtacctt taaaagtaga tgatatgatt tatcgacttt ccaatatgga
     3301 tatgaccacg atggcgacgg atacggtcat tttaccagca ctttttgaaa agcaagaaga
     3361 cttagaagct tttcgtgcgc gtcataatca aatgaaagcc aaacgagcaa aactggaaga
     3421 ttatgaaggg gatgcttatt taggcattga tgcaggatca actacgacca aattaatctt
     3481 aatgagccaa accaatgaaa ttctttactc gttttattct agtaataatg ggaatccgct
     3541 ccaatcagtt attgacgcaa cgagtgattt atatgaaatt ttaccggaaa aagttcgagt
     3601 tgcgcagtct ggaattacag gctacggcga gtcgcttatt aaagccgcac taaaaattga
     3661 tgttggcgaa attgaaacag tggcgcatta tcgtgctgct cgtgaatttt taccggatgt
     3721 tgattttatt ttagacattg gcggacaaga tatgaaatgt atgaaaatta aaaaaggcgc
     3781 actggatagc ttgatgctta atgaagcttg ctcggccggg tgtggttcgt ttcttgaaac
     3841 gtttgcgcaa acacttaatt tatccattga agagtttgcg gctcgggcgc tggaagcaaa
     3901 agctcctgta gacctaggtt cccgttgtac cgttttcatg aattccaaag tgaaacaagt
     3961 gcaaaaagaa ggcgtgagca tggaagattt atctgcgggt cttgcttatt cagtcgtaaa
     4021 aaacgcgtta caaaaagtaa tcaaactccg cagtccgaaa gacattggtg aaaaagtaat
     4081 cgttcaaggt ggaacttttt acaacgaatc agtcttgcgt gcctttgaac tgttaactgg
     4141 acgtgaagta gttcgaccgg atatagccgg aatgatggga gcatacgggg ccgctttaat
     4201 tgcccgagaa cattacgaaa ctggcgaagt aacggaaatg ctcgtactag aaaaattacg
     4261 tgaatttagc gcggaaactt cgcagtcgcg ctgtaacctt tgtagtaaca catgtcagct
     4321 tacagtgaca agatttggcg atgaccggat gtttgttagt ggaaatcgtt gtgaacgcgg
     4381 ggaacgtgtc gaaacgaagc gtaatttact gcccaattta tatgcgtata aactaaaacg
     4441 tacctttgat tacaaatcgc tgaaaaaatc agaatcaact agagggacca ttggtattcc
     4501 acgcgcattg aacgtttttg aaaattatcc actatggcat acgattttaa cgaacttagg
     4561 tttccgagtg gttttatcat cgaaatcatc caaaaaccta tacgacaaag gtatcgaaac
     4621 gattgcctcc gaagcagttt gtttcccagc caaattaaca cacggtcata ttatggattt
     4681 aatcaagaaa aaagcggatc gcattttcta cccatctgtc gtttacgaaa aaccggaatt
     4741 cggtgaagca acgaataact ttaactgtcc tgttgtggct ggttacccag aagttattcg
     4801 tgtcaatgtg gatgctttgg aagagaaaaa tattccaatg atcagtccgt ttttaacttt
     4861 agataatgaa aaagcattaa tcgaacaaat gagtctcgct ttcccggaag tcccagccgc
     4921 ggatatggaa aaagcagtcc aagcagggct agaggaagca gaactttgcc gcaaagacat
     4981 tcaagcagaa ggagaagcgg cacttactta cattaagaaa aataaaatca aagggattgt
     5041 tcttgcaggg catccatacc atattgatcc agaagtaaac cacggaattc cagaactcat
     5101 tacaatgaac ggcatggcgg ttcttaccga agattcgatt tctcatcttg gagaaatgga
     5161 ccataaactt cgggttgaaa atcagtggaa atatcacgca agactgtatc gtgcagccag
     5221 ctttactgct aaaagtgaag atttagaatt tgtgcaattg acgtcatttg gttgtgggct
     5281 tgatgcaatt acgacggata tgtgccaaga aatcattgaa gggcataaca aagtatacac
     5341 actactaaaa atcgatgaaa ttaacaacct tggtgccgca cgtatccgcg ttcgttcctt
     5401 aaaagcagcc atggaagaac gtgagaaaaa taacgtgaaa ccagggatta tgccgaaacc
     5461 aaaagaacgt ccattattta caaaggaaat gaagaaaacg tatactattt tagcgccaca
     5521 gctagctccg acccattttg aaatgttaga agcagcttgt aaagtgggcg gttataactt
     5581 ggaagtatta ccagcagtta caccacgcgc agtggatgag ggcttacgtt acgtcaataa
     5641 cgacgcttgt tatccagcaa ttttaacgat tggacaaatg atggatgcgc tgaaacacgg
     5701 cgattatgat gtaaataatt tagcggtatt gatgacgcaa acaggtggtg gatgtcgggc
     5761 taccaactat atttcgatgc tgaaaaaagc tctcggagaa gctggcctag atcatatccc
     5821 agttatttcg cttaatgcca acggtttaga aaaacaacca ggctttaaaa tgacgccaaa
     5881 agttcttgtt cgtttcctag ccggaattag cttaggagat gcgctcgacc ggatgcttta
     5941 tcgtactaga ccatatgaag tggaaccagg gagcgcgaat aaaatgttcc gtcattatct
     6001 cgatgctggt cgtgcgttaa tggaaaatta ctcttttgga gcatataaaa aattagcaaa
     6061 tgaaatggtt cgcgcctttg acaacttacc aataacaaat gaagtgaagc ctagagttgg
     6121 tgtcgttgga gaaattctcg tgaaattcca tccgggtgct aataacaata ttgttgatgt
     6181 tattgaagac gagggcggag aagcggttgt tcccgattta acagatttca ttttatattg
     6241 ttgttatgac gatcactttg cagccaatac atttggtcgt tccaaagtaa aatcattcgc
     6301 gaaacaaagc gttgcgattc cacttattaa tcaattccgc aaaccagtaa ctgatgcgct
     6361 gaagaaaagt gaacgctttg aagcaccggc gagtatcgaa tctatcgctg aaaaagcgag
     6421 tcaattacta tcactcggaa ataaaatggg tgagggctgg ttcttaacag gggaaatgtt
     6481 tgaattactc gatagtaacg taccaaatat cgcgtgttta caaccatttg cttgcttgcc
     6541 aaaccatatt actggtcgag gcatgattaa agggcttaaa aaaatgtatc cagaagctaa
     6601 catcatgtcc attgactacg atgccggctc aagctctgtg aaccaactaa atcgaatcaa
     6661 attaatgctc tccatcgcaa gaaaacaact agaaacgaca gaagtaatca ccgagaaaga
     6721 aacaaacaca cgattcaacc caagagaaaa aatccttggt aaagcaaaac aagtacgaga
     6781 aagcgcccca gtcgaaatga ttggaaacaa agtaaaacaa gcgcgggatg cagacccagt
     6841 tggcgcgata gctcagaaag tgaaacatgt tgcatcatca agtagcgagc acgtccaaac
     6901 ggataatgat taatgtaaag ccacctataa aataggtggc ttttttagat aaaattcaca
     6961 aaaatgacac gaaatagaac tatatccgca ataatagtat ttttgttaat a
//
LOCUS       DASDYO010000136         6965 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.136, whole genome shotgun sequence.
ACCESSION   DASDYO010000136 DASDYO010000000
VERSION     DASDYO010000136.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6965)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6965)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6965
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.136"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..3567
                     /locus_tag="U0290_002584"
     CDS             <1..3567
                     /locus_tag="U0290_002584"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463863.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2302616.1"
                     /translation="ETFYAQNNLITNIGTMDNLPELTYVDLSFNRIPSLAPIGDLPKL
                     EILKVTDNYSYLRSLGTMDGVSKLRNLELQNNYLNYTGTEGNLSALSDLTNLTELNLR
                     DNGYISDISGLSTLSRLIYLNLDSNKIKDISALSNLTTLQELTLENNQIEDISALSDL
                     DNLNKLALSKNKIIDISPAANMVNRGASVTASNQTYTLPTVLSYQSSFTIDNPVVWYD
                     GTPLAPSSIAHSGTYKDGEITWTNMTAASSSTEFNFNRLKDGLTFSGTITQPYKSAVK
                     VTANAEQTYTIGDTISEEQFLKDVNAKSSDGAPVTSDFATVVDLNTFGEYEVTLTSEK
                     DGIQGDSCKVIVKVLHGAPVISADQTINYDKHATITEKQFLEDVHASTDLNTAITTNF
                     STAVNLNKGGDYTVALNSENEDGVKAETVYVTVTVDKDPAPIISAKTDITYDKFSKKT
                     EAAFLDDIDADTNDGSIITSNFATAVNLDKAGDYTVTLNSINSDGVASTPTAIIVHVE
                     KEKIATISANTAQQYEKYAEINETQFLKDVHASINASPTTAVLESDFETVVKLDVPGT
                     YTVTITATNEDGGVSAPKEVSVIVKKLPAPEITADKEITYPKFDEVSEAEFLSDIHAT
                     INEKNVTITSNFSADVNLNKAGDYTVTLNATNEDGVKATPVEVIVHVQQGERPVITAD
                     ATISYDKFANITEAKFLEDIHATSSDGQSSTVITSNFETATNFKTAMSYTVTLNAVNE
                     DGISAEPVAVTVTINKEPAATLKADAEVSYAKNEAVTESDFFKDVHLEGAEAPSTAKA
                     TSNFDSVVDRSKTGDYTVTINATNEDGAVSTPIEVIVHIGAESAPVITANAEVKYNKH
                     EQTDERRFLYDSDAKIDEANVEIKTDFAEKVDINKVGTYTVTLTATNEDGQAANPVEV
                     SVIVSDAAAEKVNVKYVDENGAEISAAETLTGNLDDAFSIDAKSIAGYKCDATLSGVF
                     STVEQTVVFHYKAIEPGVVTIKYEDANGKAVAEDKQITGEVGDDFEAEAQTVSGYSCR
                     AIASGKITEEPQTITFTYTTATPSKKSGEITVQYVDESGKKLADSKKVTGDIDDSYSV
                     EAKAIDGYSVVGDDSAKGVFTEKSQTVTFKYKKNTQVSKDEPKVKGKTNQPPSADTKL
                     KVDNNTLPATGDTENMALAVLIGFNMLLVASIFLFRKPKTNQ"
     gene            3791..4315
                     /locus_tag="U0290_002585"
     CDS             3791..4315
                     /locus_tag="U0290_002585"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463864.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-directed RNA polymerase I"
                     /protein_id="HEM2302617.1"
                     /translation="MNKMIIYSSQYGTSKKYATELSQKKAIPMYSVESIPESIVEADE
                     IIYVGAIYMGKVLGFDKFSKNYKTLSSKLIVISAGMYDPTRKENTDNIELTVKENLQK
                     TNFLLKDIFCLKGRLDTQQLRLKHKMLVNALYKSAKRKKESDLNDNERDIVRAYEDDS
                     QIDLNKLDGILDRV"
     gene            4528..4812
                     /locus_tag="U0290_002586"
     CDS             4528..4812
                     /locus_tag="U0290_002586"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3130 domain-containing protein"
                     /protein_id="HEM2302618.1"
                     /translation="MREIKVSEVTFQQHATKLASKSSGRYLPLKNGNMAYSRANSIDQ
                     LRSALIDLVGVVEDFQHVTKQDAGRLKKMGIAYAKQDQVMGQKINQLEVR"
     gene            4813..5181
                     /locus_tag="U0290_002587"
     CDS             4813..5181
                     /locus_tag="U0290_002587"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease P"
                     /protein_id="HEM2302619.1"
                     /translation="MDSAHRQLEQQLQQIKKAKIMAETDVDQTRRKQNEQDWLEEDSH
                     QLTQEKLVLLDFLRSGWQGEEASGFHRFLEEQQHEESQAWRRDLQDKRSDLDTELQEN
                     KARLHTLETKQATLQKEWSK"
     gene            5178..6614
                     /locus_tag="U0290_002588"
     CDS             5178..6614
                     /locus_tag="U0290_002588"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009928199.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LXG domain-containing protein"
                     /protein_id="HEM2302620.1"
                     /translation="MSRIDIAELNDFLHGLRSSNAEAKAMIRKIKEAAMDYAQDNRLK
                     GEAVSTSKRYFSSTYTSICQSIIEALDESEERLAQYIREFGSQVDSSPSARIDAEILQ
                     EAMAKVSQLQRKEEDLHRQLTAPNTKPDMQQVYAVKSRSVHTQLLKAIEKENILERYL
                     AFEQSHGQFFSALDELIRATGRAVQELLHHVTFNDKTGTYSVPKSAVNSLLLMKKALD
                     NARTENDQDPFPKAFEDYTVLAYTYVNDQGETVTMWLLEKDGKRVENKELQDFLEKHG
                     QELDPLLYTNLSGEELERKVNDSWKEGINYLNGQKVSGFSGATLRSSAYVASMKDWTD
                     DAGLTDMALGLGFGIAAARNKAIIPKKSSGLKFDDIEKLENHFTKHGGEFKGAYSNIN
                     EYLKGANNVIKNGEKVQYNYTLKDGTTELRTGYVKFMGNTSKGKAKFEFVGTNLSGDI
                     TTYHVKRGEDVYKLLNGNKHINVINPIE"
     gene            6626..>6965
                     /locus_tag="U0290_002589"
     CDS             6626..>6965
                     /locus_tag="U0290_002589"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012951179.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302621.1"
                     /translation="MRYEAKIISENPNIEEELKIKIKDIELLCFVEEYKCSVEVGQEY
                     IVELETVVFDDLDIEKSTLQAKEITQVADSFAYFIRGVFHPSSKKIDSGIEIDLADED
                     ISDFWYLENQF"
BASE COUNT         2571 a         1097 c         1460 g         1837 t
ORIGIN      
        1 gagacgtttt atgcgcaaaa taatttgatt accaatattg gtacgatgga taatttacca
       61 gaattaactt atgtagattt atctttcaac agaataccat cacttgctcc aattggcgac
      121 ttacccaagt tagaaatatt aaaagttaca gacaattatt cttatttaag aagcctagga
      181 acgatggacg gtgtttctaa gctgagaaat ttagaattac aaaacaatta ccttaattac
      241 actggaacag aagggaactt aagtgcatta agtgatctaa caaatctaac ggaattaaat
      301 ttgcgagata atggttatat tagtgatata agtgggcttt ccaccctatc aagactaatc
      361 tacttaaatt tagattccaa taaaattaaa gatatttctg ccttatctaa tttgacgact
      421 cttcaagaat taacacttga aaacaaccag attgaagata tttcagcact tagtgatctg
      481 gataatttaa acaagctagc tctatcaaaa aataaaatta ttgatattag tcctgccgct
      541 aatatggtta atcggggggc gagtgttact gcgagtaatc aaacatatac attgccaact
      601 gtattatcat atcaaagctc atttaccata gataatccgg ttgtttggta tgacggcaca
      661 ccactagcgc catcatctat agcgcactct ggtacttaca aggatgggga aataacttgg
      721 actaacatga ccgcagcctc cagttccact gaatttaact ttaataggct aaaagatggt
      781 ttaaccttct caggaacaat cacccaacct tataaatctg cagttaaagt aactgcaaat
      841 gcagagcaaa cttatacaat tggtgatact atttcagagg agcagttttt aaaagatgtt
      901 aatgcaaaat catcagacgg tgcacctgtt acaagtgatt ttgctacagt ggtggattta
      961 aacacttttg gtgaatatga agttactcta acttctgaaa aagatggaat ccaaggggat
     1021 agttgcaaag taattgtcaa agttcttcac ggagcgcctg tcatttcggc agaccaaaca
     1081 attaattatg ataaacatgc gactattaca gagaaacaat ttttagaaga tgttcatgcg
     1141 agtacggatt taaatacagc tattacaact aattttagta cagcagttaa cttgaataaa
     1201 ggcggagatt ataccgttgc gctaaattct gaaaatgagg acggcgtgaa agctgaaacg
     1261 gtctatgtca ctgttactgt agacaaagat ccggcgccga ttataagtgc gaaaactgac
     1321 atcacttatg acaaattctc taaaaaaacc gaagcagctt tcttagatga tatagacgca
     1381 gatacaaatg atggctctat aataacttct aactttgcta cagcagttaa tttagataaa
     1441 gcaggtgatt atactgttac tctgaattct attaatagtg atggtgtagc gtctacgcca
     1501 actgcaatta ttgtccatgt ggagaaagag aaaatagcaa cgattagcgc aaatacggca
     1561 caacaatatg aaaaatatgc ggagattaat gaaacgcaat ttctaaaaga tgttcatgct
     1621 agtattaacg cgagcccaac aaccgcagtt ttggaaagtg attttgaaac agtagttaaa
     1681 ctagacgtcc caggaacgta cacagtaacg attactgcta caaatgaaga tggcggagta
     1741 tcggcaccaa aagaagtttc tgtcatagta aaaaaacttc cagcgccaga aatcactgct
     1801 gataaggaaa taacctatcc gaaatttgat gaagtaagtg aagcagaatt tttaagtgat
     1861 attcatgcaa ctattaatga aaaaaatgta acgattacaa gtaacttcag tgccgatgtg
     1921 aatttaaata aagctggcga ttacacggta acattaaatg ctacgaatga agacggcgta
     1981 aaggctacac cggttgaagt aattgtacat gttcaacaag gagaacgtcc tgttataaca
     2041 gccgatgcaa ctatttccta tgacaagttc gctaacataa cggaagcgaa gttcttagaa
     2101 gatattcatg caacaagtag tgatggtcaa agctcaactg taatcacctc taatttcgag
     2161 accgcgacaa acttcaaaac agccatgagc tacacagtta cgcttaatgc tgtaaatgaa
     2221 gacggcatta gcgcagaacc agtagcagtg accgttacaa taaataaaga accagccgcg
     2281 acgttaaaag ctgatgcaga agtaagctat gcgaaaaatg aagctgtaac cgaatctgat
     2341 ttcttcaaag atgttcattt agaaggagcg gaagccccaa gtacagcaaa agcaacaagt
     2401 aattttgatt ccgtagtaga tagaagtaaa acaggagatt atactgttac gataaatgct
     2461 acaaacgaag atggggctgt ctctacacca attgaagtaa ttgttcacat tggagcagaa
     2521 agtgcaccag taattacagc gaatgcagaa gtaaaatata acaaacatga acaaacagat
     2581 gaaagaagat ttttatatga tagtgatgca aaaatcgatg aagctaacgt ggaaattaaa
     2641 accgattttg cagaaaaagt agatattaat aaagttggaa cttatacggt cacactgact
     2701 gctacgaatg aagatggcca agctgccaat ccagtagaag taagcgtcat tgtaagtgat
     2761 gctgctgctg aaaaagtaaa tgtgaaatat gtagatgaaa atggagcaga aattagtgca
     2821 gcggagacct taactggtaa tctagatgat gcattttcta ttgacgcgaa atctatagct
     2881 ggatacaaat gtgatgccac tttaagcggc gtattttcaa cagttgagca gacagttgtg
     2941 tttcattata aagcaatcga gcctggtgtt gtaacgatta aatacgaaga tgcaaatgga
     3001 aaagcagttg ccgaagataa acaaataact ggcgaagtag gagatgattt tgaagctgag
     3061 gcgcaaacgg tgagtggtta ttcatgccga gcaattgcaa gtggtaagat aacagaagaa
     3121 ccgcaaacta ttactttcac atacactaca gcaacgcctt ccaaaaaatc aggcgaaata
     3181 acagttcagt atgtagatga gtcaggtaag aaattggctg attctaaaaa ggttacaggg
     3241 gatattgatg atagttatag tgtagaagcc aaggcaattg atggctatag cgtagttggc
     3301 gatgattctg ctaaaggtgt ttttaccgaa aaatcgcaaa cagttacttt taaatacaag
     3361 aaaaatacac aagttagtaa agatgagcct aaagttaaag ggaaaacaaa ccaaccacca
     3421 agtgctgata cgaagctaaa agtagacaat aatacgttgc ctgccaccgg agatactgaa
     3481 aatatggcat tagcagtttt aatcggtttt aatatgctac tcgttgctag tatattcctt
     3541 tttagaaaac caaaaacgaa ccaataaatg gataatcttt aaataataga agccttatag
     3601 aattcattaa ataatgatat tttataaggc ttttattact tattgaacca aatctaacag
     3661 gaagtaatga tgaaaagctt ccttctaatt tctaatgtga actataaaac gttcatgaaa
     3721 tgcacacaaa caatttgttt ttgaatgtta taataatatg gaagcttata aagaagggag
     3781 caggaagatg atgaataaaa tgattattta ttcaagtcaa tacggcacca gtaagaaata
     3841 tgcaacagag cttagtcaga agaaagctat tccaatgtat tctgtggaat ctattcctga
     3901 atcaatcgtt gaagccgatg aaatcattta tgttggtgcg atctatatgg gaaaagtact
     3961 cggatttgat aagttttcta aaaattataa aactttgtca agtaaattaa tcgttatttc
     4021 agctggaatg tatgatccaa cacgcaagga aaatacggat aacatcgaat taacggtcaa
     4081 agaaaacctt caaaaaacta attttttatt aaaagacata ttttgtttaa aagggagact
     4141 agatacacag caactccgct tgaaacataa aatgttagtc aatgctttat ataagagtgc
     4201 aaaaagaaaa aaagagagtg acttaaatga taatgaaaga gatatagtgc gtgcttatga
     4261 agacgattcg cagattgatt tgaataagtt agatggtatt ttagatagag tgtagctgac
     4321 aaccaaaaga aaatagccca aaagcctgtc tttaaagaga ggctttttgg tattgactta
     4381 gttagaagat gaaatgttaa ttttttcact taaaaagctg attttaagct gtttttcaat
     4441 gaattgtttc acagaatgct cacaaaagag gtgtgctacc ggtgctataa tgagggggaa
     4501 ggatttacat agagaggaag catgcagatg agagaaataa aagttagcga agtaaccttc
     4561 caacaacacg caaccaaatt ggcaagtaaa agttcgggaa gatacttacc attaaaaaac
     4621 gggaacatgg cttattccag agccaattca attgatcaat tgcggtcggc attgattgat
     4681 ttggtaggcg tagtggagga ttttcaacac gtgaccaagc aagatgcggg ccgattaaag
     4741 aaaatgggta ttgcctatgc caagcaagac caggtcatgg gacaaaaaat caatcagttg
     4801 gaggtgcgtt aattggatag cgcacaccgc caactagaac aacaactcca acaaattaaa
     4861 aaagcgaaaa taatggcaga aacggatgtc gatcaaacga gaagaaaaca aaatgaacaa
     4921 gattggttag aagaggacag ccaccaatta acacaagaaa aactggtgtt attagacttt
     4981 ttacgcagtg gctggcaagg tgaagaagcc agtggttttc atcgtttttt agaagagcag
     5041 caacacgaag aatctcaggc ttggaggcgt gatcttcagg ataaaagaag cgatttagac
     5101 acggaattac aagaaaataa ggccaggctc cacacgttag aaaccaaaca agccacctta
     5161 caaaaggagt ggagcaagtg agccggatag atattgcgga attgaatgac tttctccacg
     5221 gtttgcgaag tagtaatgcg gaagccaaag cgatgattag aaaaattaaa gaagcagcga
     5281 tggattacgc ccaggacaat cgtttaaaag gggaagcagt tagtacctcc aaacggtatt
     5341 tttctagtac ctatacaagt atttgccaga gcatcattga ggcactggat gaaagcgaag
     5401 agcgactagc gcaatatatt cgcgagttcg ggagccaagt ggatagttcg ccttctgcca
     5461 gaattgatgc agaaatctta caagaagcga tggccaaggt tagccagtta cagcgaaaag
     5521 aagaagactt gcatcgacaa ttgacggcgc cgaacacgaa gccggatatg caacaagtct
     5581 atgcagtgaa atcaagaagt gttcatacac aattattgaa ggcaatcgaa aaagagaaca
     5641 tcctagaaag atatttagct tttgaacaaa gtcatggcca gttttttagt gcgttagacg
     5701 aactcattcg agcaaccgga cgtgcggtgc aagaattgct acatcatgtg acttttaacg
     5761 ataaaacagg gacttattcc gtgccgaaaa gtgcggtaaa cagcttgttg cttatgaaaa
     5821 aagcgctgga taacgcacga acagaaaatg accaagaccc ctttccgaaa gcttttgaag
     5881 attacaccgt gttagcttat acttatgtca atgatcaagg cgaaaccgtg acgatgtggt
     5941 tacttgaaaa agatggaaaa cgagtagaaa acaaggaatt acaagatttc ttagaaaaac
     6001 atggtcagga attagaccca cttctttata ccaacctttc tggagaagaa ctcgaacgaa
     6061 aagtgaatga ttcttggaaa gagggtatca actatttaaa tggtcaaaaa gtatctggat
     6121 tttctggagc cacactgcgg tcatccgctt atgtggctag tatgaaagat tggacagatg
     6181 atgctgggtt gacagatatg gcattaggtt tagggtttgg gattgcagca gctagaaata
     6241 aagcgataat acctaagaaa tccagtggac ttaaatttga cgatatagaa aaattggaaa
     6301 accattttac aaaacatgga ggggagttta aaggtgcata ttcgaatata aatgaatatc
     6361 taaaaggggc gaataatgta attaagaatg gtgaaaaagt acaatataat tatacattga
     6421 aggatggaac aaccgagttg agaactggct atgtgaagtt tatggggaac actagtaaag
     6481 gaaaagcaaa atttgaattt gttggtacta acttatctgg agatattacg acctaccatg
     6541 tgaaacgcgg cgaggatgta tataaattat tgaatggaaa caagcatata aatgtgataa
     6601 atccaataga ataggagaat aataaatgag atatgaagca aaaataattt cagaaaatcc
     6661 taatattgaa gaagagttga aaattaaaat aaaagatatt gaacttttat gttttgttga
     6721 agaatacaaa tgttcagtag aggttggcca agaatatatt gttgagttag agacggtcgt
     6781 tttcgatgat ttagatattg agaaaagtac tttacaagct aaggaaataa ctcaagtagc
     6841 agatagtttt gcatacttta tcagaggcgt ttttcatcct tctagtaaga aaatagattc
     6901 agggatagag attgatttag cagatgagga tatttctgat ttttggtatt tggaaaatca
     6961 atttg
//
LOCUS       DASDYO010000137         6857 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.137, whole genome shotgun sequence.
ACCESSION   DASDYO010000137 DASDYO010000000
VERSION     DASDYO010000137.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6857
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.137"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(13..771)
                     /locus_tag="U0290_002590"
     CDS             complement(13..771)
                     /locus_tag="U0290_002590"
                     /EC_number="4.2.1.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type I 3-dehydroquinate dehydratase"
                     /protein_id="HEM2302622.1"
                     /translation="MNKVVVKNVTFGEGAPKICVPMVGKTVAALKEEAEMLQTIDLDV
                     VEWRVDFFEDVKDLAKVEAALDEIRTILPETPILFTFRSAKEGGELAVGDEFYFELNE
                     TLASTGKIDLVDVELFNEEADVLRLIETAHKNNVKVVMSNHDFDKTPAKEEIVSRLTR
                     MEALGADLPKIAVMPKSAGDVLTLLDATNTVSEKANQPIITMSMAGTGVISRLAGEVF
                     GSAMTFGAAKKASAPGQIDVNELRHVLDLLHKQF"
     gene            complement(837..1712)
                     /locus_tag="U0290_002591"
     CDS             complement(837..1712)
                     /locus_tag="U0290_002591"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEM2302623.1"
                     /translation="MTNKITERITGHTELIGLIATPIRHSLSPTMHNEAFAKLGLDYV
                     YLAFEVGDKELKDVVQGFRAMNLRGWNVSMPNKTNIHKYLDKLSPAAELVGAVNTVVN
                     DDGVLTGHITDGTGYMRALKEAGHDIIGKKMTICGAGGAATAICIQAALDGVKEISIF
                     NRKDDFYANAEKTVEKINSKTDCKAQLFDIEDHEQLRKEIAESVIFTNATGVGMKPFE
                     GETLLPSADMLRPELIVSDVVYKPTKTRLLEIAEEQGCQTLNGLGMMLWQGAKAFEIW
                     THKEMPVDYIKEILF"
     gene            complement(1812..3806)
                     /locus_tag="U0290_002592"
     CDS             complement(1812..3806)
                     /locus_tag="U0290_002592"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEM2302624.1"
                     /translation="MTDYPSIFEPLTVKRMTIKNRVIMPPMGTNLAGLNGEFLEEHMN
                     YYEQRAKGGTGLITIENACVDFPYGTNGTTQLRIDNDQYIPGFYKLTERLHKHGTCVS
                     IQINHAGASAYPARLNGLQPVSASDIPSKKGGTVPRPLTVEEIYEIVNKYGDAARRAQ
                     QAGFDAVEIHGGHSYLLCQFLSPLYNKRTDEFGGSPENRARIVKLILEKVRAEVGPFF
                     PIVLRFSADEFTEGGNHLEDILELLDYCQEEADILNVSAAINDNLYLQIDQMNLEDGW
                     RSYLAKAVKDKFNKPTITSGNIRSPKAAEKILSEGYADLLAMGRGLIAEPNWVNKVAT
                     GQEDMLRKCISCNIGCADHRISKSKPIRCTVNPDIIHEDKYKETKVTRPTNVVVIGGG
                     TAGLEAACTAAEVGCNTTLIEASEQTGGLARAIANLPDKSRIADFPNYLANRAEKLTN
                     LKVITGTKADTALIDTFNPDVVVNATGSKPLLPPIKGLHDVIDKEGSKVHSIFGLISN
                     IDDFTEFSNKKVAVIGGGAVGLDVVEYFSERGSDVTIVEMMPLLGKDLDMITRLSMMD
                     IIEKNNVDVQTETALTEVAADHFKVKHDGVDAEIPFDYGFVCLGMRPERPLMEELAAY
                     GKEKQIEIVNIGDSAATRKILEGVREGRNILTTLEKIGSL"
     gene            4004..4897
                     /locus_tag="U0290_002593"
     CDS             4004..4897
                     /locus_tag="U0290_002593"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2302625.1"
                     /translation="MNLRQLYYFKKLAEKEHYTIAAAELSITQPSLSHSIAELERELG
                     VYLFEKQGRNIRLTKYGRFYLTYVEKSLAELEKGEKLLHELTSPSHGNIDLGFIYTMG
                     AHTVPELVQNFTKVESHKDITFSFFQGATKSIIPDLKNEKFDLAICSYVENEPDIEFL
                     PLTKQELVVVVAENHPLAKHDSIDLKDTADYSYIFFSDTSGLRPLIDSLFAEINIQPK
                     IGCYVEEDTAMVGLVSVDYGISIMPKISSLAHYNVKVLSINEPKHDRFIYLASLKNHY
                     ISPASKAFKDFALRYGKKHFL"
     gene            complement(4934..5662)
                     /locus_tag="U0290_002594"
     CDS             complement(4934..5662)
                     /locus_tag="U0290_002594"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX hydrolase"
                     /protein_id="HEM2302626.1"
                     /translation="MTEEFVNKEDALKNYNAKEFRTPDGYTSDMILTTVKELNGKPTL
                     HILLIKRSLTNAEGKPNMEGGKWAVPGGFVDENESADQAAARELEEETSLTGIPLIPF
                     GVFDKPGRDPRGWIISRAFYAIVPPEALEKRAAGDDAADIGLFSMTEALELPLAFDHL
                     DMLKKAYSAITEEFLLTTAIRDFLPETFSAELLYQTLDGCTKPGILPDEVEFMENIEY
                     LPYLEKVGELYRFNADAEAGSIYF"
     gene            complement(5754..5924)
                     /gene="rpmF"
                     /locus_tag="U0290_002595"
     CDS             complement(5754..5924)
                     /gene="rpmF"
                     /locus_tag="U0290_002595"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="50S ribosomal protein L32"
                     /protein_id="HEM2302627.1"
                     /translation="MAVPARRTSKAKKNKRRTHKGLTTPGLSRDSETGEYRMSHRISP
                     DGTYKGRTILEK"
     gene            complement(5989..6564)
                     /locus_tag="U0290_002596"
     CDS             complement(5989..6564)
                     /locus_tag="U0290_002596"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nitroreductase family protein"
                     /protein_id="HEM2302628.1"
                     /translation="MIEKTIKERRSIKKANDAPISRETVNTILEQAAYAPFHSKVEPW
                     NVYVLHTLAEKERYIEKIIEFNEREQGVSFSEAEIADLKAGYAKKIITPPYLLIVTTN
                     IIGHGKKDFESIGATSAFIQNIQLLGWEAGIGMIWRSNRFIFDAKFAEDLGIPSEQKI
                     VGTLHLTSLAEVPEAKPRRPLNEWVKNLADL"
BASE COUNT         1871 a         1499 c         1224 g         2263 t
ORIGIN      
        1 ttttagtatt tattaaaatt gtttatgcag taaatcaaga acgtgacgta actcattaac
       61 atcaatttgc ccaggagccg atgctttttt cgcagcgcca aatgtcattg cagagccaaa
      121 tacttcgcca gcaagacggc tgatgacacc agttccagcc attgacatcg taatgattgg
      181 ttgattagct ttttcagata cagtattcgt tgcatctagt aaagttagta cgtctccagc
      241 agattttggc atgacggcga ttttcggaag gtccgcgcca agtgcttcca tgcgagttaa
      301 tcgagaaacg atttcttcct tcgcaggtgt tttatcaaaa tcatgattcg acataactac
      361 ttttacattg tttttgtggg ctgtttcgat taaacgtaaa acatccgctt cttcattgaa
      421 aagttccacg tcaactaaat caattttgcc agtgctagct agtgtttcat ttaattcaaa
      481 ataaaattcg tcaccgacag ctaactcgcc gccctctttt gcactgcgga aagtgaataa
      541 aatcggtgtt tctggtaaaa ttgtgcgaat ttcatctagc gcagcttcca ctttagctaa
      601 atctttgacg tcttcaaaaa agtcaacgcg ccattcgaca acgtccaaat cgattgtttg
      661 taacatttct gcttcttctt taagcgcagc aaccgtttta ccgaccattg gtacacaaat
      721 ttttggcgca ccttcaccaa acgtaacatt ctttacgact actttattca tgtataattc
      781 tcctcattcg atattatgtc ttaagattag cgataacctt gttcttttgc aagtttttaa
      841 aataggattt ctttaatgta atcaactggc atttctttgt gtgtccaaat ttcgaaagct
      901 ttcgcacctt gccaaagcat catgcctaag ccgttaagtg tttgacagcc ttgttcttca
      961 gcgatttcaa gcaatctagt tttagttggt ttgtagacaa catccgaaac gattaattct
     1021 ggacgaagca tatcggcact tggtaaaagt gtttcgcctt cgaaaggttt catcccaacg
     1081 ccagtcgcgt tcgtgaaaat aacactttct gcgatttctt tacgtaattg ttcgtggtct
     1141 tcgatatcaa ataattgtgc tttacaatct gttttcgaat tgattttttc tactgttttt
     1201 tctgcattcg cgtaaaaatc gtcttttctg ttgaaaatag aaatttcttt tacgccgtca
     1261 agagcagctt ggatacaaat agctgttgcc gcaccaccag cgccgcaaat cgtcattttt
     1321 ttgccgataa tatcatgtcc agcttctttt aacgcacgca tataaccagt gccgtctgta
     1381 atgtgtccag ttaacacgcc gtcatcatta acaactgtat ttactgcccc tacaagttca
     1441 gctgctggag aaagtttatc taaatattta tggatatttg ttttatttgg catggaaacg
     1501 ttccagccgc gtaagttcat tgcgcggaat ccttgtacaa catctttcag ttctttgtct
     1561 ccaacttcaa aagcaaggta tacataatca agcccgagtt ttgcaaaagc ttcattatgc
     1621 attgttggtg ataaactgtg tctgattgga gtggcgatta aaccgattaa ttctgtgtgt
     1681 cctgtaattc tttctgtgat tttgtttgtc ataataacat cgttcctttc caaattaagg
     1741 tttatttgtg aaaatgtgaa cttatataaa gagcgaatgt ggcaagacgg actccgcctt
     1801 gccagttcgg attacaaaga gccaattttt tctaatgtag ttaaaatatt tcttccttcg
     1861 cgaacgcctt ccaagatttt tcttgtcgca gcgctgtcgc caatatttac gatttcaatt
     1921 tgtttttctt ttccgtatgc cgcaagttct tccataagtg ggcgttctgg tcgcattcct
     1981 aggcagacaa agccgtaatc aaatggaatc tcggcgtcta ctccgtcgtg cttcactttg
     2041 aaatgatccg ctgctacttc ggttaatgca gtttctgttt gcacatcaac attattcttc
     2101 tcgataatgt ccatcatcga aagacgtgta atcatatcta agtcttttcc aagaagtggc
     2161 atcatttcta caattgtaac atccgagccg cgttctgaga agtactcgac cacatcaagt
     2221 ccaactgcac caccgccgat aactgcaact tttttgttac taaattcggt aaagtcatcg
     2281 atatttgaaa taagtccaaa aatcgaatga accttactgc cttctttgtc aatcacgtca
     2341 tgcaaacctt taatcggtgg aagtaatggt ttggatcctg tggcattgac taccacatca
     2401 ggattaaatg tatcaataag cgcagtatca gctttagtgc ctgtaataac ttttaaattg
     2461 gttaattttt ctgctcggtt cgctaaataa ttagggaaat cggcaattct acttttgtct
     2521 ggaaggttgg caatggcacg cgccaagcca ccagtttgtt cactcgcttc aattagcgtt
     2581 gtgttacagc caacttcagc cgccgtacaa gctgcttcaa gccctgctgt tccgccgcca
     2641 attacgacaa cattggtcgg acgagtcact tttgtttctt tgtatttatc ttcatgaata
     2701 atatcaggat tcaccgtaca acggattggc ttcgacttgg aaattcggtg atccgcgcaa
     2761 ccgatattac aagaaataca ttttcgaagc atgtcttctt ggccagttgc cactttgttc
     2821 acccagttag gctcagcgat taagccacgt cccatcgcaa gcaagtccgc atatccttct
     2881 gacaaaattt tctctgccgc ttttggactg cgaatgttac cggaagtaat cgttggtttg
     2941 ttaaatttat ctttcaccgc ttttgcaagg tagcttctcc agccatcttc caagttcatt
     3001 tggtcaattt gcaagtatag gttgtcattt attgccgctg atacattcaa aatatccgct
     3061 tcttcttggc aataatctag cagttccaaa atatcttcta agtggttgcc gccttctgta
     3121 aattcatctg cactaaaacg aagtacgatt gggaaaaatg gaccaacttc cgcgcggact
     3181 ttttccaaaa ttagtttgac gatacgggcg cgattttcag gcgagccacc aaattcatcc
     3241 gtacgtttgt tataaagtgg cgataagaat tggcatagta agtacgagtg tccgccgtgg
     3301 atttcgactg catcaaaccc agcttgttgg gcacgtctag ctgcatcacc atatttattg
     3361 acgatttcat aaatttcttc taccgtaagc gggcgcggta cagtaccacc ttttttagat
     3421 ggaatatctg acgcggaaac tggttgaagt ccattcaaac gtgctggata agctgatgca
     3481 ccagcgtggt tgatttggat ggatacacaa gttccatgtt tatgaagacg ttctgttaat
     3541 ttgtaaaatc cagggatgta ttggtcatta tcgattcgaa gttgcgttgt tccgtttgtc
     3601 ccataaggaa aatctacaca agcgttttca atagtgatta gacctgttcc accttttgcg
     3661 cgttgttcgt agtaattcat atgttcttct aaaaattcgc catttaatcc agctaggttt
     3721 gtccccattg gtggcattat cacacggttt ttaatggtca ttctttttac agttaatggt
     3781 tcaaaaatac tcggataatc tgtcataata agcctcctgc gactataatc tcagcaaatg
     3841 atttgttaca ttattcacgt tcaataatgc acaatcttat ttctctttca ttataagtca
     3901 ggaataatta ttaatctaat gtatattttt cgatttatcc atagattttt tctatacaat
     3961 cgcttacaat agagttatca aggcattccg aggaggtagt ttcatgaatt tgcgtcaatt
     4021 atactatttt aaaaaactag ctgaaaaaga gcattacacg atcgcagccg ccgaactctc
     4081 cattacccag cctagcttaa gccattctat cgcagaactt gagcgagaac ttggtgtcta
     4141 tttatttgaa aaacaaggcc gcaatattcg tttaactaaa tacggtcgct tttatttaac
     4201 ttatgtggaa aaatccctcg ccgaactaga aaaaggtgaa aaacttttac acgaattaac
     4261 gagcccatcg cacggaaata ttgatttagg gtttatttac accatgggcg cccatacggt
     4321 tccagagctc gtccagaatt tcaccaaagt cgaaagccat aaagacatca cattttcctt
     4381 tttccaaggt gccactaaat caattatccc tgatttaaaa aatgaaaaat tcgacctagc
     4441 gatttgctcc tacgtcgaaa atgaacctga tattgagttt ttaccattaa caaaacaaga
     4501 gttagttgtt gtcgttgccg aaaaccaccc acttgccaaa catgattcga ttgatttaaa
     4561 agacaccgca gattattcgt atattttctt ttctgacacc agtgggctga gaccgcttat
     4621 tgattctctt tttgcggaaa taaatattca acctaaaatc ggctgttatg tagaggagga
     4681 taccgcaatg gttgggcttg tgagtgttga ttacggtatt tctatcatgc caaaaatctc
     4741 ctcattagca cactacaatg tcaaagtatt atccatcaac gaaccaaaac acgatcgttt
     4801 tatctatcta gcaagtttga aaaaccacta catttcgcct gcttccaagg cttttaaaga
     4861 tttcgcatta cgttatggta aaaagcattt cctataaaaa aaggagccaa ccaaatcggt
     4921 ggctcctttt ctattaaaaa taaatacttc ctgcttcagc atccgcatta aatcggtata
     4981 actcaccaac tttttctaaa taaggtaaat actcgatatt ctccataaat tctacttcat
     5041 ccggcaaaat acctggcttc gtgcaaccat ctaacgtttg gtaaagtagt tcggctgaga
     5101 aagtttctgg caagaaatca cgaattgctg ttgtcagtaa aaactcttcc gtaatcgcac
     5161 tatacgcttt tttaagcata tctaaatggt caaaagcaag tggcagttcc aaagcttctg
     5221 tcattgagaa taggccgata tccgccgcgt catccccagc cgcgcgtttc tctaaagctt
     5281 ctggtggcac aatcgcataa aatgcccgcg aaataatcca accgcgcgga tcacgacccg
     5341 gtttatcaaa taccccaaac ggaatcaacg gaataccagt caaacttgtt tcttcttcta
     5401 gttcacgcgc ggcagcttgg tccgcagatt cattttcatc gacaaatccg cccggaaccg
     5461 cccattttcc gccttccata tttggttttc cttctgcgtt tgtaaggctt cgtttaatta
     5521 ataaaatatg taatgttggt ttcccgttca actcttttac tgtagttaaa atcatatcgc
     5581 tcgtatagcc atctggtgta cgaaactctt ttgcattata atttttcagc gcatcttctt
     5641 tgttcacaaa ttcttctgtc atgtcaaaat cagactcctt tttgtgtatt tagctctttc
     5701 cattatagta tcacaaaaaa aagaatttgt tccaatcact ggaacaaatc ctcttatttt
     5761 tcgagaattg tgcgaccttt ataagtgccg tctggtgaga tgcggtgtga catacggtat
     5821 tcgcctgttt cactatcgcg actcaaacct ggtgttgtta agcctttatg cgtacggcgc
     5881 ttgtttttct tcgctttgga cgtacgtcta gctggaactg ccatattgct cgcctcctta
     5941 tttcttacac ttgtatcatt gtaacgctaa tcacacgaaa catcaatctt acaaatcggc
     6001 taaattcttc acccattcat tcaaaggacg acgcggtttt gcttctggca cttccgctaa
     6061 gctagttaaa tgcaaggttc caacaatttt ttgctcagaa gggataccta aatcttccgc
     6121 aaacttcgca tcaaaaataa atctattcga ccgccaaatc atcccaattc ccgcttccca
     6181 gccaagtaat tggatatttt ggataaatgc actagttgcc ccgattgatt cgaaatcctt
     6241 tttcccgtga ccgataatat tcgtcgtcac aatgagtaag tatggcggcg taataatttt
     6301 cttcgcatag cctgctttta aatccgcaat ctctgcttca gaaaaactaa ccccttgttc
     6361 gcgctcatta aattcgatga ttttctcgat gtatcgctct ttttcagcaa gtgtatgcag
     6421 cacgtataca ttccacggct ctactttgct atgaaaaggc gcataggcag cttgctctaa
     6481 aatggtgttc accgtttctc ttgaaattgg cgcgtcgttc gctttcttaa tgctacgacg
     6541 ttccttaatt gttttttcaa tcatgtttaa ttccccctta aatgataaac gttatcattt
     6601 agagaattat agcatgattg gtttgtgggt tgctagtaaa ggggcttttg gggtttagca
     6661 tatgtgttta ttttgttcag atgattctct atagaccaaa acctgttttc taattctatg
     6721 gctgattcat aatatgtttt ttcaaataaa accatttatt tcccgctttc tatctcacca
     6781 tatttcttag aaaataacta taattcaata tgatagtgag aacataatat ccaaccgttt
     6841 aacccatatg aagcttg
//
LOCUS       DASDYO010000138         6711 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.138, whole genome shotgun sequence.
ACCESSION   DASDYO010000138 DASDYO010000000
VERSION     DASDYO010000138.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6711)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6711)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6711
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.138"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            33..1553
                     /locus_tag="U0290_002597"
     CDS             33..1553
                     /locus_tag="U0290_002597"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463885.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavocytochrome c"
                     /protein_id="HEM2302629.1"
                     /translation="MKKRLATTFIMLLSLALIIAGCGSNNTSKSDTEKTKEKEKTEVT
                     SGASKTSYTDPSELKDKYDIVIVGAGGAGMSAALEAKAKGMNPVILEKMPLAGGNTMK
                     ASSGMNASETKFQKEEGINDSNDKFYEETLKGGHGTNDKAMLRFFVDNSASAIDWLDS
                     MDIKLNNLTITGGMSEKRTHRPEDGSAVGKYLVDGLLKNVQEQKIPVFVNADVKEITQ
                     KDGKVTGVKVKLNNKDEKTISSDAVVVTTGGYGANKDMIEKERPDLKGYVTTNQEGST
                     GDGIKMIEKLGGTTVDMDQIQVHPTVQQDKSYLIGEAVRGEGAILVSQEGKRFGNELD
                     TRDNVTASINKLPEKSAYLVFDSGVKDRVKAIAQYEEMGFVEEGKTIDELAGKINVPK
                     EELTKTLDTWNASVKNKKDEAFGRTTAMDNDLSKAPYYAIKIGPGIHYTMGGVKINTN
                     TEVLDKDGKPITGLFAAGEVTGGLHGENRIGGNSVAEIIIFGRQAGDKSAEFVKAQ"
     gene            1757..2773
                     /locus_tag="U0290_002598"
     CDS             1757..2773
                     /locus_tag="U0290_002598"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463886.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="oxidoreductase"
                     /protein_id="HEM2302630.1"
                     /translation="MLKMGFIGNGKSTNRYHLPFILERDNIEVKTIYNRNPKTATWDK
                     IEGVHYTTDLDELLKDPEIQLITISTTQSSHFDYAKMVLENGKNVLVEKPFMMTYAEA
                     KEIFELAKERDLLVQCYQNRRFDSDFLTAQKVIESAKLGDLLEVEMHYDYFRPEIPES
                     VHEFKFYDSYLYGHGCHTIDQVLSYFGKPDNIHYDVRQLLGEGRMNDYFDLDLYYGVT
                     KVSVKSSYFRIKARPSFVLYGKKGMFTKETKDRQEEHLKLFYMPSNPDFGIDLPEHYG
                     TLTYVDDAGVWHEEKVISEVGDYGRVYDGLYDAIINGKPKQVTDEETLLQMEILEKGV
                     EACK"
     gene            2974..3420
                     /locus_tag="U0290_002599"
     CDS             2974..3420
                     /locus_tag="U0290_002599"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463887.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2302631.1"
                     /translation="MNISNLINEDRIIFDNRIQTKQLLFEKVAEVLGEEGSITNPKKF
                     IRDLYKREEETSTGIEDGFGIPHAKSKYVKEPLIVFVHSGIINDYFGLDDSPIECSFL
                     IGVPKKATDVHLQILSELSRKLMNKEFREKLKNSKNKTEIITILSN"
     gene            3434..4828
                     /locus_tag="U0290_002600"
     CDS             3434..4828
                     /locus_tag="U0290_002600"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HEM2302632.1"
                     /translation="MKIVGVTACPTGIAHTYMSAEKLTITAEALGYEVKIETQGAKVE
                     NVLTKEDIATADYVILAVDKEIDTSRFAGKKIKKVSTSRAIKEADVVIEETISGKGLI
                     SLEAKSSDISSEQPSKASLYNHFMNGVNYMLPFVIAGGILIAISFAFGIDASNPDSDS
                     YNALAAAFSKIGGDTAFGLMVPALAAGIAVSVAGRAGFAPGLVAGTLATVGGSGFLGG
                     MIGGILAGYVAHFFANKVNVTKSLASIYQLIVVPLLGITIVGLAMVFIIDTPIAWVLN
                     ALTGWLNGLGETSGVVFGLLIGVMMAADMGGPINKSISTFSIGLMSAGVTAPIAACMA
                     AGMVPPLGLALATLLFKNKFTKEEKTAGNSCWVLGASYITEGAIPFAVADPLRVIPSL
                     MLGSATAAAISMGAGVTSMAPHGGIWVMFIPNVINHLFIYLLAIAAGTVVTAISVGLL
                     KTPLNKRKNKEEMI"
     gene            4828..5688
                     /locus_tag="U0290_002601"
     CDS             4828..5688
                     /locus_tag="U0290_002601"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463889.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketose-bisphosphate aldolase"
                     /protein_id="HEM2302633.1"
                     /translation="MLYTMKDLLAVGKEHQFAVPAFNICSFDMLKAIMEEVEANNAPV
                     ILEIHPDEIEYLGDNFVATVREYAHKSKVPVVIHMDHGGTIKDVMRAIRNGYTSVMID
                     ASRASYEENVALTKQVVELAHKVGVSVEAELGTIGNNGSAEGGADTIIYTDPDQAEDF
                     VQRTGIDTLAVAIGTAHGLYPKDKKPELNMPLLKELNKRLDIPFVLHGGSGNPDKEVS
                     ESVQYGVRKVNLSSDLKSVFFEEVRRVLVDNPAMYEPNQVYPSANEKVKEVVRHKLHI
                     LNTTGQRDKY"
     gene            5745..6515
                     /locus_tag="U0290_002602"
     CDS             5745..6515
                     /locus_tag="U0290_002602"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463890.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2302634.1"
                     /translation="MLSTAKERQLKIVNRLKVEQFMRIIDLVELVNYSEATVKRDLVE
                     LEKEGLVRRTRGGAMIIDNKKIDLPYLMKMNERSNETSKIRIADIAKSLIRDDMVIFL
                     DSSSTSLHLIDVLSKFDGLQIITNGVMTASMLSEFTNARVSILGGSILTKRYTVNGAK
                     AYNDALTYNADIAFVSCRGIDYDKGATETHEGEALIKQAFRRQSSSLVLLVTEEKVGH
                     KFMHQSLACHDIDYLITDFKLDPDVEEQFKTHQITCLY"
     gene            complement(6499..>6711)
                     /locus_tag="U0290_002603"
     CDS             complement(6499..>6711)
                     /locus_tag="U0290_002603"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475627.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302635.1"
                     /translation="SFVSLILSMLCFMGLQVLNVIQKNVILLSLLDSEEFNDIHFFGS
                     LLVIPVLFLVLTIIFAYLSIKSNTNK"
BASE COUNT         2341 a         1106 c         1449 g         1815 t
ORIGIN      
        1 gggaaaattt tcaaaaaagt ggaggtacga aaatgaaaaa aaggttagct acaactttca
       61 tcatgctact atcgcttgca ttaattatcg caggttgtgg cagcaataac acaagcaaaa
      121 gtgacacgga gaaaacaaaa gaaaaagaaa aaacagaagt tacatcggga gcatcaaaaa
      181 ctagttacac agatccatcc gaattaaaag ataaatacga tatcgttatt gttggtgcag
      241 gtggtgcagg aatgtccgca gcactagaag caaaagcgaa aggcatgaac ccagtaatcc
      301 ttgaaaaaat gccactagca ggcggaaaca caatgaaagc ctcttctggt atgaacgcct
      361 ctgaaactaa attccaaaaa gaagaaggaa ttaatgatag caacgacaaa ttttacgaag
      421 aaacattaaa aggtggtcat ggaacaaacg ataaagcaat gcttcgtttt ttcgtagaca
      481 attccgccag cgccattgac tggttggatt ccatggacat taaattaaac aacttaacta
      541 tcacaggcgg aatgagcgaa aaacgtacgc accgtcctga agatggctcg gctgttggta
      601 aatacttagt agacggttta ctaaaaaatg ttcaagaaca aaaaattccg gttttcgtta
      661 acgcagacgt aaaagaaatt acacaaaaag acggaaaagt aactggcgtg aaagtaaaat
      721 taaacaataa agacgaaaaa acaattagtt cggatgcagt agttgtcaca actggtggct
      781 acggagctaa taaagatatg attgaaaaag aacgtccaga cttaaaagga tatgtaacaa
      841 cgaaccaaga aggaagtact ggcgacggta ttaaaatgat cgaaaaactt ggtggaacaa
      901 cagtggatat ggatcaaatt caagttcacc caactgttca acaagataaa tcttacctca
      961 tcggtgaagc cgttcgaggt gaaggtgcga ttttagtctc tcaagaaggt aaacgtttcg
     1021 gaaacgaatt agacacacgt gataacgtta cagcttccat caacaaatta ccagaaaaat
     1081 ccgcgtacct agtatttgat tcaggcgtga aagaccgcgt caaagctatc gcgcaatatg
     1141 aagaaatggg ctttgtggaa gaaggtaaaa caattgatga attagccggc aaaatcaatg
     1201 taccaaaaga agagctaact aaaacattag atacttggaa tgcaagtgtg aaaaacaaaa
     1261 aagacgaagc attcggcaga acaaccgcaa tggataatga tttatctaaa gcaccatatt
     1321 acgcaatcaa aatcggacca ggaattcatt acacaatggg tggcgtaaaa atcaatacaa
     1381 atacagaagt tttagacaaa gacggtaaac caatcacagg cctatttgct gcgggagaag
     1441 taactggtgg cttgcacggg gaaaaccgta ttggcggaaa ctctgtcgct gaaatcatta
     1501 ttttcggacg tcaagctggc gacaaatcag cagaatttgt aaaagcacaa taagaaccca
     1561 tacaccatag tgatgtgatt aatagaaaat aaaaacttgt taggacgcct taaacagacg
     1621 ttttagcaag ttttttattg gctaaatagc gcgttagtgt agtactatgg atgggtaaca
     1681 agtgagatat atacactgat aaattagcag cgtttaagct aaatttgtta gtttgttaaa
     1741 ataaggagga aatagtatgt tgaaaatggg ttttatcgga aacggaaaaa gtacgaatag
     1801 atatcattta ccatttattt tagagcggga taatattgaa gtgaagacga tttataatcg
     1861 aaatcccaaa acagccacat gggacaaaat tgaaggggtt cactatacaa ccgacttaga
     1921 cgagctgtta aaagacccag aaatccagtt aattaccatc tctacaacac aaagctctca
     1981 cttcgactat gccaaaatgg tgttagaaaa cggcaaaaat gtgcttgttg aaaaaccatt
     2041 tatgatgaca tacgctgaag cgaaagaaat tttcgaacta gctaaagaac gtgatttact
     2101 cgttcaatgc taccaaaatc gtcgtttcga ttccgatttc cttacagcac aaaaagtaat
     2161 tgaaagtgca aaattaggcg atttattgga agtagaaatg cattatgact atttccgtcc
     2221 agaaatccca gagtcggttc atgaatttaa attctacgac agttatttat acggtcacgg
     2281 ctgccataca atcgaccaag tactttctta cttcggcaaa ccggacaaca tccattatga
     2341 cgtgcgccaa ctgctcggcg aaggacgaat gaacgattat ttcgaccttg atttatatta
     2401 tggcgtaaca aaagtatccg taaaatcaag ctatttccgt ataaaagccc gtccaagctt
     2461 tgtcctttac ggcaaaaaag gtatgtttac aaaagaaaca aaagaccgcc aagaagaaca
     2521 tttaaaacta ttttacatgc caagtaatcc agactttgga atcgatttac cagagcatta
     2581 cggaacgctt acgtatgttg atgatgccgg agtttggcat gaggagaaag taatctctga
     2641 ggttggcgac tacggccgcg tttatgatgg tttgtatgat gcaattatta acgggaaacc
     2701 aaaacaagta actgacgaag aaaccttgct acaaatggag attttagaaa aaggcgtcga
     2761 agcttgtaaa taatgaaaaa ttgtccgcgg gagcaagctt gcggacaatt tttttggata
     2821 aaaatgattg atttcgttca tataaacaac caaaatagct ctaaaaatga actttttgca
     2881 taatacaccc ataatattga atgaagtcgt tcagcgtgat atagtgtaat caaacaagtg
     2941 aagcgcttac tttgttgaga gaggatgtgg attatgaata tatcgaattt aattaatgaa
     3001 gaccgaatta tttttgataa tcgtattcaa acaaaacaat tattatttga aaaagtagca
     3061 gaagtactag gtgaagaagg ttctataaca aatccaaaaa aatttatacg tgacttatat
     3121 aaacgagaag aagaaacttc tactggaatt gaagatggtt ttggcatccc tcatgcaaaa
     3181 agtaaatatg taaaagaacc attgattgtt tttgttcatt ctggcattat aaatgattat
     3241 tttggattag atgattcacc gattgaatgt agttttctta ttggtgttcc gaaaaaagcc
     3301 acagatgttc acttgcaaat cctaagtgaa ctatcgagga agttaatgaa caaagaattt
     3361 cgtgaaaaat taaaaaattc caaaaacaaa acggaaatta taacaatttt atcgaactaa
     3421 ggaggcgttt cacatgaaaa tagttggtgt tactgcttgt cccactggta ttgcgcatac
     3481 gtatatgtct gccgagaaat taactataac ggcagaagcg cttggttacg aagtgaaaat
     3541 cgagacacaa ggagctaagg ttgaaaatgt tttaacgaag gaagacatcg cgactgctga
     3601 ttatgtcatt ttagcagtcg ataaagaaat agatacatca aggttcgctg gaaagaaaat
     3661 taaaaaagta tccacttcca gagcgattaa agaggctgat gtggttattg aggaaactat
     3721 ttctggtaaa gggttaatca gtttggaggc gaaaagttcg gatataagtt cggaacaacc
     3781 gtcaaaagca agtttataca atcactttat gaatggtgtt aactatatgt tgccatttgt
     3841 catagctggc gggattttaa ttgctattag ttttgctttt ggaattgatg cctcaaaccc
     3901 tgactctgat tcgtataacg cacttgcagc tgcattttca aaaattggtg gggatactgc
     3961 atttggttta atggttccag cccttgcagc agggatagcg gtttctgtgg ctggtcgagc
     4021 aggatttgcg cccgggcttg tggcagggac actggcgact gttggtggat caggatttct
     4081 aggcggtatg attggtggta ttttggctgg ttacgtggca catttctttg ctaataaagt
     4141 caatgtcact aaatcacttg cttcgattta tcaattgatt gttgtaccgc ttttagggat
     4201 tacgattgtt ggtttggcga tggtatttat tattgataca ccaatcgctt gggttttaaa
     4261 tgcactcaca ggttggttga atgggcttgg tgagacatct ggcgtcgtat ttggactact
     4321 cattggtgtg atgatggcag cagatatggg tgggccaatt aataaatcta tttcaacctt
     4381 ttcaattggg ttaatgtcag caggtgtaac ggcgccgatt gcggcttgta tggcggctgg
     4441 aatggttccg ccacttggat tagcactcgc aacactatta tttaaaaaca aatttacaaa
     4501 agaagaaaaa acagcgggaa attcttgttg ggtgttaggt gcatcttata ttactgaagg
     4561 agcaattcct ttcgcagttg ctgatccgct ccgggttatc ccaagtttga tgttaggttc
     4621 tgcaacagct gctgcaattt cgatgggagc tggtgtaact tcgatggcgc ctcacggtgg
     4681 aatttgggtg atgttcattc caaatgtaat taaccattta tttatctact tactagcaat
     4741 tgcagcaggc acagtcgtga cagcaatttc tgtcggacta ttaaaaaccc cattaaacaa
     4801 gcgaaaaaat aaagaggaga tgatataatg ttatatacaa tgaaagatct tttagcagta
     4861 ggaaaagagc atcaatttgc ggtaccagca tttaatatct gtagttttga tatgttaaag
     4921 gcgataatgg aggaagtgga ggcaaataat gctcctgtaa ttttagaaat tcatccggat
     4981 gaaatagagt atctcggtga taactttgtt gcaacagtca gagaatacgc acataaaagt
     5041 aaggtgccgg tcgttattca tatggaccac ggtggaacaa tcaaagatgt gatgcgggca
     5101 attagaaatg gctatacttc tgtcatgatt gatgcttcaa gagccagtta cgaagagaac
     5161 gtggcgttga ctaagcaagt ggttgaactt gcgcataaag tcggtgtttc tgttgaagcg
     5221 gaacttggaa caatcgggaa caatggttca gcagaaggcg gggcggatac catcatatat
     5281 actgaccctg accaagcaga agatttcgta cagagaactg gcattgatac gctagccgta
     5341 gctattggaa cggcgcatgg tttataccct aaagataaaa aaccagaact gaatatgcct
     5401 cttttaaaag aattaaataa acgcttggat attccgtttg tacttcatgg tggttcggga
     5461 aatccagata aagaagtcag tgaatctgta cagtacggtg ttaggaaagt aaaccttagt
     5521 tcagatctga aaagtgtgtt ttttgaagaa gttcgccgcg ttttagtgga caatcctgcg
     5581 atgtatgaac caaatcaagt gtacccatca gcaaatgaaa aagtaaaaga agttgtaaga
     5641 cataaattac acattttaaa tactactggt caaagagata aatactaata agaagggtag
     5701 aagcgctagt tatagtgctt ttgcccttta aggagtggag gaacatgtta agcacagcga
     5761 aggaacggca actaaaaatc gttaaccggc taaaagtgga acaatttatg cggattattg
     5821 atttagtgga gcttgtcaac tacagcgaag ccactgttaa acgggattta gtagaattag
     5881 aaaaagaagg acttgtgaga cgaacaagag gcggcgcaat gattatcgat aataaaaaaa
     5941 tcgatttgcc ttatttaatg aaaatgaatg agcgaagtaa tgaaacgagt aaaataagaa
     6001 ttgccgatat tgccaaatca ctgattcgcg atgatatggt gattttctta gactctagct
     6061 caacatcact gcatttaatc gacgttttaa gtaaatttga tggactgcaa attattacaa
     6121 acggggtcat gacggcttcc atgctatcag aatttacaaa tgcaagagtt agtattttag
     6181 gaggatcgat tttaacgaag cgatatacgg tgaacggcgc aaaagcatac aatgacgctt
     6241 taacttataa tgcggatatt gcttttgttt catgccgggg gatcgactat gacaaaggtg
     6301 caacggaaac acatgaaggt gaagcactca tcaaacaagc tttcaggcgc cagtcaagtt
     6361 cgctcgtttt acttgtcacc gaagaaaaag taggacacaa gtttatgcac caaagcttag
     6421 catgtcatga tattgactat ttaattacgg acttcaaact ggacccagat gtagaggaac
     6481 agttcaaaac ccatcaaatt acttgtttgt attagatttt atacttaaat aggcaaaaat
     6541 aatcgtaagt actaaaaata aaacaggtat taccaataaa cttccgaaaa agtgaatgtc
     6601 attaaattct tcgctatcta atagtgataa taatatgaca tttttttgaa tgacatttaa
     6661 aacttgtaag cccataaaac atagcatact aagtattaat gaaacgaaac t
//
LOCUS       DASDYO010000139         6539 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.139, whole genome shotgun sequence.
ACCESSION   DASDYO010000139 DASDYO010000000
VERSION     DASDYO010000139.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6539)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6539)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6539
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.139"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..862)
                     /locus_tag="U0290_002604"
     CDS             complement(<1..862)
                     /locus_tag="U0290_002604"
                     /EC_number="2.5.1.-"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="protoheme IX farnesyltransferase"
                     /protein_id="HEM2302636.1"
                     /translation="MNQIEKTGELSASRFTVRDFTELVKIGIVNSNTITAFTGMWLAF
                     QLNGISFIQNVDVIFFTIVGSALIVAASGAFNNVIDRDIDGIMERTKNRPTMTGKISG
                     KRALMVALVLGVVGTIMLFMTTWQAGVLGVIGVFLYVVVYSLYAKRKLVSNTVIGSFS
                     GAVPPLIGWFAVEPSFSIVPIMLFLVMFCWQPPHFYAIAIKRKEEYAAAGIPMLPVVK
                     GIERTKKSMFFWVILLTILPFFMFELGIVYVVLATLLNIGWLALSIYGFKMEDSIKWA
                     KWMFVYSLNYM"
     gene            1098..2015
                     /locus_tag="U0290_002605"
     CDS             1098..2015
                     /locus_tag="U0290_002605"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="heme A synthase"
                     /protein_id="HEM2302637.1"
                     /translation="MKKFLKVWSVLTIICMTVVVFGGALVTKTGSADGCGNSWPLCNG
                     QLVRLTDVTPEKLIEFMHRMTTGISSIFVIVLAICAWIYMKNRRETKPLAIIAVLFLI
                     IQALMGMAAVVWGQNPYIMALHFGISIICYASIVLLALMIFEVDRKFDARNLVMGTKL
                     RINIYALTIYTYLAVYTGALVRHEKASMAVPVWPFENGHFIMPTSVQDYVQYFHRLAA
                     FILIVWLLYVTWLVFRDYRRYRVLTFSMVLSLVFIALQAVTGALSVYTGVNLYIALAH
                     SLIITMLFALLCYLCLLASRSKSNRLRIK"
     gene            2123..2866
                     /locus_tag="U0290_002606"
     CDS             2123..2866
                     /locus_tag="U0290_002606"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="potassium channel family protein"
                     /protein_id="HEM2302638.1"
                     /translation="MDKTKRKMIYETFMLILIVLSLALLPYRNSFTFILNWIIWVIFT
                     LDYLVRLYRADNKWHYVKTHPFQLIAIIPFYGGFRAARIVSFVHLLSITAMGRRYIVP
                     IYSFFRSNGLNRFLMIFVLLVIIIPVPMVFIEPEINNYPDALWWAIVTATTVGYGDIV
                     PVTPIGRILASIMMLFGIAFIGMITSTITNFFRAKKATTSSTQRASKITQLIADTPDL
                     TKEEIAVVEQFLALRKKELADENIKSDSE"
     gene            complement(2872..3513)
                     /locus_tag="U0290_002607"
     CDS             complement(2872..3513)
                     /locus_tag="U0290_002607"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465584.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MOSC domain-containing protein"
                     /protein_id="HEM2302639.1"
                     /translation="MERKIMHLAVGKPKELNLSNNKRMMTGIEKKLVQSASLTTTGFE
                     NDAPHNLKYHGGPDRTVCIYPYEHYAKWAAMFGEELQVTAFGENLITTNMLESSVQIG
                     DKFQIGETVIQITEARNPCSTIEKFNGIPNLYKAIHKTGLTGYLCRTITPGIIHATDE
                     IKQIHQESHGVTVAFCHDKVLHKNGTKEDLERILAVEALSERYRNQVEKQIKK"
     gene            complement(3532..4149)
                     /locus_tag="U0290_002608"
     CDS             complement(3532..4149)
                     /locus_tag="U0290_002608"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1775 domain-containing protein"
                     /protein_id="HEM2302640.1"
                     /translation="MKKIISSIVVLLAVFIIPFQASAHVSVLPSESTVDSWETYTMKV
                     PSEKDVASKKIVLKVEKGVSFESYEPVPGWTTTVDKKNGTVTWQTEGNGIEKGQFQRF
                     SFIAKNPSEEGEIAWNAYQYYEDGSIVEWVGAEDSETPHATTKIVKESSKSATGSHGE
                     VVAGAENTAGDTSSTGDNTILLWTAVAISVIALITGILAILSRKK"
     gene            complement(4162..5787)
                     /locus_tag="U0290_002609"
     CDS             complement(4162..5787)
                     /locus_tag="U0290_002609"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465586.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="copper resistance protein CopC"
                     /protein_id="HEM2302641.1"
                     /translation="MKLLKRVSFFLIILYLLIVPVQHVSAHAYLENSNPADQSHIQTA
                     PEKVTLVFNEEIEADFPLIEVKDSSGKQVETGKTTVSKKNNHMVEASLPADLKADVYS
                     VSWRVVSADGHAVTGIISFKLGDTKATFQAAEVPSSGADLQISSIQKAVLYIGFSLFI
                     GVLLFGLGLYPRKEQLTEKISGRLKKVTWVALALLGVALFMQLFIQTSITTGVSISES
                     FGPSKLVAFLTTKTGYIWISELIVWLLLAIFTIMMFFKKKQWSWFALLTESALIGYLI
                     FAKAQNGHAAASADKIVSISADMLHMIAASVWVGGILVLLFVLPQTGKARAVWSRFAI
                     VAIIAVASILVSGLLMAVMNLGQMANLFTTNYGKILLFKIGLFLLMALLGLGHYIYIK
                     LKNQRLPFKTILMELIIGTIILVVASVLTNVQTPPPPAPKAFDETIAAEGEKAKINLR
                     VEPATVGQNQFIITFTSADGSAKTDFEQVTITTKSTKTDEKSTFQAKLANDTQYFAEG
                     LYINQTGKWEITVHGLTKDFTDINQTFTTNITQ"
     gene            5927..6118
                     /locus_tag="U0290_002610"
     CDS             5927..6118
                     /locus_tag="U0290_002610"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465587.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302642.1"
                     /translation="MLRYIELFFMFAFVTLITMWIQALLAKWKPTILRSFWLRTLTFI
                     IIGYALMAPTLYIGSLLLK"
     gene            6180..>6539
                     /gene="mscL"
                     /locus_tag="U0290_002611"
     CDS             6180..>6539
                     /gene="mscL"
                     /locus_tag="U0290_002611"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465588.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="large conductance mechanosensitive channel
                     protein MscL"
                     /protein_id="HEM2302643.1"
                     /translation="MKKMLVEFRDFALKGNVLDLAVAVVIGAAFGKIVSSLVDNIIMP
                     LVGVLLGGLDFTDLSFKVGKSVIQYGAFIQSIVDFVIIAFAIFIFVKVLTSFIKKKEQ
                     TVEETPVPPTEEYLKEIR"
BASE COUNT         1834 a         1276 c         1279 g         2150 t
ORIGIN      
        1 tcatgtaatt taatgagtaa acgaacatcc atttagccca tttaatacta tcttccattt
       61 taaagccgta aatactaagt gctaaccaac cgatattcag taacgttgct aaaacaacat
      121 aaacgatgcc tagttcaaac ataaagaacg gtaggatagt taataaaatc acccagaaaa
      181 acatgctttt ctttgtacgt tcaatgcctt ttactactgg taacattgga attccagcag
      241 ctgcgtattc ctctttccgt ttaatcgcaa tcgcataaaa atgcggcggt tgccaacaaa
      301 acattacgag aaacagcatg attggtacga tgctaaatga tggttcgact gcaaaccaac
      361 caatcagcgg cgggacagcg cctgaaaaac taccaattac agtattacta actagttttc
      421 tttttgcata tagcgaataa acgactacat acaaaaagac cccgataacg ccaagaactc
      481 ctgcttgcca agttgtcata aataacataa ttgtaccgac aacacctagc acaagcgcaa
      541 ccattagtgc acgcttacca gaaattttcc cggtcattgt tggtctgttt tttgttcttt
      601 ccataattcc gtcaatatca cggtcgatga cattgttaaa agcgcccgaa gcagctacga
      661 taagtgctga accgacgata gtaaaaaata tcacgtctac attttgaata aaagaaattc
      721 catttaactg aaaggctaac cacattcctg taaaagcagt aatcgtattg gaattcacga
      781 taccaatttt cacaagctcg gtaaaatcac ggacagtaaa tctactcgcc gataactccc
      841 cagtcttttc tatctgattc actttttctc cccctaacac ttgctgatat aaaccagtga
      901 ttgcgaactg atagatatct tataccctta ttatgtgaaa aatacgcccc ttttgtcaat
      961 aaatcggctt tagtcttgta cgctttactt cttcaaataa acacgctaca attagtttga
     1021 tgtgtactca tgaacttata catagacaca aattttagta aaatctcaca cgcatctaaa
     1081 ggagagattg gtagataatg aaaaaattct tgaaagtttg gtccgtacta acgattattt
     1141 gtatgacggt cgttgtgttt ggcggagcgc tcgtaacgaa aactggttca gctgatggct
     1201 gcggtaatag ttggcctcta tgtaatgggc agttagttcg tttaacagat gttactccgg
     1261 aaaaattaat tgaattcatg caccgaatga cgacgggaat cagttcgatt tttgttattg
     1321 ttttagcaat ttgtgcttgg atttatatga aaaatcgtcg cgaaacaaaa ccacttgcga
     1381 ttattgcggt tctgtttcta attattcaag cgttaatggg aatggcggct gttgtttggg
     1441 gacaaaatcc gtatatcatg gcgctacact ttggaatttc gatcatttgt tatgcttcga
     1501 ttgtattgct tgccttgatg atttttgagg tagaccggaa attcgatgcc agaaacctcg
     1561 tgatggggac gaaattacgt attaatattt atgcactaac gatttacacg tacttagccg
     1621 tttatactgg tgcacttgta cgccacgaaa aagcaagtat ggccgttccg gtttggcctt
     1681 ttgaaaatgg gcactttatt atgcctactt cagtacaaga ttatgtgcag tatttccacc
     1741 ggttagccgc atttatttta attgtttggt tgctgtatgt aacttggctt gtgttccggg
     1801 attacagaag ataccgcgtg cttactttta gcatggtgtt gtcgcttgtg tttattgcac
     1861 ttcaagccgt tactggggcg ctgtctgttt atacaggagt gaacttgtat atcgcgcttg
     1921 cccatagctt gattattacg atgttgttcg cgctactttg ctacttatgc ttactggcat
     1981 caagaagtaa aagcaatcga ctacgaataa aataacgaac acggctggca actttttgtt
     2041 gtcagctttt ttatttgttt acggcttttg cgtcgtttta tgctaaaata agtgagagta
     2101 taagtcaaac gaggtggata acttggataa aacaaagaga aaaatgattt atgagacttt
     2161 tatgcttatt ctcatagtgc tttcccttgc cctattaccg tacagaaaca gctttacatt
     2221 tattttaaat tggattattt gggtgatttt tacgctagat tatctggttc gactttatcg
     2281 tgctgataat aaatggcatt atgtaaaaac gcatccgttt caactcattg caatcattcc
     2341 attttacggt ggatttagag cggctcggat tgttagtttt gtccatctat taagtattac
     2401 tgcgatgggg agacggtata ttgtaccgat ttatagcttt ttccgttcta atggtttaaa
     2461 tcgattttta atgatttttg tgttacttgt gattataatt cctgttccga tggtatttat
     2521 cgaacctgaa ataaacaatt atcctgatgc gctttggtgg gcgattgtga ctgcgacaac
     2581 agttgggtac ggtgatatcg ttccagtgac tccgattggg cggattttgg catcgattat
     2641 gatgttgttt gggatagcgt ttatcgggat gataactagt acgataacga actttttccg
     2701 cgctaagaaa gctactactt ctagcacaca aagagcaagc aagattaccc aattaattgc
     2761 agatacgcca gatttaacca aagaagaaat tgcggtcgta gagcaatttt tggcactacg
     2821 aaaaaaagaa ctggctgatg aaaatataaa aagtgatagc gaatgatgct atcacttttt
     2881 tatttgtttt tcgacttggt tacggtaacg ttcagataag gcttctaccg ccaaaatgcg
     2941 ttctaagtct tcttttgtcc catttttatg caaaacttta tcgtggcaaa aggctactgt
     3001 tacgccgtgt gattcttggt gaatttgttt gatctcatcc gttgcatgta taatgccagg
     3061 agtaatcgtt cggcataggt atccagtaag tccagttttg tgaattgctt tatagagatt
     3121 ggggattcca ttgaactttt caattgtact acatggattt cgggcttccg ttatttggat
     3181 aacggtttcg ccaatctgga atttatcgcc aatttgaaca gaactttcca acatattcgt
     3241 agtgatgaga ttttcaccaa aagcagttac ttgtagctct tcgccaaaca ttgctgccca
     3301 tttcgcgtaa tgttcgtatg gataaataca aaccgtacga tccggaccac cgtgatactt
     3361 caaattatgc ggtgcgtcat tttcaaaacc ggtagtggtt agactggcgg attgtacaag
     3421 ctttttttcg attcccgtca tcatccgttt gttatttgaa aggttaagtt ctttcggctt
     3481 acctacagct aaatgcatga ttttccgttc catctgctta ctcctttgaa gttatttttt
     3541 tcggcttaaa atagcaagaa tgcccgtgat aagcgcaata acgctgatag ctactgcggt
     3601 ccataataaa atcgtgttat ctccagtact gcttgtatcc cctgctgtgt tctccgctcc
     3661 cgcaactact tctccgtgcg agccagttgc ggatttggaa gactctttga caatttttgt
     3721 ggtagcatgt ggtgtctcgg aatcttctgc gccaacccat tcaacgatgg agccatcttc
     3781 ataatattga taggcattcc aagcaatttc gccttcttca cttggatttt tagcgataaa
     3841 actaaagcgc tggaattggc ctttttcaat tccgttgcct tctgtttgcc atgttactgt
     3901 gccatttttc ttatctactg tcgttgtcca gcctggcact ggttcataag attcgaaaga
     3961 tacgcctttt tctactttta aaacgatttt tttagaggcg acatcttttt ctgacggtac
     4021 tttcattgtg taggtttccc aggagtctac ggtcgattcg ctcggtaata cagaaacatg
     4081 tgcgctcgct tgaaacggaa tgataaagac agctaataaa acgacgatgg agctgataat
     4141 ttttttcatt atttttcccc tttactgtgt aatattggtt gtaaatgttt gatttatatc
     4201 tgtgaaatct tttgttaaac catgaaccgt aatttcccac ttgccggttt gattaatata
     4261 tagcccttcc gcaaagtatt gcgtatcatt tgcaagtttg gcttggaaag ttgatttttc
     4321 atctgtttta gtagattttg ttgtaatcgt cacttgttca aaatctgttt tggcagaacc
     4381 atctgctgaa gtaaaagtga tgataaactg gttttgtcca acggtcgctg gttccactcg
     4441 taaattgatt tttgcttttt cgccttctgc tgcaattgtt tcatcaaatg ctttcggagc
     4501 aggcggtggc ggtgtttgta cgttggttaa cacacttgcg acaacaagga taatcgtccc
     4561 aatgataagt tccatcaaaa tggttttaaa tggcaatcgt tggtttttga gtttgatata
     4621 aatgtaatga cctagcccta gtagtgccat tagtaaaaat aaaccaattt tgaaaagaag
     4681 tattttaccg taattggttg taaataaatt ggccatttga ccgaggttca tcactgccat
     4741 taataggccg ctgactaaga tggaggcgac tgcaatgatt gctacaatcg caaagcggct
     4801 ccaaactgcg cgcgctttcc cagtctgagg taatacgaat aaaagcacta aaatcccgcc
     4861 aacccaaacg cttgcagcaa tcatatggag catatcagcg ctgatactta ctattttatc
     4921 ggcactggca gcggcgtgtc cattctgagc cttcgcaaaa atcaaatatc cgattaatgc
     4981 actctcggtc aaaagcgcga accagctcca ttgtttcttt ttaaagaaca tcatgatagt
     5041 aaaaatggca agtagaagcc atacgataag ttcactgatc caaatataac ctgttttcgt
     5101 agtcaagaac gcaactaact tacttggtcc aaaactttca ctgatagaaa cgcccgttgt
     5161 gatacttgtt tgtatgaaaa gttgcatgaa gagagccaca cctagaagtg ctagcgctac
     5221 ccaagttact tttttcaaac gtccagaaat tttttctgtt aactgttctt ttcgtggata
     5281 aagtcctaac ccaaaaagaa gtacgccgat aaacagcgaa aaacctatgt ataaaacggc
     5341 tttttgaatc gaactaattt gcaagtccgc tccacttgag ggaacttccg ctgcttggaa
     5401 cgtcgctttc gtatccccta acttaaaaga aatgatcccc gtaaccgcat gtccatccgc
     5461 tgacacaacc cgccatgaaa cagaatagac atcggctttt aaatcagccg gtagagatgc
     5521 ttcaaccata tgattattct ttttagaaac agtggttttc ccggtttcca cttgtttccc
     5581 actggaatct ttgacttcta ttaaagggaa atccgcttca atttcttcat taaaaacaag
     5641 cgttactttt tcgggtgcgg tttgaatatg agattgatcg gccggattcg aattttccaa
     5701 ataagcatgt gcagaaacat gctgaactgg cacgattaat agatatagta taatgagaaa
     5761 aaaactgacc cttttcaata atttcatttg ctactccttt ttcgaacgaa cggttttact
     5821 ctttttaact tatcatgtgc aacaattgaa tggaaataat cggctcattt cctattgcaa
     5881 atgatgctac gattatggca tagtgataga aaaggaggtt ttacctatgc ttcgttatat
     5941 cgaattgttt ttcatgtttg cttttgttac actcatcacg atgtggattc aagcacttct
     6001 agcaaaatgg aaacctacta ttcttcgttc tttctggctt cgtacgctca catttattat
     6061 tattggctac gcattaatgg cgccaacgct atacataggc agtttattgc taaaataagt
     6121 tcagttgctt tcacatcgca gttagattgt ttatactggg aagtgggagg tgaattttca
     6181 tgaaaaaaat gttagtagaa tttagagact tcgcgttaaa agggaatgtt ctagaccttg
     6241 ctgtagcggt agttatcggg gctgctttcg gtaaaattgt ttcatcttta gtagataaca
     6301 tcattatgcc acttgtcggt gtactacttg gtggtcttga ttttacagat ttaagtttca
     6361 aagttggtaa atccgttatt cagtacggtg ctttcatcca gtccatcgtt gactttgtca
     6421 tcatcgcttt tgccattttt attttcgtca aggtacttac tagttttatt aagaaaaaag
     6481 agcaaacggt ggaagaaacg ccagtacctc caactgagga atacttaaaa gaaattcgt
//
LOCUS       DASDYO010000140         6521 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.140, whole genome shotgun sequence.
ACCESSION   DASDYO010000140 DASDYO010000000
VERSION     DASDYO010000140.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6521)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6521)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6521
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.140"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            78..1805
                     /locus_tag="U0290_002612"
     CDS             78..1805
                     /locus_tag="U0290_002612"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302644.1"
                     /translation="MDQKKYSWRKFFQLLISAKPANWIIFCALFASVITTVAGLVVPL
                     FTKNLIDGFSIASLDVKMIALIVLAFVLQAITNGFSIFLLNYMGQKVVATIRERLWKK
                     IVHLPVSYFDNTKTGEMVSRMVNDTVVVKELIADHFPQFVTGIISVVGAIIILFFMDW
                     KMTLIILVAVPITALVVAPLGQKMFKISKGLQNETADFTGSISQTLSEARLVKASNAE
                     TLETEAGHQGINRLFGFGIREAKVVAVLGPLIFFVVMGVIVGIIGYGGIRVSAGTMTT
                     GTLIAFLLYLFQIIVPVTSFATFFAQLQKAKGATERIADILNETEEDFDAGKKVDVSG
                     KTIRASDISFSYNEGEPILKHVSFDTKPGEVIAFAGPSGGGKSTLFAILERFYQPKTG
                     EILVGDIPLSEISINSWRTQIGYVSQESAMLSGTIRDNLCYGLDREITEDELWNVAKL
                     AYADGFISELPDKMATEVGERGVKLSGGQRQRIAIARAFLRNPNILMLDEATASLDSQ
                     SEQIVQQALANLMEGRTTFVIAHRLSTIVNADQILFIEHGEITGRGTHSELVASHPLY
                     ASFAEQQLK"
     gene            complement(1859..2110)
                     /locus_tag="U0290_002613"
     CDS             complement(1859..2110)
                     /locus_tag="U0290_002613"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466268.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TfoX/Sxy family protein"
                     /protein_id="HEM2302645.1"
                     /translation="MANLSELPNIGKVLEQDLIKAGIKTPVELKDVGSKEAFLRIWEN
                     DSSVCLSELYALEGAVQGIRWHGLDEAKKIELKKFHQSL"
     gene            complement(2130..3413)
                     /gene="serS"
                     /locus_tag="U0290_002614"
     CDS             complement(2130..3413)
                     /gene="serS"
                     /locus_tag="U0290_002614"
                     /EC_number="6.1.1.11"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466269.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="serine--tRNA ligase"
                     /protein_id="HEM2302646.1"
                     /translation="MLDVKLLRNNFDEVKQKLQNRGEDLGEFEKFGELDKRRRTLIVE
                     TEALKSQRNEVSQEIAKLKREKQDADAKIEEMRVVGDRIKTLDIELREIDEKLDMILM
                     SIPNIPHESTPVGESEDDNVEIRKWGEVREFDFEPKAHWDLGTDLDILDFENAAKVTG
                     SRFVFYKKLGARLERALINFMMDLHSNEHGYEEMLPPYMVNRASMTGTGQLPKFEEDA
                     FLIEAEDYFLIPTAEVPVTNYHREDILKAEDLPRKYTAFSACFRSEAGSAGRDTRGLI
                     RQHQFNKVELVQFVKPEDSYAALEKLTGNAEEVLRRLELPYRVLSMCTADLGFTAAKK
                     YDLEVWIPSYNSYREISSCSNFESFQARRANIRFRREPGSKPEYVHTLNGSGLALGRT
                     VAAILENYQDADGSVRIPKVLQGYMGGIEKIELPK"
     misc_binding    complement(3472..3694)
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            complement(3747..4166)
                     /locus_tag="U0290_002615"
     CDS             complement(3747..4166)
                     /locus_tag="U0290_002615"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466270.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyridoxamine 5'-phosphate oxidase family
                     protein"
                     /protein_id="HEM2302647.1"
                     /translation="MKNELEDKILAILEQHQVGVLTSVQGDYPHARYMTFLHDGLTLY
                     TPSGKELPKTEEVRRNPHVSVLIGYESPGSAFLEINGLASLEEDESIKERIWENISKE
                     WFQGEDSPSFVVIKIVPEQIRILNSDDDGPDTLDLIG"
     gene            4296..4868
                     /locus_tag="U0290_002616"
     CDS             4296..4868
                     /locus_tag="U0290_002616"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466271.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate/anthranilate synthase
                     component II"
                     /protein_id="HEM2302648.1"
                     /translation="MILIIDHNDSFTYNLYQYFLELQEEVQVVSATNFSLEIFQQLVP
                     EMVVLSPGPGSPEDFPVSLALLGKIQVPILGICLGHQMIGHFFGAKVVPAKVPVHGKT
                     SIISHTGEGLFAELAPKFQVTRYHSLVIDPATVPANLKVTALTEDGVIMGLAHVSKPI
                     HSVQFHPEAILSENGHAILENFIRLGRNVK"
     gene            4865..>6521
                     /gene="pabB"
                     /locus_tag="U0290_002617"
     CDS             4865..>6521
                     /gene="pabB"
                     /locus_tag="U0290_002617"
                     /EC_number="2.6.1.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466272.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminodeoxychorismate synthase component I"
                     /protein_id="HEM2302649.1"
                     /translation="MSLLRFDFEGDTKIFENPLYELVTHDLAEVLPIMKAAEEAQKSG
                     KYVAGFVSYEAAPAFRSNLKTKKPSGNMPLVWFGVYDNFNDTATETPDSSPLSFKMNT
                     SFPEYAEKIEQIKAEIAAGNTYQINYTVRLQSDVPNSFSSQATYETLQQIGKANYTAL
                     LSTSDFEIISASPELFFKWKENLLTTRPMKGTIRRGITEQADLEAHDWLKNDPKNRAE
                     NVMIVDLLRNDLGMIAVPGSVKVPKLMTLEPYPTVWQMTSTVTAETPPETDLTAVFKA
                     LFPCGSITGAPKARTMEIISELEDSPRGVYCGAIGFLEPNGNAIFNVPIRTIAIADNK
                     ATYGVGGGIVWDSEAASEFSEIHAKSAILEKTTKFSLIECLRIENGELFRTEYHLKRL
                     QTSADFFGIPFNREETEKLWTKTAQKNTTDTYKMRFLLHPDGAHDLELTRIDTKNKRI
                     TAQLADKPVPSNDLFLYHKTTHRKVYENLKNTQTEETLLWNERGELTEFINGNIVLGI
                     NGCFFTPPVTSGLLSGTMRAELLAKNKISEKTLAKKDLLEADYV"
BASE COUNT         1904 a         1376 c         1251 g         1990 t
ORIGIN      
        1 ggtttatttt tagataaatt gattatactt aaaaagtaag taatttatgg atgggtaact
       61 caggaagggt gaaatgaatg gatcagaaaa aatatagttg gcgaaaattt ttccaattac
      121 ttattagcgc aaaacctgcg aattggataa ttttctgcgc tttatttgcc agtgtgataa
      181 ctacagttgc cggccttgtt gtgccacttt ttacaaagaa cttaattgat ggcttttcaa
      241 tagcttcact cgatgtaaaa atgattgctt taattgtgtt ggcatttgtt ttacaagcta
      301 taacgaatgg cttctcgatt ttcttactta actacatggg tcagaaagtc gttgcaacga
      361 ttcgcgaacg tttatggaag aaaattgtgc atttaccggt ttcttacttt gataatacaa
      421 agactgggga aatggtaagt cgcatggtaa atgatacagt ggtagtgaag gagctgattg
      481 ccgaccattt tccgcaattt gtaactggga taatttctgt tgtcggggcg attattattt
      541 tgttcttcat ggactggaaa atgacactca ttattttagt ggccgttccg attactgcgc
      601 tagttgttgc accacttggt cagaaaatgt ttaaaatatc taaaggtctt caaaatgaaa
      661 cggctgactt cactggttcc attagccaaa cgctatcaga agctaggctc gtaaaggctt
      721 cgaatgcgga aacactagaa accgaggctg gccatcaagg aattaatcgc ctatttggct
      781 ttggtattcg tgaggcgaaa gttgttgctg tgcttggacc gctaattttc tttgttgtca
      841 tgggggttat cgttggcatc atcggttacg gtgggattcg tgtttcagct ggaacgatga
      901 ctactggtac cctcatcgcc tttttgctct atctgttcca aattatcgtt cctgtcactt
      961 ctttcgcaac attcttcgcc caacttcaaa aagcaaaagg cgcaacagaa cgaattgcgg
     1021 atattttgaa tgaaacagaa gaagatttcg acgctggtaa aaaagtagat gtgagcggaa
     1081 aaaccattcg cgcgtctgat atttccttct cctataatga aggtgagcct attctaaaac
     1141 atgtttcttt tgatacaaaa cccggagaag ttatcgcatt cgctggtcca agcggtggag
     1201 gtaaatcaac cttatttgcg attttagagc gtttttatca accgaaaacg ggagaaattt
     1261 tagtaggcga tattcccctt tccgagattt cgatcaattc ctggcgaaca caaattggtt
     1321 atgtctccca agaaagtgcg atgctttctg gtacaattcg cgataatctt tgttatggtt
     1381 tggaccgaga aattacggaa gatgagctat ggaatgtagc aaaactagct tatgctgacg
     1441 gctttatttc cgaacttcct gacaaaatgg cgaccgaagt cggcgaacgt ggcgtgaagc
     1501 tctcaggtgg tcaaagacag cgaattgcca ttgctcgagc attcttgcgt aatcctaata
     1561 tccttatgtt agatgaggct acagctagtt tagatagcca atccgagcaa atcgttcaac
     1621 aagctttggc aaacttaatg gaaggtcgaa ctacttttgt tatcgctcat cgcctttcta
     1681 ctatcgtcaa tgccgaccaa attctcttta ttgaacacgg ggaaataact ggtcgtggca
     1741 cacatagtga attagttgct tcccatccac tttacgcttc ctttgcagaa caacaattaa
     1801 aataactatt tcccgggaaa taaaaaaacg acgatgcgaa tatgcatcgt cgctttttct
     1861 ataaggattg atgaaacttt ttgagttcga ttttctttgc ttcgtctaaa ccatgccacc
     1921 tgatgccttg aacggctccc tcaagcgcat atagttcact tagacaaacg cttgaatcat
     1981 tttcccaaat acgtaaaaag gcttctttgc ttccaacatc ttttagctcg acgggagttt
     2041 ttattcccgc tttgattaaa tcctgctcca gtactttgcc aatgtttggt aattcgctaa
     2101 ggttcgccat tacagttcct tcttccatat tattttggta attctatttt ctcgataccg
     2161 cccatgtagc cttgcaatac tttcggaatg cgtacagaac catctgcatc ttggtagttt
     2221 tccaaaatag cagcgactgt acgacctagt gctaacccgg aaccatttaa tgtatgcacg
     2281 tattccggtt tgctccctgg ttcacggcgg aaacgaatgt tagcgcgtct tgcttggaag
     2341 ctttcaaaat tactgcaaga agaaatctca cggtaagaat tatagcttgg aatccaaact
     2401 tctaaatcat attttttagc agcagtgaag cctaaatcag ccgtacacat gcttaatacg
     2461 cgatatggta attctaggcg acgcaatact tcttctgcgt ttccagttaa tttttcaagc
     2521 gccgcgtagg aatcttctgg tttaacaaat tgaactaatt ccactttgtt aaattgatgc
     2581 tggcgaatta agccgcgcgt atcacgacca gcagatcccg cttcagaacg gaaacatgcg
     2641 ctaaatgctg tatattttct tggtaaatct tctgctttta aaatgtcttc gcggtggtag
     2701 tttgttactg gtacttccgc tgttggaata aggaaataat cttctgcttc aattaagaaa
     2761 gcatcttctt caaatttcgg caattgacca gttccagtca tgctcgcacg gttcaccatg
     2821 tacggtggta acatttcttc atagccatgt tcattcgagt gcaagtccat cataaagtta
     2881 attagcgccc gttccagtct tgcacctaat tttttataaa agacaaaacg gctaccagtt
     2941 actttcgcag cattttcaaa atcaagaata tctaagtctg ttcctaagtc ccagtgagct
     3001 tttggttcaa aatcaaattc gcgtacttcg ccccacttgc gaatttccac gttatcgtct
     3061 tccgattcac caaccggagt agactcatgc ggaatatttg gaatcgacat taaaatcata
     3121 tctaacttct cgtcgatttc tcttagctcg atgtctaatg ttttaatacg atcaccaacg
     3181 acacgcatct cttcaatttt agcatctgcg tcttgttttt cgcgttttaa tttagcgatt
     3241 tcttgagaca cttcattacg ctgacttttc agcgcttctg tctccacgat tagcgtacgg
     3301 cgacgtttat ctaactcacc aaatttctcg aattcaccaa ggtcttcccc gcgattttgt
     3361 aatttctgct ttacttcatc aaaattatta cgtaacaatt taacatctaa catgctaact
     3421 cctcctttat tttttccata taaaaactcc cgtactttcc cgaattaaca ggaaagggac
     3481 gagagttaac cgcgttgcca cccttattgg gacttcaaaa aatccccagc ttcatttagg
     3541 tttaacggac ccaaccggaa tgatttactc gcaaaattat gctttccacc actcactcca
     3601 agatggattc ataaggaaac ttcaccagtt cacaccaccc actggctctc tttagaaatt
     3661 ctgcctcatt actacttctt gtcttcgctt ttcgtattaa tttaaagtta ttctatcgca
     3721 tatctgctta aattacaagc aaatctttaa ccgattaaat cgagcgtgtc tggaccgtca
     3781 tcatcagaat tcaatattct aatttgttca ggtacaattt ttataacgac aaaggacggt
     3841 gaatcttcgc cttggaacca ttctttagaa atgttttccc aaatgcgttc tttgattgat
     3901 tcatcttctt caagagaagc caaaccatta atttctaaaa acgcagaccc tgggctttcg
     3961 taaccaatta aaacggatac atgtgggttt ctacgtactt cttctgtctt tggtaattct
     4021 ttgccagacg gtgtgtaaag ggttaaacca tcgtgcagaa acgtcatata tctagcatga
     4081 ggatagtctc cttgtacgga tgttaataca cccacttgat gttgttccaa aatggcaaga
     4141 atcttatctt ctagttcatt tttcatctca aacaccttcc tttggttatt tagtgtacct
     4201 ttccactcgg ctcccggctt taaacattcg ggcttgttat ctctctagct atttgctata
     4261 aaagagtata accgttttaa ctagggggat ttaaagtgat tttaatcatc gaccataatg
     4321 attcatttac atataattta taccaatatt ttttagagct tcaagaggag gtacaggttg
     4381 tttctgctac taatttttcg cttgaaatat ttcaacaact cgttcccgaa atggtagttc
     4441 tatcaccagg gccaggttca ccggaagact tccctgtaag tttggcacta ctaggtaaaa
     4501 ttcaagttcc tattcttggc atttgcctcg gtcatcaaat gattggtcat tttttcgggg
     4561 caaaagtggt gccggcaaaa gtcccggttc acggaaaaac aagtatcatt tcgcatactg
     4621 gggaagggtt gtttgcagag cttgcaccaa agttccaagt aacgcgctac cattctttag
     4681 ttattgatcc tgccacagtt cccgctaatt taaaagtaac cgcactgaca gaagacggcg
     4741 ttataatggg actagctcac gtatcaaaac cgattcacag cgtccagttc cacccagaag
     4801 caatcctatc tgaaaacgga catgcaatac ttgaaaactt tatacgatta gggagaaatg
     4861 ttaaatgagc ttattacgat ttgattttga aggcgacaca aaaatttttg aaaatccact
     4921 gtatgaacta gttacgcatg atttagcaga agttcttcct ataatgaaag cagccgaaga
     4981 agcccaaaaa tcaggaaaat acgtcgccgg ttttgtcagt tatgaggccg cgcctgcttt
     5041 tcgaagtaat ttaaaaacaa aaaaaccgag cggaaacatg cccctcgtct ggtttggtgt
     5101 atacgataat tttaacgata cagctaccga aacaccagat tcctcgccgc tctcttttaa
     5161 aatgaatact agtttccctg aatacgccga gaaaatagag caaatcaaag ctgaaattgc
     5221 agctggaaat acttaccaaa taaactacac cgtgcgactt caaagtgatg tgccaaacag
     5281 cttttcttct caagcgactt atgaaacgtt acagcagatt ggaaaggcga attacaccgc
     5341 cctactttca accagtgact ttgagattat ctcggcttca cccgagctct tttttaaatg
     5401 gaaggaaaat cttctaacga cacgcccgat gaaaggtact attcgccgcg gaataacgga
     5461 gcaagcggac ttagaagcac atgattggct aaaaaacgat cctaaaaacc gtgcagaaaa
     5521 tgtgatgatt gtcgatttac tacggaacga ccttgggatg attgctgtac ccgggagtgt
     5581 caaggttcct aagttaatga cgctagaacc ttacccaact gtttggcaaa tgacttcaac
     5641 cgttacagca gaaacacctc ctgagactga tttaacagct gtttttaaag cactcttccc
     5701 atgtggctca ataactggtg cgcctaaagc acgaacaatg gaaattattt cagaactaga
     5761 agattctcct cgtggtgttt actgcggagc aattggcttt ttagaaccta acggaaatgc
     5821 gattttcaat gtaccgattc gtactattgc tatcgcagac aacaaggcaa cttatggtgt
     5881 tggtggcggt atcgtctggg attcggaagc cgctagcgaa ttttccgaaa tccacgcaaa
     5941 atcagctatt ttagaaaaga cgacaaaatt ttctttaatt gaatgtttgc gaattgaaaa
     6001 tggtgagctt ttccgaaccg aatatcattt aaaacgacta caaacaagcg cagacttttt
     6061 cggtattcct tttaataggg aagaaacaga gaaactatgg accaaaactg cgcaaaaaaa
     6121 tacgaccgac acatacaaaa tgcgcttttt attacatcct gatggcgcac atgatctaga
     6181 actaacaaga attgatacaa aaaacaagcg aataacagcg caacttgctg ataaaccagt
     6241 cccttcgaat gatttatttc tctatcataa aacgactcat cgaaaggtct atgaaaactt
     6301 aaaaaatact caaaccgagg aaacactact ttggaatgaa cggggtgaac tgacagaatt
     6361 tattaacggg aatatagttc taggtataaa tggctgtttt ttcacgccac cagtaacttc
     6421 aggtcttctt tcagggacaa tgagagcaga actattagct aaaaataaga tttccgagaa
     6481 aacactagca aaaaaagacc ttttagaagc ggactatgtg t
//
LOCUS       DASDYO010000141         6398 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.141, whole genome shotgun sequence.
ACCESSION   DASDYO010000141 DASDYO010000000
VERSION     DASDYO010000141.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6398)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6398)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6398
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.141"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            44..1930
                     /locus_tag="U0290_002618"
     CDS             44..1930
                     /locus_tag="U0290_002618"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466161.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FAD-dependent oxidoreductase"
                     /protein_id="HEM2302650.1"
                     /translation="MPEKNIVLIGAGYAGVHAAKKLAKKYKKDKDVNITLIDRHSYHT
                     MMTELHEVAGGRVEPTAIQYDLRRLFNRTKVNLVTDNVTHVDHDKKVVTTEHGSYPFD
                     YLVLGMGGEPNDFGTPGVGENGFTLWSWEDSVKLRNHIEETVTKASREQDVEKRKAML
                     TFVVCGSGFTGIEMVGELLEWKDRLAKDNKIDASEIKLVVVEAAPTILNMLERRDADK
                     AERYMVKKGIEIMKNAAIVEVKPESIVLKSGEELPTSTLIWTAGVRANSDTKDYGMES
                     ARAGRLKVNQYMEAEGLKDVYVVGDLAYFEDEEGKPTPQIVEGAEQTALTAAKSIIVE
                     MSGTGEKEPFQGKYHGVMVSIGAKYGVAHLGGMHLSGWFAILMKHMVNLYYFFGIRSG
                     YYMWQYIMHEFFHIKDHRNIFRGWTSRYGNVLWVLPLRVYLGWFWIDEALSKIYGETT
                     WDKVSITNLKPLFNGIGSDSWLTATTSKMPFEWLQTAATSGASQAAGDAAGAAATNVT
                     TPILSHMPGWFQWIMELLMPNLDVALVMQKVVPFVELAIGLAMVVGLFTWLVSIGSAG
                     FLVMFTLSAMLGWDKFWALPASIALLNGAGRTFGLDYWAVPWFQKHLGHWWYGKPRSV
                     YRDK"
     gene            2106..2540
                     /gene="eetA"
                     /locus_tag="U0290_002619"
     CDS             2106..2540
                     /gene="eetA"
                     /locus_tag="U0290_002619"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466162.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin-based extracellular electron transfer
                     system protein EetA"
                     /protein_id="HEM2302651.1"
                     /translation="MKKYLSMVKRWDIIIILSLCILSFLPIAIFSYVKANEPAPANGK
                     KELVAVISVDSKEYKTVTLTGHKGTESFDVKQPDGHTNTIEVSGEEIRISKANCNDQV
                     CVRTGAIDKQGDTVVCLPHKLVIEVKASDGSSGDSDDPIISS"
     gene            2573..3115
                     /gene="eetB"
                     /locus_tag="U0290_002620"
     CDS             2573..3115
                     /gene="eetB"
                     /locus_tag="U0290_002620"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466163.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flavin-based extracellular electron transfer
                     system protein EetB"
                     /protein_id="HEM2302652.1"
                     /translation="MTKNRRLVYIALLAAQAVVISLLERAIPFPFAFAPGAKLGLANI
                     ITCISLYTLSAKDTFMIICIRLVLSTLLGGTISTFMYSAAGAILSFLGMWLVQQLGPK
                     RVSIIGVSVTGGILHNVGQLVIASWIAGTWSVMLYLPVLSFIGILSGIAVGIAANYLL
                     KNVQTLRMFADAKQSQAAQK"
     gene            3137..4117
                     /locus_tag="U0290_002621"
     CDS             3137..4117
                     /locus_tag="U0290_002621"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466164.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="polyprenyl synthetase family protein"
                     /protein_id="HEM2302653.1"
                     /translation="MQLHAMWDEYPALSKDLQEVLQTIEKNIQIRDKHVEQNVKDLIH
                     AGGKLLRPAFALLSAQAGPDYDKERAVSIAAALEVLHMATLIHDDVVDDSPLRRGIPT
                     IHSKYGRNYAVYTGDYLFCICFKILSAHASSVENIEFNSKNIEKILMGELDQMRTSYK
                     MNVTVREYLTRISGKTAQLFALSCYSGATGSKATRMTVAKCYNIGHYLGMAFQIIDDV
                     LDYTSTDEGLGKPVLNDMKQGIYSLPLIYAMKGHLAEFEPLLSQKLDMTDEASEQVLA
                     LISKYKGVEQAFKLANKYTNKALREIKKLPAGAYRDDMYRLTKNILDRDI"
     gene            4207..5538
                     /locus_tag="U0290_002622"
     CDS             4207..5538
                     /locus_tag="U0290_002622"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic nucleotide phosphodiesterase"
                     /protein_id="HEM2302654.1"
                     /translation="MIRFFKIVTPILLSISLVACSSASGKTENITAPIEKDRNLSMVV
                     TTDVHYFAPSLTDNGKAFEKYVAAGDGKQLAYSDEITDAFLADVEAKKTDVLIISGDL
                     TNNGEKTSHEELAKKLTQVEKTGTQVFVVPGNHDINNPWARKFEKDKQLPTDTISPTD
                     FSKIYGDFGYKDAISSDEFSLSYLAAPSSKVWLLMLDTAIYKTNMQQGTPTTEGGLTA
                     GTLDWIKESSALAKKNGAKLVPVLHHNLTDHNDVIQKGYTINYNQQVIDALTEGSMDF
                     SLSGHIHTQNIRSAKSTDGKEITDIVTNALSVFPHKYGNITYSAKNKNFTYQSQKLDM
                     EAWAKAQGSTDENLLNFNQFDYETFYNSGYDKAMMDLMTDESYDKYNQADKEKMADTM
                     GLNNMYFFAGTAPPKSDGMALWDSAPNSFLKDYVLSSSNPPKKSNDYYVSP"
     gene            complement(5585..>6398)
                     /locus_tag="U0290_002623"
     CDS             complement(5585..>6398)
                     /locus_tag="U0290_002623"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466166.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF4003 domain-containing protein"
                     /protein_id="HEM2302655.1"
                     /translation="NKEIKRQLGMFTALNGNVRASLVGLLMANDNASRESVQQVIANY
                     NTLIQAGFQRTEYTYFAAYLLLESENPKKTAQKAKTIHQLFKKDHPFLTKSEDVTTAV
                     FLANLPEENTTKLAEITEYYFQEFAAKGFRKNDSLQFLATTGTLLYGEKDSKFIRRVD
                     NIVEELRQKGIKVKPLHYSSIGILAFVMDARKIDSGLVNLIDELQQQPGLRFGREFVT
                     ALAISLYTEKQSGQMSKEQLEGLMVNVHILIAMEQAAAVSAAAAASAAAASS"
BASE COUNT         1907 a         1147 c         1326 g         2018 t
ORIGIN      
        1 attttatttt tgtgaataaa cttacaagga gttgaggaag catatgcctg aaaagaatat
       61 cgttttaatt ggggcaggat atgcaggtgt acacgctgct aagaaattag ctaagaaata
      121 caagaaagac aaagacgtta atattacatt aatcgatcgt cattcgtacc atacaatgat
      181 gactgaacta catgaggttg ctggtggtcg tgttgaacca actgcaattc aatatgattt
      241 acgtcgtttg tttaatagaa caaaagttaa tcttgtaact gataacgtga cacatgtaga
      301 tcatgataaa aaagttgtaa caacagagca cggtagttat ccgtttgatt acctagtact
      361 tggtatgggc ggagaaccta atgatttcgg aactcctggt gttggcgaaa atggctttac
      421 actttggtct tgggaagatt ctgttaagtt acgcaatcat attgaagaaa ctgtaacgaa
      481 agcatctcgc gaacaagacg ttgaaaaacg taaagcaatg ttaacattcg ttgtttgtgg
      541 atctggattt actggtatcg aaatggttgg ggaactttta gaatggaaag atcgtcttgc
      601 taaagataac aaaattgacg catctgaaat taaactagtt gtagtagaag ctgctccaac
      661 aatcctaaac atgcttgaaa gaagagacgc tgacaaagct gaacgttaca tggttaaaaa
      721 aggtattgaa atcatgaaaa acgctgctat cgttgaagtt aaacctgaaa gcatcgtact
      781 taaatctggc gaagagcttc caacaagtac attaatttgg actgctggtg ttcgcgctaa
      841 ctctgataca aaagattacg gtatggaatc tgctcgtgca ggccgtttga aagtaaacca
      901 atatatggaa gcagaaggtc ttaaagacgt ttatgtcgtt ggtgaccttg cttactttga
      961 agatgaagaa ggtaaaccaa ctccgcaaat cgttgaaggt gctgaacaaa ctgcattaac
     1021 tgcagcgaaa agcattatcg tggaaatgag cggtactggc gagaaagaac cattccaagg
     1081 taaatatcat ggtgtaatgg tttctatcgg agctaaatac ggtgttgctc accttggtgg
     1141 tatgcactta tctggttggt tcgctatttt aatgaagcat atggttaact tgtattactt
     1201 cttcggtatt cgcagtggtt attacatgtg gcaatatatt atgcatgaat tcttccacat
     1261 taaagatcac cgcaacattt tccgtggttg gacttctcgt tatggtaacg tactttgggt
     1321 tcttccttta cgtgtatatc ttggttggtt ctggattgac gaagctcttt ctaaaatcta
     1381 cggtgaaact acatgggata aagtaagtat tacaaattta aaacctttat ttaacggtat
     1441 cggttctgat tcttggttaa ctgcaactac ctctaaaatg ccattcgaat ggttacaaac
     1501 tgctgctaca tctggtgcta gtcaagctgc cggtgatgct gctggggctg ctgcaacaaa
     1561 tgtaactact ccaattctta gtcatatgcc tggttggttc cagtggatta tggaacttct
     1621 aatgccaaac cttgatgttg ctctagtaat gcaaaaagtt gtaccttttg ttgaacttgc
     1681 aatcggtctt gctatggtgg taggtctatt cacttggctt gtaagtatcg gaagtgccgg
     1741 attcctagta atgtttacac taagcgctat gcttggttgg gacaaattct gggcgttacc
     1801 agcttctatc gcacttctaa atggcgctgg acgcacattt ggtcttgatt attgggctgt
     1861 tccttggttc caaaaacatc ttggtcattg gtggtacggt aagccaagat ccgtttacag
     1921 agacaagtaa tttagttagt taaaatttta aataaaaact cgggagtgca tccaaaagcc
     1981 agttttggca taggaggtgc ttccgttttt attatttgtt gatttcttga actttttcct
     2041 attatattta ggcattatcc tttaaaatag gatttgtaca tgacattttg aaaggaggca
     2101 atacggtgaa gaagtatctt tctatggtga agcgttggga tattattatt attttatctc
     2161 tttgtatact ctcctttttg ccgattgcta ttttttcata tgtaaaagcg aatgaaccgg
     2221 ctcctgctaa cggaaaaaaa gagcttgttg cagttatttc tgttgatagt aaagaatata
     2281 aaactgttac gctcactggg cacaaaggga cggaaagctt tgatgtgaaa caaccagatg
     2341 gacatactaa cacgattgag gtttcggggg aagaaatccg aattagtaaa gcgaactgta
     2401 acgatcaagt atgtgttcgg actggagcaa ttgataaaca aggcgataca gttgtttgtc
     2461 ttccacataa gttagtaatt gaagtaaaag cgagtgacgg gagttcaggc gattcagatg
     2521 atccgattat ctcttcctga ccttatcctc caatagatag gaaagtgttt ctatgacaaa
     2581 aaacagacga ttagtatata ttgcacttct ggctgctcaa gcggttgtca ttagtttact
     2641 cgagcgggct attccgtttc catttgcgtt tgctcctggg gcgaaactag gtcttgctaa
     2701 tattattacg tgtatttcgc tttatacatt atcggcaaaa gatactttta tgattatctg
     2761 cattcggtta gttttatcca ctttgcttgg tgggacaatt tcgaccttta tgtatagcgc
     2821 ggccggagct atcttaagtt ttcttgggat gtggctcgta caacaacttg ggccgaaacg
     2881 cgtgagcatc attggcgtta gtgttactgg tgggatttta cataacgttg gtcagctcgt
     2941 aattgctagt tggattgctg gtacttggtc cgttatgctt tatttgccag tattatcttt
     3001 catcggcatt ctttctggga tcgcggttgg gattgcagca aattacctac tgaaaaacgt
     3061 ccaaactttg cggatgttcg ctgatgctaa acaaagtcaa gcagcacaaa aataacttta
     3121 aaaaaaggag ttcaatatgc aacttcatgc tatgtgggat gagtatcctg cactttccaa
     3181 agatttacaa gaagtcttac aaacgattga aaaaaatatt caaattcgcg ataaacacgt
     3241 tgagcaaaac gtgaaagatt tgattcacgc tggtgggaaa ttactgcgcc ctgcttttgc
     3301 gcttctttct gcgcaagctg gtcctgatta tgataaagaa cgtgctgttt cgattgctgc
     3361 tgcgcttgaa gtacttcata tggcgacgtt gattcatgat gatgtcgttg atgattctcc
     3421 gttacgccgc gggatcccga caattcattc taaatatggt cgtaattatg ctgtttatac
     3481 aggcgattat ttattctgca tctgtttcaa aattttatcc gcacatgctt cttccgtgga
     3541 gaacattgaa tttaatagta aaaatatcga aaaaatctta atgggcgaac tagaccaaat
     3601 gcgcacaagc tacaaaatga atgtaactgt tcgtgaatat ttaacgcgta tttctggtaa
     3661 aacagcacaa ttatttgcac ttagttgtta ctctggcgca actggcagta aagcaacacg
     3721 catgacagtt gcaaaatgtt ataacatcgg acattacctt ggcatggctt tccaaattat
     3781 tgacgacgta ctggattaca caagtacgga tgaaggtctt ggcaaacccg ttttaaatga
     3841 tatgaaacaa ggtatttatt ctctgccact tatttatgca atgaaaggtc acttggctga
     3901 attcgagcca cttctttctc aaaaactaga tatgacggat gaagcttccg aacaagtttt
     3961 agcacttatt tctaagtata aaggtgtcga acaggcattc aaacttgcca acaaatatac
     4021 gaataaagcg cttcgtgaaa tcaaaaaact accagctggc gcgtatcgtg atgatatgta
     4081 ccgcttgacg aaaaatattt tagatcgaga tatctaaacc gtttagaaca ttgctccttc
     4141 catattgagt tttgttctaa attttggaac ttattgtgaa aatacaaaca tgaaagcgtg
     4201 attaacgtga ttcgattttt taaaatagtt acaccgatac tcctatctat ctctttagtt
     4261 gcttgtagtt ccgcaagtgg aaaaacagag aacattactg cgccaattga gaaagaccgt
     4321 aatttatcga tggtcgtaac gacggatgtt cattactttg cgccatcact aaccgacaac
     4381 ggaaaagcct ttgaaaaata tgtggctgcg ggtgatggga aacagttagc ttatagcgat
     4441 gaaataaccg atgctttttt ggcggatgta gaggctaaaa aaacagacgt ccttattatt
     4501 agtggcgacc ttacgaacaa cggtgaaaaa acaagtcatg aagagttagc caaaaaactt
     4561 actcaagtag agaaaactgg gacgcaggtt tttgttgttc cgggtaatca tgacattaac
     4621 aacccttggg cccgcaaatt tgaaaaagat aagcagttac caaccgacac tatatcacca
     4681 actgatttca gtaaaattta tggtgatttt ggatataaag atgctatttc aagtgatgag
     4741 ttttcgctga gttatttagc agctccttct tccaaagtat ggctgttaat gttagacacg
     4801 gctatttata aaacaaatat gcagcaagga actccgacaa cagaaggtgg actaacagct
     4861 ggaacactag attggataaa agaaagcagt gcgcttgcaa agaaaaacgg cgctaaactt
     4921 gtccctgttt tgcatcataa tttaactgat cataatgatg ttattcaaaa aggttatact
     4981 attaattata atcaacaagt aattgatgcg cttacggaag gctctatgga tttttctcta
     5041 agtggccata ttcatacgca aaatatccgc tctgcgaaaa gcacagatgg caaagaaatt
     5101 accgatatcg taaccaatgc tctttctgtt ttcccgcata aatatggcaa tattacttat
     5161 agtgccaaaa acaaaaactt cacgtatcaa tctcaaaagt tagatatgga agcttgggca
     5221 aaagcgcaag gctctacgga tgaaaacttg cttaatttta atcaatttga ttacgaaact
     5281 ttttataata gtggctacga taaggcaatg atggatttaa tgaccgatga atcttatgat
     5341 aagtacaacc aagcggataa ggaaaaaatg gcagatacga tgggattaaa taacatgtat
     5401 ttcttcgccg gaactgcccc tccaaaatct gatggtatgg ctttatggga ttctgcaccg
     5461 aattcatttt tgaaagatta cgttttaagt tcatccaatc cgcctaagaa aagtaatgac
     5521 tattatgtta gtccttaaat cataaaaaaa ctggtagccg ttatggctta ccagtttttt
     5581 tgtattaact agatgcggct gccgcactcg ctgctgcagc tgcactcacc gcagctgctt
     5641 gttccattgc aatcaatata tgcacattga ccattaaccc ttctaattgt tccttactca
     5701 tttgacctga ttgtttttcc gtatataggc ttattgctag agctgtaacg aattctcgtc
     5761 cgaaacgcaa gcctggttgt tgctgtaatt catcaattaa gttcactaac cctgaatcga
     5821 tttttcgcgc gtccatgaca aaagctaaaa tcccaatact tgagtaatgt agcggtttta
     5881 cttttatccc tttttgtcgt agttcttcta caatattatc tactcttcga atgaatttgc
     5941 tatctttttc accgtacaaa agtgtccctg ttgttgctaa aaattgtaag ctatcatttt
     6001 tgcggaaacc tttcgcggcg aactcttgaa aatagtactc tgttatttca gccaatttcg
     6061 tggtattttc ttcaggaaga tttgctaaga aaacagctgt tgtcacatct tcacttttag
     6121 ttaaaaatgg atggtctttt ttgaaaagtt ggtgaatagt tttcgctttt tgggctgtct
     6181 ttttgggatt ttctgattct agtaataaat atgctgcaaa ataagtgtat tctgtgcgct
     6241 ggaatcccgc ttggatcaat gtattataat tagcaattac ttgctggacg ctctctcggc
     6301 tggcattatc gttcgccatg agcaatccta ccaaggatgc gcgaacattt ccgtttagtg
     6361 cagtgaacat gcctagttgt cgtttaattt ctttattt
//
LOCUS       DASDYO010000142         6331 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.142, whole genome shotgun sequence.
ACCESSION   DASDYO010000142 DASDYO010000000
VERSION     DASDYO010000142.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6331
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.142"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(18..1289)
                     /gene="rho"
                     /locus_tag="U0290_002624"
     CDS             complement(18..1289)
                     /gene="rho"
                     /locus_tag="U0290_002624"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription termination factor Rho"
                     /protein_id="HEM2302656.1"
                     /translation="MAKLSIAYLESLTIKEIYALAKEHKITYYSKLTKRELIFALLKS
                     NAEKEGFFFMEGVLEIIPNEGFGFLRPINYSSSSEDIYISASQIRRFELRTGDKVSGK
                     VRPPKENERYFGLLHVEAVNGENPEVAKERVHFPGLTPLYPDRQIHLETGKNPISTRT
                     IDLISPIGFGQRGLIVAPPKAGKTVLLKEIANAITTNHPESELIVLLIDERPEEVTDI
                     ERSVKADVVSSTFDEVPENHIKVAELVLERAMRLVEQKRDVVILMDSITRLARAYNLV
                     IPPSGRTLSGGIDPAAFHRPKRFFGAARNIEEGGSLTILATALVDTGSRMDDVIYEEF
                     KGTGNMELHLDRQLAERRVFPAIDMRRSGTRKEELLLSKERLEQLWKIRKAMPKQSDG
                     LDISERFVRYLKKTENNEAFYELLQEEMFKK"
     gene            complement(1394..2665)
                     /locus_tag="U0290_002625"
     CDS             complement(1394..2665)
                     /locus_tag="U0290_002625"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEM2302657.1"
                     /translation="MTDKLIIRGGKKLAGTLQVDGAKNSAVALIPAAILAESEVVLEG
                     LPDISDVHTLYNILEELGGTVRYDNKTAVIDPTDMISMPLPSGNVKKLRASYYLMGAM
                     LGRFKKAVIGLPGGCYLGPRPIDQHIKGFEALGAKVTNEQGAIYLRADELKGARIYLD
                     VVSVGATINIMLAAVRAKGKTVIENAAKEPEIIDVATLLTNMGAIIKGAGTDTIRITG
                     VEHLHGCHHTIIPDRIEAGTFMVLAAASGKGVRIENVIPTHLEGIIAKLTEMGVPMDI
                     EEDAIFVGEVEKIKKVDIKTYAYPGFPTDLQQPLTALLTRAEGSSVITDTIYPSRFKH
                     IAEIERMGGKFKLEGRSAVINGPVQLQGSKVTATDLRAGAALVIAALLADGETEIHGV
                     EHIERGYSKIIEKLSAIGANITRSSAAETKL"
     gene            complement(2782..3855)
                     /locus_tag="U0290_002626"
     CDS             complement(2782..3855)
                     /locus_tag="U0290_002626"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012580737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="flippase-like domain-containing protein"
                     /protein_id="HEM2302658.1"
                     /translation="MSGGAKKNLFNIAIVLAISIGFIIWQFQGVDISTFFASMLKVNP
                     WWLSAAFAAMFIYWFLEAVVLQTASKPANKDQRFFSSFRITMIGQFFNTITPMATGGQ
                     PAQLVMLTKQGMDAGRGSSVLLVKFIIYQAMVVLNFLVILIFGIHYLMTGVTQLKFLV
                     LLGFGVHVIVIAALILVGRSQKFTTKLVHVLLIPTRLFMKKEKVSNLRNTLDEKIITF
                     HEESSRIGKDWKLIVRCCFYTTLQLWIYFSIPFFILQAIGVTGIGLYMAITYHAFIIM
                     FATVMPTPGGAGGAEYTFTLLFGMLLGPAKLLMALVLWRIITYYSCIVFGAGALLIKD
                     TASKKIKPRIKALAKAPAKNIPQ"
     gene            complement(3862..4887)
                     /locus_tag="U0290_002627"
     CDS             complement(3862..4887)
                     /locus_tag="U0290_002627"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM2302659.1"
                     /translation="MIKLTMLSSAEKVKGQGVASAYRELVNLLEERYKNEIDMKINSF
                     EKSDITHYHTVDFRFFLSTFFKKKRGVRVGYVHFLPETMEGSLKLPWIARVVFYKYLI
                     GFYKRMDEIVVVNPSFIPKLTAYNIPAEKIHYIPNFVSKKSFFPISKGEKELARAKYE
                     IPADKFTVIGIGQVQHRKGVLDFIEVAKQLPDVQFVWAGGFSFGKITSGYEELKKIYD
                     NPPSNVKFIGIVDRSEMNSCINMADVFFMPSYNELFPMAILEAMSCDVPILLRNLDLY
                     EEILDGYYVKEVDNPGFIRAIERLENDTNYYNEMLQASKRGAAYYSEDRLAEIWLDFY
                     QGLLTKE"
     gene            complement(4880..6163)
                     /locus_tag="U0290_002628"
     CDS             complement(4880..6163)
                     /locus_tag="U0290_002628"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 4 protein"
                     /protein_id="HEM2302660.1"
                     /translation="MNIGIFTDTYSPQISGVATSIMIMENELRKQGHTVYIFTTTDPN
                     ADRESEEGRVFRLPSIPFVFFPERRVAIAGMNKFIKLVGRLDLDIIHTHTEFSLGLLG
                     KRIAKKYHIPSIHTYHTMYVDYLHYIAKGKILTPSMVGKMTKSFCDSYDAIITPTAKV
                     RHHLEEQGIHKLMYTVPTGTDISSFAPVEKQRILNLKKLLGIGENDPVILSLGRIAHE
                     KNIDAIINAMPEVLQTKTTAKLVIVGDGPVRKDLEKLVEEKQLADHVIFTGAVDWENI
                     SLYYQLGDLFVSASTTETQGLTYAEAMAASLPVVAKRDESIEGFLSDRETAFLFNEDD
                     ELASLLINILSDKNTATLVATNGRVKVESISADQFGINIESTYNEVREIYRVKRQNGT
                     IKVKPTLIKSKIASQVFSLSSSTHVQRKERSSRRD"
BASE COUNT         1880 a         1334 c         1070 g         2047 t
ORIGIN      
        1 tatgtgaaat ttttgattta ttttttaaac atctcttctt gtagtaactc ataaaaagct
       61 tcattattct ccgttttctt caaataacgt acaaatcgtt ctgaaatatc tagtccatcg
      121 ctttgtttcg gcatcgcttt gcggattttc cagagttgtt caagacgctc tttggatagt
      181 agtaattctt cttttcttgt gccggagcga cgcatatcga tagcaggaaa aacgcgacgt
      241 tctgcaagtt ggcgatcaag atgtaactcc atgttgcctg tccctttgaa ttcttcgtaa
      301 ataacatcgt ccattcgaga acccgtgtca actaatgctg tggcaagaat ggttaagctt
      361 ccaccctctt caatattacg agcagctcca aagaagcgct tcggtctatg gaatgcagca
      421 ggatcaatcc cccctgaaag tgttcgacca cttggcggaa tcactaggtt ataggccctc
      481 gcaagtcgcg taatactatc cattaaaatg accacatcgc gtttttgttc tactaaacgc
      541 atcgctcgtt caagaaccag ttctgctact ttaatgtgat tttcaggtac ctcatcaaat
      601 gtggaactga caacatcggc ctttacagaa cgttcgatat cagttacttc ttccggacgc
      661 tcatcaatta acaagacaat caattctgac tctggatgat tagtagtaat cgcgttcgca
      721 atttctttaa gtaataccgt tttacctgct tttggtggag ctacaataag tccgcgttga
      781 ccaaaaccaa ttggtgaaat caaatcaatc gttcttgtgg aaataggatt tttgcctgtt
      841 tctaaatgaa tttgacgatc tggataaagc ggtgttagtc ctgggaaatg cactctttct
      901 ttagccactt caggattttc tccattgaca gcctcaacat ggagtaagcc aaagtaacgt
      961 tcattttctt tcggaggacg aacttttcca gaaaccttat ccccagttct taactcgaaa
     1021 cgtctaattt gggaagcaga gatgtaaata tcttccgaac tagatgaata gttgataggg
     1081 cgtaagaagc caaaaccttc atttggaata atttctaata caccttccat gaagaaaaat
     1141 ccttcttttt ctgcgtttga ttttaataaa gcaaaaatca attctcgttt tgttaattta
     1201 ctatagtaag taattttgtg ttcttttgct aaggcatata tctctttgat tgttaaactt
     1261 tctaagtatg caatggacag tttagccata tatgtaccac ctttttgagt taataaatag
     1321 tatttaggaa taaatgataa tggagggatt tagagggaag gctgaaacga cttgattcgt
     1381 tcagcctcat tttttataat tttgtttctg ctgcgctact acgagtaata tttgcgccaa
     1441 tagcagataa tttttcaata atcttactgt aaccacgttc gatatgttcc accccgtgaa
     1501 tttcagtttc tccgtcagct aaaagtgctg caattacaag cgctgcaccg gcgcgtaaat
     1561 ctgtcgctgt cactttagaa ccttgaagtt gcacaggacc atttatgaca gccgaacgac
     1621 cttcaagttt aaacttaccg cccattcgtt caatctccgc aatgtgttta aaacggcttg
     1681 gataaattgt atcagtgatg acactactac cttccgcacg tgttaaaaga gcagttaacg
     1741 gttgttgtaa gtccgttggg aagcctggat aagcgtaagt tttaatatct acttttttta
     1801 ttttttctac ttccccaaca aaaatagcat cttcttcgat atccattgga acgcccattt
     1861 ctgtgagctt tgcaatgatt ccttctaaat gggtaggaat aacattttcg attcgtactc
     1921 ccttcccaga agctgctgca agtaccatga atgtccctgc ttcgattcgg tctggaataa
     1981 ttgtatgatg acaaccatgt aaatgctcta ccccagtgat tcgaatagta tcagttcctg
     2041 cacctttaat aattgctccc atatttgtta aaagcgttgc aacatcaata atttctggct
     2101 cttttgctgc attttcgata accgtttttc cttttgcacg aacagccgct agcatgatat
     2161 tgattgtcgc tccaacactt acaacatcta aataaatccg tgcacctttg agttcatcgg
     2221 cacgcaaata aatcgcacct tgctcgttcg ttacttttgc gcctaatgct tcaaaacctt
     2281 ttatatgttg gtcgattgga cgtggcccta agtaacaacc gcctggaagt ccaataaccg
     2341 cttttttaaa tcggcctaac attgcaccca ttaaataata ggacgcacgt aatttcttca
     2401 catttcccga tggaagtggc atagaaatca tatctgttgg atcaataact gctgttttat
     2461 tatcatagcg aaccgtgccg ccaagctctt ctaaaatatt ataaagtgtg tgaacatccg
     2521 aaatatctgg taaaccttct aaaaccactt cagactccgc caaaattgcc gctggaatta
     2581 atgccaccgc actatttttt gcgccatcca cttgcaaagt accagctaat tttttaccgc
     2641 ctcgaataat caatttatcc gtcacaaatg tacccttctt tcttgaagca tgtaatactg
     2701 tttcattatc cattaatttg ttttactttg caagaaatgc tttccctaaa aagctgggaa
     2761 cattacgtcc caagctttta atcattgtgg tatatttttg gctggtgctt ttgcgagtgc
     2821 tttgatacgc ggtttaattt ttttcgaagc tgtatctttt attaataatg cgcccgcccc
     2881 gaaaacgatg cagctataat aagtaataat ccgccataaa acaagtgcca ttaggagttt
     2941 tgccggaccg agtaacatac cgaataacaa agtgaaagta tactcagctc ccccagcccc
     3001 acccggcgtt ggcatgactg tcgcaaacat aataataaaa gcatgatacg taatcgccat
     3061 atacaggcca attcctgtca caccaatcgc ttgtaaaata aagaaaggga ttgagaagta
     3121 aatccaaagt tgcaacgttg tataaaaaca acaacgaaca attaatttcc aatctttacc
     3181 aattcggcta ctttcttcat ggaaagtaat aattttctca tctaatgtat ttcttaaatt
     3241 agaaactttt tcttttttca taaataaacg tgttggtata agtaaaacgt gcactaattt
     3301 tgtcgtgaac ttttggcttc ttcctactaa aataagcgca gcgatgacaa taacatgcac
     3361 accaaaccct agtaaaacaa ggaatttcaa ttgtgtcacg ccagtcatta aataatgaat
     3421 accaaaaatc aagataacta aaaagttcag tacgaccatc gcttggtaaa taatgaattt
     3481 tacaagtaag actgaacttc ctcgccccgc atccatgcct tgcttcgtca acataacgag
     3541 ttgcgcaggc tgtccgccag tcgccattgg agtaatggta ttaaaaaatt ggccaatcat
     3601 tgtaatccgg aatgacgaaa aaaaacgttg gtccttattc gctggtttag atgcagtttg
     3661 taaaacaacc gcttctaaaa accaataaat aaacattgca gcaaaggcag ccgagagcca
     3721 ccaagggttc acttttaaca tcgaagcaaa aaaagtggag atatctacgc cttgaaattg
     3781 ccaaataatg aagccgatgc taatggctaa tacaatcgca atattaaata ggtttttctt
     3841 tgcgcctcca ctcattacct ttcactcctt cgttaataat ccttgataaa agtccaacca
     3901 tatttcagcc agtcgatcct ctgaataata agccgctcct cgttttgatg cttgtaacat
     3961 ttcattataa taatttgtat cattttctaa acgttcgata gccctaataa aaccagggtt
     4021 atctacttct tttacataat agccatctaa aatttcttca tacagatcta aatttcgtaa
     4081 taatatcgga acatcacaac tcatcgcttc caaaatcgcc attggaaata attcgttgta
     4141 agatggcata aagaacacat ctgccatatt aatacatgaa ttcatttcag aacgatccac
     4201 aattccaatg aatttcacat tacttggtgg attatcatag attttcttca attcctcgta
     4261 gccagaagtg attttaccaa aagaaaatcc gcctgcccaa acaaattgaa catcaggaag
     4321 ttgtttagca acctcaataa aatcaagcac acctttacga tgttgcactt gaccaattcc
     4381 aatcacggta aatttatccg ccggaatttc atattttgcc cgagcaagtt ctttttctcc
     4441 ttttgaaatg gggaaaaagc tcttttttga aacgaaattc gggatataat gaattttttc
     4501 tgctggaata ttataagccg taagtttggg aataaaagag ggatttacaa caacaatctc
     4561 atccattcgt ttataaaaac caatcaaata tttatagaaa actacgcggg caatccaagg
     4621 taatttgagg ctcccttcca ttgtttcggg taaaaaatgg acatatccga cccgaacgcc
     4681 tcgtttcttc ttaaaaaaag tcgaaagaaa aaaacggaaa tcaacggtat ggtaatgcgt
     4741 gatatccgat ttctcaaaac tattaatctt catatcaatt tcattcttat atcgttcttc
     4801 tagcaaattc acaagttcgc ggtaagctga tgccacaccc tgacctttta ctttttctgc
     4861 cgaagatagc attgtcaact taatcacgcc gcgatgacct ctctttcctt tgaacgtgtg
     4921 tagaagatga tagtgaaaat acttgtgaag ctattttact ttttatcagc gtgggcttta
     4981 ctttaatcgt cccattttgg cgctttactc ggtatatttc acgaacttca ttgtatgtag
     5041 attcaatgtt gattccaaat tgatccgcag aaatggattc cacttttact cggccattcg
     5101 tagcgaccaa tgtggctgta tttttgtctg aaagtatatt tattaacagt gatgcaagct
     5161 catcatcttc attgaataaa aaggctgttt ctctgtcgct taaaaagcct tcaatacttt
     5221 catcacgttt ggcaacaact ggtaaagaag cggccattgc ttctgcataa gtcaaacctt
     5281 gtgtttctgt cgttgaagca ctcacaaaca gatcccctaa ttgataatat aaactaatat
     5341 tttcccagtc tactgcacca gtgaaaataa catgatctgc taattgtttt tcttctacta
     5401 atttttctaa gtctttgcgc acaggaccat cgccaacaat aaccaatttg gctgtggttt
     5461 tggtttgaag gacttctggc attgcattaa taatcgcatc gatatttttt tcatgcgcaa
     5521 ttcttccaag tgatagtatc actggatcat tttctccaat accaagtagt ttcttcaagt
     5581 ttagaattcg ctgtttttca actggcgcga acgatgaaat atctgtgcct gttggaacag
     5641 tgtacattaa tttgtggata ccttgctctt ctaagtgatg ccttactttt gcagttggag
     5701 tgattatggc atcatagcta tcacagaacg attttgtcat tttacccacc atagaaggtg
     5761 tcaaaatttt acctttcgca atataatgca agtaatcgac atacattgtg tggtaggtat
     5821 ggatagatgg aatatgatat tttttagcaa ttcgcttacc taatagacct aatgaaaact
     5881 ccgtatgtgt gtgaattata tctaaatcca agcgccctac tagcttaata aacttattca
     5941 ttccagcaat tgctacgcga cgttctggga aaaagacaaa cggaatactt ggtaaacgaa
     6001 acacacggcc ctcttcgctc tctctatcag cgtttgggtc ggttgttgta aatatataca
     6061 cagtgtgccc ttgttttctt agttcgtttt ccataatcat tatcgatgta gctacaccgc
     6121 taatttgcgg actgtaggta tccgtaaaaa tccctatatt cattactatc gcctactctc
     6181 ttcctcgttg gttcattcat catttaatat attattataa cataactata gtaagtcgta
     6241 tcacataact aactacatta tggctcattt atttagataa aacatgcgcc tgaagcatga
     6301 ttttttatcg ggaaatttag attgattcag t
//
LOCUS       DASDYO010000143         6313 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.143, whole genome shotgun sequence.
ACCESSION   DASDYO010000143 DASDYO010000000
VERSION     DASDYO010000143.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6313)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6313)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6313
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.143"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            15..293
                     /locus_tag="U0290_002629"
     CDS             15..293
                     /locus_tag="U0290_002629"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724366.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3116 family protein"
                     /protein_id="HEM2302661.1"
                     /translation="MDEPTKAVIYQILSKTEEQNATMDHLVFEMMQFPGAAAFTKNEL
                     LFGIYWLETYHYIFRMNENQKTRYYRTEKGHEKLAELELLKKNSKKTT"
     gene            complement(321..764)
                     /locus_tag="U0290_002630"
     CDS             complement(321..764)
                     /locus_tag="U0290_002630"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464151.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302662.1"
                     /translation="MTASDLEDFLSTAITDYANEKVEAGTWDEEEALAKSQDSFNKLL
                     YDGITTPNEYLYSIISGEKIGYIWFHVDETRSGKHAFIYDFVIFEAFRGKGFGTKTLE
                     ALDALAKEMQITKIELHVFAHNQTAIGLYNKVGFQNTDITMAKYL"
     gene            complement(795..1496)
                     /locus_tag="U0290_002631"
     CDS             complement(795..1496)
                     /locus_tag="U0290_002631"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464152.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SGNH/GDSL hydrolase family protein"
                     /protein_id="HEM2302663.1"
                     /translation="MKKTIQSVGVWGDSIMKGVLFNPEKNRYTLLKNNCIKRASEKLG
                     LTFQNHSTMGRTITKGHEILTKDLAKDATNDIAIIEFGGNDCDFNWTEVSENPTAEHI
                     PSTPLNIFETQLLEMIARLKKLDIKPILMTLPPLHAKRYFDFITRNGLNKDNILQFLG
                     GDVEMIYRWQERYSNTISRIAAETGSHIIDVRDSFLAEFHYENLLCADGIHPNEAGHI
                     AMSRKFIQYASFHKA"
     gene            complement(1581..3260)
                     /locus_tag="U0290_002632"
     CDS             complement(1581..3260)
                     /locus_tag="U0290_002632"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958777.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302664.1"
                     /translation="MWKKHKWLIIAVLLLVIYVAPLFILGGNSHVRIHDNLDSNVTWY
                     KMVLDSGDYTAKVGTANIDQIMDDSVPRDSFDSEFVGIDWLYMIFSTPIAFAMSQLIT
                     RVFAFLGLFLWARDYLIKDKKYLVPLYFVSLAFALTPFWPSGMLSTLGMPLALWAFLN
                     IRNNKRRIWNVVILTLLPFYSSLILGFCFFLVMVGCIWLYDVFKKKQVNIRFLLSMLY
                     MTLLYALVNYRFIYAMFLHPEPDSRSEFSLPELSFLSSIRLSFKNFIIGHTHDQALAG
                     FVIIPVLLLVLALIIIKREWGKEKLFLWLFGFNLFLSFWYGFWWYRGWNVIKEHVEIM
                     RTFNFSRFHFLQPFLFYGLFALAIVYLIKKGNWWRKLAYVVVALQLVVVFANNSEIYY
                     RTGNGSPSINQFYATEQMEEIKDYIGKPQSSYRVGSIGLHPSVSQESGFYTVDGYVNS
                     YPLAYKRAFRKIIAGELDKSPVLEDYYDNWGNRCYIFSAELGKKYDFGKDSKKHIKQL
                     DFNSEAFKKVGGEYILSAVPIDNASEVGLQFEKAFDNKDSYWKIYLYKATK"
     gene            3563..>6313
                     /locus_tag="U0290_002633"
     CDS             3563..>6313
                     /locus_tag="U0290_002633"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan bound protein"
                     /protein_id="HEM2302665.1"
                     /translation="MLKHNWQKVFVVMVAVALIFQLVPWSNIFAGAEENQTKTTQQIA
                     QSDEQKGADENKTTVTSDNRETTKNLVNGKQLLKGSVDWNFTNKVTDANGNTKQTYAP
                     GDSLKFSISLAIPSYSESVLDETYTFWIQKDFFQGDKVTFVNPAIDGLTPRQNVFTDD
                     SMKNSIGTKTINGVEYIGYTLKFNQSPEALAKYEDEPLTNAKFDMFATINTTITTKDD
                     YKAIVIEDDKDVDISNIEVPVTPPTPDTDNGVLTASKAIDSAWRLDKDTGKYLKVATS
                     STNYTPEKDDLVFYYVYATNNSAENAVLEKMVDELPAGFSIITEGSPEWQALSTASGS
                     SLQRGWVASADQTNLAPGATRYELPFSPAQTISKNGGGIYKTIAAKVTDPTKDLTNVT
                     KSPTKGGEGKSGSVTPSGKDVYDMAITTKISSTYDKNNKYIGAVSSTTTPVSISEGST
                     VGVTYTAINQGNYTKDVVVYAYVPAGYELNNDTSDFKTTNDKWKYETTVPSGGGVWSD
                     IKVYSITLSGGMASGATATATMYMKAIGMPDDGTYSAVDFYMAGEIGSFSNFNGDSTL
                     DGAITDVDSTPDMNPGNDLISNVDGSTVKPIDGFQKEKPHVVKENAKSTATLQDEDDF
                     DFDYVTFIKTPEVIPSEGKVFEKTRLSAADAEKTARNMIGSDIMGSALKDYTPLADDG
                     RITSPKTYMVYEMNINPSGVEDTLNSSFTDTLPKGLKMLEYDIAGLNSSNKHIYGFTT
                     NKFEGTPKFTNADGQDVIVYQKGLYSEKQVCIANPTLNDVGVRYFGNNADKMGVTGSV
                     TKDARTLTLNFGQPAADPMYSETKAAYKVYMIVVIDPDEIDYSSIMQNKATYTYNDKV
                     ITSYENSEMYWDAGGGTAYAKKYVLDNKTNAYLSGSQYNVATPDADGNLSVGYKIRVR
                     SAY"
BASE COUNT         2199 a         1166 c         1134 g         1814 t
ORIGIN      
        1 gggggattga tagaatggat gagccaacca aagcagtgat ctatcaaatt ttatctaaaa
       61 cagaagaaca aaatgcgacg atggatcatt tggttttcga aatgatgcaa ttccctggtg
      121 ccgcggcttt tactaagaat gaattgctgt ttggcattta ttggctagaa acgtatcatt
      181 atatttttcg aatgaatgaa aatcaaaaga cgagatatta ccgaacagaa aaagggcacg
      241 aaaaattagc agagctagaa cttttaaaaa agaatagtaa aaaaacaact tgattttccg
      301 ggaaatcaag ttgtttttta ttataaatat ttagccattg taatatcagt gttttgaaaa
      361 ccaactttat tatataagcc gatagctgtt tgattgtgcg caaatacatg tagttcgatt
      421 tttgtaattt gcatttcttt cgcaagcgca tctaatgctt ctaaagtttt tgttccgaat
      481 cctttaccac ggaatgcttc gaaaatcaca aaatcataaa tgaaagcatg tttaccagag
      541 cgagtttcgt ccacatggaa ccaaatataa ccgatttttt cgcctgagat aatgctgtag
      601 agatattcat ttggtgtagt aattccgtca tatagcaatt tgttgaaaga gtcttgggat
      661 ttagctaagg cttcttcttc atcccatgtg ccggcctcaa ctttttcatt tgcgtaatct
      721 gtaatggctg tagataaaaa atcttctaaa tcagaagcag tcatagtttg taaatgtaaa
      781 ataaaaattc ctccttatgc tttatgaaaa cttgcgtact gaatgaattt gcgtgacatg
      841 gcaatatgac cagcctcgtt tggatgaata ccgtcagcac agagcaaatt ttcataatga
      901 aattcagcga gaaaactatc acggacatca ataatatggc taccagtttc ggctgcgatg
      961 cgcgaaatcg tattgctata tcgttcttgc cagcgataaa tcatctctac atcgccacct
     1021 aaaaactgca aaatattatc tttatttagt ccatttctcg taatgaaatc aaaataacgt
     1081 tttgcatgaa ggggaggcaa tgtcattaaa atgggtttaa tatccagttt ttttagtcgt
     1141 gcaatcattt caagtaattg cgtttcaaaa atgttaagtg gggtgctagg aatgtgctca
     1201 gctgtcggat tttcggaaac ttccgtccag ttaaaatcac aatcatttcc gccaaattcg
     1261 ataatggcga tatcatttgt tgcatctttt gctaagtctt ttgttagaat ttcgtggcct
     1321 ttagtgattg tacgacccat tgtggaatga ttttgaaaag tcaggccaag tttttcggat
     1381 gctcgtttaa tgcagttgtt tttaagcaat gtatagcgat ttttttcagg gttgaaaaga
     1441 acgcctttca taatactatc gccccaaaca ccaactgact gaatggtttt cttcataatc
     1501 atcactcctt ttattaatca taccacaaaa aaagcgaaag gcgcgattag ttcgttaaga
     1561 aaaaatcacg cctcacgctt ttatttagtt gctttgtata aatagatttt ccagtaagaa
     1621 tccttattat cgaaggcttt ttcgaactgg agtccgactt ctgaagcatt atcaatcgga
     1681 acggctgata gaatatactc gccgccaacc tttttaaatg cctctgaatt aaaatctaac
     1741 tgtttaatgt gttttttcga atccttgccg aaatcgtatt ttttacctaa ttcggcagaa
     1801 aatatataac aacgattacc ccaattatca taataatctt ctaaaacagg actcttgtct
     1861 agctcaccag caataatttt tcggaaagcc cttttataag caagaggata ggaattcaca
     1921 tagccatcga cagtataaaa gccactttct tgggaaacag acgggtgcag accaatactt
     1981 ccgacacggt aacttgactg cggtttacca atataatctt taatttcttc catttgctcc
     2041 gtggcgtaaa attgattaat gcttggcgag ccatttccag tgcggtagta aatctcagag
     2101 ttattagcga aaacaacaac aagctgcagc gcaactacca cataagctaa ctttcgccac
     2161 caatttcctt tttttattaa ataaacaatc gcaagtgcaa acagtccata aaataaaaac
     2221 ggttgtaaaa aatggaagcg cgaaaagtta aatgtccgca tgatttccac gtgttctttg
     2281 attacattcc aaccacgata ccaccaaaat ccataccaaa aagataagaa taaattaaag
     2341 ccaaatagcc ataaaaacag tttttctttg ccccattcac gtttgataat aatgagtgca
     2401 agtacaagga gtaatacagg tataataaca aatccagcca gtgcctggtc atgcgtgtgt
     2461 cctataatga aatttttaaa gctaagtcgg atagaactta aaaatgataa ctctggtaga
     2521 ctaaattcgc tccttgaatc cggttcgggg tgcaaaaaca ttgcataaat aaaacgataa
     2581 tttacaagtg catacagaag cgtcatataa agcatgctaa gtaaaaatcg aatattcact
     2641 tgttttttct tgaaaacatc gtacaaccaa atacatccaa ccattactaa aaagaaacaa
     2701 aatcctaata ttaaactaga ataaaatgga agcaacgtca gtataaccac attccaaatt
     2761 cgccgtttat tattcctaat atttaaaaat gcccatagag caagcggcat tccaagcgta
     2821 ctcaacatcc ctgatggcca aaatggtgtt agcgcaaaag ctaaggaaac aaaataaagt
     2881 ggcacgagat attttttatc tttaataagg taatcccttg cccataaaaa taatcctaaa
     2941 aatgcaaata cacgtgtaat taactgactc atcgcaaagg caatgggtgt gctgaaaatc
     3001 atgtaaagcc aatcaatccc aacaaactct gaatcaaatg aatctctggg gacgctgtca
     3061 tccattattt gatctatatt tgctgtcccg actttagcgg tataatcccc gctatccaaa
     3121 accattttgt accaagttac attagaatcc aagttatcat gaatccttac atgactgttc
     3181 ccgccaagaa taaataatgg agcgacataa attaccaata ataatacagc aataattagc
     3241 cacttatgct ttttccacat agttctcctc cttcattatc tctactatat atgtacccga
     3301 gaaaactatt ttcaattata tcaaaggaaa ccaggtttgt tcattaaaaa aggtataatt
     3361 ttaacatttt tttacgtgtg attgaactgt aaatatggcg gaaacgtcac aattctcttt
     3421 actatatagg cagttttgtc tgattggctt gttccagaaa gccattttag cgagtatgat
     3481 acttttaaga aaactattca agtagaacaa aaaaagtcta ctatgagtaa tttcaataat
     3541 tagtagcaaa aggagaatta tcatgctaaa acacaactgg caaaaagtat tcgttgtaat
     3601 ggttgcggtt gcgcttattt ttcaattggt tccgtggtct aatatcttcg ccggagcaga
     3661 agaaaatcaa acaaaaacaa cccaacaaat agcacaatca gatgaacaaa aaggagcaga
     3721 tgaaaacaaa acaaccgtaa catctgacaa tagagagaca actaaaaatc tagttaatgg
     3781 aaagcaatta ctaaaaggct ctgttgactg gaattttaca aataaagtaa ctgacgcaaa
     3841 cgggaataca aaacaaactt atgcaccggg agactcactc aagttttcaa taagtttggc
     3901 aatcccatcc tattcagaat cagtattgga tgaaacttat acattttgga tacaaaaaga
     3961 cttctttcaa ggagacaaag taacatttgt taatccagca attgatggat taacaccgag
     4021 acaaaatgtt tttacagacg actccatgaa aaactcgatt ggaacaaaaa caataaatgg
     4081 tgtcgagtat attggttaca cgctcaaatt taaccaaagc ccagaagcct tggcaaaata
     4141 tgaagatgag ccgcttacta acgctaaatt tgatatgttt gcaacaataa atacgactat
     4201 tacaacgaaa gatgactata aagctattgt aattgaagat gataaagacg tagatattag
     4261 taatattgaa gtccccgtga caccaccaac tcccgataca gataatggtg tactcaccgc
     4321 gtctaaagca atcgattctg cttggcggtt agataaagac actggaaaat atcttaaagt
     4381 cgctacatca tctacaaact atacacctga aaaagatgat ctagttttct attatgtgta
     4441 tgctacgaac aattcagcgg aaaatgccgt tttagaaaaa atggtagatg aattaccagc
     4501 tggtttttcc attattacgg aaggctcacc agaatggcag gcgttatcaa ctgcatctgg
     4561 ctcttcgctt caacgcggct gggtagcttc agcagaccaa acaaaccttg cccctggcgc
     4621 aactaggtac gaattaccat tttccccagc tcagacaatc tccaaaaatg gtggcggtat
     4681 ttataaaacg atcgcagcaa aagtaacaga tccaacgaaa gatttgacta atgttactaa
     4741 aagcccaact aaaggcggcg aaggtaaatc tggttctgta acgccaagtg ggaaagatgt
     4801 ttatgacatg gcaattacga caaaaattag ttccacttac gataaaaaca ataaatatat
     4861 tggtgctgtt agtagcacaa ctacgcccgt ttctatatca gaaggaagca cagttggcgt
     4921 aacatataca gcgattaatc aagggaatta tacaaaagat gttgtcgttt atgcctatgt
     4981 accagcaggt tatgaactaa ataatgatac atctgatttc aaaactacga atgataaatg
     5041 gaaatacgaa acaaccgtac ctagtggtgg cggtgtgtgg agtgatatca aagtttactc
     5101 cattacactt tctggaggca tggcatcagg tgcaactgca actgcgacca tgtacatgaa
     5161 agctatcggc atgccagatg atgggactta tagcgcagta gacttttaca tggctggaga
     5221 aatcggttca ttttctaact ttaatggtga ttctacttta gacggagcaa ttaccgatgt
     5281 agattcgacg ccagatatga atccaggaaa tgatctgatt agcaatgttg atggttctac
     5341 tgtaaaacct attgatggct tccaaaaaga aaaaccccat gttgtaaaag aaaatgctaa
     5401 atcaacagcg actttacaag atgaagatga tttcgatttt gattatgtta cgttcattaa
     5461 aacaccagaa gtaattccat cagaaggaaa agtgtttgaa aaaacacgtc tatcagcagc
     5521 tgatgcagaa aaaacagcgc gcaatatgat aggtagcgac atcatgggtt ctgccttgaa
     5581 agactatacg cctcttgccg acgatggtag aattacttca ccaaaaacat atatggtcta
     5641 tgaaatgaac attaacccat ctggagtaga agacacacta aattcttcgt tcacagatac
     5701 acttccaaaa ggattgaaaa tgcttgaata tgatattgct ggtttaaatt ctagcaataa
     5761 acacatttat ggttttacaa cgaacaaatt tgaaggtaca ccgaaattca caaatgcaga
     5821 cggacaagat gttattgttt atcaaaaagg cttatattcc gagaaacaag tttgtattgc
     5881 caaccctact ttaaatgacg ttggagtaag gtatttcgga aataacgcgg ataaaatggg
     5941 tgtaactggt tccgtaacaa aagatgcacg tacactaacc cttaattttg gacaaccggc
     6001 agctgacccg atgtatagtg aaacaaaagc agcttataaa gtgtatatga ttgtggtaat
     6061 tgatccagac gaaattgact acagcagtat catgcaaaat aaagcaacat acacttacaa
     6121 cgataaagtt attacttctt atgaaaatag cgaaatgtac tgggatgctg gtggcggtac
     6181 ggcctatgcg aaaaaatatg ttttagataa taaaacaaat gcatatttaa gtggaagcca
     6241 atataatgta gctactcctg atgcagacgg taatttgtca gttggctata aaattcgagt
     6301 aagaagtgcc tat
//
LOCUS       DASDYO010000144         6274 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.144, whole genome shotgun sequence.
ACCESSION   DASDYO010000144 DASDYO010000000
VERSION     DASDYO010000144.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6274)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6274)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6274
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.144"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     regulatory      22..124
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00162"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="SAM riboswitch class I; Derived by automated
                     computational analysis using gene prediction method:
                     cmsearch."
                     /bound_moiety="S-adenosylmethionine"
                     /db_xref="RFAM:RF00162"
     gene            211..1785
                     /locus_tag="U0290_002634"
     CDS             211..1785
                     /locus_tag="U0290_002634"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463668.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2302666.1"
                     /translation="MKKFLLVAVISVFALVLTACGGSGASSDKANGSGKAKDGGSLII
                     GVTGDPEVINPNYASDRVTLTIQQAVYAPLFWEVDGKPALAKSLDISDDNLTYTVKLK
                     DGLTWHDGKPLTADDVVFTVNSILDTKQNSPNRGNFVFDDKPVKVEAVDDTTVKFTLP
                     TVAPAFENTIKTFFPIPKHIFEGVENIEKSDKNKNPIGSGPYKFVEYKTGEYVSLERF
                     NDYFDGKPKLDKVTFRITKDQNAANLALQNGEINLKSIQPSDRNKVEKASAVNIITYP
                     ENRLSYATFNENQPALKSKELRQALSYALDREEIIDAAYGSDEYAKPASSFLTENTKY
                     FTDKVETYDQDIAKAKKLVKESGFDTSQKLTVYYLNNSKSQESIALYLQQQYKEIGVT
                     LDLKPTDPNALSNITLDRKNADYSIALNGYIMGNDPDAYKSLYLSDAPYNYSNYHNKD
                     LDALWEKGAVTADDKERQEIYEKIQNTIADDAVIYPISYDNAVLALDSRYGGQKAATP
                     QPVTMFRDLSKLYLTE"
     gene            1887..2837
                     /locus_tag="U0290_002635"
     CDS             1887..2837
                     /locus_tag="U0290_002635"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463669.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302667.1"
                     /translation="MLKTIIKRVLQIIPMLFIISIISFALIKLAPGDPVNSFVTPDMN
                     PDDVERIRQSLGLDQPIYVQYFIWLGNLLQGNLGYSIVNSQPVLQQILERIPATLGLV
                     GTSLVLTLLLSIPLGLVAANYENTWIDKVLNGISYIGISIPIFWFGMILIDVFSIQLG
                     WLPSLGMRTIGVDSFWDMAEHAILPVITLTFQGCAAYYRYVRSNTINQLKEEYVLFGY
                     AKGLSKVQIMGHHVLKNSLLPVITLLGMSLPQVITGAFITESIFSWPGMGSLGINAIF
                     QLDYPVIMAITLFSALLLIIGNLLADLAYMIVDPRIREMG"
     gene            2848..3741
                     /locus_tag="U0290_002636"
     CDS             2848..3741
                     /locus_tag="U0290_002636"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463670.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302668.1"
                     /translation="MRLDFSKKTMQDFERDAEVVHATRERSFWRFMLADRRAVFATSV
                     LILITVACIFAFLSPYDPNALSVQDKLMPPNSSHWFGTDDHGRDYLTRVLYGGRVSLL
                     VGVFAMMIAVVVGTLAGTVSGYFGGFIDNMVMRFLDIFMSIPSFFLLMILNAYLKPGI
                     SNIIIIIGLLSWMEVARIVRAETLTLKEREFILYSKSSGGGFFHIMFKHIIPNAMPSI
                     VVAASLNVATAILTESALSFLGLGVQQPNASWGSMLNNAQGYVGEATYLALFPGLLIL
                     MTILSFNVLGDVLRKGLSRRY"
     gene            3941..4225
                     /locus_tag="U0290_002637"
     CDS             3941..4225
                     /locus_tag="U0290_002637"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463671.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3130 domain-containing protein"
                     /protein_id="HEM2302669.1"
                     /translation="MSEIKVKEATLKKHATKLESKGKSTEYLPMKGGNMAYSQANSIN
                     HFRTALFDLVDAVDNFQGVVGTDAKRLKELGVSFTRKDQELERGMGLGGK"
     gene            4226..4594
                     /locus_tag="U0290_002638"
     CDS             4226..4594
                     /locus_tag="U0290_002638"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463672.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA double-strand break repair Rad50 ATPase"
                     /protein_id="HEM2302670.1"
                     /translation="MDAKSQQMETQLQLLKKEQSAAEDFLQDLQRQQNEQEWLAEDFA
                     RVHQEERESLELLREVWQGAESRSFGYYLADLQEEEKQKWHKKIQANQEEHQQKITAC
                     QNNIYQLENQQQDLQKELLQ"
     gene            4591..5898
                     /locus_tag="U0290_002639"
                     /pseudo
     CDS             4591..5898
                     /locus_tag="U0290_002639"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_020246390.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="LXG domain-containing protein"
     gene            5908..6150
                     /locus_tag="U0290_002640"
     CDS             5908..6150
                     /locus_tag="U0290_002640"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463674.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1871 family protein"
                     /protein_id="HEM2302671.1"
                     /translation="MYEKVEKIINDWDPIELFPLAPKDEYSQEINKIISIVQENHNID
                     MNVLAKGIRKIFIDSFGENLIFKNNEDEIAEKILAL"
BASE COUNT         2124 a         1107 c         1330 g         1713 t
ORIGIN      
        1 taggaataat agtattacgt tttcttatca agagcggtgg agggaatcgg cccagtgaag
       61 cccagcagcg gagcgcaagt tctatgctaa ttccgatcag aagtaatatt ctggcagata
      121 agtagtagct tttaatgagg cgcttcgatt ctgaccaaaa aacagaggaa gcgttatttt
      181 ttagcgctta aagaggggag tttttgttag atgaagaaat ttttattagt agcggttatc
      241 tcggtttttg ccttggtgtt aacggcttgc ggaggctctg gcgctagttc agacaaagca
      301 aatggttcag gcaaagcgaa agacggcggc tctctaatta tcggcgttac tggggatcca
      361 gaagttatca atccgaacta cgcttctgac cgtgtaacat taacgattca acaagctgtt
      421 tacgcaccgc tattttggga agttgacggg aaaccggcac ttgcaaaaag cttagatatt
      481 tcagatgaca acttaactta cactgtgaaa ctaaaagatg gtttaacttg gcacgacggc
      541 aaacctttaa ctgcagacga tgtagtattt actgtaaatt ctattttaga tacaaaacaa
      601 aacagcccga accgcggcaa ctttgttttt gacgataaac ctgtaaaagt agaagcagta
      661 gacgacacaa cggtgaaatt cactttacca actgttgctc cagcctttga aaatacaatt
      721 aaaactttct tcccaattcc aaaacacatt tttgaagggg tagaaaacat cgagaaaagt
      781 gataaaaaca aaaatccaat cggctcaggt ccgtacaaat ttgttgaata caaaacaggc
      841 gaatatgttt ccctagaacg attcaacgac tattttgacg gcaaaccaaa attggataaa
      901 gttactttcc gaatcacaaa agaccaaaac gctgctaatt tagcactgca aaatggcgaa
      961 atcaacctaa aatccattca accttctgat agaaacaaag tagaaaaagc gagcgcggta
     1021 aacattatca cttacccgga aaatcgctta agctatgcaa cattcaacga aaaccaacca
     1081 gcacttaaat caaaagaact tcgccaagcc ctttcttatg cgcttgatcg tgaagaaatc
     1141 attgatgctg catacggttc agatgaatac gcaaaaccag cttcctcgtt cctaacagaa
     1201 aacacaaaat atttcacgga taaagtagaa acatacgacc aagacattgc caaagcgaaa
     1261 aaattagtaa aagaaagtgg ttttgataca agtcaaaaac taactgttta ctatttaaac
     1321 aacagtaaat cacaagaaag tatcgcgctt tacttgcaac aacaatacaa agaaatcggc
     1381 gtgacacttg acttgaaacc aacagatcca aatgcactaa gcaacatcac acttgaccgc
     1441 aaaaacgcag actactctat cgcactaaat ggttatatca tggggaacga tcctgatgcg
     1501 tataaatccc tatacctaag cgatgcgcca tataactatt cgaactacca caacaaagat
     1561 ctagatgcac tttgggaaaa aggtgctgta actgcagacg ataaagaacg tcaagaaatc
     1621 tatgaaaaaa tccaaaacac cattgctgat gacgctgtaa tttatccaat ttcttatgat
     1681 aatgcagtgc tagctcttga tagccgttac ggtggtcaaa aagctgccac accacaacca
     1741 gtaaccatgt tccgtgatct ttctaaacta tatttaacgg aataataatt aaaaatcatt
     1801 cgtaaaaaat ctggcctgcc atgcttgttt ttggcaggtt caggttttta cttgtcattt
     1861 ttagtgtttt agataggaga taaattatgc taaaaacaat cataaaacgc gtattgcaaa
     1921 ttattccgat gctatttatt atctcgatta tttcgtttgc acttataaaa ttagcgcccg
     1981 gggatcccgt gaattctttt gttacgcctg atatgaatcc tgacgatgtg gaacgaatta
     2041 gacaaagttt aggacttgat caaccaattt atgtgcagta ctttatttgg cttggaaact
     2101 tgttgcaagg aaatcttggt tattcgattg tgaatagcca gccagttttg caacaaattt
     2161 tagagagaat tccggcgaca cttggtttgg tgggaacttc gcttgttctg acgctattat
     2221 tatcgattcc acttggttta gttgcggcga attacgaaaa tacgtggatt gataaagtat
     2281 taaacgggat ttcatatatt gggatttcga ttccgatttt ttggtttggg atgattttaa
     2341 tagatgtatt ttcgattcag ctaggttggc ttccaagtct agggatgcga acgattgggg
     2401 tcgactcttt ttgggatatg gcggagcatg cgattttacc agttataacg ctgactttcc
     2461 aagggtgtgc ggcatattat cgttacgtac gctcgaatac catcaaccaa ttaaaagaag
     2521 aatatgtttt gtttggttat gcgaaaggtc tatccaaagt gcaaattatg gggcatcatg
     2581 tcttgaaaaa ttccttgcta ccagttataa cactacttgg gatgtcactt ccgcaagtca
     2641 ttacaggcgc ttttattacc gaaagtattt tttcatggcc gggcatgggc tcgcttggaa
     2701 ttaacgcgat tttccaatta gattatccag ttattatggc gattacgcta ttttcagcgc
     2761 tgttattaat tatcggaaac ttgctggccg atttagctta tatgattgtc gatccgcgga
     2821 ttagggaaat ggggtgagga gttcatgatg cgattagatt tttcgaaaaa aacaatgcaa
     2881 gatttcgagc gggatgcaga agttgttcac gcaacacgag agcgtagttt ttggcgtttt
     2941 atgcttgctg accgccgagc tgtttttgcg acgagtgtgc taatacttat tacggtggct
     3001 tgtattttcg cgttcctttc gccttatgac cctaatgctc tttccgttca ggacaaactg
     3061 atgccgccaa attcgtcgca ctggtttggg acggatgacc atggtcggga ttacttgacg
     3121 cgtgtcttgt acggtggccg ggtttcacta cttgtcggtg tatttgcgat gatgattgcc
     3181 gttgtcgttg gaacgcttgc tgggacagtt agtggctact ttggtggatt cattgacaat
     3241 atggtgatgc gttttcttga tattttcatg tcgattccgt catttttcct actaatgatt
     3301 ttaaatgcat acttaaaacc gggaatttcg aacattatta tcattatcgg attgctttct
     3361 tggatggaag tggcgcggat agttcgagcg gagacgttaa cattaaaaga acgtgaattc
     3421 attttatact ccaagtcatc aggtggcgga tttttccaca tcatgttcaa gcacattatt
     3481 ccaaatgcga tgccatccat cgtcgttgca gcttcattaa acgtcgctac agccatttta
     3541 accgagtcag cactaagttt ccttggctta ggcgttcaac agcctaacgc ttcgtggggc
     3601 agcatgctga acaatgcgca aggttacgtc ggcgaagcaa catacttggc gcttttccct
     3661 ggattactaa ttttaatgac catcctttca ttcaacgtcc ttggcgatgt actgagaaaa
     3721 gggttatcac gtagatatta aatgtaaaaa cactttgatt ttttcagtca aagtgttttt
     3781 ttgtttttta aagaaaaggt acttaaaata gaaacgtaaa aaacgtgttt tagccaattt
     3841 ccaaggcata aattcacaaa acgctcacaa aacgagaatg cgtgcggtgc tataattaag
     3901 gataaggttt cattattata gacagagatg aggcgcagaa atgagtgaaa taaaagttaa
     3961 agaagcaaca ttaaaaaaac acgcgacaaa gttagaatca aaaggtaaat caaccgaata
     4021 tttaccaatg aaaggtggca atatggctta cagtcaagcc aattccatca accattttcg
     4081 aacagcattg tttgacttgg tagacgcggt ggacaatttt caaggtgtgg taggaacgga
     4141 tgccaaaaga ttgaaagaat taggcgtatc atttactcgc aaagaccaag agcttgaacg
     4201 aggcatggga ttgggaggta aataaatgga tgcaaagagc cagcaaatgg agacacaact
     4261 gcaactgctg aaaaaagaac aatccgcggc cgaagatttt ttgcaagatt tacaacgaca
     4321 acaaaatgaa caagagtggt tagcagaaga ttttgcacgt gtccatcaag aagaacggga
     4381 gtcgctggag cttctacgcg aagtttggca aggcgcagaa tcaagaagtt tcggctacta
     4441 tttggcagat ctacaggaag aagaaaaaca gaagtggcat aaaaaaatcc aagcaaacca
     4501 agaagaacac caacaaaaaa tcaccgcttg ccaaaataac atctaccaat tagaaaatca
     4561 acaacaagat ttacaaaagg agttgttaca gtgagccgaa ttgacatcgg agaaatacaa
     4621 acctttgcgc accaactaca tacagctaat gaagccggaa gaaaaagcat taaagacatc
     4681 aaaaaagccg tgaaaaacta taccgaagac ggcagtttaa aaggaaaagc gattgatgca
     4741 tcgaaaatta ctatcaaatg acctattttc cattatgtga tgcgataatc gaagcaatga
     4801 acgaaagcga agaacgatta gcgcaatata tagctgattt ccacgcccaa gtaagtggac
     4861 ggttctgctg atgcgagaat tgatgcggac ggcttatacg aactcgggaa aatgattgat
     4921 cgcatcgaag cgaaaaaaga agcactagcc cagcgaatga atactggaac agaagggcaa
     4981 atgcaaagtt accgttccca gctgagtatc gcctacaaac aagaaaatat cttagaaaaa
     5041 tacttggctt ttgaacaaag tcatggcggt ttttttgata atttaaccga tttagtccaa
     5101 ggaattcagc aaaccattcg cgaactccag tcgaatattc agtttaacag taaaacgggc
     5161 acctatgata tgagcaaatt gaatttcacc accgtaaccc ggatgcaaaa tgccttagga
     5221 aaagcgctaa aaaataacga aacaacattc aattttgacg aatatcaaaa aacgtaccgt
     5281 ggtcaaatgt gggtgttaat gaaaaatggt atagtagacg tagaagcaac gaacgcgtac
     5341 aatgccgccg tgcttaacgg ggaattagca cataaaagca atgaagcaca ggaagaagcc
     5401 gagttgttgc aggcagttat tcaatcggtg aaagaaggaa tagacccggt tactgggcaa
     5461 gagataagta aagcgcaagg gtttggtatt ataagtggtc ttgttttccg ctatactgct
     5521 ggaggttata aagggaagaa gttcaaggtt tctaaagatt ggttacacag aagaaagaaa
     5581 aataatggcg ttgaagttgg aacggacttt gggaaaatag gtaaattagt taatcatcct
     5641 aatattaaaa taaattggtc tgaacactcc gaacatggaa tgtctagatt gaaacaacgt
     5701 ggtctttcta agagtcaagt tgacgatttt gtggagcgtg gaaaagcttt atcccagaat
     5761 gggggagaaa aatttgcttt tataactgaa aatggtgttg caattgtcag caaagatggc
     5821 aaattagtta ctgcttgggg taaaaaagat tttgatgaag gaatggaaaa aataatagaa
     5881 aaattgtatg gaaagtaggg tgtcattatg tatgaaaaag tagaaaaaat aataaatgat
     5941 tgggatccaa tagagctgtt tcccttagct ccaaaagatg aatatagtca agaaatcaac
     6001 aaaataatta gtattgttca agaaaatcat aacattgata tgaatgtatt agctaaaggt
     6061 ataagaaaaa ttttcataga ttcgtttgga gaaaatttaa tatttaaaaa taacgaagat
     6121 gaaatagctg aaaaaatttt agcgctataa ttaatgaggg aaataataag atggaagaac
     6181 aagagataat tggaaaaata gaaagcttac caaataattt tagtgaaaat gacagtattt
     6241 atatatcaca agaaaacatt aaaaatttgg tttt
//
LOCUS       DASDYO010000145         6253 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.145, whole genome shotgun sequence.
ACCESSION   DASDYO010000145 DASDYO010000000
VERSION     DASDYO010000145.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6253)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6253)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6253
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.145"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            98..1729
                     /locus_tag="U0290_002641"
     CDS             98..1729
                     /locus_tag="U0290_002641"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738510.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SulP family inorganic anion transporter"
                     /protein_id="HEM2302672.1"
                     /translation="MKKVWLNSVKDYTWARFRKDLLAGIIVGIIALPLAMSFAIASGV
                     SPEYGIYSSFVAGIIVSIFGGSKFQIAGPTGAFIPVLLGIVLTYGYQDLLVAGMMAGV
                     LLCLMGIFKIGTLIKFIPRPVTIGFTAGIAVTIFMGQVGNFLGLTGMEKHESFVANMN
                     EIWLHLDSWNFYSVFISCICMLVLFIFPKILPRIPAPLIGLVITTAIAMLFFPDALPT
                     IGSAYGDIPSTFPPFEFPDMTFANMSKLIGPAFVIAMLGGIESLLSAVVADGMTNTKH
                     NSNRELIGQGIANIVTPMFGGIPATGAIARTATNINNGATSRVSGVIHGIFVLLTLLV
                     LAPVAVNIPIAAMAPILMLVAWNMSERKTFQHIIKLKSGDTLVLIITFLLTVFASLTV
                     AVEVGLLLAVVLFAKQMGSSMQIEEIEPEGAEIAPHLHEKISIFTIRGPLFFGAAQIF
                     QQNIIKAIHVKPKYLILRMGKVPIIDATAEGYFHQIEKEFSKQGGQILITGLTDKAKE
                     SLKGSGLYDRIGEEHFFSHTEDAIHYAENALNKGD"
     gene            1800..3977
                     /locus_tag="U0290_002642"
     CDS             1800..3977
                     /locus_tag="U0290_002642"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464424.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA-binding transcriptional accessory protein"
                     /protein_id="HEM2302673.1"
                     /translation="MEQMQDKIIKLVQKSLTYKPAQINAVIKLMEEGNTVPFIARYRK
                     EMTGSLDEVEIRDIEETFEYVTKLENRKEEIIRLIDEQGKLTDELRAAITKAEKHQAL
                     EDLYRPYKQKKRTKATIAKEKGLEPLADWLMSFPSNADPLKEAANYISEEKEVESAEA
                     ALLGAHEIIAEQISDEPSFREWIRNFTRKFGMIESRAKNAEVDEKGVYEMYYEFNEMI
                     GKVASHRILAFNRGEKEDILRVQVQVDTTKIFQYLFEKVIQNRNSATRPYVEEAIMDA
                     YKRFIGPAIEREIRGELTEKGEEQAIHIFSENLRKLLLQPPLKGKIILGVDPAFRTGC
                     KFSVLDQTGKVLEIGVVYPHTAKARRPEAKQKIAEILSTYKVEVIAIGNGTASRETEQ
                     FIVEVIRESKSNAYYCIVNEAGASVYSASETAREEFPDYQVEERSAVSIGRRLQDPLA
                     ELVKIDPKSVGVGQYQHDVAQKRLNETLTFVVETAVNQVGVNVNTASASLLQYVAGLN
                     KTVANNIRKYREENGSFASRKELKKVPRLGAKSYEQSIGFLRILEGENPLDKTAIHPE
                     SYKAAEQIVKAAGFGLKDIGSEDLKAALQALSIPEEAEKLSIGKETMRDIIDNLIAPG
                     RDLRDELPAPLLKQDVISMEDLKQGMELQGTVRNVVDFGAFVDIGVKQDGLVHISKLS
                     NSFVKNPMDVVSVGDVVTVWVDEVDTKKNRIALTMLNPNGSVK"
     gene            3977..4444
                     /locus_tag="U0290_002643"
     CDS             3977..4444
                     /locus_tag="U0290_002643"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003746483.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SprT family protein"
                     /protein_id="HEM2302674.1"
                     /translation="MNQAELQRHMEEVSLQFFQKEFRHQAVFNARLRTTGGRYLLKSH
                     HIEMNPKYLENFGLAYFIGIMKHELCHYHLHLEKKGYQHRDQDFRELLKKVDAPRFCA
                     TIPREITMHEYTCKSCGKSFLRQRRFNVNRYRCGSCGGKLIQTGSKKIYTENA"
     gene            4497..4569
                     /locus_tag="U0290_002644"
     tRNA            4497..4569
                     /locus_tag="U0290_002644"
                     /product="tRNA-Asn"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4530..4532,aa:Asn,seq:gtt)
     gene            4573..4660
                     /locus_tag="U0290_002645"
     tRNA            4573..4660
                     /locus_tag="U0290_002645"
                     /product="tRNA-Ser"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:4607..4609,aa:Ser,seq:gct)
     gene            4813..5253
                     /locus_tag="U0290_002646"
     CDS             4813..5253
                     /locus_tag="U0290_002646"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601853.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NADAR family protein"
                     /protein_id="HEM2302675.1"
                     /translation="MKVIHFYSENADYGCFSNFSLHPIVIDGVTYPTTEHYFQAQKFI
                     DKKIIKKVINTKKPIDAAKLGRNRDFPLRKGWESMKDEVMLKAIRAKVAQHSEVKEML
                     LTTENAILVEHTENDHYWGDGGDGSGKNRLGKILMKVRDEWNSK"
     gene            5269..5754
                     /locus_tag="U0290_002647"
     CDS             5269..5754
                     /locus_tag="U0290_002647"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SMI1/KNR4 family protein"
                     /protein_id="HEM2302676.1"
                     /translation="MEPINHFFEWAKNNNWQVDLSAVEKNLPEQILKRYGKLPDAYKA
                     FYRQLNLCSNVGDTCWFLLEEDFLENEDDAFSWNSFEQMSLEAAEGDTNLENEVKLFW
                     NAHLPIMMSVGGCYEYYAITLNDGNIVHGSEPEFEESSIVADSFADFLLKIVAGEIVI
                     S"
     gene            5809..6201
                     /locus_tag="U0290_002648"
     CDS             5809..6201
                     /locus_tag="U0290_002648"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464426.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron chaperone"
                     /protein_id="HEM2302677.1"
                     /translation="MDNKLEFTTIDEYITQAPPETKEVLQKIRETIKAAAPEATEKIS
                     YQMPTFYLEGNLVHFAVAKNHYGFYPASSGIAAFESKLGNYKHSKGAVQFPIKEEVPY
                     ELIKEMTLFRLAENKQKAAEKLAKKKKK"
BASE COUNT         2074 a         1073 c         1379 g         1727 t
ORIGIN      
        1 cttcatcatg tgataaatat cacttaataa gcgtgaagca atcttgcttt gcgttttttc
       61 gcgcggatta aaatataaat aagagagaag gagcaaattg aagaaagttt ggttgaatag
      121 tgtaaaagat tatacgtggg cgagatttag gaaagacttg cttgcgggaa ttatcgtggg
      181 cattatagct ttaccactag cgatgtcctt cgcgattgca tcaggtgtaa gtccagaata
      241 tgggatttat tcgagttttg tagcgggaat aatcgtttct attttcgggg gctcgaagtt
      301 tcaaattgct ggtccaactg gtgcttttat tccagtttta ctaggaatcg tattaactta
      361 tgggtaccaa gatttactcg ttgctggaat gatggcaggg gtcttacttt gcttaatggg
      421 gatttttaaa attgggactt taattaaatt tatcccgcgt cctgtaacta tcggatttac
      481 agccgggatt gctgtcacga tttttatggg gcaagtgggg aacttcctcg gtttaacagg
      541 tatggaaaaa catgaatcat ttgtcgcgaa tatgaatgag atctggttac atttagattc
      601 atggaatttc tatagtgtgt tcatttcctg tatttgtatg cttgtcttat ttatttttcc
      661 taaaatttta ccgagaattc cagcaccact tattggactt gtgattacga cggcgattgc
      721 gatgctattt ttcccggatg cgcttccgac gattgggtca gcgtatggag atattccgag
      781 tacttttcct ccttttgaat ttcccgatat gacttttgcg aatatgagta aattgattgg
      841 gccagctttt gttattgcga tgctcggcgg gattgaatca cttctttcag cggttgtggc
      901 agatggaatg acgaatacaa aacacaatag taatcgcgag ctcattgggc aaggtatcgc
      961 aaatattgta acgccaatgt tcggcggaat tcccgcaacg ggagctatcg caagaacggc
     1021 aaccaacatt aataatggcg caactagccg tgtctctggc gttatccacg ggattttcgt
     1081 tttactcact ttacttgtac ttgcaccagt agctgtcaat attccaattg ctgcaatggc
     1141 accgatttta atgctagttg cttggaatat gagtgaacga aaaaccttcc agcacattat
     1201 taagttgaaa tcgggcgata ctttagtgct aattattacc tttttattaa cagtatttgc
     1261 aagcttaact gtggccgtcg aagttggttt gctgctggca gtggtgcttt tcgctaaaca
     1321 aatgggaagt tcgatgcaaa ttgaagaaat cgaaccagaa ggcgccgaaa ttgctcctca
     1381 tttacacgag aaaattagta tttttactat tcgtgggccg cttttctttg gtgcagcaca
     1441 gattttccaa caaaatatta tcaaagcaat ccatgttaaa ccaaaatatc ttatcttgcg
     1501 aatggggaaa gtgccgatta ttgatgctac ggcagaaggc tatttccacc aaattgaaaa
     1561 agaattttcg aagcaaggcg ggcaaatttt gattactgga ctaacagata aagcgaaaga
     1621 aagtttgaag ggtagcgggc tttacgaccg aatcggcgaa gaacacttct tttcccatac
     1681 cgaagatgcg attcattatg cggaaaatgc tttaaataag ggagactgat agcttttgtc
     1741 agttgaaacg taattatgtt acacttagta gataatgaaa taattggagg ctatcaagta
     1801 tggaacaaat gcaagataaa ataataaaac tagtccaaaa atcgctaacg tataaaccag
     1861 cgcaaatcaa tgccgttatc aaattaatgg aagaaggcaa cacagttcca tttatcgcgc
     1921 ggtaccgtaa agaaatgact ggtagcttag atgaagtaga aatccgtgat atcgaagaaa
     1981 cctttgaata tgtaacaaaa ttagaaaatc gtaaagaaga aattattcgc ctaatagatg
     2041 aacaaggaaa attaacagac gaactgagag cggcaattac caaagcggaa aaacatcaag
     2101 cgctcgaaga tttataccgt ccttacaaac aaaagaaacg cacaaaagca acgattgcga
     2161 aagaaaaagg attagagccg cttgctgatt ggctaatgag cttcccaagt aacgcggacc
     2221 cactgaaaga agctgcaaac tatatttcag aagaaaaaga agtggagtca gcagaagctg
     2281 ctttactcgg cgcacatgaa atcatcgcgg aacaaatcag tgatgagcct agtttccgtg
     2341 agtggattcg taactttacg cgcaaatttg ggatgattga atccagagcg aaaaacgccg
     2401 aagtagacga aaaaggcgtt tacgaaatgt attatgaatt taacgaaatg attggcaaag
     2461 tagcaagtca ccgcatcctt gcatttaacc gcggagagaa agaagacatt ttacgtgtac
     2521 aagtccaagt agatacgaca aaaattttcc aatatttatt tgaaaaagtt atccaaaacc
     2581 gtaattctgc aacacgacca tacgtagaag aagctataat ggatgcttat aaacgcttta
     2641 tcggaccggc aattgaacgt gaaattcgcg gtgaactaac agaaaaaggc gaagaacaag
     2701 ccatccatat tttctccgag aacttgcgca aactactttt acaaccacct ttaaaaggaa
     2761 aaatcattct tggggtcgat ccggctttta gaacaggttg taaattctct gtattagatc
     2821 aaacggggaa agtactagaa attggcgttg tttatccaca tacagcaaaa gcacgccgtc
     2881 cggaagccaa acaaaaaatt gcggagattt tatccacata caaagtggaa gttatcgcaa
     2941 ttggtaacgg aacagcctca cgtgaaacag agcaatttat tgtggaagtg attcgtgaat
     3001 cgaaatcgaa tgcttattat tgtatcgtca atgaagctgg tgcgagtgtt tattcagcga
     3061 gtgaaacggc ccgcgaagaa ttcccagact atcaagtaga agagcgtagc gctgtttcga
     3121 ttggtcgtcg tttgcaagat ccgctagctg aacttgtgaa aatcgatcca aaatctgtag
     3181 gcgtagggca atatcaacat gacgtagcgc aaaaacgttt aaatgaaaca ctaactttcg
     3241 tcgttgaaac ggccgttaac caagtgggcg taaacgttaa tacggcctcg gcttctttgt
     3301 tacaatatgt tgctggctta aacaagacag tcgcaaataa tatccgtaaa tatcgcgaag
     3361 aaaacggctc gttcgcttct cgtaaagagt tgaaaaaagt acctcgtctt ggggcaaaat
     3421 cgtatgaaca aagtatcggt ttcttacgta ttttggaagg tgaaaatccg cttgataaaa
     3481 ccgccattca cccggaaagt tataaggcag ctgaacaaat tgtaaaagca gctggtttcg
     3541 gattgaaaga tattggtagc gaggatttaa aagccgcact tcaagcgctt agtatcccag
     3601 aagaagcaga gaaattaagc atcggtaaag aaaccatgcg cgatatcatt gataatttaa
     3661 ttgctcctgg tcgcgacctt cgtgacgaac ttccagcacc acttttaaaa caagatgtta
     3721 tttcgatgga agatttaaaa caaggcatgg aattacaagg aaccgttcgg aacgtagttg
     3781 actttggcgc atttgttgat attggcgtga aacaagacgg ccttgtgcat atttcgaaac
     3841 taagcaattc ttttgttaaa aacccgatgg atgtcgtttc agtaggagac gttgtaactg
     3901 tttgggtaga tgaagtagat acaaagaaaa accgtattgc tttaactatg cttaatccta
     3961 atggaagtgt taaataatga atcaagcaga attgcagcga cacatggaag aagtgtcgct
     4021 gcaatttttc caaaaagaat ttcgtcacca agccgtgttt aatgcgcgct tacgaaccac
     4081 tgggggacgt tatttgctaa aaagtcatca tatcgaaatg aaccccaagt acctagaaaa
     4141 ctttggatta gcgtacttta tcgggattat gaagcacgaa ctatgtcatt atcaccttca
     4201 tttagagaaa aaaggctatc agcatcgcga tcaagatttc cgtgagttat taaaaaaagt
     4261 agacgcaccg agattttgtg caacgatacc acgtgaaatt accatgcatg aatatacatg
     4321 caaaagttgc gggaagtcct ttttaagaca acgcagattc aatgtgaacc gttatcgctg
     4381 tggcagttgt ggtggaaaat taatacaaac aggttccaag aaaatttata cagaaaacgc
     4441 atgaaaagtc ttgcaatttt actaagttct gcgtatacta gtggaagtca gataattcca
     4501 cagtagctca gttggtagag caatcggctg ttaaccgatc ggtcgcaggt tcgagtcctg
     4561 cctgtggagt ttggggaagt actcaagtgg ctgaagaggt gcccctgcta agggtatagg
     4621 tcgctcgcgc ggcgcgaggg ttcaaatccc tccttctccg taataactta taaagacatt
     4681 gtttaggaaa ctaagcagtg tctttttttg cggaaaaata gcgatagatt tgcgtctata
     4741 tgtatgctaa agttattttg aaagataagc tcaagttgca aataacataa cgtaaatact
     4801 cggaggtgca aaatgaaggt tatccatttt tatagtgaaa atgcggacta tggctgtttc
     4861 tctaatttct ctttacatcc aattgtcata gacggcgtga cttacccaac cacagaacac
     4921 tatttccaag cacaaaaatt tatagataaa aaaattatta aaaaagtaat taatacgaaa
     4981 aaaccaatag atgcagcaaa attgggtaga aatagagact tcccactgcg aaaaggctgg
     5041 gaaagtatga aagacgaagt gatgttaaaa gcaatcagag caaaagtagc gcaacattcg
     5101 gaagtgaaag aaatgctttt aaccacagag aatgctattt tagtggaaca tacggaaaat
     5161 gatcattatt ggggcgacgg cggagatggc tctggaaaaa atcgtctagg caagattttg
     5221 atgaaagtca gagacgaatg gaactctaaa tagtgggagg tagcttaaat ggaaccaata
     5281 aatcattttt ttgaatgggc taaaaataat aattggcaag tagatttgtc tgctgtagag
     5341 aaaaacttgc cagagcagat tttaaagaga tatggaaagt tgccagatgc atataaggcc
     5401 ttttatagac aacttaacct ctgtagcaat gtgggtgaca cttgttggtt tttgttggaa
     5461 gaagattttt tagagaatga ggatgacgcc ttttcgtgga attcttttga acaaatgagt
     5521 ttagaagcag cagaaggcga tacaaactta gaaaatgaag taaaactatt ttggaatgca
     5581 catttaccaa ttatgatgag tgttggcggt tgttatgaat attatgctat cactttaaat
     5641 gacggaaata ttgttcatgg ttcggaacca gagtttgaag aaagttcgat tgtagcagac
     5701 tcgttcgcgg attttttact gaaaatcgtg gctggagaaa tagtgataag ttaaaattaa
     5761 ttaggaaatt tgctataata agaaaaacgt ttcagaaagg aatcgactat ggataataaa
     5821 ctagaattta caacgattga tgaatatatt acccaagcgc caccggaaac aaaagaagtg
     5881 ttgcaaaaaa tcagagaaac gattaaagca gctgcaccgg aagcaacaga aaaaatcagt
     5941 tatcaaatgc cgacttttta tttggaagga aacttggtgc actttgctgt tgcgaaaaat
     6001 cactacgggt tttatccagc ctctagtggt attgcggcat tcgaatctaa actcggaaat
     6061 tacaagcatt caaaaggtgc tgtacagttt ccaatcaaag aagaagttcc ttatgaatta
     6121 attaaagaaa tgacactttt ccgactagca gaaaataaac aaaaagcagc agaaaagcta
     6181 gcaaagaaga agaaaaaata agaaggagac tttcattgtg atgatgaaag tcttttttgt
     6241 tcggtctttt att
//
LOCUS       DASDYO010000146         6241 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.146, whole genome shotgun sequence.
ACCESSION   DASDYO010000146 DASDYO010000000
VERSION     DASDYO010000146.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6241)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6241)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6241
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.146"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..567
                     /gene="era"
                     /locus_tag="U0290_002649"
     CDS             <1..567
                     /gene="era"
                     /locus_tag="U0290_002649"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GTPase Era"
                     /protein_id="HEM2302678.1"
                     /translation="VQTPVFLLINKIDLIAPEDLFKLIEQYRDLMDFDEIIPISALQG
                     NNVPNLLEQTNANLEIGPMYYPKDQITDHPERFIISELIREQVLQLTREEVPHSVAVV
                     IEGIEKNPKTEKLTINATIIVERSTQKGIIIGKQGQMLKQIGMRARKEIERLLGSKVF
                     LEIWVKVQKNWRDKEHYLQDYGFDREEY"
     gene            complement(614..1243)
                     /locus_tag="U0290_002650"
     CDS             complement(614..1243)
                     /locus_tag="U0290_002650"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464986.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4352 domain-containing protein"
                     /protein_id="HEM2302679.1"
                     /translation="MGMLLILLVSLFILTFIGVVVGIILLIVRKEKWAGIIVAGLSVG
                     IGFLVLAAGLNITTIKLFEGFNNPLSIHNYNSSNEPFTNDYAEDYDEDYYDDYIDVSY
                     GESVEIENNSTVTIYKPELTQMKEGYDIYKVKVKYANTSSDPISFYSEDIALYDNADD
                     DYGQQITEEGFAGEIQPGETKELTLYYEVYNLGPYDVEYDNYSWTTNKE"
     gene            1380..2147
                     /gene="recO"
                     /locus_tag="U0290_002651"
     CDS             1380..2147
                     /gene="recO"
                     /locus_tag="U0290_002651"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464985.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RecO"
                     /protein_id="HEM2302680.1"
                     /translation="MEKCEGIVIRQTSYRESDKIVRMYTREFGKIGVVARGAKKTKSR
                     LAAVTQLFTNGYFTFFGSNGLGTLQQGEVIENFSSIQQDIFMTAYATYVCELLDKATE
                     ERQPNPYLYELTFQILRDINEGYDPQILTQIFEMKMLPVLGLYPTMDKCAICGETTGH
                     FDFSTSSNGIICHRCFEKDRYRMHLPENVVKLLRLFFIFQLDRLGNIDVKPETKEWLQ
                     KAIDTYYDEYSGLYLKSRKFLREMDKWENMLKKDSDD"
     misc_binding    2188..2361
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00230"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="T-box leader; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="tRNA"
                     /db_xref="RFAM:RF00230"
     gene            2429..3319
                     /gene="glyQ"
                     /locus_tag="U0290_002652"
     CDS             2429..3319
                     /gene="glyQ"
                     /locus_tag="U0290_002652"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464984.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit alpha"
                     /protein_id="HEM2302681.1"
                     /translation="MNLQTMIRTLQDYWSEQGCIMLQSYDVEKGAGTMSPYTFLKAIG
                     PEPWKAGYVEPSRRPADGRYGENPNRLFQHHQFQVVMKPSPDNIQELYLGSLEKLGIN
                     PLEHDIRFVEDNWENPSLGCAGLGWEVWLDGMEITQFTYFQQVGGLECFPVTSEITYG
                     VERLASYIQDKENVFDLEWTEGISYRDIFFQAEFENSTYAFETSNTDMLLTLFDTYER
                     EATRQMQDGLVFPAYDYVLKCSHTFNLLDARGVVSVTERAQYIGRIRNLARRIAKTFY
                     ESREKLGFPLVKEEGGKRHE"
     gene            3312..5378
                     /locus_tag="U0290_002653"
     CDS             3312..5378
                     /locus_tag="U0290_002653"
                     /EC_number="6.1.1.14"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464983.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycine--tRNA ligase subunit beta"
                     /protein_id="HEM2302682.1"
                     /translation="MSKDFLLEIGLEEMPAKYVTSSVLQLEKRVTDWLKDNQIEFKEI
                     KTYSTPRRLTVLVEEMAEEQANRVEEAKGPAKKIALDDEGNWSKAALGFAKSQKVAPE
                     DLTFREIKGVEYIYIKKEVIGEKTTALLPSLEKVVTSMTFPVSMHWGSNDLRYIRPIK
                     WLIAMFGEEIIPFEITGVSTSNTSRGHRFLGKTATINQPSDYPNALLEQFVVVNASER
                     KQAIVEQLRELETMENWQIREDDDLLEEVTNLVEYPTVLAGNFEKEYLELPEEVLITT
                     MKEHQRYFPVFSQEGELLPHFVTVRNGNHENLDTVARGNEKVLRARLSDADFFYQEDL
                     KITIDEAVAKLQNIVFHEKLGTLTEKMKRVQKVALMLADYLNWQEEDKQDIIRLTNIY
                     KFDLVTNIVGEFPELQGLMGEKYALLQGEKPAIATAIREHYLPSSAEGDLPQTDLGSL
                     IAIADKLETLIGFFCVNIAPTGSADPFGLRRSAFGAVRIIQANGWDIPMLEVVSRIVD
                     MERAEGATELPSSDVIKEVQTFLKNRLRVILQGHHIRHDIIDAVIGGDPNMIPQLIDR
                     AQILNKHADAEWFRPTIEALTRVVNISKKYEDGVEVDPSLFENEYEQALFDKLEKLKF
                     DFAGLKIVDRLKAFADLRTTIDAYFDNTLVMTDNDELKNNRLALLFELASFIKEFAQM
                     DEINVK"
     gene            5413..6237
                     /locus_tag="U0290_002654"
     CDS             5413..6237
                     /locus_tag="U0290_002654"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464982.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="kinase/pyrophosphorylase"
                     /protein_id="HEM2302683.1"
                     /translation="MTQPAVYVVSDSTGETAELVTRAALSQFGQTPKFIHRFHHVDSS
                     HMIEEIVDLVAVNNGIIVHTIVLESVREELNKTAQAFGVPIIDLFGPLLNQLEETYKI
                     KPLSEPGRVRSMDEAYFNKVAAIEFAVENDDGRNPRGILQADYVLIGISRTSKTPLSQ
                     YLALKGLKIVNIPIVPEAQIPDELFEIDPKKIIGLKISKQKLTKIRQERLISIGLPGA
                     GTYASNQRIDEELAIFNKLASKLNCFVLDVTNKAIEETANEILIHIGEIVDENLEL"
BASE COUNT         2133 a         1056 c         1219 g         1833 t
ORIGIN      
        1 gtacaaacac ctgtttttct tttgattaat aagattgatt taattgctcc agaagattta
       61 ttcaagttaa ttgaacagta ccgcgatttg atggactttg atgagattat tcctatttca
      121 gcacttcaag gaaataacgt gcctaactta ctagaacaaa cgaatgctaa cttagaaatc
      181 ggaccaatgt attatccaaa agatcaaatc acggaccatc ctgagcgttt catcatctcg
      241 gagttaattc gtgaacaggt tttacaatta acacgagaag aagttccaca ttctgtagca
      301 gtggttattg aaggaattga aaaaaaccct aaaacagaaa aacttacaat caatgctaca
      361 attattgtag aaagaagcac gcaaaaagga attattattg gtaaacaagg tcaaatgcta
      421 aaacaaattg gtatgcgtgc tagaaaagaa attgaacgct tactcggctc caaagtcttc
      481 ttagaaattt gggtaaaagt tcaaaaaaac tggcgcgata aagagcatta tttgcaagat
      541 tacggtttcg accgcgaaga gtattaaaaa agcatctggc gcacaattgg gtttgtgcgc
      601 cagatgcttt taattattct ttatttgtag tccagctata gttatcatat tctacatcat
      661 atggtccaag gttatacact tcatagtaaa gcgttaattc ttttgtctcc cctggttgaa
      721 tttctccagc aaaaccttct tccgtaattt gttggccata atcatcgtct gcattatcat
      781 aaagcgcaat gtcttcggaa tagaagctta ttggatcaga acttgtattt gcgtatttca
      841 cttttacttt ataaatatca tagccttcct tcatttgggt cagctcaggt ttataaatgg
      901 taactgtgct attgttttct atctcaacag attctccgta acttacgtct atgtagtcgt
      961 catagtaatc ttcatcatag tcttctgcat aatcatttgt aaatggttca ttgctcgaat
     1021 tgtaattatg aatagaaagt ggattattaa atccttcaaa taatttaatc gttgttatat
     1081 taagtccagc tgctaatact aaaaagccga ttcccacgga taatcccgca acaataatgc
     1141 ccgcccattt ctcttttctt acaataagca aaataattcc cacaacaact cctatgaatg
     1201 tgagtataaa taagctgact aataatataa gtaacatacc caaagtaaaa aatcctctct
     1261 gacttaccgt tttctctatt ttacaatagg catccgtgga aagatagcaa aaaatataaa
     1321 aagacataat cattaagaaa atgttataat aagacgtgta aaaaagggag gcttaccaca
     1381 tggagaaatg cgaaggaatc gtgatacggc aaacgagtta ccgtgaatca gataaaattg
     1441 tccgaatgta tacacgtgaa tttgggaaga ttggtgtggt ggctcgtggg gcaaaaaaaa
     1501 cgaaaagcag attagctgca gtaactcaat tatttacgaa tggttatttt actttctttg
     1561 gtagcaatgg ccttggtacg cttcagcaag gggaagtcat agaaaatttt tcttctattc
     1621 agcaagatat ttttatgact gcttatgcga cttatgtttg cgaattgctt gataaagcca
     1681 ctgaagaacg ccaaccgaat ccatatctat atgaattaac ttttcaaatt ttgcgagata
     1741 taaatgaagg atatgatccg caaattctca ctcaaatttt tgaaatgaaa atgttaccgg
     1801 tgcttggtct ttacccaaca atggataagt gcgccatttg tggtgaaaca acaggtcatt
     1861 ttgatttttc aacaagtagt aatggcatta tctgtcatcg ttgctttgag aaagaccgtt
     1921 acagaatgca tttgccagaa aatgtcgtaa aattgctgcg tttgtttttc atcttccaat
     1981 tagatagact aggaaacatc gatgtgaagc cagaaacgaa agaatggctt caaaaagcaa
     2041 ttgatacata ctacgatgaa tactctggtt tgtatttaaa aagcaggaaa tttttgcgcg
     2101 aaatggacaa atgggaaaat atgttaaaaa aagatagcga tgattgactt tttagcaaaa
     2161 atacagtatc ttttaatata tcaactaata ggtacgttga aggaaaatag taacaaaaag
     2221 ctctattttt agcgagtccg ggtttggtgt gagccggata tttaactttt tgtgaaggcg
     2281 ttctggagta cagcgaaatc aaggtgggaa ttgttttaat tccaaatagg gtggaaccgc
     2341 gagctaactc tcgtccctat atgctttaaa tcagcatata gggacgagag tttttatatt
     2401 ggctgaatta tttttggagg tggaagcaat gaatttacaa acaatgatta gaacattaca
     2461 agattattgg tccgaacaag gttgtattat gttgcaatcg tatgatgtgg aaaaaggtgc
     2521 tggcacaatg agtccgtata ctttcttaaa agcaattggt ccagagccgt ggaaagcggg
     2581 ttacgtagag ccgtcgcgtc gtcctgctga tggtcgttac ggagaaaatc caaacagatt
     2641 attccaacat caccaatttc aagtagtgat gaagccttct cctgacaata ttcaagagct
     2701 ttacctaggt tctttagaaa aattaggtat caatccgtta gaacatgata tccgttttgt
     2761 agaggataac tgggagaatc catctcttgg ttgtgcgggc cttggttggg aagtatggtt
     2821 agatggaatg gaaatcacac aattcactta tttccaacaa gtaggtggct tagaatgttt
     2881 ccctgttact tccgaaatca cttacggtgt ggaacgttta gcaagctata ttcaagataa
     2941 agagaatgta tttgatttag aatggacaga aggtattagc taccgtgata ttttcttcca
     3001 agcagaattc gaaaactcga catatgcttt tgaaacttcg aatacagata tgctgttgac
     3061 actttttgac acatatgaaa gagaagccac tcgccaaatg caagacggcc ttgttttccc
     3121 agcatatgat tacgtattga aatgttcgca tacgtttaac ttactagatg ctcgcggcgt
     3181 tgtttcagta actgaacgcg cacagtatat cggtcgtatc agaaacttag caagacgtat
     3241 cgccaaaaca ttttatgaat cacgagaaaa acttggcttc ccattagtca aagaagaggg
     3301 aggaaaacgt catgagtaaa gactttttat tagaaattgg tttagaagaa atgccagcaa
     3361 aatatgtgac tagctctgta ctacaactgg aaaaacgagt aactgattgg ttaaaagaca
     3421 accaaatcga atttaaagaa attaaaactt attctacacc aagacgttta actgtcctag
     3481 tagaagaaat ggctgaagaa caagctaatc gtgtggaaga agcaaaaggc cctgcaaaaa
     3541 aaatcgctct agacgacgaa ggcaactggt caaaagcagc attagggttt gcaaaaagtc
     3601 aaaaagttgc gccagaagat ttaactttcc gcgaaattaa aggtgttgaa tatatttata
     3661 ttaaaaaaga agtaatcggc gaaaaaacaa cggcgttact tccaagctta gaaaaagtag
     3721 taacaagtat gactttccca gtaagtatgc actggggtag taatgattta cgttatattc
     3781 gtccaatcaa atggcttatc gcaatgtttg gcgaagaaat tattccattt gaaatcactg
     3841 gtgtctcaac tagtaataca tcccgtggac atcgtttctt aggaaaaaca gctacaatca
     3901 accaaccgag cgactatcca aatgcattat tagaacaatt tgtcgttgtt aatgctagtg
     3961 aacgcaaaca ggctattgta gaacaattac gtgaactaga aacgatggaa aattggcaaa
     4021 tcagagaaga tgacgactta ttagaagaag taactaatct tgtcgaatat ccaactgtac
     4081 tagcaggtaa ttttgaaaaa gaatatctgg aactacccga agaagtttta attacgacga
     4141 tgaaagaaca ccaacgttac ttcccagttt tcagccaaga aggagaattg ttgcctcatt
     4201 ttgtaaccgt tcgtaatggt aaccatgaaa atctagatac agtggcacga ggaaacgaaa
     4261 aagtactacg cgctcgtttg tcagatgctg atttcttcta tcaagaagat ttaaaaataa
     4321 ccattgatga agcagttgct aaattacaaa atatcgtttt ccatgaaaaa ttaggcactt
     4381 tgacagaaaa aatgaaacga gtgcaaaaag tggcattaat gcttgctgat tatttaaatt
     4441 ggcaagaaga agataaacaa gacattatcc gcttaacaaa tatttataaa tttgatttag
     4501 taaccaatat cgttggtgaa ttccctgaac tacaaggttt aatgggcgaa aaatatgcat
     4561 tgttgcaagg cgaaaaacca gcaatcgcaa cagctattcg tgaacattat ttaccaagct
     4621 cagcagaagg cgatttacca caaacagact taggttcact tatcgctatt gcagataaat
     4681 tagaaacatt aattggcttc ttctgtgtaa atattgcacc aacaggctct gctgatccat
     4741 ttggtttacg tcgtagtgct tttggagcgg tgcgtattat ccaagcaaat ggttgggaca
     4801 ttccaatgct tgaagtggtt tctcgtattg tggatatgga gcgtgcagaa ggggctacag
     4861 aactaccaag ttcagatgta ataaaagaag tgcagacttt cctaaaaaat cgtttgcgtg
     4921 ttattttaca aggccatcat attcgccatg atattattga cgctgttatc ggcggcgatc
     4981 ctaatatgat tcctcaattg attgatcgtg ctcaaatatt gaataagcat gcggacgcag
     5041 agtggttccg cccaactatc gaagccttaa cacgagtagt taatatttct aaaaaatacg
     5101 aagatggcgt agaagtggat ccgagcctat ttgaaaatga atacgagcaa gccctatttg
     5161 ataaattaga aaaactaaaa tttgattttg ctggtttaaa aattgttgac agactaaaag
     5221 catttgcaga tttacgtaca acaattgatg catatttcga taacacgcta gttatgactg
     5281 ataatgatga attgaaaaat aatcgtcttg cactattatt cgaacttgca agctttatta
     5341 aagagtttgc tcaaatggat gaaattaatg taaaataaaa ggaagatttt gagcaaagag
     5401 gaggaagtat gtatgactca accagccgta tacgtggttt ccgattcaac aggagaaacg
     5461 gccgaactag tgacaagagc agcactaagt caatttggtc aaacaccgaa atttatccat
     5521 cgttttcacc acgtcgattc ttctcatatg attgaagaaa ttgttgactt agtggcagtg
     5581 aacaatggca taatcgtgca caccattgta ctcgaaagcg tccgtgaaga gcttaataaa
     5641 actgctcaag ctttcggcgt accgataatt gacttatttg ggccgctttt aaatcagtta
     5701 gaagaaacct acaaaatcaa accactttct gaacctggcc gcgttcgttc tatggatgaa
     5761 gcttatttca ataaagtagc cgcaatcgaa tttgccgtag agaatgacga cggccgtaat
     5821 ccaagaggta ttttacaagc ggattatgtt ttaatcggta tttcaagaac ttcaaaaact
     5881 cctttatcgc aatatttggc gcttaaagga ttaaaaatcg tcaatattcc aatcgttcca
     5941 gaagcacaaa tcccagatga actttttgaa attgacccta aaaaaataat tggtctaaaa
     6001 attagtaaac aaaaattaac gaagattaga caagagcgtt taatatcgat tggtttacct
     6061 ggtgctggta cttatgcaag taatcaacga attgatgaag aattagcgat ttttaataaa
     6121 ctagccagta aattaaattg tttcgtgtta gacgtgacta ataaagccat tgaagagact
     6181 gcaaacgaga ttttaatcca tattggtgaa attgttgatg aaaatttaga attataagaa
     6241 g
//
LOCUS       DASDYO010000147         6179 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.147, whole genome shotgun sequence.
ACCESSION   DASDYO010000147 DASDYO010000000
VERSION     DASDYO010000147.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6179)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6179)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6179
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.147"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..1631)
                     /locus_tag="U0290_002655"
     CDS             complement(<1..1631)
                     /locus_tag="U0290_002655"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HEM2302684.1"
                     /translation="MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSL
                     DTSNIIAEEVAQEKPAEVEQLEEIPITDELMQNPDVLEQPVADSDDTDLTVVSSGDFW
                     TIYRNTVNNEYSLCMFGNVPSSRPTAWNSYLKSIKHIEIEEATLTGSFEAYFRGTVFT
                     VLESVRIEQCNLSGVTSFDMAFYNSGIEKVIIRDNDYPTAPSLLATTYMFSLCRNLSE
                     LDLSGLDTSAVTNIYGMFQNCISLEELDLSNFDTSSVTNMYSTFSGCRSLEKLDVSNF
                     DTSSVTNMQFMFEKCSSLEELDLSNFDTSSVTTMSYMFQLCPALKSLYLDNFTDAAIM
                     TGMFGGTTSLTYLFVSHNLSTFNNLENTSWYDEKNWVQFSNLSQLQTYHRQQSEPTGY
                     RKGAFLSLTMDAMGGQFEDAEEQKVQNKVSGEYWDEIVPVKEGHYFDGWYLNQDCTNK
                     FDFSLPADASITIYAKWIENYTVIIPASISLNETSELKVEGINRGDKNLSVGLNRTAM
                     SVSESNKLTLANTADTTVQCLAPLSWDGSETNPEKA"
     gene            complement(1767..3836)
                     /locus_tag="U0290_002656"
     CDS             complement(1767..3836)
                     /locus_tag="U0290_002656"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HEM2302685.1"
                     /translation="MKKLSIRVILIVTIIFIACGSANVSIAQERDIINKLPEVELGSL
                     YTSNLITEEVAQDKPAEVENLEQAPTTDDLVQNPDVLEQPIADSDDSDLTVVNSGDFW
                     TIYRNTVNGEYSLHMFGNVPSSKPTAWNSYLNRIKHIEIEEATLTGNFSSYFRNNVFT
                     VLESVRIERSNLSRVTSFALAFYGSGIEKVIIRDNNYPTAPSLLTTEGMFKNCSNLME
                     VDLSGLDTSAVTTMWDMFNSCRALEELDVSHFDTSSVTNMSYMFYDNRNLEVLDVSNL
                     DTGSVTNMYAMFEDCTSLEELDVSHFDTSSVTDMYRVFNGCEKLKKLDVSNFDTSSAT
                     AMVQMFRNCSALEKLDVSNFNTSLVTDMRAMFAGCTSLEALDVSNFDTSSVTNMAAMF
                     SDNEKLEKLDLSTFDTSSVTNMGTMFKNCTALKSLFLDNFTHAASSTDMFTGTTSLSY
                     LFVSHNVSNFNGLENTSWYDEKNWVQFSNLSQLQTYHRKQSESTGYRKGAFLSLTMDA
                     MGGEFEDAEEQKVQNKISGEYWEEVIPVKEGHYFDGWYLDQNFTNKFDFSLPATVSAT
                     LYAKWVENYTVVIPASISLNEATELKVEGINRGSKTLSVGLNYEETTISESNKLTLAN
                     TADTTVQCLAPLSWDGSETNPKKAILTLAPGSEITEGDAVMEIESPENIQAGKYTGNL
                     VFSINYE"
     gene            complement(3972..6125)
                     /locus_tag="U0290_002657"
     CDS             complement(3972..6125)
                     /locus_tag="U0290_002657"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HEM2302686.1"
                     /translation="MKKFSMRVVLIISVLFIALGNANVSIAQERDTTNKLPEEELSSL
                     DTSNIIAEEVAQEKPAEVENLEEIPTTDELMQNPDVREQPVADSDNPDLTVVSSGAYW
                     TIYRNTVNGEYSLHMFGNVPSSIPSAWKSYLSNIKHIEIEEATLTGSFETYFKSKIGG
                     FLALESVRIERSNLSGVTSFREAFFNPILQKVIIRDNDYPTVPSLLTMESMFENSYNL
                     TELDVSGLDTSAVTNMKNMFYKCSVLKELDLSNWDTSAVNNMNSMFGYCESLEKLNVS
                     NFDTSSVNDMHYMFRDCKALEKLDVSDFDTSSVTTMYGMFVNSTSLKELDVSNFNTSS
                     VTTMQGMFSTCRALEKLDVSNFDTSSVTTMLGMFAACNSLEELDVSNFDTSSVTNMYS
                     MFADCELLEKLDVSHFDTSSVTDMRTMFNNCQSLEKLDVSNFDTSLVTNMQGMFQNCT
                     ALKSLYLDNFTTAKTMTDMFTGTTSLTYLFVSHNLQSFYGLANTNWYDEKNWVQFSNL
                     SQLQTYHRNQSEPTGYRKGAFLSLTMDAMGGEFEDAEEQKVQNKISGEYWEEVIPVKE
                     GHYFDGWYLDQNFTNKFDFSLPAAVSTTIYAKWVENYTVVIPASISLNETSELKVEGI
                     NRGSKTLSVGLNQLATSISESNKLTLANTADTTVQCLAPLSWDGSENNPENAILTLAP
                     GSEITEGDAVVEIESPENIQAGKYTGNLVFSINYE"
BASE COUNT         1864 a         1342 c          985 g         1988 t
ORIGIN      
        1 gctttttctg gattagtttc tgacccgtcc caactcagtg gtgccaaaca ttggactgtt
       61 gtgtctgccg tattggctaa agttagcttg ttgctttcag aaacagacat tgctgttcga
      121 tttaatccca cggacaaatt tttatctcct cgattaatcc cttccacttt caattcagaa
      181 gtttcattta aagaaataga agctggaata atcactgtat agttttctat ccattttgcg
      241 tagatagtta ttgatgcatc agcgggcaat gaaaagtcaa acttattggt acaatcttga
      301 ttaaggtacc acccgtcaaa ataatgtcct tctttcacag gaactatctc atcccagtac
      361 tccccagaaa ctttattttg tactttttgt tcttccgcgt cttcaaactg cccacccatc
      421 gcatccatcg ttaaggaaag gaaggcacct tttctgtagc ctgtaggttc gctttgttgc
      481 ctgtgatatg tctgtagttg cgagagattc gaaaactgca cccaattctt ttcatcatac
      541 cagcttgtat tttctaagtt attaaaagta cttaaattgt gactgacaaa caagtaggtt
      601 agggaggtgg ttccaccaaa catacctgtc ataattgctg catccgtaaa attatccaga
      661 tataaagatt ttaacgctgg acaaagttga aacatgtaag acatagtagt cactgaactt
      721 gtatcaaaat tacttagatc taattcttca aggctactac atttttcaaa catgaactgc
      781 atatttgtaa ctgaactcgt atcaaagttg cttacatcca atttctcaag tgatctacaa
      841 cccgaaaacg tggaatacat attagtaacg gaactggtat caaaattact tagatctaac
      901 tcctcaaggc taatacaatt ttgaaacatg ccatatatat tagttacagc actcgtatca
      961 aggccactca aatcaagctc actaagatta cgacataagg aaaacatata cgtagtagcg
     1021 agtaaagatg gtgctgtcgg ataatcatta tccctaataa taactttttc aattcctgaa
     1081 ttataaaatg ccatgtcaaa agacgtcact ccagacaaat tacactgttc aattctcaca
     1141 ctttcaagta ctgtaaaaac agtacctcta aaatacgctt caaaacttcc tgtcagcgta
     1201 gcttcttcaa tctctatatg tttaatgctt ttcaaataac tattccaagc ggttggtcta
     1261 ctgcttggca cgttaccaaa catacacaag ctatattcat tgttcacagt attacgataa
     1321 atcgtccaaa aatcacctga gctgaccact gttaaatccg tatcatcgga atcagcaaca
     1381 ggctgctcca gaacatctgg attttgcatc aactcatccg taattgggat ttcttctagt
     1441 tgctccacct cggctggttt ctcttgcgcg acttcttctg caatgatatt agaggtatcc
     1501 agagaaccta gctcctcttc tggaagctta ttcgttgtgt ccctttcttg tgcgatagaa
     1561 acattagcgc tcccaaaagc aataaaaagc acagaaataa taaggaccac tcgcatggaa
     1621 aactttttca tcagctcccc tccttctttc ctaattagtt tctagatgcc gaactttcta
     1681 gctgcaattt aattatagag gagtcgaaaa gcttttccgg ccataaaatt ttaacttctt
     1741 aaaattctat ggcttgctta gcaaagttat tcataattaa tcgaaaatac taagttcccc
     1801 gtatattttc cagcctggat attttctggg gattctattt ccatgactgc atcgccttct
     1861 gttatttccg aacctggagc gagggttaaa atcgcttttt tcggattagt ttctgacccg
     1921 tcccaactca gtggcgccaa acattggact gttgtgtctg ccgtattggc caaggttagc
     1981 ttgttgctct cagaaatggt tgtttcctca taattcaaac ctacggataa agttttactt
     2041 ccacgattaa tcccttctac cttcaattca gtagcttcat ttaaggaaat agacgctgga
     2101 ataaccaccg tataattttc tacccatttg gcgtagaggg ttgctgaaac agttgctggc
     2161 aatgagaagt caaacttgtt agtgaaattt tgatcaagat accacccgtc aaagtaatgt
     2221 ccttctttta ctggaatcac ttcttcccag tactccccag aaattttatt ttgtactttt
     2281 tgttcttccg catcttcaaa ttctccaccc atcgcatcca ttgttaagga aaggaaggca
     2341 ccttttctgt agcctgtaga ttcactttgt ttccggtgat atgtctgtag ttgcgagaga
     2401 ttagaaaact gtacccaatt cttttcgtca taccagcttg tattttctaa cccattaaaa
     2461 ttgcttacat tgtgactgac aaacaagtaa gataaagagg ttgttccagt aaacatatct
     2521 gtcgagcttg ctgcatgtgt aaaattatct agaaataaag attttaacgc tgtacaattt
     2581 ttaaacatgg tacccatgtt agtcactgaa ctggtatcaa aggtacttaa atcaagcttc
     2641 tccagttttt cattatcaga aaacatggca gccatattag ttactgaact cgtatcaaaa
     2701 ttacttacat ctaacgcttc aagactagta caaccagcaa acatggcacg catatcagtt
     2761 actaagctcg tattaaaatt acttacatcc aacttctcaa gggcgctaca atttctaaac
     2821 atttgaacca ttgcagtagc ggaactggta tcgaaattac ttacatctag tttcttcagt
     2881 ttttcacagc cattaaacac tctatacata tcagttactg aactcgtatc aaaatgactt
     2941 acatccagct cttcaagact agtacaatct tcaaacatgg catacatatt agttactgaa
     3001 ccggtatcaa ggttgcttac atccagcacc tcaaggtttc tattatcata aaacatgtaa
     3061 gacatattag ttactgaact cgtatcaaaa tgacttacat ccagttcctc aagtgcccta
     3121 cagctgttaa acatatccca catagtagtt accgcactag tatcaagacc actcaaatca
     3181 acctccataa ggttggaaca atttttaaac ataccttccg tagtgagtaa agatggtgct
     3241 gtcggataat tattatctct aatgataact ttttcaattc ctgaaccata aaatgcgagt
     3301 gcaaaagacg tcactctaga tagattcgaa cgttcaattc tcacactctc aagtactgtg
     3361 aaaacattat ttctaaaata cgatgagaaa tttcctgtca aagtagcttc ttcaatctct
     3421 atatgtttaa ttctgttcaa ataactattc caagcggttg gtttactact tggcacgtta
     3481 ccaaacatat gcaagctata ttcaccgttc acagtattac gataaattgt ccaaaaatca
     3541 cctgagttta ctactgttaa atccgaatca tccgaatcgg caataggctg ctcaagaaca
     3601 tctggatttt gcaccaaatc atccgtagtt ggggcttgtt ctagattctc gacctctgcc
     3661 ggtttgtctt gcgcgacttc ttctgtaatg agattagagg tataaagaga acccagctca
     3721 acctctggaa gtttatttat tatatccctt tcttgtgcga tagaaacatt agcgctccca
     3781 caagcaatga aaataatggt aacgattagg atgactcgta tggaaagctt cttcatcagc
     3841 tcccctcctt cttccgtaat tagtttctag ttgctaaaca ttctagctgt tattttatta
     3901 tagaggagta agggggtacc tcgagccata aaattttaac ttcttaaaat tttatggctt
     3961 gcttagcaaa gttattcata attaatcgaa aatactagat ttcccgtata ttttccagcc
     4021 tggatatttt ctggggattc tatttccacg actgcatcgc cttctgttat ttccgaacct
     4081 ggggctaggg ttaaaatggc attttccgga ttattttcgg aaccatccca actcagcggt
     4141 gccaagcatt ggactgttgt gtctgccgta ttggccaagg ttagcttgtt gctctcagaa
     4201 atagatgttg ctaattggtt taatcccacg gacaaagttt tacttccacg attaatccct
     4261 tctactttca attcagaagt ttcatttaaa gaaatagaag ccggaatgac cactgtatag
     4321 ttttctaccc atttggcgta gatagttgta gatacagcag ctggcaatga aaagtcaaac
     4381 ttattagtga aattttgatc aagataccac ccgtcaaagt aatgtccttc ttttactgga
     4441 atcacttctt cccagtactc cccagaaatt ttattttgta ccttttgttc ctccgcgtct
     4501 tcaaattctc cacccatcgc atccattgtt agagaaagga aagcgccttt tctatagcca
     4561 gtaggttcac tttgatttcg atgataggtc tgtagttgcg agagattaga aaactgtacc
     4621 caattctttt cgtcatacca gtttgtattt gccaacccat aaaaagattg taaattgtga
     4681 ctgacaaaca agtaggttag ggaggtggtt ccagtaaaca tatctgtcat agtctttgcg
     4741 gtagtaaaat tatccagata taaagatttt aacgctgtac aattttgaaa catgccctgc
     4801 atattagtaa ccagactagt atcaaaatta cttacatcta atttctcaag tgattgacag
     4861 ttattaaaca tggtacgcat atcagtaaca gaactcgtat caaaatgact tacatctaat
     4921 ttctcaagta attcacaatc agcaaacatg ctatacatat tagtaacgga actcgtatca
     4981 aaattactta catctaactc ttcaaggcta ttacaagcag caaacatgcc cagcatagta
     5041 gtaacggaac tcgtatcaaa attacttaca tccaatttct caagtgctct acaggtacta
     5101 aacatgccct gcattgtagt tactgaacta gtattaaaat tacttacatc taattcttta
     5161 agactggtac tattaacaaa catgccatac atagtagtaa cggaactcgt atcaaaatca
     5221 cttacatcca atttttcaag tgctttacag tccctaaaca tataatgcat atcattcaca
     5281 gaactcgtat caaaattact tacattcaat ttctcaagtg attcacagta tccaaacatg
     5341 ctattcatat tattaacggc actcgtatcc cagttgctta aatccagttc cttaagtacg
     5401 ctacatttat aaaacatgtt cttcatatta gttactgcac tagtatcaag accactcaca
     5461 tcaagctccg taaggttgta actattttca aacatacttt ccatagtgag taaagatggt
     5521 actgtcggat aatcattatc tctgatgatc actttttgaa gtattggatt aaaaaacgct
     5581 tctctaaaag acgttactcc agacaaatta gaacgttcaa ttctcacgct ctcaagcgct
     5641 aagaaaccac caattttact tttaaaataa gtttcaaaac ttcctgtcaa agtagcttct
     5701 tcaatctcta tatgtttaat gttactcaaa taactcttcc aagcacttgg tatactgctt
     5761 ggcacgttgc caaacatatg caagctatat tcaccgttca cagtattgcg ataaatcgtc
     5821 cagtaagcac ctgagcttac cactgttaaa tccggattat ctgaatcagc aacaggctgc
     5881 tctcgaacat ctggattttg catcaactca tccgtagttg ggatttcttc tagattctcg
     5941 acctcggctg gcttctcttg cgcgacttct tctgcaatga tattagaggt atccagagaa
     6001 cttagctcct cttctggaag cttattcgtt gtgtcccttt cttgtgcgat agaaacatta
     6061 gcgttcccca gtgcaataaa aagcacagaa ataataagca ccactcgcat ggaaaacttc
     6121 ttcatcagct cccctccttc tttcgtagtt aatttctaga tgcaaacttt ctagctgca
//
LOCUS       DASDYO010000148         6171 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.148, whole genome shotgun sequence.
ACCESSION   DASDYO010000148 DASDYO010000000
VERSION     DASDYO010000148.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6171)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6171)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6171
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.148"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(34..1380)
                     /locus_tag="U0290_002658"
     CDS             complement(34..1380)
                     /locus_tag="U0290_002658"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464949.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Nramp family divalent metal transporter"
                     /protein_id="HEM2302687.1"
                     /translation="MKKDKTERTKQSWRKAQNAPSLSEVNNSVAIPKNAKFFRKLFAF
                     MGPGALIAVGYVDPGNWATSIAGGSEFGYTLLSVILISNILAVLLQSLASKLGIVTGR
                     DLAQASSDHFSKPFGFVLWILAELAIIATDIAEVIGSAIALNLLFGIPLIWGVCITAL
                     DIFLVLFLQHKGFRYIEVIVITLMVTILVCFGAEMVMSHPDMQAIAKGFIPQSEIVTN
                     PAMLYIALGILGATVMPHNLYLHSSIVQTRQYARTKEGKKEAIRFSFIDSTFSLTIAL
                     LINASILILAAAAFYTTGQHNVAGIEDAYKLLNPTLGSSIASTVFAVALLASGQNSTL
                     TGTLAGQIVMEGFLNIRLKPVVRRLLTRVLAIVPAVIITALYGANGINELLIFSQVIL
                     SMQLSFAVIPLVMFTSDKQKMGEFVNPTWLKIISWAVAIFIAVLNIYLLFYTLTSL"
     gene            complement(1493..2164)
                     /locus_tag="U0290_002659"
     CDS             complement(1493..2164)
                     /locus_tag="U0290_002659"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464950.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302688.1"
                     /translation="MDTLKQLIDYYQTNGSYVMEEFWRHFLMSAYGVIFAAIIAIPLG
                     VYIARKKRLAGWVIQIANIIQTIPALAMLAVLMLIMGLGTNTVVLSLFLYSLLPILKN
                     TYTGIRNVDGALLESGKAMGMTKWQVLRLIEMPLALSVIMAGIRNALVIAIGVAAIGT
                     FVGAGGLGDIIVRGTNATNGTAIILAGAIPTAVMAILADVLLGWVERTLNPVKNKRKS
                     LTEAL"
     gene            complement(2179..3105)
                     /locus_tag="U0290_002660"
     CDS             complement(2179..3105)
                     /locus_tag="U0290_002660"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464951.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="osmoprotectant ABC transporter substrate-binding
                     protein"
                     /protein_id="HEM2302689.1"
                     /translation="MKKKFIALFSVLLLTSSLFLSSCSLPGLGGSSKDTIRIGAMATT
                     ESQIVSNILKELIEHDTGLKVEIVNNLGSTIVQHQAMLNGDVDITATRYTGTDLVGPL
                     GEEAIKDPEKALAAVKKGFEERFHQTWFDSYGFANTYVFMVRQDTAKKYNLNTVSDMR
                     KVENELTAGVDNSWMEREGDGYKAFSKAYDIEFKKIFPMQIGLIYTALKNNQMDVALG
                     YSTDGRIPTYNLKLLKDDKKFFPPYDASALATDEILKKHPELKTTINKLKGKISTEEM
                     QKLNYEADGKLKEPSIVAQEFLQKNNYFEGKN"
     gene            complement(3107..3763)
                     /locus_tag="U0290_002661"
     CDS             complement(3107..3763)
                     /locus_tag="U0290_002661"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464952.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302690.1"
                     /translation="MDAIVTFFQENGHNLLVQTWQHLFISLSAVILGIAVAVPTGILL
                     TRSPKVANFVIGVVSVLQTVPSLAILAFIIPFLGVGTLPAIIALFIYALLPILRNTFI
                     GVRGVDKNLIESGRGMGMTNWQLIINVEIPNSISVIMAGIRLSAVYVIAWATLASYIG
                     AGGLGDFIFNGLNLYRPDLILGGAIPVTILALVVEFALGKLEYRLTPKAIREAREGGE
                     "
     gene            complement(3767..4960)
                     /locus_tag="U0290_002662"
     CDS             complement(3767..4960)
                     /locus_tag="U0290_002662"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464953.1"
                     /note="Members of the family are the ATP-binding subunit
                     of ABC transporters for substrates such as betaine,
                     L-proline or other amino acids, choline, carnitine, etc.
                     The substrate specificity is best determined from the
                     substrate-binding subunit, rather than this subunit, as it
                     interacts with the permease subunit and not with substrate
                     directly; Derived by automated computational analysis
                     using gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="betaine/proline/choline family ABC transporter
                     ATP-binding protein"
                     /protein_id="HEM2302691.1"
                     /translation="MLKFEHVTKTYKGGKKAVNDLTLNIDKGEFVCFIGPSGCGKTTT
                     MKMINRLIEPTEGKIFINDKDIMAEDPVKLRRSIGYVIQQIGLMPHMTIRENIVLVPK
                     LLKWSEEKKQERAKELIKLVDLPEEFLDRYPYELSGGQQQRIGVLRALAAEQNLILMD
                     EPFGALDPITRDSLQEEFKNLQKELGKTIIFVTHDMDEAIKLADRIVIMKAGEIVQFD
                     TPDEILRNPANSFVEDFIGKDRLIEAKPDVTQVAQIMNTNPVSITADKSLQAAITVMK
                     EKRVDTLLVVDEGNVLKGFIDVEQIDLNRRTATSVMDIIEKNVFYVYEDTLLRDTVQR
                     ILKRGYKYIPVVDKDKRLVGIVTRASLVDIVYDSIWGTVEDATENQEEQADSKTTEPE
                     MKQEG"
     gene            complement(5253..5813)
                     /gene="thiT"
                     /locus_tag="U0290_002663"
     CDS             complement(5253..5813)
                     /gene="thiT"
                     /locus_tag="U0290_002663"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464954.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="energy-coupled thiamine transporter ThiT"
                     /protein_id="HEM2302692.1"
                     /translation="MQNKRLIILLECAIFAAVAMVLSFIPLDIGSSFSISLGMIPMYV
                     IAIRRGFWAAGFAGLLWGLLHFLTGKAYILMPSQAIIEYILAFSFIAFSGVFSKQVRS
                     NLAANQLKKAIEWAWGTMIIGGVARYFWHYVAGVLFWGAYAFQGWGAQLFSIVMNGAS
                     CLGTVLVSGIIISILLKTSPKLFLPK"
     regulatory      complement(5881..5991)
                     /regulatory_class="riboswitch"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00059"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="TPP riboswitch; Derived by automated computational
                     analysis using gene prediction method: cmsearch."
                     /bound_moiety="thiamine pyrophosphate"
                     /db_xref="RFAM:RF00059"
     gene            complement(6061..>6171)
                     /locus_tag="U0290_002664"
     CDS             complement(6061..>6171)
                     /locus_tag="U0290_002664"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464955.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MmcQ/YjbR family DNA-binding protein"
                     /protein_id="HEM2302693.1"
                     /translation="DVEAETEFALIKNSYQLIFDKLPKKAQNTVKFSAND"
BASE COUNT         1921 a         1234 c         1074 g         1942 t
ORIGIN      
        1 ttacataata taattattgt cttcttccct tatttataat gacgtcaaag tataaaataa
       61 caagtagatg tttaagactg caataaaaat ggcgacagcc caagaaatga tttttaacca
      121 tgttggattg acgaattcgc ccatcttttg tttatcactt gtgaacataa ctaatgggat
      181 aactgcgaac gataattgca ttgatagaat aacttggcta aaaatgagta gttcattgat
      241 accatttgcc ccgtaaagtg ctgtgataat aacagctgga acgattgcaa gtacacgtgt
      301 taacaaacgg cgcactactg gttttaaacg gatattaagg aaaccttcca tgacgatttg
      361 accagctaat gttcctgtta aagtagaatt ttgccctgat gcgagtaatg ctactgcaaa
      421 aacagtgctg gcgatactgc ttccaagtgt tggattgagt aatttgtaag catcctcaat
      481 accagcgaca ttatgctgac cggtcgtata aaaagcggca gccgctaaaa ttaaaatcga
      541 tgcattgatt aataatgcaa tcgttaaaga aaaagtggaa tcgataaagg aaaaacgaat
      601 cgcttctttc ttcccttctt ttgttcgagc gtattgtctg gtttgaacaa tagatgaatg
      661 caaatataaa ttatgtggca tcactgttgc cccaagaata ccaagtgcaa tataaagcat
      721 agctggatta gtaacaattt ctgattgtgg aataaaacct tttgctattg cttgcatatc
      781 aggatgagac atcaccattt ccgcaccaaa acatacaaga atcgtaacca ttaaagtaat
      841 aacaataact tctatgtagc ggaaaccttt atgttgtaaa aataatacga gaaaaatatc
      901 taatgcagta atacaaactc cccaaattaa tggaatccca aatagtaaat taagcgcaat
      961 cgcactaccg atgacttctg cgatatctgt tgctataatc gctaattcag ctaaaatcca
     1021 aagaacgaat ccaaatggtt tagaaaagtg atcacttgaa gcttgggcta aatcgcgacc
     1081 ggtgacaatg cctaattttg atgcaagtga ttgtaataaa acggctagaa tattagaaat
     1141 taaaataacg gataacaatg tgtaaccaaa ttctgacccg ccggcaatag aagttgccca
     1201 gttccctgga tcgacatagc cgaccgcaat aagtgcacct ggccccataa aggcaaataa
     1261 tttacggaaa aattttgcgt ttttaggaat agctacggaa ttatttactt cgcttaagct
     1321 gggagcattc tgtgcttttc tccagctttg ttttgtacgt tctgttttat cctttttcat
     1381 gctccctgac cttctttcgt ttatgataaa aagtttacta cgggaaacat tctttgtcaa
     1441 acgaaaaaca caaccgtttt atagaaatga taggttgtgt tttcgtatat ttttataagg
     1501 cttcagttag tgattttctt ttgtttttaa ctgggtttag tgtgcgttcg acccaaccga
     1561 gaagtacatc ggctaatatg gccataactg cggttgggat agcaccagct aaaatgatag
     1621 cagtaccatt tgttgcattt gttccgcgta caataatatc accgagacct cccgctccaa
     1681 cgaatgtccc aattgccgct acaccaatag caataacaag tgcatttcga atacctgcca
     1741 taataacaga taatgcgagt ggcatttcta tgaggcgtag tacttgccat tttgtcatcc
     1801 ccatcgcttt accagattct aaaagtgcgc catcaacgtt tctaatgccc gtataggtgt
     1861 tttttagaat tggtagtaaa gaatatagga ataaggataa gacgactgta ttcgtcccta
     1921 agcccattat aagcataagt acggctaaca ttgctagtgc cggaattgtt tggatgatat
     1981 tagcgatttg gataacccag ccagctaagc gtttttttct tgcaatatat actccgagcg
     2041 gtattgcgat gattgctgcg aagataactc cgtaagcact catcaagaaa tgccgccaga
     2101 actcttccat gacataactt ccatttgttt ggtaataatc aattaattgt tttaatgtgt
     2161 ccatcttttg gcacctcctt agtttttacc ttcaaagtaa ttattttttt gcaagaattc
     2221 ttgcgctacg atggacggtt ctttcaattt gccatccgct tcataattaa gtttttgcat
     2281 ttcttctgtc gaaattttac cttttaattt attgatagtc gtttttaatt ctggatgttt
     2341 ctttaaaatt tcatctgttg ctagagctga agcatcatat ggtgggaaga attttttatc
     2401 atcttttaat agttttaaat tgtaagttgg gatacgtccg tctgttgaat aaccaagcgc
     2461 cacatccatt tgattgtttt taagcgctgt gtagattaag ccaatttgca ttggaaatat
     2521 tttcttgaat tcaatatcat aggcttttga aaatgcttta tagccatcgc cttcacgttc
     2581 catccaagaa ttatcgacac cagctgtgag ctcattttct acttttcgca tatcacttac
     2641 ggtgtttaaa ttgtattttt tcgcagtgtc ttggcgtacc ataaacacat acgtattagc
     2701 aaagccgtaa gaatcaaacc aggtttggtg gaaacgttct tcaaaacctt tcttaacagc
     2761 tgctaaagct ttttctggat ctttaattgc ttcttcacca agtggaccaa ctaaatctgt
     2821 accggtatat cttgttgcag taatatctac atccccattt aacatcgctt ggtgctgaac
     2881 gatagttgat ccaaggttgt tgacgatttc tacttttagg ccagtatcat gttcaattaa
     2941 ttcttttaaa atattcgaaa cgatttgaga ttcagttgtt gccattgcac cgatgcgaat
     3001 agtatctttg gaactgcctc caagtcctgg taaagaacag ctagataaga aaagagaact
     3061 agttagtagt aatacgctga ataacgcgat aaattttttc ttcatgttat tctccccctt
     3121 cccgagcttc acggatggct tttggagtta gacgatattc taattttcca agcgcgaatt
     3181 ctactacaag ggctaaaatg gtaacaggaa ttgccccacc aagaattaaa tctgggcggt
     3241 ataagtttaa accattaaaa ataaagtctc ctagtccacc tgctccaatg taagaagcaa
     3301 gtgttgccca agcgataaca tatactgcag ataaacgaat accagccata ataacggaga
     3361 tggagttagg aatttcgaca ttaataatta gttgccaatt cgtcatcccc atgcctcgac
     3421 cagattcgat taaatttttg tcgactcctc gaacaccaat aaacgtgttt cgtaaaattg
     3481 gtaaaagtgc gtaaataaat aacgcaataa tcgctggtaa agtaccaaca ccaagaaacg
     3541 gaataataaa cgccaaaatg gcaagagaag gaacggtttg caaaacacta acaacaccaa
     3601 ttacaaaatt tgctactttt ggtgagcgtg taagtaaaat cccagttggt actgcaaccg
     3661 caatacctaa aataacagca gatagggaga taaataaatg ttgccatgtt tgaacaagca
     3721 agttatggcc gttttcttgg aaaaatgtaa caattgcgtc catagcttat ccctcctgct
     3781 tcatttctgg ttctgtcgtt ttggaatccg cctgttcctc ctgattttct gtcgcatctt
     3841 ctaccgtacc ccaaatggag tcatacacga tatccactaa gctggcacga gtaacaattc
     3901 cgacaagtcg tttatcttta tccactacag gaatgtattt atagccgcgt tttagaatcc
     3961 gttgtacagt atcgcgaagc aaggtatctt catacacata aaagacattt ttctcgatga
     4021 tatccatgac agaagttgcc gtacgacgat ttaaatcaat ttgctctaca tcgataaatc
     4081 ctttcaacac gttaccttca tcgacaacaa gtaatgtatc tactcgtttc tctttcatga
     4141 cagtaatcgc agcttggagt gatttgtccg ctgtaataga gactggattt gtgttcatga
     4201 tttgtgctac ttgtgtaaca tctggtttcg cttcaattaa gcgatcttta ccgatgaaat
     4261 cttctacaaa cgaattcgca gggttacgca aaatttcatc tggagtatca aattgaacaa
     4321 tttcaccagc tttcataatg acgatacggt ccgccagttt aatcgcttca tccatatcat
     4381 gggtaacaaa aataatcgtc ttgccaagtt ctttttgcaa atttttgaat tcttcttgta
     4441 gggaatcacg agtaattgga tctagtgctc caaaaggttc atccatcaga attaagtttt
     4501 gctctgctgc aagcgctctt aaaacaccga tacgttgctg ctgtccacca cttaattcgt
     4561 aagggtaacg gtccaaaaac tcttctggta aatctactaa tttaattaat tcttttgccc
     4621 gttcttgttt tttctcttcg gaccatttaa gtaattttgg tacaaggacg atattttcac
     4681 gaatcgtcat atgtggcatc aagccaattt gctgaataac ataaccaata gaacgtctta
     4741 gtttgacggg atcttccgcc atgatgtctt tatcattaat aaatattttt ccttctgtag
     4801 gttcaataag ccggttaatc atcttcattg ttgtcgtttt cccacaacca cttggaccga
     4861 taaaacaaac aaattctcct ttatcgatgt ttagtgttag atcattaact gcttttttgc
     4921 cccctttata agtctttgtt acgtgttcga attttaacac gcttacacac ctccattttt
     4981 tctttaccaa taccaaaaaa attggcaatc ggtaactaat ttccctaact agtatagatt
     5041 taaacttttt aaatacaaaa aaacagctta aagacagtgt tacattcaaa cggaagttac
     5101 taaacaagat gatttcgtac ttgtggcacg tgtgacatcg atgctaaact cgtaatcgtg
     5161 aaaatgagca ttgtaataag ctgcaatata gtatttattt aattataaca cacttaaaaa
     5221 ggcccaaaag caattgcttc tggacctttt ggttattttg gtaaaaataa ttttggtgaa
     5281 gtcttcaata atatcgaaat aatgatacct gaaacaagga cggtaccaag gcaactagct
     5341 ccattcatca cgattgaaaa tagttgtgct ccccaacctt gaaatgcata agcaccccag
     5401 aataatactc ctgcgacata gtgccaaaaa tatcgagcta ctcctccaat aatcatggtt
     5461 ccccacgccc attcaattgc ttttttgagt tgattagcag ctaaattact tcgaacttgc
     5521 ttgctaaaga caccgctgaa agcaataaaa ctgaatgcca aaatatactc aataattgcc
     5581 tgggagggca ttaatatata tgccttacct gttaagaaat gtagtaaccc ccataacaat
     5641 cctgcgaatc cagccgccca aaaaccgcgt cgaatcgcga taacatacat tggaatcatt
     5701 ccaagcgaga tggaaaaact ggaaccaatg tctagcggga tgaaacttaa taccatcgca
     5761 actgcagcaa agatagcaca ctcaagtaaa atgattaatc gtttgttttg cataaaaaat
     5821 aaactcccct cttctttttg gtcaaaaacg taccccagaa gaaagcagtt tctattgtta
     5881 gaaatgcaat cgccacaatc cctacgctcg tattaacgaa caggttcaaa gggtcagaat
     5941 ccaaaaacac gtggactcaa tctcagctaa gaagcccccc ctgtggtaac gtctatgaaa
     6001 ttatcgtaca acaattatta tagcatgcac ttcttttttg taaagaatta tttgttttct
     6061 ttaatcattt gcagaaaatt ttacagtatt ttgtgctttt ttcggtagtt tatcaaaaat
     6121 aagctgataa ctatttttga ttaaggcaaa ttcagtttct gcttccacat c
//
LOCUS       DASDYO010000149         6083 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.149, whole genome shotgun sequence.
ACCESSION   DASDYO010000149 DASDYO010000000
VERSION     DASDYO010000149.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 6083)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 6083)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..6083
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.149"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..402)
                     /locus_tag="U0290_002665"
     CDS             complement(<1..402)
                     /locus_tag="U0290_002665"
                     /inference="COORDINATES: protein motif:HMM:NF025107.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2302694.1"
                     /translation="MENEIRVKGIFEQGYGIIAKALMRDKDLSIEAKSIYSYLASFAG
                     AGNTAFPSVELIIAELNISRDRFYKHRKQLVEKGFITVIQKKGDKGLQQRNIYQLNPI
                     LKPQSSFKDTDSPQSNYPESSFPQSDNTYSNN"
     gene            complement(408..1151)
                     /locus_tag="U0290_002666"
     CDS             complement(408..1151)
                     /locus_tag="U0290_002666"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731481.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MBL fold metallo-hydrolase"
                     /protein_id="HEM2302695.1"
                     /translation="MMSSNLHRLLDLINMEIKTIASGSTGNAYVISSGRSQLLIECGV
                     NFDKIRKALNFDLSAVEACLISHEHGDHVAGVKKMLRTSSIKIYASEGTLSALNVPDS
                     RQFILKEKNAQNIGEWIILPFQTEHDAKEPLGFMIQRNNERLLFITDSYFVRYKFKNI
                     NYLMIECNYSADILEENVINKVIHPVQKKRVLQSHFSLENVKEFLNANDLSQLREIHL
                     LHISSSNGDPNMFKNEIQALTGVPVYVLE"
     gene            complement(1111..1896)
                     /gene="bet"
                     /locus_tag="U0290_002667"
     CDS             complement(1111..1896)
                     /gene="bet"
                     /locus_tag="U0290_002667"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731480.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage recombination protein Bet"
                     /protein_id="HEM2302696.1"
                     /translation="MMAKENYSDPNGKLLNSITTFEVNGEEVKLSGNIIRDYLVSGNA
                     EVTDQEIIMFLQLCKYQKLNPFLNEAYLVKFKNTKGPDKPAQIIVSKEAFMKRAETHE
                     QYDGFEAGVIVERGGEIIELEGAVSLASDKLLGGWAKVFRKDRNRPVSVRISEKEFNK
                     RQSTWNTMPLTMMRKTAVVNAMREAFPDNLGAMYTEEEQGSLQNTETSVQQEIKQNAN
                     AEVLDIPSQQNEVPDFKEVREPEHVEMPPIYDEQQSTPPARPY"
     gene            complement(1897..3840)
                     /locus_tag="U0290_002668"
     CDS             complement(1897..3840)
                     /locus_tag="U0290_002668"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987342.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2302697.1"
                     /translation="MKTIKLLKLQLENFKGIKELEIDFQDNTSIYGANASGKTTILDA
                     FTWLLFDKDSTNKKDFAIKTLDTEGNVIHKLNHVVTAVLNIDGEQIELSKKYMEKWTK
                     SRGKLEQELTSHTTEYYIDEIKKKANEYKSFISELLDEELFKLITNPLYFNEQFDWKK
                     RRAMLIKIAGDVTDAEVMSADDSLKDLRIFLGKHSIEDKLIQINEQRKNLRKRLELIP
                     ELVNEASKAKQDTTGLNPSDLSGELTVIEEQIQLIEQEKITLKNGGIQTELNKQKANI
                     ELELTKIKANEQKEVQEQLMNKKEEIFTERNGLKNVENEIVESAFLIQRKQEELATKH
                     QELIKLGNEWDTLQVERFDEHRKSCPTCGQDFPSNHLNSMIEKFNQEKAEKIKANELA
                     GKSTKDEINQIETDITEIEFKINNQYKNKQTEFQSKLEILDQQKAELESQLKQVENST
                     TYIEKQSELEMIEEKLRDEKGSSINAVAEIQIKIDKLNAEASDLKADLAKFDSNQKQE
                     NRIQELEEEAAEKGAKYDELEMGLYLIERFNKAKCNLLEDKINSKFKYVSFKLFKTQI
                     NGGIDECCETIYNGVPYNSGLNNAARINGGLDIINALTEHVQVLAPIFVDNRESVTEL
                     IDTESQLVSLIVSESDENLRVEA"
     gene            complement(3827..4168)
                     /locus_tag="U0290_002669"
     CDS             complement(3827..4168)
                     /locus_tag="U0290_002669"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731478.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302698.1"
                     /translation="MTQKSIEEVKFEEAKKLITELQAIATFNESITCAVNVSFNDGKG
                     IHSASSAIGGKSELLKMYGDIAEAIVYEFMKDHDCVCNVNETIEHAIEGALNGFQNFK
                     QDAKEKTDENN"
     gene            complement(4186..4413)
                     /locus_tag="U0290_002670"
     CDS             complement(4186..4413)
                     /locus_tag="U0290_002670"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731477.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302699.1"
                     /translation="MQIKTNELIEILKNSRTHSLERVKALEINLFKYKRLNTKPPAQL
                     TERIANHEKKIETIKKLEDELKQSENEVCKF"
     gene            complement(4593..4877)
                     /locus_tag="U0290_002671"
     CDS             complement(4593..4877)
                     /locus_tag="U0290_002671"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302700.1"
                     /translation="MEEIRPLYKKIKIEDTTYIVTLTPINDKSGKKTFKGIMVDMSLD
                     GEHFARDRFASNVDTGVIQNWMLNMHKASQKVERVLEAFEEWDGELNEFW"
     gene            complement(5027..5191)
                     /locus_tag="U0290_002672"
     CDS             complement(5027..5191)
                     /locus_tag="U0290_002672"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990851.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302701.1"
                     /translation="MLTAVLITLSLGIVMNIALYAYQKGWEKKNVDTDLDSDCVDTRV
                     TRSDKPNRKC"
     gene            complement(5356..5880)
                     /locus_tag="U0290_002673"
     CDS             complement(5356..5880)
                     /locus_tag="U0290_002673"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731473.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302702.1"
                     /translation="MTVIKSSINASKVMRYVDNIPQKQLADLLLTSRPNVSHMQTGRR
                     RMQQDIATSALNNVQSNLFKLALTHEFSELIPDVFDGPAINKNSLSYLVMYEQEANEF
                     SANIDEIMRIFVKPASQLTQGERLTARDGLKELIDALGWGYNLLFYASDYLNIDAHKL
                     ISEQDESWKMKKWI"
     gene            complement(5957..>6083)
                     /locus_tag="U0290_002674"
     CDS             complement(5957..>6083)
                     /locus_tag="U0290_002674"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990848.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302703.1"
                     /translation="QCGIPKNTYASIEQGKRRPSPERAKIIASNLGFDWTIFFNN"
BASE COUNT         1607 a         1220 c          866 g         2390 t
ORIGIN      
        1 attattactg tacgtgttat ccgactgcgg aaaactcgac tccggataat tcgactgcgg
       61 actatccgtg tccttaaaac tcgactgcgg ctttaaaatg gggtttagtt gatatatatt
      121 tctttgttgt agacctttat cacccttttt ttgaattaca gtgataaatc ctttctcaac
      181 tagttgtttc cggtgcttat aaaatctatc tctactaata tttaattctg caataataag
      241 ttcgacagaa ggaaatgccg tatttcctgc acccgcaaaa cttgcaagat aggaataaat
      301 gctcttagct tcaatactca agtctttatc tcgcatcaaa gcttttgcta ttattccgta
      361 tccttgttca aatattcctt tcacacgaat ttcgttttcc atttttttca ctccagtaca
      421 taaactggca caccagttaa tgcttgaatt tcatttttaa acatattggg atctccgttg
      481 ctagaagaaa tgtgtagcaa gtgaatttct cttagttgcg ataagtcatt tgcgttcaaa
      541 aactctttta cattttctaa gctgaaatgc gattgtaaaa cacgcttttt ttgaactgga
      601 tgtataactt tatttattac attttcttct aaaatatctg ctgaatagtt acactcaatc
      661 attaaatagt tgatgttttt gaatttgtat cttacaaaat aactatctgt aatgaaaagt
      721 agtctttcat tattgcgttg aatcataaaa ccaagtggct cttttgcatc atgttcagtt
      781 tgaaacggta aaataatcca ttctccgatg ttttgagcgt ttttttcttt taaaatgaat
      841 tgtcgactgt ccggaacatt taaagcagac aaggtgcctt ctgatgcgta tatcttaatg
      901 cttgatgtgc gtaacatctt tttgacgcca gcgacgtgat ctccatgctc gtggctaatt
      961 aaacaggctt ccactgccga taaatcaaaa tttagtgctt ttcttatttt gtcgaagttt
     1021 acaccacatt caattagcag ttgggagcgc ccgctactaa taacgtaggc gttccctgta
     1081 cttccacttg ctattgtctt aatttccata ttaataaggt ctagcaggcg gtgtagattg
     1141 ctgctcatca tatatcggtg gcatttctac atgctcgggc tctcttactt ctttaaaatc
     1201 tggcacttca ttttgctgtg aaggaatatc taacacttct gcattagcat tttgtttaat
     1261 ttcttgttga acacttgttt cagtgttttg tagcgaacct tgttcttcct ctgtatacat
     1321 ggcacctaag ttatccggaa aagcttctct catcgcatta acaactgcgg tcttacgcat
     1381 cattgttaga ggcatggtat tccaagttga ttgtctttta ttaaactctt tttcactgat
     1441 tcttacacta actggcctat ttctatcttt tctaaaaacc tttgcccagc cccctaataa
     1501 tttgtctgag gctagagaaa ctgcgccttc taattcaata atttcaccgc ccctttccac
     1561 aattacacct gcttcgaatc cgtcatattg ttcatgtgtt tcagcacgtt tcataaatgc
     1621 ttctttagaa acaattattt gtgcgggttt atctggacct tttgtatttt taaatttaac
     1681 taggtaggct tcgttaagaa atggatttaa tttttgatat ttacataact gcaaaaacat
     1741 gattatttcc tggtctgtaa cctctgcatt tccacttact aaataatccc taataatatt
     1801 gccagatagc tttacttctt ctccattcac ttcaaatgtc gttatactat tgagcaattt
     1861 tccgtttggg tcgctataat tctcttttgc catcatttat gcctccactc tcaaattttc
     1921 atctgactca gaaacgatta agctaactag ctgtgattct gtatcaatta gttcagttac
     1981 cgactctcta ttatctacaa aaattggagc aagcacttga acatgctctg ttagtgcgtt
     2041 aataatgtcc aaaccaccgt ttattctagc ggcattgttc aatccggaat tgtaaggaac
     2101 accgttgtaa atcgtttcac agcactcatc aatcccaccg ttaatttgcg ttttaaataa
     2161 cttgaatgaa acatatttga acttgctgtt aatcttgtct tcaagaagat tacattttgc
     2221 tttattaaat cgttcaatga gatataatcc catttccaat tcgtcgtact tagcgccttt
     2281 ttctgctgct tcctcttcta attcctgaat gcgattttct tgtttctgat tgctatcaaa
     2341 ttttgctaaa tcagctttta aatcacttgc ttcagcattc aatttatcaa ttttgatttg
     2401 aatctctgct actgcattta tagaagaacc tttttcatca cgcagttttt cttcaatcat
     2461 ttccagttca gattgtttct cgatgtaagt agtagagttt tcaacttgtt tcagttgcga
     2521 ttctaactct gctttttgtt gatctaatat ttctagtttc gattgaaatt cagtctgttt
     2581 attcttatat tgattgttaa ttttaaattc tatttcagta atatccgttt caatttgatt
     2641 tatttcatct tttgtcgatt ttccagctag ttcatttgct ttgattttct ctgctttttc
     2701 ctgattaaat ttttcaatca tagaatttaa atgattagaa gggaaatctt ggccacaagt
     2761 tggacatgat ttgcgatgtt cgtcaaaacg ctctacttgc aatgtatccc attcattgcc
     2821 tagctttatt aattcctgat gcttggtagc taactcttct tgtttacgtt gaataagaaa
     2881 agcagattct acaatttcat tttctacatt tttaagtcca tttctttcag taaatatttc
     2941 ttcctttttg ttcatcagtt gctcttgtac ttctttttgc tcatttgctt tgatttttgt
     3001 aagctcaagt tcaatattcg ctttttgctt atttagttcg gtttgtattc cgccgttttt
     3061 caaagtaatt ttttcttgtt cgataagttg aatctgttct tcaattactg ttaattcccc
     3121 tgaaagatca ctaggattta agccggtagt atcttgtttg gctttagaag cttcatttac
     3181 aagttcgggg ataagttcta atcttttacg caagttcttg cgctgttcat taatctgaat
     3241 taatttatct tcaatcgagt gctttccaag aaagatcctt aaatctttca gtgaatcatc
     3301 tgcactcatt acttctgcgt ctgttacatc gcctgcgatt ttaattagca ttgcacgtct
     3361 ttttttccag tcaaactgtt cattgaagta caatgggtta gtaattagtt tgaaaagttc
     3421 ctcgtctagt agctcgctaa taaatgactt gtattcattc gctttctttt tgatctcgtc
     3481 gatataatat tctgtagtat gacttgttaa ctcttgttct agttttcctc ttgatttggt
     3541 ccacttctcc atatattttt tagataattc tatttgctcg ccgtcgatat tcaatactgc
     3601 agttacaaca tgattcaact tgtgaataac gttgccttca gtatccagcg ttttaatagc
     3661 aaagtctttt ttatttgtgc tgtctttatc gaataaaagc caagtaaaag catctagtat
     3721 cgttgttttc cccgaagcat tcgctccgta tattgatgta ttatcttgaa aatcaatttc
     3781 tagttccttg atacctttaa aattttctag ttgaagcttt agcaatttaa ttgttttcat
     3841 ctgttttctc ctttgcatct tgtttgaaat tttgaaatcc atttaatgcc ccttctattg
     3901 catgttcaat ggtttcattc acgttgcaca cacaatcatg gtccttcata aattcatata
     3961 caattgcttc ggcgatgtcc ccatacatct ttaagagttc gcttttccct ccaattgcag
     4021 atgacgcact gtgtatacct tttccatcat tgaagcttac attcacggca caagttatgc
     4081 tttcattaaa tgtagcaatt gcttgtaact cagttattaa tttttttgcc tcttcaaatt
     4141 tcacttcttc aatacttttt tgtgtcatct tgaatcctcc aatttttaaa atttacaaac
     4201 ttcattttct gattgcttca attcgtcttc taattttttt attgtttcaa tcttcttctc
     4261 gtgattagca atcctttcag ttagttgtgc cggtggtttc gtgtttaatc gtttgtactt
     4321 gaataaatta atctctaaag ccttgaccct ttctaatgag tgggttcttg aattctttaa
     4381 aatttcaatg agctcattag tcttaatttg cataataaag acccctttct aaaaaaataa
     4441 atttgtcaaa acggggctaa tcgcatatac tataagtaat tcaactctta tatttagcga
     4501 atagctatct atgtcagact cgtgttagcg cacgagttta tttttttgtc gttacaatca
     4561 ttactccttc tacaatcgtg atgctttgtg tatcaccaga attcattcaa ttcaccatcc
     4621 cactcttcaa aagcctcaag aactctttca actttctgcg atgctttatg catgttcaac
     4681 atccaatttt gaataactcc agtgtctaca tttgaagcaa atctatctct agcaaaatgt
     4741 tcaccgtcta aggacatatc taccatgatt cctttgaaag ttttctttcc gctcttatca
     4801 ttgataggtg ttaaagtcac aatatacgta gtatcttcaa tcttaatttt tttatacagt
     4861 ggtcttattt cctccatttt ctaaatcctc cttcttcgct tttaaaagcc actattaatg
     4921 ctacaaacac tccaaatcca acaaacaata atcctatatt catttgtaaa tccagctttc
     4981 ataccagtta gccaagccaa ctttttttat cttcttgtat aaccttttag cattttctat
     5041 taggtttatc agaccgagta acacgagtat ccacacaatc gctatccaaa tcggtatcga
     5101 catttttctt ttcccaaccc ttctgatacg cataaagcgc tatattcatt acaattccaa
     5161 gactcagtgt gattaatact gctgttaaca tttttttcgc tcctcttctt ctagtttttt
     5221 tattattcgc ggaaaagagc ggcttttaaa gaagttaaac atagcttgtt cttgctcttg
     5281 agttagttct gtataaacta tttcaacctt cacagcattt tccttatcac aaactttgct
     5341 catatttcca acacctcaaa tccatttttt cattttccag ctttcatctt gctcacttat
     5401 taatttatgt gcatcaatgt ttagataatc acttgcataa aataaaaggt tataacccca
     5461 accaagcgca tcgattaatt ccttcaaacc atctcttgcg gttagccttt ctccttgtgt
     5521 taattggctt gctggcttta caaaaatcct cattatctcg tcaatatttg cactgaattc
     5581 attagcttct tgttcataca tgacaagata tgataacgaa tttttattaa ttgcaggacc
     5641 gtcaaaaaca tctggaatta attcactaaa ttcatgcgtt agtgctaatt tgaataaatt
     5701 actttgcaca ttatttaatg ctgaagttgc aatatcttgc tgcatccttc ttctacctgt
     5761 ttgcatatgg cttacattag gtctacttgt caaaagtaaa tccgctaatt gtttttgagg
     5821 aatattatcc acataacgca taacttttga tgcgttaatt gaagatttaa ttactgtcac
     5881 ttgctctcct ttccgatgta tcattttttt tacgcatgat acatatcctt aagttaaaat
     5941 aatacatatc gcgtacttaa ttgttaaaaa aaatagtcca gtcgaatccc aaattgctcg
     6001 cgattatttt cgcgcgttcg ggagaaggcc gtcttttacc ctgttcaata gatgcatatg
     6061 tgtttttagg tataccgcat tga
//
LOCUS       DASDYO010000150         5995 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.150, whole genome shotgun sequence.
ACCESSION   DASDYO010000150 DASDYO010000000
VERSION     DASDYO010000150.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5995)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5995)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5995
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.150"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..574
                     /locus_tag="U0290_002675"
     CDS             <1..574
                     /locus_tag="U0290_002675"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="helicase SNF2"
                     /protein_id="HEM2302704.1"
                     /translation="HELAVKWHYIRHDFSIDEELLKQYYEIKEDYLQKAAAYTININF
                     LEMSQVMQHCYCLSSEKFTITESLIAGKEETTIIFCKYRRSEEALQQAFPNVKITTFA
                     KSSYGLNLQFYNQIIYFDKTFDYSQRDQSERRIYRTGQTQDCYYHDLSGNVGLDSLID
                     TNISKKTSLLQEFKKELSQKNSFEVIMDAF"
     gene            564..1868
                     /locus_tag="U0290_002676"
     CDS             564..1868
                     /locus_tag="U0290_002676"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3440 domain-containing protein"
                     /protein_id="HEM2302705.1"
                     /translation="MLSRTVFDASQERMEAIFSEFDNIIVSFSGGKDSAVMLHLMIDY
                     MRKNNIRKKIYVYHLDYEGQYSATTDFVTEMLTTNLDIIEPLWCCLPIAAQSAVSMFT
                     DHWKPWEKTKQNIWVRDMPTFPHVINEDNAPFDFDFENLWDYEFNKKIINWLHTKNNA
                     QKTIALIGIRQQESLNRYNAIHKKERMYKTYNWTTEISKNIYNAYPIHDWQVEDIWVA
                     NAKFNWSYNKIYDLFYHAGLTVHEMRVASPFNDAATESLKLYRVIEPALWSKLVGRVN
                     GANFTAIYGGTSAMAWKEIKLPKNHTWKSYLEFLLTTLPSYTRERYLKKFKTSITYWT
                     EKGGALKVEIVEELKNLDIQADFLGKPQNNRVYTNPMEIVRFKEYPDDLKIKEFASVP
                     TYKRMCIAILKNDYTCKYMGFGQTKLELEKRKNALEKYNNIL"
     gene            1878..2384
                     /locus_tag="U0290_002677"
     CDS             1878..2384
                     /locus_tag="U0290_002677"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464834.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ParB-like nuclease domain-containing protein"
                     /protein_id="HEM2302706.1"
                     /translation="MNYKSPVYSVTPIHYTKLQANNYNPNTVPATELKLLEKSIWEDG
                     FTQPIVCYPLEDSDKYEIIDGFHRYTIMRTSKRIRERENEFLPVVILEKDTVNRMAST
                     IRHNRARGFHNVELMSNIVSELVDSGMSDSWIMKNIGMDANEILRLKQVSGLAHLFLD
                     KEFSHTSD"
     gene            2406..3137
                     /locus_tag="U0290_002678"
     CDS             2406..3137
                     /locus_tag="U0290_002678"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917797.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2302707.1"
                     /translation="MKENKYDDKHFFEQYSQMPRSKEGLKAAGEWHELKKMLPDFNQK
                     TVLDLGCGFGWHCIYAAEHGAKKVLGIDLSERMLTEAKRKTTSPVVCYEQKAIEDIAI
                     EPDAYNVVLSSLALHYIASFDDICKKVYINLKSSGSFIFSVEHPVFTADGRQDWYTDE
                     TGNKLHWPVDRYFNESMRTSHFLGEDVQKYHRTVTTYIQTLLKNGFQINSVIEPEPAP
                     ELKDLPEMQDEYRRPMMLLISATKQ"
     gene            complement(3186..3425)
                     /locus_tag="U0290_002679"
     CDS             complement(3186..3425)
                     /locus_tag="U0290_002679"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464831.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YneF family protein"
                     /protein_id="HEM2302708.1"
                     /translation="MWIYILVGIICLLAGLAGGFFIARRYMMSYLKNNPPINEQMLQM
                     MMAQMGQKPSQKKINQMMSAMNKQQEKEKPKKTKK"
     gene            complement(3646..5640)
                     /gene="tkt"
                     /locus_tag="U0290_002680"
     CDS             complement(3646..5640)
                     /gene="tkt"
                     /locus_tag="U0290_002680"
                     /EC_number="2.2.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464830.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transketolase"
                     /protein_id="HEM2302709.1"
                     /translation="MFDNTDSLAVNTIRTLSMDAIQKANSGHPGLPMGAAPMAYALWS
                     RVLNTNPKNSHWFNRDRFVLSAGHGSMLLYSLLHLSGFKLELEDLKNFRQWESKTPGH
                     PEYRYTDGVDATTGPLGQGIAMAVGMAMAERHLEAKYNKDGFPVVDHYTYALCGDGDL
                     MEGVASEAASYAGHQQLGRLVVLYDSNDISLDGDLDKSFSENVKQRFEAYGWEHLLVK
                     DGNDTAEILAAIEKAKQNTSQPTMIEVKTVIGFGAPNAGTSKVHGAPLGDEGILEAKK
                     AYGWNYEEKFFVPEEVTARFKETIGERGEKAETAWNELFASYKAEYPELAKQLEDSLN
                     NKLPADWDEDLPVYDDSKALASRASSGEVINALAGKIPTIFGGSADLAGSNNTTIKTD
                     GEFTKATPAERNIWFGVREFAMGAALNGMALHGGLQVYGGTFFVFSDYVRAAIRLSAI
                     QHLPVTYVMTHDSIAVGEDGPTHEPIEQLASLRAMPGLSVIRPADGNEVVEAWKLAIT
                     STSTPHVLVLTRQGLPTLPNSAKLTAEGVKKGAYVISPAKGDVPEAIILASGSEVNLA
                     IEAQKELQAQGTDVSVVSVPSFDLFEQQSAEYKESVLPNAVRKRVAVEMGASFGWERY
                     VGLDGKVIGIDKFGASAPGETVIKNYGFTVENVVNTVKSL"
     gene            complement(5787..>5995)
                     /locus_tag="U0290_002681"
     CDS             complement(5787..>5995)
                     /locus_tag="U0290_002681"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464829.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DUF896 domain-containing protein"
                     /protein_id="HEM2302710.1"
                     /translation="DRINELSKKKKAGTLTATEKVEQDNLRKEYIKSFRTHMKGTIEN
                     TTIIDPNGKDVTPHKVKQLRKNKH"
BASE COUNT         1962 a         1152 c         1020 g         1861 t
ORIGIN      
        1 gcacgaatta gccgtcaaat ggcattatat tcgtcatgat ttttccattg atgaggaact
       61 tttaaagcaa tattatgaaa taaaagaaga ctatctccaa aaagctgccg catatacaat
      121 caacattaat tttttagaaa tgtctcaagt aatgcaacat tgttactgtc tttcttctga
      181 aaaatttact attacagaat cattaattgc cggaaaagaa gaaacaacga ttattttttg
      241 caaatacaga cgttcagaag aggcattgca gcaagcattt ccaaatgtaa aaattactac
      301 ttttgccaaa tcttcttacg gactcaattt gcaattttat aatcaaatta tttattttga
      361 taaaacgttt gattattctc agcgtgatca atcagaaagg cggatttaca gaactgggca
      421 aacacaagac tgctactatc atgatttaag cggtaatgtc ggtctggatt ctcttattga
      481 tacaaatatt tctaagaaaa caagcttatt gcaagaattt aaaaaagaac tatcacaaaa
      541 aaattctttt gaggtgataa tggatgcttt ctagaacagt ctttgatgct tcccaagaaa
      601 gaatggaagc gattttttct gaattcgata atattattgt gtcgttttcg ggtggtaaag
      661 atagcgcagt aatgctccat ctcatgattg actacatgcg gaaaaataat attcgcaaga
      721 aaatatatgt atatcattta gattatgaag gtcaatacag cgctacaact gattttgtta
      781 ctgaaatgct tacaactaat ttagatatca tcgaaccact ttggtgttgt cttcccatcg
      841 cggcacaatc agctgtttcg atgttcaccg accactggaa accgtgggaa aagaccaagc
      901 aaaacatctg ggttagagat atgcccacct ttccacacgt gattaatgaa gacaatgccc
      961 cgtttgactt tgattttgaa aacctttggg attatgaatt taataaaaaa ataattaact
     1021 ggttacatac taaaaataac gcccaaaaaa ccattgcttt gattggtata agacaacaag
     1081 aatctcttaa tcgctataac gcaattcata aaaaagaacg aatgtataaa acatacaatt
     1141 ggacgaccga aatttccaaa aacatttaca acgcctatcc aattcacgat tggcaagtag
     1201 aagatatatg ggtcgcaaat gcaaagttca attggtctta taataaaatt tatgatttat
     1261 tttatcatgc tggcctaact gtgcacgaga tgcgtgtcgc cagtcctttt aacgatgctg
     1321 ctacagaaag tcttaaactg tacagggtca tcgaacctgc gctttggtcc aaattagtcg
     1381 gccgggtgaa tggcgccaat ttcactgcca tatacggtgg cacttccgca atggcttgga
     1441 aagaaattaa actacctaaa aatcatactt ggaaatcata tttggaattt ttactcacaa
     1501 ctttaccaag ttacactaga gaacgctatt taaaaaaatt caaaacaagt attacctatt
     1561 ggaccgaaaa aggtggtgct ttaaaagtag aaattgtaga agaattaaaa aatttagata
     1621 tacaagcaga cttcctaggt aaaccacaaa ataaccgagt atatactaat ccaatggaaa
     1681 tcgttcgttt taaggagtat ccagacgatt tgaaaatcaa agaattcgca agcgttccta
     1741 cctacaaacg catgtgcata gcaatattga agaatgatta tacctgcaaa tatatgggat
     1801 tcggccaaac aaaattggaa ttagaaaaaa gaaaaaacgc attagagaaa tataataata
     1861 ttttatgagg tgaactaatg aattacaaga gcccagtata tagcgttact cccattcact
     1921 acacaaaatt acaagcaaat aattataatc ccaacactgt ccccgcaacc gaactcaaac
     1981 tacttgaaaa atcaatttgg gaagatgggt ttacgcaacc aattgtttgt tatcccttgg
     2041 aagacagcga taaatatgaa ataatagatg ggttccaccg ttacactatc atgagaacct
     2101 ctaaacgaat tcgagaacga gaaaatgaat tcttaccagt agtcatctta gaaaaggaca
     2161 ccgtgaatcg aatggcctct acaatacgtc ataatcgtgc gcgcggattt cataatgtcg
     2221 aattaatgtc caacattgtt agtgaacttg tagatagcgg gatgtccgat agttggatta
     2281 tgaaaaatat tggaatggat gctaatgaaa tcttacgctt aaaacaagtg agcggacttg
     2341 ctcacctctt cttagataaa gaattcagtc acacatctga ttaattgatg aaaagaggtt
     2401 taataatgaa agaaaataaa tacgatgaca aacatttttt cgaacaatat agccaaatgc
     2461 ctcgctcgaa agaaggatta aaagcagctg gtgaatggca tgaacttaaa aaaatgcttc
     2521 ctgattttaa ccagaaaaca gtccttgatt tagggtgtgg ctttggatgg cactgtatct
     2581 atgcagctga acatggtgca aaaaaagtac ttggtatcga tttatccgaa agaatgctta
     2641 ctgaggctaa acgaaaaact acatcgccag tggtttgtta cgagcaaaaa gccatagaag
     2701 atatagctat tgaaccagat gcatacaatg ttgttctgag ttcccttgca cttcattaca
     2761 ttgcttcttt tgacgacatt tgtaagaaag tctatattaa cctaaaatct agtgggtctt
     2821 tcattttctc tgtagaacat ccggtattta cggcagatgg aagacaagat tggtatacgg
     2881 atgaaacagg taacaaatta cattggcccg ttgaccgata ttttaatgaa tctatgcgaa
     2941 caagccattt tcttggagaa gatgtccaaa agtatcaccg aacagttact acttacatcc
     3001 aaacattact gaaaaatggc tttcaaatta atagtgttat cgaaccggaa ccagctcctg
     3061 aattaaaaga tttacccgaa atgcaagacg aataccgccg cccaatgatg ctactcattt
     3121 cagcaacgaa acaataataa aaaacccctt ctaaatcaat agaaggggtt tactttgtta
     3181 aaatattatt tcttagtttt ctttggtttt tctttttctt gctgtttgtt catcgcactc
     3241 atcatttgat tgattttctt ttgtgatggt ttttgaccca tttgtgccat catcatttgt
     3301 aacatttgtt cgttaattgg cggattgttt tttaaatagc tcatcatgta acgtcttgca
     3361 ataaagaatc ctcccgcaag accagctagt aaacaaataa tgccgacaag aatgtaaatc
     3421 cacatagtct cttttctcct ccttgaaaca aaatcctctt ttattgtact tgatttatat
     3481 taaacagaca atacttttca agaaaactta tcatctagat caatttatca ataaaagctg
     3541 caaacaacct cgtaattata ccattaatgg tactacggcg caatctaaaa aaagcataaa
     3601 aaaacagacc gctctagaaa aattagcaac ggtctgattg tttaattaaa gtgattttac
     3661 tgtattaact acgttttcaa cagtaaagcc gtaattctta ataactgttt cacctggagc
     3721 agaagcacca aatttgtcaa ttccgataac tttaccatct aaaccaacat aacgttccca
     3781 tccaaagcta gcgcccatct ctactgctac acgttttcta acagcattcg gtaatacact
     3841 ttctttgtac tcagcagatt gttgctcgaa tagatcaaat gatggcacac tgacaactga
     3901 tacatctgtt ccttgagctt gaagttcttt ttgcgcttca atagctaagt taacttcaga
     3961 accactcgct aggatgattg cttctggcac gtcaccttta gctggggaaa taacataagc
     4021 acctttttta acgccttctg cagttaattt agcagaattt ggtagtgttg gtaggccttg
     4081 acgagtaaga acaagtacat gcggtgtaga tgtagaagtg atagcaagtt tccaagcctc
     4141 cacaacttca tttccatcag caggacgaat aacagaaagc cctggcattg cacgtaagct
     4201 tgcaagttgt tcgattggct catgtgttgg gccatcttcc ccaactgcaa tactatcatg
     4261 cgtcattaca taggttactg gtaaatgttg aatagctgat aaacgaatag cagcacgtac
     4321 atagtcagag aatacgaaga atgtaccacc gtatacttgt aatccgccgt gaagtgccat
     4381 accatttaat gcagcgccca tcgcaaattc acgaacacca aaccaaatgt ttctttcagc
     4441 tggagtcgct tttgtaaatt caccgtctgt tttaattgtt gtattattcg aacctgcaag
     4501 gtcagcagat ccgccaaaaa tagttgggat ttttccagct aacgcattga taacttctcc
     4561 actggaagca cggctagcaa gtgcttttga atcatcatat actggaagat cctcatccca
     4621 atcagctggt aacttgttgt tcaagctatc ttctaattgt ttcgcaagct ctggatattc
     4681 tgctttatag gaagcaaata actcattcca agctgtttct gctttttcac cacgttcgcc
     4741 aattgtttct ttaaagcgag cagtaacttc ttcaggaaca aagaatttct cttcgtagtt
     4801 ccaaccataa gcttttttcg cttctaaaat accttcatcg cctagtggag caccgtgaac
     4861 tttacttgta ccggcatttg gagcaccaaa accgataaca gttttcactt caatcatagt
     4921 aggttgagaa gtgttttgtt tcgctttttc gattgctgct aaaatttcag ctgtatcatt
     4981 accgtctttt actaataaat gttcccagcc ataagcttca aagcgttgtt ttacattttc
     5041 agagaaagat ttgtctaaat caccatcaag agagatatca ttggaatcat agagaacaac
     5101 taatcttcct aattgttgat gacctgcata agaagccgct tctgaagcaa caccttccat
     5161 taagtcacca tctccgcata gtgcataagt ataatgatcc actaccggga aaccatcttt
     5221 attatatttc gcttctaaat gtctttctgc catagccata ccaacagcca tcgcaatacc
     5281 ttgaccaagt ggaccagtag ttgcgtctac accatctgta taacgatatt ctgggtgacc
     5341 aggagtttta ctttcccatt gacggaaatt tttaagatct tctaattcta atttgaatcc
     5401 acttaagtgt aataaactat ataaaagcat tgagccgtgt ccagcagaaa gtacaaaacg
     5461 atctcggtta aaccaatgtg aattcttagg gttagtattt aatacacgcg accaaagtgc
     5521 gtaggccatt ggtgctgctc ccattggtaa tcctggatga ccagaatttg ctttttgaat
     5581 tgcgtccatt gataatgtac gaattgtatt cactgctaaa ctatctgtgt tatcgaacaa
     5641 atgaaacatc ctctcttcaa tataatttta actactttta ataataagcc taaaaagcaa
     5701 ttaacacaac taataattgc tttaaattgc ttaattgatt ggtatttttg ttcatttgct
     5761 cattaatgtt tatttggtac taattattag tgcttatttt ttctaagttg tttcacttta
     5821 tgcggcgtta catcttttcc atttgggtcg attatcgttg tattttctat tgtccccttc
     5881 atatgcgtac gaaaagactt gatgtattct tttcttaaat tatcttgctc cactttttct
     5941 gtagcagtta atgttccggc ttttttcttt ttagaaagct cattaatacg atcta
//
LOCUS       DASDYO010000151         5909 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.151, whole genome shotgun sequence.
ACCESSION   DASDYO010000151 DASDYO010000000
VERSION     DASDYO010000151.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5909)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5909)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5909
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.151"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..272)
                     /locus_tag="U0290_002682"
     CDS             complement(<1..272)
                     /locus_tag="U0290_002682"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465987.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302711.1"
                     /translation="MEKKRTRAEELGITRRKILNTARDLFMEKGYRAVSTREIAKIAN
                     ITQPALYHHFEDKESLYIEVVRELTQNIQVEMHPIMQVTKAKEEQL"
     gene            complement(289..687)
                     /locus_tag="U0290_002683"
     CDS             complement(289..687)
                     /locus_tag="U0290_002683"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302712.1"
                     /translation="MAASLKDRLEKEVRTYSADNNLTVQTIDFLYAGPHMRGRHSLIL
                     AFTEAGIFTFVFKLSDAEMHFLDGETVQQIALEKKKLVYRLYIRAVTEEGELEEGKYL
                     VSKRVLGRKWHKETLEKLINKNLPLLTATK"
     gene            920..1255
                     /locus_tag="U0290_002684"
     CDS             920..1255
                     /locus_tag="U0290_002684"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003739727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302713.1"
                     /translation="MGELGNIETRNGRTSFFDGGLLQYIGWTILGTLVTICTIGICYP
                     WALCMVYGWKINHTVIEGRRLKFQGSAVGLFGHWIKWLFLTIITIGIYGFWVFIKLED
                     WKVKNTIFK"
     gene            complement(1312..1383)
                     /locus_tag="U0290_002685"
     tRNA            complement(1312..1383)
                     /locus_tag="U0290_002685"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1348..1350),aa:Arg,seq:ccg)
     gene            complement(1503..2939)
                     /locus_tag="U0290_002686"
     CDS             complement(1503..2939)
                     /locus_tag="U0290_002686"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lytic polysaccharide monooxygenase"
                     /protein_id="HEM2302714.1"
                     /translation="MKKMTKIGMFFAVFTLAVVLFQTTASAHGYISKPASRVYLANKG
                     INVGVGSAQYEPQSVEAPKGFPASGPADGSIAGGGKYSLLDAQTANRWAKVDIQSGPL
                     TVEWTLTAPHRTSSWQYFITKKGWDPNKPLTRASLEPLTTIEADGSVPNALTKQEINI
                     PDDRSGYYVILGVWNIADTGNAFYQVIDANIINSSVAPAVDNEAPTEPTNLAATTTAK
                     NVSLTWTVSTDNVGIKGYEILRDGVVLGESQTASYEDTAVESNTAYTYTVRAKDFAGN
                     KSTLSDSIDVTTKEAPAVDNEAPTAPKSLMSHGQTETTIALCWQASTDNVEVKNYEIY
                     RNNTKIATSTKTMFEDTKLASNKSYNYKVYAVDTSGNRSLVSNEITIKTKPLDPLNTW
                     KSDQIYHAGDQVYYNGVAYTAKWWTKGNTPDTSDVWQTASRDIQIWNAQKAYNGGDKV
                     TYNGKTYQAKWWVRGEKPDSSSIWTLLN"
     gene            3096..3692
                     /gene="clpP"
                     /locus_tag="U0290_002687"
     CDS             3096..3692
                     /gene="clpP"
                     /locus_tag="U0290_002687"
                     /EC_number="3.4.21.92"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-dependent Clp endopeptidase proteolytic
                     subunit ClpP"
                     /protein_id="HEM2302715.1"
                     /translation="MNLIPTVIEQTSRGERAYDIYSRLLKDRIIMLGSAIDDNVANSI
                     VSQLLFLDAQDPEKDIFLYINSPGGSISAGMAIYDTMNFVKADVQTIGMGMAASMGSF
                     LLTAGANGKRFALPNAEIMIHQPLGGAQGQATEIEIAARHILKIKERMNTIMAEKTGQ
                     PYEVIARDTDRDNFMTAQEAKDYGLIDDIIINKSGLKG"
     gene            complement(3741..5132)
                     /locus_tag="U0290_002688"
     CDS             complement(3741..5132)
                     /locus_tag="U0290_002688"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="amino acid permease"
                     /protein_id="HEM2302716.1"
                     /translation="MTKVNSFFRKKSFHNPATDKHHLNKTLGAFDLTMLGVGAVVGGG
                     IFILPGQVASVIAGPGIIISFIIAGIACCLAALCYSEFASKLPVAGSAYTYSYHVFGE
                     GVAWILGWSLILEYGLAVAAIASGWSSYMKSLLAGFDLHIPTVISSAYDPSAGTYFDL
                     LAFVVVMVIGILLSFGIRESTRVNNIMVLVKIAVVVLFILVGAFYVKPDNWTPFLPFG
                     VQGVITGASTVFFAYIGFDAVSSAAEEVKNPQKNMPIGIISSLAICTLLYILLSAVLT
                     GVVPYTDLVDVSAPVAFALQAINQNWIAGLLSVGAIVGMTTVVLVMSYGGTRLLFAMG
                     RDGLLPKSFSKISKNDTPVRNTMIFATVMGLIASTVPMADLAQLINIGTLFAFAMVSI
                     GIFFLRRNPDLNQKGFRTPFYPVVPALSFLLCVYLMINLSKTTWIAFGIWFVIGILVY
                     TFYGRKHSALRVK"
     gene            5349..>5909
                     /locus_tag="U0290_002689"
     CDS             5349..>5909
                     /locus_tag="U0290_002689"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="internalin N-terminal domain-containing protein"
                     /protein_id="HEM2302717.1"
                     /translation="MRKVFMFLSTALLLAILSLSFTGLDLKAKAASDLYPLPAPIIDV
                     FPDDGLAKDMARNLNKDSVNDVIDQDDLDALTSLGFETHTITNDSMQLLERAMFNNVT
                     DVSIMEFGAKLTEFPDITTIPHLKTLFFADSPGRLTRNLSLPNYQNYPEMDTITMSGN
                     NLVGSIPDFTGMPALKQLYMSDMSITS"
BASE COUNT         1795 a         1169 c         1016 g         1929 t
ORIGIN      
        1 tgtaattgtt cttcttttgc tttggtcact tgcataattg gatgcatttc cacttggata
       61 ttttgcgtca attcacgaac cacttcaata tatagggatt ctttatcttc aaagtggtga
      121 tatagtgccg gttgggtaat gttggcaatt ttagctattt ctcttgttga aactgcccgg
      181 taaccctttt ccataaataa atcacgtgct gtattcaaaa tttttcttct agttattcct
      241 aattcttctg cccgagtccg cttcttttcc atcatcaccc cacctttctt attttgttgc
      301 agttagtaat ggaaggtttt tattaatgag cttttctagt gtttctttat gccatttacg
      361 acctagaaca cgcttactaa caagatattt tccttcctcc agctcgcctt cttcggtcac
      421 tgcacgaata tataaccgat aaactaattt ctttttctca agcgcaattt gctgaaccgt
      481 ttccccatcc aaaaagtgca tttccgcatc acttaattta aatacaaatg taaaaattcc
      541 cgcttccgtg aacgcgagaa taagcgaatg tctccctcgc atatggggcc ctgcatataa
      601 aaaatcaatc gtttgaacgg tcaaattatt gtcagcacta tatgttctta cttctttttc
      661 taatcggtct ttcaaactag cagccaaaat aagcgcctcc cttgctgatt tatattttac
      721 cagaaaatgg cgggttgaag tagggaaagt tttttgatac ttaaaaagga ttaaattatt
      781 tcccttcata attcataaaa aagtcaaatc aagtattctc ttcttgattc attcatgtta
      841 atatcaatat tagtgtttat taagcgggta taaacgttct aacgattata taaataataa
      901 agggaagttg gtttgcaaaa tgggagaatt aggtaatatc gaaacacgaa acgggagaac
      961 atcatttttt gacggaggtt tactgcaata tattggttgg acaattcttg gcactttggt
     1021 gacgatttgt acgattggta tttgctatcc atgggcttta tgtatggttt atggctggaa
     1081 aatcaatcat acagttattg aaggaagacg cttgaaattc caaggttctg cggttggact
     1141 ttttggtcac tggattaaat ggctcttcct aacaatcatt actatcggaa tttatggttt
     1201 ctgggttttc attaaactag aagattggaa agtaaaaaat acgattttta aataaaatga
     1261 aaaaacatct tacaacatgg cttttgccag atgtgggatg tttttttagt atgccctcgg
     1321 agggaatcga acccccattt taagaaccgg aatcttacgt gctatccgtt gcaccacgag
     1381 ggctatatgt aggccagaaa tgcttaccgt acgaataata attatagcga aattcgtagt
     1441 gttttacaag ttttatttta aatgaagaag ccagcgcctc caaagatttg ctggctcaag
     1501 tattaattta ataatgtcca aattgatgaa ctgtcaggct tctcgcctcg tacccaccat
     1561 ttcgcttggt atgtttttcc gttatacgta actttatctc cgccattata ggctttttga
     1621 gcattccaga tttggatatc tctacttgct gtttgccaaa catcacttgt atctggagtg
     1681 ttcccttttg tccaccattt cgctgtataa gctactccgt tatagtaaac ttggtcacct
     1741 gcatggtaaa tttggtccga tttccaggtg ttcagtggat ctagcggttt tgttttaata
     1801 gtgatttcat tacttactaa tgaacgattg ccagatgtat ctactgcata cactttataa
     1861 ttatagcttt tattgctggc taattttgta tcttcaaaca tggttttcgt ggatgttgca
     1921 atttttgtat tgttacgata aatttcataa tttttcactt ctacattatc tgtggaggct
     1981 tgccaacaaa gagcaatagt tgtctccgtt tgtccatgag acattaaact ttttggtgca
     2041 gttggtgctt cattatctac tgctggggct tcttttgtcg tcacatcaat actgtcgctt
     2101 aatgtagatt tgtttccggc gaaatctttt gctcgaacag tgtaagtgta tgcggtattt
     2161 gattctacag ctgtatcctc ataagaagct gtttgacttt ctccgagtac tacgccatca
     2221 cgtaaaattt cataaccttt tattcctacg ttatcggtag aaacagtcca ggtcaaactt
     2281 acattcttag cggtagtagt tgctgctaaa ttagtcggtt ctgtcggcgc ttcgttgtca
     2341 acagctggtg ctacactaga attaataatg tttgcatcaa ttacttgata gaatgcattt
     2401 cctgtatcag caatgttcca aacgcccaaa ataacgtagt atcctgaacg atcatctgga
     2461 atattaattt cttgttttgt taaagcattt ggtacgcttc catccgcttc aatcgttgtg
     2521 agtggctcta atgatgctct agttaacggt ttatttgggt cccaaccctt tttagtaata
     2581 aaatattgcc agctgcttgt tctgtgtggc gcagttaatg tccattctac agttaatggg
     2641 cctgattgta tatctacttt tgcccaacgg tttgcagttt gagcgtctaa cagtgaatat
     2701 ttcccaccgc ccgcaatact cccgtcagca ggtccgcttg ctggaaatcc ttttggagcc
     2761 tccacacttt gtggttcata ttgtgctgat ccaaccccaa cattaatccc tttgttggct
     2821 aaatatacac gacttgctgg ttttgatatg tatccatgag ctgaagcagt tgtttgaaaa
     2881 agaactacag ctaacgtaaa caccgcaaaa aacattccaa tcttcgtcat tttcttcatg
     2941 atgcaccttc ctttcagcat agttcattat acctttttgt taaattttat agaaataatt
     3001 cgcctcagac tttatcgttt gacctagttt gaccattcgt gtatgatata aacaaagcta
     3061 atttaaaatt cacatttaac aggaggaatc ttgatatgaa cttaattcca acagtaatcg
     3121 aacaaactag ccgcggtgaa cgtgcatacg acatttattc ccgtttatta aaagacagaa
     3181 ttattatgtt aggatctgca attgatgata acgtggcgaa ttcgatcgtt tctcaattac
     3241 tcttcttaga tgcacaagat cctgaaaaag atattttcct atatatcaat tcaccaggtg
     3301 gaagtatttc agctggtatg gccatttacg atacaatgaa tttcgttaaa gcggacgtac
     3361 aaactatcgg catgggtatg gcagcttcca tgggctcatt cttactaaca gctggtgcaa
     3421 atggcaaacg gtttgccttg ccaaacgctg aaattatgat tcaccaacca cttggtggcg
     3481 ctcaaggtca agcgactgaa atcgaaatcg ctgctcgcca cattttaaaa atcaaagaac
     3541 gtatgaatac gattatggct gagaaaactg gtcaaccgta tgaagtcatt gctcgtgata
     3601 cagatcgtga taatttcatg actgcacaag aagcaaaaga ttacggctta attgatgata
     3661 tcatcattaa caaatctggc ttaaaaggct aataaaaaaa agaggttttg cacaaaatgc
     3721 aaaacctctt tttttatact ttattttaca cgaagcgctg aatgttttct tccgtagaat
     3781 gtatacacta gtattcctat cacaaaccaa ataccgaatg caatccatgt tgttttagat
     3841 aagttaatca ttaaatatac acaaagcaaa aaggaaagtg ctggtactac tggataaaat
     3901 ggcgttctaa atcctttttg attcaagtct ggatttctcc gtaaaaagaa aatcccaata
     3961 gaaaccatcg caaaagcaaa caacgtacca atattaatta attgtgctaa atctgccatc
     4021 ggtacagtag aagcaattag tcccattact gtcgcaaaaa tcatcgtatt tctcacaggt
     4081 gtatcatttt tgcttatttt tgagaacgat tttggtaata atccgtcacg tcccattgca
     4141 aataacaagc gtgtaccacc ataagacata acaagtacaa ccgttgtcat cccaacaatc
     4201 gcaccaactg acaacaagcc cgcaatccag ttttgattaa tagcttgaag cgcgaaagca
     4261 actggtgcac taacatcaac taaatccgta taaggaacaa cccctgtaag tactgcagaa
     4321 agtaaaatat aaagtagtgt acagattgcc agtgaagaaa taattcctat tggcatattt
     4381 ttttgtggat ttttcacttc ttccgcggca cttgatacag catcaaagcc gatataagca
     4441 aagaaaactg tggaagctcc tgtaatgact ccttgtacac caaacggcaa gaacggcgtc
     4501 caattatcag gtttcacata gaaagctcct actaaaataa ataatacaac cactgcaatt
     4561 tttactaaca ccataatatt attcactcgt gtggattcac gaataccaaa actaagtaaa
     4621 ataccaatta ccataactac tacaaatgca agtaaatcaa aataggttcc ggcactcggg
     4681 tcataagctg aagaaatcac cgttggaata tgtaagtcaa atcctgctag tagactcttc
     4741 atataagaag accaaccact tgcgattgca gcaacagcca gaccatattc taaaatcagt
     4801 gaccacccta aaatccatgc aacaccttcc ccgaacacat ggtaactgta agtatatgcg
     4861 ctacctgcga ctggtaattt agaagcaaat tccgaataac ataatgccgc caaacagcaa
     4921 gcaattcccg caataataaa agaaataata attcctggtc ccgcaatgac agaagctacc
     4981 tgccctggaa gaataaatat ccctccccca acaaccgctc cgactccaag catcgttaaa
     5041 tcaaacgctc ctaacgtttt gttcagatga tgtttatctg tcgctgggtt atgaaaactc
     5101 ttttttctga aaaaagaatt aactttcgtc ataaaaattc ctccttctta aattccaatt
     5161 ttcagttaat ttatatgtgt atttttaaac taacttgaaa actattattc atagtaccat
     5221 aaatagattg aaaaatatac aacatttgta gattttcgta caaaaaatgt tcatatatgg
     5281 tgtaaatatt ttttcttggt tttttcgtgt tatcctttag acctctaaaa aagaaaggac
     5341 tgaatacatt gagaaaagtt ttcatgtttt taagcacagc tttattatta gccattttgt
     5401 cactaagctt tactggttta gatctgaagg caaaagctgc ttctgattta tatccactac
     5461 ccgctccaat tattgatgtt ttcccagatg atggattagc caaagatatg gctagaaact
     5521 taaacaaaga ctctgtgaat gatgttattg atcaagatga tttggatgca ttaactagtt
     5581 tagggtttga aacacatacg attacgaatg attccatgca attactagag cgtgccatgt
     5641 ttaacaatgt cacagatgta agtattatgg aatttggggc taaattaacg gagttccctg
     5701 atattactac aattccacat ttaaaaacgt tattttttgc tgattcacct ggaagattaa
     5761 ctagaaactt atcccttcca aactaccaaa attatcctga aatggatacc attacaatga
     5821 gcggaaataa tttagtcggc tctatccctg actttaccgg gatgcctgct ttaaaacagc
     5881 tttatatgtc tgatatgtca attacaagc
//
LOCUS       DASDYO010000152         5889 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.152, whole genome shotgun sequence.
ACCESSION   DASDYO010000152 DASDYO010000000
VERSION     DASDYO010000152.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5889)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5889)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5889
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.152"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            924..3317
                     /gene="inlA"
                     /locus_tag="U0290_002690"
     CDS             924..3317
                     /gene="inlA"
                     /locus_tag="U0290_002690"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463962.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class 1 internalin InlA"
                     /protein_id="HEM2302718.1"
                     /translation="MRRKRYVWLKSILVAILVFGSGVWINTSNGTNAQAATITQDTPI
                     NQIFTDTALAEKMKTVLGKTNVTDTVSQTDLDQVTTLQADRLGIKSIDGLEYLNNLTQ
                     INFSNNQLTDITPLKDLTKLVDILMNNNQIADITPLANLTNLTGLTLFNNQITDIDPL
                     KNLTNLNRLELSSNTISDISALSGLTSLQQLSFGNQVTDLKPLANLTTLERLDISSNK
                     VSDISVLAKLTNLESLIATNNQISDITPLGILTNLDELSLNGNQLKDIGTLASLTNLT
                     DLDLANNQISNLAPLSGLTKLTELKLGANQISNISPLAGLTALTNLELNENQLEDISP
                     ISNLKNLTYLTLYFNNISDISPVSSLTKLQRLFFYNNKVSDVSSLANLTNINWLSAGH
                     NQISDLTPLANLTRITQLGLNDQEWTNPPVNYKVNVSIPNTVKNVTGALIAPATISDG
                     GSYAEPDITWNLPSYTNEVSYTFNQSVTIGKGTTTFSGTVTQPLKAIFNAKFHVDGKE
                     TTKEVEAGNLLTEPAKPVKEGYTFIGWFDAQTGGTNWNFSTDKMPTNDIDLYAQFSIN
                     SYTATLDNDGVTTSQTVDYQGLLQEPTAPTKEGYTFKGWYDAKTGGDKWDFATSKMPA
                     KNITLYAQYSANSYTATFDVDGKTTTQAVDYQGLLKEPKTPTKAGYAFKGWYDEKTDG
                     KKWDFATDKMPANDITLYAQFTKNPVAPPTTGGNTPPTTNNGGNTTPPSANIPGSNTS
                     TGNSASTTSTMNAYDPYNSKEASLPTTGDSYNALYLLIGLLAVGTAVALTKKARASK"
     gene            3402..5294
                     /locus_tag="U0290_002691"
     CDS             3402..5294
                     /locus_tag="U0290_002691"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463963.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2302719.1"
                     /translation="MKEKHNPRRKYCLISGLAIIFSLWIIIGNGAKVQAETITVSTPI
                     KQIFPDDAFAETIKDNLKKKSVTDLVTQNELNSIDQIIANNSDIKSVQGIQYLPNVTK
                     LFLNGNKLTDIKPLANLKNLGWLFLDENKIKDLSSIKDLKKLKSLSLEHNGISDINGL
                     VHLPQLESLYLGNNKLTDITILSRLTKLDTLSLEDNEISDIVPLSGLTKLQNLYLSKN
                     HISDLRALAGLKNLDVLELFSQECLNKSINHQTNLVVPNTVKNIDGSLVTPEIISDDG
                     DYEKPNVKWHLPEFINEVSFIFYQPVTVGKAKARFHGRVTQPLKEVYTVSYDVDGTVI
                     KTKVEAGTRITAPKPPTKQGYVFKGWYTEKNGGHEWNFSTDYMSGNDFTLYAMFKAET
                     TEKAVNLTRYVKYIRGNAGIYKLPREDNSLKQGTLASHRCKALTVDREARNGGELWYR
                     LKNIGWTKAENLSLDRYDKIEYDKGVTAYARVKNAPGNAVWTKPYNTAGATLVNKLSV
                     YQGKNMRILREAKTPITTWYQFSIDGKVIGWVDTRALNTFYKQSMEIPIQLTRYVSAN
                     KGNEAYYKVPVVDSPIKWGTLAKYKNQTLIVDRTATVEGQLWYRIRTSSTFIGWTKAA
                     NLRAQK"
     gene            complement(5409..5876)
                     /locus_tag="U0290_002692"
     CDS             complement(5409..5876)
                     /locus_tag="U0290_002692"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958737.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rrf2 family transcriptional regulator"
                     /protein_id="HEM2302720.1"
                     /translation="MKYSIQFSDAIHILAYIEIFKNTNLLSSEIIAGSVKTNPANIRK
                     IMSNLKKSNLITTQTGKANPILARPPEEISLLDVYKSIEGNTNLIHVDPKTNPDCIVG
                     ANIQQVLASKYDLLQQKIEFEMEKIKLDSIVRDISVLESKDRPQNMEIIEKYL"
BASE COUNT         2132 a          971 c         1126 g         1660 t
ORIGIN      
        1 tgtgctgttg tcctatgtac tttttcagtt ggaatgtatg cttatctcgg ggtttatgtc
       61 ggattgttgg gctaagggtt ttgtgaaaaa gaggcggtaa gaactaataa tttaattaca
      121 tatccgatta ttgtagtggc ttaagacttt caaaaaaaga gagatgataa aaactatgag
      181 taatgtgctg gtgagaaaag accttcgttt gaaaatagaa gaatcagttc agctagaatt
      241 aaaacggctt ttaaagatta tgccaagtgg ttacggaagg aatatgattt tcctattcgt
      301 gatataaaaa ttaaactcga agaaatcaat tctcagttca gaaacaaaaa gaactatcaa
      361 ccagcaacgc atacaaagta aaaagataac acaatcacac cgtgttatct ttttttgtat
      421 acatttcacc aaaaatctcg acatccttat gtgttatttt gaacataaag ggtagaggat
      481 aacataagtt aattcttttt tggagaaaaa tagctattat tatttaatgg gctttgaaag
      541 gggtgattat atagaagaag tgaaaaaaag agagttttgg cgggaagagt gcggggcttg
      601 agttcgtcaa taatagacca ttttaaaagg tggaatgaca cgtgtggtat caacataaca
      661 tgatttgcat ggttgaattc ctattaagct tcgatagtga aatacataaa aatattatat
      721 atagggaaaa tgtgctggaa cgaacgagat gaaagatatc actaagcagc tccgtagaca
      781 gattaactac tgaataccat aggaacaatt catggggcgc atagtttaat aaagtaagca
      841 gacatgattt ttcggatgca ggagaaaatc ctatacaacg aaacctgata ttgtttctaa
      901 ctattgaaaa aggagtgtat atagtgagaa gaaaacgata tgtatggttg aaaagtatac
      961 tagtagcaat attagtattt ggcagtggag tatggattaa cacgagtaac gggacaaatg
     1021 ctcaggcagc tacaattaca caagatactc ctattaatca gatttttaca gatacagctc
     1081 tagcggaaaa aatgaagacg gtcttaggaa aaacgaatgt aacagacacg gtctcgcaaa
     1141 cagatctaga ccaagttacg acgcttcagg cggatagatt agggataaaa tctatcgatg
     1201 gattggaata cttgaacaat ttaacacaaa taaatttcag caataatcaa cttacggata
     1261 taacgccact taaagattta actaagttag ttgatatttt gatgaataat aatcaaatag
     1321 cagatataac tccgctagct aatttgacga atctaactgg tttgactttg ttcaacaatc
     1381 agataacgga tatagacccg cttaaaaacc taacaaattt aaatcggcta gaactatcta
     1441 gtaacacgat tagtgatatt agtgcgcttt caggtttaac tagtctacag caattatctt
     1501 ttggtaatca agtgacagat ttaaaaccat tagctaattt aacaacacta gaacgactag
     1561 atatttcaag taataaggtg tcggatatta gtgttctggc taaattaacc aatttagaaa
     1621 gtcttatcgc tactaacaac caaataagtg atataactcc acttgggatt ttaacaaatt
     1681 tggacgaatt atccttaaat ggtaaccagt taaaagatat aggcacattg gcgagtttaa
     1741 caaaccttac agatttagat ttagcaaata accaaattag taatctagca ccactgtcgg
     1801 gtctaacaaa actaactgag ttaaaactgg gagctaacca aataagtaac atcagtcccc
     1861 tagctggtct aaccgccctc actaacttag agctaaatga aaatcagtta gaagatatta
     1921 gcccaatttc taacttgaaa aatctcacat atttaacgtt gtactttaat aatataagtg
     1981 atataagccc agtttctagt ttaacaaagc ttcaaagatt atttttctat aataacaagg
     2041 taagtgacgt aagctcgctt gcgaatttaa ccaatattaa ttggctttcg gctgggcata
     2101 accaaattag cgatcttaca ccattggcta atttaacaag aattacccaa ttaggattga
     2161 atgaccaaga atggacaaat ccaccagtga actacaaagt aaatgtatcc attcccaaca
     2221 cggtgaaaaa tgtgacgggc gctttgattg caccagctac tattagcgat ggcggtagtt
     2281 acgcagaacc tgatataaca tggaacttac ctagttatac caatgaagta agttatacct
     2341 ttaatcaatc tgtcaccatt ggaaaaggaa cgacaacatt tagcggaaca gtgacgcagc
     2401 cacttaaggc aatttttaat gctaagtttc atgtggacgg caaagaaaca acaaaagaag
     2461 tggaagctgg gaatttattg actgaaccag ctaagcctgt aaaagaaggt tacacattta
     2521 ttgggtggtt tgatgcccaa accggcggaa ctaactggaa tttcagtacg gataaaatgc
     2581 cgacaaatga catcgattta tatgcgcaat ttagtattaa cagctacaca gcaaccttgg
     2641 ataatgacgg tgtaacaaca tctcaaacag tagattatca aggcttgcta caagaaccta
     2701 cggcaccaac aaaagaaggt tatactttta aaggctggta tgacgcaaaa actggcggtg
     2761 acaagtggga ttttgcaact agtaagatgc ctgctaaaaa catcacctta tatgctcaat
     2821 atagcgccaa tagctataca gcaacctttg atgttgatgg aaaaacaacg actcaagcag
     2881 tagactatca aggacttcta aaagaaccaa aaacgccaac aaaagccgga tatgctttca
     2941 aaggttggta tgacgaaaaa acagatggta aaaaatggga ttttgcgaca gataaaatgc
     3001 cagcaaacga tattacgctg tacgctcaat tcacgaaaaa tcctgtggca ccaccaacaa
     3061 ctggagggaa cactccgccg actacaaata acggagggaa cactacacca ccttccgcaa
     3121 atatacctgg aagcaacaca tcaactggga attcagctag cacaacaagt acaatgaacg
     3181 cttatgaccc ttataattca aaagaagctt cactccctac aactggcgat agctataatg
     3241 cgctctacct gttgatagga ttgttagcag taggaactgc agtggctctt actaaaaaag
     3301 cacgtgctag taaatagaag tagtgtaaag agctagatgt ggttttcgga ctatatctag
     3361 cttttttatt ttttaataac tagaatcaag gagaggatag tgtgaaagaa aagcacaacc
     3421 caagaaggaa atattgttta atctcaggtt tagctattat ttttagttta tggataatta
     3481 ttggaaacgg agcgaaagta caagcggaga ctatcaccgt gtcaacgcca atcaagcaaa
     3541 tttttccaga tgatgctttt gcagaaacaa tcaaagacaa tttaaagaaa aaaagtgtga
     3601 cggatctagt gacacaaaat gaattaaata gtatagatca aatcattgcg aataatagtg
     3661 atattaaatc cgttcaagga attcagtatt tacccaatgt gacaaagtta tttttaaacg
     3721 ggaataaact aacagatata aagcccttag caaacttgaa aaatttagga tggctttttt
     3781 tagacgaaaa taaaattaaa gacctaagtt cgatcaagga cttaaaaaaa ttaaaatcac
     3841 tttctttgga gcataatggt ataagtgata taaatggact tgttcattta ccgcaactgg
     3901 aaagtttgta tttgggaaat aataaactaa cggatataac gattctttca cgtttaacta
     3961 aactggatac tttgtctctt gaagataacg aaattagtga tattgtgcca ctttcaggtt
     4021 taactaaatt acagaatcta tatttaagta agaatcatat aagcgattta agagcgttag
     4081 cagggcttaa aaatctggat gttttagaat tgtttagcca agaatgtttg aataaatcta
     4141 ttaatcatca aacgaatcta gttgttccga acacagtaaa aaacattgat gggtcgcttg
     4201 ttactccaga aataataagt gatgatggcg attatgaaaa accgaatgtc aaatggcatt
     4261 taccagaatt tataaatgaa gtaagtttta ttttctatca accagttact gttggaaaag
     4321 caaaagcacg atttcatggg agagtaaccc aaccactgaa agaggtttac acagtaagtt
     4381 atgatgttga tggaacggta ataaaaacaa aagtagaggc agggacgcga ataactgcac
     4441 ctaaacctcc gaccaaacaa ggctatgttt ttaaaggctg gtatactgaa aaaaatggtg
     4501 gacatgagtg gaattttagt acggattata tgtccggaaa cgattttact ttgtacgcga
     4561 tgtttaaagc ggaaacgact gaaaaagcag tgaatttaac acgctatgtt aaatatattc
     4621 gcgggaatgc ggggatctac aaacttccaa gagaagataa ctcgcttaaa caaggaacgc
     4681 tagcctcgca ccgctgtaaa gctttaactg ttgatagaga agcgcgaaat ggcggtgaat
     4741 tatggtacag gttaaaaaat attggctgga ccaaagctga aaatctttcc ttagaccgtt
     4801 acgataaaat agaatatgac aaaggtgtta ctgcttatgc aagagtaaaa aatgcgccag
     4861 ggaatgcagt ttggacgaaa ccatacaata cagctggcgc aaccctcgtg aacaagcttt
     4921 ccgtctacca aggtaaaaat atgcgaatat tgcgcgaagc caaaacacca attactacgt
     4981 ggtatcaatt tagcattgat ggtaaagtaa ttggttgggt cgatacgcgt gcacttaaca
     5041 cattttataa acaaagcatg gaaataccaa tccaattaac tcgatacgtc agcgcaaata
     5101 aaggaaatga agcatactat aaagttccgg tagtagatag cccaatcaaa tggggaactt
     5161 tagccaagta taaaaatcaa acattaattg tcgatcgaac agccaccgtt gaaggtcagc
     5221 tttggtatcg gataagaact agctccactt tcattggttg gacgaaagct gctaatttaa
     5281 gggcacagaa atgacctacg aaaagctatt tctaaatatt ggggaagaaa aaagctacaa
     5341 ctttaaattt atgaaaaaag aactgattcg ctgaaaacgg atcagttctt ttttctttgg
     5401 acttattttt acaaatactt ttcgataatt tccatattct gcggccggtc tttgctttca
     5461 agtacagaaa tatcacgaac aatactatct aatttaattt tttccatttc aaattctatt
     5521 ttttgttgga gcaaatcgta tttactcgca agaacttgtt ggatattggc tccgacaatg
     5581 cagtctggat tggtttttgg atcaacgtga attaaattcg tattgccttc tatactctta
     5641 taaacatcaa gcagtgaaat ttcttctggt ggtctagcaa gaatcggatt tgctttgcca
     5701 gtttgcgtag taattaaatt ggactttttc aaattactca tgatttttct aatgttagcg
     5761 ggatttgttt ttacgctacc agcaataatt tcactcgata acaaattcgt atttttaaaa
     5821 atttctatat aagccaaaat gtggatagca tcactaaatt ggatagagta tttcattttt
     5881 ttcaatcct
//
LOCUS       DASDYO010000153         5863 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.153, whole genome shotgun sequence.
ACCESSION   DASDYO010000153 DASDYO010000000
VERSION     DASDYO010000153.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5863)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5863)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5863
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.153"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(4..822)
                     /locus_tag="U0290_002693"
     CDS             complement(4..822)
                     /locus_tag="U0290_002693"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465911.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF1963 domain-containing protein"
                     /protein_id="HEM2302721.1"
                     /translation="MEQLFDILPSEWAERFLETEKERIELHFKDVGKLSLLQSKAGGR
                     GYLPREQGYPVTEEGKPLSLLTQINFSEMPQMENYPEFGLLAFYVDYQDDLYGLNFEN
                     PTSQEGFRVFFFDDLGSESLTAEEQDAFFEDVAKSDFYPVVNGEFKIAGQVSDQILLQ
                     DSFDFENEFGSNFYELADQIFAEDEDKSEALYQLGKECSQIGGYPFFTQEDPRMYTEN
                     PHHDTLLFQLASEDFDESRMAIMWGDCGVGNFFINKQDLINRDFSNIMYNWDCS"
     gene            complement(907..2118)
                     /locus_tag="U0290_002694"
     CDS             complement(907..2118)
                     /locus_tag="U0290_002694"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465912.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2302722.1"
                     /translation="MSKPKIVILGAGYGGLKTLRKLQQRNLEAEIVLVNKNDYHHETT
                     WLHEAAAGTIEPEKLMYPLDKVVNNTKTTFIQDTVVKINKDEKTVTLDANGDISYDYL
                     LIALGSEAETFGISGLKEYAFTITSVESVKKIRAHIEAQFAKWKTDPRDELLTIIVGG
                     AGFTGIEFLGELTNRIPELVKEYDVPREKVRIYCMEAAPKVLPQFDAKLVDYGVGVLE
                     DRGVEFHVGKPVKEATADGVKYAESENEVREIKAATIIWAAGVRGNSVIEASGFEAGR
                     GRVKVNNNLTVPGNEEILIVGDCSLIINPANDRPFPPTAQIAMQQADVAAVNLAKLVK
                     GETDLQDFVYHEKGTVCSLGDNDAIGVVFGKNLKGYPASVMKKVIDDRALLLIGGSGV
                     LASKGKFKFYK"
     gene            2568..3563
                     /locus_tag="U0290_002695"
     CDS             2568..3563
                     /locus_tag="U0290_002695"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465913.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)/FAD-dependent oxidoreductase"
                     /protein_id="HEM2302723.1"
                     /translation="MDEKTKIYDITIIGGGPVGLFAAFYAGMRNASVKIIESLPQLGG
                     QLSTLYPEKYIYDIPGYPAVRAQELVNNLIQQMKPFDPTIALEEAVQSVEKQVDGTFE
                     IITKKDTHYSKAVIITAGNGAFEPRRLDLPEAEQYEGKNIHYFINDLSRFSGRRVAVC
                     GGGDSAVDWALMLEKVASSVAIVHRRNAFRAHEHSVNNLEKSSIAIKTPFIPTEVLGN
                     GDKLTHITLQEVKGDTRETLEIDDFIINYGFVSSLGPIKNWGLELERNSIVVNSKMET
                     SIPGIYCAGDICTYDGKVKLIATGFGEAPTAVNNAMNFIDPKTRVQPMHSTSLFE"
     gene            3651..4280
                     /locus_tag="U0290_002696"
     CDS             3651..4280
                     /locus_tag="U0290_002696"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SDR family oxidoreductase"
                     /protein_id="HEM2302724.1"
                     /translation="MNVLVIGANGKIGRLLVEKLAMEKGFFVRAMVRKAEQVSELEKL
                     GAKPIIADLKKDFHYAYDEIEAVIFTAGSGGHTPASETINIDQNGAIKAIETAKEKGV
                     RRFIIVSSYGADNPENGPESLIHYLKAKQAADEELKRSGLDYTIVRPVGLSDDPATGK
                     IAEVSEKPTTTIPRADVADFISEALSEKSSFYKTYTIESGDTPIKHFFD"
     gene            complement(4326..4559)
                     /locus_tag="U0290_002697"
     CDS             complement(4326..4559)
                     /locus_tag="U0290_002697"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzB family protein"
                     /protein_id="HEM2302725.1"
                     /translation="MNPIVEFCVNNLASGADAAFAKLDADDSLDVIEYDCLTYCDLCA
                     TSLFALVDGEVVRGETAEELVANIYTFLEENPF"
     gene            complement(4581..4907)
                     /locus_tag="U0290_002698"
     CDS             complement(4581..4907)
                     /locus_tag="U0290_002698"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465916.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YuzD family protein"
                     /protein_id="HEM2302726.1"
                     /translation="MVNEAKLYVYGSTTICASCVGAPSSKETEEWLRAAIGRKFSGQP
                     FVVEYVDIFNPPNEKALADMANKIVEEDYMYPVIVVDGEIIAEGNPRLKDIYQVMTDR
                     GYLATM"
     gene            complement(5148..5330)
                     /locus_tag="U0290_002699"
     CDS             complement(5148..5330)
                     /locus_tag="U0290_002699"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465917.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302727.1"
                     /translation="MCGGRILREGLHARFTRMHIWPVTRFASNGPNKNTFLRLRKERA
                     LSTGKVERQLGCAPNC"
BASE COUNT         1791 a         1320 c          981 g         1771 t
ORIGIN      
        1 tctttatgag caatcccagt tatacataat gttagaaaaa tcacgattga ttaaatcttg
       61 cttgttgatg aaaaagttac cgacaccgca gtccccccac ataattgcca ttctactctc
      121 atcaaaatcc tcagatgcta attgaaacaa aagcgtgtca tgatgcgggt tttctgtata
      181 catacgcgga tcttcttgtg taaaaaaagg atatccgcca atttgactac attctttacc
      241 cagttgatat aatgcttcag atttatcttc atcctccgcg aaaatttggt cagccagctc
      301 ataaaaatta cttccaaatt cattttcaaa atcaaagcta tcttgtaata gaatctgatc
      361 tgaaacttgc ccagctattt taaactcacc attaacaacg gggtaaaagt ccgactttgc
      421 tacatcttca aaaaatgcat cttgttcttc agcagttaag ctctcacttc ccaagtcatc
      481 aaagaaaaac actcgaaaac cttcttggct cgttggattt tcaaaattaa gtccgtacaa
      541 atcatcttga taatccacat aaaaagcgag taagccaaat tccggataat tttccatttg
      601 tggcatttct gaaaaattaa tttgtgttaa taaagacagc ggtttacctt cttcggtcac
      661 tggatagcct tgctctctcg gcaagtaacc acgcccacca gctttacttt gcaacaatga
      721 aagcttacca acatccttaa aatgcagttc tatacgctct ttctctgttt ctaaaaatcg
      781 ttcggcccat tcactaggaa gtatatcaaa aagttgttcc atgacttacc ttctttcttt
      841 ttttctaatt ataacatgaa aaaagcgcca tatctgacaa aagcagatac agcgcttctt
      901 gaatttttat ttatagaatt tgaatttccc tttacttgcc aagacgcctg aaccaccaat
      961 tagtaatagc gcgcggtcat caatgacttt tttcataacg gaagctggat agcctttcaa
     1021 gtttttaccg aaaacgacac caattgcatc gttatcgcct agagagcaaa ctgttccttt
     1081 ttcatgataa acaaagtctt gtagatctgt ttcgccttta actaatttag ctaagttcac
     1141 tgcagccaca tcggcttgtt gcattgcgat ttgggcagtt ggtgggaatg gacggtcgtt
     1201 tgctgggttg atgattagtg agcagtcacc aacaattaaa atttcctcgt taccaggaac
     1261 agttaaattg ttgtttactt tcacacgacc acgaccagct tcaaagccag atgcttcaat
     1321 tacgctattg ccacgaacac ctgcagccca aataatggtt gctgctttga tttcacgaac
     1381 ttcattttca ctttccgcat attttacgcc atcagcggta gcttctttga ctggtttacc
     1441 gacatggaat tctacgccgc gatcttccag tacaccaaca ccataatcaa ccagtttcgc
     1501 atcaaattgt ggtaatactt ttggagctgc ttccatacaa taaatgcgca ctttttcgcg
     1561 aggcacatcg tactctttca ctagttctgg aatgcgatta gttaattccc caagaaactc
     1621 aattccagta aagccagcgc caccaacgat aattgttaat aattcatcgc gtggatctgt
     1681 tttccattta gcaaattgcg cttcaatgtg cgcacggatt tttttgacgg attctacact
     1741 tgtaatagtg aaggcatatt ctttcaaacc actgattcca aatgtttctg cttctgaccc
     1801 aagagcaatt aataaatagt catagctgat atcgccattt gcatctagtg tgactgtctt
     1861 ttcgtcttta ttaattttta ctacagtatc ttggataaat gtagttttcg tattgtttac
     1921 gactttatca agtggataca ttagtttttc tggctcaatt gttccagctg ctgcctcgtg
     1981 taaccaagtc gtttcgtggt gatagtcatt cttattcact agaacgattt cggcttccaa
     2041 gtttctttgt tgtaacttgc gtaaagtttt tagtcccccg tatcctgctc cgagaatgac
     2101 aatttttggt ttactcatct gttatcacat ctactttccc ttatattttt cttcacaaaa
     2161 aaaattgcat taagaatttc ttactgcacc tatgtagatt gcgctaaaaa tctactgcaa
     2221 acaatgaata aagtgaaaat ggtaagtacc aatatattcc ctatttcaca gcttacaaac
     2281 tatatcatag actttttcac attcattttc aagaaagcga actcaagggt ttaagcttct
     2341 ttgtagcatg gttcgagtgg tatacgattt ttttcacaat aaagctttga gatggcttga
     2401 ttttcgtaaa tatcttttat ttgatggata attggtctag ttcattatta tactattttt
     2461 attgcagcaa tcccgtaaac attctttttt cataatctat gctaaaatat gcttattgca
     2521 actttagcga tttcataggg aaattacgaa ctagggggtg atgtattttg gatgaaaaaa
     2581 caaaaattta tgatatcacg atcattggtg gtggaccggt tgggctattt gctgcgtttt
     2641 atgccggaat gcgcaatgcg agtgtgaaaa taatagaaag tttaccgcaa ttaggtggac
     2701 aactttccac gctttatccc gagaaatata tttatgatat tccgggctat cctgctgtac
     2761 gcgcacagga acttgttaat aacttgattc aacaaatgaa accatttgat ccaaccattg
     2821 cgctagagga agcggttcaa agcgtagaaa aacaagttga tggcacattt gaaatcatca
     2881 cgaagaaaga tacacattac agtaaagctg ttattattac cgctggaaat ggcgcatttg
     2941 aaccaagacg tttggatctt ccagaagcag agcaatacga agggaaaaac attcattatt
     3001 tcatcaatga tttaagtcgc ttttcggggc gtcgcgttgc cgtttgtggt ggtggggatt
     3061 ccgcagtgga ctgggcactc atgcttgaaa aagttgccag ttctgtcgcg atcgttcatc
     3121 gtcgtaatgc ttttcgtgcg cacgaacata gcgtgaacaa tttagaaaaa tcttccattg
     3181 ccatcaaaac accatttatc ccaactgaag tactcggtaa cggcgataaa ttaacgcata
     3241 ttactttgca agaagtcaaa ggtgatacaa gggaaacact ggagattgac gatttcatca
     3301 ttaactatgg tttcgtttct tcgcttggtc caattaaaaa ttggggccta gagctagaac
     3361 gcaattcgat tgtcgttaat tcaaaaatgg aaacgagtat cccaggaatt tattgtgcag
     3421 gtgatatttg cacgtatgac ggtaaagtaa aactaatcgc gaccggattc ggtgaagctc
     3481 caacagctgt taataacgcg atgaatttca ttgatccaaa aacacgcgtg caaccaatgc
     3541 actccacatc tttattcgaa taacaaccga aaccacgagg cgacttgtgg ttttattttt
     3601 tactcaccgg gaaaagttct ttgtagatat tttttaggag gagattagca atgaatgtac
     3661 tcgtaattgg cgcaaatggc aaaatcggcc gtcttttagt agaaaaactt gccatggaaa
     3721 aaggcttttt cgtccgagca atggttcgaa aagccgaaca agtaagcgaa cttgaaaaac
     3781 ttggcgctaa gccgattatc gccgatttaa aaaaagattt ccactatgcc tatgatgaaa
     3841 ttgaagctgt tattttcaca gcaggatccg gtggtcatac gcccgcttcc gaaactatca
     3901 acattgacca aaacggcgcc atcaaagcca tcgaaactgc taaagaaaaa ggtgtacgtc
     3961 ggttcatcat tgttagctct tatggcgccg acaatccaga aaacggtccc gaatccctca
     4021 tccattattt aaaagccaaa caagcagccg atgaagaact aaaaagaagc ggtctcgact
     4081 acaccatcgt ccgcccagtt ggcctttcag atgatccagc tactggcaaa atcgctgaag
     4141 tttccgaaaa acctacaacg actatcccgc gcgctgatgt tgcagatttt attagtgaag
     4201 ctttatccga aaaatctagt ttctataaaa cctataccat cgaaagtggc gacacaccca
     4261 ttaaacattt ttttgattaa taaaaagcga tgagccaaat tacgcgctca tcgctttttt
     4321 ctatattaaa acggattctc ttccaaaaat gtatatatat tcgcaaccaa ttcttctgct
     4381 gtttctccgc ggaccacttc cccgtccact aaagcaaaca aactcgtcgc gcataaatca
     4441 caatatgtca gacaatcata ttcaatcacg tctaaactat catccgcatc taatttcgca
     4501 aaagctgcat ctgccccgct cgccaaatta ttcacgcaaa attccacaat cggattcatt
     4561 tccacttgcc tcctagactg ttacatcgtt gccaagtaac cacggtcggt cattacttga
     4621 taaatatctt tcaaccgagg attgccttcc gcgataattt caccatcaac cacaatgact
     4681 gggtacatat aatcttcctc gacaatttta ttcgccatat ccgctaaagc cttctcattc
     4741 ggcggattaa aaatatccac atactccacc acaaacggct gccctgaaaa cttccgacca
     4801 attgcagctc gaagccattc ctctgtttcc ttcgaggatg gcgctccgac acaactcgca
     4861 caaatagtcg ttgaaccata aacatataat ttcgcttcat ttaccatcac gcttcacctc
     4921 actattattg tacaaaaacc caccaaaaaa agcgactaag ctgtttcacg aagcataact
     4981 attaaatttt atgaattttt ataaagatat gaattgacac gaatttacag atatattata
     5041 atatttccaa tacattgcta atctttaaag cagtagtgta ttaatatgat aaattatctc
     5101 taggttgtac ccgtgatttc acggtcaaca tataagtaac actcccttta acaattgggc
     5161 gcgcaaccca attgtctttc aaccttacca gttgaaagag cacgttcctt tctgagcctt
     5221 aggaacgtgt ttttgtttgg cccgttcgaa gcaaagcgag ttacgggcca aatatgcatg
     5281 cgagtgaaac gagcatgtaa tccttcccgt aaaatgcgcc ctccacacaa cctttcaccc
     5341 agcatcaaaa tccttccacc atctatcgaa aacccacact cccattcacc cgttcgaagc
     5401 aaagcgagtt acgggccaaa tatgcatgcg agtgaaatga gcatgtaatc cttcccgtaa
     5461 aatgcgccct ccacacaacc tttcacccag catcaaaatc cttccaccat ctatcgaaaa
     5521 cccacactcc cattcacccg ttcgaagcaa aacgaattac ggcccaaata tgcatgcgag
     5581 catgtaattc ttcccgaaaa atatatcctc caaacaaata cttttcaata ctttcagaat
     5641 aatataaaat cattgcccaa tttatatgtt atatatatcc atctacatcc ttttaacgtc
     5701 tgtctattga agaaaaacct agctctatca acacattccc atcgtaaaac agtactaaaa
     5761 acaattatgt cgaaaccttg aacctcactc tattttaagt aaatcccatc aaaaaaacca
     5821 tgcttaataa agattcctca tgatattata actttgctta gaa
//
LOCUS       DASDYO010000154         5447 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.154, whole genome shotgun sequence.
ACCESSION   DASDYO010000154 DASDYO010000000
VERSION     DASDYO010000154.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5447)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5447)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5447
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.154"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            69..1109
                     /locus_tag="U0290_002700"
     CDS             69..1109
                     /locus_tag="U0290_002700"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464086.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactonase family protein"
                     /protein_id="HEM2302728.1"
                     /translation="MSKNQATAYIGTYTKAESQGIYRLVIDKTTGEIKENKLAGKMDN
                     PTYLKISDDEKFVYSVAKDGDKGGVAAFSVEEDGSLTFIGQDVQTGNPPCYVDASHDG
                     SIVVSANYHLGTIVSYPTENGALKPSVSTIQHTGKSVHERQEKPHAHFAGFTPDQKYV
                     ITCDLGTDKVTTYSATAGKLEKVTELDVKPGSGPRNLVFHPNAKYVYIMTELTSEVIF
                     AEYDEATGALNVIQTIASLPEGFDKENKGSAIHISPDGRFLYVSNRGQDAIVSYAVAE
                     NGTLTLAATTPVEGVGPRDFDLSYTGEILVATNENSNNVTVFGVNKETGALTLLQKDV
                     KVPEPVCIKFVK"
     gene            complement(1151..1846)
                     /locus_tag="U0290_002701"
     CDS             complement(1151..1846)
                     /locus_tag="U0290_002701"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464085.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2302729.1"
                     /translation="MATGKLNVYLVRHGKTMFNTSRRVQGWSDTPLTNEGIEVAEFLG
                     RGLRETPFDAIYTSDRGRTIETAGIILRESKQTHLEINELRDFREFGFGKFEGEYEDI
                     MFGKVMEHLGFQSMEEAFEKFGDDGYQIISETVEKIDETGMSENWDEMVARLKNALDT
                     VSAENQVENANVLVVSHGMAINTIISFFDKSLINPDLANASVTRLAFENGKWTIETVN
                     DLSYIEAGKLVLV"
     gene            complement(1847..2554)
                     /locus_tag="U0290_002702"
     CDS             complement(1847..2554)
                     /locus_tag="U0290_002702"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464084.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2302730.1"
                     /translation="MESSSRVVIYLTRHGKTILNTLDRVQGWADSPLTEEGALVAHDL
                     GRGLKGTNFVAAYASDRGRAIETARIVMKESDNYHLKLEKLAEMREFGFGKFEGEYNQ
                     AVLKMVAKAHGFESIESYYDKTSENNSNIVIDTVHKMDETGMTENSAIFEERLTAGLD
                     TILADANKRGGGDVLVVAHGMVIHRIIEMIDPSKNLRIIENASVTKVIFEDGAYSIEE
                     PGNMFYVEAGKKAQGGV"
     gene            complement(2683..4161)
                     /locus_tag="U0290_002703"
     CDS             complement(2683..4161)
                     /locus_tag="U0290_002703"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptide MFS transporter"
                     /protein_id="HEM2302731.1"
                     /translation="MSTKKEKTFFGHPRGLATLFNTEFWERFSYYGMRALLLYYMYTA
                     VADGGLGFSQSTATAIMSIYGSLVFMSGVIGGWFADRVLGARQTIFYGGVLIMVGHIV
                     LALPNGGAAALFGSMAFIILGTGLLKPNVSNVVGDLYPAGDNRRDAGFSIFYMGINLG
                     AFIAPPIVSAVSDNAGSFHAGFGVAAVGMAIALVVYVLTGKRYLKDAGKKAPNPLQKS
                     EAKSLIFKIIGIVLGIGLLIAVLTLITGSLTIDTIILAVTVMGVGVPLAYFIMMMTSK
                     KTEADEKSRLTAYIPLFLIAVLFWMIEEQGSSTLALFAAERTDLSIWGMNLNPANFQS
                     LNPVFVITLSPIFAWIWTKLGDRQPSTPRKFALGLFFAGLSFVVMMLPGILHGNTTTL
                     VSPLWLVLSFFICIFGEMFISPVGLSATTKLAPKAFASQTMSLWFLSDAMGQSFNAQL
                     TQLFNADTEIAYFGITGFVAIAFAVALFIFAPFLKKYMKGVH"
     gene            complement(4251..5432)
                     /locus_tag="U0290_002704"
     CDS             complement(4251..5432)
                     /locus_tag="U0290_002704"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464082.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="iron-containing alcohol dehydrogenase"
                     /protein_id="HEM2302732.1"
                     /translation="MQKEMLNFDYYNPTHIIFGKNRFNELNEVIPQDKKVLILYGGGS
                     VERFGTLDKVKTALKSREVGEFGGIEANPTYETLIKAIRLVKEENYDFLLAVGGGSVI
                     DGTKFVAAGALFDGEPMDIFGSGIGEKRPITKALPFGTVLTLPATGSEMNSGGVITFV
                     EKKAKLGFGSAYTYPVFSLLDPELTYTLPKRQLANGIMDAYVHVMEQYMTYPVGALLQ
                     DRYAESLLQTLIEIGPDVIKEDNHDYNTRATFMWSATNALNGTLSRGVPQDWASHSLG
                     HEITALYGIDHARTLAIVLPSLLNVRRSEKHEKLVQYAERVWGIKSGSDEEKIDAAIL
                     KTREFFESLGAGTRFSDYGLGEEVVDLLVDQLERHGLTNISERGDQTLEVSRQIYTNA
                     L"
BASE COUNT         1704 a         1215 c          906 g         1622 t
ORIGIN      
        1 atttttctat cttttcttta ctatgctata attaactagg aaatatctta tatataggag
       61 gaattggcat gtcaaaaaat caagcaactg cttatatcgg tacatatacc aaagccgaga
      121 gccaaggtat ctatcgctta gtaatcgaca aaactaccgg cgaaatcaaa gaaaataaat
      181 tagctgggaa aatggacaat ccaacatatc ttaaaatttc agatgacgaa aaattcgttt
      241 attctgtagc aaaagatggc gataaaggtg gggttgcagc tttttctgtg gaagaagacg
      301 gttcgcttac tttcatcggt caagatgttc aaacaggtaa cccaccatgt tacgtagatg
      361 cctctcatga cggttctatc gttgtatctg caaactatca cttaggcaca atcgtaagct
      421 atccaacaga aaatggtgca ttaaagcctt ctgtttctac cattcaacat actggtaaaa
      481 gtgttcacga acgccaagaa aaaccacacg cgcactttgc aggattcaca ccagaccaaa
      541 aatacgttat cacatgtgac cttggaacag acaaagtaac gacttattcc gctactgctg
      601 gcaaacttga aaaagtaact gagctagacg taaaacctgg aagcggtcct cgtaacctag
      661 tcttccatcc aaatgctaaa tatgtgtaca tcatgacaga attaacttcc gaagttattt
      721 ttgctgaata tgatgaagct actggcgcat taaacgtgat tcaaacaatc gcttctcttc
      781 cagaaggttt tgacaaagaa aataaaggta gcgctatcca tatttctcct gatggtcgtt
      841 tcctatatgt gtcaaatcgt ggccaagatg ccatcgttag ttatgcagtt gccgaaaacg
      901 gcacactaac acttgcagca acaacaccag tagaaggcgt aggtccacgt gacttcgacc
      961 tgagctacac tggcgaaatc ttagttgcaa caaacgaaaa cagcaataac gttactgttt
     1021 ttggtgttaa caaagaaact ggtgcactta cattacttca aaaagatgta aaagttcctg
     1081 aaccagtttg tattaaattc gtaaaataac ttaaaaaatc cagaatggcc tcagtgccat
     1141 tctggatttt ttatactaaa actaatttac ctgcttcaat gtaacttaaa tcattcactg
     1201 tctcaattgt ccatttgcca ttttcaaatg caagtcttgt aacacttgca ttagctaagt
     1261 ctggattaat taatgactta tcaaagaaag aaataatcgt attaatagcc attccgtgag
     1321 aaacaactaa aacgttggca ttttccacct gattttctgc actaactgta tctaaagcat
     1381 tttttaatct agcaaccatc tcatcccaat tctcggacat accagtttca tcaatttttt
     1441 ctacagtttc cgagataatt tgataaccat catcgccaaa tttttcaaaa gcttcttcca
     1501 tcgactggaa accaagatgc tccatcactt ttccaaacat aatatcttca tactcacctt
     1561 caaatttacc aaaaccaaac tcacggaaat cacgtagttc attgatttcc aaatgcgtct
     1621 gcttgctttc acgtaaaatg atgcctgccg tttcaattgt tcgaccacga tcactcgtat
     1681 aaatagcatc aaagggagtt tcacgaaggc cacgacctaa aaattctgcc acttcgattc
     1741 cttcatttgt taatggtgta tctgaccagc cttgcacacg acgagatgta ttgaacatcg
     1801 ttttgccatg cctaactaag tacacattca gttttcctgt tgccacttaa actccccctt
     1861 gcgccttttt tccagcttct acataaaaca tgtttccagg ttcttcaatc gaatatgctc
     1921 catcttcaaa aataactttt gtcacactgg cattttcgat aattcgtaaa tttttactag
     1981 gatcaatcat ttcaataatg cgatgaataa ccataccgtg cgctactact aacacatctc
     2041 caccaccacg cttattagca tcggcaagaa tagtatcgag tcccgcagtt agtctttctt
     2101 caaaaatagc cgagttttcc gtcattccag tctcatccat tttgtgcacc gtatcaatga
     2161 caatattgga attattttca gaagttttat cataatagct ttcaatagat tcaaaaccat
     2221 gcgcctttgc taccattttt aaaacagctt gattatattc cccttcaaat ttgccaaagc
     2281 caaattcacg catttcagct aatttttcta gttttaaatg atagttatcg ctttctttca
     2341 ttacaattcg tgcagtttcg atggcacgtc ctcggtcact tgcgtaagcg gctacaaaat
     2401 tagtcccttt taagccacga cccaaatcat gcgcaacaag tgctccttct tcagtaagcg
     2461 gtgagtccgc ccagccctgc acccgatcaa gtgtgtttaa aatcgtcttt ccatgtcgcg
     2521 ttaaataaat aactaccctg cttgatgatt ccatgtatac actcctttaa attatcactt
     2581 ctccctttaa tagtagcaat cttaggagtt aatggcaaac taatttattc ctagcataaa
     2641 aaaacacttc ctccaaataa ggagaaagtg cgcttaattc ctttaatgaa cgcccttcat
     2701 atattttttc aagaatggcg cgaaaatgaa taatgctacc gcaaaagcaa ttgctacaaa
     2761 accagtaata ccgaaataag caatttcagt gtcagcatta aataattgtg ttaattgtgc
     2821 gttaaatgat tgccccattg catctgacaa gaaccataag ctcatcgttt gtgaagcaaa
     2881 agcttttggc gctagtttgg tagtcgcaga taatccgact ggtgagataa acatttcacc
     2941 gaaaatacag atgaagaaac ttagtactaa ccaaagcgga cttacaagcg ttgttgtgtt
     3001 tccgtgcaag atacccggaa gcatcataac aacgaaagat aaaccagcga agaatagtcc
     3061 aagggcaaat ttacgtggtg tagatggttg tctatcacca agtttcgtcc aaatccatgc
     3121 gaaaattggc gaaagtgtaa taacaaacac tgggttaagc gactggaaat tggctggatt
     3181 taagttcata ccccaaatag ataaatccgt tctttctgcc gcgaaaagcg ccaatgtgga
     3241 cgagccttgt tcttcaatca tccaaaatag tacagcaatt aaaaataacg gtatgtatgc
     3301 agttaatcgt gatttttcgt ccgcctcggt tttcttgcta gtcatcatca taataaagta
     3361 agcgagtgga acccccacgc ccatcaccgt tacagcaagg ataatcgtat caattgttaa
     3421 gctacctgta attagtgtta aaacagcaat taataatcct atgcctaaaa caatgccaat
     3481 tattttgaat ataagacttt ttgcttctga tttttgaagc ggatttggcg cttttttgcc
     3541 agcgtctttt aagtaacgtt ttcctgtaag aacataaaca acaagtgcaa ttgccatacc
     3601 aacagctgcc acaccaaaac cagcatggaa acttccagca ttatcagaaa ctgccgaaac
     3661 aataggcggg gcaataaatg cacctaagtt aatccccatg tagaagatac taaaaccagc
     3721 atcacgacga ttatcgccag ctgggtataa atcgccaacg acattagaaa cattcggttt
     3781 aagtagccca gttccgagaa ttataaatgc catcgaacca aataatgccg ctgctcctcc
     3841 atttggtaaa gctagtacaa tatgccccac cataataagg actccaccgt aaaaaatggt
     3901 ctgtcgtgcc cccaagacac ggtcagcgaa ccatccacca atgactcctg acataaatac
     3961 tagtgaacca taaatagaca taattgctgt tgcggtagac tggctaaacc caagtccacc
     4021 atctgctact gcagtataca tataataaag taataatgca cgcattccgt aataggagaa
     4081 tcgctcccaa aattcggtgt taaataatgt agctaggccg cgcggatggc cgaaaaacgt
     4141 cttttccttc ttggtactca agaaatttcg ccctctttca ttttctattg atttttattt
     4201 aagtaagcaa atttcttctc taatgatttg cgcaaaagtt tcgttatcca ttataaagca
     4261 tttgtataaa tttgacgaga tacttctagc gtttggtcgc cgcgttctga aatattcgtt
     4321 aaaccgtgac gctctaattg atcaacgagt aagtccacta cttcctcgcc aagcccataa
     4381 tcactaaatc tagttcctgc tcctaagctt tcaaagaact cgcgtgtttt gagaatagca
     4441 gcgtctattt tttcttcatc actaccactc ttaatccccc acactcgttc cgcatattgc
     4501 actaatttct catgcttttc actgcgacga acatttaaaa gagacgggag aactattgct
     4561 aacgtacgtg catggtcaat cccataaagt gcggtgattt cgtgacctaa actgtggctt
     4621 gcccaatctt gcggaacgcc tctggataat gttccattga gtgcatttgt agctgaccac
     4681 ataaaagtag cacgtgtatt ataatcatga ttatcttctt tgataacatc tggaccaatt
     4741 tcgattaaag tttgtagtag actttcggca taacgatctt gcagcaaagc acctactgga
     4801 taagtcatat attgttccat tacatgcaca tacgcgtcca taataccatt tgcaagttga
     4861 cgttttggaa gtgtgtatgt aagttctgga tcaagtaaag aaaaaacagg ataagtataa
     4921 gcactaccaa agccaagttt cgctttcttc tccacaaaag tgattacacc accgctattc
     4981 atttcagaac cagttgcagg aagtgttagt actgttccaa aaggaagcgc ttttgtaatc
     5041 ggacgttttt cgccaattcc gctaccaaaa atatccatcg gttcaccgtc gaacaatgct
     5101 cccgctgcaa cgaattttgt tccgtcaatc actgaccctc caccgactgc aagtaaaaag
     5161 tcatagtttt cttctttaac tagtcggata gctttaatta acgtttcgta tgtaggattc
     5221 gcttcaatgc caccaaattc gcctacttcg cgtgatttaa gagcggtttt tactttatct
     5281 aaagttccaa aacgttctac acttccacca ccatacaaaa tcaatacttt tttatcttga
     5341 ggaatcactt catttaattc attaaaacgg tttttaccaa aaataatatg agtagggtta
     5401 taataatcaa agttcaacat ttctttttgc atgttaacgt ccttctt
//
LOCUS       DASDYO010000155         5436 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.155, whole genome shotgun sequence.
ACCESSION   DASDYO010000155 DASDYO010000000
VERSION     DASDYO010000155.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5436)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5436)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5436
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.155"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            147..800
                     /locus_tag="U0290_002705"
     CDS             147..800
                     /locus_tag="U0290_002705"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465023.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="O-methyltransferase"
                     /protein_id="HEM2302733.1"
                     /translation="MNDIIHDYLLKNIPKSSPFFEELEAYAKENEVPIMEPDSLYCLL
                     QILDIQKPKRILELGTAIGYSALKMADKLPDAEIITVERDEERYEQAIHNIQRYGAND
                     RVKVLLTDAIEGAEEILAHGPFDAIFIDAAKAQYEKFFHIYTDSLAENGVIYSDNVLF
                     KGLALDMTPEKQRKLRVARKMRHFNDFLVTHPDFETTTIPLGDGLSISKRKKTGGVS"
     gene            797..1426
                     /gene="udk"
                     /locus_tag="U0290_002706"
     CDS             797..1426
                     /gene="udk"
                     /locus_tag="U0290_002706"
                     /EC_number="2.7.1.48"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465022.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="uridine kinase"
                     /protein_id="HEM2302734.1"
                     /translation="MTKKPIVVGVTGGSGSGKTSVTKAICDHFSGHSILMIAQDVYYH
                     DQANISFEDRLKVNYDHPLAFDTDLLISHIAALRRYETIEKPIYDYAKYTRKKEVEIQ
                     EPREVIILEGILILEDKRLRDLMDIKVYVDTDDDIRFIRRLLRDMKERGRTMDSVIEQ
                     YLSVVKPMHNEFIEPTKKFADIIIPEGGENHVAIDLMTTKIESILQKHV"
     gene            1620..2102
                     /gene="greA"
                     /locus_tag="U0290_002707"
     CDS             1620..2102
                     /gene="greA"
                     /locus_tag="U0290_002707"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcription elongation factor GreA"
                     /protein_id="HEM2302735.1"
                     /translation="MATEKVFPMTLDGKAKLENELQELKTVKRKEVVERIKIARSFGD
                     LSENSEYDSAKDEQAFVEGRITTIENMIRNAQIIDAAEAHNGLVTLGNTVTFIELPDG
                     EEETYTIVGSAEADPFEGKISNDSPIAKGLLGHKEGEEVTIQTPAGDMSVKIEKITAS
                     "
     gene            2153..2776
                     /locus_tag="U0290_002708"
     CDS             2153..2776
                     /locus_tag="U0290_002708"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YrrS family protein"
                     /protein_id="HEM2302736.1"
                     /translation="MADKRQSNNRRIKQNLVEGSRSQQNTKRKKTNLVLNVLIIVVSL
                     LIIGSLYFVLFKTESDPTQQDNKTASSTAKKEDAAKSSEKKKDSSDDKTTETTESDDP
                     NVAKVITKDWKPIGTEQTGDHVNSYSSTSVDWQEKRKAFSAATDIPISNTSLWFVEQG
                     ADPATQAIGTLSTKENPDKAYRVYITWVDGEGWQPTKVEELKTNDKR"
     gene            2826..3527
                     /locus_tag="U0290_002709"
     CDS             2826..3527
                     /locus_tag="U0290_002709"
                     /EC_number="3.2.2.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465019.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="5'-methylthioadenosine/adenosylhomocysteine
                     nucleosidase"
                     /protein_id="HEM2302737.1"
                     /translation="MTIGIIGAMEEEVELLKNSMPSVEEIVIGGAKFYVGEIAGKEVV
                     LLESGIGKVNAALGTTLMADRFKPEVIINTGSAGGMAEGLAVGDVIISDRLAYGDVDV
                     TEFGYTYGQVPRMPAFYQGDAVLLKKAETIYREYFAASENKAVYGLVVTNDSFIMRPD
                     QHETIRTFFPDVKAVEMEAAAIAQVAYQFDIPFLIIRAISDLANQEATISFDEFIHLA
                     AKQSATCIIELLKTI"
     gene            complement(3563..5371)
                     /locus_tag="U0290_002710"
     CDS             complement(3563..5371)
                     /locus_tag="U0290_002710"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465018.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M3 family oligoendopeptidase"
                     /protein_id="HEM2302738.1"
                     /translation="MSKDYALTWDLENIYAGGSGSEELQQTLQEVKADLDSFVVNVSE
                     WDVPENVEASAEFLLLVNQNADISKILLTAGSFLECLASADINDSRANELSALIYQYV
                     ATLATAEDEWHDKFAQVSDRVWDELMEQNGLSQISFILSEARTNRRKKGSKEQEAAIN
                     SLAVDGYRGWSDHYDTIVGKLRMHVTINGEEKDVSAGQALNLLNHPDRAVRQAVFKEY
                     TRVWQSEARLFSDTLNHLSGFRLATYEIRKWDNILDEPLAINRLDEQTLKSMWNVIQT
                     NKPTFVRFLDRKAKLLGLEKLSFYDVEAPLVFSSEPKKYSYQEGAEFIIEQFNKFSPK
                     MANFAQSAFEKGWIEAEDRDNKRPGGFCTDFPVEKESRIFMTYDGAPGTVATLAHELG
                     HAFHSHVIRDEPFENTDYAMNVAETASTFAEMIIADASVKDAKTKEEKITLLEDKIGR
                     SIAFFMNIHARFIFECNFYEARKQGVVSVDRLNALMEEAQREAYLDALDEYHPQFWAS
                     KLHFYIADVPFYNFPYTFGYLFSLGIYHKAQAEGASYEDKYIALLQDTGSMTTEQLAE
                     KHLGVDLRKADFWEEAVALAAKDVEDFLTLTEEYIK"
BASE COUNT         1795 a          974 c         1066 g         1601 t
ORIGIN      
        1 aagtatactt ctctaaaact ttagaagagc acaataaact aaaagaagag catattacga
       61 aaaataatta aaacaaccac ttgtcagaag catgtttagc atgtttttgg caggtgcttt
      121 gtttgttaag ataggggatc ctagcagtga atgatattat tcatgattat ttattaaaaa
      181 acattcctaa gagcagtcct ttttttgaag aattagaggc gtatgcgaag gaaaatgaag
      241 taccgattat ggaaccagat tctttgtact gcttattaca gattttagat atccaaaaac
      301 caaagcgcat attggagctt gggacggcca ttgggtactc cgctttaaaa atggcagata
      361 aacttcctga tgcagagatt atcacggttg agcgcgacga agaacgatat gagcaagcaa
      421 tacataatat tcagcgctac ggggctaatg acagagtgaa agttttatta acagatgcta
      481 ttgaaggggc tgaagaaatt ttggctcacg gtccatttga cgcaatattt attgatgcag
      541 ccaaagcgca atatgagaaa tttttccata tttataccga ttctttagct gaaaatggcg
      601 ttatttatag tgataatgtt ctttttaaag ggttagcgct agatatgaca ccagaaaaac
      661 aacgcaaatt acgtgttgct aggaaaatgc gccattttaa cgatttttta gtgacgcatc
      721 ctgattttga aacaacgacc attccactag gggacggcct atctatttcc aaaagaaaga
      781 aaactggagg cgtatcatga caaaaaaacc aatcgtagtc ggcgtaactg gcggttcagg
      841 ttctggtaaa actagtgtaa cgaaagccat ttgtgatcat tttagcggac actcgatttt
      901 gatgattgct caagatgtct attatcacga tcaagccaat attagttttg aagatagatt
      961 aaaagtaaat tatgatcatc cactagcttt tgatacggac ttactcattt cacatattgc
     1021 cgcactgcgt cgctatgaaa ccatagaaaa gccgatttat gattatgcca aatatacgcg
     1081 aaaaaaagaa gtagaaatcc aagaacctag agaggttatt attttagaag gaattttaat
     1141 tttagaagat aaacgcctta gggatttgat ggatattaaa gtatatgtgg ataccgatga
     1201 tgatattcgt tttattcgca gacttttacg cgatatgaaa gaacgtggtc ggacaatgga
     1261 ttctgttatc gagcaatatc tttctgttgt taaaccaatg cacaatgaat ttatagaacc
     1321 aacgaaaaaa tttgccgata ttattattcc agaaggcgga gagaatcacg ttgcaatcga
     1381 cttaatgaca acaaaaattg aatccatttt gcaaaaacat gtataaacaa caggtatcac
     1441 ttgtcaaata gagaaattta aggtaaaatt tttctagtaa aaagagtggc aattgcttgc
     1501 tatttctagc gtggcgtgtt aatctttctg acgagtagta atatttttga tgaaggtgcg
     1561 gagcgatatc tccgtgcttt tctatacaat aatgaacaaa caaaaaggag cgaaatcgat
     1621 tggcgacaga aaaagtattt ccaatgaccc tagatgggaa agcaaaatta gaaaatgaat
     1681 tacaagaatt aaagacggta aaacgtaaag aagtagtaga acggatcaaa attgcccgta
     1741 gttttggtga cttatcagag aactccgagt atgattccgc aaaagacgaa caagcttttg
     1801 ttgaaggtcg tatcactact attgaaaata tgattcgtaa cgcacaaatc attgatgctg
     1861 ctgaagcaca taatggttta gtaacacttg gaaatacagt tactttcatt gaactaccag
     1921 acggtgaaga agaaacttac acaatcgtag gtagcgctga agcagacccg tttgaaggta
     1981 aaatttccaa tgattctcca attgccaaag gtttacttgg tcataaagaa ggggaagaag
     2041 taactatcca aacaccagct ggtgacatga gcgttaaaat cgaaaaaatc actgcatctt
     2101 aatattatcg gatgttttta tacagcggtt acttataagg tggtgaatgc aaatggcaga
     2161 caaacgacaa tcaaataacc gtcgaattaa acaaaacttg gtggaaggat ctcgttccca
     2221 gcaaaataca aaacgaaaaa agactaattt agttttaaac gttttaatta tcgtggtaag
     2281 cttacttatc attggtagtt tgtattttgt gctgtttaaa acagagagtg atcctacgca
     2341 acaagataac aaaacggcat cttccactgc aaaaaaagaa gatgccgcta aatcatccga
     2401 aaagaaaaaa gattcttcag atgataaaac aactgaaaca accgaaagcg atgatcccaa
     2461 tgtagcgaaa gttattacca aagattggaa acctattggt acagaacaaa ctggtgatca
     2521 tgtgaattcg tacagttcca caagtgtaga ttggcaagaa aaacgtaaag ctttttctgc
     2581 agcaactgat atcccaatct caaatacgtc gctttggttt gtagagcaag gagctgatcc
     2641 tgcgacacaa gcaattggta cactctctac taaagaaaac ccagacaaag catatcgtgt
     2701 ttatattacc tgggttgacg gtgaaggatg gcaaccaacc aaagtggaag agcttaaaac
     2761 aaatgacaaa agataaaagc acagaagtta gctgttaacg actgtgcttt tttggaggtt
     2821 acataatgac aattggtatt attggagcaa tggaagaaga agtagaactt ttaaaaaata
     2881 gcatgccaag cgtagaagaa attgttattg gcggagctaa attttacgtt ggcgaaattg
     2941 ctggcaaaga agtagtgctt ttggagtcag gtattggtaa agtaaatgcc gcacttggaa
     3001 caacacttat ggcggaccgt tttaaaccag aagtaattat taacactggt tctgctggcg
     3061 gaatggcgga aggattagcc gttggtgatg ttattatttc tgaccgatta gcttatggcg
     3121 acgtagatgt aacggaattt ggttacactt acggtcaagt cccaagaatg ccagcttttt
     3181 atcaaggaga cgctgtactt cttaaaaaag cggaaaccat ttaccgtgaa tattttgctg
     3241 caagcgaaaa caaagcagtc tatggactcg ttgttacgaa tgattcattt attatgcgtc
     3301 cagatcagca cgaaacaatt cgcacttttt tcccagatgt aaaagcagtt gagatggaag
     3361 ctgcggcaat cgcacaagtt gcttatcaat ttgatattcc tttcttaatt attcgcgcta
     3421 tttcagattt agcgaatcaa gaagcgacta tttcatttga tgaattcatt cacttagcag
     3481 cgaaacaatc cgcaacatgt atcatcgaat tactaaaaac aatttaaaaa atgcctggag
     3541 tttttaagct ccaggcattt ttttatttga tatattcttc tgttaaagta aggaaatctt
     3601 ctacatcttt ggcagcaaga gcaacagctt cttcccagaa gtcagcttta cgtaagtcaa
     3661 cgcccagatg tttttctgct agctgttctg ttgtcatcga accagtgtct tgtagtagtg
     3721 caatgtattt atcttcgtaa ctagcacctt ctgcttgagc tttatggtaa atgccaagcg
     3781 agaacaaata accgaaagtg tacgggaagt tataaaacgg tacatcagca atgtagaaat
     3841 gtagtttaga agcccagaat tgtggatgat attcatccaa ggcgtccaag tatgcttctc
     3901 gttgcgcttc ttccattaga gcgttaagtc gatcaaccga aacgacacct tgtttacgtg
     3961 cttcatagaa gttacattca aaaataaagc gagcatgaat attcataaag aaggcgatac
     4021 tacgaccgat tttatcttcc aacaacgtga ttttttcttc ttttgttttt gcatctttca
     4081 cagaagcatc tgcaataatc atttctgcaa aagttgaagc ggtttccgcc acgttcatcg
     4141 cataatcagt attttcaaag ggttcatcgc gaatcacgtg tgaatggaat gcgtgcccaa
     4201 gttcgtgagc aagagtagcg actgttcctg gagcgccatc atatgtcatg aaaatgcgac
     4261 tttctttttc aacagggaag tcggtacaaa aaccaccagg acgtttatta tcacggtctt
     4321 ccgcttcaat ccaacctttt tcaaacgctg attgcgcaaa gtttgccatt ttcgggctga
     4381 atttgttaaa ttgctcaata ataaattcag cgccttcttg atacgaatat ttcttaggtt
     4441 cgcttgaaaa gacaagagga gcttctacat cataaaaact taatttttca aggccaagta
     4501 atttcgcttt tctatctaag aatcgaacaa aagtaggctt gttcgtttgg atgacattcc
     4561 acatagattt taacgtttgc tcatctaaac gattaattgc aagaggttca tctagaatat
     4621 tatcccattt acgaatttca tatgtagcta aacggaatcc tgataaatga tttaacgtat
     4681 cgctaaataa acgagcttca ctttgccata cacgtgtata ttctttaaaa actgcttggc
     4741 gaaccgcgcg atcagggtga tttaataagt ttagcgcttg gccagcagaa acatcttttt
     4801 cttctccgtt aatggtaaca tgcatgcgga gtttaccgac aatggtatca taatgatcag
     4861 accagccgcg ataaccatcg acagctaaag aattaatagc tgcttcttgt tctttactcc
     4921 cttttttacg gcggttcgta cgcgcttcac ttaaaataaa gctaatttgc gataaaccat
     4981 tttgttccat taattcgtcc caaacacggt cagaaacttg tgcaaatttg tcatgccatt
     5041 catcttcggc cgtagctaga gttgcaacgt attgataaat taacgccgaa agctcatttg
     5101 cacgcgagtc attgatatca gcggaagcaa gacattctaa aaatgatccg gcagtgagta
     5161 aaattttaga tatatctgca ttttgattaa cgagaagtaa aaattcagca gaggcttcca
     5221 cattttcagg aacatcccac tccgaaacat ttacaacaaa gctgtctaaa tcagctttta
     5281 cctcttgaag cgtttgttgt aattcttcag agccgctgcc gccagcatat atattttcta
     5341 aatcccatgt taatgcataa tcttttgaca tttgtttacc tccttaaaaa taacgtttcc
     5401 tttcatatta tagcattttt ctaaggtttt tttgta
//
LOCUS       DASDYO010000156         5423 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.156, whole genome shotgun sequence.
ACCESSION   DASDYO010000156 DASDYO010000000
VERSION     DASDYO010000156.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5423
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.156"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(81..905)
                     /locus_tag="U0290_002711"
     CDS             complement(81..905)
                     /locus_tag="U0290_002711"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302739.1"
                     /translation="MPSKWRGICGSLLIALGITQLYSFISAVIGYFNAEENSFVFVWN
                     YWMLLFFGVGLFIIGFVFMRKESFRLASIIGVICFVLFQGFSVYYYQLRILSKLEYAQ
                     PFEWSGTLLCILGLLVLIALLIGPKFQAKEIQADQAWKTKWRYAAGVFSLLGAVTSVF
                     AAVTIFRQLHSDNIKEGYLFTTVLDGYFACFMAVIFLLVVIFSWRKVSYLLVGILMGA
                     AFILLTNYLSVTNWIDFAKENLSITFGSNEREVFGMQFLMGASAFLSSIFGYIAKK"
     gene            966..1427
                     /locus_tag="U0290_002712"
     CDS             966..1427
                     /locus_tag="U0290_002712"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302740.1"
                     /translation="MNWTIWDKSQPVPLTLLLDADPSEKQIATYFNKSHVLQLMQADT
                     IIGVVCLFPLNKNQLEIMNIVVSSEYRNQGIGKKLLEKAFDYATHKHFSKIIVKTGNS
                     SIDQLAFYQKNGFRMQHIIPNYFTENYPNQTIIENGIACLDQIILLKEIKS"
     gene            complement(1462..2814)
                     /locus_tag="U0290_002713"
     CDS             complement(1462..2814)
                     /locus_tag="U0290_002713"
                     /EC_number="5.4.2.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoglucosamine mutase"
                     /protein_id="HEM2302741.1"
                     /translation="MGKYFGTDGVRGVANSELTPELAFRLGRMGGYVLTRHVGEHPRV
                     LVARDTRISGEMLESALIAGLVSVGIEVMRLGVISTPGVAYLTKAQGASASVMISASH
                     NPVDDNGIKFFGSDGFKLSDDQEEEIEQLLDTAEDTLPRPSGEGLGTVSDYFEGKQKY
                     IQYLKQTIENDFNGYHIALDCANGATSGLATHLFADLDADISSMGASPNGLNINDGVG
                     STHPEALATFVLDKKADVGLAFDGDGDRVIAIDEIGQIVDGDKIMFICAKYLREQGLL
                     NNNTIVSTVMSNLGFYKGLKELEIEDVQTAVGDRYVVEAMREGNYNLGGEQSGHIIFL
                     DHNTTGDGLLSGIQLINVMKATGKKLSELAAEMKTFPQKLENIRVSDKNHVTDNPKVS
                     KVIGEVEAEMAGNGRVLVRPSGTEPLVRVMVEAATKEETDEYCERISAVVRSEMALND
                     "
     gene            complement(3064..4422)
                     /locus_tag="U0290_002714"
     CDS             complement(3064..4422)
                     /locus_tag="U0290_002714"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465643.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YbbR-like domain-containing protein"
                     /protein_id="HEM2302742.1"
                     /translation="MDRILNNKWSIRIVALLLAAILFTSVNANNNNATTFSTTSSSDS
                     EVIENVPVKVYYDKTNLYISGIPETVTVTLSGPRSIVQSAKAQQDFTVYADLKNASIG
                     TQEVKLQVKDVSDRLKVKVNPATVNVNVQEKVTKKFSVDVELSKSVVADGYQAGTPII
                     DPKKVSITGAKDTIEQIAYVKATLESDGKHKSEFTDKATVSVFDSNLNKLDVEVNPQE
                     VEVTVPVEKVGKSVPVKIKQEGTPESDIEISSMTPDKSEVVVVGDDAVLEKIKEIEIP
                     IDVSKIKADTVKEVTVPVPTGAKSVQPTTIEVKIKTVKKSEANNNQTTSDSNNQDTDT
                     TDKNTDDSGDNDTKISKSFSNMQVYMSGLKNTFDAQMITPANGKVSVTITGEKKTVDG
                     IAAKDLSVIANLSKSKAGSYSIPLELNGLPDNVAYVINPRQADFIITDKEASIEVPSK
                     ST"
     gene            complement(4422..5243)
                     /gene="dacA"
                     /locus_tag="U0290_002715"
     CDS             complement(4422..5243)
                     /gene="dacA"
                     /locus_tag="U0290_002715"
                     /EC_number="2.7.7.85"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465644.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diadenylate cyclase"
                     /protein_id="HEM2302743.1"
                     /translation="MDFSNMSILHYLANIVDILVVWFVIYKVIMLIRGTKAVQLLKGI
                     FIIIAVKLLSGFFGLQTVEWITDQMLTWGFLAIIIIFQPELRRALETLGRGNIFTRYG
                     SRIEREQHHLIESIEKSTQYMAKRRIGALISVARDTGMDDYIETGIPLNAKISSQLLI
                     NIFIPNTPLHDGAVIIKGNEIASAASYLPLSDSPFLSKELGTRHRAALGISEVTDSIT
                     IVVSEETGGISLTKGGELFRDVSEEELHKILLKELVTVTAKKPSIFSKWKGGKSE"
BASE COUNT         1664 a         1127 c          852 g         1780 t
ORIGIN      
        1 taccttaaat agctacacaa atatcgtttt cggcaaaaaa taaaaaaaga atccctctaa
       61 tcttaattag agggattcca ttattttttc gcaatataac caaagatact agatagaaaa
      121 gcagaagctc ccatgaggaa ctgcatacca aacacttctc gttcattact accaaatgta
      181 atagataaat tttctttggc aaaatcaatc caatttgtca cagataaata atttgtcagt
      241 aaaataaagg ctgcacccat taaaatacca actaaaagat acgaaacttt acgccaggaa
      301 aagattacca ctagaagaaa tataacagcc ataaagcatg caaagtaacc atctaatacc
      361 gttgtaaata aataaccttc tttaatatta tccgaatgta attgtctaaa aatagttact
      421 gcagcaaaaa ccgatgtcac tgctccaagg agtgagaaaa cacctgctgc ataacgccat
      481 ttcgttttcc aagcttgatc tgcttgtatt tcttttgctt gaaattttgg tccaataagt
      541 aatgcgatta atactaaaag tcccaaaata cataataaag ttcccgacca ttcaaatggc
      601 tgtgcatact ctaattttga aagaattcgg agctgataat aatacaccga aaacccttgg
      661 aataaaacga aacagataac gccaataata cttgcaaggc gaaaactttc ttttctcata
      721 aaaacaaaac caataataaa aagtcctaca ccaaaaaata atagcatcca ataattccat
      781 acaaaaacaa aactattttc ttctgcatta aaataaccaa taaccgcact aataaaactg
      841 tatagttgcg taataccaag agcgattaac aaactaccgc atattcctct ccatttacta
      901 ggcaattcgc ccacttcctt cctatttatg ccttgccatg ttaccctaag agtgaggtga
      961 taaaaatgaa ctggaccatc tgggacaaaa gccaaccagt cccactcact cttttgttag
     1021 atgccgatcc tagtgaaaaa caaattgcga catacttcaa caaatctcac gtgttgcaat
     1081 taatgcaagc tgatacaatc atcggcgttg tttgtttatt tccactaaat aagaaccaac
     1141 tcgaaataat gaatattgtt gtttcttcag aatacagaaa ccaaggtatt ggcaaaaaat
     1201 tactcgaaaa agcttttgat tatgcaactc ataaacactt ttcaaaaatt atcgttaaaa
     1261 ctggaaattc tagtattgac caacttgcct tttaccaaaa aaatggtttt cggatgcagc
     1321 atattatccc aaattatttt actgaaaatt atcctaatca aacaattatc gaaaacggca
     1381 ttgcttgctt agatcaaatc attctattaa aagaaataaa atcctgatga agtttatcat
     1441 caggattttt tgtttgttgt tttaatcgtt aagtgccatt tctgaacgaa caaccgctga
     1501 aatacgttca caatattcgt ctgtttcttc tttcgtagca gcttctacca tcactcttac
     1561 taatggttct gtaccggatg ggcgaacaag aactcgacca ttaccagcca tttcagcttc
     1621 tacttcaccg attactttac ttactttcgg attatctgtt acatggtttt tatcacttac
     1681 acggatgttt tctagttttt gcgggaatgt tttcatttca gccgcaagct cagataattt
     1741 tttcccagtt gctttcatca cgttgattaa ttggattcct gaaagaagtc catcaccagt
     1801 tgtattatga tctaagaaaa taatatgacc agattgttct ccgccaagat tataattacc
     1861 ttcacgcata gcttctacta cataacggtc acccactgca gtttgtacat cttcaatctc
     1921 aagctctttc aaacctttat agaagcctag attactcata actgttgata caattgtgtt
     1981 gttatttaat aagccttgtt cacgtaaata tttcgcgcag ataaacataa ttttatctcc
     2041 atcgacaatt tgaccaattt cgtctattgc aataacacgg tcgccatcgc catcaaaagc
     2101 taaaccaaca tctgcttttt tatctaaaac aaaggtagct aatgcttctg gatgtgtaga
     2161 tccgacgcca tcattgatat ttaaaccgtt tggagacgct cccatcgaac taatatccgc
     2221 atctaaatct gcaaataaat gcgttgcaag acctgaagtt gcgccattcg cacaatcaag
     2281 tgcaatgtga tatccattaa agtcattttc gattgtttgt ttcaagtatt gaatatattt
     2341 ttgtttgcct tcaaaataat cgctcactgt cccaagacct tctccacttg gtcgaggtag
     2401 cgtatcttct gctgtatcaa gaagctgttc aatttcttct tcctgatcat ctgacaattt
     2461 aaagccgtca gaaccaaaga atttaatacc gttatcatcc actggattat ggctggcgga
     2521 gatcattaca ctagcagaag cgccttgtgc ttttgttaaa taagctacac ctggtgtgga
     2581 gataactcct agacgcatta cttcaatccc tacagaaaca agtcctgcga ttaaagcgga
     2641 ttcaagcatt tctccagata tacgtgtatc acgagctaca agaacacgtg gatgttcccc
     2701 tacgtgacgg gttaaaacat acccacccat tctacctaat ctgaatgcaa gttctggtgt
     2761 taattcagag tttgcaacac ctctaactcc atccgtacca aaatatttac ccatttcatt
     2821 actctccttc taagtcattc attatctaaa tgatttttgt ttgtcatttc atcattactt
     2881 tgtcaaatgc tggttctatc tttgctaatc tcaaccatac atttgttatt ataccttttt
     2941 taagagaaaa tttcatccct ctacaataaa acgttggtat tgcttgcttt tccactattc
     3001 tatgtataaa aagttctttg ccaaaaagga ggagtatgag actagcgccc cacactcctt
     3061 atgttatgtg cttttggaag gtacttcaat agatgcctct ttatccgtaa taatgaaatc
     3121 agcttgtcta ggattaataa cataggcaac attatccggt aagccattca attctagtgg
     3181 aatactgtaa cttcctgctt tgcttttact caaattggca atcacactca agtctttcgc
     3241 cgctattccg tctactgttt tcttctctcc agttatcgtc acagatactt ttccattggc
     3301 aggagttatc atttgtgcat cgaaagtatt tttcaatcca ctcatgtaga cttgcatatt
     3361 agaaaatgac ttagaaattt ttgtatcgtt atctcctgaa tcatcggtgt ttttatccgt
     3421 tgtatctgtg tcttggttat tactatctga agttgtttga ttgttatttg cttcagactt
     3481 ttttacggtc ttaatcttca cctctatcgt cgtcggttgg actgatttgg ctccagttgg
     3541 aaccgggaca gtcacttctt tgacggtatc tgctttgatt ttagaaacat caattggaat
     3601 ttcaatttct ttgatttttt caaggaccgc atcgtcacca actacaacta cttctgactt
     3661 atctggtgtc atgctggaaa tttcaatatc actttctggc gtgccttctt gcttaatttt
     3721 cactggaact gacttgccga ctttttcaac tggcacggtc acttccactt cttgcggatt
     3781 tacttcgaca tctagcttgt tcaaattgct atcaaaaaca gagacggtag ccttatcggt
     3841 aaattcggat ttatgtttgc catcactttc gagtgttgct tttacataag caatttgttc
     3901 gatagtatct tttgcaccag taatagagac ttttttagga tcaatgatgg gcgttccagc
     3961 ttgataacca tctgcaacga cagatttgct caattctacg tcaacagaga attttttcgt
     4021 tactttttct tgtacattga cgttgactgt tgctggattc acttttactt ttaggcggtc
     4081 agatacatct ttcacttgta gttttacttc ttgggtccca atggaagcat ttttcaaatc
     4141 tgcataaacg gtaaagtctt gttgagcttt ggcagactga acgatgctac gagggcctga
     4201 aagcgtgact gtaacggttt ctggaatacc cgaaatatat aaattcgttt tatcataata
     4261 tactttgacc gggacattct cgatgacttc tgaatcacta gaagaagtcg ttgaaaaagt
     4321 cgtggcgtta ttattatttg cattaactga tgtaaaaagg atggctgcga gtagtaaggc
     4381 tacaatccga atcgaccatt tgttatttaa aattcgatcc atcattcgct tttgcctcct
     4441 ttccatttag aaaagataga aggtttcttt gcagttactg tgactagttc tttaagaaga
     4501 attttatgta actcttcttc tgacacatca cggaaaagtt ctccaccttt agttagggaa
     4561 attccgccag tctcttcaga aactacaatc gtaatactat ctgtcacttc actaatccca
     4621 agtgcagccc ggtgacgcgt tccaagttct ttggataaga acgggctatc tgaaagtggc
     4681 aagtaacttg ctgccgatgc aatttcgttt cctttaataa taactgctcc atcatgaagc
     4741 ggtgtattcg gaataaaaat attaattaat aattgagaag aaatttttgc atttaacgga
     4801 atccctgttt caatataatc gtccatgcct gtatcgcgcg ccactgaaat cagcgcccca
     4861 attcgacgtt ttgccatata ctgggtagac ttttcgatag actcgattaa atgatgctgt
     4921 tcacgctcta ttcttgatcc ataacgagta aaaatattgc ctcgtccaag cgtttctaaa
     4981 gcacggcgta attccggttg gaagataatt ataattgcaa ggaatcccca agtaagcatc
     5041 tgatccgtaa tccattctac tgtttggaga ccaaaaaatc cgcttaatag tttgactgca
     5101 atgataataa aaatgccttt taataattgt actgcttttg tacctcggat taacatgatc
     5161 actttataaa ttacaaacca tacgacaaga atatctacaa tatttgctag ataatgcaat
     5221 atcgacatat tggaaaaatc catcacttca cctccgtgcc tcttgaaaac catttatgat
     5281 cacatggttc actttcttta ttatagcata agagtgcagg tggaaaaagc aatcgtcccg
     5341 ccaaaaattg gaaagatttg ttaaagaaat cattcagcgc tctttaattt taatttatta
     5401 caaaacaata ccatagattt ttt
//
LOCUS       DASDYO010000157         5376 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.157, whole genome shotgun sequence.
ACCESSION   DASDYO010000157 DASDYO010000000
VERSION     DASDYO010000157.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5376
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.157"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            144..1172
                     /locus_tag="U0290_002716"
     CDS             144..1172
                     /locus_tag="U0290_002716"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464555.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LacI family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2302744.1"
                     /translation="MKLEDIARLANVSKSAVSLALNGKAGVSEETRLHILQIVEENNY
                     VPLRNTNKKMKKKSTIRFIACKSPNLITEQYQNLPFFSELLSYLSAEIASYPYDLVIS
                     TFDATTILEELAEAEKEQPTAGLILLGTNLNAEEINRIQQEYPKIVVLDTHHPHISAN
                     FVSINNFLGGYKAADYLLQLAHTKIGYVMGVPRIKNFDERKSGFFARLEEADISVPEQ
                     HVFHLPAMQIQEEVSVKEAIAELQDLPSALFCENDYMAISMIKMLQSLSIKVPEQVSV
                     LGFDNINESKVITPELTTVHVKKRDIAEQTLALLSKQIKADTNFETRQIQVNTSLIER
                     TSCVPFKK"
     gene            complement(1220..1990)
                     /locus_tag="U0290_002717"
     CDS             complement(1220..1990)
                     /locus_tag="U0290_002717"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464554.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cof-type HAD-IIB family hydrolase"
                     /protein_id="HEM2302745.1"
                     /translation="MSKIVFFDVDGTLVGETKEIPASAKQAIAKLKENGVYVAIATGR
                     GPFMLDEIRKELDINSYICYNGQYVIFEGKEIYAKPLPTESLERLITVASEHEHPIVF
                     SGKDSMRANLPDHDRVTIGMDSIKRDYPKVDANYYKGRDIYQCLLFCDESYDAYYREE
                     FKQYGFLRWHDVSVDVCPADGSKAEGIKQMIKKLGFSMEDTYAFGDGLNDIAMLQAVG
                     TGVAMGNGRDEVKAVADYVTDHVDEDGVYKALEHLKLI"
     gene            2474..2683
                     /locus_tag="U0290_002718"
     CDS             2474..2683
                     /locus_tag="U0290_002718"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464553.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA-dependent RNA polymerase auxiliary subunit
                     epsilon family protein"
                     /protein_id="HEM2302746.1"
                     /translation="MIFKVFYQETLTETPVREKTQSLYVEAESEVKVRQLLKDEPFHI
                     EFVEKISDAHLAYEKENPDFALWEK"
     gene            2690..4357
                     /locus_tag="U0290_002719"
     CDS             2690..4357
                     /locus_tag="U0290_002719"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464552.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribonuclease J"
                     /protein_id="HEM2302747.1"
                     /translation="MKFVKNNETAVFALGGLGEIGKNTYGVQFQDEIILIDAGIKFPE
                     DELLGIDYVIPDYSYLVKNKDKIKGLFITHGHEDHIGGVPYLLRDLNIPIYAGKLASA
                     LIRNKLEEHGLLRQTKIYEYEEDDVFKFRKTSISFFRTTHSIPDTYGIVVKTPSGNIV
                     HTGDFKFDFTPVGEPANLTKMAEIGKEGVLCLLSDSTNAEVPNFTMSERVVGESIKNI
                     FRDVEGRIIFATFASNIYRLQQVVESSIETGRKIAVFGRSMESAMEIGKQLGYIQAPK
                     DTFIDVHQLNKTPAGNVTILCTGSQGEPMAALSRIANGTHRQIQIQPGDTVVFSSSPI
                     PGNTTSVNRTINLLYQAGAEVIHGKVNNIHTSGHGGQQEQKLMLRLMKPKFFMPIHGE
                     FRMQKIHAESAEECGVPEENSFIMANGDVLALTSETAHVAGKIHAASVYIDGSGIGDI
                     GNIVLRDRRILSEEGLVIVVVSIDMKNSRVMAGPDIISRGFIYMRESGNLIGEAQGLL
                     TRHLNKVMEQKTTQWSEIKNEITDTLQPFLYEKTKRRPMILPIIMEV"
     gene            4466..>5376
                     /locus_tag="U0290_002720"
     CDS             4466..>5376
                     /locus_tag="U0290_002720"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464551.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LCP family protein"
                     /protein_id="HEM2302748.1"
                     /translation="MTETRAEKKKKTTSTFTKVMKIASVALLGIIFFSITGLAAKYYI
                     TVQNTFSKINVPLESSNKTLSDLEKKKPFSVLLMGSDARPGEKNGRADTIILATANKQ
                     QNAVEMVSIPRDTKVDYGNGDIGKINASYSNGGPSGTVSAVEKLMPGVPVDYFISINM
                     EGFKDLVDAVGGITVYNDIDLTEVNSKFVKGNITLNGTEALQYVRIRHEDPRGDFGRQ
                     DRQRDVIIGIANKVISSSGVSNFESIMKAVGDNFQTNMTLTDITSMAANYSSVLKNVD
                     SQELKGEGEMIYSESYGFDLYYFAPDKT"
BASE COUNT         1808 a         1007 c          938 g         1623 t
ORIGIN      
        1 attttatata ttgttttagt ttattttata taaaagaact aaacgagagg tttagaagac
       61 tgaaggtatg ctattttttg ttttgattta ctaaacatga tatactaaat aagataaatt
      121 tagtaaacaa ggagaaatga ataatgaagc tggaagatat tgcacgatta gcaaacgttt
      181 cgaaatcggc cgtttccctt gcgctgaatg gaaaagctgg cgtaagtgaa gaaacccgtt
      241 tacatattct gcaaattgtc gaggaaaata attacgtccc gttacgtaat accaataaaa
      301 aaatgaaaaa gaaatcaacc attcgtttta tcgcatgcaa aagtcctaac ttgattaccg
      361 aacaatatca gaacttacct tttttcagtg agctacttag ctatttatct gctgaaatcg
      421 ctagttaccc atatgatttg gttatctcta ccttcgatgc aacaaccata ttagaagaac
      481 ttgctgaagc agaaaaagag caaccaacag caggcctgat tttacttggc actaatttaa
      541 acgctgaaga aattaaccga atacaacagg aatatcctaa aatcgttgtc ttagatacac
      601 accatccaca tatctcagcc aactttgtct ctattaataa ttttctcggt ggatataaag
      661 cagctgacta ccttttacaa ctagcacata caaaaattgg ttatgtgatg ggggtaccac
      721 gcattaaaaa ttttgatgag cggaaaagtg gcttttttgc tcgtttagaa gaagccgata
      781 tttcagtccc tgaacaacat gtctttcatt taccagcaat gcaaatccaa gaggaagttt
      841 cggtaaaaga agccattgct gaattgcaag atttaccctc tgctcttttt tgcgaaaatg
      901 attacatggc tattagcatg attaaaatgc tacaaagtct atctatcaaa gtccctgaac
      961 aagtttccgt attaggtttt gacaatatta atgaaagtaa agtaattaca ccagaactaa
     1021 ccactgttca tgttaaaaaa cgtgatattg ctgaacaaac acttgccctt ttgtccaaac
     1081 aaattaaagc tgatacgaat tttgaaacca gacaaatcca agtgaataca agcttaatcg
     1141 aaagaactag ctgtgttccg ttcaaaaaat aaccaaaaaa gcctgtgctc tatttttgag
     1201 cacaggcttt tttgatattt taaattaatt ttaaatgttc taaagcttta taaaccccat
     1261 cttcatccac atgatccgta acatagtcag cgaccgcttt tacctcatca cggccgttgc
     1321 ccattgccac gccagttcca acagcttgaa gcattgcaat atcgttcaaa ccatcgccaa
     1381 atgcgtaagt atcttccatc gagaagccaa gttttttgat catttgttta atgccttccg
     1441 ccttcgaacc gtcagctgga caaacatcca cggaaacatc atgccagcgc aagaaaccat
     1501 actgcttaaa ttcttctcgg taataagcat catacgactc atcacagaaa agtaaacact
     1561 gataaatgtc acgaccttta taataattag catccacttt aggataatct cttttaatag
     1621 aatccattcc gattgtcacc cggtcgtgat ccggtaaatt cgcgcgcatg gaatcttttc
     1681 ctgaaaaaac aattggatgc tcatgctccg atgcaaccgt gattaatcgt tctaaagatt
     1741 ctgttggtaa tggtttagcg tatatttctt ttccttcaaa aataacatat tgaccgttgt
     1801 agcaaatata agaattaata tctaattctt ttctgatttc atcaagcata aatggaccac
     1861 gaccagttgc aatagccaca taaacgccat tttctttcaa tttagcaatc gcttgcttcg
     1921 ctgatgctgg aatttctttc gtttctccta caagtgtccc atctacatca aaaaatacaa
     1981 ttttactcat tgattaaacg cctctatcct ctatccattt ttaaatcatt atgtttaaat
     2041 tatagcagaa aatctccttg ataacagggt tgacaaaatt aattatactt tctagtagca
     2101 attatctgga tttatggtat attagaatga aggatataga tcggatgaac atttgtagaa
     2161 cgacaatgga acgtgaaaaa aaacttataa ttacatcttt tactcggaaa tttgtttcaa
     2221 attcccaaaa taaaggtatg caattataac ggataagaaa tttaacatac gtgcacagct
     2281 atttttatac attagtctgt ggtaattttt ctttgtcttt tttatgcctg attgtcagta
     2341 tctcgtgcac ccatatccgc ttgctactaa gtccacaact gaaagcaagc caattattac
     2401 tgaataatta ttaggttttc gaccagagaa tctattttta aaaactaaac ttaaaattta
     2461 aggagagaaa aacatgattt ttaaagtatt ttatcaagaa acactgacag aaacacccgt
     2521 acgcgaaaaa acacaatctt tatacgtaga agcggaaagc gaagtaaaag tacgccaact
     2581 tttaaaagat gaacctttcc acatcgaatt tgtcgaaaaa attagtgacg cgcacttagc
     2641 ttatgaaaag gaaaacccag acttcgcgct ctgggaaaaa taagcctata tgaaatttgt
     2701 taaaaataat gagacagctg ttttcgccct tggtggacta ggcgaaatcg gtaaaaacac
     2761 atatggcgta caatttcaag acgaaattat tctaattgat gcaggaatca agttcccgga
     2821 agacgaactt cttggtattg attatgttat tcctgactac agttacctag ttaaaaacaa
     2881 agataagatt aaagggcttt ttatcaccca tggtcatgaa gatcatatcg gtggcgttcc
     2941 ttacctactt cgcgatctta atatcccaat ttacgctggg aaacttgcga gtgcacttat
     3001 ccgcaacaaa ttagaagaac atggcttgct tcgtcaaacc aaaatttatg aatatgaaga
     3061 agatgacgtt tttaaattca gaaaaacaag tatctctttc ttccgtacaa cccatagtat
     3121 tcctgatacg tatggtattg ttgtcaaaac tccatctggt aacatcgttc atactggtga
     3181 cttcaagttt gattttactc cagttggcga accagcaaac ctaacaaaaa tggctgaaat
     3241 cggtaaagaa ggcgttcttt gtttactatc tgatagtaca aatgcggaag taccaaattt
     3301 caccatgagt gagcgtgtcg ttggcgaaag tattaaaaat attttccgcg atgtagaagg
     3361 acgaattatt ttcgctacct tcgcatctaa tatttaccgt ttacaacaag tagttgaatc
     3421 ctctatcgaa actggccgta aaatcgctgt tttcggtcgt agtatggaat ctgctatgga
     3481 aatcggtaaa caattaggct atattcaagc gccaaaagat acatttattg atgtgcatca
     3541 acttaataaa acacccgctg gaaatgtgac tatcctttgt acagggagtc aaggtgaacc
     3601 aatggctgct ctttctagaa ttgctaatgg tacgcaccgc caaatccaaa ttcaaccagg
     3661 tgacacggta gtcttctcgt cttccccaat ccctggtaat acaacgagtg taaaccgcac
     3721 aatcaattta ctatatcaag ctggtgcaga agttatccat ggtaaagtaa ataatatcca
     3781 tacttctggt cacggtggtc aacaagaaca aaaactaatg cttcgtttga tgaaacctaa
     3841 attctttatg ccaattcatg gtgaattcag aatgcaaaaa atccatgcag agtctgctga
     3901 agaatgtggt gttccagaag aaaatagctt tattatggca aatggagatg tactcgcatt
     3961 aacaagtgaa acagctcatg ttgctggtaa aatccatgca gcaagcgtat atattgatgg
     4021 tagcggtatt ggcgatatcg gtaatattgt ccttcgcgat cgtcgtattc tttctgaaga
     4081 aggcctcgta attgttgttg tatccattga tatgaaaaat tctcgtgtga tggcaggacc
     4141 tgatattatt tcacgcggct tcatttatat gcgtgaatcc ggtaatctca tcggagaagc
     4201 acaaggcctc ctaacgcgac acttaaataa agtaatggaa caaaaaacaa cgcaatggtc
     4261 tgaaatcaaa aatgaaatta cagatacttt gcaacctttc ttgtacgaaa aaacaaaacg
     4321 tcgtccaatg attttaccaa taatcatgga agtatagttt tcaagacgat aaatggtttc
     4381 aaaatcattt atcgtttttt tgttgatttc tcagaaagac gatggtatgt ttaaacaaac
     4441 aaaatagaaa gacgaggaaa attttatgac agaaactagg gctgaaaaaa agaaaaaaac
     4501 aacgtccact tttactaaag ttatgaaaat tgctagtgtt gctcttttag gaattatctt
     4561 cttctctata acaggattgg cagcgaagta ttacatcacc gttcaaaata ccttttcaaa
     4621 aataaatgtc cctctagaat caagtaataa aactttaagt gatttagaaa agaaaaaacc
     4681 tttctcagtg ttactcatgg gttcagatgc ccgacctggt gaaaaaaatg gtcgcgcaga
     4741 tacaattatt cttgccacag ctaataaaca acaaaatgcc gtagaaatgg ttagtattcc
     4801 tcgtgataca aaagtagact acggaaatgg tgacattggt aagattaatg cctcttactc
     4861 caacggtggc ccctcaggaa cagtttcagc ggtcgaaaaa cttatgccag gagttcccgt
     4921 agattatttc atttcaatca atatggaggg ctttaaagac ctagttgatg cagttggtgg
     4981 tattactgtt tataacgata tcgacttaac agaagtaaat agcaaatttg ttaaaggtaa
     5041 cattacttta aacggaacag aagctttaca atatgttcgt attcgtcatg aagatcctcg
     5101 tggtgacttt ggtcgtcaag atagacagcg cgatgtcatt attggtattg cgaataaggt
     5161 tatcagttct tccggagttt ccaattttga aagcattatg aaagccgttg gcgataattt
     5221 ccaaactaat atgactctta cagatattac atctatggct gcaaattatt cttccgtact
     5281 taaaaacgtc gattcccaag aacttaaagg cgaaggggaa atgatttata gcgagtctta
     5341 tggatttgat ttatattact tcgcccctga taaaac
//
LOCUS       DASDYO010000158         5286 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.158, whole genome shotgun sequence.
ACCESSION   DASDYO010000158 DASDYO010000000
VERSION     DASDYO010000158.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5286)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5286)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5286
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.158"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            291..1409
                     /locus_tag="U0290_002721"
     CDS             291..1409
                     /locus_tag="U0290_002721"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302749.1"
                     /translation="MKKLLYQKVYDQLKLSIQEGKIPVGSKMPAENELMAQFDVSSIT
                     LKKALELLKKDGYISRRPRVGTFVLNASPVSEQIETRMFDKPLFGCIMTNFDDTFGTT
                     LLSGMLEHSDSKAHIIVKKSLGDTEREEEILQEFIEMNVAGILILPASSKFVSPTLLE
                     LASQKFPLVVIDRTLEGLPISSISSDNTEAGRIITEKLFELGHKHIGMITSTSPVSTL
                     DSRVNGFIRGHASFHTAFHSDYVFREIESVMPNSTVSIQTDIDKIAHFLNTHSEITAL
                     VATEYNIALLIKQACNKLGKSIPGDLSVVSFDHPDNFFDNSAFQFTHIKQAQYEIGVK
                     AVDMLLNQVLKPDTINKETLPPMLIEGDSVKMLKSTSK"
     gene            complement(1421..2449)
                     /locus_tag="U0290_002722"
     CDS             complement(1421..2449)
                     /locus_tag="U0290_002722"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase"
                     /protein_id="HEM2302750.1"
                     /translation="MKWSEYANLAQLSLEKFYLADTKEQFLNNFYPTENPEEDNKVFN
                     YWWLAHLVEVRLDAYLRTKKQADLEIAENTYLHNKNRNGGTLIHDFYDDMLWNALAAY
                     RLYKETGKPIYLEDAQLVWQDLVDTGWNNIMGGGFAWRRPQMYYKNTPVNAPFIILSC
                     WLYNEFNETKYLEWAMKTYEWQTKVLVREDGFVEDGINRLEDGAIDYEWKFTYNQGVY
                     IGANLELYRITKDAKYLDTANKTADISLKELTEDGIFKDEGSGGDEGLFKGIFYRYFT
                     DLMEETANKTYRNFVFNSCQVLVDNAKLDGYLLMGMNWKENPSGKIPYSAELSGMIAL
                     EMAAKLER"
     gene            complement(2453..3706)
                     /locus_tag="U0290_002723"
     CDS             complement(2453..3706)
                     /locus_tag="U0290_002723"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2302751.1"
                     /translation="MKKVLLAILSMVLLLSLAACGGSSDSSKDKDGKEEIVMWGSWSG
                     DQIKQLEKQIDSYNKSQDKYKVKYVMQENVEEKLLTGIAGGELPDIIMWDRYQTALYA
                     PKGVLEPLDKLVKEDNVKMDDFYEESVKEMTYSDKLYGLPLLNDNRILFYNKKLLQEA
                     GVKPPTTWDELATAAQKTTKWDGNKMTQAGMSLQDVGLFNLYLMQAGGELVTSDNKET
                     AFNSEQGLEVLNYWDKMQNDLKVYQRGFDDGSDAFAAGKEAMTYNGPWALADYNKVED
                     LDYGVVEPPKGPNGDKGAIMGGFGLVMPKQAEHKDGAWDFMKWWTTKPENGVEFAKIS
                     GWLPANKIAAEDEYFTKDPNYSVFVNTMKYAEIRPTVAGYADVEGLAMKPQFEKFMNG
                     NISAEKALSQAEKEGNQILKEERDK"
     gene            complement(3728..4603)
                     /locus_tag="U0290_002724"
     CDS             complement(3728..4603)
                     /locus_tag="U0290_002724"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="carbohydrate ABC transporter permease"
                     /protein_id="HEM2302752.1"
                     /translation="MNTIKLKKGSKSFIWYIAVLLISLVTVFPLIWTVSTSFKPTSEI
                     LSNSMNLIPKMFTWDNYKDVFSTTPFARYLVNSLILAVGGVLTNLFFGSLAGYAFAKL
                     PFKGKKGLFMTFLGSMMIPAVVTMIPSFLVLKNFPLMGGNDITGHGGMGFINTYWAIL
                     IPGAAGAFSIFFMKQFFETLPDELSEAARIDGCSEFKIFWKIYMPLAKTALATLGIMT
                     FQAGWNQFMWPLIVLNSQKMMTVQVGLASFQYNESANYGALMAGTIVSTIPVLFVFIF
                     AQKYFVEGIAHNGGK"
     gene            complement(4615..>5286)
                     /locus_tag="U0290_002725"
     CDS             complement(4615..>5286)
                     /locus_tag="U0290_002725"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464293.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar ABC transporter permease"
                     /protein_id="HEM2302753.1"
                     /translation="LKNTIIYTALFVPLGLAASLGAAILINMNKKGAGLFRTFFYVPV
                     LCSTVATATIWYWLLNPQYGLINRVLGWFGINGPAWLYDSNWAMFAIVMMSVWMTFGT
                     NMMIFLAGLQGIPANLYEASKIEGASRWKTFRYVTWPSLSRTTFLVTTMLIINAFQVF
                     DQAYVLTKGGPGNSTITLVYYIYNEGFGGLKMGYASAISFVLFLIILVFSIINMRVNK
                     EDRTA"
BASE COUNT         1672 a         1058 c          790 g         1766 t
ORIGIN      
        1 atcaaatcag caattagtaa caatagtagc aagaaaaaaa atgctcgcca aaatcctttc
       61 aaaaagctat gtattaaatt ccagttccct aattttttaa aataaaaatc atttaatttt
      121 ttgatggcca tttctacacc ttttcctttt ttcctaaatt caagtttacc atgagtcacc
      181 tatttattaa agtttgtaaa gagattttca cttttttatc gtaattagtt tacaataagg
      241 tcaaaattaa atataattaa tattataaaa tatatttaat gggtgagtga atgaaaaaac
      301 tactatatca aaaagtctat gatcagctta aactgtcgat tcaagaaggt aagattcctg
      361 ttggcagcaa aatgcctgca gaaaatgaat tgatggctca atttgatgtg agcagtatta
      421 cgttaaaaaa ggcgctagaa ttattaaaga aagatggtta tatttcaaga cgccctcggg
      481 ttggtacttt tgtacttaat gcttcgccag ttagcgaaca aatagaaact agaatgtttg
      541 ataaacccct ttttggttgt attatgacaa attttgacga tacttttggt actactttat
      601 tatctgggat gttagagcac agtgactcta aagctcatat tattgtaaaa aaatcacttg
      661 gcgatacaga gcgagaagaa gaaattttgc aagagtttat tgaaatgaat gttgcaggga
      721 tactgatttt acctgctagt tcgaagtttg tttcaccgac cttactagaa cttgcttctc
      781 aaaaatttcc tttagttgtc atagatcgta cattagaagg cttaccaata tcttctatta
      841 gttcagataa tacagaagct ggtcgaatta ttacagaaaa attatttgaa cttgggcata
      901 agcatattgg aatgataaca tctactagtc cagtctctac gcttgatagt cgagtaaacg
      961 gatttattcg agggcatgca tcttttcaca cagcttttca ctctgattat gtttttcgcg
     1021 aaatagaatc agtaatgcca aattcaaccg tttccatcca aacagatatt gataaaattg
     1081 cacatttttt gaatacacat tctgaaatca cggcacttgt agcaactgaa tacaatattg
     1141 ctcttttgat aaaacaagca tgcaacaagt tagggaaatc cattcctggt gatttatccg
     1201 ttgttagttt tgatcatcca gataattttt ttgataactc tgccttccag tttacacata
     1261 ttaaacaagc ccaatacgaa ataggcgtga aagcagttga catgctttta aatcaagtgc
     1321 taaaaccaga tactataaac aaagaaactc tacctccaat gcttatagaa ggagattcgg
     1381 tcaaaatgct aaaaagcacc tccaagtagg aggtgctttt ttatcgttct agttttgccg
     1441 ccatttcaag tgcgatcatt ccacttaatt ctgctgaata aggaattttc ccagagggat
     1501 tttctttcca attcattccc attaacaaat atccatctaa ttttgcatta tcaactagca
     1561 cttggcagct attaaataca aaattccgat aagttttatt tgcggtttct tccattaaat
     1621 cagtaaaata tctgtaaaaa atccctttga atagtccttc atctccgccg ctgccttcat
     1681 ccttaaatat accatcttcc gttaattctt ttaatgatat atctgcagtt ttattcgcag
     1741 tatctaaata ttttgcgtct ttagtaatac gatataattc taaattagct ccaatatata
     1801 caccttggtt ataagtgaat ttccattcat aatcaatggc tccgtcttct aaacgattaa
     1861 tgccatcttc tacaaaacca tcttcacgta caaggacttt agtttgccat tcataggtct
     1921 tcattgccca ctctaaatat ttcgtttcat taaattcatt atatagccaa caagaaagaa
     1981 taatgaacgg tgcatttaca ggcgtgtttt tataatacat ttgtggtcga cgccaagcaa
     2041 agccacctcc cattatgtta ttccaaccag tatccactaa atcctgccaa accaactgtg
     2101 catcttctag ataaattggt tttccagtct ctttatatag acgataagcc gcaagtgcat
     2161 tccaaagcat atcatcataa aaatcatgaa taagcgttcc accatttcta tttttattat
     2221 gcaaatatgt gttttccgct atctccaaat ctgcttgttt ttttgtacgt aagtatgcat
     2281 ctaatcgtac ttccaccaag tgagctagcc accaataatt aaaaacttta ttatcttcct
     2341 caggattttc tgtcggataa aagttattta aaaattgttc ttttgtatcg gcaagataaa
     2401 acttttctaa acttagttga gctaaatttg catattcgga ccatttcatc gtttatttat
     2461 ctctctcttc ttttaaaatt tggtttcctt ctttttcagc ttgtgataaa gctttttcag
     2521 ctgaaatatt accattcatg aatttctcaa attgaggttt cattgctaaa ccttctacgt
     2581 ctgcatagcc tgccacagtt ggacgaattt cagcatattt cattgtattt acaaaaacag
     2641 aataatttgg gtctttcgta aaatattcat cttcagcagc aattttgttt gctggtaacc
     2701 aaccactaat tttggcaaat tctacgccat tttctggttt cgttgtccac cacttcataa
     2761 agtcccatgc gccgtcttta tgttcggctt gtttaggcat tactaatcca aatccgccca
     2821 taatagcgcc tttatcgcca tttggtcctt taggtggttc tactacacca taatcaaggt
     2881 cttctacttt attataatct gctaaagccc acggaccgtt gtatgtcatt gcttcttttc
     2941 cggctgcaaa agcatcggag ccatcatcaa aaccgcgttg gtacactttt aaatcatttt
     3001 gcattttatc ccaataattt agtacttcta agccttgttc tgaattgaat gccgtttctt
     3061 tattgtcaga agttactagt tcgccacctg cttgcattaa atacaagtta aacaagccaa
     3121 catcttgaag tgacattcct gcctgcgtca ttttatttcc atcccatttc gttgtttttt
     3181 gcgcagcagt tgctaattca tcccacgtag ttggtggttt tacgccagct tcttgtaata
     3241 attttttatt gtaaaacaga attcgattat cattcaataa cggtaaacca tataatttat
     3301 cactataggt catttctttc actgattctt cataaaaatc atccatcttc acgttgtctt
     3361 ctttgacaag tttatctagc ggttcaagca ctccttttgg tgcataaaga gctgtttgat
     3421 agcgatccca cataataata tcagggagtt cgccacctgc aattcctgtt aataattttt
     3481 cttctacatt ttcttgcatt acatatttta ctttatattt atcttgtgac ttattatagc
     3541 tatcgatttg tttttctaac tgtttaattt gatctcctga ccaagagccc cacataacaa
     3601 tttcttcttt tccgtcctta tccttactac tgtctgaact tccaccacaa gccgctaaac
     3661 tgagcaacaa caccatacta agaattgcta acaatacttt tttcatccta tacactcctt
     3721 ttttggttta tttaccgcca ttatgcgcga taccttctac aaaatatttt tgtgcaaaaa
     3781 taaatacaaa taatactgga atggtagaaa caattgtccc agccattaaa gccccataat
     3841 tggcgctctc attatattga aaagaagcaa gtcctacttg aactgtcatc attttttgtg
     3901 aattaagaac aattaatggc cacatgaact ggttccagcc agcctggaat gtcattattc
     3961 caagagtagc taatgcagtt ttagcaagcg gcatatagat tttccaaaag attttaaact
     4021 ccgaacaacc gtctattctt gcagcttcag aaagttcatc tggtaacgtt tcaaaaaact
     4081 gtttcatgaa aaagatcgaa aatgccccag cggctcctgg aatcaaaatt gcccagtaag
     4141 tatttataaa acccatacca ccatgaccag taatatcatt accgcccatc aacgggaaat
     4201 tctttaatac taagaaagat ggaatcattg ttactactgc tggaatcatc atgcttccta
     4261 aaaatgtcat aaaaagacct tttttccctt taaaaggtag cttagcaaaa gcataacctg
     4321 ctaatgaccc gaagaataaa ttagtgagca caccaccaac tgcaagtatt aaagagttga
     4381 ctaggtagcg ggcaaatggg gttgtactaa aaacatcttt gtaattatcc caagtaaaca
     4441 ttttaggaat taaattcata ctattactta aaatttcact tgttggttta aaggaagtag
     4501 atactgtcca aataagtgga aaaacagtca ctaaactaat tagaagtaca gcaatatacc
     4561 aaatgaacga cttgctccct ttttttaatt ttatggtatt catatcaacc ctccttaagc
     4621 tgtcctatct tctttattta cacgcatatt gataatcgaa aatactagta tgattaaaaa
     4681 taacacaaaa gaaattgcgg aagcatagcc catttttaat cctccgaatc cttcattgta
     4741 aatgtagtag acaagcgtaa tagttgagtt tcctggaccg ccttttgtta aaacatatgc
     4801 ttgatcgaac acctgaaaag cgttgataat tagcattgtt gttacgagga aagtggtccg
     4861 tgaaagggat ggccaagtga cataacgaaa tgtcttccat cttgaagctc cttctatttt
     4921 agaagcttca tataagttag ccgggatacc ctgaagaccg gcaagaaaaa tcatcatatt
     4981 tgttccaaat gtcatccaaa cactcatcat cacaatcgca aacatcgccc agttcgaatc
     5041 atagagccat gctgggccat taattccaaa ccatcctaaa acacgattaa tcaaaccata
     5101 ctgaggatta agcaaccaat accatattgt cgcagttgct accgtagagc ataataccgg
     5161 cacataaaaa aatgtccgaa acaagccagc ccctttttta ttcatattaa tcaagatagc
     5221 agccccaagc gatgctgcaa gaccaagtgg tacaaacaaa gcggtgtata taatagtatt
     5281 ctttaa
//
LOCUS       DASDYO010000159         5268 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.159, whole genome shotgun sequence.
ACCESSION   DASDYO010000159 DASDYO010000000
VERSION     DASDYO010000159.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5268)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5268)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5268
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.159"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            79..1215
                     /locus_tag="U0290_002726"
     CDS             79..1215
                     /locus_tag="U0290_002726"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464434.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM2302754.1"
                     /translation="MKFSRFRDSKLFFWTIEILAVVAILFVLLQMKYIFSPIGIIVST
                     LFMPILVAGFLFYLFNPLVLFLEKRKVPRLLSVILIFIAFITLVVLAVMQLGPTLADQ
                     VAELAKAIPGYWQDFEKWLQDLSNNSALKDLDIKQELEKLNISLPKIMSVVVDGVASS
                     FGAIVSFVSSFVMILVTVPFIVFYMFKDGHKFVESSGRFFPAGIRSEAKQIIKEMNKT
                     ISTYISSQAIDCMFVGLFTFIGYLIIGQPYALLFGFIAGATNIIPYLGPFIGAAPAVI
                     VALFTSPVQALLVIVVVTIVQQIDSNLLSPYIMGKSLSIHPLTIIIILIVAGNLAGIF
                     GMILGVPLYAVVKTIIVNVNRLIKLRRGQLAIDNNLPDPDTPKE"
     gene            complement(1258..1932)
                     /locus_tag="U0290_002727"
     CDS             complement(1258..1932)
                     /locus_tag="U0290_002727"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464433.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="histidine phosphatase family protein"
                     /protein_id="HEM2302755.1"
                     /translation="MGKKLSLYFVRHGQTYLNKNLRMQGWADTPLTPEGIEIVKESGR
                     GLAETEFVAAYSSDLHRTIATAGHLLKENKHAFGLTLEPLSEFRETFFGSYEGEKGDV
                     AWNEIAHHMGYANQEDLFKNADVRETMNGTKAADPTGDAEDFMTFWTRVEQGFLHVIN
                     RHRETGGNVLIVAHGNTIRNIVHELEPSMDEAVILDNASVTVLAYENGLFKLERLNDT
                     SHFKKA"
     gene            complement(1961..3310)
                     /gene="gorA"
                     /locus_tag="U0290_002728"
     CDS             complement(1961..3310)
                     /gene="gorA"
                     /locus_tag="U0290_002728"
                     /EC_number="1.8.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464432.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutathione-disulfide reductase"
                     /protein_id="HEM2302756.1"
                     /translation="MEKHYDYIAIGGGSGGIASINRAAMHGAKCALIEPKFLGGTCVN
                     VGCVPKKVMWYGAQIKEAMDLYADAYGYQVDASFNFQKLVENREAYIERIRGSYKNGL
                     DNNKVEWIKGYAEFVDEKTLRVNGELVTADHILIATGGEPALPSIPGAEFGITSDGFF
                     ALKELPKKVAVVGAGYIAVELAGVLQQLGSETHLFVRKHAPLRNFDPLLTDTLTEIIE
                     QSDMTLHKHAVPQKVEKNPDGSLTLSLEDGRTETVDTLIWAIGRKPVIQGLQIEKAGV
                     KLLESGHIAVDKFQNTNVAGIYAVGDVTGHYELTPVAIAAGRRLSERLFNNKKDAHLN
                     YENIPTVVFSHPAIGTVGLTEPEAIEKYGKENIKVYTSSFTSMYTAITDHREPCRMKL
                     ICEGKTERVIGLHGIGYGVDEMIQGFAVAINMGATKADFDNTVAIHPTGSEEFVTMK"
     gene            complement(3346..3843)
                     /locus_tag="U0290_002729"
     CDS             complement(3346..3843)
                     /locus_tag="U0290_002729"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tyrosine phosphatase family protein"
                     /protein_id="HEM2302757.1"
                     /translation="MANYINKERRQIDFDPFDLRIIAVPEVVAVQFKPRSEHTLLIRI
                     ADVGATYQPLKNESLFEAILPVHFNDINEEDDYWGLSDKEQAEMKLFNEVHRDLIYNF
                     VDEHPDFTQIVVHCHAGVSRSSAVAMAIAEHLRDTDTYEKLQVIKRYLPNPRVLAIMR
                     GEAYL"
     gene            complement(3974..4648)
                     /locus_tag="U0290_002730"
     CDS             complement(3974..4648)
                     /locus_tag="U0290_002730"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464430.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdeI/OmpD-associated family protein"
                     /protein_id="HEM2302758.1"
                     /translation="MAEKTIVEKLQLTKYKEAVILNQPNGADCFQNLANYEEKLADKQ
                     YDLIFDFVETLEELITFVQKVIAENKLAANGYLFFAYPKKGNKKFATYVHRDELMPAL
                     KTDEEGYVDGSTLKFTRMVALDETYTVVGLKEAAKLKAKGVKKNNPSADEYADHVPLV
                     AEFLADKGDLQAFYNNLATGYQRVWARYIYSAKQPATQEKRRLEMVDILSQGYKTKDL
                     YRQGKK"
     gene            complement(4763..5143)
                     /locus_tag="U0290_002731"
     CDS             complement(4763..5143)
                     /locus_tag="U0290_002731"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464429.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEM2302759.1"
                     /translation="MDLVKNGKVLELVHPNGNWTLIKEEGFSPVQITVAAVAACSGYV
                     YQTLLEKKRIEINDLSIHTDYEQDQESAVHVLTKINVTFTVDLVDKSNEAKAEKAVHL
                     VKDACPVAKSLDPSIEINEMVVFK"
BASE COUNT         1389 a         1109 c          945 g         1825 t
ORIGIN      
        1 cagtaattca gtggctattt aaagcagtta atggtactat aaaatttatc aataaggttt
       61 tagaaagaag gggagaattt gaaattttca cgatttcgag atagtaaatt atttttttgg
      121 acaattgaaa ttttagcggt tgtagctatt ttgttcgttc tattgcaaat gaagtacata
      181 ttttcaccaa tcggcatcat agtttctaca ttgtttatgc cgattttggt cgcagggttc
      241 ctattctatt tatttaaccc gctcgtatta tttttagaaa aaagaaaagt acctcgactt
      301 ttgagtgtta ttttaatttt tattgccttt atcacgcttg ttgttcttgc agtaatgcaa
      361 ctcggtccaa cgcttgctga ccaagtagct gaactcgcaa aagcaatacc aggttactgg
      421 caagattttg aaaaatggct gcaagatctc tcgaataatt ctgcactaaa agatttagac
      481 ataaaacaag aacttgagaa gctcaacatt tccttaccaa aaatcatgtc tgtggtcgtt
      541 gacggggtag cttctagttt tggagccatt gtctcctttg tctctagttt tgttatgatt
      601 cttgtaactg taccatttat cgtcttttat atgtttaaag atggtcataa gttcgttgag
      661 tcctctggaa gatttttccc ggcaggtatt cgttctgaag caaaacaaat tattaaagaa
      721 atgaataaaa ccatttctac ttatattagt tcacaagcga ttgattgtat gtttgttggt
      781 ttatttactt tcattggtta tttaattatt ggtcaaccgt atgcgcttct gtttggtttt
      841 attgcaggtg caacgaatat tattccttat cttggaccat tcattggagc agctcccgca
      901 gttatcgtgg cgctatttac ttctccagtc caagcactgc tcgttattgt tgtcgtaacg
      961 attgtgcaac aaattgactc taacttactt tctccatata ttatgggtaa atcactatcg
     1021 attcacccac taactattat cattatcttg attgttgctg gaaacttagc aggaatcttt
     1081 ggaatgattt taggtgttcc actttatgcg gttgtgaaaa caattattgt gaatgttaat
     1141 cgtttaatta aattgcggcg aggtcagctg gcgattgata ataatcttcc tgatccggat
     1201 acaccgaaag aataaaaaaa cgagctttgg gaaactagtt cctaaagctc gttttttcta
     1261 tgctttttta aaatgggaag tgtcatttaa acgttctaat ttgaataagc cgttttcgta
     1321 agctagtacg gtgacactcg cgttatctaa aataaccgct tcgtccatgg atggttcgag
     1381 ttcgtggacg atgttacgaa tagtatttcc gtgagcgacg ataagaacgt taccaccagt
     1441 ttcgcgatga cgattgataa catgcaagaa accttgttct acacgtgtcc agaatgtcat
     1501 gaaatcttcc gcatctcctg ttgggtcagc tgcttttgta ccattcattg tttctcgtac
     1561 atcggcattt ttaaataggt cttcttgatt cgcataaccc atatgatgcg caatttcgtt
     1621 ccaggcaaca tcgccttttt caccttcgta ggagccaaag aaagtttccc gaaattcact
     1681 taatggttct agtgttaaac caaatgcgtg tttattttct tttaataaat gccctgctgt
     1741 tgcaatcgta cggtgtaagt cgcttgaata cgctgcaacg aattctgttt ccgcaagtcc
     1801 gcgaccactt tctttgacta tttcaattcc ttctggtgtt agtggcgtat cagcccatcc
     1861 ttgcatgcgc aagtttttat ttaagtaggt ttgaccatgt cttacaaaat aaagtgataa
     1921 tttttttccc attacgtact tcctcctcca tcgttgtttt ctatttcatt gtaacaaatt
     1981 cttcggatcc tgttgggtga atcgcaaccg tattgtcgaa atcggctttt gttgcgccca
     2041 tattaatcgc aacagcgaat ccttgaatca tctcgtccac accgtaacca atcccgtgca
     2101 agccgatgac acgctctgtt ttcccttcgc aaattaattt cattcggcaa ggttcgcggt
     2161 ggtctgtgat ggctgtatac attgaggtaa agcttgaagt gtacactttg atattttctt
     2221 tgccatattt ttcgattgct tctggttctg ttaaaccgac cgttccaata gctggatggc
     2281 taaatacaac ggttgggata ttttcatagt ttaaatgtgc atcttttttg ttgttgaaaa
     2341 gacgttctga taaacggcgc cccgctgcaa ttgcaactgg agttaattca taatgacccg
     2401 ttacatcgcc aactgcataa atccccgcta cattggtgtt ttggaattta tctacggcga
     2461 tatgtccgct ttctagaagt tttacgcccg ctttttcgat ttgaagacct tggatgacag
     2521 gtttacgtcc gatcgcccaa ataagcgtat caacggtttc tgtgcggcca tcctctaagc
     2581 tcaacgtcaa actgccatct ggattttttt cgactttttg cggaacggcg tgtttatgca
     2641 acgtcatatc cgattgctcg ataatttcgg ttagtgtatc tgttaaaagt ggatcgaaat
     2701 ttcggagtgg cgcatgtttc cgtacaaata aatgcgtttc tgagccaagt tgttgtaata
     2761 caccagctag ttcaaccgca atgtatcccg cgccaacaac cgccactttt ttaggtagtt
     2821 cttttaatgc aaaaaagcca tctgaggtga tgccaaattc tgcgcccgga atggaaggaa
     2881 gcgctggttc gccgcctgtt gcaattaaaa tatgatctgc tgtcactagt tcgccgttta
     2941 cgcgcaatgt tttttcatcg acaaattcgg cataaccttt aatccattct actttattat
     3001 tatccagccc atttttgtaa gaacctcgaa ttcgttcaat gtacgcttct cgattttcga
     3061 ctagtttttg gaagttgaag ctcgcgtcca cttggtaacc atacgcatct gcgtataaat
     3121 ccatcgcttc tttaatttgt gcgccatacc acatgacttt tttcggaaca caaccaacat
     3181 ttacacaagt tccacctaaa aattttggtt caattaatgc acattttgct ccgtgcatgg
     3241 ctgcgcgatt aatcgaagca attccgccac ttccgccgcc aatcgcaata taatcataat
     3301 gcttttccat acaaaatctc tcctaacatt tcttcgtttt cgtttttata aatacgcttc
     3361 gccccgcata atcgcaagaa cccgcggatt tggtaagtat cgttttatca cttgaagttt
     3421 ttcgtacgtg tccgtgtcgc gtaaatgttc cgcaatcgcc atagcaacag cgctacttcg
     3481 gctgacccca gcgtgacaat ggacaacaat ctgcgtaaaa tctgggtgct catccacaaa
     3541 attataaatc aaatcgcgat gtacctcgtt aaatagtttc atctccgctt gctctttgtc
     3601 actaagcccc cagtaatcat cttcttcgtt aatatcatta aagtgaacgg gcaaaatagc
     3661 ttcaaaaagt gattcgtttt tgagtggctg ataggttgcg ccgacatccg caatacgaat
     3721 aagtaaagta tgctctgagc gcggcttaaa ctgcaccgct actacttctg gtacggcaat
     3781 tatccgtaaa tcaaatggat caaaatcaat ttggcgcctt tctttgttaa tataattcgc
     3841 catcctgcat gtcccctttt ccagtgcaac aagattttcc ttcgtcttat tcctcttcta
     3901 ttctatcacg cctagacatt tttacataaa gaagcagttt caaacgcaaa aataaccaaa
     3961 taaaattatt tggttacttt ttcccttgtc ggtaaagatc tttcgtttta taaccttggc
     4021 tcaaaatatc aaccatctct aaacgtcttt tttcttgtgt cgctggttgt ttggcagagt
     4081 aaatatagcg cgcccaaacc cgctggtatc ctgttgctag attgttgtag aaggcttgta
     4141 aatcaccttt gtctgctaga aattcggcga ctagaggtac atggtcggcg tattcatctg
     4201 cggaagggtt atttttctta acgcccttcg cttttagttt tgctgcttct tttagaccaa
     4261 ctaccgtgta cgtttcatcg agcgcgacca ttcgcgtgaa tttgagtgtg ctaccgtcga
     4321 cgtagccttc ttcatcggtt ttaagcgctg gcatgagttc atcgcggtgt acatatgtag
     4381 cgaacttttt attgcctttt ttaggatagg cgaaaaataa ataaccattc gcagcaagtt
     4441 tattttcagc aataactttt tgcacgaacg taattaattc ttctagcgtt tccacaaaat
     4501 cgaaaattaa atcgtattgt ttgtctgcta gtttttcttc gtaatttgct agattttgga
     4561 aacaatccgc tccatttggt tgatttagga taactgcttc tttatattta gtcagttgta
     4621 atttttctac tattgttttc tctgccatat tccagcacct cgtttgtatt gtttggtttc
     4681 agtatatagc cttcccttta agttatcaag ccaaactaaa cagaaaaaag accaaacacc
     4741 acggcttggt ctataaatca ttttatttaa aaacaaccat ctcgttaatt tcaatcgacg
     4801 gatctaaact tttcgcaacc gggcaagcat ctttcactaa atgcaccgct ttttccgctt
     4861 tcgcttcatt gcttttatct actaaatcca ccgtaaaagt aacattaatt ttcgttaaaa
     4921 catgcacagc actttcttga tcttgctcat aatcggtatg aatgcttaaa tcatttatct
     4981 caattcgttt tttctcaagt aatgtttgat agacatatcc gctacaagca gcaaccgcag
     5041 ccactgttat ttgaactgga gaaaaacctt cttctttaat taatgtccag ttgccatttg
     5101 gatgtacaag ttctaacact ttcccatttt tcactaaatc catgattcat tcctccaatt
     5161 taatccttac aattcttata tgaataataa gattatagct caaataaaaa gttctgtcca
     5221 atttcctgta cgaaaaaaag aatccaagtt ttgcttggat tctttttg
//
LOCUS       DASDYO010000160         5207 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.160, whole genome shotgun sequence.
ACCESSION   DASDYO010000160 DASDYO010000000
VERSION     DASDYO010000160.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5207)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5207)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5207
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.160"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            90..1532
                     /locus_tag="U0290_002732"
     CDS             90..1532
                     /locus_tag="U0290_002732"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
                     /protein_id="HEM2302760.1"
                     /translation="MKELLTFPKDFWWGSAWSAEQAEGRGDTGKAKTVWEHWFETEPN
                     RFYEGVGSEITTDHFNRYKEDVQWMKKTGQNSFRISISWARMFPNDGVGEVNPKAIAF
                     YRDLLTEMNENGIKPFANLYHFDMPVALQDAGGWESREVVDAYVHFADTCFKEFGDLV
                     YHWFTFNEPLGPILGGYLEDFHYPNQIDFKRGAQAGFNTILAHALAIKAFKKLNLSSK
                     IGVILNLSPTYPRSQNEYDLEAAEICDAFYTRSFLDPMVKGTFPEKLVEIMREYDQMP
                     EYTEEDLTIIKENTAQILGLNYYEPRRVKARLTAINEKSPFLPDWFFEPHNMPGKRMN
                     IYRGWEIYERGIYDLCIDIRDNYGNIESFISENGMGVANEERFLNEEGQIQDDYRIQF
                     VKDHLAYVHQAIAEGCDIKGYHLWTFIDCWSWINAYKNRYGLVSLDVETGKRTMKKSG
                     EFYKKMSDMNGFEYDTSKLVGTKREETTNG"
     gene            1525..2859
                     /locus_tag="U0290_002733"
     CDS             1525..2859
                     /locus_tag="U0290_002733"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIC"
                     /protein_id="HEM2302761.1"
                     /translation="MAETKKKSIVNGFINVAQRLGGQIHLRSLRDAFASIMPFMILAG
                     FVTLINYVILEPTGFMGKIVNPDTLKTWQEIGISIGNGTLSVITLLVTVAISYHLCLN
                     RGYKNVIAPILVALSSFIVVTPIAMTFLPEGASKSIEVPNVIPVSYTGASGMFVGIIV
                     GLIATDLFIKLSKNKRMQINLTGNIPPAVIKSFNVLIPIMITVIIFSVMSFAVNQVFN
                     MDFNTLVTTIITKPLSYVTTSLPGFLLITSIANLFFGLGIHQAVISGPLLDPFLLQNM
                     QENMVAYANHQEIPHIINMAFKDTFAVMGGSGNTIGLLIAIFIFGKRKDYKDISKLSA
                     APSLFNISEPIIFGLPIVFNPLLIIPFVLAPIFSLTTAYYATAAGWINHVVVQTPWTT
                     PPIISGFLATGGDWRASVLQVIIIVVTVFIYLPFLRMDEKVAFATAQKTEAK"
     gene            2877..3179
                     /locus_tag="U0290_002734"
     CDS             2877..3179
                     /locus_tag="U0290_002734"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463904.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIB"
                     /protein_id="HEM2302762.1"
                     /translation="MKNILLVCNAGMSTSFLVEKMKAAGAEQGVEANIWAVSDAELHE
                     NWEKADVILLGPQVGYLKGNTEKVVGGKIPVEVINMLDYGRVNGAAVLERAIELIG"
     gene            3266..3460
                     /locus_tag="U0290_002735"
     CDS             3266..3460
                     /locus_tag="U0290_002735"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302763.1"
                     /translation="MKYVKSQMKELVKDSVDLQERLQKLMKEMDLEKTFALKALYHSE
                     VADGGPYQTAYQDLDYKYKD"
     gene            complement(3499..4419)
                     /locus_tag="U0290_002736"
     CDS             complement(3499..4419)
                     /locus_tag="U0290_002736"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HEM2302764.1"
                     /translation="MKIERLIGIIMLLLQRELVSASEMATMFEVSKRTIFRDIDTLAM
                     ANIPIYTIAGTKGGIGIMPTYKVDKKLLTADDLTAIIASLDGMEQLLSSAETKKTLQK
                     MKNMLDHSSEPPKSSISLDFSNLSMKNELNAKVESLYLAIKKHQLVELSYIDRTGNQT
                     IRKTEPYHLLFRNRSWYLQGYSLERSDFRTFKMSRIVELKTLEETFEARPFSVKPFGA
                     PPDRPMFLMHEVSLIVDKIAREQIIERFDLVEISQQDDAHFLAKVTLPDHEAGYRFLL
                     QLGTHVTIQNRDDFYDNFVDYLKEIQGKYI"
     gene            4522..4941
                     /locus_tag="U0290_002737"
     CDS             4522..4941
                     /locus_tag="U0290_002737"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463907.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="effector binding domain-containing protein"
                     /protein_id="HEM2302765.1"
                     /translation="MAFEIVELKKETFTGNKVEIPEFDPQKGFGPMSEIKESAYTKFA
                     KNEKDYVGINASLDDLQYYIVASANSENGDTTFDIPAGKYAKFVTSETDRPALDGFIG
                     AAYGEVSQSDTVGIAGSFNLEDLREAEFTLYIPVVSK"
BASE COUNT         1643 a          897 c         1104 g         1563 t
ORIGIN      
        1 taaacaaaag tatatatatt ttaataaaag tattgttttt taaataaatg tatgctatat
       61 ttattttgac aaaagggagg ccataaaaaa tgaaagaatt attaacgttt ccaaaagatt
      121 tttggtgggg atcggcgtgg tctgcggaac aagcagaagg tcgcggcgac actggtaagg
      181 caaaaactgt ttgggagcat tggtttgaaa cagaaccgaa tcgcttttac gaaggcgtag
      241 gttcagaaat tacaacagat cattttaatc gttataaaga agacgtacag tggatgaaga
      301 aaacaggaca aaattcgttc cggatttcga tttcatgggc gcgaatgttt cctaatgatg
      361 gtgttggcga agtgaacccg aaagctattg cgttttatcg cgatttactt actgaaatga
      421 atgaaaacgg tatcaaacca ttcgccaact tatatcattt cgatatgccc gttgcacttc
      481 aagatgctgg tggctgggaa tcaagagaag ttgtagatgc ctatgttcat tttgcggata
      541 cttgttttaa agaattcggc gatttagttt atcactggtt tacgtttaac gaaccactag
      601 gaccgattct tggcggctat ttagaagatt tccattatcc gaatcaaatc gacttcaaac
      661 gcggtgcaca agctggtttt aatacgattt tggcgcatgc gttagctatt aaagcattta
      721 aaaaattaaa cttgtcatca aaaatcggcg ttattttaaa ccttagcccg acgtatccac
      781 gtagccaaaa cgaatacgat ttagaagctg cggaaatttg tgatgctttt tacacgagaa
      841 gcttcttgga tccgatggtt aaaggaactt tcccagaaaa attagttgaa attatgcgcg
      901 aatacgatca aatgccggaa tacacggaag aagatttgac gattattaaa gaaaatacgg
      961 cgcaaattct tggcctaaat tactatgaac caagacgcgt caaagcccgt ttaacagcaa
     1021 ttaatgaaaa aagtccgttt ttaccagatt ggttttttga accgcataat atgccaggta
     1081 aacgaatgaa tatttaccgc ggttgggaaa tttatgaacg tgggatttac gatttatgta
     1141 ttgatattcg tgataattac ggcaatatcg aatcatttat ttctgaaaat ggtatgggtg
     1201 tggcaaatga agagcgtttc ttaaatgaag aaggacaaat tcaagatgat taccggattc
     1261 aatttgtcaa agatcatttg gcttatgtac atcaagcgat tgcagaaggt tgcgatatta
     1321 aagggtatca tctgtggaca ttcattgatt gttggtcgtg gattaacgca tataaaaacc
     1381 gttacggact cgtttcactt gatgtcgaaa ctggcaaacg cacaatgaag aaaagtggcg
     1441 aattttataa aaaaatgagt gacatgaacg gttttgaata tgatacaagc aaactagttg
     1501 ggacgaaaag ggaggaaaca actaatggct gaaacgaaaa agaagtcgat tgttaatgga
     1561 tttattaatg tagcacaacg tcttggtggt cagattcatt tgcgttcatt gcgtgatgct
     1621 tttgcgagta ttatgccgtt catgatttta gctggttttg tcacgctgat taactatgtt
     1681 attttagaac cgactggctt tatgggcaaa attgttaacc cagatacact taaaacatgg
     1741 caagagattg gtatttcaat cggaaatggt acgctgagtg ttattacgct tttagtcact
     1801 gtggcgattt cgtatcattt atgtttgaac cgcggctata aaaacgttat tgctccaatt
     1861 cttgtcgctt tatcttcttt tattgttgta acaccgattg cgatgacgtt ccttccagaa
     1921 ggcgcatcaa aatcaatcga agtaccgaac gttatcccag ttagttatac tggcgcgtca
     1981 ggcatgttcg tcggtattat cgttggttta attgcaaccg atttattcat taaattatcg
     2041 aaaaacaaac gtatgcaaat caatttaaca ggaaatattc caccggcagt tattaaatca
     2101 tttaacgtgt taattccgat tatgattacg gttattattt tctcagttat gtcatttgcc
     2161 gttaatcaag ttttcaacat ggactttaat acacttgtga caacgattat cacgaagcca
     2221 cttagctatg tgacgacaag tcttccaggc ttcttgctga ttacttctat cgctaactta
     2281 ttcttcggtt tgggtattca ccaagcagtt atttctggtc cgttactaga tccattttta
     2341 cttcaaaata tgcaagaaaa catggttgcc tacgcgaatc atcaagaaat tccgcatatt
     2401 attaatatgg ctttcaaaga cacatttgcg gttatgggtg gctcaggaaa cacgattggc
     2461 ttattaattg ccattttcat ctttgggaaa cgaaaagatt acaaagatat ctcgaaacta
     2521 tctgcggcac catcactatt taacatcagt gagccaatca tctttggtct gccgattgtg
     2581 ttcaacccgt tacttattat cccgttcgta ttagcgccga ttttctcttt aacaacagcg
     2641 tattatgcga cagcagcagg ttggattaat catgtagttg tacaaacccc gtggacgaca
     2701 ccgccaatta tttctggttt cctagcaact ggcggggact ggcgcgcgtc cgttttacaa
     2761 gtaattatca ttgttgtgac agtctttatc tatctgccgt tcctacgtat ggatgaaaaa
     2821 gttgcttttg ctacagctca aaaaacagaa gcaaaataag gaaggaagtt taaccaatga
     2881 aaaacatttt attagtatgt aatgctggta tgtccacaag tttcttagta gaaaaaatga
     2941 aagcagcagg cgcggaacaa ggcgttgaag caaatatctg ggctgtatcc gacgctgaac
     3001 tacacgaaaa ctgggaaaaa gcagatgtca ttttgcttgg accacaagtt ggttatttaa
     3061 aagggaacac agaaaaagta gttggcggaa aaattcctgt cgaagtaatt aatatgctag
     3121 actacggccg tgtcaatgga gcggcggtac ttgaaagagc aatcgaatta atcggttaaa
     3181 aaagtaaggg agtgtggctt atagtcgcac tcctttttta tcggggaaga aagtgttata
     3241 atgtgtgaaa aggagcggaa ttattatgaa atatgtaaaa tcacaaatga aagagcttgt
     3301 aaaagatagc gtagacttgc aagaacgcct tcaaaagcta atgaaagaaa tggacttaga
     3361 aaaaactttc gctttaaaag cactttatca ttcagaagta gctgatggtg gaccgtacca
     3421 aacagcttat caagatttgg attataaata taaagattaa catcaaatgg ctctgctaaa
     3481 caattagcag agccattttt agatatattt tccttggatt tcctttaagt agtcaacaaa
     3541 attatcgtaa aagtcatcac ggttttgaat ggttacatgc gttccaagtt ggagcaaaaa
     3601 gcggtaccca gcctcgtgat caggaagcgt cacttttgcc aaaaagtgtg cgtcatcttg
     3661 ctgcgagatt tcgactagat caaagcgctc gatgatttgc tcgcgggcaa ttttatcgac
     3721 aattaagctg acttcatgca tcaaaaacat cggtctgtcg ggtggggcgc caaacggttt
     3781 tacactaaaa gggcgagctt caaaagtttc ttctagcgtt tttagttcaa caatccgcga
     3841 cattttaaat gttcgaaaat cgctgcgttc caaactgtaa ccttgcaaat accaagaacg
     3901 attcctaaac aggaggtgat aaggctcagt tttacgaatg gtttggttgc ccgttcgatc
     3961 aatatagctg agttctacga gttgatgttt tttaatcgct aaatataaac tttcgacttt
     4021 agcgtttaat tcgtttttca tggacaaatt ggagaaatcg agcgaaatgg aacttttagg
     4081 cggttcgctt gaatggtcga gcatgttttt cattttttgg agggttttct tggtttcggc
     4141 ggaagaaagc aactgttcca ttccgtccaa actagcaata atcgcggtta aatcatccgc
     4201 tgtgagaagc tttttatcga ctttgtaggt aggcataata ccaatgccac cctttgttcc
     4261 ggcaattgtg taaatcggga tattcgccat cgcgagtgtg tcaatgtcgc ggaaaatagt
     4321 acgtttggaa acctcgaaca ttgtagccat ttcagaagca ctgactagct cgcgttggag
     4381 aagcagcatg ataattccga tgagtcgctc gattttcatt tttttctcct ttgtttttgg
     4441 aatgatgaca gacagttgtc atcattcgtg tgttatagtt acatcatatc aaagttaagt
     4501 aactttttgg agggaaatat tatggcattt gaaattgttg aattaaaaaa agaaacattt
     4561 actggaaata aagtagaaat ccctgaattt gatccacaaa aaggctttgg cccaatgagc
     4621 gaaattaaag aatcagccta cacaaaattt gcaaaaaacg aaaaagacta cgttggcatt
     4681 aacgcaagtc ttgacgacct acaatattac atcgtagcta gtgcaaacag tgaaaacggc
     4741 gacacaactt tcgacattcc agcaggcaaa tacgcaaaat tcgtaacaag cgaaacagac
     4801 cgcccagctc tagacggctt catcggcgca gcatacggcg aggttagtca aagcgatacg
     4861 gttggcattg cgggatcgtt taatttggag gatcttagag aagctgagtt tacgctttat
     4921 attccggttg ttagtaagta aattgaggag atctctttcg gatgaaaggg gtcttttttt
     4981 atgttaataa ttaaaaaaat caaaaatgca ctaataagtt ctgcatttga gtatgttatt
     5041 gcacagaggt tcacaaaacg ctcacaaaag ggatgtagtt gcgatgctat aatagaagag
     5101 tggaaaacta caaattactg aatgatgatc ttcaccttaa aaataggagt gacgatagat
     5161 tgaaaaaact agattttaac tgcaatgatg ctaattataa tgcagaa
//
LOCUS       DASDYO010000161         5122 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.161, whole genome shotgun sequence.
ACCESSION   DASDYO010000161 DASDYO010000000
VERSION     DASDYO010000161.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5122
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.161"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(60..791)
                     /locus_tag="U0290_002738"
     CDS             complement(60..791)
                     /locus_tag="U0290_002738"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465010.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2302766.1"
                     /translation="MSYEYFPGFYDRLMDSELYDEWLEFTAHFIGDTPKKILDLACGT
                     AEFALRLSFSGHQVTGVDLSKEMVAVAKEKVAAAEINLPIIEQDMSKLALKQTFDVVT
                     CFCDSLNYLETEQALEATIQAVSVHLEPNGLFLFDVHSVFKVDQGFKDYSYGDSDEEI
                     STIWNSFPGEHPHSVEHELTFYILDEDDTYNRVDELHKERTYPIATYENILKKYGFTK
                     IDIYADFSHEKPNNTSERIFFAARK"
     gene            complement(847..1203)
                     /gene="rsfS"
                     /locus_tag="U0290_002739"
     CDS             complement(847..1203)
                     /gene="rsfS"
                     /locus_tag="U0290_002739"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465011.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome silencing factor"
                     /protein_id="HEM2302767.1"
                     /translation="MNSYDTLMLTAKAADDKRAEDILALDMKGLSSFADYFVICHGNS
                     DKQVQAIAREIKEKALENQVDVKRLEGFDAAKWILIDLGDVIIHVFHKEERSYYNLEK
                     LWGDAPLVDVSAAFIS"
     gene            complement(1208..1783)
                     /gene="yqeK"
                     /locus_tag="U0290_002740"
     CDS             complement(1208..1783)
                     /gene="yqeK"
                     /locus_tag="U0290_002740"
                     /EC_number="3.6.1.41"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465012.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bis(5'-nucleosyl)-tetraphosphatase (symmetrical)
                     YqeK"
                     /protein_id="HEM2302768.1"
                     /translation="MERNEMLKKVEAAMPNARFKHTLGVEKAAVELAEHYHMDVEKAR
                     ITALLHDYAKYYDDDKARKIIEDEGYDPRLLSFHRSLWHAPVGAYLAEKEFGITDTEI
                     LEAIRLHTTGSATMSDFDKLIYLADYTEQGRTFPGVYKARRLALKSLNEAMLFALSNT
                     ITHLVKKQQLVFPDTLDAYNYFVNLNLEGDY"
     gene            complement(1770..2336)
                     /locus_tag="U0290_002741"
     CDS             complement(1770..2336)
                     /locus_tag="U0290_002741"
                     /EC_number="2.7.7.18"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465013.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="nicotinate-nucleotide adenylyltransferase"
                     /protein_id="HEM2302769.1"
                     /translation="MKHKVGILGGTFDPPHLAHLRMAEEAKKQLGLEKILFLPNKIPP
                     HKHISGMASNDERVEMLQLMIEGIDSFEIDTRELMRAGKSYTYDTMRDMISEQPDTDF
                     YFIIGGDMVEYLPKWYHIDDLVKMVTFVGVNRPSYQTEVPYDIVKINMPETTISSTEI
                     RNNIENASTFLPEKVWSYIKEHQLYGKK"
     gene            complement(2354..2644)
                     /gene="yhbY"
                     /locus_tag="U0290_002742"
     CDS             complement(2354..2644)
                     /gene="yhbY"
                     /locus_tag="U0290_002742"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465014.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome assembly RNA-binding protein YhbY"
                     /protein_id="HEM2302770.1"
                     /translation="MLTATQKRFLRKEAHNIQPIFQVGKGSVSPNLIIHVKEALEARE
                     LIKISILQNCEEDKQTVAEKISARSGAEIVQVIGRTIILYKTSVNKQQIKLP"
     gene            complement(2644..3465)
                     /gene="aroE"
                     /locus_tag="U0290_002743"
     CDS             complement(2644..3465)
                     /gene="aroE"
                     /locus_tag="U0290_002743"
                     /EC_number="1.1.1.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465015.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="shikimate dehydrogenase"
                     /protein_id="HEM2302771.1"
                     /translation="MEKYVVIGNPIRHSLSPAMQNRIFQELGMNAEYNSVLIEEDAFE
                     TEIKKLMDSGVRGFNITTPFKERILPFLDELEDLAAASGAVNTVLKKEDKWYGFNTDG
                     KGYLEGLEEIRSITEDDSILITGAGGASKAIYLALSTHTDAKITVTNRTTEKAIEMTK
                     DNENHHAVTLEEAEKQLADFTVIIQTTSIGLEASKNKSPISLANVKKGTICSDIIYNP
                     AETAFLKEAKKNGAITQNGLPMFVNQGALAFEIWTGIKPERSLMKEAVLEQLGGN"
     gene            complement(3485..4585)
                     /gene="yqeH"
                     /locus_tag="U0290_002744"
     CDS             complement(3485..4585)
                     /gene="yqeH"
                     /locus_tag="U0290_002744"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465016.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome biogenesis GTPase YqeH"
                     /protein_id="HEM2302772.1"
                     /translation="MTEEIRCIGCGAVIQTEDPDKIGYAPKSSLNNEQVICKRCFRLK
                     HYNEIQDVALTDDDFLRILNQISSKQALIVYVVDIFDFDGSWLPGLPRFAGSNPVLLV
                     GNKEDVLPKSLKRDKLTRWMRTRAKEQGLAATDVVLVSAEKGHGFDTLLEKIEELRNG
                     QDVYVVGCTNVGKSTLINRIIKQASGENNVITTSQFPGTTLDKIEIPLADGNVLVDTP
                     GIINHHQMAHFIDTTTLKAITPKKEVKPAVFQLNEEQTLFLGALARLDYVSGGRKSLV
                     VYVSNNLPIHRTKLEKADALYEKQAGIVLQPPTEEGMETLPKLVPYSFTIKEKADIVF
                     SGLGWVTIPEGGAKVTAWVPEGVSATIRTSLV"
     gene            complement(4582..5103)
                     /locus_tag="U0290_002745"
     CDS             complement(4582..5103)
                     /locus_tag="U0290_002745"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465017.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YqeG family HAD IIIA-type phosphatase"
                     /protein_id="HEM2302773.1"
                     /translation="MLKQFSPDKMLNTPFGITAAQLRKMGKTTILTDLDNTLLAWDQL
                     DATDEVINWFTILKEEGIKVMIFSNNNEERVARVAKAIDVPYLARAKKPLGANFRWAL
                     KEMDATPEETVMIGDQIMTDIFGGNRQKLTTIFVRPVKQTDGMATKLNRMMESVILKR
                     LAKKNQIKWEESL"
BASE COUNT         1424 a         1047 c          875 g         1776 t
ORIGIN      
        1 attccttttt gatagtttaa ggtgaaaatc gcacaaaaaa agaaagtaat aatgaaaaat
       61 tactttcttg ctgcgaaaaa gattctttcg ctcgtattat tgggtttttc atgactaaaa
      121 tcggcataaa tatcaatttt cgtaaaacca tattttttta atatattttc ataagtagcg
      181 attggatagg tgcgttcttt atgcagttcg tccacgcgat tatacgtgtc atcttcatct
      241 aaaatataga aggtaagttc atgttcgaca gaatgcggat gttcgccagg aaatgaattc
      301 caaatcgtcg aaatctcttc atcgctatct ccgtatgaat aatctttaaa cccttgatct
      361 actttaaaga cggaatgtac gtcaaataaa aataagccat ttggttctaa atgcactgat
      421 acagcttgaa tagtagcctc aagagcttgt tctgtttcca aataattaag tgaatcacag
      481 aagcatgtaa ctacatcaaa cgtttgcttt aatgctaact tggacatatc ttgttctata
      541 atcggcaaat tgatttcagc cgctgccact ttttctttag caactgccac catttctttt
      601 gataaatcca caccagtaac ttgatgacca gaaaaactta aacgtagcgc aaattcagct
      661 gttccacaag ccaaatcaag tattttttta ggagtatctc caatgaaatg agccgtgaat
      721 tctagccatt catcataaag ttcggaatcc attaatctat catagaaacc cggaaaatat
      781 tcgtaactca tagtaatttc tccttaaaaa aacagacgag aattccctcg cctgttctgt
      841 tttttattaa gaaataaacg cagcagaaac gtccacgagt ggcgcatctc cccaaagttt
      901 ttctaagtta tagtaagaac gttcttcttt atggaacaca tggataataa catcacctaa
      961 gtcgattaaa atccactttg ccgcatcaaa accttctaaa cgcttcacat ctacttggtt
     1021 ttctaacgct ttttctttaa tttcacgagc gattgcttgc acttgtttgt ctgaattacc
     1081 gtgacagata acaaagtaat ccgcaaagct tgataacccc ttcatgtcta gtgctaaaat
     1141 atcctctgct cttttatcgt ctgctgcctt agcagtcagc attaatgtat cataactgtt
     1201 caaattatta atagtctcct tccaaattta aattaacgaa ataattgtag gcatccagtg
     1261 tatctggaaa aaccaattgt tgctttttga ctaagtgcgt aatcgtattc gataaagcga
     1321 ataacattgc ttcgttaagc gatttaagtg ctaatctgcg tgctttatat acgccgggaa
     1381 atgttcttcc ttgttctgta tagtcagcta agtagataag tttatcgaaa tcagacatcg
     1441 tcgcgcttcc tgtcgtatgc agacgaatcg cttctagtat ttctgtatca gtaataccaa
     1501 attctttttc tgccagatag gcgccaacag gagcgtgcca cagcgaacga tgaaaagaaa
     1561 gtaaacgcgg atcataaccc tcgtcctcga taatttttct cgctttatca tcgtcatagt
     1621 acttagcata atcatgtagc aaagcggtta ttcgtgcttt ttctacatcc atatgataat
     1681 gttctgcaag ttctacagct gctttttcta cgcctaaagt gtgtttaaat cgagcattag
     1741 gcatagctgc ttctactttt tttagcattt catttctttc cataaagttg atgctccttt
     1801 atatatgacc atactttttc tggtaaaaag gtgctcgcgt tctcaatatt atttctaatt
     1861 tccgtagaag aaatcgtcgt ttctggcata ttgattttaa cgatatcata cggaacctcc
     1921 gtctgataac tggggcgatt aaccccaacg aatgtcacca tttttactaa gtcatctata
     1981 tgataccact ttggcaaata ttctaccatg tccccgccga taatgaaata aaaatctgta
     2041 tccggctgtt cgcttatcat atcacgcatt gtgtcatacg tataggactt tcccgcgcgc
     2101 atgagttcac gtgtatcaat ttcaaaggaa tctatacctt ctatcattaa ttgaagcatt
     2161 tctacacgct catcatttga agccatacca ctgatatgtt tatgaggcgg aattttatta
     2221 ggtaaaaaaa gaattttctc aagtcctagt tgcttcttag cctcttctgc catgcggagg
     2281 tgcgctaaat gcggcggatc aaaagtccca cctaagatgc cgactttatg tttcatcgta
     2341 ggttcctccc gatttatggc aacttaattt gttgcttgtt tacagaagtt ttgtacagaa
     2401 taatcgttct gccaatgact tgaacgattt ccgcgcctga acgagcacta attttttctg
     2461 caacggtttg tttatcttct tcgcaatttt gtagaatcga gattttaatt aattctctcg
     2521 cttctagtgc ttcttttacg tggataatta agtttggtga tacgcttcct tttcctactt
     2581 ggaaaatggg ttggatatta tgcgcttctt ttcttaaaaa acgtttttgt gtagctgtta
     2641 acattagttt cctcctaatt gttcgagtac tgcttctttc atcagtgatc gctctggttt
     2701 tatcccagtc catatttcaa aggcaagtgc cccttgatta acaaacatcg gtaagccatt
     2761 ttgggtaata gctccatttt tctttgcttc tttcaaaaag gctgtttcgg ctggattata
     2821 aataatatca gaacaaatcg ttcctttttt tacattagcc agcgaaattg ggcttttgtt
     2881 tttggaagct tctaaaccga tagatgttgt ttgaatgata accgtaaaat cagccagttg
     2941 tttttctgct tcttctagtg tgacggcgtg atgattttca ttatctttcg tcatttctat
     3001 cgctttttcc gttgtacgat tagtaacggt tattttagca tccgtgtgag tggaaagcgc
     3061 taggtaaatt gccttgcttg cgccacccgc accggtaatt aaaatagaat catcttctgt
     3121 aattgagcgg atttcttcta atccttctaa gtagcctttg ccatctgtat taaatccgta
     3181 ccatttgtcc tcttttttta gcacagtatt cactgcgcca gaagctgctg caagatcctc
     3241 taattcatct aaaaatggta aaatacgctc tttaaatggt gttgtaatat taaatccacg
     3301 cactccagaa tccattaatt ttttgatttc tgtttcaaaa gcgtcttctt ctattaaaac
     3361 agagttatac tccgcattca ttccaagttc ttggaaaatc cgattttgca tagctggtga
     3421 taacgagtga cgaataggat ttccgataac aacatatttt tccaaatgat aggcctcctt
     3481 cgttttaaac gagtgatgtc cggatagttg cgctcacgcc ttcaggaacc cacgcagtaa
     3541 ctttcgcgcc gccttctgga attgtcaccc agccgagtcc ggaaaagaca atatccgctt
     3601 tttcttttat tgtaaaagaa tacggaacta gcttaggaag tgtctccatc ccttcttctg
     3661 taggcggttg aagcactatt cctgcttgtt tttcgtataa cgcatccgct ttttctaatt
     3721 ttgtccggtg aattggtaaa ttattagata catagactac taatgatttg cgaccacctg
     3781 aaacataatc taagcgagca agcgccccta aaaatagggt ttgttcttcg tttaattgga
     3841 agacagctgg ttttacttct tttttaggtg taatagcttt taacgttgtt gtatcaatga
     3901 aatgtgccat ttggtgatgg ttaataattc ctggtgtgtc aacaagtaca ttgccatctg
     3961 ctaatgggat ttcgatttta tcaagcgttg ttcctgggaa ttgagaggtt gtaatgacat
     4021 tgttttcccc ggatgcttgt ttaataatac gattgattag cgttgattta ccaacgtttg
     4081 tacaaccgac aacatagaca tcttgtccat ttcgcaattc ttcaattttc tctaaaagag
     4141 tatcaaaacc gtggcctttc tcagcgctaa ctaatacgac atctgtcgcc gccaagcctt
     4201 gctctttggc acgagttctc atccaacgtg tcaacttatc acgttttaat gattttggta
     4261 atacatcttc tttgttcccg acaagtaata ccggattact tcctgcaaaa cgaggaagtc
     4321 caggtaacca actaccatcg aaatcaaaaa tatctactac ataaacaatt aaagcttgtt
     4381 tcgaactaat ttgatttaaa atacgtaaaa aatcatcgtc tgttagggca acatcttgaa
     4441 tttcattgta atgttttaga cgaaaacatc ttttacaaat aacttgctca ttgttcaggg
     4501 atgattttgg agcatagccg attttatcag ggtcttctgt ttgaataacc gcgccacaac
     4561 caatacatct aatttcttct gtcaaagtga ttcctcccac ttaatttggt ttttctttgc
     4621 taatcgtttt aaaataacgc tttccatcat tcgatttaat tttgtcgcca taccatctgt
     4681 ttgttttaca gggcgaacaa aaatagttgt taatttttga cggtttccac cgaatatatc
     4741 tgtcataatt tgatcgccaa tcatcacagt ttcttctggt gttgcatcca tttcttttaa
     4801 tgcccagcgg aaattagcgc ctaagggttt ttttgcccgg gctaaataag gaacatcgat
     4861 tgcttttgcc acacgagcaa ctcgttcttc gttattgtta gaaaaaatca ttactttgat
     4921 tccttcttct ttcaatatag taaaccagtt gataacttca tccgttgcgt ctagttgatc
     4981 ccatgcaagc agcgtattat caagatcagt caaaatagta gtctttccca ttttgcgaag
     5041 ttgtgctgct gtaattccaa atggagtatt caacatttta tctggtgaga attgctttaa
     5101 cacgtattgg cacctcattc tt
//
LOCUS       DASDYO010000162         5099 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.162, whole genome shotgun sequence.
ACCESSION   DASDYO010000162 DASDYO010000000
VERSION     DASDYO010000162.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5099)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5099)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5099
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.162"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..408
                     /locus_tag="U0290_002746"
     CDS             <1..408
                     /locus_tag="U0290_002746"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PRD domain-containing protein"
                     /protein_id="HEM2302774.1"
                     /translation="EYGRLFEIIKETANDVAKTFKLNTISDDEVGYITIYFAKHMEAS
                     PLVKRIIIMCSSGIGTSELLKVKVQKAFPDVEIVDVLSSTRFKNNLQDYQNIDFILTT
                     INAESTKEIPSLLVSAMFTEKDKIMVKKLMESL"
     gene            420..893
                     /locus_tag="U0290_002747"
     CDS             420..893
                     /locus_tag="U0290_002747"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465661.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS sugar transporter subunit IIA"
                     /protein_id="HEM2302775.1"
                     /translation="MDIQDLDISKVISPALVNLDLQATSKLEVIEELTDLLVETGAVA
                     DKDAFIADVLYREEEGKTGLGEGVAIPHGKSASVTSTSIAVGRTKKPVEWESLDDKPV
                     NIIILFAVKNSDATTTHIKLLQKVAILLADDEVIGQFQTVKTKEDLIKLLAKNQD"
     gene            906..1217
                     /locus_tag="U0290_002748"
     CDS             906..1217
                     /locus_tag="U0290_002748"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465660.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIB"
                     /protein_id="HEM2302776.1"
                     /translation="MNIIGIAACTSGIAHTYIAKEKLTKAGTALGHNVHIETQGTIGI
                     EDELSAEQVKNADVVIIAADIKISGKDRFKGKRVVEIPTDLAIKAPKQIINKIDKEIN
                     N"
     gene            1234..2328
                     /locus_tag="U0290_002749"
     CDS             1234..2328
                     /locus_tag="U0290_002749"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465659.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS fructose transporter subunit IIC"
                     /protein_id="HEM2302777.1"
                     /translation="MKKLQIKKHALTAISYMLPLVVASGLLIAIGNLTNGQVIENYKA
                     PYSIPDALVSLGVLGMGLLAPVIAGAIAYSIADRPGIAPGLLMGLIANSIGAGFLGGM
                     LGGYLVGYFVLILVKYLKVPKWAQGLMPMMIIPLISSLVVGLLMYFVVGVPIVWATEA
                     MTSFLQGMQGSMRFVFGAVLGAMAAFDFGGPVNKVASLFADGLLLEGVKEPEAVKILA
                     SMVPPFGVTLSWVVSKLIKKKKYTKSEEDNIKIAFPMGICMITEGVIPIAAVDPIRVI
                     ISCTLGAAVGGGLSMTWGIGSPVPSGGMFIVPAMNEPLLFCLALLIGTCVTAAMLLIL
                     KREPTKEEELIADQGLEEEDEVDLSGIKIS"
     gene            2346..3200
                     /locus_tag="U0290_002750"
     CDS             2346..3200
                     /locus_tag="U0290_002750"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465658.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-bisphosphate aldolase family
                     protein"
                     /protein_id="HEM2302778.1"
                     /translation="MYVSMKGMLERANKEHYAVMAINCFNLETARAVIDAAQELRAPI
                     IIDLLQDHLTSHLGSRFLTKPIIKMAEEASVEVAINLDHGHDVAIVKQCLADGFSSVM
                     MDASSFPYEENVAITKKMVEFAEVYHASVEAEVGNIGAVTGDNYTNQEMYTDPKVAID
                     FAKRTGIDALAISYGSSHGDYPEGFTPAFQFDIVREIKSATNMPLVLHGGSGCGAENI
                     RESVRLGINKINVGSDFMKAQVNQIKTNLKENPAVNYVDLIHETIKAGTKAVKNYIQL
                     SGSTGKSL"
     gene            3217..4116
                     /locus_tag="U0290_002751"
     CDS             3217..4116
                     /locus_tag="U0290_002751"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465657.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ketose-bisphosphate aldolase"
                     /protein_id="HEM2302779.1"
                     /translation="MLVNMKQLLEVAKENKFAVGAFNVADSNFLRVVVEEAEKNNAPA
                     IIAVHPTELDFTKDDFFQYVLARIKNSPVPFVLHLDHGDNMGDVMRAVRCGFSSVMID
                     GSLLPFEENIRVTKEVVDVCHKLGVSVEGELGTIGKTGNSIEGGVSEIIYTKPEEAEE
                     YISRTGVDTLAVAIGTAHGIYPKDKEPKLRLDILKEIKDLVNIPLVLHGGSANPEAEI
                     AAAVEIGIQKVNISSDYKYAFYKKCREILSTTELWDANAIYPDCIDAAKEVVKYKMEL
                     FESIGQVEKYQQAKTTAWRSELI"
     gene            complement(4146..4856)
                     /locus_tag="U0290_002752"
     CDS             complement(4146..4856)
                     /locus_tag="U0290_002752"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003722256.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2302780.1"
                     /translation="MYLKETLDQFASIDNILKLLKKNPSFNKHCIQERLPQKTIITSN
                     KQRKHIYIIEEGFMKLIFDDNKPRDFSYILSKGAFPFLPVYTEDIPEHTMMVALTDIV
                     WWKIDISFFKGMMETEDPRNYLMLHQLAETRRRFYTIAYQEKLTSRESIYYSLSTMIE
                     FGLRISEKIVELPEFLTYQILADHANTSKSYTSKVLGHLREEGILESQRKPWRINDVQ
                     KLQKLIEMNVPLVKIQKN"
BASE COUNT         1678 a          831 c         1085 g         1505 t
ORIGIN      
        1 gagtatggca gactatttga aatcatcaaa gaaactgcaa atgatgtagc aaaaaccttt
       61 aaattaaaca caatttctga tgatgaagtt ggctatatta ccatatattt tgcgaaacac
      121 atggaagcgt ctcctctagt caaacgaatt atcattatgt gttcaagcgg catcgggacg
      181 tcagaacttt taaaagtaaa ggttcaaaaa gcttttccag atgttgaaat agtagacgtt
      241 ttatcatcta caagattcaa aaataacttg caagactatc agaatattga ttttattcta
      301 acaacaatta atgcagaaag tacaaaagaa atcccatcgt tacttgtaag tgcgatgttt
      361 accgagaaag ataaaataat ggtaaaaaaa ctgatggaaa gtttatagga ggcgaattca
      421 tggatatcca agatttagat attagtaaag taataagccc agcacttgta aatttagact
      481 tacaagctac aagtaaatta gaagtcattg aagagttaac agatttactt gttgaaactg
      541 gggcagtagc agacaaagat gcttttatag cagatgtatt atatcgcgaa gaagaaggca
      601 aaacgggact aggagaagga gtcgctattc cacacgggaa gtcggcgagc gttacgagta
      661 catccattgc cgttggaaga actaaaaaac ctgttgagtg ggagtcgctt gatgataaac
      721 cagtaaatat tattattctt ttcgcagtga aaaattcaga tgctacaaca actcatatta
      781 aattacttca aaaagtagca atcttacttg cggacgatga ggtgattggc caatttcaaa
      841 ctgtaaagac aaaagaagat ttaattaagt tgttagccaa aaatcaggat taggaggagt
      901 ttggaatgaa tattattgga atagcagctt gtacatcggg aatcgcacat acgtatattg
      961 ctaaagaaaa actaacaaaa gcagggacag cgcttggtca caacgttcat attgaaacac
     1021 aaggaacaat tggtatcgaa gacgagcttt cagcagaaca agtgaaaaat gccgatgtag
     1081 ttattattgc tgccgatatt aaaattagcg gaaaggatcg ttttaaagga aaacgagttg
     1141 tcgaaattcc aacagaccta gcgattaaag caccaaaaca aattattaat aaaatagaca
     1201 aagaaataaa taactaggga gtgaaccggt atgatgaaaa aactgcaaat caaaaaacat
     1261 gcacttacag cgatttcgta tatgttaccg ttagttgttg cctcggggtt acttattgcc
     1321 attggaaatt taacaaatgg acaagttatt gaaaactaca aagcacctta ttcgattcca
     1381 gatgcacttg tctctctcgg tgtgcttggt atgggactgc ttgctccagt tattgctggt
     1441 gcgattgcct attcgatagc agataggccg ggaattgcgc cagggttact tatgggactt
     1501 atcgccaatt caatcggtgc tggattttta ggcggaatgc ttggaggata cttagtcggt
     1561 tattttgtac ttattcttgt gaaatattta aaagtgccaa aatgggcgca aggtttaatg
     1621 ccaatgatga ttattccgct tattagtagt ttagtcgtcg ggcttctgat gtactttgtt
     1681 gtaggggttc caatcgtttg ggccacggag gcgatgacaa gcttcttaca aggcatgcaa
     1741 ggcagtatgc gctttgtttt cggagctgta cttggagcta tggcagcatt tgactttggt
     1801 ggacctgtaa ataaagtggc ctccttattc gcagatgggc tccttcttga aggcgtcaaa
     1861 gaaccagaag cagtaaaaat tcttgcttcg atggttccgc cattcggggt gaccctttca
     1921 tgggtagttt ccaaattaat taaaaagaaa aaatacacga agtcagaaga agacaatatc
     1981 aaaattgctt tcccgatggg gatttgtatg attacagaag gtgttattcc cattgcagcg
     2041 gttgacccca ttcgcgttat tatttcttgt acacttggtg cggcagtcgg cggaggtctt
     2101 agtatgactt ggggaattgg ctcaccagtt ccatcaggcg gaatgtttat cgtcccagca
     2161 atgaatgaac cactcttatt ctgtttagca ttattaattg gtacttgtgt cacagcagcc
     2221 atgttactca tcttgaaacg agaacctact aaagaagaag aactcattgc tgaccaagga
     2281 ttagaagagg aagatgaagt tgatctgtct ggaattaaaa tttcataagg tgaggagatt
     2341 ttgaaatgta tgtgtccatg aaaggtatgt tagaacgtgc gaacaaggag cattatgcag
     2401 taatggcaat taattgtttt aatctggaaa cggctcgtgc agtcattgat gctgcacaag
     2461 aacttcgtgc gccgattatc attgatttac ttcaagatca tttgacaagt catctaggaa
     2521 gtcgcttttt gacaaaaccc attataaaaa tggcagaaga agcgagtgtt gaagtggcaa
     2581 ttaatttgga tcacgggcat gatgtggcga tagtgaagca atgcttagcg gatggttttt
     2641 ctagtgtgat gatggatgcg tctagttttc cttatgaaga aaacgttgca attacgaaaa
     2701 aaatggtcga gtttgcagaa gtttatcatg ctagtgtcga ggcggaagtt ggtaatattg
     2761 gtgcggtgac tggagataat tacaccaatc aagaaatgta taccgacccc aaagtggcca
     2821 tcgattttgc taaacgaaca gggattgacg ctttagcaat ttcttatggt tcttcccatg
     2881 gtgattatcc agaaggtttt acaccggctt tccagtttga tattgtcaga gaaatcaaat
     2941 ccgcgacaaa catgccgctc gttttgcacg gaggttctgg ttgcggggcg gaaaatattc
     3001 gagaatccgt tcgactgggc atcaataaaa tcaatgttgg ctccgacttc atgaaagcac
     3061 aagtaaatca aataaaaacg aatttaaaag aaaatccggc cgttaactat gtggacttaa
     3121 ttcatgaaac gataaaagcc ggcacaaaag ctgttaaaaa ttatattcaa ctatccggtt
     3181 caaccggaaa atcactttaa aaggagaaat gaaaatatgt tagtaaatat gaaacaatta
     3241 ttagaagtag ctaaggaaaa caaattcgcg gtgggagcat ttaatgttgc agacagtaac
     3301 tttttacggg tggtagtaga agaagctgaa aaaaacaatg ctccagcaat tattgcagtg
     3361 catccaacag aattagattt tacgaaagat gactttttcc aatatgttct tgcaagaatt
     3421 aaaaatagtc ctgttccatt tgttcttcat ttggatcatg gtgacaatat gggagatgtg
     3481 atgcgagcgg tacgttgtgg ttttagttca gtgatgattg atggctcttt gcttcctttt
     3541 gaagaaaata ttcgtgttac aaaggaagtt gttgatgttt gtcataaact gggggtctca
     3601 gttgaaggtg agctcgggac tatcgggaaa accggtaaca gtattgaagg cggcgtcagt
     3661 gagattatct atacaaaacc cgaagaagcg gaagaatata ttagtcgcac gggtgtagat
     3721 acgctagctg ttgcaatcgg gacagcgcac ggaatttatc ctaaagataa ggagccaaaa
     3781 ttacgtctag atatcttaaa agaaataaaa gatttagtga atattccact tgtacttcac
     3841 ggtggttctg caaatccaga agccgaaatt gctgcagctg tcgaaattgg aattcaaaaa
     3901 gtaaatattt ccagcgatta caaatacgcc ttttataaga aatgtcgtga gattctaagt
     3961 acaacagaac tttgggatgc caacgcaatc tacccagact gtattgatgc ggcgaaagaa
     4021 gtggtgaaat ataagatgga actttttgag tctattggtc aagttgaaaa ataccaacaa
     4081 gcaaaaacca cagcttggcg aagtgaacta atctaacaaa aaaaactaag agcgcaagtt
     4141 ggctcttagt ttttttgtat ctttacaagt ggtacattca tctctattaa cttttggagc
     4201 ttctggacat cgttaattcg ccaaggcttt ctttgtgatt ccaaaatgcc ttcttctcgt
     4261 aaatgtccta gaactttaga cgtgtagctt ttagaagtat tagcatgatc agcaagtatt
     4321 tgataagtta aaaattctgg aagttctact attttttcgg agatacgtag gccaaattca
     4381 atcattgtac ttaaagaata ataaatactt tcacgtgaag tcaatttttc ttgataagcg
     4441 atagtgtaaa atcttcttct agtttccgct aattgatgaa gcatgagata atttcgcgga
     4501 tcttccgtct ccatcatccc cttaaagaaa ctgatatcaa ttttccacca tacaatatct
     4561 gtaagagcaa ccatcattgt gtgttcaggt atatcctctg tataaactgg caaaaaggga
     4621 aatgctcctt tagacaaaat ataagaaaaa tcacgcggtt tgttgtcatc aaatattagt
     4681 ttcataaaac cttcttctat tatatagata tgttttcgtt gtttattgga tgtgataatt
     4741 gttttttgtg ggagccgctc ttgaatgcag tgcttattaa aactcggatt tttcttgagc
     4801 agtttaagaa tattatctat cgaagcaaat tgatctaacg tttcttttaa atacatacca
     4861 ttccccccta tgtcattagt ttcccgcaat ataagcgcat aaaacttatt cttctagtag
     4921 aatatttttg cgtaaacata agcggggaag aataaaaaca ggaattaata actttcacaa
     4981 ataatacaaa atatcgcgat aatcattaaa aaatagaggt tattcttcta aaaaggtagt
     5041 tagaaagata ctattttcac taaaatgttg cttgaaattt ttggatagaa aagtagagg
//
LOCUS       DASDYO010000163         5039 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.163, whole genome shotgun sequence.
ACCESSION   DASDYO010000163 DASDYO010000000
VERSION     DASDYO010000163.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 5039)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 5039)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..5039
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.163"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1117
                     /locus_tag="U0290_002753"
     CDS             <1..1117
                     /locus_tag="U0290_002753"
                     /EC_number="2.3.3.10"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464940.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hydroxymethylglutaryl-CoA synthase"
                     /protein_id="HEM2302781.1"
                     /translation="DMVELAEARNIDPNKFTIGIGQDKMAFAPITQDSVTMGANAALQ
                     ILDEEDLKKIDLVILATESGIDESKAGAVYIHRLLGIQPFSRAIEIKEACYGATAGIN
                     LAKDYVAKHPDSKVLVIGSDIARYGLATGGEATQGAGAVAMVIAADPRCITLEDDNVF
                     YTEDIMDFWRPVYSEYACVEGKYSTEQYIHFFQTIWEKYSAKFGKNLEDFAAICFHLP
                     YTKMGKKALDTIIETAPTEVQERLLENYRLSTLYSRNVGNIYTGSLYLSFISLLDNQA
                     DLQAEDKIGFFSYGSGAVGEFFHGVLQPDYKKYIRKDEHAELLANRTKLAIPDYETKF
                     KQQLPKDGSTFEVDPASDPATIVLTGIQEHKRQYIKK"
     gene            complement(1140..1739)
                     /locus_tag="U0290_002754"
     CDS             complement(1140..1739)
                     /locus_tag="U0290_002754"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM2302782.1"
                     /translation="MKRYFIILILPILSIFAAVTMYFSWFQGWLYFYLKHVMATVSHM
                     GYITVGITAILLYFVTVQLVNWKTNKALLVFCYIIYFSILLCLLFGKASDTQGFSSDT
                     FGFVDTFLSGNLRVIIIGNVLAFIPIGFLLKKLGFFTALLSAGMLIFAVEGAQYMLHV
                     GFFDTGDVFLNVCGIMLGYIVIRFLSPRKYKELKVKPTS"
     gene            complement(1809..3053)
                     /locus_tag="U0290_002755"
     CDS             complement(1809..3053)
                     /locus_tag="U0290_002755"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2302783.1"
                     /translation="MAYTKEEKSWIFQDWANSAYSIMITTAILPIYFKGVAASAGIAD
                     STSTAYWGYANSIGTLLISLLAPILGTIADYQFFKKRFFGIFTAIGIGFTFLLVFIPT
                     DAWLLLLGFYVLSLIGFSGANIFYDAFLIDVTTNDRMDRVSSAGYAYGYLGSCIPFII
                     FIIFQATGILPISDVALVNIGFVMTALWWLFFTIPMWKNVHQIHYIPAVKRPVRTSFK
                     RLFHTISHISEHKNIVIFLIAYFFYIDGVDTIFRMATSYGIDLGISQTTLILILLMTQ
                     LVAFPFTLLYGYLAKRFSAKPLIFTAIFVYIIICIYAVFMKSALDFWILAMLVGTSQG
                     GIQALSRSFFGKIIPKKRSNEFYGFYNIFGKFSAIMGPALMGVITQITGKTQYGVASL
                     IVLFLVGGILFVFVKEKNLENL"
     gene            complement(3072..4340)
                     /locus_tag="U0290_002756"
     CDS             complement(3072..4340)
                     /locus_tag="U0290_002756"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkaline phosphatase family protein"
                     /protein_id="HEM2302784.1"
                     /translation="MEKHLFVISLDALGALDLKDTTDLPVLRELIKTGTHIQEVETIY
                     PSLTYPAHTSIITGHYPATHGIINNTKVQPEKDSPDWYWYKKAIQVPTLYDLAKEKGM
                     TTAAFLWPVAAKSGIDYNIAEIFPNRFWLTQMMVSLHASSPLFLIDMDRKFGHLRKGI
                     NQPDLDIFLTASVVDTIKAKRPRLLLTHLVDMDSMRHAHGVDSPEAKAALKRHDERLA
                     AIIQATKEAGIYENTVFAILGDHYQINVTHAIRLNVLFAEQGWMTVVDDKITEWDVYA
                     KSCDGSSYIYTKNNQHNQEIQHLLQNMAEIEEILPKEEIALRGAAPNATFMVEGRAGF
                     YFMDDLDGPVYEKVTDEMLGKPGYYKAVHGYSPKKPDYKTTIIFNGPGIKKGDKISNA
                     HLVDEAPTFAHILDLQFPNTAGSVIEAIFE"
     gene            complement(4404..>5039)
                     /locus_tag="U0290_002757"
     CDS             complement(4404..>5039)
                     /locus_tag="U0290_002757"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM2302785.1"
                     /translation="LTYLTNVGTVLMNVFIALMLSLFFSLGKEHLVSFTNQFSTSKIG
                     FIYEEVKFFGSKFVATFGKVIEAQFIIALVNAILTTIALWILGFPQLMTLSIMVFLLG
                     LIPVAGVIISLVPLTIIGYSIGGVEYIFYILVVVIIIHALESYVLNPKLMSAKTNLPV
                     FYTFIILIFGEHFFGIWGLIVGIPVVMFFLDVLGVTNQEEIEQPKDTISHT"
BASE COUNT         1690 a          951 c          910 g         1488 t
ORIGIN      
        1 tgatatggta gaacttgctg aagctagaaa tattgatcct aacaagttta ctattggtat
       61 tggccaagat aaaatggctt ttgctccgat tacgcaagat tcagtaacaa tgggcgcaaa
      121 tgcagcttta cagattttag atgaagaaga tttgaaaaaa attgatttag ttattttggc
      181 gacagaatca ggaattgatg agtcaaaggc tggcgcggtt tatattcacc gtttgctagg
      241 tattcagccg ttctctcgtg caattgaaat aaaagaagct tgctacggag ccactgcagg
      301 aattaattta gcgaaagatt atgttgcgaa acatcctgat agtaaagtac tggttatcgg
      361 atcggatatt gctcgttacg gcttggcaac tggcggcgaa gcaactcaag gagctggagc
      421 tgttgcgatg gttattgctg ctgatccacg ttgtatcaca cttgaagacg ataatgtgtt
      481 ttatacagaa gatattatgg acttctggcg ccctgtttac tctgagtatg catgtgtaga
      541 aggtaaatat tcgacggagc agtacattca ctttttccaa accatttggg aaaagtattc
      601 agcaaaattt ggcaagaact tagaagattt tgcagctatt tgtttccact taccatatac
      661 aaaaatgggt aaaaaagcgt tagatactat tattgaaaca gctccaactg aggttcaaga
      721 aagattgcta gaaaattatc gtctaagtac gctttatagc cgcaatgtcg gtaatattta
      781 cactggttcc ctctatttaa gctttatttc cttgttagac aatcaagcag atttacaagc
      841 agaggataaa attggcttct ttagttacgg gtctggtgct gttggcgagt tcttccatgg
      901 agtgctacaa cctgactata aaaaatatat ccgtaaagat gaacatgcgg aattgttagc
      961 aaaccgtacg aaacttgcta ttccagatta tgaaacgaaa ttcaaacaac aattacctaa
     1021 agatggttcg acgtttgaag tggatcctgc tagtgaccca gcaaccattg tattaactgg
     1081 tattcaagag cataaacgtc aatatattaa aaaataatca aaaaaccgac taggctaaat
     1141 cagctagtcg gttttacttt gagctcttta tattttcttg gggataaaaa acgaatcaca
     1201 atgtagccaa gcatgatacc acaaacattc aggaatacat ctccggtgtc aaagaatcct
     1261 acatgtagca tgtactgcgc cccttctaca gcgaatatca acattccagc tgatagtaat
     1321 gcggtgaaaa aacctaattt tttgagtaaa aaaccaattg gtataaaggc taatacattt
     1381 cctatgataa tgacgcgtaa attacctgat aaaaatgtat caacaaaccc aaaagtatca
     1441 cttgaaaatc cttgcgtgtc ggaagccttt ccgaataaca aacagagtag aatactgaaa
     1501 taaataatgt agcaaaaaac aagtaatgct ttatttgttt tccagtttac taattgtact
     1561 gtgacaaaat agagtaatat cgccgtgatg ccaaccgtaa tgtagcccat atgactaact
     1621 gtggccatta cgtgctttaa gtaaaaataa agccatccct gaaaccagga aaaatacatc
     1681 gtcactgcag caaatataga aaggattggt aaaataagaa ttataaagta tcttttcatc
     1741 ctggcgtcct ccttttcaaa ggctacctca aggataacat gtgaaaataa ggactttctt
     1801 aaaagggttt aaagattttc taagtttttc tcttttacga acacaaataa aataccgcca
     1861 acgaggaaaa gtacaattaa actagccaca ccgtattgcg tttttccagt aatttgtgtg
     1921 attacaccca taagtgcggg ccccatgatt gctgaaaatt tcccgaaaat attataaaat
     1981 ccgtaaaact cattcgaacg ctttttagga ataatttttc cgaagaatga tctacttaat
     2041 gcttgaatac caccttgcga agttccaact aacatcgcta atatccaaaa atcaagtgca
     2101 gatttcatga aaaccgcata aatacaaata ataatataaa caaaaatcgc ggtaaagata
     2161 agcggttttg cactgaaacg tttggctaag tatccgtata ataaagtgaa cggaaatgca
     2221 acgagttgtg tcattaaaag aattaaaatt aatgtcgtct gagaaatccc aagatcaatc
     2281 ccgtatgatg tcgccatgcg gaaaattgta tcaaccccat ctatgtagaa aaaataagca
     2341 attaaaaaga taacaatatt tttatgttca ctaatgtggc taattgtatg aaacaatctt
     2401 ttaaaactag ttctgactgg acgtttcacc gctggaatat agtgaatttg atgaacgttt
     2461 ttccacatgg gaatcgtgaa aaatagccac caaagcgccg tcatcacaaa accaatattg
     2521 acgagtgcaa catcactgat tggcaagata cctgtcgctt ggaaaataat aaagataata
     2581 aaaggaatac aacttcctaa ataaccatac gcatatccgg cagatgacac tctatccatc
     2641 cggtcgttcg ttgttacatc aattaaaaag gcatcataaa aaatatttgc gccagaaaag
     2701 ccaattaatg agagtacata gaaccccagt aacaatagcc aggcatctgt gggtatgaaa
     2761 actaataaga aagtaaagcc aatcccgatg gcagtaaaaa ttccgaaaaa tcgcttttta
     2821 aaaaattgat aatctgcaat ggttccgagt atcggagcta ataatgaaat aagtaatgtt
     2881 ccaatcgagt tcgcgtatcc ccagtacgcg gtcgatgtac tgtcagcaat cccggcactc
     2941 gctgctaccc ctttaaaata aattggtaaa atcgcagttg ttatcatgat tgagtaggcg
     3001 gaattcgccc aatcttgaaa aatccaactt ttctcctctt ttgtatatgc caagtgtgtt
     3061 tctccccttt tctattcaaa tatcgcttct atgacagagc cagcagtatt tggaaattgt
     3121 aagtccaaaa tgtgtgcaaa tgtaggcgct tcgtcaacta aatgagcatt gctgattttg
     3181 tctccttttt taatgccagg tccattaaaa ataatcgtgg ttttgtaatc tggcttttta
     3241 ggagaataac cgtgaactgc tttatagtaa cctggttttc caagcatttc atcagtgact
     3301 ttctcgtaaa ccggtccatc taaatcatcc ataaaataaa aaccagccct cccttcaacc
     3361 ataaaagtag cattaggagc agcaccacga agtgctattt cttctttcgg caaaatttct
     3421 tctatttcag ccatgttttg aagtaaatgc tggatttctt gattatgttg attgtttttt
     3481 gtgtaaatat aactggaacc gtcacaactt ttagcgtaga catcccattc cgtaatctta
     3541 tcgtccacta cggtcatcca gccctgttcg gcaaaaagga catttaggcg tatggcgtgt
     3601 gttacattaa tttgataatg atcacctaga atagcaaaga cagtattttc ataaattcca
     3661 gcttcttttg tagcttggat aatcgcagct aaccgctcat cgtgtcgttt taaggccgct
     3721 tttgcttcag gggaatctac tccgtgcgca tgtcgcatac tatccatatc aaccaaatgt
     3781 gttaaaagta atcttggcct tttcgcttta attgtatcaa ctacgctagc tgtcaaaaat
     3841 atatctaagt ctggttggtt gattcccttt cgcagatgac caaattttcg gtccatatct
     3901 attaaaaata atggtgagct agcatgtaat gacaccatca tttgcgttaa ccaaaagcga
     3961 tttggaaaaa tttcagcaat attataatca attccacttt ttgctgcaac cggccataaa
     4021 aaagcagcgg tcgtcatccc tttctctttg gctaaatcat aaagtgttgg tacttgaatg
     4081 gcttttttat accaatacca atcaggagaa tctttttcag gttgaacttt tgtgttatta
     4141 ataatcccat gagttgcggg ataatgcccc gtgataatac ttgtgtgcgc tggatatgtc
     4201 agtgatggat aaatggtttc aacttcttgg atgtgagttc ctgtcttaat taattcccgt
     4261 aaaacgggca aatctgtcgt atcttttaaa tcaagtgctc caagtgcgtc taatgaaatc
     4321 acaaaaagat gtttttccat tattttctcc cccttcaaaa aaacagggat tttccagaaa
     4381 atctggaaga acccccgtgt gaattacgta tgactgattg tgtcctttgg ttgttcgatt
     4441 tcttcttgat tcgtaacgcc gagcacatct aagaagaaca tcacaactgg aataccaacg
     4501 attaatcccc aaataccgaa gaaatgctct ccgaaaataa gaataatgaa agtataaaaa
     4561 actggtaaat ttgttttcgc tgacataagt tttggattaa ggacataaga ttcgagtgca
     4621 tggataataa taacaacgac taaaatgtag aaaatgtatt ccacgccgcc gatagaataa
     4681 ccaatgatag ttaacgggac aagagaaata atcacccctg ccactggaat caaaccaagc
     4741 aaaaacacca ttatggataa agtcatcaat tgcgggaaac ctaaaatcca aagtgctatc
     4801 gtcgttaaaa tggcattcac aagcgcaatg ataaattgtg cttcaataac tttaccaaaa
     4861 gtagcaacaa atttggatcc aaagaacttc acttcttcat agataaaacc aattttacta
     4921 gtagaaaatt gattcgtgaa tgaaactaaa tgttcttttc ctagtgagaa aaatagactt
     4981 aacattagtg cgataaagac gttcatcaat acagttccca cattagttaa ataagttaa
//
LOCUS       DASDYO010000164         4950 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.164, whole genome shotgun sequence.
ACCESSION   DASDYO010000164 DASDYO010000000
VERSION     DASDYO010000164.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4950)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4950)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4950
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.164"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            93..3533
                     /locus_tag="U0290_002758"
     CDS             93..3533
                     /locus_tag="U0290_002758"
                     /EC_number="6.4.1.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464597.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="pyruvate carboxylase"
                     /protein_id="HEM2302786.1"
                     /translation="MNRIKKVLVANRGEIAIRVMRACTELKIKTVAIYSQEDTGSFHR
                     YKSDEAYLVGAGKKPIDAYLDIENIIEIAKESGADAIHPGYGFLSENIEFARRCEQEG
                     IIFVGPKSKHLDMFGDKIKAKEQALLADIPVIPGSNGPVAGIKEVEEFGEKNGYPLMI
                     KASLGGGGRGMRVVESKEHVKESFERASSEAKAAFGNDEVYVEKCVMNPKHIEVQILG
                     DTHGNIVHLFERDCSIQRRHQKVVEVAPCNAITSELRNRICDAAVKLMKNVDYINAGT
                     VEFLVEGDDFYFIEVNPRVQVEHTITEMITGIDIVQSQLFIADGYALHDQLVAIPKQE
                     DIHIHGSAIQSRITTEDPLNNFMPDTGRVDTYRSTGGFGVRLDAGNGFQGTVVTPFYD
                     SLLVKLCTWGMTFEQATRKMRRNLIEFRIRGVKTNIPFLLNVVRHPDFASGNYNTSFI
                     DTTPELFKFPHIRDRGTKTLRYIGNVTVNGFPGIKHRDKPVYAEPRLPKIPYGSQISP
                     GTKQILDAKGPEGVVDWVKKQEEVLLTDTTLRDAHQSLLATRVRSKDIFQIADAMAHL
                     LPNMFSFEMWGGATFDVAYRFLNEDPWVRLETLRKQIPNVMFQMLLRGANAVGYKNYP
                     DNVIREFVKQSAQSGVDVFRVFDSLNWIKGMEVSIDAVREAGKIVEAAICYTGDIDDD
                     TRTKYTIDYYKDMAKELVAQGTHILGIKDMAGLLKPQAAYRLIGELKDTVDVPIHLHT
                     HDTSGNGIYTYAAAVSAGVDIVDVASSAMSGATSQPSMTGLYYGLVNGNRQTNLDAQN
                     SQIINHYWEDVRHYYKDFDNALNSPQTEVYIHEMPGGQYTNLQQQAIAVGLGDRWDEV
                     KEMYTVVNQMFGDIVKVTPSSKVVGDLALFMVQNELSEEDVYEKGDTIDFPDSVIEFF
                     MGEIGQPYGGFPEKLQKLVLKGRTPLTDRPGALMEPVNFVEVKAELKEKMGYEPTEKD
                     VISYILYPKVFLDYQEMINKYGDVTVLDTPSFYKGMRLGETIEVELEKGKILLIKLNS
                     IGEPIADGTRVIYFELNGQPREINIQDMNVQSTVIARRKIDTTNPEHVGATMTGSVIQ
                     VVVKKGDSVKKGDPLLITEAMKMETTIQAPFDGEVSSIYVSDGDTIESGDLLIEVNRI
                     "
     gene            3687..4580
                     /locus_tag="U0290_002759"
     CDS             3687..4580
                     /locus_tag="U0290_002759"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738648.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2302787.1"
                     /translation="MKWFKGIAVVLLLAILTACGNTEVKETTKQTEEIKVKDATGETI
                     TLKKAPTKIVSLIPSNTEILFALGLGDEVKGVSAYDDYPKEAQKIEKVTSTSVDTEKI
                     IALKPDLVLGHESMLATEKDAYKILTDAGINVFVVPDATNLKEVEKSIATIGDLTGTE
                     KEATKVTDSMEKQKVAIEKKAKELKTSPKVWIEISPDLYTAGKGTFMNEMLELAGGTN
                     IVTESGFIPYNEEKVVELQPDIILSVYPDAKATIQKRAAWKDIPAVKNDKIYEMDANK
                     LSRPGPRLLEGAADIQAVLEN"
     gene            4862..>4950
                     /locus_tag="U0290_002760"
     CDS             4862..>4950
                     /locus_tag="U0290_002760"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Teichoic acid translocation permease TagG"
                     /protein_id="HEM2302788.1"
                     /translation="MKQVMEVIKEQIKNLPMIFRIARYEDKAT"
BASE COUNT         1724 a          836 c         1036 g         1354 t
ORIGIN      
        1 ggggattatc atataagtgt acataatcat ttcaaccgtt ggaggctatg tataaagtat
       61 agaacagatc agtgttggtt aggaggaaaa aaatgaatcg aattaaaaaa gtattagtag
      121 caaaccgcgg agaaattgct atccgtgtta tgcgtgcgtg tactgaactc aaaatcaaaa
      181 cagtggctat ttattcacaa gaagataccg gaagttttca ccggtataaa tcagatgaag
      241 cttatctggt tggagcaggg aaaaagccta ttgatgcgta tctagatatc gaaaacataa
      301 tagagattgc taaagaatct ggtgcagacg cgattcatcc gggatatggt ttcttgtccg
      361 aaaacattga atttgctcgt cgttgtgagc aagaaggcat tattttcgtt ggtcctaaat
      421 caaaacacct agatatgttt ggtgataaaa tcaaagcaaa agaacaagct ctattagctg
      481 atattccagt aattccggga agtaatggac ccgtggctgg tattaaagaa gtagaagaat
      541 ttggtgagaa aaacggttac ccattaatga ttaaagcttc tcttggaggc ggcggtcgtg
      601 gtatgcgtgt cgtagaatca aaagaacatg tcaaagaaag ctttgaacgt gcatcctcag
      661 aagcaaaagc ggcatttggg aacgatgaag tatacgtaga aaaatgcgtg atgaatccga
      721 aacatatcga agtacaaatt cttggtgaca cccatggcaa catcgttcat ttatttgaac
      781 gtgattgttc tatccaacgt cgtcatcaaa aagtagtaga ggtagcgcca tgtaatgcga
      841 ttacttctga actacgtaac cgtatctgtg atgctgcagt aaaattaatg aaaaatgttg
      901 attacattaa tgctggaaca gttgaatttt tagtggaagg cgatgatttc tactttatcg
      961 aagtaaatcc tcgtgtccaa gtggagcata caattactga aatgattaca gggattgata
     1021 ttgttcaatc acaactattc attgcagatg gttacgcgct tcacgaccaa ctagtagcta
     1081 ttcctaagca agaggatatc catattcacg gttctgctat tcaaagccgt attacaacgg
     1141 aagatccact taataacttt atgccagata ctggtcgagt agatacgtat cgctctacag
     1201 gtgggtttgg agttcggttg gatgctggta acggcttcca aggaacagta gtaacaccat
     1261 tttatgattc cttacttgta aaattatgta cttggggaat gacattcgaa caagcaacgc
     1321 gcaaaatgcg tcgtaactta attgaattcc gtatccgtgg tgtcaaaacg aacattcctt
     1381 tcttattaaa tgttgttcgt catccggatt ttgcaagtgg taattataat acaagcttta
     1441 ttgatacaac accggaacta tttaaattcc cacatattcg cgaccgtggt acaaaaacgt
     1501 tgcgttatat tggtaatgta acggttaatg gtttcccagg aattaagcac cgtgataaac
     1561 ctgtatatgc agaaccacgc ttgccaaaaa ttccgtatgg ttcgcaaatc tctccaggta
     1621 caaaacaaat tttggatgca aaaggtccag aaggcgttgt agactgggtg aaaaaacaag
     1681 aagaagtgct cttaacagac actacacttc gggatgcgca ccaatcttta cttgcaacac
     1741 gtgttcgctc gaaagacatt ttccaaatag cagatgcgat ggctcattta ttaccaaaca
     1801 tgttttcctt tgaaatgtgg ggtggcgcga cttttgacgt ggcatatcgt ttcctaaatg
     1861 aagatccttg ggtgcgccta gagacactta gaaaacaaat tccaaacgtg atgttccaaa
     1921 tgttacttcg cggagctaat gcagttgggt ataaaaacta tcctgacaat gttatccgtg
     1981 aattcgttaa gcaatcagca caatccggtg tggatgtatt ccgcgtgttt gacagcttaa
     2041 actggatcaa aggcatggaa gtgtccattg atgctgttcg tgaagcaggg aagatcgtag
     2101 aggctgctat ctgctataca ggagatatcg atgatgacac aagaacgaaa tataccatag
     2161 attactataa agatatggcg aaagagctcg ttgctcaagg cacgcatatc ctaggaatca
     2221 aagatatggc tgggctttta aaaccacaag cggcataccg tttgattggc gaattaaaag
     2281 atacagtaga tgttccaatc caccttcaca cgcatgacac aagcggcaac ggtatttata
     2341 cttacgcagc agctgtcagt gctggcgttg acattgtgga cgtggcatca agcgcaatga
     2401 gtggggctac aagccaacca agtatgactg gtctttatta cggattagtg aatggtaatc
     2461 gtcaaacgaa tttagacgct caaaattccc aaatcattaa tcattactgg gaagatgttc
     2521 gtcactatta caaagacttt gacaatgcac ttaattcacc tcaaacagaa gtatacattc
     2581 atgaaatgcc aggtggtcaa tatactaacc ttcaacaaca agccattgca gttggacttg
     2641 gcgatcgttg ggacgaagtg aaagaaatgt atacagtggt taatcaaatg tttggtgata
     2701 tcgttaaagt aacaccttct tccaaagttg ttggagactt agcactattt atggttcaaa
     2761 atgaattatc cgaagaagat gtatacgaaa aaggcgatac cattgatttc ccagattccg
     2821 ttatcgaatt ctttatgggg gaaattggtc aaccatacgg cggcttccca gaaaaacttc
     2881 aaaaactagt actcaaagga cgtacaccac ttacagatcg tccaggcgct ttaatggaac
     2941 cagttaactt tgttgaagtc aaagcagaat taaaagaaaa aatgggttat gaaccaactg
     3001 aaaaagatgt catttcctat attttgtatc caaaagtgtt cctagattat caagaaatga
     3061 ttaataaata tggtgatgta acagtccttg atacaccatc attctataaa ggaatgcgtt
     3121 taggggaaac aatcgaagta gaacttgaaa aaggaaaaat ccttttaatc aagctaaatt
     3181 ctattggtga accaattgcg gatggcacac gtgttatcta ttttgaatta aatggacaac
     3241 cacgtgagat taacatccaa gatatgaacg ttcaatccac tgttattgca cgccgtaaga
     3301 ttgatacaac taaccctgaa catgttggag ctacaatgac aggttcagtc attcaagtag
     3361 ttgttaaaaa aggcgactct gtgaaaaaag gtgatccact actaatcaca gaagcaatga
     3421 aaatggaaac aacgattcaa gcgcctttcg atggagaagt tagcagcatt tatgtttctg
     3481 acggcgatac tatcgaatct ggtgatcttt taattgaagt aaacagaatt taaaaacata
     3541 aatgactaac gggtgggaat atgacgctaa tttaaagtga agaactttaa aaatcgataa
     3601 gttaaacgtg agaataaaga cgtttttcca gatttattag tgttagattt cccgcctgtt
     3661 ttttctgaaa aaaggagaac atacatatga aatggtttaa aggaattgcc gtagttttat
     3721 tgcttgctat tttaactgca tgcgggaata cggaagtaaa agagacaaca aagcaaacag
     3781 aagaaatcaa agtgaaagat gcaactggtg aaacaattac actgaaaaaa gctccaacta
     3841 aaattgtttc attaattcca agtaatacag aaattttatt tgcactagga cttggtgatg
     3901 aagtaaaagg agtatcggca tatgatgatt atccaaaaga agctcagaaa atagagaaag
     3961 tgacttctac ttcagttgat acagaaaaaa ttattgctct taagcctgat ttagttcttg
     4021 gacacgaatc gatgcttgca acagaaaaag acgcttataa aatacttaca gatgcgggaa
     4081 ttaacgtgtt tgtagttcca gacgcaacaa acttaaagga agtagaaaaa tcgattgcta
     4141 ccattggtga tctaacagga acagaaaaag aagctacaaa agtgaccgat tcaatggaga
     4201 aacaaaaagt agctattgaa aagaaagcga aagaattaaa aacatcccca aaagtatgga
     4261 ttgaaattag tccagactta tacacagcag gaaaaggaac atttatgaat gaaatgttag
     4321 aacttgctgg tggaactaat attgtaacag aatcagggtt cattccttac aacgaagaaa
     4381 aagtagtaga actgcaaccg gatatcattt tatctgtcta tccagatgcc aaagcaacta
     4441 tccaaaaacg tgcagcatgg aaagatattc cagcggttaa aaacgataaa atctatgaaa
     4501 tggatgccaa taaattaagt cgtccaggac caagattgct tgaaggggca gcagatattc
     4561 aggctgttct tgaaaactaa ttctttgata attgcagatg aagctttaca aaaaatgact
     4621 tttaaggtaa tttaacatag ggtggatttt ttactaaacc gtattagtaa aataatttgc
     4681 caaataagca gagctatata cacttagaag atcatgcata aacagcaaga atatggcaac
     4741 cgagacgaca aataatacaa acaaggtgtc tgtggtttta agtggaggag ttgcctataa
     4801 aagaatagtg agctgaatct ggttattaaa accatattat ttttcgggaa gaagtgtttt
     4861 tgtgaaacag gttatggaag ttattaaaga acaaataaaa aatttaccaa tgatatttcg
     4921 cattgcgcgc tatgaagata aggctacata
//
LOCUS       DASDYO010000165         4949 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.165, whole genome shotgun sequence.
ACCESSION   DASDYO010000165 DASDYO010000000
VERSION     DASDYO010000165.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4949)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4949)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4949
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.165"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..884
                     /gene="galU"
                     /locus_tag="U0290_002761"
     CDS             <1..884
                     /gene="galU"
                     /locus_tag="U0290_002761"
                     /EC_number="2.7.7.9"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701880.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="UTP--glucose-1-phosphate uridylyltransferase
                     GalU"
                     /protein_id="HEM2302789.1"
                     /translation="VKKAVIPAAGLGTRFLPATKAMPKEILPIVDKPTIQYIVEEAVA
                     SGIEDILIVTGKGKRAIEDHFDSVPELENNLREKNKLELLHLVEQTTNINLHFIRQAK
                     PKGLGDAILQAKGFVGNEPFIVMLGDDIVESKIPCSKQLMNQYEKTHSSVIGVQTVPH
                     EETYRYGIIDPINEYDKNLYNVKGFVEKPDPANAPSDLAILGRYLLTPQIFDFLETQK
                     PGAGGEIQLTDAINSLNEVQRVFAYDFEGQRFDVGDKFGFIQTTMQFALKHPEIKDDV
                     KDLINDLYNQIHKKDKK"
     gene            complement(933..1943)
                     /locus_tag="U0290_002762"
     CDS             complement(933..1943)
                     /locus_tag="U0290_002762"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724624.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302790.1"
                     /translation="MSIVVEQLVMKDTGERWGSPYLLEQLKINLANTSADFVIVCSKS
                     DQNILSQIQDYLARFADNMVGADIHLFNQNPLFVQHLRKLPNEDSYEMTDTLQFLEET
                     IPNPTSTYLERDPHMLLEEVGQYILYNVAFLKAYFEKAEITHELINIFHKANMVWKHS
                     VLEETKKNEEKMKVPDNYLINDMVDCWSYYRNLENKYTSLSLELLDFDKNLFNYLIRT
                     KLGPIFQKKLMAEDLTEAVDAIDALTVFLETNNKRLVSELISLGYFYIQVPVKEYSHW
                     EKNKQFGTAYLKFLKVLFDKMHYQTKQYYLSYYRRATNAVYKAVGLNSLNPIAKSYKL
                     YF"
     gene            complement(1940..4264)
                     /locus_tag="U0290_002763"
     CDS             complement(1940..4264)
                     /locus_tag="U0290_002763"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CDP-glycerol:glycerophosphate
                     glycerophosphotransferase"
                     /protein_id="HEM2302791.1"
                     /translation="MNSDSNNNINKNREAGISIIIPLYNVEEVILETLESIHEQTFDM
                     YEVLLIDDGSTDKTIEMVTEYISDKPKFQLHTQPNGGPASARNYGLRLANRMYICFVD
                     SDDIIPNYALQLMYDGAISTGSKLITGATKRFNSEGEWFIPMHIQYNIAKPGMKTLLK
                     NPELFYSIGPCAKLYHHSLIDGVFFPENIRYGEDQPFVLHALLQAENIYTVEKVVYYY
                     RLRDGESQSLTQSVNKDPIRILKSVFQIFDYGEAELLKNNTEYEIALKYYQRVSSVEL
                     WGALRAAIESKKSENQQIAFTMTLDWLKTKSDDFLNIIPSFRYFLLFSSIERVRYITR
                     DNKENYRQLITYLWERQGEEAKIAFRKAYPIHMKAALQIMEHNNWGAARKISFKFIIR
                     RKFKAPILIRKISRGIIFRLATLMPRKKDQVILATERSTSLEGNLLAIYDYLFYNDMP
                     QKVYVFLRKNRNWFEMFQLYYALGRTKTIVLDDYYNKIYGLKFNKKTHVVQSWHATGA
                     FKKFGFSALEGTDANTEEFETRAHSPYTDVLVSSEGIIPEYMEAFRKQANQIKPIGVP
                     RTDVFFDQEYVAYTKEKYMKMYPQLRDKKVLLYAPTFRGGPNERFNYSVVLDIAALKK
                     ELGDTHILILKFHPVIKNVSFNVDENDPFILDLTLNNDINDLMLFSDALITDYSSVIF
                     EFSLMNKPIYFFAYDIDDYLDERGFYFDYKATIPGEVFKDTPSLIESIKTGKYNYDEL
                     EVFKKKFVGSLDGNSTKRFVETYIVQANEEVKDL"
     gene            complement(4295..>4949)
                     /locus_tag="U0290_002764"
     CDS             complement(4295..>4949)
                     /locus_tag="U0290_002764"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302792.1"
                     /translation="GLRKGFLIASFCVFLLSTVAFAFIGNSVAGESQDINKYLVKQSY
                     AHIDLPVTSKQIVKQTFNVDSPFNSIQIAVLKEPDEASKYRLKVVDKTNKKDIYDEVI
                     AGSDFVEATNYQINVNEKPKGKTEYVIEVYQVENKNPEKPLVLGTYTPDAVDLYPYGA
                     LYVNGVKKEKQDMGFTVSHVASEPIIPKYVSAIFDLGVIIIFAGTYYVFRRKTGDNR"
BASE COUNT         1636 a          921 c          732 g         1660 t
ORIGIN      
        1 gagtaaaaaa agctgtaatt ccagctgctg gtctaggcac gcgcttttta ccagcaacaa
       61 aagcaatgcc taaagaaatc ttaccaattg tggataaacc aactattcaa tacatagtag
      121 aagaagcagt agcatctggc atagaagata ttttaattgt aaccggtaaa ggtaaacgtg
      181 ctatcgaaga ccattttgat tccgttcctg aacttgaaaa caatctacgg gaaaaaaata
      241 aacttgaatt actacattta gtagaacaaa ctactaacat taatttgcac tttattcgtc
      301 aagcgaaacc aaaaggactt ggtgatgcca tccttcaagc aaaaggcttt gtgggtaatg
      361 aaccatttat cgttatgtta ggtgatgata ttgttgaatc caaaatccct tgttccaaac
      421 aattaatgaa tcaatatgaa aagacgcata gttccgtcat tggagtccaa actgtccctc
      481 acgaagagac atatcgttat ggtattattg atccaattaa tgaatatgat aagaatttat
      541 ataatgtgaa aggttttgtg gaaaaaccag atcctgctaa tgcaccgtct gatttagcta
      601 tccttggccg ttacttatta acaccacaaa ttttcgactt cttagaaacg caaaaaccag
      661 gtgcaggagg cgaaattcaa ctaaccgatg caatcaatag tctaaatgaa gtacaacgtg
      721 tatttgctta tgactttgaa ggacagcgtt ttgatgttgg cgataaattc ggctttatcc
      781 aaacaacaat gcaattcgct ttgaagcatc ctgaaatcaa agatgatgtg aaagatctga
      841 ttaacgactt atataaccaa attcataaaa aagataaaaa ataaaaaaag agatgacaaa
      901 tgaaaatttt gtcatctctt ttttacatgc atttaaaagt acagcttgta acttttggca
      961 ataggattta aagaatttaa accaactgct ttatacactg catttgtcgc acggcgataa
     1021 taacttaaat aatattgttt cgtttgataa tgcattttat cgaaaagaac ttttaagaat
     1081 ttcaaataag ccgttccaaa ttgtttattt ttctcccaat gagaatactc tttcactgga
     1141 acttgtatat aaaagtaacc taacgaaata agttcactca caaggcgttt attattcgtt
     1201 tcaagaaaaa cagtaagcgc atcaattgca tcaactgcct ctgttaaatc ttccgccatt
     1261 aatttctttt gaaaaattgg acctagtttg gttcgaatca aatagttaaa taaatttttg
     1321 tcaaaatcaa gtaactctaa acttaaagaa gtatacttgt tttccaaatt tcgataatac
     1381 gaccaacaat caaccatatc attgatcaag taattatctg gaactttcat tttctcttcg
     1441 tttttcttcg tttcttccaa aacactatgt ttccaaacca tattggcttt atgaaaaata
     1501 ttaattaatt catgcgtaat ctctgccttt tcaaagtacg ctttcaaaaa agcaacatta
     1561 tacaaaatat attgccccac ttcttcaagc aacatatgtg gatcacgttc caaataagtg
     1621 ctagttggat tcggaatcgt ttcctctaaa aattggagtg tatccgtcat ttcataacta
     1681 tcttcatttg gcaattttcg taaatgttgt acaaaaagag ggttttgatt aaataaatgg
     1741 atatcagcac cgaccatatt atcagcgaaa cgagcgagat agtcttgtat ttgcgaaaga
     1801 atattttgat cgcttttcga acaaacaata acaaaatctg ctgatgtatt agcaagattt
     1861 atctttagtt gctctaacag ataaggactt ccccatctct caccagtatc tttcataacg
     1921 agttgttcca ctacaatact cataaatctt tcacttcctc atttgcttga acaatatagg
     1981 tctctacaaa acgcttcgtt gaattaccat ctaagcttcc aacaaatttc tttttaaaga
     2041 cttccagttc gtcgtaatta tattttcccg ttttaatcga ctcaatgagc gacggcgtat
     2101 ctttgaaaac ttcaccagga atagttgctt tgtaatcgaa ataaaatccg cgttcatcca
     2161 aataatcatc aatatcatat gcaaagaaat aaattggctt attcattaaa ctaaattcaa
     2221 aaataaccga agaataatct gtaataagcg catcactaaa taacattaaa tcattaatat
     2281 cgttattcaa cgtcaagtct aaaataaatg gatcattttc atccacatta aatgaaacgt
     2341 tcttaataac aggatggaat tttaaaatta aaatatgtgt atcaccaagt tcttttttca
     2401 aagcagcaat atcaagtaca acgctataat taaagcgttc atttggccca ccgcggaaag
     2461 ttggcgcata tagcaacact tttttgtcgc gaagttgcgg atacattttc atatattttt
     2521 cttttgtata tgccacatat tcttgatcaa aaaacacatc tgttctaggc acaccaatag
     2581 gtttaatttg attagcttgt tttctaaaag cttccatata ttcaggaatt atgccttctg
     2641 aactaacaag aacatctgtg taaggcgaat gagcacgtgt ctcaaattct tctgtattag
     2701 catctgtacc ttcaagcgca ctaaagccaa actttttgaa agcccctgtc gcatgccatg
     2761 attgtaccac atgtgtcttt ttattaaatt tcaaaccata aattttgttg taataatcat
     2821 ctaatacaat tgttttagtt cgccctaatg cataatacaa ttggaacatt tcaaaccaat
     2881 tacgattttt ccgtaaaaac acatagactt tttgtggcat atcattataa aacaggtaat
     2941 cataaatggc taataaattt ccttctaagc ttgtactacg ttctgtagct aaaataactt
     3001 ggtctttttt gcgtggcatc aaagtagcta gtctaaatat aatgcctctg cttattttcc
     3061 gaattagaat aggcgcctta aatttacgac ggataataaa tttaaaggag attttacgag
     3121 cggctcccca attattatgt tccataattt gtaaagcagc tttcatatgg ataggatatg
     3181 cttttctaaa tgcaattttt gcttcttccc cttgtctctc ccacaaatac gtaattagtt
     3241 ggcgatagtt ttctttattg tctcttgtaa tatagcgaac acgttcgata ctactgaaca
     3301 acaagaaata tctaaaggaa ggaattatat ttaggaagtc atctgatttg gtttttaacc
     3361 agtctaatgt catcgtaaaa gcaatttgtt ggttttcact tttcttactt tcaatagccg
     3421 cccttaaagc gccccaaagc tcaacactag atactcgttg ataatatttt aaagctattt
     3481 catattccgt attatttttg agtaactctg cttccccgta gtcaaatatt tgaaaaacag
     3541 attttaaaat acgaattgga tctttattta cagattgcgt taatgattgc gattcaccat
     3601 cacgtaagcg gtaataataa actacttttt ctacagtata gatattttct gcttgaagta
     3661 aagcatgcaa aacaaatggt tgatcttcac cgtaacgaat attttcaggg aaaaacacac
     3721 catctatcaa agaatgatga tagagtttcg cacaaggacc tatcgaataa aatagctcgg
     3781 gatttttcag tagtgttttc attcctggct tggcaatatt atattggata tgcatcggaa
     3841 tgaaccattc accttctgaa ttaaagcgtt tcgttgcacc tgtaatcaat tttgaaccag
     3901 tggatattgc accgtcatac attagttgaa gtgcatagtt cggaataata tcatcactgt
     3961 ccacaaagca aatatacatt ctattcgcaa gacgcaaccc ataattccta gccgaagctg
     4021 gtccaccatt tggttgagta tgcaactgaa attttggctt atctgatata tattctgtca
     4081 ccatttctat tgttttatcc gttgaaccat cgtcaattaa taaaacttcg tacatgtcaa
     4141 atgtttgctc atggatgctt tcgagcgttt ccaggattac ttcctccaca ttatataatg
     4201 gaataataat acttattccc gcttctcgat tcttattgat gttattattt gaatcactgt
     4261 tcatttatag actctcccta attcaaaata tatgtcatct attatctcca gttttccttc
     4321 taaacacata atatgttcct gcaaaaataa ttataacacc caaatcaaaa atagcggaga
     4381 catatttcgg tattattggt tcagaagcaa catgtgagac agtgaagccc atatcttgct
     4441 tctctttttt aacaccatta acatacagtg ctccatacgg ataaagatct actgcatctg
     4501 gagtataggt acctaaaact aatggttttt cagggttttt attttccact tgatagactt
     4561 caataacata ttcagtttta ccttttggct tttcatttac attaatttgg taatttgtag
     4621 cttctacaaa atctgatcca gctataactt catcgtaaat atccttctta tttgtcttat
     4681 ctacaacttt caaacgatat ttactagctt catctggctc ttttagaacc gctatttgga
     4741 tagaattgaa cggcgaatct acattaaacg tttgcttaac aatttgtttg ctagtaacag
     4801 gaagatctat atgcgcataa ctttgtttta caagatattt attgatatcc tgtgactcgc
     4861 ctgctaccga atttccaata aaagcaaaag caactgtact taataaaaat acgcagaaac
     4921 tcgcgattaa aaagcctttt cttagccct
//
LOCUS       DASDYO010000166         4840 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.167, whole genome shotgun sequence.
ACCESSION   DASDYO010000166 DASDYO010000000
VERSION     DASDYO010000166.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4840)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4840)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4840
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.167"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            111..470
                     /locus_tag="U0290_002765"
     CDS             111..470
                     /locus_tag="U0290_002765"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466117.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302793.1"
                     /translation="MKKPSIIFIFCTLLFVTACSTSENQTQATEATGTIEQVETDAIL
                     INNFKEKKDKYNPEATIRFDIVDKYYDETGNKIKITDLNKNDDVKIILTNDFPIQETS
                     PAPIDPKYVQKIILLNK"
     gene            592..1014
                     /locus_tag="U0290_002766"
     CDS             592..1014
                     /locus_tag="U0290_002766"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466116.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MerR family transcriptional regulator"
                     /protein_id="HEM2302794.1"
                     /translation="MNIKQAADMFGLTVDTLRYYERVGVIPPVHRNESGYRDYKTSDL
                     NWVYLVKNLRNAGLSVESLIEFATLAQLRETQNVEAAQKQVLVDQLKELDEKLAEMKK
                     VRELLVYKIDSYDSHIAQFKAGELNADNVEKLWKRDKF"
     gene            1036..1887
                     /locus_tag="U0290_002767"
     CDS             1036..1887
                     /locus_tag="U0290_002767"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466115.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2302795.1"
                     /translation="MKTVKLNNGVEVPILGFGTYQITDAAEAEQAVKDAIETGYRHID
                     TAQSYMNEEAVGRGIVASGVDRKELFITTKIWVENVSYKGVMSSFDRSLKRLGLDYID
                     LLLIHQPFNDVYGAWIAMEELQASGKIRAIGVSNFSPDRVIDLAAFNEVTPQVNQIEV
                     NPFQQQAANLAVLRKEGVAIEAWAPFAEGKNDIFNNPVLTKIGAKYGKSAAQVILRWL
                     VEQDIIVLAKSVKPERMAQNLAIFDFELTEADKGEIASLDQGESQFFSHADPEMVKWM
                     ASRKLNV"
     gene            complement(1928..3454)
                     /locus_tag="U0290_002768"
     CDS             complement(1928..3454)
                     /locus_tag="U0290_002768"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466114.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2302796.1"
                     /translation="MDRKFIKPGIILLIVAFLVVSINVGAETGGSRTAQVNLTTSQQA
                     FIDEILPAAQDGYRDGKLLTSVTLAQAILESNWGESGLSQNSNNLFGIKGTYKGESVS
                     MGTMEASGSTTANFRVYPSWKESIEDHTALITENARYQDAVGETNYRKALQAIKDGGY
                     ATDPDYVSKLVAIIERYNLDKYDIIYDKIESNQSLAAIGTVAENKEQEVIWSAPYNTE
                     NANKIGTLENYLGRNLEISWEAKTEKGLWYFIRENNKDIGWINSNALKISYHQKEDEN
                     VHLTKYVDDLSAHVYRLPSPEKQFDNGTIAKYDRKALEVDKKITRGGYAWFRISEGEK
                     VIGWVRADKLNDRLYDRITEQTSYDGYALVSKSATDNVWTAPFNTKNAEKLAPFADYD
                     NEKLELVTRAKAGNTLWYQFKVDGKLVGWASEKDLNVFYTPAKEEPVKQVAYVKDPTA
                     KLYNKPVESTSTNPKAVGFYYGKLLAVDKTATILGEDWLHLKDRQNSLGWIKAIDINS
                     "
     gene            3723..4751
                     /locus_tag="U0290_002769"
     CDS             3723..4751
                     /locus_tag="U0290_002769"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466113.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Mrp/NBP35 family ATP-binding protein"
                     /protein_id="HEM2302797.1"
                     /translation="MLNEQQITRLLYRLQDPVLEASLEETEGVLEVQVLEETANIKIA
                     LADPAVETDHFVHNIEELLTQFGVNEINIELEYLPAAVIDRIFQARDNILSEASETKF
                     LAIASGKGGVGKSTVSANLAIALAQQGKKVGLLDADIYGFSIPVLLGTTESPRKENGQ
                     IIPVETHGIQMISMDFFVEQGEPVIWRGPMLGKMIKMFLEEVRWGKLDYLLIDLPPGT
                     GDVALDIHTLIPKCNELIVTTPHYAAASVASRAGYMAAKNNHKIIGVIENMSYLTLAD
                     GQVLKVFGQGGGEKVAADLETQLLIQLPIEQPEPNGNGYVSALFNSSSTSGKAYKTLA
                     EKIIPYLS"
BASE COUNT         1586 a          889 c          943 g         1422 t
ORIGIN      
        1 cagtttggaa atttcggtat gactttagtt attcagtaca ttttatgcta tgatttaagt
       61 gtcaatattt actggattaa aacaagagag ataaaaagga gccccacacc atgaaaaaac
      121 cctcaatcat ttttattttt tgcacattac tctttgtaac agcatgctca acctccgaaa
      181 accaaacaca agccaccgaa gcaaccggca caatagaaca agttgaaacg gatgcaattc
      241 taattaataa tttcaaagaa aaaaaggata agtataatcc ggaagccaca atacgctttg
      301 acatcgtaga taaatattac gacgaaacgg gaaataaaat aaaaataacc gacttaaaca
      361 aaaacgatga cgtaaaaatt attttaacca acgatttccc aatccaagaa acctcgccag
      421 ccccaataga cccaaaatac gtacaaaaaa tcatcctgct aaacaaataa aactctctcg
      481 tccgcagaga gttttttctt ttctcaaaaa aataaactca aattccttgc cttggtgtga
      541 actccagggt ttataattct atatgtaaag aacgaaacga ggtgatggag gatgaatatc
      601 aaacaagcgg ctgatatgtt tggtttaaca gtagatacgt tgcgttatta tgagcgggtc
      661 ggtgttattc cgccagtcca tcgtaacgaa agtggttacc gggactataa aacgagtgac
      721 ttgaactggg tttatctcgt gaagaattta cggaatgcgg gattatcggt agaatcgtta
      781 attgagtttg cgacacttgc gcagctcaga gagacgcaaa atgtcgaagc ggcgcaaaaa
      841 caagtactgg ttgaccaact aaaagaatta gacgaaaaat tagccgagat gaagaaggtc
      901 agagaactac tcgtgtacaa aatcgattcg tacgatagtc acattgcgca gtttaaagct
      961 ggcgaattaa atgcagataa tgtagaaaaa ttatggaaac gggacaaatt ttaaagataa
     1021 gaggaggatt ttcaaatgaa aacagtgaaa ttaaacaatg gtgtagaagt acctatttta
     1081 ggatttggga catatcaaat tacagatgct gctgaagcgg aacaagcagt aaaagatgcg
     1141 attgaaacgg gctatcgtca cattgatacg gcgcaaagtt atatgaatga agaagctgta
     1201 ggtcgcggaa ttgtggcatc cggcgtcgat cgcaaagaac tattcattac gacaaaaata
     1261 tgggtggaaa atgtaagtta taaaggtgtt atgagctcat ttgaccggtc gttaaaacgt
     1321 ttagggttgg attacattga tttgctgcta attcatcaac ctttcaacga tgtatacggg
     1381 gcatggatag cgatggagga attacaagca tcaggaaaaa ttagagcaat tggcgtatcg
     1441 aattttagcc cggatcgcgt aattgaccta gctgcgttca atgaagtaac tccgcaagtc
     1501 aaccaaattg aagttaatcc tttccaacaa caggcagcga atctagctgt tttaagaaaa
     1561 gaaggggttg caatagaagc atgggcaccg tttgcggaag ggaaaaatga tatttttaat
     1621 aacccagttt taacgaaaat tggtgcgaaa tatggaaaat cggccgctca agtaattttg
     1681 cgttggctag tagagcaaga tattatcgtc ttagctaaat ctgtaaaacc agaaagaatg
     1741 gcgcaaaatc tggctatatt tgattttgaa ttgacggagg cagataaggg agaaattgcc
     1801 agcctagatc aaggggaaag ccagttcttc tcacatgcgg atccagaaat ggtgaaatgg
     1861 atggctagtc gcaaactgaa tgtataaacg aaaaaaggtt ctgcgtaaat gcagaccctt
     1921 tttttattta actattgatg tcgatagctt taatccatcc tagtgaattt tgtctgtctt
     1981 taagatgcaa ccaatcttca ccaagaatgg ttgctgtttt atccactgct aataattttc
     2041 cataatagaa gcccactgct tttgggttag tacttgttga ttctacaggt ttgttataaa
     2101 gttttgctgt tgggtctttc acgtaagcga cttgttttac tggttcttct ttagcgggag
     2161 tataaaatac atttaagtct ttttcgctag cccatccaac aagttttcca tctactttaa
     2221 actgatacca aagtgtattt ccggctttag ctcgagtcac tagttctagt ttttcgttat
     2281 cataatctgc aaatggtgct aatttttctg cgttttttgt gttgaatggt gcagtccata
     2341 cgttatcagt tgcagattta cttactagag catagccatc gtaagaagtt tgttctgtga
     2401 tgcgatcata aaggcgatca ttcaacttat ccgcgcgaac ccagccaatt actttctcgc
     2461 cttctgaaat tcggaaccaa gcatagccgc cgcgagtgat ttttttatct acttcaaggg
     2521 cttttctatc gtattttgcg atagttccat tatcgaattg tttttcaggg cttggtagac
     2581 gatatacatg tgcgcttaaa tcatctacat atttggttaa atgaacattt tcatcttctt
     2641 tttgatgata gctgattttt aaggcattac tatttatcca accaatatct ttgttgttct
     2701 cgcgaataaa gtaccataga cctttttctg ttttagcttc ccaggaaatt tctaagttac
     2761 gccctaagta attttcgagg gtcccgattt tattagcatt ttctgtattg tacggtgccg
     2821 accaaataac ctcttgttct ttattttcag ctactgttcc aattgctgct aaggattgat
     2881 tagattcgat tttatcgtaa atgatatcgt atttatctaa gttgtaacgt tcaataattg
     2941 ctactagttt agaaacgtaa tctggatcag tcgcataacc accgtcttta atagcttgca
     3001 gtgctttgcg gtagttcgtt tcaccgacag cgtcttgata gcgcgcattt tcagtaatca
     3061 aagctgtgtg gtcttcaatg gattctttcc aactaggata aacgcggaaa ttagcggttg
     3121 ttgagccgga tgcttccatt gtccccatgg agacagactc acctttatac gttcctttaa
     3181 ttccgaataa gttattagag ttctggctta gaccactttc accccaattt gattctaaaa
     3241 ttgcttgagc gagcgttaca cttgtaagca atttaccatc gcgatatcca tcctgagccg
     3301 ctggtaaaat ttcatcaatg aaagcttgtt gtgaagtagt cagattaact tgagctgttc
     3361 tgctacctcc tgtttctgct ccaacattta tggaaactac caaaaatgcc acaattagca
     3421 gaattatccc tggttttata aactttctat ccaaatttca atgcactcct ttttatatat
     3481 ctgcaactat attatcaaaa aatgccaaaa aatttctatt acatttctat gacgaaaaac
     3541 aataactacg ccaaacctat tgggacgtaa ggactaaagc tggaaatgtt aaatatgtaa
     3601 aatttgtgaa attttcttca acaaactttt gtaccgaaaa gacaagcaat atgtgaaata
     3661 ataaaacggt catgctataa taatcagtat gtcagcgcat tcatttttgg aggtttttat
     3721 atatgttaaa cgaacaacaa attactagat tgctatatag attgcaagat cctgttttag
     3781 aggcaagctt agaagaaaca gaaggtgttt tagaagtgca agtgcttgaa gaaacagcaa
     3841 acatcaaaat cgcattagct gatccagcag tagaaacgga tcattttgtt cataatatag
     3901 aagaacttct cacccaattc ggcgtaaatg aaataaatat tgagctagaa tacctacccg
     3961 cagcagttat tgaccgcatt ttccaagcaa gagataacat actctcagaa gctagtgaaa
     4021 cgaaattctt agcaatagcg agtggtaaag gtggcgtcgg gaaatcaact gtctctgcga
     4081 atcttgcaat cgccttagca caacaaggca aaaaagtagg attattagac gcggatatat
     4141 atggattcag tattcctgta ctgctaggaa caaccgaatc cccccgcaaa gaaaatggtc
     4201 aaatcatccc agtcgaaaca cacggcattc aaatgatttc tatggatttt tttgtggaac
     4261 aaggagaacc agttatctgg cgcggaccaa tgctagggaa aatgattaaa atgtttttag
     4321 aagaagtaag atggggaaaa ctagactatt tacttatcga tttaccacct ggaactggag
     4381 atgttgcgct agatatccat acgcttatcc cgaaatgcaa tgaacttatt gttacaacac
     4441 cacattatgc agccgcgtca gtcgcatctc gagcaggata tatggcagca aaaaacaatc
     4501 acaaaatcat cggtgtaatc gaaaatatgt cttatcttac tttagctgat ggacaagtat
     4561 taaaagtatt cggacaaggc ggcggcgaaa aagttgctgc agacttagaa acacaacttt
     4621 taattcaact gccaatagaa caaccagaac caaatggaaa tggctatgta tcagcccttt
     4681 tcaactcttc aagcacttca ggaaaagcat ataaaaccct agcagagaaa ataattccat
     4741 atttatcata aaaactttgt aaaaagtatt gacgaaaggc aaaaatcttg gtatatttat
     4801 aaacgttgct gatgcggaca aaacgctttc gcaacaaaag
//
LOCUS       DASDYO010000167         4833 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.168, whole genome shotgun sequence.
ACCESSION   DASDYO010000167 DASDYO010000000
VERSION     DASDYO010000167.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4833)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4833)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4833
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.168"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            153..1679
                     /locus_tag="U0290_002770"
     CDS             153..1679
                     /locus_tag="U0290_002770"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463884.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="acyl-CoA synthetase"
                     /protein_id="HEM2302798.1"
                     /translation="MTIKKYEPLNLYTNFKKSAERYPEMPIHFDEELVTFPELGLHTT
                     YKKCEEAIIQKAAHLHKFGVRKEEKVIVYKSAKFDSYILAVAISYIGAVPIMVSPHLP
                     ASTIDIFVNRLDQPWLLFDSETSEKSHQLNNLPDSRLINAEQLFKAPLDGYTCEQEEL
                     PKDMIAYMTHTSGTTGVPKLIAHSANSMGWRTKYQRRILNFIKPRGLVAFHISPVHSR
                     FNIGVSSLMSLGFPLLPIANPTKANVEKVLREYKPYVLETHPNHFVQWASLAREKPDV
                     FQSIKFYHSTFDAINKETMAVFLRTSEYKKPIFLQIYGQSECGPMILRGHTLQSIETL
                     NARDMGIGVPGLTEVRIVDQDGNPVPAGVSGNIQMLSKGRALTYYKEEARFEENVYGP
                     WWDSGDYGMKDEQGRLFLQDRQVDLVETIDSTLAIEDKLLDTLTFLDEVVIIRGENGS
                     PQPIIAVHNDGEMNWDAWWKAVSDLPHMNEPMVMKYDEIPRTATMKVQRLQMERELKK
                     "
     gene            complement(1720..3489)
                     /locus_tag="U0290_002771"
     CDS             complement(1720..3489)
                     /locus_tag="U0290_002771"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724284.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="InlB B-repeat-containing protein"
                     /protein_id="HEM2302799.1"
                     /translation="MKSKGRLFLYVVLALSIVIGTNVFIKIDAHAAAAPPAAISQIFP
                     DDALATEIQTTLGKSSTAEVVTQTDLDTINSLTLTSKGISSLEGMNYLTNLGTLILTG
                     NQVSDISPLKGLTNLTMLQLSGNPISDISALSNLKNLQALDINDAQVTDITPLSGLTN
                     LKGLGLYNNQLENLSGVNSLHQLRSLNVSNNKLTNLDELQALSNLSVLYANENQINNL
                     QGLSNLNNLFLLDLSANQIVDTTPLAGLTKVQTLYVSNNQISDVTGISSLINLDWLDI
                     SQNKISNIRPLNSLTKLTIIQMTNQLIVNEPISFESTVTIPNLIKNIAEQTIDPDTIS
                     DNGVYANEAVTWNLPTYIPKVSYTFIERDTIGNATGNFSGTVEQPLVQYFKATFNIDG
                     QETTENVETGTLLQEPPTPVKEGYTFNGWYDAETGGTKWDFTADTMPANDITLYAQFS
                     INSYTATFDVDGVISTQAVEYQGLLEEPPAPTKDGYTFKGWYDAKTGGTKWDFTNNQM
                     PANDITLYAQFSKDASSGGDGGGTDEGGGNSENSTEGAPNTSDIDTINHIVLPATGDD
                     HVLFPIFIGTFLTSLALLTLRRK"
     gene            complement(3587..3997)
                     /locus_tag="U0290_002772"
     CDS             complement(3587..3997)
                     /locus_tag="U0290_002772"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003729091.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GNAT family N-acetyltransferase"
                     /protein_id="HEM2302800.1"
                     /translation="MDYIITTDLPNAEEFVKLRVDAGLSFRSIEVSRQALLKSVYFVG
                     LRSKEDNALIGMGRLVGDGIMFIVSDIAVLPEFQGNGYGKLIMTHIKNYIDSNLDKTA
                     CVTLLADVPADGLYKQFGFRESAPASIGMIYQMK"
     gene            complement(4063..4827)
                     /locus_tag="U0290_002773"
     CDS             complement(4063..4827)
                     /locus_tag="U0290_002773"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463882.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DeoR/GlpR transcriptional regulator"
                     /protein_id="HEM2302801.1"
                     /translation="MFPFERQNKIIHLLDQNSKITVPELSRILDVSISTIRNDLSSLE
                     ESGMIKKVHGGAVLLKSEEKFTNFNDRIIRNIEEKEAIAKEAATLVKNNQTIILDASS
                     TALALAKELHGFSRLTVITSGLYTAIELKDNPNISVILTGGIVTTNSFTLEGILGANL
                     IENIHADLCFMSAKGFTMEEGLTDFNIYETELKRLLAKRTNKLIALLDHTKMGVISTA
                     SITAAENIDLLITDNKINKALYKKFQDAGLPVKIAE"
BASE COUNT         1426 a          949 c          870 g         1588 t
ORIGIN      
        1 tctttacagg tcatcaggcg aattttccaa aataagaaaa aaagcaattt acagattttt
       61 ttacaatgat gtaaatgttt tctattacta ctcctcatta tttccacaaa gtgatataat
      121 agcaacatca aatattaaag gagcatcgcc atatgacgat aaaaaagtac gaaccactta
      181 acctctatac caatttcaaa aaatctgctg aacgctatcc agaaatgccc atccattttg
      241 atgaagagct tgttactttt cctgaattag gccttcacac tacttacaaa aaatgtgaag
      301 aggctattat ccaaaaagca gctcatctac ataaattcgg tgtacgcaaa gaagaaaaag
      361 taatcgtata taaatctgcc aaattcgatt cttatatttt agcagttgcg atttcttata
      421 ttggtgccgt gccaatcatg gtttccccgc atcttccagc gtctactatt gatatttttg
      481 ttaatcgcct tgaccaacct tggttacttt ttgattctga gacttctgag aaaagtcatc
      541 agttaaacaa tttaccagac agtagattga tcaatgctga acaattgttt aaagcgccac
      601 tagatggcta cacatgcgaa caagaagaat taccaaaaga tatgattgct tatatgactc
      661 acacttctgg aacaactggt gtgccaaaat taatcgctca ctctgcgaat tcgatgggtt
      721 ggagaacgaa ataccaacga cgtattctta atttcatcaa accaagaggg cttgtagctt
      781 tccatatctc accagtacat tctcgtttta atattggtgt ttcatccttg atgtcgctcg
      841 gtttcccgct tctgccaatt gccaatccga ctaaagcaaa tgtcgaaaaa gtgctacgcg
      901 aatacaaacc gtatgtgctc gaaacgcatc caaatcattt tgttcaatgg gcatcgcttg
      961 ctcgtgaaaa accagacgtt ttccaaagta tcaaatttta tcattctact tttgatgcga
     1021 ttaataaaga aacaatggcg gttttccttc gtacttccga atataaaaaa ccaattttct
     1081 tacaaattta tggacaaagt gaatgtggtc cgatgatttt acgtggtcat acgcttcaat
     1141 ccattgaaac gctaaatgcg cgcgatatgg gaattggtgt tcctggttta acagaagttc
     1201 ggattgttga ccaagatggt aatcctgttc cagctggggt tagtggtaat attcaaatgc
     1261 tttccaaagg tcgcgcgctt acttattaca aagaagaagc tcgttttgaa gagaatgtgt
     1321 acggaccttg gtgggatagc ggcgattatg gtatgaaaga tgaacaaggc cggttattct
     1381 tgcaagatcg tcaagtcgat ttagtagaaa caattgatag tacactcgca attgaagata
     1441 aactgcttga tacgctgact ttcttagatg aagttgttat catccgtggt gaaaacggta
     1501 gcccgcaacc aattatcgca gttcataacg acggcgaaat gaactgggac gcatggtgga
     1561 aagctgtttc tgacttgcca catatgaacg aaccaatggt gatgaaatat gatgaaatcc
     1621 ctcgtactgc aacaatgaaa gtacaacgtt tgcagatgga acgagaattg aaaaaataag
     1681 tttcaaaaaa gcagctgcgt tatgcagctg ctttttcctt tattttcttc taagtgtaag
     1741 taatgctaaa ctcgtaagaa atgttccaat aaagattgga aaaagcacat ggtcatctcc
     1801 tgttgctggt agtacgatgt ggtttatagt atctatatca ctcgtattag gagctccctc
     1861 tgtactattt tcagagttac ctccaccttc atcggttcct ccaccgtccc caccagaaga
     1921 tgcatcttta ctaaactggg catacaaggt tatatcattt gctggcattt gattgtttgt
     1981 gaagtcccat tttgttccac cagttttggc atcataccaa cctttaaatg tataaccatc
     2041 cttagttggc gctggtggct cttccagtaa accttgatac tctaccgctt gagtagaaat
     2101 gacgccatct acatcaaaag ttgcggtata actattaata ctaaactggg catacaacgt
     2161 tatatcattt gctggcatcg tatcggctgt aaagtcccat tttgttccac ctgtttcagc
     2221 atcataccat ccgttaaatg tataaccctc tttgactggg gttggtggtt cttgtaaaag
     2281 tgtccctgtt tcgacatttt ccgttgtttc ttgcccgtca atattgaaag ttgctttaaa
     2341 atattgtact aatggttgtt ctacagtccc actgaaattt ccagttgcat taccaatcgt
     2401 atcacgttca ataaaggtat agctgacttt aggaatataa gtaggtaaat tccatgtaac
     2461 agcttcattc gcatacacac cgttatcgct aattgtatcg ggatcaatcg tttgttccgc
     2521 aatgtttttt attaaattag gaatcgttac agtgctttcg aaacttatcg gttcgtttac
     2581 gattaattga ttagtcattt gaataattgt tagcttcgtt aaactgttta aaggtctaat
     2641 gttactaatt ttattttggc ttatatcgag ccaatctaga tttattaaac tcgaaatacc
     2701 agttacatca ctaatttgat tgtttgatac gtataatgtt tgtaccttag ttaagccagc
     2761 gagtggagta gtatccacaa tttggttcgc tgataaatca agcaagaaaa ggttatttaa
     2821 attacttagc ccctgaagat tgttaatttg gttttcattt gcatatagaa cgcttaaatt
     2881 gcttagcgct tgtagctcat ctaggttcgt aagcttatta ttactaacat ttaaggagcg
     2941 gagttgatgt aaactattta ctccactaag gttctccaat tgattattat ataagcctaa
     3001 accctttaga tttgttaaac cgctcagtgg cgtgatgtca gtaacttgcg cgtcgttaat
     3061 atctagagct tgtaagtttt tcaagttact aagtgcgcta atgtcgctaa tcggatttcc
     3121 actcagctga agcatggtca agttagttaa gcctttaagt ggcgaaatat cgcttacttg
     3181 attaccagtt aaaattaaag ttcctaaatt ggtcaagtag ttcatacctt ctagggagct
     3241 gataccttta gaagtaaggg ttaatgaatt aatagtatct aaatctgttt gagtgacaac
     3301 ctctgctgta ctagactttc cgagtgtagt ttgaatttct gtcgctaaag catcatcggg
     3361 aaaaatctgg ctgattgcag ctggtggtgc agcggctgca tgtgcgtcta tttttataaa
     3421 tacattcgtc ccaataacaa tcgacaacgc caaaacaacg tacaaaaaca gtctcccttt
     3481 ggatttcatc ttgctccccc tgacaaaaag tttaatagta tcttgttccc attttcttat
     3541 caccagaaac ataaaaaaac agcttgaggg cgtccccgag ctgttttcat ttcatttggt
     3601 aaatcattcc gattgaagct ggtgcggact ctcgaaaacc aaattgtttg tataaaccat
     3661 ctgctggtac atcggcaagt aatgtaacac aagcagtttt atctaaattc gaatctatat
     3721 agtttttaat atgggtcata attagttttc cataaccatt accttgaaat tccggaagca
     3781 ctgctatatc agaaacgatg aacataattc catcaccaac gagccgcccc atgccaataa
     3841 gtgcattgtc ctccttcgaa cgtagcccca caaaatacac actcttcaac agagcctgac
     3901 gtgaaacttc aatagatcgg aaactaagac cagcatctac tcgaagttta acaaattcct
     3961 ccgcatttgg taaatcagtt gtaataatat aatccatttt caatctccta tcaaaaaaat
     4021 ctctttgaac caattgtcgc ccaaagagtt tcaatttcta ttttattccg caattttgac
     4081 aggaagtcct gcatcttgga attttttata taatgcttta tttattttgt tatctgtaat
     4141 tagtaaatcg atgttttctg ctgctgtaat gcttgcggtg gagattacgc ccatttttgt
     4201 atgatctaaa agtgcgatca atttgttagt acgtttagca agaagtcgtt ttagttcagt
     4261 ttcataaatg ttgaaatcag ttaagccttc ttccattgta aaaccttttg ctgacataaa
     4321 acataaatcg gcatggatgt tttcaattaa attcgcgcca agaatccctt ccagtgtaaa
     4381 agagttcgtc gtcacaatcc cgccagttaa aataacgctg atattcgggt tgtcttttag
     4441 ttcgattgct gtataaagtc cgcttgttat gacagtcagc cttgaaaaac catgtaactc
     4501 ttttgcaagc gccagtgcag tcgagctggc atctaggata attgtttgat tgttttttac
     4561 taaagttgcc gcttctttcg caatcgcttc tttttcttcg atgttgcgaa taatccggtc
     4621 attaaaatta gtaaatttct cttcgctctt taaaagtacc gcacccccgt gtactttttt
     4681 aatcatcccg ctttcttcta atgaagataa atcatttcgg atggtactaa tcgagacatc
     4741 caagatacga cttaattctg gtacagttat tttgctattt tggtctagta gatgaattat
     4801 tttgttttgt ctttcaaatg gaaacatccg ctc
//
LOCUS       DASDYO010000168         4796 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.169, whole genome shotgun sequence.
ACCESSION   DASDYO010000168 DASDYO010000000
VERSION     DASDYO010000168.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4796)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4796)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4796
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.169"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            15..374
                     /locus_tag="U0290_002774"
     CDS             15..374
                     /locus_tag="U0290_002774"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464744.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302802.1"
                     /translation="MPSIRYIVKTDVAETFEIIKAGQVGSNIVFSEVRTFDFGELATL
                     ACEKFYFRSSNRAALFVTINNFHGETEVTIISTGSSNGFFTGIDWGAAFDYMHSVVAD
                     LKRVAIREVAIEKQEEI"
     gene            complement(419..1177)
                     /locus_tag="U0290_002775"
     CDS             complement(419..1177)
                     /locus_tag="U0290_002775"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464743.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RNA methyltransferase"
                     /protein_id="HEM2302803.1"
                     /translation="MEQIQSVKNDRVKTWKKLQTRKGRDKTGTYLVEGFHLVEEALRQ
                     DGLVLELLVSSGVSVPEEWLKGDYDVFEISTEISHLISETMTEQGVFAVVATSEPDMM
                     LLYGKKLLLVDAVQDPGNVGTLIRTADAAGYDCVVLGKGSADLYNPKVIRSTQGSHFH
                     IPVIQADLFDWIANLEEEGVPVIGAVLDDQAKSLNDMTKRDTLALMVGNEGNGISPEL
                     QDRLSEKVYIPIYGDSESLNVAVAAGILLYGLRK"
     gene            complement(1203..2282)
                     /locus_tag="U0290_002776"
     CDS             complement(1203..2282)
                     /locus_tag="U0290_002776"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464742.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="M42 family metallopeptidase"
                     /protein_id="HEM2302804.1"
                     /translation="MDEQLKMLKALTDAKGIPGNERAVRNVFREYIEPLADSFETDGL
                     GSAVAKKVGAEDGPKIMIAGHLDEVGFMVTQIDDKGFIKFQTVGGWVSQVMLAQKVTI
                     VTRSGEEITGVIGSKPPHVMTAAERQKSFDIKDMFIDVGAVDKAEVESYGIRPGDMIV
                     PAFDFTVMKNEKFLLAKAWDNRIGLAIAIEVLKNLQKEQHPNIVYGVGTVQEEVGLRG
                     AKTAAHFVQPDIGFAVDVGIAGDTPGVTDKEAMSKMGEGPQIVIYDASMVAHAGLRDF
                     VTDVADELSIPYQFEAIPMGGTDSGSIHLTGNGIPSLSITIATRYIHSHSSMLHRDDF
                     ENAVKLITEVVKRLDKEKVTEIRLG"
     gene            complement(2394..3380)
                     /locus_tag="U0290_002777"
     CDS             complement(2394..3380)
                     /locus_tag="U0290_002777"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464741.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HEM2302805.1"
                     /translation="MTIGLGITITLFAVPIHSQAAGLEDGLTSKQEKFINEIAPHAQK
                     VQKEHGILASITISQAILESNWGESKLAKDGNNLFGIKGSYQGASIKLPTKEHNGVVW
                     VGTDAVFRAYPGWYESMNDHALLFVNGPSWNPHLYGGLIKEYDFEKAAIALGKTGYSS
                     DPEYAAKLIELIKKANLNKYDTVYSERVSDKAIKAAGEVAVKDNCYVWSAPGGTKGAK
                     PIVSTTKYFGRQVSINQEVKVTDSNISWYHIHQNGESIGWIESTSIKDFYQLEDYAPT
                     VDALLKTDDNNRLVINMDIDTSELHKTKLAKADTKEKTAFNLPLLNVQSIIW"
     gene            complement(3677..4546)
                     /locus_tag="U0290_002778"
     CDS             complement(3677..4546)
                     /locus_tag="U0290_002778"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464740.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glucosaminidase domain-containing protein"
                     /protein_id="HEM2302806.1"
                     /translation="MKYRKLSKKKKQKRLIGIAGILLLVILVGVIASVVRQQYLIMTA
                     PEPDPAFHSKEQNFLNELSPRAQEIQEKHGILTSITLAQAILESDWGQSGLAQKGNNL
                     FGVKGKSPQPMVTMTTKEFVDGKWIEINANFRKYKDWNESLDSHAELFLKGTSWNKDK
                     YNGVIAADDYKKAAQELQSAGYATDPDYAEKLINIIEKYDLALYDRIEDKIYYDTKST
                     GFGNVKKDVSGAIWTKPYGLSGALKVEEINYYKREDLKLLREAKTDSGVWYQIAIDTE
                     PIGWVKQELIDKK"
BASE COUNT         1347 a          981 c          819 g         1649 t
ORIGIN      
        1 aaggaggtac tgatatgcca tccattcgct atattgttaa aacggacgtt gcagaaactt
       61 tcgaaataat taaagctggt caagtgggat cgaatatcgt gttttctgaa gttagaactt
      121 ttgattttgg agagcttgca acacttgctt gcgaaaagtt ttatttccgc tcgtcgaatc
      181 gtgcagcact ttttgttacg attaataatt ttcacggaga aacagaagta acgattatct
      241 ccactggtag ttcaaatggc ttttttactg gaattgactg gggtgcggca tttgattata
      301 tgcacagtgt tgtagccgat ttaaaacgcg ttgctattcg ggaagtagct attgaaaaac
      361 aagaagaaat ctaaaaaagt ggtgactaag tcaaaacaac ttagccacca ctttttcttt
      421 attttcttaa gccgtaaagt agaattccag cagcaactgc gacattcaat gattcactgt
      481 caccataaat tggaatatat actttttcag aaagacgatc ttgtaattca ggagaaatgc
      541 cattaccttc atttccgacc atcaacgcta aagtgtcgcg ttttgtcatg tcgtttaatg
      601 atttcgcttg gtcatcaaga actgcgccaa taactggaac gccctcttct tctaaattcg
      661 caatccaatc aaataaatct gcttgaataa cgggaatatg gaaatgacta ccttgcgtac
      721 tacgaattac tttaggatta taaagatctg cacttccctt gccaagtacg acacaatcat
      781 atccagcagc atcagccgta cgaattaacg tacctacgtt gcctggatct tgcactgcat
      841 ctactagcaa taattttttc ccatataaaa gcatcatatc tggttcagat gttgcgacta
      901 ctgcaaaaac accttgctct gtcattgttt cgctaattaa gtggctgatt tctgtactaa
      961 tttcaaatac atcgtaatcg ccttttaacc actcttccgg aacagaaaca ccacttgaaa
     1021 caagcagctc cagtactaaa ccatcttgac gcaatgcttc ttccactaaa tgaaagcctt
     1081 ccaccaaata agtcccggtt ttatcgcggc cttttctcgt ttgtagtttt ttccatgttt
     1141 tgacacggtc gttttttact gattgaatct gttccataaa agttgtcctc ttttctcgaa
     1201 actcaaccta agcgaatttc tgttactttt tctttatcta aacgtttgac tacttcggta
     1261 attagtttta ctgcattttc aaaatcatca cggtgtagca tcgaggaatg agaatgaatg
     1321 tagcgtgttg caatggtaat ggatagagac gggattccgt ttccagttaa gtggatggaa
     1381 cctgagtctg taccgcccat tgggattgct tcaaattggt aagggataga tagttcatcc
     1441 gctacatctg tgacaaaatc acgaagtccg gcatgcgcta ccatagatgc atcgtaaatg
     1501 acgatttgtg gaccctcacc cattttgctc attgcttctt tgtctgtaac gcctggtgta
     1561 tctcctgcga taccaacgtc aacggcaaaa ccaatatctg gttgaacgaa atgcgcagct
     1621 gttttggcac cacgtaaacc aacttcttct tgaacagttc ctacaccgta aacgatattt
     1681 ggatgttgtt ctttttgtaa gtttttaagt acttcaatcg caattgcaag gccaatacgg
     1741 ttatcccatg cttttgcaag taagaatttt tcgtttttca ttacggtaaa gtcaaaagca
     1801 ggtacaatca tgtcgcctgg acgaatgcca tagctctcca cttcagcttt atctactgca
     1861 ccgacatcaa taaacatgtc tttaatatcg aatgattttt ggcgttctgc tgctgtcatc
     1921 acatgtggtg gtttagaacc gataacacct gtgatttctt cgccagagcg cgtcacgata
     1981 gttacttttt gtgcgagcat tacttgggaa acccagccgc ccacagtttg aaatttgata
     2041 aaacctttat cgtcaatttg cgttaccata aagccaactt catctaaatg gccagcaatc
     2101 ataattttag gtccatcttc tgctccgact ttttttgcaa cagcacttcc taagccatct
     2161 gtttcaaaac tatccgctag cggttcgatg tattcgcgga acacatttct cactgcacgt
     2221 tcgttaccgg gaataccttt tgcatctgtt aatgctttta acatctttaa ttgttcatcc
     2281 atataaataa ccctccttat aaactccatt ttcattataa cagtttcttt ctaaaaatcc
     2341 tttgaaaacg caaaaaaagc cgagtaatct attcagcttt ttttgcaagg ttattaccag
     2401 atgatggatt gaacgttcag taaaggtaaa ttaaaggcag ttttctcttt ggtatctgcc
     2461 tttgctagtt ttgttttgtg tagctcagat gtatcgatat ccatattgat tactaaacga
     2521 ttgttgtcat ctgtttttag taatgcatct actgttggcg catagtcttc taattgatag
     2581 aagtctttaa tcgatgtact ttcaatccaa ccgatggatt ctccattttg atggatatgg
     2641 taccaagaaa tattggaatc tgttactttt acttcttgat taatagaaac ttgacggcca
     2701 aagtatttgg tagtgctgac gataggtttc gcaccttttg tgccacccgg agcagaccaa
     2761 acatagcaat tatctttgac agctacttct ccagcagcct taattgcttt gtctgataca
     2821 cgttcgctat aaacggtatc gtatttattt aaatttgctt ttttgatcag ttcaattaat
     2881 ttcgctgcat actctggatc agatgaatag cctgtttttc caagggcaat agctgccttt
     2941 tcaaagtcat attctttgat tagtcctccg tataaatgag ggttccaaga cggtccattg
     3001 acaaataaaa gtgcgtggtc attcattgat tcataccaac ctgggtacgc acggaaaaca
     3061 gcatctgttc caacccaaac aacgccatta tgttctttgg taggtaattt aatagaagct
     3121 ccttgatagg aacctttaat tccgaataaa ttattgccat cttttgctaa tttactttcg
     3181 ccccaattgg actctaggat tgcttgcgaa atcgtaatac tagctaaaat accatgttct
     3241 ttttgcactt tttgagcatg cggcgcaatc tcattaataa acttctcttg cttggaagtc
     3301 aagccgtcct ctagaccagc agcttgggag tggattggta ctgcaaataa tgtaattgta
     3361 attccaagtc caattgtcac caaatgcttc tttgcgagct gtaacataat gatttattgc
     3421 acatccttct ttgatttatc cttccagctt ttgaaaaact ggaaactagt gttctttaaa
     3481 acaaccactt cattctatca aaacattctt gtaatacaca ttacttttac attacttatg
     3541 ttacaatata cgctcgtagc tttgatatag ccctttctca aagttcgtat tgatgaaaat
     3601 aaaaaagaaa aagagcttaa aaaggacttt atgcctataa ataagacaag tcattttgct
     3661 ctttttcggt tattttttac tttttatcga ttaattcttg tttcacccaa ccaatcggct
     3721 cggtatctat tgcaatttga taccaaacac cgctatcggt ctttgcttca cgtaaaagtt
     3781 tcaaatcttc acgtttatag tagttaattt cttctacttt tagcgcgccg gaaagtccat
     3841 atggtttcgt ccaaattgcg ccagatacat cttttttcac attgccgaag ccagttgatt
     3901 ttgtatcata atagatttta tcttcaattc ggtcgtataa tgctaaatca tatttttcga
     3961 taatattgat taatttctcc gcataatctg ggtcagttgc atagccagct gattgtaatt
     4021 cttgcgcggc ttttttataa tcatctgcag caattactcc attatattta tctttattcc
     4081 aagaagtgcc cttcaaaaaa agttcagcgt gcgaatcgag tgactcattc cagtctttat
     4141 attttcggaa attagcatta atttcaatcc atttaccatc aacaaattct ttcgttgtca
     4201 tcgtcaccat tggttgtggc gattttcctt tgacaccaaa tagattgtta cctttttgcg
     4261 ctaaaccgct ttggccccag tctgattcga gaatggcttg agcgagtgta atactcgtta
     4321 agataccgtg cttttcttga atttcttgtg cacgtggcga aagttcattt aaaaagtttt
     4381 gttctttgga atgaaatgct ggatccggtt ctggtgcagt cataattagg tattgctgtc
     4441 taacaactga tgcaatgaca cctactagaa ttactagaag taaaattccc gctattccaa
     4501 ttagcctctt ttgtttcttc tttttagata atttcctata tttcagatgt cgtcacgcct
     4561 ttctgtctac gaatcccttg atggtactag aatacgttac tttcattaca attgcaatcc
     4621 atctaggggt ctattttagt gaatttaaga aatctttaac atttatatga ttcagcaaaa
     4681 atattgattt atagccaatg aatccgcaaa tgatattaat aattcttcgt tttgtaacat
     4741 ttgccatcat ttagtcatat aaaaataaaa tgatttatga aaaatatcat ttacta
//
LOCUS       DASDYO010000169         4742 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.170, whole genome shotgun sequence.
ACCESSION   DASDYO010000169 DASDYO010000000
VERSION     DASDYO010000169.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4742)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4742)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4742
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.170"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            397..705
                     /gene="spoVG"
                     /locus_tag="U0290_002779"
     CDS             397..705
                     /gene="spoVG"
                     /locus_tag="U0290_002779"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463727.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation regulator SpoVG"
                     /protein_id="HEM2302807.1"
                     /translation="MEITDVRLRRVETDGRMKAISSITIDGEFVIHDIRVIDGNEGLF
                     VAMPSKRTPDGEFRDIAHPINSGTRAKIQEAVLAAYEVADEPAVNEESSADESIVEEN
                     "
     gene            824..1132
                     /gene="spoVG"
                     /locus_tag="U0290_002780"
     CDS             824..1132
                     /gene="spoVG"
                     /locus_tag="U0290_002780"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463728.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="septation regulator SpoVG"
                     /protein_id="HEM2302808.1"
                     /translation="MQVTDVRLRRVETDGRMRAIASITLDEEFVVHDIRVIDGNNGLF
                     VAMPSKRGVDGEFRDIAHPINSDTRAKIQEVVLAEYERVGEEEATAVTEEESESVSAE
                     "
     gene            1519..2892
                     /gene="glmU"
                     /locus_tag="U0290_002781"
     CDS             1519..2892
                     /gene="glmU"
                     /locus_tag="U0290_002781"
                     /EC_number="2.3.1.157"
                     /EC_number="2.7.7.23"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463729.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="bifunctional UDP-N-acetylglucosamine
                     diphosphorylase/glucosamine-1-phosphate
                     N-acetyltransferase GlmU"
                     /protein_id="HEM2302809.1"
                     /translation="MSKRYAVVLAAGQGTRMKSKLYKVLHPVCGKPMVEHVVDQISTL
                     NVDKVVTIVGHGAEKVQEHLAGKSEFVKQEEQLGTAHAVLQAKAELAGKDGVTLVVCG
                     DTPLIEASTMEALLKYHHEKRAKATILTTVIEDPTGYGRIIRDDLGIVEKIVEHKDAT
                     EKEQRISEINTGTYCFDNKALFEALENVSNDNVQGEYYLPDVIKILKDSDEVVAAYRM
                     ESFEESLGVNDRIALAEASRLMQRRINENHMRNGVTLVNPENTYIDIDVKIGQDTVIE
                     PGVMLHGETVIGDDCVVTSGSEIVNSVIGERVHVRTSSIFESKVGDDVQIGPYAHLRP
                     ESDIHDHVKIGNYVETKKAVVGEGTKLPHFIYMGDAEIGKNVNVGCGSIAVNYDGKNK
                     AKTIIGDNVFVGCNSNLIAPVKVGDRAFIAAGSTITKDVPDDALGIARAKQDNKLGYA
                     KHLNHGK"
     gene            2943..3899
                     /locus_tag="U0290_002782"
     CDS             2943..3899
                     /locus_tag="U0290_002782"
                     /EC_number="2.7.6.1"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463730.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribose-phosphate diphosphokinase"
                     /protein_id="HEM2302810.1"
                     /translation="MSNEYFDPKLKIFSLNSNRELAEEIAKEVGIELGKSSVTHFSDG
                     EIQINIEESIRGCHVYVIQSTSNPVNQNLMELLIMIDALKRASAATINIVMPYYGYAR
                     QDRKARSREPITAKLVANLIETAGATRMITLDMHAPQIQGFFDIPIDHLNAVRLLSDY
                     FSERHLGDDLVVVSPDHGGVTRARKMADRLKAPIAIIDKRRPRPNVAEVMNIVGNVEG
                     KVCIIIDDIIDTAGTITLAAKALREAGATKVYACCSHPVLSGPAMKRIEESPIEKLVV
                     TNSIALPEEKWIDKMEQLSVAALLGEAIVRVHENASVSSLFE"
     gene            complement(3943..4656)
                     /gene="prfA"
                     /locus_tag="U0290_002783"
     CDS             complement(3943..4656)
                     /gene="prfA"
                     /locus_tag="U0290_002783"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463731.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="listeriolysin O transcriptional regulator PrfA"
                     /protein_id="HEM2302811.1"
                     /translation="MNAQAEEFKKYLETNGIKPKQFHKKELIFNQWDPQEYCIFLYDG
                     ITKLTSISENGTIMNLQYYKGAFVIMSGFIDTETSVGYYNLEVISEQATAYVIKINEL
                     KELLSKNLTHFFYVFQTLQKQVSYSLAKFNDFSINGKLGSICGQLLILTYVYGKETPD
                     GIKITLDNLTMQELGYSSGIAHSSAVSRIISKLKQEKVIVYKNSCFYVQNLDYLKRYA
                     PKLDEWFYLACPATWGKLN"
BASE COUNT         1545 a          744 c          995 g         1458 t
ORIGIN      
        1 tacaattatt ttcgaaaaat gataaatcaa ataccgtttt actggtgtta ttgtctgcaa
       61 aatagtatga tgattacaga ttgatactgt aatggcaatg gttttgaagt ttttatacgt
      121 atgatgataa ttattgtata caaaacaaaa actagtagga acaatctgta aaagtcaacg
      181 attttcaaaa aaaaaaactt ttttttagat tacaattcac aaagttgtca aatttagttt
      241 tttttattat tatgttcata gggaagaatt ttacgtgaat attgcttgct ttataaaagt
      301 aattttttct atgggggaat ttttctcgag tgtgtactta agttgcatgt gagcattgtt
      361 tactagcagc gcaactagat taaggtggtg aagataatgg agattacaga tgtgagatta
      421 cgacgtgttg agacagatgg gagaatgaaa gctatttctt caataacgat tgacggtgag
      481 tttgttattc acgacattcg tgtcatcgat ggcaacgagg gtttgttcgt agctatgcct
      541 agtaaacgta cgccggatgg tgagtttaga gatatcgctc atccaattaa ctcaggcacc
      601 cgtgcaaaaa ttcaagaagc cgttttagct gcttatgaag tagcggacga accagcagta
      661 aacgaagaaa gttctgcaga cgaaagtatt gtagaagaaa actaaaaaat cctcggttag
      721 ggagaacgtt gttgggaaca gttgggggat aaatacctaa gattttagct gggataagca
      781 gattcttttt gaaagaggca aatgggataa ggagtgacta ataatgcaag taacagatgt
      841 gagattacgt cgtgtagaaa ctgatggaag aatgagagcg attgcttcaa tcactttaga
      901 tgaggaattt gtagttcatg atattcgcgt tattgatggg aataacggtt tattcgtagc
      961 tatgccaagt aaacgtggtg ttgacggtga attccgtgat atcgctcacc caatcaattc
     1021 tgacactcgt gcaaaaattc aagaagtagt tttagctgaa tatgagcgcg ttggtgaaga
     1081 agaagcaact gcagtaacag aagaagaatc tgaatccgtt tctgctgaat aatttaaaat
     1141 tttcaagggc tagctgcgtg ctagcccttt ttgtgtacat gaagcatgaa aaaaatcata
     1201 aatagccttg gtcttctatt tttgctatgg tataattaat agcagattat aaaacaggga
     1261 ggagaatttt aaatgatgtt gcaaaaacag gtccatttta gaaaactttt ttgtggcata
     1321 agtgtaaatt cttcttttag taagcaaata aataatcata ctatatcttt cggaattttc
     1381 gaacaaataa aactttaaat tgaatcttta cctaaaaaaa gtaggtaagg ttttttattt
     1441 gggcgcattc ttgaaaaaat gtaaatttta cgttatcatt catagtggat gaatagtgaa
     1501 tattggaggt tctatataat gtcaaaacga tatgctgtag tgcttgctgc tggccaaggc
     1561 acacggatga aatcaaaact ttacaaagta ttgcatcctg tttgtggaaa accaatggtc
     1621 gaacatgtag tagatcaaat ttcgacgctt aatgttgata aagtggttac aattgtaggt
     1681 cacggagctg agaaagtaca agagcattta gctggtaaaa gcgagtttgt aaagcaagaa
     1741 gagcaactcg gaacggcgca tgcagtactg caagcgaaag cggaacttgc aggtaaagat
     1801 ggtgtgacgc tcgttgtttg tggggacacg cctttaatcg aagctagtac gatggaagct
     1861 ttactgaaat atcaccatga aaaacgtgca aaagcaacta ttcttacaac ggttattgaa
     1921 gatcctacag gttatggtcg tattattcgt gatgacctag gcattgtaga aaaaatcgta
     1981 gaacataaag atgcaacaga aaaagaacaa cggatttcgg aaattaacac tgggacatat
     2041 tgctttgata ataaagctct ttttgaagcg ttagagaatg tttctaacga taatgtgcaa
     2101 ggagaatatt acttaccaga tgttattaag attttaaaag attcggatga agtcgttgcg
     2161 gcttacagaa tggagtcttt tgaagagtca cttggagtga acgaccgaat tgccctagct
     2221 gaagcatcca gattaatgca acgtcgaatt aacgaaaatc atatgcgtaa tggagtaacg
     2281 cttgttaatc ctgaaaacac gtatattgat atagatgtaa aaattggtca agatacagta
     2341 attgaaccag gagttatgct tcatggggaa actgtaatcg gtgatgattg cgtggttaca
     2401 agcggctcgg aaatcgtaaa cagtgttatc ggtgaacgag tacacgtcag aacttcttct
     2461 attttcgaaa gtaaagttgg cgatgacgtt caaattggcc catatgcgca cctaagacca
     2521 gaatctgaca ttcacgatca tgtgaaaatc gggaactacg tcgaaacgaa aaaagcagtg
     2581 gttggtgaag gaactaaatt accacatttc atttacatgg gagatgcgga aattggtaaa
     2641 aacgtcaatg ttggttgcgg aagtattgct gttaattacg acggcaaaaa caaagcgaaa
     2701 accatcattg gggataatgt ctttgttggc tgtaattcaa acctgattgc acctgtcaaa
     2761 gtgggagatc gagctttcat agctgctggt tccacgatta caaaagatgt tcctgacgac
     2821 gcgctaggca ttgctcgtgc gaaacaagac aataaacttg gttatgcgaa acatttgaat
     2881 cacggtaaat aatttccatt tgggaatttt aaaattttaa taaaaaatag tggaggctga
     2941 ttatgtcaaa cgagtatttt gatccaaagt tgaagatttt ctcgctaaat tctaatcgtg
     3001 aactagctga agagattgcg aaagaagttg gtattgagtt agggaaatca agcgttactc
     3061 attttagtga tggagaaatc caaattaaca ttgaagaaag tatccgtggt tgtcatgtat
     3121 atgttattca atcaacgagt aatcctgtaa accagaattt aatggaactt ttgatcatga
     3181 ttgatgcgtt gaaacgcgct tccgcagcaa caattaatat tgttatgcct tactatggtt
     3241 acgcacgtca agaccgtaaa gcaagaagtc gtgaaccaat cacagcgaaa ttagtagcaa
     3301 acttaatcga aactgctggt gcaactagaa tgattacact tgatatgcat gcaccgcaaa
     3361 ttcaaggttt ctttgatatt ccaatcgatc acttgaatgc agttcgcctt ctaagtgact
     3421 atttcagtga acgtcattta ggtgatgatc tagtagtagt ttcccctgac catggtggag
     3481 ttactcgagc tcgtaaaatg gctgaccgtt tgaaagcgcc gattgctatt attgataagc
     3541 gtcgtccgcg tccaaacgta gctgaagtaa tgaacatcgt tggtaatgta gaagggaaag
     3601 tttgtatcat tattgatgat attattgata cagctggaac aatcacactt gctgctaaag
     3661 cattgcgtga agcaggcgca acaaaagttt acgcatgttg ttcgcaccca gttctttcag
     3721 gtcctgctat gaaacgtatt gaagaatcgc caatcgaaaa attagttgtt acaaactcca
     3781 tcgctcttcc agaagaaaaa tggattgaca aaatggaaca attatctgtt gcagctcttc
     3841 ttggcgaagc aatcgttcgc gttcatgaaa atgcttctgt aagttcttta ttcgaataaa
     3901 atataaaaca ggatgcctca ttgagacatc ctgttttttg atttaattta attttcccca
     3961 agtagcagga catgctaaat aaaaccattc atctaattta ggagcatatc ttttgagata
     4021 atcaagattt tgtacataaa agcatgaatt tttatacacg ataactttct cttgctttaa
     4081 tttagaaata attctgctaa cagctgagct atgtgcgata ccgcttgaat agcctaactc
     4141 ctgcattgtt aaattatcca gtgtaatctt gatgccatca ggagtttctt taccatacac
     4201 ataggtcagg attaaaagtt gaccgcaaat agagccgagc ttcccgttaa tcgaaaaatc
     4261 attaaatttg gctaggctgt atgaaacttg tttttgtagg gtttggaaaa catagaaaaa
     4321 gtgcgtaaga ttcttgctca gtagttcttt tagttcgttt attttgataa cgtatgcggt
     4381 agcctgttcg ctaatgactt ctaaattata atagccaacc gatgtttctg tatcgataaa
     4441 gccagacatt ataacgaaag cacctttata gtattgtaaa ttcatgatgg tcccgttctc
     4501 actaatactt gtaagctttg taataccatc atataggaaa atacaatatt cttgtggatc
     4561 ccattggtta aaaataagtt cttttttatg aaattgtttt ggttttatcc cgttagtttc
     4621 taaatatttt ttgaattctt ctgcttgagc gttcatgtct catcccccaa tcgtttttta
     4681 tcgccctttt ttaaaatacc ctaaaaacat taggcagtaa caacaattgt tagctgttga
     4741 aa
//
LOCUS       DASDYO010000170         4725 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.171, whole genome shotgun sequence.
ACCESSION   DASDYO010000170 DASDYO010000000
VERSION     DASDYO010000170.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4725)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4725)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4725
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.171"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            65..1315
                     /locus_tag="U0290_002784"
     CDS             65..1315
                     /locus_tag="U0290_002784"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NAD(P)-dependent oxidoreductase"
                     /protein_id="HEM2302812.1"
                     /translation="MTLYRQLLARENENNPIRVGVIGAGQMGFGMISQIAAIPGMSIV
                     GISDIHVEAAQKAADAYNATATKKEKILLSNDFKEIIHSDLVEVIVDATGVPEVGAKI
                     SLETLLAKKQLVLLNVEIDITIGPLMKKLYDSAGLVYTGSDGDEPAAITELYEFSKSM
                     GMEVLVAGKGKNNKLKISANPDSCQAEADGKNMASHMLAAFQDGTKTMAEMNLLSNAI
                     GYVPDVVGMHGISGDVDSVIKDLDLKDQGGILNKFGVVEYVDGLAPGVFVIVKGQNEG
                     VSHELSYLMKKGDRDHHILYRPYHLASLETPLTIAKAVLNHDHAIVPMGAPVSETVAV
                     AKKDIAAGEKLDGIGGFCVRGVLETHVDMATNGHIPIGLISGEVVARRNIKAGTFITD
                     EDVSLDESTTVWKLRKLQDETFNK"
     gene            1370..1750
                     /locus_tag="U0290_002785"
     CDS             1370..1750
                     /locus_tag="U0290_002785"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464073.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="transcriptional regulator GutM"
                     /protein_id="HEM2302813.1"
                     /translation="MNIVLIASLIFIAQTGLAFFQVRYYQHHMNKVADKYAGKTGYYL
                     YSEMERLKFRTSAVAILVVNENRVVHECQILTGKTVFAKFKTFTNYHHKDLSEILTDL
                     SSKNKNTIQEKAIIKTVNSCMKAL"
     gene            1775..2296
                     /locus_tag="U0290_002786"
     CDS             1775..2296
                     /locus_tag="U0290_002786"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464072.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIC"
                     /protein_id="HEM2302814.1"
                     /translation="MNYIEWFGTNFIGLFEAGGKQFVSFMTGIVPLLIVLLTFTYSII
                     AFIGEERVNRAIQFSAKNMILRYTLMPVLSVLMLTNPMAYTFGRFVKEHQKPAFYDSV
                     VSFLHPVTGLFPYANAGELFVYLGIANGVVEAGYSMSSLAVRYFLAGIVVILMRGVIT
                     ESITKFLMRKEKV"
     gene            2317..3303
                     /locus_tag="U0290_002787"
     CDS             2317..3303
                     /locus_tag="U0290_002787"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIB"
                     /protein_id="HEM2302815.1"
                     /translation="MYQSIHVNKGQGGWGVGLDITPSEPRTKVVSITGGGIHPVALKI
                     AELSGAEAVDGFKNSIPEEEMMCVVIDCGGTARIGVYPMKRIPTVDVLPSSPSGPLAK
                     HITEDIFVSGVKPEDIEVRDRSTEPGKPFDREKFKEDYAKIKEDQEEASQLKEGFLVK
                     FSRGIGKAMGVFYQAGRDSVDMLIKNIIPFMAFISMIIGIINYTGIGKLIANTLSPLA
                     GSLWGMLLIAFICSLPFLSPILGPGAVIAQVIGVLIGSQIAIGAIPVTYALPALFAIN
                     AQAGCDFIPVGLSLAEAKPKTVQFGVPAILYSRMITGVLAVVIAWVFSIGMY"
     gene            3322..3672
                     /locus_tag="U0290_002788"
     CDS             3322..3672
                     /locus_tag="U0290_002788"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464070.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS glucitol/sorbitol transporter subunit IIA"
                     /protein_id="HEM2302816.1"
                     /translation="MTISKIMEIGPLVPAFEEEKIVILFGPTATNELREISVIHEFQD
                     VPNNALTKGNTLLIGEQAYTIEEVGSDANKNLEELGHISVYFRSGQNEVLPGAIVVSP
                     EIFPTITVGDSIQF"
     gene            3783..4703
                     /locus_tag="U0290_002789"
     CDS             3783..4703
                     /locus_tag="U0290_002789"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464069.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter substrate-binding protein"
                     /protein_id="HEM2302817.1"
                     /translation="MYQKHKWAAILMTVLLAVVLTACGSSSDKDSSKEKESATKTVTD
                     TMDRKVEVPTTPKRIVALQNVSEMEILGVKPVGTTDYYITTYPEATKGTESVGNDKPS
                     IEKIANLKPDLIIISDYQKDLLENLEKVAPVYITHFGDTPDKQLSNIANLLNKKAEKE
                     KWDKDYAASSKEAKATLKDAGVANEKAAVIQFYGKEIYVHDAKVFDGLYSGAGFTPTD
                     AAKANKETKAISSEAIPEYAAGADRLFILMPADGNTDSVDEMLKGVWKDIPAVKKNQV
                     YKVDNTKWSDYSASAQLYQMEDAVKQITGK"
BASE COUNT         1506 a          849 c          976 g         1394 t
ORIGIN      
        1 ataaaatagc tttatccgga gttttatttt aataaatgaa aacgattact aggaggaact
       61 tgaaatgact ttatatagac agttacttgc tcgtgagaac gaaaataatc cgattcgcgt
      121 tggtgttatc ggcgctggtc aaatgggatt cggtatgatt tcgcaaatcg ccgctattcc
      181 aggtatgagt atcgttggta ttagcgatat tcatgtagaa gcagcacaaa aagccgcaga
      241 tgcttacaat gccacagcaa ccaaaaaaga aaaaattcta ttatctaatg actttaaaga
      301 aattattcat tctgatcttg tagaagtgat tgttgatgct actggtgttc cagaagtcgg
      361 cgcaaaaatt tccctagaaa ctttacttgc taaaaaacaa ctcgttttac ttaatgtaga
      421 aattgatatt actatcggac cactaatgaa aaaactatat gacagcgctg gtctcgtata
      481 tactggctct gatggcgacg aaccggctgc gataactgaa ctttacgaat tttccaaatc
      541 tatgggtatg gaagtccttg tcgctggtaa agggaaaaat aataaactta aaatcagcgc
      601 taaccctgat agctgtcaag cggaagccga tgggaaaaat atggcgtctc acatgctagc
      661 tgctttccaa gatggaacaa aaacaatggc agaaatgaat ttactttcta atgctatcgg
      721 ttatgtccca gacgttgttg gaatgcatgg tatttcaggt gacgttgatt cggtcatcaa
      781 agatctagac ttaaaagacc aaggtggtat tttaaacaaa tttggcgttg tagaatatgt
      841 agacggtttg gctcctggcg tattcgttat cgtcaaaggg caaaacgaag gcgttagtca
      901 cgaacttagc tacctcatga aaaaaggcga ccgggatcat cacattcttt atcgtcctta
      961 tcatctagct agccttgaaa cacctctaac cattgcaaaa gctgtgttga accacgatca
     1021 cgctattgtt ccaatgggcg caccagtttc tgaaacggtt gcggttgcta aaaaagacat
     1081 agctgccggt gaaaaattag atggcattgg cggtttctgt gtacgcggtg tactggaaac
     1141 tcacgtcgat atggcaacga atggtcatat tcctatcggc ttgattagcg gtgaggtagt
     1201 agcccgcaga aatatcaaag ctggcacatt tattactgac gaagacgttt cattagatga
     1261 atccactact gtttggaaac ttagaaaact gcaagatgaa acatttaata aataatttca
     1321 acttggtggg aagtgatttg tcttcccacc ctctaaggag gaaaagtaaa tgaatattgt
     1381 ccttattgct tccctcattt tcatcgctca gacaggtctt gcttttttcc aagtgaggta
     1441 ttatcagcat catatgaaca aagttgcgga taaatatgct gggaaaactg gttattatct
     1501 ttattccgaa atggaacgac tcaaatttcg cacaagtgct gtagccattc tggtagtgaa
     1561 tgaaaaccga gttgtacatg aatgccaaat tttaaccgga aagactgttt ttgcaaagtt
     1621 caagactttc accaactatc atcataaaga tttatccgaa atattgacgg atcttagtag
     1681 taaaaataag aatacaatcc aagaaaaagc aattattaaa acagtcaaca gttgcatgaa
     1741 agcgctttaa ataactaaaa aggagtgttt cctagtgaat tatattgaat ggtttggaac
     1801 aaactttatc ggcctatttg aggctggcgg caaacagttt gtgagtttta tgacaggaat
     1861 tgtccctctt ttaattgtcc ttttaacctt tacttactcg attatcgcct ttatcgggga
     1921 ggagcgagtc aaccgagcaa tccaattttc agccaagaac atgattttgc gctatacctt
     1981 aatgcccgtt ttatccgtac tgatgctaac aaatccaatg gcttatacat ttggtcgttt
     2041 tgttaaagag catcagaaac cagcttttta tgactccgtt gtatcgtttt tgcacccagt
     2101 tacaggatta tttccatatg cgaatgctgg tgaattattc gtttatctag gcattgctaa
     2161 tggtgtggtc gaagctggat atagtatgtc aagccttgca gttcgttact tcctagctgg
     2221 aatcgtggtt atattaatgc gtggtgtgat tacagaatca attacgaaat tcttaatgcg
     2281 aaaagaaaaa gtctgaaata gaaggaggca aatgaaatgt atcaatcaat tcatgtgaat
     2341 aaaggtcaag gcggttgggg agtcggacta gatattactc cgagcgaacc gagaacaaaa
     2401 gttgtttcta ttactggtgg tggtattcat cctgtagcac tgaaaattgc cgaattatct
     2461 ggagctgaag ccgtggatgg ttttaaaaat tcaattccag aagaagaaat gatgtgtgtt
     2521 gttattgatt gtggtggcac tgcgagaatt ggtgtttatc cgatgaaacg tattccaaca
     2581 gtcgatgtgc tcccttcttc tccatcaggt ccgctcgcaa aacatattac agaagatatt
     2641 tttgtttctg gcgtcaaacc tgaagatatt gaagttcgag acagaagcac tgaacctggg
     2701 aaaccatttg acagagagaa attcaaagaa gattatgcca agattaaaga agatcaagaa
     2761 gaagcaagcc aattaaaaga aggtttcctt gtgaaatttt ctcgtggcat tggtaaagca
     2821 atgggtgtgt tctatcaagc agggcgtgat tctgtggata tgcttattaa aaatattatt
     2881 ccgtttatgg cttttattag tatgattatc ggtattatta attacactgg gattgggaaa
     2941 ttaattgcga atacgctctc tcctttagct ggatcactct ggggaatgtt attaattgct
     3001 tttatttgta gtttgccatt tctttcacct attctcggtc ctggagcagt tatcgctcaa
     3061 gtaatcggcg ttctgattgg ttctcaaatt gcgattggtg ctattccagt tacttacgcc
     3121 ttaccagcac tatttgcaat taatgctcaa gctggttgcg actttatccc cgtaggactc
     3181 tctcttgcag aagctaagcc aaaaacggtt cagttcggcg ttccagctat tctttatagc
     3241 cggatgatta ctggtgtcct tgctgttgtt atcgcatggg tattcagtat cggtatgtat
     3301 taattttagg aggaatttgc tatgactata agtaaaatta tggaaatcgg gccacttgtc
     3361 cccgcttttg aagaagaaaa aatcgttatc ttatttggac caactgctac caatgaatta
     3421 cgcgaaatat ctgttataca cgaattccaa gatgtaccga ataacgccct tacaaaaggg
     3481 aacacgttac tcattggtga acaagcgtat acaatagaag aagtcggctc agacgcaaac
     3541 aaaaatctcg aagaacttgg ccatatttcc gtctatttcc gctcaggaca aaatgaagtt
     3601 ttaccgggag ctattgttgt ttctccagaa atttttccaa caattacggt tggcgatagt
     3661 attcaatttt aaacataaaa attttttgtg ctacatttca ccttgtcaat cctccctgtt
     3721 ttcgatataa ttacttttgt aacgataatg aaaatcattt tcaattaggg aggaaataca
     3781 caatgtacca aaagcataaa tgggctgcta ttttgatgac tgtgctttta gcagtagtat
     3841 taaccgcttg tggcagttct tcggataaag actcaagcaa agaaaaggaa tccgcaacaa
     3901 aaacggtcac tgatacaatg gaccgtaaag tagaagttcc aacaacaccg aaaagaattg
     3961 tcgcacttca aaatgtaagt gaaatggaaa ttcttggcgt taaacctgtt ggtacaactg
     4021 attattacat cactacatac cctgaggcaa caaaagggac cgaaagtgtt ggtaatgaca
     4081 aacctagtat tgaaaaaatc gctaatttaa aaccagactt aattattatt agtgattacc
     4141 aaaaggatct tttagagaac ttggaaaaag tggctcctgt ttatatcacg cattttggtg
     4201 atactccgga caaacaactt tcgaacattg ccaatctctt aaataaaaaa gcagaaaaag
     4261 aaaaatggga caaagattac gcggcaagct ctaaagaagc aaaagcaaca ctcaaagatg
     4321 ctggtgttgc gaacgaaaaa gcggcagtaa ttcaatttta tggcaaagaa atctatgtgc
     4381 acgatgcaaa agtctttgac ggcttatact ccggcgcagg tttcacaccg acagatgctg
     4441 ctaaagcaaa caaagaaaca aaagctattt ctagtgaagc aattcctgaa tatgcagcag
     4501 gagcagatcg tctctttatc ttaatgccag ctgatggcaa taccgattct gtggatgaaa
     4561 tgctaaaagg tgtttggaaa gatattccag ctgtgaagaa aaaccaagtg tataaagtgg
     4621 ataatactaa atggagtgac tacagtgcct ctgctcaact ttatcaaatg gaagatgctg
     4681 taaaacaaat tactggtaaa taataaaaaa acccgattct acaaa
//
LOCUS       DASDYO010000171         4700 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.172, whole genome shotgun sequence.
ACCESSION   DASDYO010000171 DASDYO010000000
VERSION     DASDYO010000171.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4700)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4700)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4700
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.172"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(208..1704)
                     /gene="lysS"
                     /locus_tag="U0290_002790"
     CDS             complement(208..1704)
                     /gene="lysS"
                     /locus_tag="U0290_002790"
                     /EC_number="6.1.1.6"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463759.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lysine--tRNA ligase"
                     /protein_id="HEM2302818.1"
                     /translation="MSNENHEELNDQLIVRREKVDTLREEGIDPFGEKFIRSISPEEI
                     ETKFADKSKEELEEAAIEVSVAGRIMTKRVKGKVGFTHIQDRFHQLQIYIRKDAIGED
                     AYAVFKLADLGDIIGIKGTIFRTNTGELSVKATEFTLLSKSLRPLPDKYHGLKDVEQR
                     YRQRYLDLITNEESQNRFVMRSKILKYTRDYMDNQGFLEVETPVLHTIAGGAAAKPFI
                     THHNALDMELYLRIALELHLKRLIVGGMDKVYEIGRVFRNEGTSTRHNPEFTMLESYA
                     AYEDYEDVMDLVEGLVSTVCKQVNGTTEITYGEYNVDLTPNWRRIHMADAVKEYVGVD
                     FWNVTSDEEARELAKKHNVPVTEHMTYGHILNEFFETYVEEKLIQPTFVYGHPVEISP
                     LAKKNKEDDRFTDRFELFIVGREHANAFSELNDPIDQRERFEAQMKEREQGNDEAHGM
                     DADFLEALEYGLPPTGGLGIGIDRLVMLLTDAPSIRDILLFPTMKRRD"
     gene            complement(1819..2814)
                     /gene="dusB"
                     /locus_tag="U0290_002791"
     CDS             complement(1819..2814)
                     /gene="dusB"
                     /locus_tag="U0290_002791"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463758.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA dihydrouridine synthase DusB"
                     /protein_id="HEM2302819.1"
                     /translation="MFKIGNVEIKNQVVVAPMAGISNSAFRLTVKEFGAGLVCCEMIS
                     DKGIAYRNAKTLDMLYIDEKEKPLSLQIFGGEKETLVEAAKFVAENTTADIIDINMGC
                     PVNKIIKCEAGAKWLLDPNKVYDMVAAVVDAVDKPVTVKMRIGWDEEHVFAIENALAA
                     ERAGAAAVAMHGRTRVQMYEGSANWDVLRDVKRELKIPFMANGDVRTPEDAKRILEHT
                     GADGVMIGRAALGNPWMIYRTVKFLETGELLPEPEPREKMQTAMLHLNRLVELKGENI
                     AVREFRQHAAYYLKGARGSTRAKVAANQATKQSEMEAILNEFVLQYEEKALAKQD"
     gene            complement(2890..3369)
                     /gene="folK"
                     /locus_tag="U0290_002792"
     CDS             complement(2890..3369)
                     /gene="folK"
                     /locus_tag="U0290_002792"
                     /EC_number="2.7.6.3"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463757.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="2-amino-4-hydroxy-6-
                     hydroxymethyldihydropteridine diphosphokinase"
                     /protein_id="HEM2302820.1"
                     /translation="MAKAFLSIGTNLGERLENLNDALSGLAASDKIKITNVSSVYETD
                     AVGYEDQAAFLNIAVEIETDFPPVDLLDFCLALELELGRVRLFKWGPRLIDIDVLLYD
                     DVKIDTEKLKIPHPYMKERAFVLIPLIEISPEKSNLVDNPAILEEQGVRKIKNQVNW"
     gene            complement(3362..3736)
                     /gene="folB"
                     /locus_tag="U0290_002793"
     CDS             complement(3362..3736)
                     /gene="folB"
                     /locus_tag="U0290_002793"
                     /EC_number="4.1.2.25"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydroneopterin aldolase"
                     /protein_id="HEM2302821.1"
                     /translation="MDKIYLNELVFYGYHGVLAEETKLGQTFRVSLILGLSTKKAGIS
                     DSVDDTVSYAEVYETVKEIVEGTPFKLIEALAEKIATEVLTGYPLLEEVTVKLIKPNP
                     PIPGHYDSVAVEIERKRSDLNG"
     gene            complement(3750..4565)
                     /gene="folP"
                     /locus_tag="U0290_002794"
     CDS             complement(3750..4565)
                     /gene="folP"
                     /locus_tag="U0290_002794"
                     /EC_number="2.5.1.15"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dihydropteroate synthase"
                     /protein_id="HEM2302822.1"
                     /translation="MKKWKRDHLGMVMGILNVTPDSFSDGGKYMQVEEAVARALQMAE
                     DGAAIIDVGGISTRPGFSEVTPEEELNRIIPVIKAVRTKLPDIWISVDTWRAEVAEKA
                     ILAGANMINDQWGAKKEPKIAEVAAKYNVPICLMHNRENTQYDNFLEDVKKDLLESVA
                     IAKAASVPDEHIILDPGFGFVKTPAQNLEVLRRIDEIVALGYEVLLGTSRKSTIGLVL
                     GTTPEDRMEGTGATTVYGFSKGCTITRVHDVLPIARMVRMTDAITGKLDITKL"
BASE COUNT         1267 a         1028 c          820 g         1585 t
ORIGIN      
        1 tagtcaacaa agtcaagatg ttttttcaaa aaaatttaat ttcttgatga gcattttgcg
       61 tttgtttaac tggaacgttt ataaatatat catgttttta tagggattgc aagcatattt
      121 tgagaaaaag tttctctttg gcaaatttgt ttttttctga gaaaaaaaca aaatccagaa
      181 ccgatataat cagctctgga tttttaatta gtcgcggcgt ttcatagttg ggaataatag
      241 gatatcacga atagacgggg catctgttaa tagcattact agacgatcga tacctattcc
      301 aagtccacca gtcggcggta gaccgtattc taaagcttca aggaaatctg catccattcc
      361 gtgcgcttca tcattacctt gctcacgttc tttcatttgc gcttcaaaac gctctctttg
      421 atcaattgga tcgtttaatt ccgagaatgc atttgcatgt tcacgaccaa cgataaataa
      481 ttcaaaacgg tcagtaaaac ggtcatcttc tttgtttttc ttcgctaatg gtgaaatttc
      541 caccggatgt ccgtaaacaa aggttggttg aataagcttt tcttctacgt atgtttcaaa
      601 aaactcatta agaatgtgcc cgtatgtcat gtgctccgtt actggcacat tatgtttttt
      661 agctagttcg cgtgcttctt catcggaagt tacgttccag aaatccactc cgacatattc
      721 ttttacagca tctgccatgt ggatacggcg ccagtttgga gttagatcta cattgtattc
      781 accgtatgtt atttctgttg ttccatttac ttgtttgcat actgtagata ctaaaccttc
      841 taccaaatcc ataacatctt cgtaatcttc gtatgctgca taggattcta acattgtaaa
      901 ttctgggtta tgacgcgtgg aggttccttc attacggaaa acgcggccga tttcgtatac
      961 tttatccatc ccaccaacga ttaggcgttt taagtgtagt tctaaagcaa ttcgtaaata
     1021 taattccata tcaagtgcat tatggtgcgt aataaatggt tttgcagcag caccaccagc
     1081 aattgtatga agcactggag tttctacttc taggaatcct tgattatcca tgtaatcacg
     1141 agtgtatttc aagattttac tgcgcatcac aaaacgattt tggctttctt cgtttgtaat
     1201 taagtctaaa tagcgttgac gatagcgttg ttctacgtct tttaagccat gatatttatc
     1261 aggaagtgga cgtaatgatt tggaaagcaa agtgaattcc gttgctttaa cagaaagttc
     1321 acctgtatta gtacggaaaa tagtcccttt tataccaata atgtcaccta gatccgctaa
     1381 tttgaagact gcataagcat cttcgccaat cgcatcttta cggatataga tttgtaattg
     1441 atggaaacgg tcttgaatat gtgtgaaacc tactttgcct ttcacacgtt tcgtcataat
     1501 acgacctgct acagaaactt caatagcagc ttcttcaagt tcttcttttg atttatcagc
     1561 gaattttgtt tcaatttctt ccgggctgat ggaacggatg aatttttcgc caaaaggatc
     1621 tatgccttct tcgcgtaatg tgtccacttt ttcgcgacgg acgatgagtt ggtcatttag
     1681 ttcttcatga ttctcgttac tcatataggt acactcctat tctattcatt tctacagatg
     1741 tttccattat acgctttttt ggtctggttt ttctagtata aatttaaaaa ttgccccgaa
     1801 atctcgaggc aatcctaatt agtcttgttt cgctaatgct ttttcttcat attgaagaac
     1861 aaattcattt aaaattgctt ccatctctga ttgttttgtc gcttggttag cagccacttt
     1921 cgcgcgagtg cttccgcgag ctccttttag ataataagct gcgtgttgtc taaactcgcg
     1981 aactgcaatg ttttctcctt ttagctcgac taggcgatta aggtgaagca tggcagtttg
     2041 cattttttcg cgtggttctg gttctggaag aagttcgcct gtttctagga atttcaccgt
     2101 gcgataaatc atccatgggt ttccaagtgc agctcgacca atcattactc catctgctcc
     2161 agtatgttct aaaattcgtt tggcatcttc tggtgttctc acgtccccat ttgccatgaa
     2221 cgggattttc agttcgcgtt ttacgtctct aagcacatcc cagttcgcgc taccttcgta
     2281 catttgcaca cgagtacggc cgtgcattgc aacagctgca gctccggcac gttcagcagc
     2341 aagtgcattt tcgatagcaa agacatgttc ttcgtcccaa ccaatacgca tttttactgt
     2401 taccggttta tcaacagcgt ccactacagc agctaccatg tcatacactt tatttggatc
     2461 aagtagccat ttcgctccag cttcacattt gataattttg tttaccggac agcccatatt
     2521 aatatcaata atatctgccg ttgtattttc agctacgaat ttcgcagctt ctacaagcgt
     2581 ttctttctca ccaccaaaaa tttgtaagct caatggtttt tctttttcat caatatatag
     2641 catatcaagc gttttagcat tgcggtatgc gattcctttg tcgctaatca tttcacagca
     2701 aacgagacct gctccgaatt ctttgaccgt taaacggaat gcggaattgg atataccggc
     2761 cattggcgcc acaactactt ggtttttaat ttctacgtta cctattttaa acattaatgg
     2821 taaacccctt cctcttaaat tgcgctagtg atatgttatc ataatcagtt ttttctgcaa
     2881 gtgccaattt taccagttga cttgattttt tattttccga acaccttgtt cttccaaaat
     2941 ggctggatta tctacaagat tgcttttttc tggtgaaatc tctattaatg gaatcagcac
     3001 aaaagcgcgt tctttcatat aaggatgtgg gattttcagc ttttctgtat cgattttaac
     3061 atcatcatat aataaaacat cgatatcaat gagtcgcgga ccccacttaa ataatcgaac
     3121 tcgccccaat tcaagttcga gcgcaaggca aaaatctagt aaatcaactg gcggaaagtc
     3181 cgtttcaatt tctacagcga tatttaaaaa tgccgcttga tcttcgtaac ctactgcgtc
     3241 tgtttcgtat acactagata cgttggtaat tttaatttta tctgaagcag ctaaaccact
     3301 tagtgcgtca tttaaatttt ctaaacgttc gccaaggttt gtaccaattg atagaaacgc
     3361 cttagccatt caaatcactt cttttacgtt caatttccac tgcaacagaa tcataatgtc
     3421 ccggaatcgg aggatttggt ttaataagtt ttacagtcac ttcttctaat agaggataac
     3481 cagttaaaac ttccgttgca attttttcgg caagcgcctc gattaatttg aatggcgttc
     3541 cttccactat ttcttttacc gtttcataaa cttctgcata gctgactgtg tcgtctacgc
     3601 tatccgatat tcctgctttt ttagtagaaa ggccgagaat aagcgatact ctaaacgttt
     3661 gtcctagttt tgtttcttcc gccaaaactc catggtatcc gtaaaacact aattcattta
     3721 aataaatttt atccaactaa agcacctctt tataattttg taatatctaa tttgccagta
     3781 atcgcatctg tcattcgtac catgcgcgca atgggaagta catcgtgtac acgagtaatt
     3841 gtgcaacctt tcgaaaatcc gtaaactgta gttgctccag ttccttccat tctatcctct
     3901 ggagtagttc ctaagacgag accaattgtc gactttctac tcgtaccaag taaaacctcg
     3961 taaccaagcg ccactatctc atcaatgcgt cgtaacactt ctaaattctg cgcaggtgtc
     4021 ttaacaaaac cgaaacccgg atcaagaata atatgttcat ctggcacgga tgccgcttta
     4081 gcaattgcaa cactttctaa taagtctttc ttcacatctt ccagaaaatt atcgtattgc
     4141 gtgttttctc ggttgtgcat caaacaaatt ggcacgttat atttcgcagc tacttccgca
     4201 attttcggtt cttttttggc accccattga tcatttatca tattagctcc tgctaaaata
     4261 gctttttcag ccacttcggc acgccaagta tcaacagaaa tccatatatc cggaagtttt
     4321 gtcctaacag ctttaatgac aggaataatt cgattaagtt cttcctcagg cgttacctct
     4381 gaaaaaccag gccgagtaga tattccacca acgtcaataa ttgctgctcc atcttctgcc
     4441 atttgtaacg ctcgagccac agcttcttcc acttgcatat atttcccgcc atccgaaaaa
     4501 gagtctggcg taacattcag tatccccatg accataccta agtgatccct tttccacttc
     4561 ttcaagccca aacacctctt tccgagattt attatagcag aattcagtga ttttagcgca
     4621 caaaaaaacc gatgcggaaa agggagtaaa ccgcatcggt caaaaaggga gtttgggatc
     4681 ttcattctaa aaagggggga
//
LOCUS       DASDYO010000172         4642 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.173, whole genome shotgun sequence.
ACCESSION   DASDYO010000172 DASDYO010000000
VERSION     DASDYO010000172.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4642)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4642)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4642
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.173"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            105..326
                     /locus_tag="U0290_002795"
     CDS             105..326
                     /locus_tag="U0290_002795"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302823.1"
                     /translation="MAGFIKKYLESKDWTIYQLGNATGLAHQTIRSADSKTVDQISAK
                     NVRLIAEVFKCTPGELLDEFYKIEEEIMR"
     gene            complement(388..1221)
                     /locus_tag="U0290_002796"
     CDS             complement(388..1221)
                     /locus_tag="U0290_002796"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990908.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase"
                     /protein_id="HEM2302824.1"
                     /translation="MAKVAIFGGHNGTSESGASGNGLTEKAVAKEAAQIATAYAKACG
                     HSVVNGFGKPLSERIKYANSENVVAVLELHTNAGGGQGAETLYCEGVASAKEDAITVA
                     KAGSIKGLKNRGAKGDTTTRHGRLGIVRDTKAPALLHELFFIDSASDVAIWKNNKKAI
                     IESITKEWLKRRGLNSVPKTTTSKPAPAKPTTPSKPATSNNTYKNKKLVSKAANLRFY
                     SKPSWADKDVAGTVNKGIGFPTIVEKIKVGTAYQYKVKNSKGATFYITASDKYVELKN
                     K"
     gene            complement(1224..1478)
                     /locus_tag="U0290_002797"
     CDS             complement(1224..1478)
                     /locus_tag="U0290_002797"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601425.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HEM2302825.1"
                     /translation="MKINWIVRFKNPVWVIALVGGLFLIAQSVLYVFGIEWDYNELLN
                     RLITVITSIFALIGIIQDPTTAKIKDSERAQKYNEPGKDE"
     gene            complement(1489..1704)
                     /locus_tag="U0290_002798"
     CDS             complement(1489..1704)
                     /locus_tag="U0290_002798"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysM peptidoglycan-binding domain-containing
                     protein"
                     /protein_id="HEM2302826.1"
                     /translation="MSEQKAKKIKSTSVLHEETTNNEVQTAKTYVVKQDEKLSVIATK
                     LGLSVGELAEKNKLDSYKLKVGQELVL"
     gene            complement(1724..2170)
                     /locus_tag="U0290_002799"
     CDS             complement(1724..2170)
                     /locus_tag="U0290_002799"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302827.1"
                     /translation="MENEKEKIDYVSRAELFEHGIDIKKEMSRKVDKVESKVDKISEE
                     VVELKVLVIPMVTSSKETAQNTQKMADTLERYTRSTTKQLHEHDLEIADVKHSIDNTL
                     KSISDEESEEKHKKFSNVQIITSVLALIGIILGGILSWDWGQFIFK"
     gene            complement(2146..2592)
                     /locus_tag="U0290_002800"
     CDS             complement(2146..2592)
                     /locus_tag="U0290_002800"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990905.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302828.1"
                     /translation="MKTRWKKYINQMLDTNYKEVFALFFLLSVSSYNILTGFFLMTSG
                     DKIVEKSRTYQLMDNLMTIDTWGLLFILSAALILIASFQESNARFINLIFGGTIGAIV
                     LFLYSAASSESAVTNLLPSRYALSACFNLFVAVMGGLELWKTKRKK"
     gene            complement(2780..3121)
                     /locus_tag="U0290_002801"
     CDS             complement(2780..3121)
                     /locus_tag="U0290_002801"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_015987333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302829.1"
                     /translation="MEIYITTNNEGFLTGYSTSECTPGKKIDIDENDAFFQRGFASYK
                     YIANQLIFDENKEKEFQYEKTLQDAIPSAADQLLTTQEALVELYEQNTKLGQQLIDTQ
                     LAMVDMYEANL"
     gene            complement(3127..3855)
                     /locus_tag="U0290_002802"
     CDS             complement(3127..3855)
                     /locus_tag="U0290_002802"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991662.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302830.1"
                     /translation="MSRFNANLARWEATGTKPPDSTIQNGWLAGTKPPADWFNWYFNS
                     TYTALKELQELAALNADLINHTGNTNNPHSVTKAQLGLSDVENFGIASLDEAKAGIAS
                     NKLMTPASVLAAIKEQFNTQNVLFEGEAWPSGSTYKFVNGQKVSDQNLGLIFIWSDYD
                     VLPGSASVANNYNFDFSFIPKIFVNKHAGANVNVPVATNFNASVTSITIKTLYITDTT
                     FAGHDLNSSGLNANDAILRYIIGV"
     gene            complement(3876..4517)
                     /locus_tag="U0290_002803"
     CDS             complement(3876..4517)
                     /locus_tag="U0290_002803"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991663.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302831.1"
                     /translation="MSVKDFLGKLTDAFTKSEKSNIGKLFIIVDQQISALTTALEKTE
                     AWRDIDNAQGKVLNNLGENVGQNRGRATDEVYRVLIRGKVARNASDGTTNKIIHAIAK
                     SLDCNYKDIQIINANDSNSSDEHEPAAIIIKKIPLSALNAVGLSTNQFLQLVNSLKSG
                     GVRVAYINLEGSFSFAKGATEEISDDGFSELDQILGGTLGGLFTPSDDFKLPI"
BASE COUNT         1318 a          962 c          733 g         1629 t
ORIGIN      
        1 gatttaaacg aatcaactaa atttacagtt tatgaagatt gcataaacga tactattaca
       61 atagctcata gctaaaaatt aaatatagag aggaatagtg aaaaatggca gggtttataa
      121 aaaaatactt agaaagtaaa gattggacaa tttatcagct aggtaatgca acgggacttg
      181 cacatcaaac aataagaagt gctgactcaa aaactgtaga ccaaatatct gcgaaaaatg
      241 tgcgtttaat agcagaggtc tttaaatgca ctcctggcga attgttagat gaattctaca
      301 aaatcgaaga agaaataatg cgctaagctt ttgtttagcg tattttttgc ataaaaaaag
      361 cccccgcaca aagcgagggt ttgtttatta tttgttttta agctctacat atttatcact
      421 tgcagtgatg taaaaagtag cgccttttga atttttaact ttgtattgat aagccgtgcc
      481 gactttaatt ttttcgacaa tcgtcgggaa gccaatgcct ttattaacag tgcctgctac
      541 atctttatct gcccaagaag gcttactata aaatctcaaa ttagcagctt tagaaactag
      601 ttttttattc ttataagtgt tatttgaagt tgctggttta gaaggtgttg ttggtttagc
      661 aggagcgggt ttagacgttg ttgtcttcgg aacagaattc aagcctcgtc tttttaacca
      721 ttcttttgtg atcgactcta taattgcttt tttattgttt ttccaaatag ctacatcact
      781 cgcggaatca atgaaaaata gctcatgtag taacgctggt gcttttgtat ctcgcacaat
      841 gcctaaacgc ccgtgacgag ttgtagtatc gccttttgca cctcgatttt ttagcccttt
      901 tatcgatcca gctttggcca cagtaatcgc gtcctctttt gcagatgcaa caccttcgca
      961 ataaagtgtt tctgcacctt gtccgccgcc ggcatttgtg tgtaattcca atactgcgac
     1021 aacattttca ctgtttgcgt atttaatccg ctctgataaa ggtttaccaa atccgttaac
     1081 tacagaatgc ccgcatgctt tcgcgtaagc tgtcgcaatt tgcgcggctt cttttgctac
     1141 tgctttttca gtaagtccat tcccgctcgc tcctgattcg cttgttccgt tgtgtcctcc
     1201 aaaaattgcc acttttgcca tttctattca tcctttccag gttcattata tttttgtgct
     1261 ctttcactat cttttatttt tgctgttgtc gggtcttgaa taattccgat tagagcaaat
     1321 atagaagtaa ttacagtgat cagtctattc aataattcgt tgtaatccca ttcaatgcca
     1381 aatacgtaga gtacggattg ggcaattaaa aaaagaccgc caactagagc gatcacccac
     1441 acgggattct taaaacgaac aatccaattt attttcatga tattcctcct acaatactaa
     1501 ttcttggcca acttttaatt tataagaatc tagtttattt ttttctgcta attcaccaac
     1561 tgataaccct aattttgtag caataactga aagtttttca tcttgtttca ctacataagt
     1621 ttttgcagtt tgaacttcgt tatttgtagt ttcttcatgt aacactgatg tagatttaat
     1681 tttttttgct ttttgctctg acatttccac tcacctccct taatcatttg aaaataaatt
     1741 gtccccaatc ccaacttaga attccaccaa ggataatgcc aattaatgct aagacggaag
     1801 taattatttg aacgttacta aacttcttat gtttctcttc tgactcttca tcgcttatgc
     1861 tttttaatgt attatcgatt gagtgtttca catccgcaat ctccaaatca tgttcgtgca
     1921 actgctttgt tgttgatcgc gtgtatcgtt cgagtgtgtc cgccatcttc tgcgtgtttt
     1981 gagctgtctc ttttgatgac gtgaccatcg gaatcaccag aactttcagt tctactactt
     2041 cctcactgat tttatctact ttgctctcaa ctttatcgac ttttcttgac atctcttttt
     2101 ttatatcaat tccatgctca aacaactctg ctctggacac ataatctatt ttttcctttt
     2161 cgttttccat aattccaagc cccccattac cgcaacaaat agattaaaac atgcgcttag
     2221 agcatagcgg ctgggcaata aatttgtaac agcactctct gagctcgctg ctgaatataa
     2281 gaacaacact atcgcaccta ttgtcccgcc aaaaatcaaa tttataaatc tcgcatttga
     2341 ttcttgaaaa gatgcaatta atatcaaagc agcacttaaa ataaacaaca agccccacgt
     2401 gtcaattgtc atcagattgt ccattagctg gtatgtcctg cttttttcaa caattttatc
     2461 accagatgtc attaaaaaaa atccagtcaa aatgttataa gatgaaactg ataataagaa
     2521 aaataacgca aaaacttctt tgtaattagt atcaagcatt tgatttatat actttttcca
     2581 tctcgttttc attaccccat cgaccccctt cactctgaca aattactctg ctaattcagc
     2641 gcaatctgcg tcaattaaca atgcttttac ttgtgcttgc agtaagcgtg gtacttcttt
     2701 gaatgttttc ttaccgttga gaatcaaatt caaataaatc acagccattt tctattcacc
     2761 tccttaaata acaaataacc tataaattcg cttcgtacat gtctaccatc gcgagttgtg
     2821 tgtcaatcaa ctgctgtcct aattttgtgt tttgctcata taattcaact aatgcttcct
     2881 gcgtagttag taattgatct gctgcgcttg gtattgcatc ttgcaacgtc ttttcatact
     2941 gaaactcttt ttctttattt tcgtcaaata taagttgatt cgcaatatac ttataactag
     3001 caaaacctcg ttggaaaaag gcatcgtttt cgtctatatc aatttttttg cccggcgtac
     3061 attcgcttgt cgaatagcca gttaaaaaac cttcgttatt tgtagtaatg tatatttcca
     3121 tctcgttcac actcctatga tgtagcgtaa aatagcatca tttgcattta agccacttga
     3181 gtttaaatca tgtcctgcaa aagttgtatc agtaatgtaa agagtcttta ttgttatgct
     3241 tgtcacggaa gcgttgaagt tcgttgcaac tggcacattt acgttcgctc ctgcatgctt
     3301 attaacaaaa attttaggaa tgaatgaaaa gtcaaagtta taattattag cgacactcgc
     3361 tgacccaggg agaacatcat aatcactcca gatgaaaatt aaacctaaat tttgatcaga
     3421 aactttttga ccgtttacaa acttgtaggt acttcctgaa ggccatgctt ccccttcaaa
     3481 taacacattt tgcgtattga actgctcttt aattgctgct aaaacacttg cgggagtcat
     3541 tagtttgtta ctagcaatac ctgctttagc ttcgtccaga gatgcaattc caaaattttc
     3601 cacatcactt aaaccaagtt gagcttttgt tacactgtgt ggattatttg tatttcctgt
     3661 atgatttatt aaatctgcat ttaatgcagc aagttcttgt agctccttca gtgctgtata
     3721 tgtgctatta aaataccagt taaaccaatc ggctggcggc ttagtccccg ccaaccatcc
     3781 attttgaatg gtactatccg ggggctttgt tcccgttgct tcccaacgag ctaaatttgc
     3841 attaaatcgt gacataatta tcgcctctct ttcttttaaa ttggtaactt aaagtcatct
     3901 gatggtgtaa ataaaccgcc taaagttcct cccagaattt gatcaagttc cgaaaaaccg
     3961 tcgtcgctta tctcttccgt tgctcctttt gcaaaagaaa aagaaccttc taaattgatg
     4021 tatgctactc taacaccacc agatttcaga ctgtttacta gctgtaaaaa ttgattagta
     4081 cttaagccga ctgcattcag agcagaaaga ggaatctttt taataattat cgcagcaggc
     4141 tcatgttcat ctgatgaatt agaatcgtta gcattgatta tttgaatatc tttataattg
     4201 caatctaatg attttgcgat tgcatggatg attttatttg tggttccgtc acttgcgttt
     4261 cttgcaactt ttccacggat taaaacacga tatacctcat cagtagctcg tcctctgttc
     4321 tggccaacat tttctccaag gttattcagt accttccctt gcgcattatc aatatctcgc
     4381 catgcctctg ttttttcaag agccgtagtt aatgcggaaa tttgctgatc tacaataata
     4441 aataattttc ctatgttact cttttctgac tttgtaaaag catctgttaa tttccctaga
     4501 aaatctttaa cggacattta ttgtcacctc aatatcttcc caacgaatag aagcggcttc
     4561 atcagtatta actaaaatgt cagcagatgc taaattattg atatcttttc ctaactttac
     4621 attcgcaact gtaatcccag ga
//
LOCUS       DASDYO010000173         4566 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.174, whole genome shotgun sequence.
ACCESSION   DASDYO010000173 DASDYO010000000
VERSION     DASDYO010000173.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4566)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4566)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4566
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.174"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1496
                     /locus_tag="U0290_002804"
     CDS             <1..1496
                     /locus_tag="U0290_002804"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="LapB repeat-containing protein"
                     /protein_id="HEM2302832.1"
                     /translation="PLTELSAPTLKYIDLAGNNISDLSLFKKLPNKLPSLEEISVERN
                     NISDVSPLADFASTKIKVFDLDDNHITDLSSLTNNKMPNLQRLYVRSQSFYVETPVVT
                     SSKYEFSLQPSVFGITKPVKITATNPKATIDPITSKITYSAEVMAKRPKYSSNRVSGV
                     TYSWDEDIPFNGSNNLVEYNGTFYKPLTYVEPPQVVSYNSGLTYELGTPLTEQQFLND
                     LNVITDQPTTITTNFDKVLKDVNSVGFYPVTIKASNIEGNTEFTTSVLIKYKPPVITA
                     DAEYTYLVGDKVNATQFRADVNATLTGEGTLRDDFIYKVRLNTAGDYVVTLSSPKSGY
                     YEQDAIPITVIVHVKELLELQIPDEFRMDIDANADSVPISDKKQTLTCYGSSGKAELE
                     VIDRRTVRQGWTITGAMTPFTNSGGDILQTSLKYQSKSPSSSPIYLNTTNQPIEKKQS
                     AVTDPKYDSTIVNLEDSLSMEIEPNDALVNDSYESKITWTLEDAPRP"
     gene            1536..1832
                     /locus_tag="U0290_002805"
     CDS             1536..1832
                     /locus_tag="U0290_002805"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464078.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2302833.1"
                     /translation="MKKMGFILICCLFVCASPFYVKANTDKATSKAGVIFTHDPRKPR
                     TGTDDRSGTFPTKVPPKRLPKTGDTTDFYLVLLGFGFILIAKKGYFKEVREEIR"
     gene            1876..2718
                     /locus_tag="U0290_002806"
     CDS             1876..2718
                     /locus_tag="U0290_002806"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WxL domain-containing protein"
                     /protein_id="HEM2302834.1"
                     /translation="MTSRTVKVTTASLLALGLIVAPVLSGDFASAATSVTKDSKGIVK
                     FDKSTTPDPDPVNPDPVDPDPVIPDPTDPPVGTDGLWILAVSDWDFGTHNVSSLSSGA
                     LNVHAADDTISTYVDANGNGQQDLPGEVSVTKKVTPYAQISDVRGTNTGWTLSVTGSA
                     FKDSSTPAKTIPGAELTIPKSTVSSATSTAQAPTGYDSVTISMTGGAAVPVMAAKDMQ
                     TATPTNFNDDQGMGTWTDSFGSQAVSATDTSKPKLSIPKNVVVADGTYQSTLTWTLSD
                     TPAV"
     gene            2794..3825
                     /locus_tag="U0290_002807"
     CDS             2794..3825
                     /locus_tag="U0290_002807"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF916 and DUF3324 domain-containing protein"
                     /protein_id="HEM2302835.1"
                     /translation="MKKICAIIFACVLAILCFPGQQAYATENSSFSVKAILPDNQASS
                     VTYFDLQMKPKQKQSLNVEITNQSKEEITVNCVANTAVTNEMGYVDYSIPNTKPDKTL
                     KYPFADMVKESVSEVTLKPNETKIWTAAIQMPAENYDGIILGGLHFQEKKEEDKEKDS
                     SENDVQIKNEYAYVIGVKLTEKTTVVKPELELNQIKPATRNYRNVVEMNLQNTKATLV
                     GGLAVDAKIYKKGSEKVLHESKRTDLSMAPNSNFNYSVDWENQELKPGKYKVHLVAKN
                     KEDKWEWTKEFTISSDQAKKANKVALGLEKDYTWMYIVGGVLLFILLIIATYFVGKRA
                     AKKKQENEK"
     gene            complement(3882..4517)
                     /locus_tag="U0290_002808"
     CDS             complement(3882..4517)
                     /locus_tag="U0290_002808"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464081.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CBS domain-containing protein"
                     /protein_id="HEM2302836.1"
                     /translation="MLIKNLCIPKINLTTVPGDATLQEAIHLLEESGYRCVPVLDEKG
                     EKFLGNIYKMHIYKHAANGGSLSDPVMSLIKNATKHICVNASFFEVFFTIKELPYIAV
                     LNEQGNFYGILTHGKLLGLLQDGWNVKTTSYVLTIATGEVQGALTKITKIIDRYSSIS
                     SLITLDNQTEDFIRRVLVSLPVGVTEDKKNEIVSHLERKGLRVVETEKIEK"
BASE COUNT         1556 a          851 c          881 g         1278 t
ORIGIN      
        1 cacctcttac tgaactgagc gcaccaacac ttaaatatat agacttagcg ggtaataata
       61 tttctgattt atctcttttt aaaaagcttc ctaataaatt acctagttta gaagaaatat
      121 ctgtagaaag aaataatata tcagatgttt caccgcttgc tgattttgcc agtactaaaa
      181 taaaggtgtt tgatttggat gataatcata ttactgattt atctagtctt acaaataaca
      241 aaatgcctaa tttacagcga ttatatgtta ggagccaaag tttctatgtg gaaacgccgg
      301 tagttacttc tagtaagtat gaattttctt tacaaccatc tgtttttgga ataaccaagc
      361 cggttaaaat aactgctact aatcccaaag caactattga tcctattact tctaaaatta
      421 catattcagc agaagtaatg gccaaaagac cgaagtatag ctctaatcgg gtttcaggag
      481 ttacctattc gtgggacgag gacattccgt ttaatggtag caataatcta gttgaataca
      541 atggtacgtt ttacaagcca ttaacttatg ttgaaccgcc ccaagttgtg tcttacaatt
      601 caggccttac ttatgagcta ggtacaccac ttacggaaca acaatttcta aacgatctca
      661 atgtgataac agatcaacca acaacgatta ctacaaattt tgataaggtg ctaaaagatg
      721 tgaattctgt aggcttttac cctgtcacta tcaaagcttc taacatagaa ggaaatacgg
      781 agttcactac ttcggtactg attaagtata agccaccagt tataaccgca gatgcagaat
      841 acacctattt agtaggagat aaagtgaatg ctactcaatt tcgagcagat gtaaatgcaa
      901 ctttgacagg tgaaggaaca ctaagagatg actttatata taaagtaaga cttaatacgg
      961 cgggagatta tgttgtaact ctttcttcac ctaaaagtgg ctactatgag caagatgcaa
     1021 tacctattac agtcattgtt cacgtaaaag aacttttgga attgcaaatc ccagatgaat
     1081 ttcgaatgga tatagatgca aatgcagatt ccgtaccaat ttcagataag aaacaaacac
     1141 ttacatgcta tggttcgtct ggaaaggctg agttagaggt gatcgataga cgaactgtgc
     1201 ggcaaggctg gacgataacg ggtgcgatga cgccatttac caatagcggc ggcgatatac
     1261 tacaaacttc gctaaaatat caaagcaaat cgccttccag tagtccgatt tatttaaata
     1321 cgacgaatca acctatcgaa aagaaacaat cagctgtgac agacccaaaa tatgattcta
     1381 ccatcgtcaa tctggaagac agtttatcca tggaaattga gccaaatgat gcgctagtga
     1441 acgattccta tgagtcgaaa atcacctgga cactagaaga tgcgcctcga ccataataag
     1501 caatcagcta catcaaacaa aaggagctat ctaaattgaa aaaaatggga ttcattttaa
     1561 tctgttgttt atttgtgtgc gcctcgccgt tttatgtaaa agcgaatacg gataaggcga
     1621 caagtaaagc gggagtgatt ttcacgcatg acccccgaaa accaagaact ggaacagatg
     1681 acagaagcgg cacttttccg accaaagttc ctccaaaaag actgccgaaa acaggagata
     1741 caactgattt ttatcttgtt ttactagggt ttggtttcat tttaatcgcg aaaaaaggct
     1801 attttaagga ggtgagggaa gaaatccggt gaaactgcac gacaaaaaaa ggatatcaga
     1861 aagaggagaa taataatgac aagtagaaca gtaaaagtaa caacagcgag tttattagca
     1921 ttaggtttga ttgtggcacc agtactttct ggagattttg cttcagctgc cacttccgta
     1981 acgaaagatt ccaaagggat tgtaaaattt gataaaagca ccacgccaga tccggatcca
     2041 gtaaatccag atccagttga tccagaccca gttattccgg atccaactga tccacccgta
     2101 ggtacagacg gactttggat tttagccgta tctgactggg attttggtac gcataacgtt
     2161 tctagcttat cttcaggtgc gttaaatgta catgcagcgg atgatacgat ttctacttat
     2221 gtagacgcaa atggtaatgg acaacaagat ttgccagggg aagtttcagt aactaagaaa
     2281 gtaactcctt atgcacaaat tagtgatgtt cgtggtacta atacaggttg gacactttcc
     2341 gtgacgggta gtgctttcaa agattcttct acaccagcaa aaacgattcc aggtgcagag
     2401 ctaactattc ccaaatcgac tgttagttca gcgacttcta ccgctcaagc gccaactgga
     2461 tatgatagcg taacaatttc aatgactggc ggcgcagcag ttccagtaat ggcagctaaa
     2521 gatatgcaaa cagctacacc gaccaacttt aacgatgacc aggggatggg cacatggaca
     2581 gatagctttg gttctcaagc agtgtccgca acagatactt ccaaaccaaa attatccatt
     2641 ccgaaaaacg tcgttgtcgc tgatggaact tatcaaagta cattaacttg gactttaagc
     2701 gatacaccag cagtttaaca tttttaagag aaaacttcat ttttggatgt tgttttctct
     2761 ttttacattg agcaattagg aggaaagaga cacttgaaaa aaatatgcgc tatcatcttt
     2821 gcttgtgtac tagctattct ttgttttcca ggacagcagg cgtacgcaac agaaaatagt
     2881 agtttttccg taaaagcaat tctccctgac aatcaggcat ctagtgtgac ctatttcgat
     2941 ttacaaatga aaccaaagca aaaacaaagt ttaaatgtag aaattacgaa ccagagtaaa
     3001 gaagaaatca ccgttaattg cgttgccaat acagccgtta ccaatgagat gggctacgtg
     3061 gattattcca taccaaatac gaaaccagat aaaacgttaa aatacccctt tgcagatatg
     3121 gtgaaggaaa gtgtctctga ggttacactt aagccaaacg aaaccaaaat ttggacagcg
     3181 gctattcaaa tgcccgctga aaactacgac ggtattattt taggaggatt acattttcaa
     3241 gaaaagaaag aggaggataa agaaaaagac tccagcgaaa acgatgtcca aattaaaaat
     3301 gaatacgcct acgtcattgg tgtcaaatta accgaaaaaa cgaccgtcgt aaagccagaa
     3361 ttagaattaa atcaaattaa accagcgacc agaaattacc gaaatgtagt agaaatgaat
     3421 ttgcaaaata caaaagcgac cttagttggt ggactggccg tggatgcaaa aatatataag
     3481 aaaggcagcg aaaaagtttt acatgaatca aaacgcacag atttatccat ggcgccaaat
     3541 tccaatttta attatagtgt agattgggaa aatcaagagt taaaaccagg taaatataaa
     3601 gtgcatttag ttgctaagaa caaagaagat aaatgggagt ggacaaaaga attcactatc
     3661 tcttctgatc aagcaaaaaa agccaataaa gtagctcttg gactggagaa agactacacg
     3721 tggatgtata tcgtaggtgg agtattgctt ttcattcttc ttattatcgc aacttacttt
     3781 gtcggcaaac gagcagcaaa gaaaaaacag gaaaatgaaa aatagcctaa cgaaaaaaca
     3841 gcttgaaaat gagaatttac ctcgttttca agctgttttt attatttttc gattttttct
     3901 gtttctacga cacgaagtcc tttgcgttct aagtgggaaa caatttcgtt tttcttatct
     3961 tctgttacgc caactggtaa ggaaacaagt acgcggcgaa tgaaatcttc cgtttgattg
     4021 tctaaagtga tcaagcttga gatgctcgaa tagcgatcga taattttagt gattttagtt
     4081 aaggcccctt gaacttcgcc agtcgcaatc gtaagaacat agctagttgt tttcacattc
     4141 cagccatctt ggagtaaacc aagtaatttt ccgtgcgtta aaattccata aaagttacct
     4201 tgctcattta aaaccgcaat atatggaagc tctttgattg taaaaaagac ttcaaagaaa
     4261 gatgcattga cgcaaatatg cttcgtcgca tttttaatta agctcattac tgggtcgcta
     4321 agactaccac cgttagctgc gtgtttgtaa atatgcattt tataaatatt acctaagaat
     4381 ttttcacctt tttcatctaa tacaggaaca cagcgataac cagattcttc aagtaaatgg
     4441 atagcctctt gtaaagttgc atctccaggg acggttgtta aatttatttt agggatacaa
     4501 aggtttttta tcaacatgtt cttcactcca ttcttcttcc ctttcatttt aacgtaaagt
     4561 aggact
//
LOCUS       DASDYO010000174         4479 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.175, whole genome shotgun sequence.
ACCESSION   DASDYO010000174 DASDYO010000000
VERSION     DASDYO010000174.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4479)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4479)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4479
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.175"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..695
                     /locus_tag="U0290_002809"
     CDS             <1..695
                     /locus_tag="U0290_002809"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464361.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="diguanylate phosphodiesterase"
                     /protein_id="HEM2302837.1"
                     /translation="LLLQNEYDTKSGDLVKKEIVAIKKTKNLLEDLTTHLLCVTNQTE
                     YGKFINWYEMEVKKVLQVYPNQHFIVKISFQQLYFRETMLLLENLQKDSRRITIELVG
                     DSQISPNSKEHFSAEDSDAFLKGKLKMLRKWHYFISKHIESGAIEQTLIFTPYIDELK
                     YSLTQKSKLLNNITELKFFLSFWKNWAELRFVDFLVLVDEKNEFVSYVLLPDELNVRC
                     KMYENFGGMVSE"
     gene            688..1692
                     /locus_tag="U0290_002810"
     CDS             688..1692
                     /locus_tag="U0290_002810"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464362.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2302838.1"
                     /translation="MSKNVKKIVITILALIMTVGLASGFIAPIKASAATNNFTVKVEY
                     VDADGAEIAPSDTLTDYHYVSTPKDIPGYKLREIPHNATGNITDTGIIVRYIYDKIID
                     VSYVDETGKDLLPVVEIIDSEAAILETIPDYTFVRKDISIDGSHIIFRYKKNISTIPE
                     FGKPNQVTVNYLDENNTSIAPSLYLSGLFNEAYNVPMKKIKGYTLLKYDSEILGVFTE
                     SPQTINIIYQKKAPEQAPSMEPLPDTAVPENPPVEKAKIKKSKIETTEKRTISKAKIE
                     PKALKLTKVEQKKQETKDRLPKTGDSSVNLLITCLGIIAISCGVYLLVQQSQKRCRKE
                     "
     gene            complement(1735..2148)
                     /gene="psiE"
                     /locus_tag="U0290_002811"
     CDS             complement(1735..2148)
                     /gene="psiE"
                     /locus_tag="U0290_002811"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464363.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphate-starvation-inducible protein PsiE"
                     /protein_id="HEM2302839.1"
                     /translation="MKRLEKISSIVPILLRITLNLALIMVGFTLVAFLIREAFTIFNN
                     IFFLDTDVSYYYMTQDILTFFLYFEFIALIVKYFESHFHFPLRYFIYIGITAIIRFII
                     VDHSSATSTLILSGAILLLVAALFLANTKMLKREG"
     gene            2237..3958
                     /locus_tag="U0290_002812"
     CDS             2237..3958
                     /locus_tag="U0290_002812"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014092266.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302840.1"
                     /translation="MLKRFFSYYKPYRTLFIIDFGCAVLAAILELAFPVAVNHVIDTL
                     LPGKDFGLIITAALALLFFYILNTFMQYIVTYFGHMLGLNIETDMRRDLFSHLQKQPF
                     GFYDNQKTGKLMSRMTTDLFEIGEVAHHGPEDIFISIMSLFGAFFLMLNINVKLAIST
                     FILVPILTVLIVYFNKRMTKVTTGIFKDLGNFNAGVENAISGVRVVQAFANEPHEKGR
                     FRVLNQAYRQSKLMFYKVMGLSFSFNYFLMRLISLFALLFGAYFTINGEISYGEFVGF
                     ILLTNVFIRPIEKINNVIESYPKGFAGFKRFLEVMDTEPAIQDEKDAKPAKAFRGDIA
                     YNHVSFEYSDGKNVLNHINLSIKAGETVAFVGPSGAGKTTICNLLPRFYDVSAGEITI
                     DGENIKRFTLPSLRAQIGVVQQDVFLFSGTVRENIAYGKLDASDEEIEHVVKLAHLSK
                     VVEEMPDGLDTIIGERGVKLSGGQKQRLAIARMFLKNPPILILDEATSALDTETEQVI
                     QASLEELAEGRTTLIIAHRLATIKHADRIIVVNETGIAETGTHNELLAQDNGAYKRLY
                     DAQFNTI"
     gene            4251..>4479
                     /locus_tag="U0290_002813"
     CDS             4251..>4479
                     /locus_tag="U0290_002813"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464364.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hexose-6-phosphate:phosphate antiporter"
                     /protein_id="HEM2302841.1"
                     /translation="MSLFSLKRKNHFVPLEIQRQQWFKHFIVAFMSVFICYLTVYLLR
                     NNFKAAQTLLIEQNHFSTTELGMIGLAFSVMY"
BASE COUNT         1544 a          731 c          871 g         1333 t
ORIGIN      
        1 aattactact tcaaaatgag tatgatacta aaagtggtga tttagtcaaa aaagaaatag
       61 ttgctattaa aaaaactaaa aatctcttgg aagatctaac tacgcatttg ttatgtgtta
      121 caaatcaaac agagtatgga aaatttatca attggtatga aatggaagtt aaaaaagttc
      181 tacaagttta tcccaatcag cactttattg ttaaaatttc ctttcaacaa ttatattttc
      241 gggaaacaat gctgttgctt gagaatttgc agaaagatag ccggcgaata acgattgaac
      301 tagttgggga tagtcagatt agccctaatt caaaggaaca tttttccgca gaagacagtg
      361 acgctttttt gaaagggaag ttgaaaatgt tgagaaagtg gcattatttt atttcaaagc
      421 atattgaaag tggtgccatc gaacaaacgc tgatttttac gccctatatt gatgaattga
      481 aatatagttt aacgcaaaag tcgaagctct taaacaatat tacagaatta aagttttttc
      541 tatcattttg gaaaaactgg gccgaacttc gatttgttga ttttttagtt ttagtagatg
      601 aaaaaaacga atttgtatcg tatgtacttt taccagatga attaaatgta cgttgcaaaa
      661 tgtatgagaa ctttggagga atggtcagtg agtaaaaatg taaaaaaaat agtgataaca
      721 atcttagcat taataatgac agtaggattg gcgagtgggt ttatcgcacc tataaaagca
      781 agtgcagcca caaataattt cacggttaaa gtggaatatg ttgatgcaga cggagccgag
      841 attgctcctt cggatacatt aactgattat cattatgtat ctacaccaaa agatattcct
      901 ggctataaat taagagaaat acctcataat gcgacaggca atatcacaga tactgggatt
      961 atcgtgcgtt acatatatga taaaataatc gatgtaagct acgtagatga aactggcaaa
     1021 gacttattac cagtagtaga aatcatcgat agcgaagcag ctattttaga gacaatacct
     1081 gactatacat ttgtaagaaa agacattagc atagatggct cgcatatcat ttttcgctat
     1141 aaaaagaata tttctaccat tccagagttc gggaaaccga atcaagtcac tgtaaattat
     1201 ctggatgaaa acaatacttc aattgccccg tcattatatt tgagcggact tttcaacgaa
     1261 gcatacaatg ttccgatgaa aaaaattaaa ggttatactt tattaaaata cgattcggaa
     1321 attcttggcg tttttaccga atcaccacaa acaatcaaca tcatttatca aaaaaaagcg
     1381 cctgagcaag caccaagcat ggaaccatta cctgatacag ctgttccaga aaatccgcca
     1441 gtagaaaaag caaaaataaa gaaatcaaaa atagaaacca cagaaaagcg aactatatca
     1501 aaagcaaaaa tcgaaccaaa agcattgaaa ttaaccaaag ttgaacaaaa aaaacaagag
     1561 acgaaagatc gcttgccaaa aacaggtgat agctcggtaa atttattaat tacgtgcctc
     1621 ggaattattg ccatatcgtg tggcgtttac ttactcgtac aacaaagcca gaagcgttgt
     1681 cgtaaagaat agaaaataaa aacaagcaat cctattttcg gattgcttgt ttttttaccc
     1741 ttctcgttta agcatctttg tattagctaa aaacagtgca gcgacgagta aaagaatcgc
     1801 gcctgaaagt attagcgtcg aagttgcgct agagtggtcg acaataataa atcgaataat
     1861 cgctgtgata ccaatataaa tgaaatagcg cagcgggaaa tgaaaatgag attcgaaata
     1921 tttaacaatc agcgcaataa attcaaagta aaggaaaaac gtcaaaatat cttgtgtcat
     1981 ataatagtaa gaaacgtctg tatctaaaaa gaaaatatta ttgaaaatcg taaatgcctc
     2041 tctaattaaa aaagcaacaa gggtaaaacc gaccataata agcgccagat ttagggtgat
     2101 tcgtagcagg atgggaacaa tagaagaaat tttttctaat cgtttcatca gttgcctcct
     2161 ttccaaaaac gatatcgctt ttttagttat tttacactat aatgggaacc atgactattt
     2221 ttaagggggg attgttattc taaaacgctt ttttagttat tataagccgt atcgaacact
     2281 ttttatcatt gattttggtt gcgccgtctt agcagctatt ttggagctgg cttttccagt
     2341 cgcggttaac cacgtgattg atacattact tccaggaaaa gattttgggc tgattattac
     2401 tgcggcactt gccttattat tcttctacat acttaacact tttatgcagt acattgtcac
     2461 ttattttggc catatgcttg gtcttaacat agaaacagat atgcgtagag atttattcag
     2521 tcatttgcaa aaacaaccat ttggctttta cgacaatcag aaaaccggaa aattgatgtc
     2581 acgaatgacg actgacttat ttgaaattgg tgaagtagcg catcatggtc cagaagatat
     2641 ttttatttcg attatgtccc ttttcggtgc atttttctta atgttgaata tcaatgtgaa
     2701 attagcgatt tcgacgttta ttctagtacc gattttgact gtattaattg tttacttcaa
     2761 caaacgaatg accaaagtaa caaccgggat ttttaaagat ttagggaatt ttaatgctgg
     2821 agtggaaaat gcaattagcg gggtgcgtgt cgtgcaagca ttcgccaacg aaccacatga
     2881 aaaagggcgt tttagagtgc tcaaccaagc gtatcgtcag tcaaaattaa tgttctacaa
     2941 agtgatgggc ttgagttttt cgtttaacta ttttctgatg cgattgatta gtttatttgc
     3001 ccttttattc ggagcttatt ttacgattaa tggcgaaata tcatacgggg aatttgtcgg
     3061 atttatcttg ctaacaaacg tgttcattcg accaatcgag aaaatcaaca acgtaatcga
     3121 aagctatcca aaaggctttg cagggtttaa gcgattccta gaagtcatgg atacagaacc
     3181 agcaatccaa gacgaaaaag acgcaaaacc agccaaggcg ttccgcggtg acattgctta
     3241 caaccatgta tcttttgaat atagcgatgg gaaaaatgta ctaaatcata taaatctttc
     3301 tatcaaagcc ggcgaaaccg ttgcctttgt tgggccaagt ggagctggga aaacgacgat
     3361 ttgtaatttg ttaccacgtt tttacgatgt gtcagctgga gagattacaa ttgacggtga
     3421 aaatattaaa cgatttactt taccgtcttt acgagcacaa atcggtgtcg tgcaacaaga
     3481 tgtctttttg ttttccggta cagttcgcga aaatattgcg tacggaaaat tagacgctag
     3541 cgatgaagaa atcgagcatg tcgtgaaact tgcccatctt tccaaggtag tagaagaaat
     3601 gccagatggt cttgacacca tcattggtga gcgcggagtc aaactttctg ggggacaaaa
     3661 acaacggtta gctattgcgc gaatgttttt gaagaaccca ccgattttaa ttttagatga
     3721 agcgacgtca gcacttgata cggaaacaga gcaagtgatt caagcctcgc tagaagagtt
     3781 agcggaagga agaacgactt taattatcgc gcacagactc gcaacgatta agcatgccga
     3841 tcgaattatc gttgtaaatg aaacgggcat cgcagaaact gggacgcata atgagctttt
     3901 agcgcaagat aatggtgcct ataagcgatt atatgatgct cagtttaata cgatttaacg
     3961 agtaaaaact ttcgggtttt aggaaatatt ttactaaaag gaaagcagga attatttggg
     4021 aaccccaaga taattcctgc tttttgtttt ctgcatgata acaagtgtta atgacggaaa
     4081 tagaatttct gttttatatt tttagcagcg caaaagggga aataaagcat ttggacagca
     4141 gaggtgattg ctttagaaaa attgatagac tttatatgga aacgtttgcg taataatgct
     4201 catcgcattc taaatttgga atgaaaatta cacttgaaag gaaatttata atgtcattat
     4261 tcagtttaaa aagaaagaac cattttgttc cactagaaat tcaaaggcaa caatggttca
     4321 aacactttat cgttgcattt atgtctgtat ttatttgtta tctaacggtc tatcttctaa
     4381 ggaataactt taaagcggct cagacattgt taattgagca gaaccatttc agcaccacag
     4441 aactaggaat gattggttta gctttttctg ttatgtacg
//
LOCUS       DASDYO010000175         4404 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.176, whole genome shotgun sequence.
ACCESSION   DASDYO010000175 DASDYO010000000
VERSION     DASDYO010000175.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4404
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.176"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..437
                     /locus_tag="U0290_002814"
     CDS             <1..437
                     /locus_tag="U0290_002814"
                     /inference="COORDINATES: protein motif:HMM:NF018914.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DnaD domain protein"
                     /protein_id="HEM2302842.1"
                     /translation="NNSINNNSNSAAAEDSNNNLTSELEERERRAAAEIPIDLNVSPL
                     ITYEGSLGLLNTFQREDLFHWESELSRPIVNFAIYHASMRGARGYPLIKDILCKWHQN
                     NIKNLSEAVAFEKEQKSKAQIKGGAYVRGGKRTNQQNQNFDW"
     gene            385..1206
                     /locus_tag="U0290_002815"
     CDS             385..1206
                     /locus_tag="U0290_002815"
                     /inference="COORDINATES: protein motif:HMM:NF013828.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding protein"
                     /protein_id="HEM2302843.1"
                     /translation="MSVEENEPINKIKISTGDREPLTFGNIQFVENRTCRDCGNEYPV
                     YSRNGIEADFCINCDNNRVQKDMQKRYEETERQRPNRLMKEFSFVPDEIKSQSFKTFK
                     PETTEEHEALQQVLHFVKSFPNDQTLVLAGSVGTGKTHLAYSAAREIIKKGYIVIFVT
                     VPELLESIRSTFKNADLSETEVKRIYKEADLLILDDIGAEYIKDYGNGSWAAEIIFDI
                     VNARTTKSTIYTTNLAGKDIEEHYGGIQGKRIVSRMKKNSTAIKLTGKDRRTSEW"
     gene            1206..1397
                     /locus_tag="U0290_002816"
     CDS             1206..1397
                     /locus_tag="U0290_002816"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731484.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302844.1"
                     /translation="MVEATQVEYIGFSGPEAAHVIIWKLLDKKIAKTMCYTAEEVEEQ
                     LKLHAWKFDGYEVLSDENF"
     gene            1384..1605
                     /locus_tag="U0290_002817"
     CDS             1384..1605
                     /locus_tag="U0290_002817"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731485.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302845.1"
                     /translation="MKTFKIWLKIYWISGLCQNRSFEVEARTFKEAFDNAEKMVPRKK
                     VKKIKHLQGDIVGYIFEPPTKGANNFETN"
     gene            1562..1801
                     /locus_tag="U0290_002818"
     CDS             1562..1801
                     /locus_tag="U0290_002818"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990860.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302846.1"
                     /translation="MSRQRKELIILKRIEYVEIIKKIPGTPFRLGGIYEIERMGSANA
                     RVRINNSIYQVPKEALQVVEQVERERWEENDKIHD"
     gene            1782..2219
                     /locus_tag="U0290_002819"
     CDS             1782..2219
                     /locus_tag="U0290_002819"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990861.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RusA family crossover junction
                     endodeoxyribonuclease"
                     /protein_id="HEM2302847.1"
                     /translation="MIKFTINIPPHPQERPRFRNAGNFVQTYDPPKSKEYKKKIANVA
                     KMYAPGTPISTPIKIKLIFFVPIPKSKSKAWKQRAVLGQEFPAVRPDIDNFTKAVLDA
                     LNGIMFSDDGKIVELIAYKRYSDLPRTEVSITELVSEVQTKLF"
     gene            2240..2860
                     /locus_tag="U0290_002820"
     CDS             2240..2860
                     /locus_tag="U0290_002820"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990862.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302848.1"
                     /translation="MINCYAEVRNVQVKPNDTVEIKLVVGVEELSGQNEELMKLVGRE
                     VNTSLESNQISYREKVDPETREPVLKYIVHKDGTVAMYSQEKLDLELEELPEEERSSV
                     INKSEIDEYILACDSGPMTIPGGIFEGKEVLQKLSEGEDIEDLAKFYGTPVKEMQDTL
                     DEYRKFVAAKAKAWQEWKNNSEQTADSEEQESENDGQATLEFETEE"
     gene            2901..3281
                     /locus_tag="U0290_002821"
     CDS             2901..3281
                     /locus_tag="U0290_002821"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731489.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302849.1"
                     /translation="MPSEELNLFDLMDYYPEQAAKKKRKEEALKPIKTHRNDRIDYPA
                     ARAEIERILGKKVTTVCGYYDHPINKELRWIFNFEIGFCYINDKCQLYEMQPGLEGFR
                     YRGKVHEEVFYNADDRKRATTTIE"
     gene            3241..3417
                     /locus_tag="U0290_002822"
     CDS             3241..3417
                     /locus_tag="U0290_002822"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731490.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302850.1"
                     /translation="MQTIEKELLQRLSDRRIGVQHQIASLVHTEKCTLLEALKMTDKE
                     IDSTFNEMRMELDS"
     gene            3429..3851
                     /locus_tag="U0290_002823"
     CDS             3429..3851
                     /locus_tag="U0290_002823"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990865.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302851.1"
                     /translation="MTTVEKLSIREQALNKMLTEMNEAHSGAEDVIHNWLCNQVEEAI
                     FEGIMKDDRSISGAVKYCSSRASKHQAEGVAMIDDKTVFSWVRKYFISEKVSKSIVKA
                     TVKATATKPEKTKVKAKKKPKKTTAQEGYEQLDLLDFL"
     gene            3848..>4404
                     /locus_tag="U0290_002824"
     CDS             3848..>4404
                     /locus_tag="U0290_002824"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302852.1"
                     /translation="MKREAQNYIDNKLKPPKAFFEWCFSQIPTYKWSNKKETILASNR
                     KNCSVIEQKLRKNSRLTFFGKLNVFGIVLVTSKRIEIQSYAFWNRVVEGKEIIEFDLV
                     NFEQFAEGEHVKVASSDGKMWFGLIPVYGGMSGGPYSMIQLFENDWKEKIRSKSELKY
                     LEIPHLDFKEIETIYKYRVEIEFLQ"
BASE COUNT         1646 a          663 c          978 g         1117 t
ORIGIN      
        1 ataataacag tattaataat aacagtaata gtgctgctgc agaagatagt aataataact
       61 taactagtga actagaagaa agagagcggc gagcagcagc agaaatccct attgatttaa
      121 atgtatctcc cttaatcacc tacgaaggta gtctaggtct attaaatact tttcaaagag
      181 aggatttatt tcactgggaa tcggagttaa gtcgaccgat agtcaatttt gctatttacc
      241 acgcaagtat gagaggcgca cgtgggtatc cgttgataaa agacatcctg tgcaaatggc
      301 atcaaaataa tataaaaaat ctttcagagg ctgtcgcatt tgaaaaggaa caaaaaagta
      361 aagcacaaat aaaaggtggt gcttatgtcc gtggaggaaa acgaaccaat caacaaaatc
      421 aaaatttcga ctggtgatag agagccactg actttcggaa acatccaatt tgtagaaaat
      481 aggacttgta gggattgtgg aaatgaatac cccgtttact caagaaatgg cattgaagca
      541 gatttttgca tcaattgtga caataatcga gttcaaaaag atatgcagaa acgctacgaa
      601 gagacagaga gacagcgacc taacagactg atgaaagaat tttctttcgt tcctgatgag
      661 atcaaatcgc aatcttttaa aacatttaaa ccagaaacga cagaggagca tgaagctttg
      721 caacaagttc ttcattttgt aaagtcattt cctaatgatc agactttagt gctagctggt
      781 tctgtaggaa ctggtaaaac tcatttagca tattctgcag caagagaaat cataaaaaaa
      841 ggttacatcg tcatttttgt taccgttcca gaattgttgg aaagtattcg ttccactttt
      901 aaaaacgcag acctttcaga aacggaggta aaacgaattt ataaagaagc tgatttactg
      961 attttagacg acattggggc tgaatatatt aaagactacg gaaacggtag ctgggcagca
     1021 gaaataatat tcgatattgt gaacgctcgg acaacgaagt cgacgattta cactacaaat
     1081 ttggcaggaa aagatattga ggaacattac ggtggcattc aaggaaaacg aattgtatcc
     1141 cgtatgaaga agaatagtac agcaataaaa ttaactggca aggataggag gacaagtgaa
     1201 tggtaatggt tgaagcaaca caagtagaat atattggctt ttctggtccg gaagcggcgc
     1261 acgttattat ctggaagcta ttagacaaga aaatagcgaa aacgatgtgc tacacggccg
     1321 aagaagtcga agagcagcta aagctgcacg cttggaaatt tgatggttat gaggtcttga
     1381 gtgatgaaaa cttttaagat ctggctgaaa atctactgga tttctggcct ttgtcaaaat
     1441 agaagttttg aggtagaagc tagaactttc aaagaagcat ttgataatgc agaaaaaatg
     1501 gttccacgga aaaaagtgaa gaaaataaaa catctgcagg gagatattgt aggttacatt
     1561 tttgagccgc caacgaaagg agctaataat tttgaaacga attgagtacg ttgaaatcat
     1621 taaaaaaatt cccgggacac cttttagatt aggagggata tacgaaatag aacgaatggg
     1681 ttcagcaaat gcacgtgtga gaattaacaa cagtatttat caggtgccaa aagaagcact
     1741 acaagtagtt gaacaagtgg aacgtgaacg gtgggaagaa aatgataaaa ttcacgatta
     1801 atattcctcc acatccacaa gaacgaccgc gttttagaaa tgcaggcaat ttcgtacaaa
     1861 cgtacgaccc gcctaagtca aaagagtaca aaaagaaaat agcaaatgtg gcaaaaatgt
     1921 atgcgccagg aacgccaata agcacgccta ttaaaataaa attaattttc tttgtgccaa
     1981 tccctaaatc aaaatctaaa gcctggaagc agcgagcggt ccttggccaa gagtttccag
     2041 ctgtaaggcc agatattgat aatttcacaa aggctgtgct agacgcatta aacggcatca
     2101 tgtttagtga cgatggaaag attgttgaat taatcgctta taagagatat tcagacttac
     2161 ctagaacgga agttagcata acagaattag tttcagaagt tcaaacgaaa ttattttaaa
     2221 aaaattggag gaacaagaaa tgattaattg ctacgcagag gttagaaatg tacaggtgaa
     2281 accgaatgac acggttgaaa ttaaactagt tgttggtgta gaagaattat ctggccaaaa
     2341 cgaggaactt atgaagctcg taggtagaga agtaaatact tctctcgaaa gcaaccaaat
     2401 atcttaccgt gaaaaggttg atccagaaac acgagagcct gttcttaagt atattgttca
     2461 caaggacggg actgtagcga tgtactcgca ggaaaagctt gatttagaat tagaagaatt
     2521 gcccgaagaa gagcgttcta gcgtgataaa caaatcagag attgatgaat atattctcgc
     2581 ttgtgatagc ggacctatga ccattcctgg agggattttt gaagggaaag aagtgcttca
     2641 aaaattatca gagggtgaag acatagagga tttggctaag ttttatggaa cgccggttaa
     2701 agaaatgcaa gacactttag atgaatatcg taaattcgta gctgccaaag caaaagcgtg
     2761 gcaagaatgg aaaaataatt ctgaacaaac agctgatagt gaagaacaag aatctgaaaa
     2821 tgatggtcaa gcaactttag agtttgaaac cgaagaataa aatgctgggc gggaaaccgc
     2881 ccttgtaaag aggtgaggaa atgccatcag aagaattaaa tttattcgat ttaatggatt
     2941 actatcctga gcaggctgct aaaaaaaagc gaaaggaaga agccttaaaa ccgattaaaa
     3001 ctcatagaaa cgatagaata gattatcctg cggcaagagc cgaaatagag cggattttag
     3061 gtaagaaagt aactacggtt tgcggatatt atgatcaccc tattaataaa gaacttcgtt
     3121 ggattttcaa ttttgaaata ggattttgct acatcaatga taaatgtcaa ctatacgaaa
     3181 tgcaaccggg tttagaaggg tttcgatatc gcgggaaagt acatgaggag gttttctata
     3241 atgcagacga tagaaaaaga gctactacaa cgattgagtg atagaagaat aggagttcaa
     3301 catcagattg cttcacttgt gcatacagag aagtgcacgt tgctagaagc tttaaaaatg
     3361 acagataaag aaatcgattc aacatttaat gaaatgcgaa tggagctaga tagttaggag
     3421 gatgaataat gacaactgtt gaaaagttaa gcataagaga gcaagcgctc aataaaatgt
     3481 taacggaaat gaatgaagca cattccggag ccgaggatgt gatacataac tggctctgta
     3541 atcaagtaga agaagcgatt tttgaaggca ttatgaaaga tgatagaagt attagtgggg
     3601 cggttaaata ctgctcctca agggcttcaa agcatcaggc ggaaggtgtg gccatgattg
     3661 atgacaaaac tgtcttttcc tgggtgagaa agtattttat atcagaaaaa gtgtcgaaaa
     3721 gtattgtaaa ggctacagtt aaagcaactg caacaaaacc agaaaaaacg aaagttaaag
     3781 ctaagaaaaa accgaaaaaa acaactgcgc aagaagggta tgagcaatta gatttgcttg
     3841 atttcttatg aagagagaag cgcaaaacta tattgataat aaattaaaac caccaaaagc
     3901 gttctttgaa tggtgtttct cacaaattcc aacttacaag tggtccaaca aaaaagaaac
     3961 tattctagct tccaatcgaa aaaactgcag tgttattgaa cagaagttaa gaaaaaactc
     4021 tagattgaca ttttttggta aattgaacgt gttcggtatt gtcttagtta catcgaaaag
     4081 aattgagata caaagttacg cgttctggaa tcgagtagtg gaaggaaaag aaataattga
     4141 atttgatcta gtcaattttg aacaatttgc tgaaggggaa cacgtaaagg ttgcaagtag
     4201 cgacggcaag atgtggtttg gtttaattcc agtatacggt gggatgtctg gcggacctta
     4261 ctcaatgatt cagttgtttg aaaatgactg gaaagaaaaa attcgaagta aatcagagct
     4321 taagtaccta gaaatcccgc acttagactt taaagaaatt gaaactatat ataaatatag
     4381 agttgaaatt gaatttttgc agaa
//
LOCUS       DASDYO010000176         4355 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.177, whole genome shotgun sequence.
ACCESSION   DASDYO010000176 DASDYO010000000
VERSION     DASDYO010000176.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4355)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4355)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4355
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.177"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(15..218)
                     /locus_tag="U0290_002825"
     CDS             complement(15..218)
                     /locus_tag="U0290_002825"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302853.1"
                     /translation="MKVRNKVKQLREERGIGQNELALALEVSRQTIHAIEKGKYNPSL
                     ELSLKMARYFRLTIEEIFQLEEN"
     gene            complement(345..1745)
                     /gene="pdgA"
                     /locus_tag="U0290_002826"
     CDS             complement(345..1745)
                     /gene="pdgA"
                     /locus_tag="U0290_002826"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peptidoglycan N-acetylglucosamine deacetylase
                     PdgA"
                     /protein_id="HEM2302854.1"
                     /translation="MKIRWIRLSLVTVLIIAVVFVGVIGFQKYQFSKSRNKVIMQMDR
                     LMKDQDGGNFRRLDKKENGVEIISYIPKTTEKKDNEIIQKEIEKATDAEVKKLNRDKE
                     TQGIIFYTYQKHRMAEQAISYKAVQSEYVKEGRTKFVLKDKKDICKNIVTDAETGALL
                     TLGEVLIKSNQTKLNLKTAVEEELIKTGGFSLKDVGNLGEIKSLVKWNQTDFEITNSE
                     LILPVKIPGAPEPNKVKVKLADIASSVNKRYLPSSVKVPEVPKAKTNKRIALTFDDGP
                     SASVTPGVLDTLKRHNVKATFFVLGSSVIQNPGLVKRELEEGHQVGSHSWDHPQLTKQ
                     STQEVYNQILKTQKAVFDQTGYFPTTMRPPYGAVNKQVAEEIGLPIIQWSVDTEDWKN
                     KNAGIVTKKVLAGATDGAIVLMHDIHKTTAASLDATLTKLKNQGYEFVTIDELYGEKL
                     QIGKQYFDKTDSRMVK"
     gene            complement(2038..2847)
                     /locus_tag="U0290_002827"
     CDS             complement(2038..2847)
                     /locus_tag="U0290_002827"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463943.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ZIP family metal transporter"
                     /protein_id="HEM2302855.1"
                     /translation="MLNYLSSLNPVLLALLAGIFTWACTAAGASLVFFFKNLNKKWGN
                     VMLGFAAGVMLAASFWSLLAPAIEMSKDLGKFSFVPALVGFLLGGIFLRVIDRIIPHL
                     HFGFPEQAKEGPKTSLRKSILLVLSITIHNIPEGAAVGVAFGAVITGDTETLITAIVL
                     ALGIGIQNFPEGAAVSIPLRGEGLSRGKSFWYGQLSAVVEPIFAVIGAVLVVFVTPIL
                     PFALAFAAGAMIFVIVEELIPESQVEGSTDLATAATMAGFAVMMVLDVALG"
     gene            complement(2874..3065)
                     /locus_tag="U0290_002828"
     CDS             complement(2874..3065)
                     /locus_tag="U0290_002828"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463942.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302856.1"
                     /translation="MAKPIEEIGEEIGAKVEKVARKTGNVAGTAAKLSVYSSIWAVKT
                     GVNKTRAFAQGFKQGWSGK"
     gene            3408..4280
                     /locus_tag="U0290_002829"
     CDS             3408..4280
                     /locus_tag="U0290_002829"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463941.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell envelope integrity protein TolA"
                     /protein_id="HEM2302857.1"
                     /translation="MTGLGTLLFLVGIGVLIFGLVSFRRKNWPRKKTQIIIISSILAI
                     IIGVGIIPTTDEEASTEEPTKQEEKTEKVDNTPILKAETTFTTDDEGTLVVEGKTNPG
                     AEVTLDFVAIPDAVTTADENGAFSLSVNQLDKAQDAVLSIVIDGQTKEQTLKLALTPA
                     YETKLTAKAEAERVAAEKAEAERVERERVAAEEKRAADAKIAAEKKAEEARVAAEKKA
                     AEEKRVAAERSKAAAAQPDTSNEQGQMVYITATGKRYHYDQNCRGLNNSNGETAVTVA
                     QAKAQGLTLCKFEQ"
BASE COUNT         1336 a          897 c          727 g         1395 t
ORIGIN      
        1 tgtatcgttt catgctaatt ctcctccagt tgaaaaatct cttctattgt taaacgaaaa
       61 tagcgtgcca tcttcaaact tagctctaaa ctaggattat atttaccttt ttcaatagca
      121 tggattgttt gtcttgaaac ttctaatgct aaagctaatt cattttgtcc gattcctctt
      181 tcttcccgca gctgtttcac tttattacgg actttcaatt aaccaccacc aaataagaag
      241 tatttacagt tattataaaa taaatacagc ttcacgtaaa gaaaacttta catttcgtat
      301 aaaaaaagta gctaaaatga ttcattcatc ttagctactg atttttattt caccattctt
      361 gaatctgttt tatcgaaata ttgcttccca atttgcaatt tctcgccata aagttcatca
      421 atagtaacaa actcatatcc ttgattcttt aatttagtca atgtagcgtc aaggctcgca
      481 gcagtggttt tatgaatatc atgcattagt acaatcgctc cgtccgttgc accagcaagg
      541 acttttttcg ttactatacc agcatttttg tttttccaat cttctgtatc aacagaccac
      601 tgaattattg gaagaccaat ctcttcagcc acctgtttgt ttactgcacc atatggaggg
      661 cgcattgtag ttggaaaata tccagtttga tcaaatactg ctttttgcgt ttttaaaatt
      721 tggttgtaca cttcttgtgt cgattgttta gttaattgcg ggtgatccca tgagtggctg
      781 ccaacttggt gcccttcctc taattcacgt tttactaaac ccggattttg tatgacacta
      841 gagccaagta caaagaatgt cgcttttaca ttgtggcgtt tcaatgtatc aagtacgcct
      901 ggtgttaccg aggcacttgg accatcatca aaagtaagcg caattcgctt gttggttttt
      961 gcttttggca cttctggaac tttcacactg cttggtaagt agcgtttatt cacagaacta
     1021 gcaatatcag caagttttac ttttacttta ttcggttccg gtgcacctgg tatttttact
     1081 ggcaaaatta gttcagagtt cgtaatttcg aaatctgttt gattccattt cactaaactc
     1141 ttaatttccc caagattccc aacatctttt aaagaaaaac cccctgtttt aatcagttct
     1201 tcttcaacag ctgtttttaa atttaattta gtttgattac tttttattaa tacttcccca
     1261 agtgttaaca aagcacctgt ttctgcgtcg gttactatgt ttttgcaaat atctttttta
     1321 tctttgagta caaatttagt tctaccttct tttacgtact ctgattgaac agctttataa
     1381 gatattgctt gctcggccat tctatgcttt tggtaagtgt aaaaaataat cccttgagtt
     1441 tctttatctc tatttaactt tttaacctct gcatctgtgg ccttttcaat ttctttttgg
     1501 ataatttcgt tgtctttttt ctcagttgtt ttaggaatgt aagaaatgat ttccactcca
     1561 ttttctttct tatccaagcg gcggaaattt cctccatctt ggtctttcat tagtctgtcc
     1621 atctgcatta ttactttgtt gcgcgacttt gaaaattggt atttttggaa acctattaca
     1681 ccaacaaaaa ccacggcaat aatgagaacg gtaactagtg aaagtctaat ccacctaatt
     1741 ttcacattat gcacctcacc ttagaaaaac cttccccagc ttttcttata aaacaattat
     1801 acatgaaaaa aagcaacttt ctagcttttg tactaaaata ggaaaaaagg accaacaatt
     1861 ctataacaat tgtcaaaaaa aagacacgga taaagtggga gcttttaccg tgtccgattt
     1921 atagttacag gattacccct gaaaactaac atattgtgaa gtatttcact attaatttta
     1981 ccgtaaaaaa acgcattccg caaatattaa atgtcgtttt ttgtccagtt tattatttta
     2041 tcctaacgca acatctaaaa ccatcattac tgcaaatccc gccatcgttg cagcagttgc
     2101 taaatcggtc gaaccttcta cttgagattc aggaattaat tcctctacaa taacaaaaat
     2161 cattgcacct gctgcaaagg ccagcgcaaa cggcaaaata ggtgtaacaa aaacaaccaa
     2221 tacagcacca attacagcga aaattggttc aactaccgct gaaagttggc cataccagaa
     2281 acttttccct ctcgagagcc cttctccgcg caaaggaatg gatactgccg ctccctctgg
     2341 aaagttttga ataccaatac caagcgccaa aactattgca gtaataagcg tctccgtgtc
     2401 tccagttatc actgctccga aagctacccc aacagctgcc ccttctggaa tattatgaat
     2461 agtaatggaa agaaccagta agatactttt tcgaagagaa gtttttggtc cttccttcgc
     2521 ttgctctgga aacccgaaat gtaaatgtgg aataatacgg tcaataacac gtaaaaatat
     2581 tcccccaagc aaaaagccaa ctagagctgg tacgaaggaa aacttcccta aatctttact
     2641 catttcgatt gcaggggcaa gaagcgacca gaagcttgct gcgagcataa cgcctgcagc
     2701 aaatcctagc ataacattgc cccatttttt atttagattt ttaaagaaaa atacgagtga
     2761 agctcctgct gcggtacaag cccatgtaaa aataccggca agaagtgcta acagtaccgg
     2821 atttagtgac gataagtaat ttaacaattc atgctctccc ttttcctatg cttttattta
     2881 ccagaccagc cttgtttaaa gccttgagca aatgcacgag tcttatttac gcctgttttc
     2941 acagcccaaa tggaactata aacagatagt ttagctgccg ttccagcaac atttccagtt
     3001 ttccgtgcaa ctttctctac ctttgctccg atttcttcac caatttcttc tatcggtttc
     3061 gccatttcta gcacctccaa agcacttgtc tttccttcat cataaagcaa tcaatcggat
     3121 tattcaagct gcttcctctt tatccttttc actaatacgc ttcctttcgc tatgatgaat
     3181 ttctagctaa ttcatctaac ctcgacattc tgattaatct ccatttactt agacaactac
     3241 tgtcttttta gcaaaatatg taattttttt atcatttttt tgattttctg aacattttca
     3301 ttgaatttct ttgtaaaaag tacaaaaaac gactgattta acttgtgcat taactcacat
     3361 tatgcatata ataattttgt tagacaaaaa gggagaggaa gatgtatatg acgggattag
     3421 gaactttatt gtttctagta ggtattggtg tattgatttt tggactggtg agctttagaa
     3481 ggaaaaattg gcctcgtaaa aaaacacaaa tcattattat tagttctatt ttagctatta
     3541 ttattggtgt tggaattatt ccgaccacag acgaggaagc ctcaactgaa gaaccaacca
     3601 aacaagaaga aaaaacggag aaagttgata ataccccaat tttaaaagca gaaacgactt
     3661 ttacaacaga tgatgaaggt accttggtcg tcgaagggaa aacaaatcca ggggcagaag
     3721 taacgcttga tttcgttgca attcctgacg ccgtgactac agctgatgag aacggcgctt
     3781 tcagtctttc tgtaaatcaa ctggataaag cacaagatgc cgttctttct attgtcattg
     3841 atggccaaac gaaagaacaa acgcttaaac tagcactaac ccctgcttac gaaacaaaac
     3901 ttactgctaa agcggaagca gagcgagtag ccgcggaaaa agcggaagca gaacgagtag
     3961 aacgcgaacg tgtagcagcg gaagaaaaac gcgcagctga tgcaaaaatt gcggctgaaa
     4021 agaaagccga agaagctaga gtggcagccg agaaaaaagc tgcggaagaa aaacgggttg
     4081 cagcagaacg ttcaaaagct gcagctgcac aaccggacac gagtaacgaa caaggacaaa
     4141 tggtttatat cactgctact ggcaaaagat atcattatga tcaaaattgt cgcggcttaa
     4201 ataactctaa tggcgaaact gctgtgacag ttgctcaagc aaaggcacaa ggcttaactt
     4261 tatgtaaatt tgaacaataa aaaaaaagca aaatttctta tcatgagaaa ttttgctttt
     4321 ctatttgttt ttaattgaat ttaggctaga ttcat
//
LOCUS       DASDYO010000177         4250 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.178, whole genome shotgun sequence.
ACCESSION   DASDYO010000177 DASDYO010000000
VERSION     DASDYO010000177.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4250)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4250)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4250
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.178"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            22..735
                     /locus_tag="U0290_002830"
     CDS             22..735
                     /locus_tag="U0290_002830"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302858.1"
                     /translation="MSGMAKYMEIYIDIRDKINQNKYEINEKLPDGDSMARTYDCSKL
                     TVKKALDMLVQEGMIIRRRGAGTFVKSHSTNGGEFALGPMSGLVNTFGKDNIKSKVIL
                     FSIEKPSKEVAEKLEMQDDYIYRIIRMREVGHKAYSIEHTYMPLAIIPGLEPRHLEDS
                     IYNYIRDDLKLKMQSAHVWVRGDKSNQEDSKLLDLEEPTFMMEIEKLAHLEDGRVFEY
                     SITRHTYESFVFETVFVQN"
     gene            complement(774..1109)
                     /locus_tag="U0290_002831"
     CDS             complement(774..1109)
                     /locus_tag="U0290_002831"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463900.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="alkylphosphonate utilization protein"
                     /protein_id="HEM2302859.1"
                     /translation="MPKLPNCPECNSEYAYEDRGLLICPECGHEWSAVAEEATEEKVF
                     KDANGNVLTDGDSVTVIKDLKVKGASNPIKMGTKVKNIRLVDGDHDIDCKIDGFGPMK
                     LKSEFVKKI"
     gene            complement(1146..1865)
                     /locus_tag="U0290_002832"
     CDS             complement(1146..1865)
                     /locus_tag="U0290_002832"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463899.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YebC/PmpR family DNA-binding transcriptional
                     regulator"
                     /protein_id="HEM2302860.1"
                     /translation="MGRKWANIKEKKASKDKTNSRIYAKFGIEIYVAAKSGDPDPHAN
                     QKLRFVIERAKTYNVPKHIIDRAIEKAKGTGDETYSELRYEGFGPNGSMIIVDALTNN
                     VNRTASDVRAAYSKNGGNMGVSGSVAYMFDNTAIFGVEGKDADELLELLMEADIDVRD
                     ILDEDGQAIIYAEPEDFHKVQEGLKAAGIEEFTVAEIEMIPQNDIQLSGEDLEKFEKL
                     IDALEDLEDVQKVYHNVELED"
     gene            complement(1961..2470)
                     /locus_tag="U0290_002833"
     CDS             complement(1961..2470)
                     /locus_tag="U0290_002833"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463898.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="NUDIX domain-containing protein"
                     /protein_id="HEM2302861.1"
                     /translation="MEEWDLLNENRELTGKTHIRGEKLAPGELHLVVHVCIFNEKGQL
                     LIQKRQKDKEGWPNYWDLSAAGSALKGETSRQAAEREVQEELGITIDLSNTRAKFSYH
                     FEAGFDDYWFITKDVELSDLTLQKEEVADARFVTKEELEVLRSSGEFIPYFFLNQLFN
                     LKNATSIHF"
     gene            complement(2520..3467)
                     /locus_tag="U0290_002834"
     CDS             complement(2520..3467)
                     /locus_tag="U0290_002834"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003741444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YafY family transcriptional regulator"
                     /protein_id="HEM2302862.1"
                     /translation="MRKAERLNDMMLFLNDKNSFQLSDIMAKYGVSRSTAIRDIQSLE
                     EIGMPIYSERGRNGHYRVLRNRLLSPIVFNIDEVFALYFSMLTLKAYETTPFHLSVEK
                     LKTKFERCLSAEKIEMLRKTEEVFSLGYIKHNNQCEFLDIILQFTMEEKVCQINYDKN
                     GTEKTYIVQFYNISSAYGQWYVTSYNFETKRMQVFRCDKILALKENDTFEAKKMEELK
                     RVADSFNKKADVTTFEVEIASNGVDLFFKENYPSMKLRQQQGKNVIHGFYHKGEEQFI
                     INYLLGYGEKIIAIQPDSLRDMLLNELDTIKKHMQNLSS"
     gene            3562..4179
                     /locus_tag="U0290_002835"
     CDS             3562..4179
                     /locus_tag="U0290_002835"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734595.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Type 1 glutamine amidotransferase-like
                     domain-containing protein"
                     /protein_id="HEM2302863.1"
                     /translation="MKNLFLTSSFKDVVPLFTEFESNLQGKTVTFIPTASTVEEVVFY
                     VEAGKKALEDLGLIVEELDVAAENLEEITMTLKKNDFIYVTGGNTFFLLQELKRTGAD
                     KLILKEIAKGKLYIGESAGAVITSPNISYIQSMDSVKKATNLTNYDALNLVDFYTLPH
                     YNNTPFKKITQQIIADYADDLKIFPISNCETIFVQGNVVTSKGIL"
BASE COUNT         1279 a          820 c          726 g         1425 t
ORIGIN      
        1 atcagtaaag gagccaataa aatgtcggga atggctaaat acatggaaat atacatagat
       61 atccgtgata aaatcaacca aaacaaatac gaaattaacg agaaattgcc tgatggggac
      121 agtatggctc gcacgtatga ttgcagcaag ctcactgtca aaaaagcact ggatatgctt
      181 gtacaagaag gcatgattat tagacgacgc ggggctggga ctttcgtgaa atcccattcg
      241 actaacggcg gagaattcgc gcttgggcca atgtccggac ttgtaaatac atttggaaaa
      301 gacaatatta aatccaaagt cattttattt tctattgaaa aaccatcgaa agaagtcgca
      361 gagaaattag agatgcagga tgactatatt taccgaatca tccggatgag agaagttggt
      421 cataaagcct attcgattga acatacttat atgccacttg cgattattcc gggtctagaa
      481 ccacgtcatt tagaggactc gatttataat tatattcggg atgatttgaa acttaagatg
      541 cagagtgcgc atgtttgggt acgcggggat aaatcaaatc aagaggatag caagctcctc
      601 gatttagaag aacctacttt tatgatggaa attgaaaaat tagcgcattt ggaagatggt
      661 cgtgtgttcg aatattcgat aacgcgccat acgtatgaat cgtttgtgtt tgaaacggtt
      721 tttgtgcaga attaaaaaaa acagcgactc tctactaaga gaatcgctgt tttttatatc
      781 ttcttaacaa attctgattt taatttcatt gggccgaagc cgtcaatttt gcaatcaatg
      841 tcgtggtcgc cgtctactag gcggatattt tttacttttg ttcccatttt gattgggttt
      901 gatgcgcctt ttactttaag atctttgatg actgtgacag aatccccatc tgttagtacg
      961 ttgccgtttg catctttgaa cactttttct tcggtagctt cttctgctac agcgctccac
     1021 tcatggccgc attccgggca gattaataag ccgcgatctt cgtaggcata ctctgagtta
     1081 cattctgggc aatttggtaa ttttggcatt ttatcaattc ctccgattgt tgtaatagtt
     1141 ggctgttaat cttctaattc gacgttatga tatacttttt gcacgtcttc taggtcttct
     1201 aaagcatcaa ttagtttctc gaatttttct aagtcctcac ctgataattg aatatcattt
     1261 tgaggaatca tttcgatttc cgctactgta aattcttcaa ttccagccgc tttcaaacct
     1321 tcttgtactt tgtggaaatc ttctggttct gcataaataa tcgcttggcc atcttcgtct
     1381 aaaatatcac gaacatcaat atccgcttcc attaaaagtt ctaataactc atccgcgtct
     1441 tttccttcaa caccaaaaat ggctgtatta tcaaacatat aagctactga accacttacg
     1501 cccatgttgc cgccgttttt gctataagct gcgcgaacat cggatgccgt acgattcaca
     1561 ttatttgtca gtgcgtctac gataatcatc gaaccatttg gaccaaagcc ttcatagcgc
     1621 agttctgaat atgtttcatc gccagtgcct ttcgcttttt cgattgcacg gtcaataata
     1681 tgtttcggca cattgtatgt ttttgcacgt tcaataacaa aacgtaattt ttggttggca
     1741 tgcggatctg ggtcgcccga tttagccgct acatatattt caattccaaa ttttgcatag
     1801 atacgactat ttgttttatc ttttgacgct tttttctctt taatatttgc ccatttacgg
     1861 cccatattac cactcgcttt ctaattggag ttttctcgtg tctctgtact attataagtg
     1921 taggaaacga atttgttaag tggaaattta gctatattcg ttaaaaatgg atagatgtgg
     1981 cgtttttgag gttaaaaagc tggtttaaaa agaagtatgg aataaattcg cccgaacttc
     2041 ttaacacttc taactcttct ttagtcacaa aacgggcatc tgctacttct tctttttgta
     2101 aagttaagtc gctaagttcc acgtctttcg taataaacca ataatcatca aatcccgctt
     2161 cgaaatggta actgaatttg gcacgggtgt tacttaaatc aattgtaatc cctagttctt
     2221 cttgcacttc tcgttcagca gcttggcgac ttgtttcgcc ttttagcgca gaacccgccg
     2281 cagaaagatc ccaataattc ggccaacctt ctttatcttt ttggcgcttt tggattaaaa
     2341 gttgcccttt ttcgttaaaa atacatacgt gaacaaccaa atgaagttct ccgggcgcta
     2401 gtttttcacc gcggatatgt gttttcccag ttaattcacg attctcattt agcaaatccc
     2461 attcttccac taaaatcggc tccttctaat cattgacttg ttttcattat acaacaaagt
     2521 taggatgata aattttgcat atgttttttt atcgtatcga gctcatttag caacatatct
     2581 cgcaatgaat ctggctggat agctataatt ttttcaccat aacctagtaa ataattgata
     2641 ataaattgtt cctctccttt atgataaaaa ccatgaataa catttttacc ttgctgttgg
     2701 cgaagtttca tcgatggata attttcttta aaaaataagt caacaccatt tgaggcaatt
     2761 tccacttcaa aggtagttac atcagctttt ttattaaaag aatcagccac tctttttaat
     2821 tcctccattt tcttagcttc aaaagtatca ttttctttta gcgcaaggat tttatcacaa
     2881 cgaaatacct gcatccgttt cgtctcgaag ttataactcg tcacatacca ttgcccgtat
     2941 gccgaagata tattataaaa ttgaacaata tacgtttttt cagtcccatt tttatcataa
     3001 ttaatctgac acactttctc ttccatcgta aattgcaaaa taatatccag aaattcacat
     3061 tgattattat gctttatata gccgagacta aatacttctt ctgtttttcg aagcatttcg
     3121 attttttcag ctgaaagaca acgttcaaat ttcgttttta atttttccac acttaaatga
     3181 aaaggtgttg tttcataggc ttttaaggta agcatcgaaa aatagagcgc aaatacctca
     3241 tcgatattaa aaacaatggg cgagagtagc cgattacgaa gcacccgata atgaccattt
     3301 cgtccccgtt ccgaatatat cggcatgcct atttcttcca aagactgtat atctcgaata
     3361 gcagtactgc gggaaacgcc atattttgcc attatgtcgc ttaattgaaa cgaattttta
     3421 tcatttaaaa acaacatcat atcatttaat cgctctgctt ttctcatcgc catctctttt
     3481 cttttttcag attaaaaggt gtcactaatt gataccttta accattatac tataattaga
     3541 aaccaaagga gctaaaaaat gatgaaaaac ttatttttaa cctcgtcttt taaagatgtt
     3601 gtaccattat ttactgaatt tgaaagcaat ctccaaggaa aaaccgttac ttttatcccg
     3661 acggctagca ccgttgaaga agttgttttt tatgtagaag ctggtaaaaa agcgctcgag
     3721 gatttagggt taattgtaga ggaactagat gtggcggcag aaaatctaga agaaataacg
     3781 atgacactca aaaaaaatga ttttatttat gttactggag gaaatacttt ctttttacta
     3841 caagaattaa aacgaactgg tgcagataaa ttaattttaa aggaaattgc taaaggaaaa
     3901 ttatatattg gtgaatcagc cggtgcagtc atcacgagtc ctaatatatc gtatatccaa
     3961 tcaatggaca gcgtaaaaaa agccactaat ttaaccaact atgatgcttt aaatttagtc
     4021 gatttctata cgcttcctca ttacaacaac acacctttta aaaaaataac acaacaaata
     4081 atagcggact atgcggatga tttaaaaata tttccgatta gtaactgcga aactattttt
     4141 gtacaaggta acgtggtaac ttcgaaagga attctttaac agcattctcc aaaaacgcct
     4201 tgaaacttgg atatccgttt aagtttcaag gcgtttttgt tgtataataa
//
LOCUS       DASDYO010000178         4195 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.179, whole genome shotgun sequence.
ACCESSION   DASDYO010000178 DASDYO010000000
VERSION     DASDYO010000178.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4195)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4195)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4195
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.179"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(24..506)
                     /locus_tag="U0290_002836"
     CDS             complement(24..506)
                     /locus_tag="U0290_002836"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465766.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylated-DNA--[protein]-cysteine
                     S-methyltransferase"
                     /protein_id="HEM2302864.1"
                     /translation="MTDLYYDTLHFSDTELYFAATKTGLFYVGTKAEKIQSAKRSPEK
                     MNMYKEELVAYLNGELTYFTVPMDLSATPLQLEVFHALEAIPYGETRTYTEIAAQINR
                     PKAVRAVGTAIGRNPLLFIIPCHRVIGKNGKLTGYSGGIGMKESLLKLEKAKINQFSF
                     "
     gene            652..1212
                     /locus_tag="U0290_002837"
     CDS             652..1212
                     /locus_tag="U0290_002837"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003744500.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methylphosphotriester-DNA--protein-cysteine
                     methyltransferase family protein"
                     /protein_id="HEM2302865.1"
                     /translation="MSDYYLTKKRWQAISTNDKTADGTFFYGVTSTKIFCYPSCKSRL
                     PKKENIVIFHSAEEAFSHGYRACKRCKSGGTALPDTEWITNIEMYIKENFAKPLTLQI
                     IADDCHGSPYHLHRTFKRITMITPITYLENVRISYAKMQLTSTNQSIETIGKMAGFPN
                     PSHFSTTFKRHTGLSPNQFRKTIIKN"
     gene            1234..2103
                     /locus_tag="U0290_002838"
     CDS             1234..2103
                     /locus_tag="U0290_002838"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465768.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="RluA family pseudouridine synthase"
                     /protein_id="HEM2302866.1"
                     /translation="MTHVTLPILEDWEGLSLTTILQEKFHLGKKARHEIRMSQNVLLN
                     NKPLDDWNTPLFVGASLSLPVFLHDKIPVYEYDLEIIYEDDFLLVVNKPVDMKTHPND
                     SYETDTCANAVQYYLEKTGQDANALAVHRLDQTTSGLVLFAKNKLAIAGLSWQMENRA
                     IHRTYLAAVDGTWGLVMQTINKPIGEDRHHGSRRQISPYGQPAVTHVKVLENDNEKNT
                     SLVECQIETGRTHQIRVHLSGIGHPIIGDTLYGGSPRANRIMLHAEKLHLNHPFKGKE
                     MNFSAPAGDDWVF"
     gene            complement(2116..2508)
                     /locus_tag="U0290_002839"
     CDS             complement(2116..2508)
                     /locus_tag="U0290_002839"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465769.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2302867.1"
                     /translation="MLHHVEIYVADLEESRLFWSGLLEELSYELYQTWNEGFSYKFAD
                     TYLVFVQTEEPFVAEGYHRKRVGLNHLAFHGGTKERVDDFRAKLKAKGTKLLYEERYP
                     FAGGENHYAVFFEDPNGIKVEICTEVTT"
     gene            complement(2510..3166)
                     /locus_tag="U0290_002840"
     CDS             complement(2510..3166)
                     /locus_tag="U0290_002840"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465770.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA alkylation repair protein"
                     /protein_id="HEM2302868.1"
                     /translation="MTDIQMVFRANRSLIDAPPMEAYMKNQFTFLGIRAGERKKLVAE
                     YLKENGAPQDLLGFTIALFAEEEREFQYVAIDLLSRYGKKQPSEAIKVYEQLIVTKSW
                     WDTVDGLAGTVVSNHFKLYPELIPTYNEAWINGDNIWLARTAILFQLKYKEETDVDLL
                     FSNCEKWLDSKEFFIQKAIGWALRQYAKVDSGAVRQFVNSHSLAPLSRREALKHIGEA
                     "
     gene            complement(3163..4047)
                     /locus_tag="U0290_002841"
     CDS             complement(3163..4047)
                     /locus_tag="U0290_002841"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465771.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aldo/keto reductase"
                     /protein_id="HEM2302869.1"
                     /translation="MTKTLQDRMILPGNETIPYIGLGVFQVTEQEFIAGAVEKAIEVG
                     YRLFDTAAVYNNEAIVGQAIASSAVSREELFISSKVWNGDLGFDETLFAFERTLRNLK
                     LDYLDLYLIHWPVAGKYRDSWRAMERLHDEKLIKSIGVANFKQHHLSDLLVAANEKPV
                     LNQVETHPLLPQNDLRKYLAEQNIAHAAWSPLAKGILMQNPVITEIAKKHQASVDQVI
                     LQWHLNRNTIIFPKSITSSRIEENSRLSYFQLDAIDMEKIDRLETGKRVGPDPDDLEY
                     FLSSIERERAYLSGENAE"
BASE COUNT         1291 a          912 c          680 g         1312 t
ORIGIN      
        1 aaaaaaataa atcaattctc tttttaaaaa gaaaattgat ttatttttgc tttttcaagt
       61 tttaagagtg attctttcat ccctatcccc ccgctataac ctgttaattt gccattttta
      121 ccaattactc tgtggcatgg aataatgaaa agtagtgggt ttcttccgat tgccgttcca
      181 actgcgcgca cggctttggg gcgatttatc tgtgctgcaa tttctgtata cgttctagtt
      241 tctccataag gaatagcttc caatgcgtga aatacttcaa gttggagagg agtagcggac
      301 aaatccattg gtacagtaaa atacgtaagt tctccgttca aataagcgac caattcttct
      361 ttatacatgt tcattttttc tgggcttcgc ttggctgatt gaatcttttc tgcctttgtt
      421 ccaacgtaaa atagcccagt tttcgtcgct gcgaaataaa gctctgtgtc tgaaaaatga
      481 agcgtatcat aatataaatc tgtcatttcc ttcacctctt tctaatgtta attatacgct
      541 aaattgaata acatttctaa ccagtttcac tataagagca agattagaaa agttttcctc
      601 gcaatttacc ttcataacgt ttatgattaa taagaagttg aggtgataac attgtcggat
      661 tattacttaa ccaaaaaaag atggcaagca atttcaacga atgataagac tgctgatggc
      721 acatttttct atggtgttac atctacgaag attttttgct atccttcttg taaatcacga
      781 ttaccaaaaa aagaaaacat cgttattttc catagtgcgg aggaagcttt ttcgcatggc
      841 taccgggctt gtaaacgatg taaatctggt ggtactgcgc tacctgatac ggagtggata
      901 acaaatatcg aaatgtatat taaagaaaat tttgccaaac cgctcacttt acaaatcatt
      961 gcggatgatt gccacggaag tccgtaccac ttacaccgaa catttaagcg aatcacgatg
     1021 attacaccca ttacttacct tgagaacgtc cggattagtt acgcaaaaat gcagctaacc
     1081 tcgaccaacc aatccattga aactattgga aaaatggctg gctttccaaa cccctctcat
     1141 ttttctacta catttaaaag acataccggt ttgtcaccaa accaatttcg aaaaacaata
     1201 ataaaaaatt aaattagaac ggatgatttg actatgacac atgtaacatt acctatttta
     1261 gaagactggg aaggcctttc actaactact attttgcaag aaaaatttca tctcggtaaa
     1321 aaagcgcgac atgaaattcg catgtctcaa aatgttttgc taaacaataa gccactggat
     1381 gattggaata cgccactttt cgttggagcg agtctttctt taccagtttt cttacatgac
     1441 aaaatccctg tctatgagta cgacttagaa attatttatg aagatgattt tttactagta
     1501 gtgaataaac cagttgatat gaaaactcac ccaaatgata gttatgaaac agatacttgc
     1561 gcgaatgccg tgcaatatta cttagaaaaa acaggccaag atgcgaacgc cctagcagtt
     1621 caccgtcttg atcaaactac ttccggttta gtactgtttg ctaaaaacaa attagctatc
     1681 gccggcttat cttggcaaat ggaaaataga gcgattcacc ggacttatct cgctgcagtt
     1741 gatggtactt ggggactcgt gatgcaaaca atcaacaaac caattggcga agatcgtcac
     1801 cacggttcca gacgccaaat cagcccatac ggtcaaccag cagtaacgca tgttaaagta
     1861 ttagaaaatg ataacgaaaa aaacacctct cttgtagaat gccaaatcga aactggtcgg
     1921 acgcaccaaa ttcgcgttca tttaagcgga attggccatc caattattgg cgatacgctt
     1981 tatggtggtt cccctcgtgc taatcgcatc atgctacatg ccgaaaaatt acatttaaat
     2041 catcctttca aaggtaaaga aatgaatttt tctgctccag ctggagatga ttgggtattt
     2101 taaaaagcca caacattacg ttgtgacttc tgtacaaatt tctactttta ttccatttgg
     2161 atcttcaaaa aatacagcat aatgattttc accgccagca aaaggatatc tttcttcata
     2221 tagaagtttg gttccttttg cttttaattt ggctcgaaaa tcatccaccc gttcttttgt
     2281 gccaccatga aatgccaaat gattgagccc aactcgtttg cgatgataac cttccgcgac
     2341 aaacggttcc tctgtttgca caaatactaa atacgtatcg gcgaatttat aactaaagcc
     2401 ttcattccaa gtctggtata actcataaga aagttcttct aacagccctg accaaaacaa
     2461 gcgactttct tctaaatcag ctacatatat ttccacatga tgtaacatat cacgcctccc
     2521 cgatgtgttt aagtgcttct cttcggctta acggcgcaag cgagtgacta tttacaaact
     2581 gacgaactgc cccgctatcg acttttgcat attgtctgag cgcccatcca atcgcttttt
     2641 gaataaagaa ttctttggaa tccagccatt tttcgcaatt ggaaaaaagt aaatctacat
     2701 cggtttcttc tttgtacttc aattgaaata aaattgccgt tcgagcgagc caaatgttat
     2761 ctccatttat ccacgcttca ttataggtag gaatcaactc aggatatagt ttaaaatgat
     2821 tacttactac cgttcccgct aggccatcca cagtatccca ccaagatttc gttacaatta
     2881 attgctcata tacttttatc gcctcactag gctgtttttt accgtaacgg cttaataaat
     2941 caatcgccac atactgaaat tcacgctctt cttcagcaaa taaggctatc gtaaatccaa
     3001 gtaaatcttg cggcgcccca ttttctttca aatattccgc taccaatttt tttcgttcac
     3061 cggctctaat tcccaaaaaa gtaaattgat ttttcatgta agcttccatt ggcggagcat
     3121 ctattaaaga acgattcgcg cggaatacca tttgaatatc tgtcattccg cattctcacc
     3181 tgataaataa gcgcgttccc gttcaatact acttaaaaag tattctaaat catctggatc
     3241 tggtccaaca cgtttccccg tttctaagcg atcaattttt tccatatcaa tggcatctag
     3301 ttggaaatag gacaaacgtg aattctcctc aatccgacta gaagtaattg acttcggaaa
     3361 aataatcgta ttgcggttca aatgccattg taaaatcact tgatctacag atgcttgatg
     3421 ttttttcgca atttctgtaa tcaccggatt ttgcattaat attcctttag ccagcggtga
     3481 ccaggcagcg tgcgcgatat tctgttccgc caaatactta cgaaggtcat tttgcggtaa
     3541 cagtggatgc gtttccactt gatttaaaac tggtttttca tttgcagcaa ccaataagtc
     3601 acttaaatga tgttgcttga aattcgcaac tccaatagat ttaatcaatt tttcgtcatg
     3661 aagccgctcc atcgctcgcc atgaatcacg gtatttccca gctacaggcc aatgaattaa
     3721 atacaaatcc aaataatcca acttcaaatt ccgaagtgtt cgctcaaaag caaataacgt
     3781 ttcatcaaag ccaaggtctc cgttccacac tttcgaacta ataaataatt cttctcgtga
     3841 gactgcgcta ctagcaattg cttgcccaac aatcgcttca ttattataaa ctgccgctgt
     3901 atcaaacaaa cgataaccta cttcaattgc cttttccaca gcaccagcga taaattcttg
     3961 ttctgttact tgaaatacac caagtccaat ataaggaatt gtctcattcc ccggtagtat
     4021 cattctgtct tgtaatgttt ttgtcaaaac gaaaccctcc tcacgaaaac tgttttgtga
     4081 actttttctc ttaaatgaat tatacactat tttcgcaaat ttatatttta aaaccagtat
     4141 accgaaatgc gccttactct cctaataaaa agccacaaaa attctacttt tttta
//
LOCUS       DASDYO010000179         4178 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.180, whole genome shotgun sequence.
ACCESSION   DASDYO010000179 DASDYO010000000
VERSION     DASDYO010000179.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4178)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4178)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4178
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.180"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1456
                     /locus_tag="U0290_002842"
     CDS             <1..1456
                     /locus_tag="U0290_002842"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="InlB B-repeat-containing protein"
                     /protein_id="HEM2302870.1"
                     /translation="IGGLTNLTTLFLSQNHITDIRPLASLSKMDSADFANQVIKKPAR
                     NFSKTLSVPNNITSIDGTLVTPKTISNNGTYDAPNVNWSSPSYLPEVRYTFKQDVAVG
                     STTSSYTGIIIQPLNEPVDYNVTFNIDGNTSEVKTVTEEDLIPEPTNPTKQGYTFDGW
                     YDAETGGTKWDFTTGQMPANDLMLYAHFSVNSYQVNFDIDGAVMNEAVVYDTLLNEPT
                     APTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTVSSYQVNFDIDGAVTNE
                     AIVYDALLNEPATPTKQGYTFDGWYDAETGGNKWDFKTMKMPANDVTLYAHFTINNYQ
                     ANFDIDGAVTNETITYDTLLNEPTAPTKQGFLFDGWYDAEVGGTKWDFNTMKMPANDI
                     NLYAHFSKETPLIPSPSDESDSKPTNGSITINEPSATSMPAQNNNITVTAGENTPELT
                     TAKLPKTGDNNPWQTLFAGILLSSSAFYIWRKKA"
     gene            complement(1504..4107)
                     /gene="ppsA"
                     /locus_tag="U0290_002843"
     CDS             complement(1504..4107)
                     /gene="ppsA"
                     /locus_tag="U0290_002843"
                     /EC_number="2.7.9.2"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003729036.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphoenolpyruvate synthase"
                     /protein_id="HEM2302871.1"
                     /translation="MKPYVLKFQEIRPHSEALVGGKGMNLGACSYIEGVHVPAGFCLT
                     TEAYKRTLAENNEFTQLLQRLSSLKTSDMDAIREISETIRTLIQHTQIPSEIASYMDA
                     TLLDVGGYEMPFAVRSSATAEDLPHASFAGQHDTYLNIIGKDALLQHISMCWASLFTE
                     RAIIYRIQNQFDHRKVQLAVVIQQMISPEASGILFTADPITSNRKSLSIDASFGLGEA
                     LVSGLVSADSYTVRENTITNKIIATKKLAIYSLKEGGTETRILEKSQQTKQTLTDQQI
                     IQLAKLGRKIEAYFGKPQDIEWCLAEGAFYIVQSRPITTLYPIPEVNEPGNRVYISVA
                     HQQMMTDAMKPLGLSFYLMTTPATMYTAGGRLFVDITQSLSAKVSRDMMVNSLGQSDP
                     LIKDALLTVINKKGFLPPLPTEENPSQAPVSGKPPVRSIPDSSSVFELVRNSENSIKH
                     LKQSIETKNGSDLFDFIVEDLEELKRVLFNPTSIDAIMAGMDASAWLNEHIYQWLGEK
                     NVADKLSESAPNNITSQMGLELLDVADVIRPYPAVRAYLEQTKNPDFMNELATLEGGA
                     ETKKALEDYLQKYGMRCAGEIDLTKTRWIENPLTLIPLILSNIKNFDSSASMHKFAQG
                     EKEAFHKEQEILRRLQELPDGEQKAMETKEKIDILRHFIGYREYPKYGMINRYFIYKL
                     ALLRAGEQLVKDGILQEHEDIYFLYFEELREVVRTGQVDYELINARKRDFATFEKLTP
                     PRILTSDGEMINGEYKRENLPKDAILGLPVSSGTVEGRARVILEMEKADLEDGDILVT
                     AYTDPSWTPAFVSIKGLVTEVGGLMTHGAVIAREYGLPAVVGVENATTIIKDGQQIRI
                     NGTEGYIEILD"
BASE COUNT         1263 a          834 c          856 g         1225 t
ORIGIN      
        1 gattggtgga ttaactaatt taactacttt atttttatcg caaaatcata ttacagacat
       61 aagaccatta gcaagtttaa gtaaaatgga ttccgctgac tttgcaaatc aggtgataaa
      121 aaaaccagca cgtaattttt cgaagacatt atctgttccg aataatataa ctagcataga
      181 tggaacacta gttactccta agacaattag caataatgga acctacgacg cgccaaacgt
      241 gaattggtct tcgccgagct atcttccaga agtaagatat acattcaagc aagatgtggc
      301 ggtgggatca accacaagta gttatactgg tatcataatt caaccgctaa atgagccagt
      361 agactacaat gtcacattta atatagacgg caatacaagc gaagtaaaaa ctgtaacaga
      421 agaagatcta attccagaac ctacgaaccc gaccaaacaa ggttatacat ttgatggttg
      481 gtacgacgcc gaaacaggtg gaacaaaatg ggactttaca actgggcaaa tgcctgcaaa
      541 tgatctcatg ctatatgccc atttttccgt aaatagttat caagtgaatt ttgatataga
      601 tggcgcagta atgaatgaag cggtagtata cgatactttg ctcaatgaac cgaccgctcc
      661 aaccaaacaa ggttatacat tcgatggttg gtatgacgca gaaacaggcg gtaataagtg
      721 ggatttcaaa acgatgaaaa tgcccgcaaa tgatgttact ttatatgcac attttactgt
      781 cagcagttac caagtgaatt ttgatataga tggtgcggta acgaatgaag caatagtata
      841 cgatgcctta ctcaatgaac cggcgactcc aactaaacaa ggttatacat ttgatggctg
      901 gtatgacgca gaaacaggcg gtaataagtg ggatttcaaa acaatgaaaa tgcccgcaaa
      961 tgatgtcact ttatatgcgc attttaccat caacaactat caagctaatt ttgatataga
     1021 tggtgcggta acgaatgaaa cgataacata tgatacctta cttaatgaac cgactgctcc
     1081 aaccaaacaa ggtttccttt tcgatgggtg gtatgacgca gaagtaggcg gaacaaaatg
     1141 ggattttaac acgatgaaaa tgcctgcgaa cgatattaat ttgtacgcac atttcagtaa
     1201 agaaacgcca cttattccta gcccatctga cgaatcagac tcgaaaccta ccaatggatc
     1261 aatcactata aatgaaccga gtgcaactag tatgccagcc caaaataata acatcacagt
     1321 aacagcaggg gaaaatactc cagaactaac aacagctaaa cttccgaaaa ctggagataa
     1381 taacccgtgg caaacactat tcgccgggat attactttca tcatccgcgt tttatatttg
     1441 gagaaaaaaa gcataattaa aaaacccagt atttcctaaa atggagatta ctgggttttt
     1501 ggtttaatca agaatctcaa tatagccttc tgtcccattg atgcgaattt gctggccatc
     1561 ttttataatg gtagttgcat tttcgacacc cacgacagcg ggaaggccgt attcgcgcgc
     1621 aatcactgct ccgtgcgtca taagcccgcc aacctcggtc acaagccctt taatagatac
     1681 aaatgcggga gtccaactag ggtcagtata agccgtaaca agaatatcgc catcttctaa
     1741 atccgctttt tccatttcta aaatgacgcg agcgcgacct tcaactgtcc ctgatgaaac
     1801 tggaagtcca agaatggcgt ctttagggag attttcgcgt ttgtattcgc cgttaatcat
     1861 ttctccatca gaagtaagga tgcgtggtgg cgttaatttt tcaaaagtgg cgaaatcacg
     1921 ttttcgagcg ttaataagtt cgtaatcaac ttgaccagta cgcacgactt cgcgcagttc
     1981 ctcaaagtaa agaaaataaa tatcttcatg ctcttgcaga atgccatctt ttacaagttg
     2041 ttcgccagct cgaagtaaag ccagtttgta aataaagtag cgattaatca tcccgtattt
     2101 aggatactca cgatagccga tgaaatgacg taaaatatcg attttttctt ttgtttccat
     2161 cgctttttgt tccccgtccg gaagctcttg caaacgtctt aggatttctt gttctttatg
     2221 gaaagcttct ttttctccct gagcaaattt gtgcatactc gcgctggagt cgaaattttt
     2281 gatgttactt aaaatcagcg gaataagcgt tagcgggttt tcaatccaac gagttttggt
     2341 taagtcaatt tcacccgcac agcgcatccc gtatttttga aggtaatctt ctagcgcttt
     2401 tttggtttct gcaccacctt ctaaagtagc tagttcattc atgaaatcag ggtttttcgt
     2461 ttgttctaaa taggctctga cagcagggta ggggcgaatg acgtcagcta catctaataa
     2521 ttcaagtccc atttgtgaag taatattgtt tggggctgat tctgacagtt tatcggcgac
     2581 atttttttct ccgagccact ggtagatatg ttcatttaac caagctgaag cgtccatacc
     2641 tgccataatg gcatcaatgc tagtaggatt aaataaaact cgctttaatt cttccaaatc
     2701 ctctacgata aaatcaaaca aatcagatcc gtttttcgtt tcaatggatt gcttcaagtg
     2761 ctttatagag ttttcgctgt ttcgaactaa ttcaaaaacg ctagatgaat caggaatgct
     2821 acgcacgggt ggttttccag acacgggtgc ctgacttgga ttttcctcgg ttggtagtgg
     2881 aggcaggaat ccttttttgt taattacagt gagcaaggca tctttaataa gtgggtctga
     2941 ttgaccgagt gaattgacca tcatatcgcg agaaactttg gctgacaggc tctgagtaat
     3001 atcgacaaac aaccgccctc ctgctgtata catcgtggcg ggagtcgtca ttaaataaaa
     3061 ggaaagtccc agtggtttca tcgcgtcagt catcatttgc tgatgtgcaa cagaaatata
     3121 aacacgattg ccgggttcgt ttacttctgg aattggatat aaagtcgtga taggtcgact
     3181 ctgaacaatg taaaaagcac cttccgctaa acaccattca atatcttgtg gtttcccaaa
     3241 ataggcttcg atttttctac caagtttcgc aagttgtatt atttgttggt cagttaatgt
     3301 ttgcttggtt tgttgtgatt tttcaagtat gcgagtctcc gttccacctt cttttaaact
     3361 gtaaatggcg agttttttag tagcgattat tttgttcgta atagtatttt ctcggactgt
     3421 gtatgagtca gcagaaacta aaccggaaac aagcgcttca cctagcccga aactggcatc
     3481 gatagagagg gatttgcgat tcgatgtaat tggatcagcc gtaaatagga ttccggatgc
     3541 ttcgggggaa atcatttgtt gaataacgac ggcaagttgg actttacgat gatcgaactg
     3601 attttgaatg cgataaataa tcgcgcgttc ggtaaacaaa gaagcccagc acatactgat
     3661 atgttgtaat aaggcatctt taccaataat atttaaatac gtatcatgtt gcccagcgaa
     3721 ggaagcgtgg ggaaggtctt cggcagtggc gctagaacgt acggcgaaag gcatctcata
     3781 cccacccaca tctaaaagcg tagcatccat ataactcgct atttcagagg ggatttgtgt
     3841 atgttgaata agcgttcgaa tcgtttcgct gatttctcta atagcatcca tgtcacttgt
     3901 ttttagggaa gaaaggcgtt ggagcagttg cgtaaattca ttgttttccg ctaaggttcg
     3961 cttgtaagct tctgttgtca ggcaaaaacc tgcgggaaca tgtactcctt cgatataaga
     4021 gcaagcacct aaattcattc ctttaccacc gacaagtgct tctgaatgcg gtcgtatttc
     4081 ttgaaacttg agtacatatg gtttcatata tttatccccc aatttttttc gaaaaataat
     4141 acttgactgt aaagaacctc ttgttgtata attaaagt
//
LOCUS       DASDYO010000180         4111 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.181, whole genome shotgun sequence.
ACCESSION   DASDYO010000180 DASDYO010000000
VERSION     DASDYO010000180.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4111)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4111)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4111
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.181"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..628
                     /locus_tag="U0290_002844"
     CDS             <1..628
                     /locus_tag="U0290_002844"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464267.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2302872.1"
                     /translation="LKEFPDYYKYVTKKTYTVNEKIIFEDEKAKSIFFIVEGYAAVEL
                     EDNLRKTNYISIFVLPYNVLGIDAFSSYPKKKHSITVMSEHLMLYKIDADFLLNILSI
                     KPDVNDFLLTSIADVFARHYALLGMIAKTPKERIYMALENLAVEMGTEDEERNEIVLP
                     NFINQSVLARYCRTTQPNISNLLTELVEEEFLVNKKSPYRIDKDSLDI"
     gene            complement(642..950)
                     /locus_tag="U0290_002845"
                     /pseudo
     CDS             complement(642..950)
                     /locus_tag="U0290_002845"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464266.1"
                     /note="internal stop; incomplete; partial in the middle of
                     a contig; missing N-terminus; Derived by automated
                     computational analysis using gene prediction method:
                     Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="glycoside hydrolase family 1 protein"
     gene            complement(1015..1524)
                     /locus_tag="U0290_002846"
     CDS             complement(1015..1524)
                     /locus_tag="U0290_002846"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464260.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302873.1"
                     /translation="MLNENIKAIRKSKGLSQEEIAIKLNVVRQTISKWEQGLSVPDSD
                     MLISISEVLETPVSTLLGETVMVSKVDDVKAISEKLEIINLQLAQRKTARRKMLYWLF
                     VSLCAVIAIISSVFIILNSPYLGWDYSDPETSVIGVAFHTFEWLFVRLAPIILIGGVV
                     GIFLTRKNV"
     gene            complement(1801..3705)
                     /locus_tag="U0290_002847"
     CDS             complement(1801..3705)
                     /locus_tag="U0290_002847"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464259.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2302874.1"
                     /translation="MKKAFLCLSAVVLSLNFVWVNPLSGLASKIETTKLKSTMDTNQQ
                     VNLKNNATDIVTSEDLGGQTWLINEVNRQLAPKKVGVDLTFDDLAKIKIISLSNKSLT
                     GEVPPEIKNLVSLEKLLLYSNKLSGEIPAELGELTNLSELRLDYNQFTGKIPDGLGKI
                     SSIALQNNELVGQIPLSLYENRTGTNEVNVSGNQVTINSREPEPSIYSYSTFIYPATT
                     PQYSGHLTATTTYFSNVTNDTLLTPFLSGSSTFIDLHAEFMLDRELFEGHEVTITDES
                     SGKILYEGELNSDISISLKSFSSGYHNIRVVLDNAPNNPQNQVTFGISMASTVAGDLT
                     VNYVDEDGKTIHDPQIVSGFVGDDYDVTTPDYELVIDGYELDTSKLPTNGMGTFDYAP
                     LSVTYVYKKMEGAPVTVKYVDENGNEITTSDTLTGKLDDSYHAKAKEITGFTLDNSKL
                     PVNASGVFETNPQTVTYVYNAVPAKIKAHDSTIYVGDTWSAEDNFDSAVNSVGAAVSF
                     DDVKVEGKVDTTKAGVYPVTYSFSGEAVTINVTVKAKVIPAPPVTPVQPINPDQPNIP
                     NTPSVDQTHVAKPGNLKVTKTQPTVAGKIKLPTTGDNLWDSVLYSVFGLIAVCVAFSL
                     FFWRKKQKHS"
BASE COUNT         1286 a          790 c          642 g         1393 t
ORIGIN      
        1 tttaaaagaa tttccagact actataaata tgtaacgaag aaaacctata ccgtaaatga
       61 aaaaataatt tttgaagatg aaaaagcgaa aagtatcttt tttatcgtgg aaggttatgc
      121 tgcagttgaa ttagaggata atttaagaaa aacgaactac atttccatct ttgttcttcc
      181 atataatgtt ttaggaattg atgcattttc ctcttatccg aaaaaaaagc atagtattac
      241 ggtcatgagt gaacatttga tgctctataa aatagatgct gactttttac tcaacatatt
      301 atcgattaaa cctgatgtaa atgattttct cttaacaagt attgctgacg tttttgctcg
      361 tcactatgcg cttcttggta tgattgcaaa aacgccgaaa gaacggattt acatggcttt
      421 agaaaatctt gcggtagaga tgggcactga agatgaagaa agaaatgaaa ttgtattacc
      481 aaactttatc aatcagtcag ttcttgcaag atattgccgc acaacgcagc caaacatatc
      541 caatttacta accgaacttg tagaagaaga atttttggtc aacaaaaaaa gcccttaccg
      601 gattgataag gactctttgg atatatgaga ttgatattaa tttaataact taaatcattt
      661 ccattagttt caattacttt tttataccaa tagaaacttt tcttcttcaa acgtttatag
      721 ctattatctt tatcaacatc aacaaagcca tatcttttct cgaaaccttc acgtgttgaa
      781 taaagagcta ttattcacta aattagataa acgtttatgt cacaaccttc ttcaatggct
      841 tcttgcatac gcgcaatatg tgaggccaaa taatcaattc ggtacgtaga atcaattgtc
      901 tagccccgtt cggttgtttg acaatatggg tttggtgctt tgattccgtt cctttttaca
      961 aacagtaatt ttgaagtctg actcatccct aaaagcatcc aagatagtac gcttttatac
     1021 gttcttccgc gttaaaaaaa tcccaacgac tcctcctata aggataatcg gtgctaaccg
     1081 gacaaacaac cattcaaatg tatgaaaagc tactccgata acgctagttt cagggtcact
     1141 ataatcccaa cctaagtaag gactatttag tattataaag accgaagaaa ttattgctat
     1201 aacggcacac aacgagacaa atagccaata aagcattttt cgtctggcgg tctttctttg
     1261 tgcaagctgt aagtttataa tctccagttt ttcggagatc gcttttacgt catcaacctt
     1321 tgaaaccata acagtttctc caagcaaagt gcttactggt gtttcaagca cttccgatat
     1381 ggagattaac atatcagaat caggaactga caatccttgc tcccatttag agattgtttg
     1441 tcgcaccaca ttcagtttga tggcaatttc ttcttgcgaa agtccttttg atttcctgat
     1501 tgctttaata ttttcgttta acattagaga tacccacctt tcttccagtt gttatcacta
     1561 ttgtatgaga actcgtccat tgctacaagc aacgcatatt aacattcaaa ctttatagcc
     1621 acgatatgca gttttgtatt tactatcaca tccatagtac ctttcaatca taaaaatatt
     1681 attttgcttt ctttaattca gaataggacg taaagttatt ttttgctggt ataccgtttt
     1741 tagttggtat ctctttagca cattaccctt ttaaaatagg cagcctagtt ctaatatatt
     1801 tcagctatgc ttttgctttt tacgccagaa gaataaacta aatgcgacac atactgctat
     1861 taaaccaaat acactataca gcacactatc ccaaagatta tcccctgtag ttggtagttt
     1921 tatttttcct gctactgtag gttgtgtctt tgttaccttt aaatttccag gttttgcaac
     1981 gtgagtctga tctacgctag gtgtatttgg aatgtttggt tggtctggat taattggttg
     2041 aacaggtgtt actggtggtg ctggaataac tttagctttt acagttacat taatagtcac
     2101 agcttccccg gaaaaactat aagtaaccgg ataaacacct gcttttgtcg tgtctacttt
     2161 cccttctact tttacatcat caaaggaaac tgcagctcca acagaattta ctgcgctatc
     2221 aaaattatcc tctgcgctcc atgtatctcc tacgtaaatc gtggaatcat gcgctttaat
     2281 ttttgcaggt actgcattat acacgtaggt gactgtttgt ggatttgttt caaaaacgcc
     2341 gcttgcattg actggtagct tactattatc taatgtaaat ccagtaattt ctttcgcttt
     2401 tgcgtgataa gaatcatcta gttttccggt caaagtgtca gaagtagtga tttcgttgcc
     2461 gttttcatct acgtatttta ctgtgacagg tgcgccttcc atttttttat agacatacgt
     2521 gacagatagt ggcgcgtagt caaaagtgcc catcccattg gttggtaatt tggaagtatc
     2581 taattcgtac ccatcaatta ctaattcgta gtcaggcgtt gttacatcat aatcatcacc
     2641 tacaaatcca ctaactatct gtggatcatg aatcgttttt ccatcttcat ctacatagtt
     2701 aactgtcaaa tcaccagcca ccgtacttgc catgctgata ccaaaagtta cttggttttg
     2761 tgggttgttc ggcgcattat caagtacaac tcgaatatta tgatagcctg agctgaaact
     2821 tttcaaagaa atactaatgt cagaatttaa ctcaccttcg taaagtattt taccagaaga
     2881 ctcatctgta attgttacct catgaccttc aaaaagttcc ctatctaaca taaactccgc
     2941 atgcaaatca ataaaagtag aactgccaga aagaaaagga gtaagcaatg tatcattcgt
     3001 tacgttgcta aaataagtgg ttgttgccgt caaatgccca ctatattgag gtgtagtcgc
     3061 tggataaata aaagttgagt aggagtaaat acttggttcc ggctctctac tattaatggt
     3121 cacttggtta cctgatacat ttacttcatt tgttcctgtt cgattttcgt ataagctcaa
     3181 aggaatttgg ccaaccagtt cgttgttctg taacgcaatt gacgaaatct ttccaagtcc
     3241 atcaggaatt tttccagtga attgattgta gtctaatcga agttctgata aattcgttaa
     3301 ttcccctaat tcagcaggaa tctctcctga tagcttatta gaatataaaa gcaatttttc
     3361 aagagatact aaatttttaa tctccggtgg tacttcacca gtaagcgatt tattactcaa
     3421 tgaaatgatc ttaattttag ccaaatcgtc aaatgttaaa tccacaccga cctttttagg
     3481 cgctaattgt ctgtttactt cattaatcaa ccacgtctgc cctcctaaat cttccgaagt
     3541 aacaatatcg gttgcattat ttttcaaatt aacttgttgg tttgtatcca ttgttgattt
     3601 caattttgtt gtttcgattt tggatgccaa cccagaaagt gggttaaccc acacaaaatt
     3661 taatgacaaa acaacagcgg ataggcatag aaacgctttt ttcattcgtg tataacctcc
     3721 agtaatattt attactccta aaattatacg ctaaacagcc actcaaaaac gccttcctaa
     3781 gtagcaaaat ttcctattta tgaacatttc ttgaacgttt tatatcacaa aaacagtatt
     3841 tcattccatt ttcaagtaat tatttttgac acattttcac gaataaaaac gaaaataatt
     3901 tactataaaa aatctaatta gcaaagattc aaaagtacga aagtaattga tattacttat
     3961 ttccaattaa aatacaactc aaaaaaaaag cgtttcaaaa gataattcca acattttcaa
     4021 aacatcccaa atcatcgaaa tccacttgaa ttcaacctcg tttttggata aagttacact
     4081 tttatccatt tttacaattt tgtcaaaaaa a
//
LOCUS       DASDYO010000181         3602 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.183, whole genome shotgun sequence.
ACCESSION   DASDYO010000181 DASDYO010000000
VERSION     DASDYO010000181.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3602)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3602)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3602
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.183"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..290)
                     /gene="ssb"
                     /locus_tag="U0290_002848"
     CDS             complement(<1..290)
                     /gene="ssb"
                     /locus_tag="U0290_002848"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466046.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="single-stranded DNA-binding protein"
                     /protein_id="HEM2302875.1"
                     /translation="MINQVTLVGRLTKEPELKWTAEDRAVLNLTFALNRFGKNKRVDN
                     DADFIQCVIWGKRAEATAEFCAKGQLVGVVGELQSRNYLNKEEQKIYITEVLV"
     gene            complement(541..975)
                     /gene="fabZ"
                     /locus_tag="U0290_002849"
     CDS             complement(541..975)
                     /gene="fabZ"
                     /locus_tag="U0290_002849"
                     /EC_number="4.2.1.59"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466047.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="3-hydroxyacyl-ACP dehydratase FabZ"
                     /protein_id="HEM2302876.1"
                     /translation="MLDIKKIKEILPHRYPFLLVDRVISVEEGKKVTAIKNVTANEEF
                     FNGHFPEYPVMPGVLIVEALAQTSGIAMMQSEANKGKIGLFAGIDGCRFKRQVVPGDQ
                     LLLEAEITRMRGAIAKAKVKATVEGDLVCEAEIMFALSDLPK"
     gene            complement(998..1993)
                     /gene="mreB"
                     /locus_tag="U0290_002850"
     CDS             complement(998..1993)
                     /gene="mreB"
                     /locus_tag="U0290_002850"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein MreB"
                     /protein_id="HEM2302877.1"
                     /translation="MAKDVGIDLGTANVLIHVKGRGIVVNEPAVVAINNKTGQVLAVG
                     TEARDMVGRTPGDITAIKPMKDGVIADFDIVQEMLRFFIQKLNLKTFFSRPRILICCP
                     TNITSVEQKAIREVAEKSGGKQVFLEEEPKVAAIGAGMEIFEPSGNMIIDIGGGTADV
                     AVLSMGDIVTSQSVKVAGNKWDADILNYVKRKYNLLIGERTAENIKVTIGTACQGAKE
                     EKMEIRGRDLVSGLPKTISITSSEVEEAIHDSLHLMVLAAKQVLEQTPPELSADIIDR
                     GIIMTGGGSLLHGLDELMSEQLKVPVLITENPLDVVALGTGILLDSLTNKKRNRF"
     gene            complement(2156..3448)
                     /gene="murA"
                     /locus_tag="U0290_002851"
     CDS             complement(2156..3448)
                     /gene="murA"
                     /locus_tag="U0290_002851"
                     /EC_number="2.5.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylglucosamine
                     1-carboxyvinyltransferase"
                     /protein_id="HEM2302878.1"
                     /translation="MEKIIVRGGKQLNGSVKMEGAKNAVLPVIAATLLASKGTSVLKN
                     VPNLSDVFTINEVLKYLNADVSFVNDEVTVNATGEITSDAPFEYVRKMRASIVVMGPL
                     LARTGSARVALPGGCAIGSRPVDLHLKGFEAMGAIVKIENGYIEATAEKLVGAKVYLD
                     FPSVGATQNIMMAATLAEGTTVIENVAREPEIVDLANFLNQMGARVIGAGTEVIRIEG
                     VKELTATEHSIIPDRIEAGTFMIAAAITGGNVLIEDAVPEHISSLIAKLEEMGVQIIE
                     EENGIRVIGPDKLKAVDVKTMPHPGFPTDMQSQMMVIQMLSEGTSIMTETVFENRFMH
                     VEEMRRMNADMKIEGHSVIISGPAKLQGAEVAATDLRAAAALILAGLVADGYTQVTEL
                     KYLDRGYNNFHGKLQALGADVERVDDSKIDVTNLASLF"
BASE COUNT         1112 a          785 c          507 g         1198 t
ORIGIN      
        1 actaaaactt ccgtaatata aattttctgt tcttctttat ttaaataatt ccgagattgt
       61 agttcgccaa ctactcctac taattgtcct ttagcacaga actctgcagt ggcctctgct
      121 cttttacccc aaataacaca ttgaataaag tcagcatcat tatcaactct tttattttta
      181 ccaaaccgat ttaaagcaaa ggttaaattc aaaacagccc tgtcttccgc ggtccatttc
      241 aattctggtt ccttagttaa tctgcctact aaagttactt gattaatcat ataatcgcct
      301 ctttcttttg atgtaaagcg attgtattag ataaaaagtt tattgtaaaa tagctaaaac
      361 tgtattttca ctaggtagaa accttccaaa agattatttc ctctaaaaga aaaacatcat
      421 tttatgtagt taatgacatc caaagcatca ttttagtact ttgaaaaaat ttttaaccaa
      481 tgttattctg agaacatgaa aaaagcacta aaacccattt ggacctcagt gctaatcttt
      541 ttatttaggt aggtctgata aggcaaacat aatttcagct tcacaaacca aatcgccttc
      601 tacagttgct ttgacttttg cttttgcaat cgcgcccctc atccgagtta tttcagcctc
      661 aagcaagagt tggtcccccg gaacaacttg acgtttaaat cggcaaccat caattccagc
      721 aaataaacca attttacctt tatttgcttc actctgcatc attgcaattc cactagtttg
      781 cgctagagct tccactatta aaactcctgg cattacagga tactcaggaa agtgcccgtt
      841 aaaaaattct tcatttgctg ttacattctt aatagcggta acttttttgc cttcttcaac
      901 agaaataact ctatctacta acaaaaatgg ataacgatga ggcaaaatct ctttgatttt
      961 cttaatatct aacatataca tcccccaaaa ttcacattta gaatctatta cgctttttat
     1021 ttgtaagtga gtcaagtaaa atgccggtac caagtgccac tacatctaaa ggattctcag
     1081 taattaaaac tgggaccttt agctgttcgg acattaattc atctaaacca tgtaataaag
     1141 atccaccacc agtcatgatg attcctctat caataatatc cgctgaaagc tctggaggtg
     1201 tttgttccaa cacttgttta gcagctagga ccattaggtg taatgaatcg tgaatcgctt
     1261 cctccacttc agaacttgta atagaaattg ttttcggtaa gccactcact aaatctctac
     1321 cacgaatttc cattttctct tctttggctc cttgacatgc agtaccgatt gttactttaa
     1381 tattttcagc cgttctttca ccaataagta agttatattt acgtttaaca taatttaaaa
     1441 tatctgcgtc ccatttgttt ccagcgactt ttactgattg actagttaca atatcaccca
     1501 tagacaatac agcaacatcc gcagtacctc caccaatatc aataatcata ttaccggaag
     1561 gctcaaaaat ctccataccc gctccaatag cagcaacttt aggttcttct tctaagaaca
     1621 cttgttttcc accacttttt tcagcaactt cgcgaattgc tttttgctcg acagaagtta
     1681 tatttgttgg acaacaaatt aaaatacgtg gccgtgaaaa aaaagttttt aaatttaact
     1741 tttgtatgaa gaaacgcaac atttcttgca caatatcaaa gtcagcaata accccatctt
     1801 tcataggttt aattgccgta atgtctcctg gagttctacc aaccatatct cttgcttcag
     1861 tcccaacggc taaaacttgt ccagttttat tgttaatagc gacaactgca ggttcattaa
     1921 cgacgattcc tcttccttta acatgaatta atacattggc tgtacctaaa tcgataccaa
     1981 catcttttgc catttacatt ttaactcctt tcgtggtgta cacctaattt tacatctcat
     2041 tctgaattat agcataattt atgtgcggct gaaatgtata ttttatagca atgcggaatt
     2101 tttcatgaca aataaaaaaa ccgcatcaag aagatacggt ttttaacatt taaatttaga
     2161 ataaagacgc taagtttgtt acatcgattt tggaatcatc tacacgttcc acatcagcac
     2221 caagcgcttg tagtttgccg tggaaattat tatagccacg atcaaggtat tttaactcag
     2281 ttacttgtgt atagccatct gcaactaaac cagcaagaat aagcgctgct gctgcacgta
     2341 aatctgtcgc agcaacttct gctccttgta atttagctgg gccagaaata ataacagaat
     2401 gtccttcaat tttcatatca gcgttcattc tacgcatttc ttctacatgc ataaaacgat
     2461 tctcaaaaac agtttcagtc atgatgcttg ttccttcact cagcatttga ataaccatca
     2521 tttgcgattg catatctgtt ggaaaacctg ggtgtggcat cgttttaaca tccacagctt
     2581 ttaatttatc aggaccaatt acacgaatcc cattctcttc ttcaatgatt tgaacgccca
     2641 tttcttcaag tttagcaatt aacgaactaa tatgctcggg aactgcatct tcaattaaaa
     2701 catttccacc agtaatcgca gcagcaatca taaatgttcc tgcttcaata cggtctggaa
     2761 taatagaatg ttcagttgca gttaattctt taactccttc aattctaatt acttctgttc
     2821 ctgcaccgat aactctagca cccatttggt taaggaagtt tgctaagtcg acaatttcag
     2881 gttcacgagc cacgttttct attactgtag taccttctgc tagagtagca gccatcataa
     2941 tattttgtgt cgctccaaca cttgggaaat ctaagtatac tttagcacca actaattttt
     3001 cagcagttgc ttcaatatag ccattttcaa ttttcacgat tgcgcccatt gcttcaaaac
     3061 cttttaaatg taagtcaact ggtcttgagc caattgcaca tccaccaggt aaagctacac
     3121 gtgctgaacc agtacgtgcc aaaagtggtc ccattacaac aatggaagca cgcattttac
     3181 gaacgtactc aaaaggtgca tcagaagtga tttctcctgt tgcattgact gttacttcat
     3241 catttacaaa agaaacatct gcatttagat atttaagaac ctcattgatt gtgaatacat
     3301 cagacaagtt tgggacattt tttaatacgc tagtaccttt actcgcaagt aatgtagcag
     3361 ctattaccgg taatacagca ttcttggcac cttccatttt cacagaacca tttaactgtt
     3421 ttccaccgcg tacaataatt ttttccaaaa agaacccctc cgcgttacta ataactaaat
     3481 catttatcga attttattaa tcaaaatttg aatttaaaac atatctaagt aattctacca
     3541 cttatcaccc taaaatatca actgatttta acgtaatatt aaagttgtta taagcttcta
     3601 tt
//
LOCUS       DASDYO010000182         3502 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.184, whole genome shotgun sequence.
ACCESSION   DASDYO010000182 DASDYO010000000
VERSION     DASDYO010000182.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3502
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.184"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            137..334
                     /locus_tag="U0290_002852"
     CDS             137..334
                     /locus_tag="U0290_002852"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724638.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2302879.1"
                     /translation="MSKSIFIKTDEVAKELGVSYSFASKLVRNLNKDLDERGFITIAG
                     RVSRKYYEEKLYGEIQKEGGN"
     gene            337..1410
                     /locus_tag="U0290_002853"
     CDS             337..1410
                     /locus_tag="U0290_002853"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003532932.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="site-specific integrase"
                     /protein_id="HEM2302880.1"
                     /translation="MAAFKDKNGTWFTSFRYINWQGEKKQKVKRGFSTRKEALEWERQ
                     FLQQKTADLTMTFLSFWEIYKKDMKNRIRESTWETKISIVERKILPYFKNRKMSEIAP
                     KDIIQWQNEMISYRDKNGKAYSPVYLKTLHNQLSAMFNHAVRFYELKSNPARKAGNMG
                     KEKSVEMLFWTKEEYQKFSDSMMDKAISFYAFEILYWCGIRLGELLALTASDFDFNKG
                     TLSISKSCQRLKGMDVITEPKTPKSNRIIQMPEFLGEEIQEYIQSIYKWEPDERLFPI
                     TKSYLHSEMTRGAKEQKIKRIRIHDLRHSHVSLLIDSGFSAVAIADRLGHESIDVTYR
                     YAHLFPTKQMEIANMLDNLKGEY"
     gene            1412..1723
                     /locus_tag="U0290_002854"
     CDS             1412..1723
                     /locus_tag="U0290_002854"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724640.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="mobilization protein"
                     /protein_id="HEM2302881.1"
                     /translation="MSVKTLDGKGRWRNKIVAFRVSPEENEHLNKLVKLSGLNKQEYL
                     IHRILMEEITVNYNPRVFKAFRNQINEFSELLKDTQPVDKETAELMAYTIDLLQKFRE
                     E"
     gene            1909..2250
                     /gene="mobC"
                     /locus_tag="U0290_002855"
     CDS             1909..2250
                     /gene="mobC"
                     /locus_tag="U0290_002855"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="plasmid mobilization relaxosome protein MobC"
                     /protein_id="HEM2302882.1"
                     /translation="MVNRNRNIDLKFRVTEEEKAFIEMKMKEAGITNREAYLRKMAID
                     GAIIVSNYDETKKLTLELNKIGTNINQIARIANTDNKISKDNIKKIEEMMQKVWQLQR
                     YGLSKKRSIKQ"
     gene            2199..>3502
                     /locus_tag="U0290_002856"
     CDS             2199..>3502
                     /locus_tag="U0290_002856"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724755.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="relaxase/mobilization nuclease domain-containing
                     protein"
                     /protein_id="HEM2302883.1"
                     /translation="MAVTKIWSIKKTLDKAMKYILNPIKAKYVYSYACAPETADLEFE
                     LTLDQNSHSGGINKAYHIIQSFKPEETTPEQAHEIGKQLLEQHLKGKYEYILTTHIDK
                     EHIHNHVIFCASSFVEHKKYNDCMKTYYQLREASDTLCAEHDLSVIPPNQNKGKSHYE
                     WQMDQQGNSWKAQLRTSIDMCIKNSKTFDDFASQMQTQGYEIKYGKHIAFRAEKQKRF
                     TRAMQLGGNYTEENIKLRIAQKDKLPIKKAKKINLKNEPLSVMVALENNKKVIESKGY
                     EHWAKLHNLKQSAKTVNLLKELGISSIEEWEQKKISNQEIMNANMAEIKVIEKELANK
                     KFILKQLITYEDTKGIYHSADKQLLNTKEPQSAIQLYKTAVKALKQVNIKPSKQIKDE
                     LYRQIQSLQNQQQELYKKHKNCKKNQKQDRIIDRNLTQISTK"
BASE COUNT         1443 a          483 c          649 g          927 t
ORIGIN      
        1 aaatagaaag caaaatcaat aaaaactaaa caaaaaagtt taatttcact ttacttaaac
       61 aaaaatgttt agtataatat ttatgttaaa caaataagtt tagtttaatt gattttatac
      121 agtgaggagg aactaaatga gcaaatcaat tttcatcaaa acagatgaag tagcaaagga
      181 gttaggggtt tcttattctt ttgctagtaa gttagtgaga aatttaaata aagatttaga
      241 tgaacgtgga tttatcacaa ttgctgggcg cgtcagtaga aaatattatg aagaaaaatt
      301 atatggagaa atacaaaaag aaggaggaaa ttaacattgg cagcattcaa agataaaaac
      361 ggtacctggt ttacgtcatt tcggtatatt aattggcaag gtgaaaaaaa gcaaaaagtg
      421 aaacgaggat tctctacaag aaaagaagca cttgaatggg aacgacaatt tttacaacaa
      481 aaaacagcag acttaacaat gactttcctg tccttttggg aaatttataa gaaggatatg
      541 aaaaatagaa ttagagagag tacttgggaa actaaaataa gtattgtaga aagaaagata
      601 ttaccgtatt tcaagaatag aaaaatgagt gagattgcac caaaagatat tatccaatgg
      661 cagaatgaaa tgatttctta tcgagataaa aacgggaaag cttattctcc tgtgtatcta
      721 aaaacgcttc acaatcaatt gagtgcgatg tttaatcatg cagtacgatt ttatgaatta
      781 aagtctaacc cagcgagaaa agcaggtaat atgggaaaag agaaaagcgt ggagatgtta
      841 ttttggacga aagaagaata ccaaaaattt tcggactcca tgatggataa agcaatatca
      901 ttttatgctt ttgaaatttt atattggtgt ggaattcgac taggtgagtt acttgctctt
      961 actgcttcag attttgattt taataaaggt acactatcca tttcgaaatc ttgtcagcgt
     1021 cttaagggta tggatgtgat aaccgaacca aaaactccta aaagtaatcg tatcatacaa
     1081 atgccagaat ttttgggaga agaaattcaa gagtatattc aatctattta taaatgggag
     1141 ccagatgagc gtttgtttcc aataacaaag agttacttgc acagtgaaat gacaagagga
     1201 gctaaggagc aaaaaataaa acgcatacgc atccatgatt taagacattc gcatgtatca
     1261 cttctaatag atagcggatt ttcagcagtg gcaattgcag atcgcttggg acacgaaagt
     1321 atagatgtta cgtatcgtta tgcacaccta tttccaacca aacaaatgga aattgcaaat
     1381 atgttagaca acttaaaagg agagtattaa tatgtcagtt aaaacattag atggaaaagg
     1441 acgttggaga aataaaatag ttgcatttag ggtatcacca gaagaaaatg aacacttaaa
     1501 taaactcgtg aaattgtcag gtttgaataa acaagaatat ttaatccata gaattttaat
     1561 ggaggagata actgtaaatt ataatccgag ggtatttaaa gcatttcgaa accaaataaa
     1621 tgagtttagt gagctactaa aggatactca accagtagat aaagaaacag ccgagttaat
     1681 ggcttacaca attgacttgc ttcaaaaatt tagagaagag tgaatttcat tcttcttttt
     1741 attatcacgt aaatttgaaa agtaatagag aagcaagcac tggatatggt accccatatc
     1801 caaattccac cccgtttcgc attcgcgact cgtgtttgaa attgcttgtt ggggaaatcc
     1861 ccaaacccct tgtttttaaa attaaattgg aaaggaagaa agtgaaaaat ggtaaatagg
     1921 aatcgaaata ttgatttgaa atttagagtt actgaggaag aaaaagcatt cattgaaatg
     1981 aaaatgaaag aagcgggaat aacgaaccgt gaagcatatt taagaaagat ggcgattgat
     2041 ggagcgatta ttgtttcaaa ttatgatgaa acgaaaaaac ttactttgga gctaaataaa
     2101 attggtacga atattaatca aattgcacga atagcaaaca cagataataa aatttcaaaa
     2161 gataatatta aaaaaataga ggagatgatg caaaaagtat ggcagttaca aagatatggt
     2221 ctatcaaaaa aacgctcgat aaagcaatga aatatattct aaatccaatc aaagctaaat
     2281 atgtttatag ttacgcctgc gcaccagaaa ctgccgactt ggagtttgaa ttaacattag
     2341 accaaaatag tcactcagga ggtattaata aagcttatca tattattcaa tcgtttaaac
     2401 ctgaggaaac taccccagaa caagcacatg aaatcggcaa acaattactg gaacaacact
     2461 taaaaggtaa atatgaatat atactaacga cacatataga taaagaacat atccataatc
     2521 acgtgatatt ttgcgcatct agctttgtgg agcataaaaa atataatgat tgtatgaaaa
     2581 catattatca gctgagagag gcaagtgata cattatgtgc agaacatgat ctttctgtaa
     2641 ttccgccaaa ccaaaataaa ggaaaaagtc actatgaatg gcaaatggat cagcaaggaa
     2701 acagctggaa agcacaattg agaacctcta ttgatatgtg tataaaaaat agtaagacat
     2761 ttgatgattt cgcaagccaa atgcaaacac aaggatatga gattaaatat ggtaagcata
     2821 ttgcttttcg tgctgaaaaa caaaaacgat tcacacgagc gatgcaacta ggcggaaact
     2881 acacagaaga aaatatcaaa ttacgtatcg ctcaaaaaga taagctgcca atcaaaaaag
     2941 ctaagaaaat aaacctgaaa aacgagccac ttagtgttat ggttgcattg gaaaataata
     3001 agaaagtcat cgaaagtaaa ggctatgagc attgggcgaa attgcataac cttaaacaaa
     3061 gtgcaaagac tgttaattta ctgaaagagc ttggtatttc ttctattgag gagtgggagc
     3121 agaaaaaaat aagtaatcaa gaaataatga atgctaatat ggcagaaata aaagttattg
     3181 aaaaagaatt agctaataag aaatttattt tgaagcaact cattacctat gaagatacaa
     3241 aaggaatata tcattctgca gataagcagc tactgaatac caaggaacca cagtctgcta
     3301 ttcaattgta caaaactgct gttaaggcgc ttaaacaagt taatattaaa ccgagtaagc
     3361 agataaaaga tgagctatat agacaaatac aaagtttaca gaatcagcaa caagagctat
     3421 acaaaaagca taaaaattgc aaaaaaaacc aaaaacaaga tagaattatt gatcggaatt
     3481 taacgcaaat ctccacgaaa at
//
LOCUS       DASDYO010000183         3394 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.185, whole genome shotgun sequence.
ACCESSION   DASDYO010000183 DASDYO010000000
VERSION     DASDYO010000183.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3394)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3394)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3394
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.185"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            42..1028
                     /locus_tag="U0290_002857"
     CDS             42..1028
                     /locus_tag="U0290_002857"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464946.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302884.1"
                     /translation="MIRFDNVSKKYSDDKTAAVNNVTLDIKDGEFFVFIGPSGCGKTT
                     TLKMINRLIPLTTGTIYINEKRISDYDIHELRWDIGYVLQQIALFPHMTIEENIAIVP
                     ELKKWSKEKIHDRITELLDSVGLDPESYRHRKPAELSGGEQQRVGVVRALAADPGIIL
                     MDEPFSALDPISRQRLQQDISALQKKIKKTIVFVTHDMQEALALGDRICVMQGGEIVQ
                     VATPQEIMKNPENDFVKDFLASGHAFNTPILEANFTVKDLIEADLFYSYQTSDGTLGI
                     SSAEPVENLVRRIAEEQSIPVTDEAGNFIGTVSNKHVMQFLARHLESSGELV"
     gene            1025..2539
                     /locus_tag="U0290_002858"
     CDS             1025..2539
                     /locus_tag="U0290_002858"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464947.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease/substrate-binding
                     protein"
                     /protein_id="HEM2302885.1"
                     /translation="MNTLIDTFTVRKDELFTALVQHIQISFVSLFIAVLIALPLGIYL
                     TRHKRLAEPIIQVAAIFQTIPSLALLGLLIPLVGIGIVPAIIALVIYALLPILRNTYT
                     GIKEVDPALVEASRAMGMNKWKRLYKVQLPLAMPVIMAGIRTAMVLIIGTATLAALIG
                     AGGLGDLILLGIDRNDNSLILLGAIPAALLAILFDFLLRFLEKASFKSTIITISAGIL
                     LTAAIIVVPYFASDKKEITIAGKLGAEPEILINMYKLVIEDETDLKVNVKPNMGKTSF
                     VFNALKSGDIDIYPEFTGTVLETFLKENAKTHDPEEVYTQARDGLAKDFNMSYLKPMK
                     YNNTYALAVSPEFAKENNLEKISDLGPVSDQVKAGFTLEFKDRSDGYKGIQDKYGLTF
                     SNLKTMEPKLRYNAIKSGDINLLDAYSTDSELAQYKLKVLEDDQQLFPPYQGAPLMLT
                     KTLEKYPELKKPLNKLAGKITDDEMRKMNYEVNVNGKSAYTVAKDYLKDQGIIK"
     gene            complement(2575..>3394)
                     /locus_tag="U0290_002859"
     CDS             complement(2575..>3394)
                     /locus_tag="U0290_002859"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464948.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302886.1"
                     /translation="LLKQHKRLLEQQHKLPYTINLSGEVFTIIIYTKLSKVAGVTVLN
                     SQEEPATVKEAEAVVNRIQKYNFYFEYLGKRAHVIKERDSIIAEKIEQTQLILNDNTI
                     FGEKMQPTIDELNLAMEVYKQQQRKMDVYQEDITLLNQKIKMQGEILEEDWESAENLS
                     IAFAKAAYAQSIYLEATRKNRKQLAKWFHLHQKELPTDKQKALSKMVSVLSDTNAGLV
                     FDQIISLRPLLEEGLMLDHEQSLTQRAAEFNKEFETHCRFYKPNINKVKNLIRQ"
BASE COUNT         1075 a          580 c          636 g         1103 t
ORIGIN      
        1 tgtagaacat acgtttgatt aaaaaggaaa gggatgaaaa aatgattcgt tttgataatg
       61 tatccaaaaa atacagcgat gataaaacag cagcagtaaa taatgtaact ttggacataa
      121 aagacggcga gttctttgtt ttcatcggac cgagtggttg cgggaaaaca acaacactaa
      181 aaatgattaa tcgcttgatt ccactgacaa ctggaaccat ttatattaat gaaaagcgaa
      241 ttagtgatta tgatattcat gaacttcgct gggatatcgg ctatgtttta caacaaattg
      301 cgctctttcc tcacatgact attgaagaaa atatcgctat cgttccggaa ttaaaaaaat
      361 ggagcaagga gaaaattcat gaccggatta cggaattatt agatagtgtt ggcttggatc
      421 ctgaaagtta tcgtcatcgc aaaccagctg aattatctgg tggtgaacag caacgggttg
      481 gtgttgttcg tgcccttgca gcagatcctg gaattattct gatggatgaa ccttttagtg
      541 cacttgatcc gatttctcgc caacgtttgc aacaagatat ttctgcgctt caaaagaaaa
      601 tcaagaaaac gattgtattt gttacccatg atatgcaaga ggctttagcg cttggtgaca
      661 gaatttgcgt aatgcaaggc ggtgaaattg tccaagtagc aacaccacaa gaaattatga
      721 aaaatccaga aaatgacttc gttaaagatt tcttagcatc tggacatgct ttcaatacgc
      781 caattttaga agcaaacttt acggtgaagg acttaataga agctgacctg ttttattcgt
      841 atcaaactag tgatggcaca cttggaattt catcagcgga gcctgtcgaa aaccttgttc
      901 ggcgaatcgc ggaagaacag tcaattcctg tcacagacga agcaggtaat tttatcggta
      961 cagtttcaaa taaacatgtg atgcaattct tagcgcgtca tctggaaagt tcaggtgagc
     1021 ttgtatgaat actcttatag atacatttac tgtccgtaaa gatgaactat tcacagcttt
     1081 agtacaacat attcaaattt cctttgtctc tctttttata gcggtgttaa ttgccttacc
     1141 tcttgggatt tatttaacta gacataagcg tctcgctgaa ccaattattc aagtagccgc
     1201 tatttttcaa acaattcctt ctctggcact acttggtttg ttaattccgc tcgttggtat
     1261 tgggatagtt ccagcgatta ttgcgcttgt tatttacgcc ctcttaccta ttttaaggaa
     1321 tacatatact gggataaaag aagtcgaccc agcccttgtt gaagcctcac gcgcaatggg
     1381 aatgaacaaa tggaaaagat tatacaaagt acaacttcct cttgctatgc cagtaattat
     1441 ggctggtatt cgtacagcga tggtattaat catcggtaca gcgacacttg ctgccttaat
     1501 tggtgcaggt ggactcgggg acttgattct actagggatt gaccgcaatg ataatagttt
     1561 aattctatta ggtgcaattc cagcagcgtt actagcgatt ttgtttgatt tcttactacg
     1621 tttccttgaa aaagcatctt ttaaaagcac aattattacg atttcagcag gtatcttatt
     1681 aactgccgca attatcgtcg ttccttattt tgcgtctgat aaaaaagaaa ttacgattgc
     1741 aggtaaatta ggtgcagaac cagaaatttt gattaatatg tacaaactag ttattgagga
     1801 cgaaacagat ttaaaagtta atgtgaagcc gaatatgggt aaaacgagtt tcgtttttaa
     1861 tgcattaaaa tcaggtgata ttgatattta tcctgaattt acaggaacag tgctagagac
     1921 attcttaaaa gaaaatgcaa aaacacatga tcctgaagaa gtgtatacgc aagcacgtga
     1981 tggtttggca aaagatttta atatgtctta tttaaaaccg atgaaatata ataacaccta
     2041 tgctcttgcg gtttcaccag aatttgcaaa agaaaataat ttagaaaaaa tatctgatct
     2101 tggcccagta tctgaccaag taaaagctgg attcacactg gagtttaaag accgttcgga
     2161 tggttataaa ggcattcaag ataaatatgg tctcacattc tctaacctga aaacaatgga
     2221 gccaaaactg cgatataatg caattaaatc tggagacatc aatttactag atgcttactc
     2281 aacagatagt gaactcgccc aatataaatt aaaagtccta gaagacgatc agcagctctt
     2341 ccctccttat caaggtgcac cgcttatgct gacaaaaaca ttagaaaaat acccagaact
     2401 gaaaaaacca ttaaataaac tagctgggaa aattacagat gatgaaatgc gtaaaatgaa
     2461 ttatgaagtg aatgtaaatg gcaaatcagc ttatacagtt gccaaagact atttgaaaga
     2521 tcaaggtatt attaaataaa aaagcgaagt ggtttttacg ccacttcgct ttttttattg
     2581 tctaattaag tttttgactt tattaatgtt tggtttataa aaacgacaat gtgtttcaaa
     2641 ttctttgttg aattcagcag ctctttgggt tagtgattgc tcgtgatcaa gcatcaagcc
     2701 ttcttcaagt agtggtctaa gtgaaataat ttgatcgaaa acaagaccgg catttgtgtc
     2761 acttagaaca gataccattt tacttaacgc tttttgtttg tcagtaggta attctttttg
     2821 atgaagatgg aaccattttg ctaattgttt gcgatttttt cgggttgctt ctaaataaat
     2881 actttgcgca taagctgctt tagcaaatgc aatcgataaa ttttcagcgg attcccagtc
     2941 ttcttctaga atttcacctt gcattttgat tttttgattg agtagagtaa tatcttcttg
     3001 ataaacatcc attttgcgtt gttgttgctt ataaacctcc atcgctaaat taagttcatc
     3061 aatagttggc tgcatttttt caccaaaaat agtattatca tttaaaatca attgtgtttg
     3121 ctctattttt tcagcaataa tgctatcgcg ttctttgatt acatgtgcgc gtttgcctaa
     3181 gtattcaaaa tagaaattat acttttgaat gcgattaact actgcttctg cttctttcac
     3241 tgtggctggt tcttcttgtg aatttaatac tgtcacacca gctactttac ttaatttagt
     3301 ataaataata attgtgaaaa cttctccgct caaattgatt gtgtacggta gtttatgttg
     3361 ctgttctaaa agccttttat gttgttttaa tagt
//
LOCUS       DASDYO010000184         3183 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.186, whole genome shotgun sequence.
ACCESSION   DASDYO010000184 DASDYO010000000
VERSION     DASDYO010000184.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3183
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.186"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..173
                     /locus_tag="U0290_002860"
     CDS             <1..173
                     /locus_tag="U0290_002860"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302887.1"
                     /translation="GEEASIPEPPELTELEKLTQDYADLMLYVAEVEQKTEQTQQDNA
                     NLLLSLAEAGAL"
     gene            173..319
                     /locus_tag="U0290_002861"
     CDS             173..319
                     /locus_tag="U0290_002861"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XkdX family protein"
                     /protein_id="HEM2302888.1"
                     /translation="MINWYEKVKDYFLGGYYTEADVNKFVTLKKITRSQADEIIAMKE
                     AKAE"
     gene            356..721
                     /locus_tag="U0290_002862"
     CDS             356..721
                     /locus_tag="U0290_002862"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302889.1"
                     /translation="MYEGLTKVFDYALAKEMFFAALFVALFIILLIITKRIWDDSKIV
                     RVEMKEERDKMETEREKRDKESKEERDKFISTMNEQQRLMDKQNDMMGQQQQSIDSLS
                     KSVGKLAHKVDLLEHKITK"
     gene            734..1015
                     /locus_tag="U0290_002863"
     CDS             734..1015
                     /locus_tag="U0290_002863"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="holin"
                     /protein_id="HEM2302890.1"
                     /translation="MEFGKELLVYMTFLVVVTPVFVQAIKKTELIPSKWLPTVSIFVG
                     AILGALATFLDGSGSLATMIWAGALAGAGGTGLFEQFTNRAKKYGKDDK"
     gene            1015..1884
                     /locus_tag="U0290_002864"
     CDS             1015..1884
                     /locus_tag="U0290_002864"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740832.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase family
                     protein"
                     /protein_id="HEM2302891.1"
                     /translation="MALTEAWLIEKANRKLNAGGMYKITSDKTRNVIKKMAKEGIYLC
                     VAQGYRSTAEQNALYAQGRTKPGAIVTNSKGGQSNHNYGVAVDLCLYTNDGKDVIWES
                     TTSRWKKVVAAMKAEGFKWGGDWKSFKDYPHFELCDAVSGEKIPTATQNTNTNSNRYE
                     GKVIDSAPLLPKMDFKSSPFRMYKVGTEFLVYDHNQYWYKTYIDDKLYYMYKSFCDVV
                     AKKDAKGRIKVRIKSAKDLRIPIWNNTKLNSGKIKWYAPNVKLAWYNYRRGYLELWYP
                     SDGWYYTANYFLK"
     gene            2008..2808
                     /locus_tag="U0290_002865"
     CDS             2008..2808
                     /locus_tag="U0290_002865"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725050.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302892.1"
                     /translation="MFITIDVENILEKVGIGSTNPFKVKASDGKIYVIKIKNDACDGK
                     TLLNELIAYRLAKLLDLPISNCCLINLKKEHIEDNIFNMDGINCVEGIGFASEYMQGN
                     TRINAGMLKSIINAEDIPSIILFDQIILNTDRSENDGNLYYDKRTKKLMIIDHSHIFG
                     GWSTWNVHQIRALIKEPPAVINNLVGKNYHFFIPYVSGHSPFNKITKKIDHLAGEIDG
                     LFEDIPIEWSIDEEEIAVTKKFIRYQLENYAGILQQLKDVFYLWKGAC"
     gene            2810..>3183
                     /locus_tag="U0290_002866"
     CDS             2810..>3183
                     /locus_tag="U0290_002866"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725049.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3037 domain-containing protein"
                     /protein_id="HEM2302893.1"
                     /translation="MENFKLNYAVLQYMPDPIRREAINVGVVFHCPSRNWSEFCPIKN
                     KSRLRSFDDEYDKEYIDMMFDSFDYEFNSHIIDEYPERFNRIENENFLKENIKFYVNE
                     FRFLPVESIHTNDSEFWNDIRDV"
BASE COUNT         1173 a          434 c          669 g          907 t
ORIGIN      
        1 ctggtgaaga agcaagcatt cctgaaccgc cagaattgac cgagcttgaa aaattaacac
       61 aagattatgc ggacttaatg ctttatgtag cagaagtcga acagaagacg gaacaaacgc
      121 aacaagataa tgcaaactta ctattatctt tggcggaggc aggtgctttg taatgattaa
      181 ttggtatgaa aaagtgaaag attatttttt aggcggctac tatactgaag cagatgttaa
      241 taaattcgtt actctaaaaa agataacgag atcacaagca gatgaaataa tcgctatgaa
      301 agaagcaaaa gccgaatagg cttatttttt atgttgaaaa taggggatgg ttgggatgta
      361 tgaaggctta acgaaagtat ttgattatgc tttagcaaaa gaaatgtttt tcgcggcgct
      421 atttgtcgca ctgtttatta ttttgttgat tattactaaa agaatctggg atgactcaaa
      481 aatagtaaga gtagaaatga aagaagagcg ggacaaaatg gaaacagagc gggagaagcg
      541 ggataaagaa tcgaaagaag aacgagataa gtttattagt acgatgaacg aacaacagcg
      601 tttaatggac aagcaaaatg acatgatggg gcaacagcaa cagtcaattg atagtttgtc
      661 aaaatcggtc ggtaaattag cacataaggt agatttacta gaacacaaaa ttacaaaata
      721 aaggatgata aaaatggaat ttggaaaaga gttactagtt tatatgacat ttttagtagt
      781 tgtaacgcct gtttttgtgc aagcaattaa aaaaacagag ctaattcctt cgaaatggct
      841 tccaacagta agtatttttg ttggggccat tttaggggcc ttagcgacat ttttagatgg
      901 ttctggatcg cttgcaacaa tgatttgggc aggtgcatta gcaggagctg gcggaaccgg
      961 tttgttcgaa caatttacta atcgagctaa aaaatatgga aaggatgata aataatggca
     1021 ttaacagagg catggctaat tgaaaaagca aatcgcaaat tgaatgctgg gggaatgtat
     1081 aaaattacat cggataaaac acgaaatgta attaaaaaaa tggcaaaaga aggtatttat
     1141 ctttgtgttg cgcaaggtta ccgctcaaca gcggaacaaa atgcgctata tgcacaaggg
     1201 agaaccaaac ctggagcaat tgttactaat tccaaaggcg ggcaatctaa tcacaactac
     1261 ggggtagctg ttgacttgtg cttgtataca aatgacggaa aagatgttat ttgggagtca
     1321 acaacttccc ggtggaaaaa ggttgttgct gctatgaaag cagaagggtt taaatggggc
     1381 ggagactgga aaagttttaa agactatccg cattttgaac tatgtgatgc tgtaagtggt
     1441 gagaaaatcc ctactgcaac acaaaacact aatacaaatt caaatcgtta cgagggtaaa
     1501 gtcattgata gcgcaccact gctaccgaaa atggacttta aatcatcacc attccgcatg
     1561 tataaggtag gaactgagtt cttagtatat gatcataatc aatattggta caagacatac
     1621 attgatgata aactttacta catgtataaa agcttttgcg atgttgtagc taaaaaagac
     1681 gcaaaaggtc gcatcaaagt tcgaattaaa agcgcgaaag accttcggat tccaatttgg
     1741 aataacacaa aacttaacag cgggaaaatt aaatggtatg cacccaatgt aaaactagcg
     1801 tggtacaact atcgaagagg atatttagag ctttggtatc cgtcagacgg ctggtactac
     1861 acagctaact acttcttgaa ataaaactat tgccctcgct tttgcggggg tttttggtcg
     1921 agtagacaca tcaacaaaca tctgttccaa ttgatattga ttgtaataag aggttataat
     1981 gacataaaaa cgttttattg ggagcgggtg tttattacga ttgacgtaga aaatatatta
     2041 gagaaagttg gaattggtag tacaaatccc tttaaagtta aagcctccga tggtaaaatt
     2101 tatgtaataa aaattaagaa tgatgcttgt gacggaaaaa ctttgttaaa cgaactaata
     2161 gcatataggt tagctaagct tctagattta ccaatatcaa attgttgttt gataaatttg
     2221 aaaaaagaac atattgagga taatattttc aatatggatg gtattaattg tgtggaagga
     2281 attggcttcg caagcgaata tatgcaaggt aatactagaa taaatgctgg tatgttaaaa
     2341 agtattataa atgcagaaga tattccaagt attatcttat ttgatcaaat aattttaaat
     2401 accgatcgtt cagaaaatga tgggaattta tactatgaca aaagaacaaa aaaactaatg
     2461 attattgatc actcacatat atttggagga tggtcaactt ggaacgtaca tcaaattagg
     2521 gctttaataa aagaaccgcc tgcagtaata aataacttag tagggaagaa ctatcatttt
     2581 tttattccat acgttagcgg tcatagccct tttaataaaa taacaaagaa aatagatcat
     2641 ttagccggag aaatagatgg actttttgaa gatattccga tagaatggag tattgatgaa
     2701 gaggaaatag cagtaacaaa aaaatttatt agatatcaac tagagaatta tgctggtata
     2761 cttcaacagt taaaagatgt attttattta tggaaaggag catgttgaaa tggaaaattt
     2821 taaattaaat tatgctgttc ttcaatacat gcctgatcct atccgaagag aggccattaa
     2881 tgtaggagta gtttttcatt gcccaagtag aaattggtca gaattttgtc ctattaaaaa
     2941 taaaagtagg ctaaggtcat ttgatgatga gtatgacaaa gaatatattg acatgatgtt
     3001 cgactcattt gactatgagt ttaactcgca cattatagat gagtacccag agcggtttaa
     3061 tagaatagaa aatgaaaact ttttaaaaga aaacattaag ttttatgtca atgagtttcg
     3121 attccttcca gttgagtcaa ttcacacaaa tgattcagag ttttggaatg atatacgaga
     3181 tgt
//
LOCUS       DASDYO010000185         3105 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.187, whole genome shotgun sequence.
ACCESSION   DASDYO010000185 DASDYO010000000
VERSION     DASDYO010000185.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3105)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3105)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3105
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.187"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            29..556
                     /locus_tag="U0290_002867"
     CDS             29..556
                     /locus_tag="U0290_002867"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465212.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF402 domain-containing protein"
                     /protein_id="HEM2302894.1"
                     /translation="MYLPKEKEIIQIKSYKHNGKLHRTWKKTVVLKSTENIIIGGNDH
                     TLVVEADGRKWVTREPSICYFHSDYWFNVISMIREDGIYHYCNLGTPFAVDEQALKYI
                     DYDLDIKVFPDGRFHLLDEGEYEQHRRQMKYPDSIDRILRHNVDVLSHWILDKKGPFS
                     PDYIDIWYEKYKEYR"
     gene            complement(598..1686)
                     /locus_tag="U0290_002868"
     CDS             complement(598..1686)
                     /locus_tag="U0290_002868"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465211.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aromatic acid exporter family protein"
                     /protein_id="HEM2302895.1"
                     /translation="MKFGARILKTGIAITLALFIAQLCNSPSPSLAGISAVFAIQPSI
                     YRSYRTILERAQGNVIGAIIAIIFGLYIGNDFILIGVASIICVALLMQFRLENTIGLA
                     VVTLIIVMDSPGNDFLEIALIRFGTIMLGLLAAFIVNLFFLPPKYEVSLFQLIYNTNS
                     EIVRWIKLNLRHAADFPLLKKDMEWMQKQLNQTRNLYGLYREERTFLKKNAISKGRKI
                     AVYRQMLLCSQKGFELLKIQHRYENDYLQLPPDKQELIRQHIDYLTDKHEQLLLTYID
                     KVSIDLEYVESHLAQDPQDLMQLFLREMRETEKDEYEDMMDKYHLMRIIASVFAYQET
                     IDYLEKLIHSFKLRHTKENQIDINVNEE"
     gene            complement(1792..3090)
                     /locus_tag="U0290_002869"
     CDS             complement(1792..3090)
                     /locus_tag="U0290_002869"
                     /EC_number="5.4.3.8"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465210.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate-1-semialdehyde 2,1-aminomutase"
                     /protein_id="HEM2302896.1"
                     /translation="MDHSMSKKLHDEALLHIVGGVNSPSRSNKGVGGGIPVTMERASG
                     AYFYDVDGNKYIDYLAAFGPIITGHAHPHITEAITKAAQNGVLYGTPTKHEITFAKML
                     KEAIPSLEKVRFTNSGTEAVMTTIRVARAYTGRDKIIKFAGCYHGHFDLVLVEAGSGP
                     STLGIPDSAGVTKSTAEEVITVPFNDLASFKEALAVWSDQVAAVLVEPIVGNFGMVAP
                     EDGFLEAVNELAHANGSLVIYDEVITAFRFMYGGAQNYLGVIPDLTAMGKIIGGGLPI
                     GAYGGRIDIMEKVAPLGPAYQAGTHAGNPASILSGIACLEVLQEEGLYERFEKYGSML
                     KDGIEKAALKHGIAVTVNQIVGALTVYFTEDPVTNYAEAGATNGELFGRFFKGMLEEG
                     INLAPSKYEAWFITSAHSEADILETIQAVDTVFGKMVQDN"
BASE COUNT          985 a          650 c          558 g          912 t
ORIGIN      
        1 atagtacatg aggaaagtag gataaaggat gtacttaccc aaagagaaag aaataataca
       61 aatcaagagc tacaaacata acggaaaact tcatcgtact tggaaaaaga cagtggtgct
      121 taaatctacg gagaatatta ttatcggcgg aaacgaccac acattagttg tggaagcaga
      181 cggacgtaaa tgggtaacgc gcgaaccatc tatctgctat tttcatagtg attactggtt
      241 taatgtaatt tccatgatta gagaagacgg catttatcat tactgcaatc tagggacacc
      301 atttgcagta gatgaacaag cgcttaagta cattgactat gacctcgata ttaaggtttt
      361 cccagatgga aggtttcatt tgcttgatga gggcgaatac gaacaacacc gtcgccaaat
      421 gaagtaccca gactcaattg accggatact tcgacataat gtggatgtgt taagccactg
      481 gattttggac aaaaaaggtc cgttttcccc tgactacatt gacatttggt atgaaaagta
      541 caaagaatac cgttaaaaaa acgagctttg gagtctatct ccaagctcgt tttttgttta
      601 ttcttcattg acattaatat caatttggtt ttctttcgtg tgtctgagtt taaaactatg
      661 aattaatttt tctaaatagt cgattgtctc ttggtaagca aaaacagagg caataatacg
      721 cattaaatgg tatttatcca tcatatcctc atactcatct ttttctgttt ccctcatctc
      781 acgcaagaaa agctgcatca aatcttgggg atcctgtgct aaatgcgact ctacatattc
      841 aagatcaatc gaaactttat cgatgtatgt cagtaaaagt tgttcatgtt tatccgttaa
      901 gtaatcgata tgttgtctga ttaactcttg cttatctgga ggcagttgca aataatcatt
      961 ttcatagcga tgttggattt ttaaaagctc aaaacctttt tgagaacaaa gcaacatttg
     1021 cctatataca gcaattttcc gcccttttga aatggcattt ttctttaaaa aagtacgctc
     1081 ttctctgtat aaaccatata agttacgcgt ttgatttaac tgtttttgca tccactccat
     1141 atcttttttt agaagaggga agtccgcagc atgacgcaag tttaatttaa tccaacgaac
     1201 gatttcacta ttcgtattat aaattaactg aaacaatgaa acttcatatt tcggtggtaa
     1261 aaagaataga ttgacaataa atgccgcaag taaacctaac ataattgtcc caaaacgaat
     1321 aagtgcgatt tctaaaaagt cattaccagg agaatccatt acaataatga gtgtcacgac
     1381 tgcaaggcca atcgtattct ccaagcggaa ttgcattaat aaagcaacac agataatcga
     1441 agcgacacca attaaaataa aatcattacc aatataaagt ccaaaaataa ttgcaatgat
     1501 ggctccaatt acgttccctt gcgcccgttc taaaatagtt cgataggacc tataaataga
     1561 aggttggata gcaaaaacgg cggaaatgcc tgccagagat ggagaaggtg aattgcaaag
     1621 ttgagcgata aaaagcgcca atgtgattgc aataccagtt ttcaaaattc tagctccgaa
     1681 tttcatggaa ggttattcct ttctatagac tatttgagcg ggatttttaa gttttcccgc
     1741 tcattcttct tctattataa cgtttctcac cagtttataa agtaatatta cctagttatc
     1801 ttgaaccatt tttccaaaaa cagtatcaac tgcttggatt gtttctaaaa tatcagcttc
     1861 cgagtgtgcg gaagtgatga accatgcttc atatttagaa ggcgccaaat taatgccttc
     1921 ctctagcatt cctttaaaga aacgaccgaa taactcgcca tttgtagcgc cagcctcagc
     1981 ataattagtc acaggatctt ccgtaaagta aacagttaga gcaccgacaa tttggttaac
     2041 cgtaacagca atgccgtgtt ttagcgcggc tttttcaatg ccatctttca gcatcgagcc
     2101 atatttttca aagcgctcat acagtccttc ttcttgtaaa acttcgagac aagcaattcc
     2161 tgaaagaata gatgccggat tccccgcatg cgtcccagcc tgataagccg gtccgagtgg
     2221 tgctactttt tccatgatat caatccgacc accgtaagca ccaatcggaa gcccgccacc
     2281 aataatttta cccatagcag tcaaatctgg aataacacct aaatagttct gcgcgccgcc
     2341 gtacataaaa cggaaagccg taataacttc atcataaatt actaaagaac cattggcatg
     2401 tgcgagttca ttaacagctt ctaaaaaacc atcttctggc gcaaccattc caaaattccc
     2461 aacaataggt tctactaaaa cagcagcaac ttgatcgctc caaacagcta atgcctcttt
     2521 aaacgatgca aggtcattaa aaggtacagt aataacttct tctgcggttg atttcgttac
     2581 cccagcggag tctggaatgc caagcgtaga aggtccagaa ccagcttcca cgagtactaa
     2641 atcaaagtgg ccgtggtaac acccagcgaa tttaatgatt ttatctctgc ctgtataagc
     2701 gcgagcgaca cgaatcgttg tcataacagc ttccgtcccg gaatttgtaa aacggacctt
     2761 ctcaagtgaa ggaatggcct cttttaacat tttcgcaaaa gtgatttcgt gtttagtagg
     2821 tgttccgtac aaaacaccat tttgcgcagc ttttgtaatt gcttctgtaa tatgaggatg
     2881 tgcatgtcca gtaatgattg gtccaaacgc agctaagtag tcaatatact tattcccatc
     2941 cacatcataa aaataagcgc cgctagcccg ttccattgtt acaggaattc cgccgccaac
     3001 ccctttattt gacctagatg ggctattaac cccgccaact atatgtaaaa gtgcttcatc
     3061 atgcaatttt tttgacattg aatgatccat ttcgtcatct cctca
//
LOCUS       DASDYO010000186         3090 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.188, whole genome shotgun sequence.
ACCESSION   DASDYO010000186 DASDYO010000000
VERSION     DASDYO010000186.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3090)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3090)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3090
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.188"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..567
                     /locus_tag="U0290_002870"
     CDS             <1..567
                     /locus_tag="U0290_002870"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acid biosynthesis protein"
                     /protein_id="HEM2302897.1"
                     /translation="PFIEDDWKKDFFTNLKNSDADYFLIDLYPDVIRPVIWLNNNSAI
                     TLSYVIEQSQLLNDISYERILDHIDNETYFNEWKGYADQFIEKLTEIIPTDRVILNLG
                     GFTTSYYDEDGEVATYKNKMAIEKNNYFWERLNNYFLSKLPEAKVIDFSKKGYIGDFN
                     YPFGHSFSHFESPYYKDFLKELIYITKS"
     gene            complement(630..2954)
                     /locus_tag="U0290_002871"
     CDS             complement(630..2954)
                     /locus_tag="U0290_002871"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003730527.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2302898.1"
                     /translation="MINKKWMKIVMIPMLVVPMYGLTTVGGQLQDSLTGENSFVKEVE
                     AATTASQQAFIDKIAPAAQASQEKYHLLSSITLAQAILESGWGKSGLATQGYNLFGIK
                     GKYNGQSVIMTTSEYVNGEWIKIDAEFRKYPSWNESVTDHTLLLVNGTSWNKDLYKKV
                     VDATDYKVAAMELQKAGYATSPTYGASLIQVIENYDLAKYDVLYDKILTQKSTSGKAT
                     VTSPTGNGVWTLPYKVKGVQSVSPASTYANKDIDLVSVATTKRGTYYQFKYNGKVVGW
                     VDGKALTIYDSVNYDKVNVGRAKITSPVSNGIWSKPYNVYGREFVTNATTYAQQEIKL
                     LREAQTAKGTYYQFSINNKTIGWIDKRALTIYPYDSIISSKNVNLDGQITNPTGNGIW
                     TKAYKLEGTTSVAQATKYANKDVKISQQIETQHGTYYNISIDGKAIGWLDRNAITLYD
                     QEEYNKTVAIDAVVKNVKGNAVWTEPYRTVGTKLIGPAETYLNKEVEVVREAKTPKGT
                     YYQFKSGGKVIGWLDKKAFDVYDNINYNKAVNLDAVVENVTGNAVWTAPYKSKGIKLV
                     TSAATYKGKATKITREAQTSRGTYYEFSVDGKVIGWLDKKAFDVYDNINYNKAVNLDA
                     VVENVTGNAVWTAPYKSKGVKLVTSAATYKDKATKITREAQTSRGTYYEFSVNGKVIG
                     WLDKKAFDVYDSIEYNKAINMTGLLSNAPGNGIWTEPYRVIGTKNVGQATAYANKTVQ
                     LIREAKTTRATYYQMSVNGKIVGWVDKRAFTNVK"
BASE COUNT          901 a          599 c          459 g         1131 t
ORIGIN      
        1 ccttttatag aagatgattg gaaaaaagat ttctttacta acctgaaaaa ttctgacgct
       61 gattatttct taattgacct atatcctgat gttattcgac cagttatttg gttaaataat
      121 aattcagcta ttacattatc ttatgttata gaacaaagcc aattacttaa tgacatttct
      181 tacgagagaa ttttagatca tattgataat gaaacctact tcaatgagtg gaaaggctat
      241 gctgatcaat ttatcgaaaa acttacagaa ataattccta ctgatcgggt tattttaaac
      301 ctaggtggat ttacaacgtc ttattatgat gaagatggag aagtcgcaac ttacaaaaac
      361 aaaatggcca tcgaaaagaa taattacttc tgggaacgtt taaataatta tttcttatct
      421 aaattgcctg aagcaaaagt aatcgacttt tcgaaaaaag gctatatagg tgatttcaac
      481 tatccatttg ggcattcctt ttctcacttc gaatcccctt attataaaga cttcttgaag
      541 gaacttattt acatcactaa atcttaatct ataatcatat aaaaacagag tgagaaatct
      601 cactctgttt ttatatgatt atttttagtc tatttaacgt ttgtaaaagc tcgtttatct
      661 acccaaccaa ctattttacc atttacactc atttgatagt aagttgcacg tgtagtctta
      721 gcctcgcgta tcaactgtac tgtcttgtta gcataagcag ttgcttgtcc tacatttttt
      781 gtgccaataa ctctatacgg ctctgtccaa atgccattac ctggcgcgtt gctaagtaat
      841 ccagtcatat taatcgcttt attgtactca atagaatcat atacatcaaa agctttttta
      901 tctaaccaac cgattacttt gccgtttacg ctaaattcgt agtaagttcc tctacttgtt
      961 tgcgcttctc gagttatttt agttgcttta tctttatatg tggctgctga agtaactaat
     1021 ttaacaccct tactcttata tggagcagtc caaactgcgt tgcctgtcac attttccact
     1081 acagcatcta agttaaccgc tttgttgtaa ttaatattgt catatacatc gaaagctttt
     1141 ttatctaacc agccaatgac tttaccatca acactaaact cgtaatatgt tcctctactt
     1201 gtttgcgctt cacgagttat ttttgttgcc ttgcctttat aggttgctgc tgaagtaaca
     1261 agtttaattc ctttactctt ataaggagcc gtccaaactg cattacctgt cacattttcc
     1321 actacagcat ctaaattaac cgctttgttg taattaatat tgtcatatac atcgaaagct
     1381 tttttatcta accagccgat tactttgcca ccagatttaa attggtagta agttcctttt
     1441 ggcgtttttg cttcacggac gacttccact tctttattca agtaagtttc cgctggtccg
     1501 attaattttg taccaactgt acggtaaggt tctgtccata cagcattacc cttcacattt
     1561 tttactactg cgtcaatagc aactgtttta ttgtattcct cttgatcata cagtgtaata
     1621 gcgtttctat ctaaccaacc aattgctttc ccatcgatac tgatattgta ataagtacca
     1681 tgttgagttt cgatttgttg gctgattttc acatctttat ttgcatattt cgtagcctgc
     1741 gccacagaag ttgttccttc aagtttgtac gctttagtcc aaataccatt tccggttgga
     1801 ttagtaattt gtccgtcaag gttcacattt ttacttgaaa taatggaatc atacggatag
     1861 atagtgagag ctcgtttatc aatccaacca atagttttat tatttatgct aaattggtaa
     1921 taagtacctt tagcagtttg tgcttcgcgt aaaagtttaa tttcttgttg tgcgtaagtt
     1981 gttgcattcg taacaaattc tcttccataa acattgtatg gtttagacca gataccgtta
     2041 cttactgggc tagtaatttt agcacgtccg acatttactt tatcataatt gacactatca
     2101 taaatagtta atgctttgcc atctacccaa ccaactactt taccattata tttaaattga
     2161 tagtacgtac ctctctttgt tgtagcaaca gatactaaat cgatatcctt gttagcgtat
     2221 gtgctagctg gactaacaga ttgcactcct tttactttat acggtaaagt ccatacacca
     2281 tttccagtcg gacttgtaac agttgctttt ccggaagtgg atttttgagt aagaattttg
     2341 tcgtataaaa catcatattt ggctaaatca taattctcaa ttacttgaat taagctagca
     2401 ccatatgtag gagaggttgc atatccagct ttttgaagct ccattgcagc tactttataa
     2461 tccgttgcgt cgacaacttt cttatataag tctttattcc aagaagttcc gttcactaat
     2521 aaaagagtat ggtcagtgac agattcattc cagctagggt atttgcggaa ttcagcatca
     2581 attttaatcc actcaccgtt cacatattca gaagttgtca tgataactga ttgtccatta
     2641 tatttccctt ttataccaaa taaattatat ccttgtgtag caagtccact ttttccccaa
     2701 ccagattcta gaattgcttg agctaaagtt atactagata acagatgata tttttcttga
     2761 gatgcctggg cagcaggtgc tattttgtcg ataaatgctt gttgcgatgc tgtcgttgca
     2821 gcttcaacct ctttaacaaa ggaattttct ccagttaatg aatcttgtaa ttgtccgcca
     2881 acagttgtca aaccgtacat tggaacaact agcatcggaa tcattacaat tttcatccac
     2941 tttttattta tcattattct ccaaccactc cttaatttgt ttattgtcct aattttacca
     3001 aactttatgc ctccgtaagt tacaaattta ttacaaaaaa aataaatggt attataacaa
     3061 caaatttgtt aaacatttag acaaaatttt
//
LOCUS       DASDYO010000187         3067 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.189, whole genome shotgun sequence.
ACCESSION   DASDYO010000187 DASDYO010000000
VERSION     DASDYO010000187.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3067)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3067)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3067
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.189"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1974
                     /locus_tag="U0290_002872"
     CDS             <1..1974
                     /locus_tag="U0290_002872"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464154.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Cna B-type domain-containing protein"
                     /protein_id="HEM2302899.1"
                     /translation="IAADNFKSISNVEVNGYEASPNTGFQIDGELENPVPLAADKYAV
                     EAKATANTLDITNPVDIPQMQLYNVLFKVNYQKVKYGAKLVNQAAGSEVATVVPLNLN
                     LLKQDDISKTALTGYEFKAYYADENGKADLTKPVKDTNSNEIVMTDSSGAANFIPTGY
                     KTTSKNQEWKVVLVETKTPTGYESNENKEYPVTVKSDANGNLSIPATTETNLEITNND
                     HGATTATIDNHADVKMIDVNGAKTWTGDTEADRPDSIEVQLLQDGVAYGSPITVTKAD
                     DWKYEFKNVPETNADGNKYTYTVLENTVTNYTSAVTGLDINNTLIKPDVKMINLDGQK
                     TWKNDTENDRPASIEIQLQQNGQDYGFPVTVTKDNDWKYEFKNLPETTNDGAAYNYTI
                     VEKAVPGYATKVDGMNVINTKIDAPKTTVSGEKTWKNDTAKDRPDYIEVQLLQNGQTY
                     GDPVKVTKENDWKYSFKDLPKTDANNNAYRYSVTEIAVPGYKTTTDGMNLTNTKVTDE
                     KNVTTASGTKTWVGDNEKTRPASIEVQLLQNGKAYGTPIKVTAKSNWKYNFTNLPEKD
                     KTGEKYSYTVSEKQVSGYSVKVKGMDLTNTKVTKTTPKDTPKNTPKDTHSTNKPSKTK
                     KLPGTGDTNGMLLFAGGLVLLFLGLHLRRKSTK"
     gene            2071..2346
                     /locus_tag="U0290_002873"
     CDS             2071..2346
                     /locus_tag="U0290_002873"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464155.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302900.1"
                     /translation="MKEELLQAIEVGEPVLLVTAIGYIVGIVETKGELIRLNDVYINC
                     VSASRVNRFSRGLAVNVNQVIGMQLLSKSEKDEMIGGWKAYVAPTAG"
     gene            2389..2916
                     /locus_tag="U0290_002874"
     CDS             2389..2916
                     /locus_tag="U0290_002874"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464156.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cysteine hydrolase"
                     /protein_id="HEM2302901.1"
                     /translation="MILLVVDTQKLIMTNNLYNFDSLVPNIEQLIVTARKNKIEIVYI
                     RHDDGPNTELTEGKEGFEIYEKFQPTTLERIFDKSVNSAFKGTGLLAYLKEKGTKKIV
                     VAGLQTDFCIDATVKCGFEHGFQMIVPTHANSTEENHFMSGENSYKYYNEWMWPDRYA
                     TCISIEETINEMENN"
BASE COUNT         1210 a          554 c          583 g          720 t
ORIGIN      
        1 attgctgcag ataattttaa atctatctct aatgtagaag taaatggtta tgaggcaagt
       61 ccaaacacgg gcttccaaat tgacggggaa cttgaaaatc ctgtaccact tgctgcggat
      121 aagtatgcgg tagaagcaaa agcaactgca aacacattag atatcacaaa cccagttgac
      181 attccacaaa tgcaactata taacgttctt ttcaaagtga attatcaaaa agtgaaatac
      241 ggcgcgaaac tagttaacca agcagcaggg tcagaagttg caactgttgt tccattaaac
      301 ttaaatcttc taaaacaaga tgatataagc aaaacagcat tgacaggcta tgaattcaaa
      361 gcttattatg cagatgaaaa tggaaaagca gatttaacga aaccggtcaa agatacaaat
      421 agtaatgaaa ttgttatgac agactcatcc ggcgcagcaa atttcatccc gacaggttat
      481 aaaacaactt ctaaaaatca agaatggaaa gtagttcttg ttgaaacaaa gacaccaact
      541 ggttatgaat caaatgaaaa taaagagtat ccagttacag tgaaaagcga tgcgaatggc
      601 aacttatcca ttccagccac tacagaaaca aaccttgaaa tcaccaataa tgatcacggc
      661 gcaacaacag cgactattga caaccatgca gacgtgaaaa tgattgatgt gaatggcgcg
      721 aaaacttgga ctggtgacac agaagcagat cgcccagatt ccatcgaagt acaacttttg
      781 caagacggtg tagcatacgg tagcccaatt actgtaacaa aagcagacga ctggaaatac
      841 gaattcaaaa atgttccaga aacaaatgca gatggaaata aatacacgta tacagtttta
      901 gaaaatacag ttactaacta tacaagtgct gtcacaggtc ttgatattaa caacacgtta
      961 atcaaaccag atgtaaaaat gattaatctt gacggacaaa aaacatggaa aaacgataca
     1021 gaaaatgacc gtcccgcatc catcgaaatt caactgcaac aaaatgggca agattacggt
     1081 ttcccagtaa cagttacaaa agataacgat tggaaatacg aatttaaaaa cctaccagaa
     1141 acaaccaatg atggagcggc ttacaattac acgattgtcg aaaaagcagt tccaggctat
     1201 gcaaccaaag tcgacggaat gaacgtcatc aacacgaaaa tagatgcacc aaaaaccact
     1261 gtctctggtg aaaaaacatg gaaaaacgac acagccaaag accgtccaga ctatatcgaa
     1321 gtacaacttt tacaaaatgg acaaacttat ggtgatccag tcaaagtaac gaaagagaac
     1381 gactggaaat atagcttcaa agatctacct aaaaccgatg ctaacaacaa cgcttatcgt
     1441 tactctgtta ctgaaatagc agttccaggc tacaaaacaa ccacagatgg aatgaactta
     1501 accaatacaa aagtaaccga tgagaaaaat gtaactacag cgagcggcac aaaaacttgg
     1561 gtgggagaca atgaaaaaac acgtcccgca tccatcgaag ttcaactttt acaaaacggt
     1621 aaagcatacg gaacaccaat caaagtaaca gcaaaatcga attggaaata caactttacc
     1681 aaccttccag agaaagacaa aacaggtgaa aaatacagct atactgtatc tgaaaaacaa
     1741 gtatctggct atagtgtaaa agtaaaaggt atggacttaa cgaatacaaa agtaacaaaa
     1801 acgacaccaa aagatacacc aaaaaataca ccaaaagata cacattctac caataaacca
     1861 agtaaaacga aaaaattacc tggaactggt gatacgaatg gtatgttgct atttgctggt
     1921 ggattagtac tattattctt aggtctacac cttagaagaa aaagtaccaa ataaagaaaa
     1981 cagccgatcc gagtaagctt ggatcggttt ttcttttgaa taaagttaaa atcgggtata
     2041 caaataaaaa tgaaataagg gggcttcatg atgaaagaag aattactgca agcaatcgaa
     2101 gtcggcgagc cagttttact tgtaacagca atcgggtata ttgtaggaat tgtggaaaca
     2161 aaaggagagc ttattcgctt aaatgatgtg tatatcaatt gtgtttcagc tagcagggta
     2221 aatcgtttca gccgaggctt agctgtgaac gtcaatcaag tcatcggtat gcaactatta
     2281 agtaagtcgg agaaagacga aatgattggc ggctggaagg catacgtggc acctacagct
     2341 ggctaagcta tgatataata taaacagcac ttacggaggt ctgaacgaat gatattatta
     2401 gttgttgata cacaaaaatt aattatgacg aataatctat acaatttcga ttcacttgta
     2461 cccaatatag aacaattaat cgtcactgct cgaaaaaata aaatagaaat agtttatata
     2521 cgacatgacg acggacctaa tacagaactt acagaaggaa aagaaggctt cgaaatttac
     2581 gaaaaattcc aaccaaccac actcgaaaga atttttgata aaagcgttaa tagcgctttt
     2641 aaaggaacag gcttacttgc ttatctcaaa gaaaaaggaa cgaagaaaat tgtagtagca
     2701 ggattgcaaa ccgatttttg cattgacgcc acagtgaaat gtggttttga acatggcttc
     2761 cagatgattg ttcccaccca cgccaattcg acggaagaaa accactttat gtcgggggag
     2821 aatagttaca agtattataa tgaatggatg tggcctgatc gttacgcgac ctgcatatct
     2881 atagaagaaa caattaatga aatggaaaat aactaagaga gtctaagcat tacgcttagg
     2941 ctcttcctac ttttttgatt taatggtaga gtaaaaggag tgaattttgc aggaggaaat
     3001 gatgattaat ttaatttttg atattgatga cacagtttat gaccaattaa aaccatttga
     3061 aaacgca
//
LOCUS       DASDYO010000188         2893 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.190, whole genome shotgun sequence.
ACCESSION   DASDYO010000188 DASDYO010000000
VERSION     DASDYO010000188.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2893)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2893)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2893
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.190"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(33..986)
                     /gene="plcA"
                     /locus_tag="U0290_002875"
     CDS             complement(33..986)
                     /gene="plcA"
                     /locus_tag="U0290_002875"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463732.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phosphatidylinositol-specific phospholipase C"
                     /protein_id="HEM2302902.1"
                     /translation="MYKNYLQRTLVLVLCFILCFFTFPLGGKAYSLNNWNKPIKNSVT
                     TKQWMSALPDTTSLAALSIPGTHDTMSYNGDMTWTLTKPLAQTQTMSLYQQLEAGIRY
                     IDIRAKDNLKIYHGPIFLNASLSGVLETITQFLKKNPKETIIMRLKDEQNSNDSFDYR
                     IQPLINIYKDYFYTTPRTDTSNKIPTLKDVRGKILLLSENHTKKPLVINSHKFGMQFG
                     ASNQVIQDDYNGPSVKTKFKEIVQTAYQASKADNKLFLNHISATSLTFTPRQYAAALN
                     NKVEQFVLNLTSEKVRGLGILIMDFPEKQTIKNIIKNNKFN"
     gene            1229..2818
                     /gene="hly"
                     /locus_tag="U0290_002876"
     CDS             1229..2818
                     /gene="hly"
                     /locus_tag="U0290_002876"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463733.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cholesterol-dependent cytolysin listeriolysin O"
                     /protein_id="HEM2302903.1"
                     /translation="MKKIMLVFITLILVSLPIAQQTEAKDASAFHKENLISSMAPPAS
                     PPASPKTPIEKKHADEIDKYIQGLDYNKNNVLVYHGDAVTNVPPRKGYKDGNEYIVVE
                     KKKKSINQNNADIQVVNAISSLTYPGALVKANSELVENQPDVLPVKRDSLTLSIDLPG
                     MTNQDNKIVVKNATKSNVNNAVNTLVERWNEKYAQAYPNVSAKIDYDDEMAYSESQLI
                     AKFGTAFKAVNNSLNVNFGAISEGKMQEEVISFKQIYYNVNVNEPTRPSRFFGKAVTK
                     EQLQALGVNAENPPAYISSVAYGRQVYLKLSTNSHSTKVKAAFDAAVSGKSVSGDVEL
                     TNIIKNSSFKAVIYGGSAKDEVQIIDGNLGDLRDILKKGATFNRETPGVPIAYTTNFL
                     KDNELAVIKNNSEYIETTSKAYTDGKINIDHSGGYVAQFNISWDEINYDPEGNEIVQH
                     KNWSENNKSKLAHFTSSIYLPGNARNINVYAKECTGLAWEWWRTVIDDRNLPLVKNRN
                     ISIWGTTLYPKYSNSVDNPIE"
BASE COUNT          979 a          471 c          554 g          889 t
ORIGIN      
        1 tactaaccct ttttttgtag gaataatata tgttagttga atttattgtt ttttatgatg
       61 tttttgattg tttgtttttc ggggaagtcc atgattagaa tgcctaatcc tcgaactttt
      121 tccgatgtta agttgagtac gaactgctct actttgttgt ttaatgctgc agcatactga
      181 cgaggtgtga atgttaatga agtggcacta atatggttaa gaaacagttt gttgtccgct
      241 ttagaagctt gataagcagt ctggacaatc tctttgaatt ttgttttcac actcggacca
      301 ttgtagtcat cttgaattac ttggttggat gcgccgaact gcatgccgaa tttgtgtgaa
      361 ttaatgacta atggcttttt tgtgtggttc tctgaaagta ataatatttt tccgcggaca
      421 tcttttaatg tagggatttt attgctcgtg tcagttctgg gagtagtgta aaaataatct
      481 ttgtaaatgt tgattaatgg ttggatccga taatcaaaac tatcgttgct gttttgctcg
      541 tcttttaaac gcataataat ggtttctttt ggatttttct ttaaaaattg agtaatcgtt
      601 tctaatacac ctgaaagtga tgcatttaaa aaaattggcc catggtaaat tttgagattg
      661 tcttttgctc taatatcgat gtaccgtatt cctgcttcta gttgttggta caatgacatc
      721 gtttgtgttt gagccagtgg tttggttaat gtccacgtca tgtctccgtt atagctcatc
      781 gtatcatgtg tacctggtat agagagtgct gctaggctcg ttgtgtcagg tagagcggac
      841 atccattgct ttgtagttac agagttcttt attggcttat tccagttatt aagcgaatat
      901 gcttttccac ctaatgggaa agtaaaaaag cataaaataa aacagagtac taaaactaat
      961 gtgcgttgca aataattctt atacaaaatg gccccctcct ttgattagta tattcctatc
     1021 ttaaagttac ttttatgtcg aggcattaac atttgttaac gacgataaag ggacagcggg
     1081 actagaataa agctataaag caagcatata atattgcgtt tcatctttag aagcgaattt
     1141 cgccaatatt ataattatca aaagagagga ggggctaaac agtatttggc attattaggt
     1201 taaaaaatgt agaaggagag tgaaacccat gaaaaaaata atgctagttt ttattacact
     1261 tatattagtt agtctaccaa ttgcgcaaca aactgaagca aaggatgcat ctgcattcca
     1321 taaagaaaat ttaatttcat ccatggcacc accagcatct ccgcctgcaa gtcctaagac
     1381 gccaatcgaa aagaaacacg cggatgaaat cgataagtat atacaaggat tggattacaa
     1441 taaaaacaat gtattagtat accacggaga tgcagtgaca aatgtgccgc caagaaaagg
     1501 ttataaagat ggaaatgaat atatcgttgt ggagaaaaag aagaaatcca tcaatcaaaa
     1561 taatgcagat atccaagttg tgaatgcaat ttcgagccta acatatccag gtgctctcgt
     1621 gaaagcgaat tcggaattag tagaaaatca acccgatgtt cttcctgtca aacgtgattc
     1681 attaacactt agcattgatt tgccaggaat gactaatcaa gacaataaaa ttgttgtaaa
     1741 aaatgctact aaatcgaacg ttaacaacgc agtaaataca ttagtggaaa gatggaatga
     1801 aaaatatgct caagcttatc caaatgtaag tgcaaaaatt gattatgatg acgaaatggc
     1861 ttacagtgaa tcacaattaa ttgcaaaatt tggtacggca tttaaagctg taaataatag
     1921 cttgaatgta aacttcggcg caatcagtga agggaaaatg caagaagaag tcattagttt
     1981 taaacaaatt tactataacg tgaatgttaa tgaacctaca agaccttcca gatttttcgg
     2041 caaagctgtt actaaagagc agttgcaagc gcttggagtg aatgcagaaa atcctcctgc
     2101 atatatctca agtgtggcat atggccgtca agtttatttg aaattatcaa ctaattccca
     2161 tagtaccaaa gtaaaagctg cttttgacgc tgccgtaagt gggaaatctg tctcaggtga
     2221 tgtagaactg acaaatatca tcaaaaattc ttccttcaaa gccgtaattt acggtggctc
     2281 cgcaaaagat gaagttcaaa tcatcgacgg taacctcgga gacttacgag atattttgaa
     2341 aaaaggtgct acttttaacc gggaaacacc aggagttccc attgcctata caacaaactt
     2401 cttaaaagac aatgaattag ctgttattaa aaacaactca gaatatattg aaacaacttc
     2461 aaaagcttat acagatggaa aaatcaacat cgatcactct ggaggatacg ttgctcaatt
     2521 caacatctct tgggatgaaa taaattatga tcctgaaggt aacgaaattg ttcaacataa
     2581 aaactggagc gaaaacaata aaagtaagct agctcatttc acatcgtcca tctatttgcc
     2641 aggtaacgca agaaatatta atgtttacgc taaagaatgc actggtttag cttgggaatg
     2701 gtggagaacg gtaattgatg accggaacct accgcttgtg aaaaatagaa atatctccat
     2761 ctggggcact acactttatc cgaaatatag taatagtgta gataatccaa tcgaataatt
     2821 ttaaaaatta ataaaaaaat taagaataaa accgcttaac acacacacga aaaataagct
     2881 tgttttgcac ttt
//
LOCUS       DASDYO010000189         2882 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.191, whole genome shotgun sequence.
ACCESSION   DASDYO010000189 DASDYO010000000
VERSION     DASDYO010000189.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2882)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2882)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2882
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.191"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            64..1233
                     /locus_tag="U0290_002877"
     CDS             64..1233
                     /locus_tag="U0290_002877"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464939.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="thiolase family protein"
                     /protein_id="HEM2302904.1"
                     /translation="MKEVVIIDAVRTPIGKFGGSLKDISAVDLGATALKGVLERANIA
                     PERVDQVIFGNVLQAGLGQNVARQIAIKAGIPYKVPGVTINEVCGSGLKSVMLGRQAI
                     QLGEADIVAVGGTENMSQAPLLLNPELAGEEIDPKKLRNSMLIDGLTDVYGEYHMGIT
                     AENVAEKFSVTREEQDEFAHNSQMKAANAQEKNLFEEEIIPVKLPDGSFFEADETIRA
                     NSTLEKLATLKSVFKEGGTVTAGNASGINDGASAIILMSKEKAVAENIPYIATIKVTS
                     EVGVDPALMGYAPYYAVNEALTKGGYSIDDIDLFHLNEAFASQSVAVARDLKIPEEKL
                     NIYGGAIALGHPIGASGARIIASLLNELKHENKHIGVASLCVGGGIGIAIILEKA"
     gene            1420..2742
                     /locus_tag="U0290_002878"
     CDS             1420..2742
                     /locus_tag="U0290_002878"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464938.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2302905.1"
                     /translation="MKHTKKITFSFIIFMTILSITFNPFSAKAAPLMLNLPEPQVDQL
                     YIGDDYITGKLQQEVPMHYPGNAAYVLFNNKQYNITDYTVENDVNFRLKLPKTLEAGD
                     TLNYFTITGNVLDPVAYPGQESYKLAGPFTPIEKANIQVNYVDETNQTLATSDTLSGK
                     LGETYTTSPKAIDGYQVKETPTNATGTYTTNTETIQVNYVYEKTAVEGANVSVEYIDE
                     ATNESIAPTETLSGKIGATFQAEVKELDGYELSQVPSNQSGTYTDQPQSVIFKYKKIT
                     TPVEVAKDVTVTYKDTKGNQLADPVILKGDIGSTFETEAKSFKGYKLTKTPSNHIGSF
                     TSDSQEVDYVYSKDSSIITPPVDPVDPDKPIVINPVKPVNPATPTVPNKNIPKKKITK
                     TVNQTDKTTTASELPKTGDSENNLPLIIGVSLLISGVYIFTTRRKRVK"
BASE COUNT         1036 a          522 c          527 g          797 t
ORIGIN      
        1 ctagtgagtt tttagctagt ttcatgatat aatacggata gattacattt aaaggagatt
       61 gctatgaaag aagtagttat aatagatgca gttagaacac caattggaaa atttggtggt
      121 agtttgaaag acatcagtgc agtagacctt ggcgctaccg ctctaaaagg tgttttagaa
      181 agagccaata ttgctccaga acgggtggat caagtgattt ttggtaatgt attacaagct
      241 ggacttggcc aaaatgtagc tagacaaatc gctattaaag caggaattcc ttataaagta
      301 cctggagtca caatcaatga agtttgtgga tctggcttaa aatcggttat gcttggtagg
      361 caagcaattc agctagggga ggctgacatc gtagccgttg gtgggaccga aaatatgtcc
      421 caagcaccac ttttacttaa tcccgagcta gctggcgaag aaatcgatcc aaaaaaacta
      481 agaaatagca tgttaattga tggtttaaca gatgtttacg gcgagtatca catgggaatt
      541 actgcagaaa atgttgcaga gaaattctcc gtaaccagag aagaacaaga tgaatttgcc
      601 cataactcac aaatgaaggc cgcgaatgca caagaaaaaa acctttttga agaggaaatt
      661 attcctgtaa agcttccaga cggttcattt tttgaagccg atgaaacgat tcgcgcgaat
      721 tcaactctag aaaaattagc tactttgaaa agcgtattca aagaaggtgg aacggttaca
      781 gccggcaatg cttccggtat caatgatgga gcttccgcaa ttattttaat gtcgaaagaa
      841 aaggcagtcg cggaaaacat tccttatatc gcaacaatca aagtaacctc tgaagttggt
      901 gtcgatccag cacttatggg ttacgcgcca tactatgcag taaatgaagc tttaactaaa
      961 ggtggatatt ctatcgatga cattgattta ttccatttaa acgaagcttt tgcatcgcag
     1021 tcagttgcag tggctcgtga tttaaaaatt ccagaagaga aacttaatat ttacggtgga
     1081 gcaattgcac taggccatcc aattggagct tctggtgcac gcattattgc ctcattgtta
     1141 aatgagttaa aacatgaaaa taagcacatc ggtgtcgctt ccttgtgtgt tggtggtggt
     1201 attggtattg caattatcct tgaaaaagct tgatagtagt acatttaatg ttagtaaaaa
     1261 gctaaaatca gctaatagtt gattttagct ttttatgatt tcgtttttgt cttttttgtg
     1321 aacaaaccgc caatttgttt tgtgaaactt cttacaaaaa caagtatttg tacggttttg
     1381 gtgctagaat gtaattattc taacaagcag gaggacatta tgaagcacac taaaaaaatt
     1441 acatttagct ttattatatt tatgacaatt ctaagtatca cttttaatcc tttttcagcc
     1501 aaagcagcac ctttaatgct taatttacct gaaccacaag tggatcaact ctatattgga
     1561 gatgactata ttaccggaaa attacaacaa gaagtaccta tgcattatcc cggcaatgca
     1621 gcctatgtgc tttttaacaa taaacaatat aatatcaccg actatacggt tgaaaatgac
     1681 gtgaatttcc gtctaaaatt acctaaaacg ctggaagctg gagacacact aaactatttt
     1741 accataactg gtaacgtact tgatccagtt gcttatcctg gacaagaatc atacaaatta
     1801 gccggacctt tcactccaat tgaaaaggca aatatacaag ttaattatgt tgacgaaaca
     1861 aaccaaacac ttgcaacgtc cgacacatta tccggaaaac tcggtgaaac ttatacaaca
     1921 tctccaaaag caattgatgg ctaccaagta aaagaaacac caacaaacgc aacaggcacc
     1981 tacacaacaa acactgaaac aatacaagtg aattacgtat atgaaaaaac agcagtagaa
     2041 ggggcaaacg tatctgtaga atatatagat gaagcaacta atgaatctat cgccccaacc
     2101 gaaacacttt ctggaaaaat aggcgcgact ttccaagcag aagtaaaaga actcgacggc
     2161 tacgaattaa gccaagtgcc atcaaatcaa tcaggaacat acaccgacca accacaatcc
     2221 gttattttca aatataaaaa aataacaacg cctgttgaag tcgcaaaaga tgtaactgta
     2281 acgtataaag acactaaagg aaatcaactt gctgatccag ttattttaaa aggtgacatc
     2341 ggatcaactt tcgaaacaga agcaaaatct tttaaaggct ataaattaac taaaacacca
     2401 agtaaccaca ttggctcatt tacgagtgat agtcaagaag ttgattatgt atatagtaaa
     2461 gatagctcga ttatcacacc gccagttgac ccagttgacc cagataaacc aattgtaatt
     2521 aatcctgtaa aaccagtcaa tccagccaca ccaactgtac caaacaaaaa cattccaaaa
     2581 aagaaaatca ctaaaactgt aaaccaaaca gataaaacaa ctacagcttc cgagttacca
     2641 aaaacaggtg acagcgaaaa taatttacca ttaattatcg gtgttagttt gttaatcagc
     2701 ggagtttata tcttcactac aagaagaaaa cgagtgaaat aagttttaca aaagccttaa
     2761 tcatgattat gattaaggct tttgtaatta aatagttttg ttttaagcaa ttcttagtaa
     2821 gtatttataa taactttttt gaaagtgaga gaaggcaatg attttcctct tacttaatct
     2881 ta
//
LOCUS       DASDYO010000190         2854 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.192, whole genome shotgun sequence.
ACCESSION   DASDYO010000190 DASDYO010000000
VERSION     DASDYO010000190.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2854)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2854)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2854
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.192"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            38..646
                     /locus_tag="U0290_002879"
     CDS             38..646
                     /locus_tag="U0290_002879"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003740585.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class I SAM-dependent methyltransferase"
                     /protein_id="HEM2302906.1"
                     /translation="MSFILYKPLINYLSEQAANPRGIIGEITTKIWSSYFEDLSKWTI
                     SNTELSNVTQVLDIGYGGGSNVKNLAELNKNWTIYGVDISEESYKTATNLNKKAINNG
                     KVELSVQDVASMNYQAGIFDVVYAIQTHMYWDNPKKGFEEIYRVMSQKGVLIVSSEKD
                     KIDYHMDEYKTTATLTVLLKEIGFREVVEKEKGNWVLYTIRK"
     gene            737..1309
                     /locus_tag="U0290_002880"
     CDS             737..1309
                     /locus_tag="U0290_002880"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302907.1"
                     /translation="MLKLYKKEQNQILYAKYWINNDKAIVHFGKIGKVGQKEETSNYL
                     EKYKSKAAFHEAFINRFVPQSYSENPPNENFWILIQYPLKSLTRTKRDIWLKDRVTDV
                     LNDDLGWKGLGIVDGFDIGQTANPNKQFALNIFCVVVDEEIGIKVIKSALRNNNCDYT
                     RVKIASRPFSDDAEYALNFSAKKKDVTFYV"
     gene            complement(1383..1454)
                     /locus_tag="U0290_002881"
     tRNA            complement(1383..1454)
                     /locus_tag="U0290_002881"
                     /product="tRNA-Arg"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(1419..1421),aa:Arg,seq:cct)
     gene            complement(1583..2575)
                     /locus_tag="U0290_002882"
     CDS             complement(1583..2575)
                     /locus_tag="U0290_002882"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465238.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="rod shape-determining protein"
                     /protein_id="HEM2302908.1"
                     /translation="MFGTTTIGIDLGTANILVYSKEKGIILNEPSVVALNTNDGTVLA
                     IGQEAKEMIGKTPTSISAVRPMKDGVIADFDLTSGLLREIMRRISVSGVRKPNVVVCT
                     PTGATSVERRAISDAVRSTGARSVVLIEEPVAAAIGADLPVAEPVANVIVDIGGGTSE
                     IAIISYGGVVSSTSIRTGGDHMDEEIIQYIRKNYNLLIGQTTAERIKMELGYAPIEHV
                     TQTADIRGRDLLTGLPKTIQVSSTEIQSALAETLQRILEAIRNTLELCPPELSGDIVD
                     RGIILSGGGSLLQGFRDWLVQEIDVPVHMAPSPLESVAIGTGRSLVFADKLAKN"
BASE COUNT          975 a          497 c          553 g          829 t
ORIGIN      
        1 gaaaataaca ctaatcattt tgggaggtat catcggtttg agttttattt tatataaacc
       61 attaattaac tatttaagcg aacaagcggc gaatccgcgt gggattattg gtgaaatcac
      121 tacgaaaata tggtcatcct attttgaaga tttgagtaag tggacaatta gtaatactga
      181 actaagcaat gttacacagg tattagatat tggttatggt gggggctcca atgttaaaaa
      241 cctagcggag ctaaataaaa attggactat ttacggagtg gatatttctg aagaatctta
      301 taaaacagcc acaaatttga ataaaaaagc aatcaataat ggcaaagtag agctatctgt
      361 acaagatgtt gcatcgatga attatcaagc aggtattttc gatgtagttt atgctataca
      421 aacccatatg tattgggata atcctaaaaa agggtttgaa gaaatctatc gagtaatgtc
      481 gcaaaaaggt gttttaatag tgtcgtctga aaaggataaa attgattatc atatggacga
      541 atataaaaca actgccacac taacagtact cttaaaagaa attggcttta gagaagtagt
      601 ggagaaagaa aagggaaatt gggttttgta tacaatcaga aaataattgc gagttatatt
      661 atcttttgaa atatctgtta caatgaataa aactctctaa tacagagtcc aattttatac
      721 atcatgaggt gaaaacatgt taaagctata caaaaaagaa caaaatcaaa tcttgtatgc
      781 taagtactgg ataaataatg ataaggcaat tgtgcacttc ggtaaaattg gtaaagtagg
      841 acagaaagaa gaaaccagca actatctgga aaaatacaag agcaaagctg cgttccatga
      901 ggcgtttatt aatcgatttg tcccacaaag ttatagcgaa aatcctccaa atgaaaattt
      961 ctggatatta attcaatatc cgctcaaaag tttaacaaga acaaaacgtg atatttggct
     1021 gaaagatcga gtaacagatg ttttaaatga cgatttgggg tggaaaggtt tagggattgt
     1081 agatggtttt gacataggtc aaaccgcgaa tcctaacaag caatttgctt taaatatatt
     1141 ttgtgtcgtt gttgatgaag aaataggtat taaagtgatt aaatcagctc taagaaataa
     1201 taattgtgat tatactagag taaaaattgc ttccagacca ttttcggatg atgctgaata
     1261 tgcgttgaat ttttcagcga agaaaaagga tgtaactttt tatgtatgaa taaagttttg
     1321 aaataagaac gataaaaaat ccgaaagtct tgatttatca agtgctttcg gatttttctg
     1381 agcgcccata cgcggaatcg aaccacgaac tagcccttag gaggggcttg ttatatccgt
     1441 ttaactatat gggcttatta taaaattatc tgactccaga aagccagaca ccagaaataa
     1501 gtttaccaga aataaggggt ttcagcaaga taaagaagca tctggctgca agggttacca
     1561 tgcgaccaga tgcttactgc aattaatttt tagctaattt atctgcaaaa acgagggatc
     1621 tacctgtgcc aattgcaacg gattccaaag gacttggagc catatgtaca gggacatcta
     1681 tttcttgtac aagccagtcg cggaaacctt gaagtaggga gccaccacca cttaaaataa
     1741 tgccgcgatc gacaatatca ccacttaatt ctggggggca aagttcaagc gtattccgaa
     1801 tagcttctaa tatacgttgt aatgtttcag ctaaagcgct ttggatttcc gtagagctta
     1861 cttggattgt ttttggtaag ccagtaagca aatcgcgacc acggatatcc gcagtttgtg
     1921 ttacgtgttc gatcggcgca taaccaagct ccattttaat tcgttctgct gttgtttgac
     1981 cgattaaaag gttgtaattt ttgcggatgt attgaatgat ttcttcatcc atatgatcgc
     2041 cacctgtgcg aatcgaagtg cttgaaacca caccgccgta tgaaataatc gcaatctcac
     2101 ttgtgccgcc accaatatct acaattacgt tagcgacagg ctcagcgaca ggtaaatcag
     2161 caccaattgc agctgcaaca ggttcttcaa ttaaaacgac tgaacgagca ccagttgatc
     2221 ttaccgcgtc tgaaatagcg cgacgctcga ctgacgttgc accagttggg gtacaaacga
     2281 ccacattggg ctttctcaca ccactaactg aaatccggcg cataatctcg cgcaaaagtc
     2341 cgctcgttaa atcaaaatca gcaataacac cgtccttcat tggtcttaca gcagaaatcg
     2401 aagtcggcgt tttaccaatc atctcttttg cttcctggcc aatcgcaagt accgttccat
     2461 cattcgtatt tagcgcgacc acagaaggtt cattcagtat aatgcctttt tctttactgt
     2521 aaactaaaat attcgcagta cctaaatcaa ttccaatagt tgttgttcca aacattctca
     2581 cacctaactt tctattaaaa atagcgagta aattctaggt gtacaactaa cagtatagac
     2641 ttttttcacc atataagcat tatttaaaca tggatgaaat gaaaaggtaa tttaaaatgg
     2701 cgatatgaca ggtattttcg gtgtttcgta aataaatcgt aaaaaaagta atcaaacaaa
     2761 aacgactatc cagagtagat agccgttttt tattaggaaa cttgccgctg tttttcaaat
     2821 tctgaataca tatagtaata aatgagcccg ctaa
//
LOCUS       DASDYO010000191         2831 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.193, whole genome shotgun sequence.
ACCESSION   DASDYO010000191 DASDYO010000000
VERSION     DASDYO010000191.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2831)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2831)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2831
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.193"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..571
                     /locus_tag="U0290_002883"
     CDS             <1..571
                     /locus_tag="U0290_002883"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2302909.1"
                     /translation="SNPSKLLILFDEIDAIALDRVNSNDLREMGRVTSTILKELDKLN
                     EEVVLIATTNLYEKFDRALIRRFDSVINFNRYEKEDLVEISEIILNSLLKKFKDAGRD
                     MKLFKKVIRNMDEIPNPGELKNLIRVSLAFSDPTNEFDYLRRLLRYVVEKPGNIELKE
                     LQNMGFTVREIEILTGISKSQVSRELKGD"
     gene            576..2807
                     /locus_tag="U0290_002884"
     CDS             576..2807
                     /locus_tag="U0290_002884"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_011701610.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="S8 family peptidase"
                     /protein_id="HEM2302910.1"
                     /translation="MNDILHLKGKFEQKERTNRPSGPKLPKNAIVSIKEVEELCDDLL
                     KMESFWSTQTIFSGGLVSVYYKKVAAKSNRISGFLSYKSNSSNDTIVGAKFTDGKKKK
                     HIITHYVSIEAIKESILKGKKAIEVLKSEFNGTISDEELNPKGKLDFIDFDYYGIAKT
                     NFQKIIVDSFYVEKFDTENSDFDSKKNSIVTIYDTGNDTQELFSRLGIKIFNDRIIND
                     TTILLDENYLEVLMQKAPYLISMATENLTELAPSDFIETFDGENNIIPSPNDEPTIGV
                     IDTLFDENVYFSDWVEFYNMIDTNIPTDNEDYRHGTAVSSLIVDGASINPSLDDGCGR
                     FKVRHFGVATRKAFNSFTIIRAIKEIVAKNKDIHVWNLSLGSNEEVNRNFISAEGAIL
                     DQIQFENDIIFVIAGTNKKSSETDKRIGAPADSINSMIVNSVGLNKEPANYSRQGIVL
                     SFFTKPDVSYYGGTAEDYMVVCEPLGKAYVTGTSYAAPWIARKLSYLIDIIGLSKEVA
                     KALLIDSAIGWKDNSKFDSLAIKGHGVVPIRIEDIINSPDDEIQFVVSGISEKYDTFN
                     YSFPVPVHNNKYPFVAKATLCYFPKCSRNQGVDYTNTELDIYFGRINDKDVLDSINKN
                     KQSIEEETHYLYEEDARKAFRKWDNIKHISEKFSPRSQGKKVYENRLWGMSIKTKERL
                     NASDGEGIRFGVVVTLKEINGVNRIDDFIQQCSLRGWLVNRINVENRIDIYQTANETI
                     DFE"
BASE COUNT         1088 a          329 c          552 g          862 t
ORIGIN      
        1 atcaaatcca tcaaaattat taatactttt cgatgaaata gatgctatag ccctagatag
       61 agtaaactct aatgacttaa gagaaatggg acgggtaaca tctacaatct tgaaagagtt
      121 ggataagtta aatgaagaag ttgttcttat tgccactact aatttgtatg aaaaatttga
      181 tagagcctta ataagaagat ttgattcagt aattaatttt aatagatatg aaaaggaaga
      241 tttagtagaa atttcagaaa tcatattgaa ttcattattg aaaaaattta aagatgctgg
      301 acgagatatg aagttattta aaaaagtaat cagaaacatg gatgaaattc cgaatcctgg
      361 agaattaaaa aatttgatta gggtatcatt agcttttagt gatccaacaa atgaatttga
      421 ttatctcagg agattgctga ggtatgtagt tgaaaaacct ggtaatatag aattgaaaga
      481 gttacaaaac atggggttta ctgttagaga gatagagata ttaactggta tatcaaaaag
      541 ccaagtctca agagagttga agggagattg aaaacatgaa tgatatttta catttgaaag
      601 gtaaattcga acaaaaagaa cgaacaaata gacctagtgg tcctaaatta cctaaaaatg
      661 caattgtttc tattaaggaa gtagaagaac tttgtgatga tttgttgaaa atggaaagtt
      721 tttggagtac gcaaactatt tttagtggcg ggttggtcag cgtatattat aaaaaggtag
      781 cagcaaagag taacagaatt agcggttttc tatcttataa aagtaattca tcaaatgata
      841 caattgtggg agcaaaattt acagatggaa aaaagaaaaa acatattatt actcactatg
      901 tttcaattga agcaattaaa gagtctattc tgaaggggaa aaaagcaatt gaagttctga
      961 agtcagagtt caatggcaca ataagtgatg aagaattgaa tccaaaaggc aagctagatt
     1021 ttattgattt tgattattat ggaattgcaa aaacaaattt ccagaaaatc attgtggact
     1081 cattttatgt agaaaaattt gatactgaaa atagtgattt tgattctaaa aaaaattcta
     1141 ttgtgacgat atatgatacg ggtaacgata cacaagaact ttttagtaga ctgggcataa
     1201 aaatatttaa tgatagaatt attaatgaca ctacaatttt attagatgaa aattacttag
     1261 aggttcttat gcaaaaagcg ccatatttga tatccatggc aacagagaat ttaaccgagt
     1321 tggctccgag tgattttata gaaacttttg atggtgaaaa taatataatt ccaagtccaa
     1381 atgatgagcc gactattgga gtaattgata ctttatttga tgaaaatgtt tattttagtg
     1441 actgggtaga attttataat atgattgata ctaatatacc aactgataat gaagattaca
     1501 gacatggtac agctgttagt tccttaattg tagatggagc aagtattaat ccctcgcttg
     1561 atgatggctg cggtagattt aaagtacggc attttggagt agctacaaga aaagccttta
     1621 attcttttac cattatccgc gcaattaagg aaatagtagc aaaaaataaa gatatccacg
     1681 tttggaacct gtcattggga tctaatgaag aggttaacag aaactttata tctgctgaag
     1741 gagcaattct tgatcagatt caatttgaaa atgatattat ttttgtaatt gctggaacca
     1801 ataaaaaaag tagcgaaact gataaacgga taggtgcacc agctgattca ataaattcaa
     1861 tgatagtaaa ttctgtagga ctaaataaag aacctgcaaa ttattctcga caaggaattg
     1921 tgttatcatt ttttacaaaa ccagatgtta gctactatgg aggaactgct gaggattata
     1981 tggtagtatg cgagccacta ggaaaagcat atgtaacagg gacatcatat gcagcgcctt
     2041 ggatagctag aaagttatct tatttgattg atattatcgg tctaagtaaa gaggtagcca
     2101 aagctctatt gattgattca gctattggct ggaaagacaa ctccaaattt gatagtttgg
     2161 caataaaagg acatggagtt gtgcctataa gaattgaaga tattataaat tcaccagatg
     2221 atgaaattca atttgtagta tcaggaattt cagaaaaata tgacaccttc aattatagct
     2281 tcccagtgcc agtgcataat aataaatatc cttttgttgc aaaagctaca ttatgttatt
     2341 tcccaaaatg ctctagaaac caaggtgttg attatacaaa tacagaattg gatatatact
     2401 ttggccgtat aaatgataaa gatgtattag atagtatcaa taaaaacaaa caaagtatag
     2461 aagaagaaac gcattattta tatgaagaag atgcaaggaa agcttttcga aaatgggata
     2521 atatcaaaca tattagtgaa aaattcagcc ctagatcaca agggaaaaaa gtctatgaaa
     2581 atagattatg gggtatgagt atcaaaacta aggaacggtt aaatgccagt gatggagaag
     2641 ggatacgctt tggtgtagtt gttacattga aggaaattaa tggtgttaat agaattgatg
     2701 attttattca acagtgtagc ctgcgtggat ggctagtgaa tagaattaat gttgaaaata
     2761 gaattgatat atatcaaact gctaatgaaa ctatagactt tgaatagaat aataaagtgg
     2821 tactgaaaat t
//
LOCUS       DASDYO010000192         2744 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.194, whole genome shotgun sequence.
ACCESSION   DASDYO010000192 DASDYO010000000
VERSION     DASDYO010000192.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2744)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2744)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2744
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.194"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            61..1821
                     /locus_tag="U0290_002885"
     CDS             61..1821
                     /locus_tag="U0290_002885"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464021.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="CocE/NonD family hydrolase"
                     /protein_id="HEM2302911.1"
                     /translation="MTAKITEKTLFSPSFEYVDNGIEHGVLSPFETKEIILEKGQQIA
                     EGFKPLDCSIKMLKDVPVKMRDGITIYTDIYLPITEEKVPTLIAWSPYGKSAGTAPRY
                     KNLFNMLGMGNAWNSGLTKFEAPDPAYWCAHGYAVCNPDMRGIAHSEGNTTMIGSQEA
                     EDGYDLIEWLAKQSWSNGKTALTGTSYLAFSQWYIAAEQPPHLTCINPTEGLADGYRD
                     LAFIGGIPDPNFIERLQINHVSAKNSQREDLTKEMEAYPLADSAIWKDKVADPSKITI
                     PAFVIASYSNTLHTMGTFRSWRSLGSKEKWLRIHDRQEWPYYYDENNVEELRRFFDYY
                     LLGKENNWTDTPTVRYALIDFQGGNQTDLPSEVFPPTNSENKRYYMNGLLRTLQETPT
                     SDDFKVSYTTENLPGRASFQMTFDKETHFVGYPKAKLFMEVDGYDDLDVFVWLQKLDK
                     FGNVLSEFVVPNHGAALQDFTQEGASALRYKGAWGRLRASMRQLDSQVSTDEIPAYSF
                     DKVEKLSSGEIVELDIILSPIGLTYKAGETLRVVVSSKDELGSVMPGTPGCTPNNKGM
                     HILHTSKEHPSYIQLPIINK"
     gene            1896..>2744
                     /locus_tag="U0290_002886"
     CDS             1896..>2744
                     /locus_tag="U0290_002886"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464020.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LysR family transcriptional regulator"
                     /protein_id="HEM2302912.1"
                     /translation="MKLSNLKYFVDVAMEGSFTRASEKLFISQPTLSRRIKELETELG
                     VELFIRNRHSLELSSAGQQFLIEVNDILNRVNKLSHMFDNQKTADEAGQLLKIGYLSN
                     FNMNAMYELLESFKQSHPHVQFSLKPDTPMNLAEGLSNGQYDLVFNLSAYFQPNMSIE
                     EVLFIKNHLQIAIPADHRFRKKKKVYFNDLKQEIVILLERKQSPIIVDYVVSQCTKHG
                     FNLKANSYVKDLDEGLAMTSVGEGLAFLYSGMNDGTLEDKYNIKIMDIQEERNDQNIV
                     AAINKQS"
BASE COUNT          946 a          474 c          518 g          806 t
ORIGIN      
        1 gatactacct atacttaaaa gtgttaaaac ttattaaaaa aataatcgga ggtaatttat
       61 atgactgcaa aaataacaga aaaaacgctt ttcagccctt cttttgaata cgtggataat
      121 ggcatcgagc atggagtgct aagtccattc gaaacaaaag aaatcatttt agaaaaagga
      181 caacaaattg ctgaaggttt caaaccactg gattgttcca ttaaaatgtt aaaagatgta
      241 ccagttaaga tgcgtgacgg tataaccatt tataccgata tttatttacc aataacagaa
      301 gaaaaagttc ctactcttat cgcctggagc ccttatggaa aaagtgctgg aacagctcct
      361 cgatacaaaa atctatttaa tatgctagga atggggaatg cctggaattc tggccttact
      421 aaatttgaag cacctgatcc agcatactgg tgcgcacatg gatacgctgt ctgtaatcct
      481 gacatgcgtg gcattgctca tagtgagggt aatactacaa tgattggctc tcaagaagct
      541 gaagatggct atgatttaat tgaatggtta gctaagcaat cttggagtaa tggaaaaaca
      601 gctctaacag gaacatctta tttagccttt tcccagtggt atattgcagc tgagcagccc
      661 cctcacctaa catgtatcaa tcctactgaa ggattagcag atggttatcg tgacttagct
      721 tttattggag gcattccaga tcctaatttt attgagcgtt tgcaaatcaa ccatgtcagt
      781 gctaaaaatt cgcaaagaga agatttaaca aaggaaatgg aagcatatcc tttagctgat
      841 agtgctattt ggaaagacaa agttgcagat ccaagtaaaa ttacaatacc agcttttgtt
      901 attgcaagtt attctaatac gcttcacaca atgggtacat ttcgttcttg gcgttcactt
      961 ggttctaaag aaaaatggct tcgtattcat gatcgccaag aatggccata ttactatgac
     1021 gaaaataacg tagaagaatt gcgacgcttt tttgattatt atttacttgg caaggaaaat
     1081 aattggacag atacaccaac tgtgcgctat gcattaattg actttcaagg tggcaatcaa
     1141 actgacttac catccgaagt ttttccacct accaatagtg aaaacaaacg ttattatatg
     1201 aatggcctat tacgtacttt acaagaaaca cctacttcag atgattttaa agtatcctat
     1261 actactgaaa acttgccagg gagagcatcg ttccaaatga cgtttgacaa agaaacgcat
     1321 tttgttggtt atccaaaagc aaaattattt atggaagtag atggatacga tgacttggat
     1381 gtttttgttt ggcttcaaaa gctagataaa ttcggcaacg tactaagtga atttgtcgtg
     1441 ccaaatcacg gggctgcact tcaggatttc acacaagaag gggcatctgc tttacgctat
     1501 aaaggcgctt ggggaagact tcgcgcatcc atgcgacaac tagattctca agtttcaaca
     1561 gatgaaattc ctgcttatag ctttgacaaa gtagaaaaac tctcttccgg agaaattgta
     1621 gaactagaca ttattttgag tcccattggt ctaacttata aagcaggtga aacactcaga
     1681 gtagtcgtga gtagcaaaga tgaacttggc tcagtaatgc caggaacgcc cggatgcaca
     1741 cctaataata aaggtatgca tatccttcat acgagtaaag agcacccatc ctatattcag
     1801 ctaccaataa tcaacaaata gaaaagcttg tcaatggagt ctaataactt tatactaaag
     1861 ctactattta caatctttca ttgaatggag caattatgaa gttatccaat ttgaaatact
     1921 ttgttgatgt ggctatggaa ggaagtttta cccgagcatc tgaaaaatta tttatttcac
     1981 agcctaccct tagtagacga ataaaagaat tagaaacaga attaggtgta gaactgttta
     2041 ttaggaatcg tcattcgctg gagttatcaa gtgcaggtca acaattttta atagaagtaa
     2101 atgatatttt aaatcgagtc aacaagctat cccatatgtt tgataatcaa aaaacagcag
     2161 atgaagctgg acaattatta aagattggtt atctctcgaa tttcaatatg aacgcaatgt
     2221 atgagctgct cgaatcattc aagcaaagtc atccacatgt tcaattctca ttaaaaccgg
     2281 atacaccaat gaatttagct gaaggtcttt ctaatgggca atatgattta gtttttaatt
     2341 tatccgctta tttccagccg aacatgtcta tagaagaagt attatttata aaaaatcatt
     2401 tgcaaattgc tatacccgcg gaccatcgat tccggaaaaa gaaaaaagta tattttaatg
     2461 atttgaagca agaaatagtt attttgctcg aaagaaaaca gtctcccatc attgtagact
     2521 atgttgttag tcaatgtact aaacatggtt ttaatttaaa agcgaattcg tatgtaaaag
     2581 atctggatga aggactagca atgacatctg ttggagaagg attagccttt ttgtattccg
     2641 gcatgaatga tggaacatta gaagataagt acaatattaa aattatggat attcaagaag
     2701 aacggaatga ccaaaatatt gtcgcagcca ttaataaaca gagc
//
LOCUS       DASDYO010000193         2699 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.195, whole genome shotgun sequence.
ACCESSION   DASDYO010000193 DASDYO010000000
VERSION     DASDYO010000193.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2699)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2699)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2699
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.195"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..2021)
                     /locus_tag="U0290_002887"
     CDS             complement(<1..2021)
                     /locus_tag="U0290_002887"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463989.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BspA family leucine-rich repeat surface protein"
                     /protein_id="HEM2302913.1"
                     /translation="MKKFSMRVVLIISVLFIAFGSANVSIAQERDTTNKLPEEELGSL
                     DTSNLIAEEVAQEKPAEVENLEEIPTTDELMQNPDVREQPVADSDDSDLTVVSSGAYW
                     TIYRNTANGEYSMRMFGNVPSSRPTAWNSYLKSIKHIEIEEATLTGSFASYFRNNVFT
                     VLESVRIERSNLSGVTSFEMAFYSPTLQKVIIRDNDYPTAPSLRTTEYMFGYTHKLTE
                     LDVSGLDTSAVTNMNCMFNYCSVLEELDVSNFDTSSVTTMRDMFGSSGKLEKLDVSNF
                     DTSSVTTMQAMFYGCTSLEELDVSNFDTNSVTNMSYMFYNCAGLEELDVSNFDTSSVT
                     NMYGTFVGCNSLEELDVSNFDTSSVTTMQAMFNACRALEKLDVSNFDTSSVTTMQAMF
                     ENCTGLGELDVSNFDTSSVTTMAYMFDGCTSLEELDLSNFDTSSVTTMAYMFQNCTAL
                     KSLYLDNFTTPKTMTGMFTGTTALTYLFASHNLRAFDGLANTRWYDEKNWVQFSNYKE
                     LQMYHEYQREPTGYRKGVFLSLTMDAMGGQFEDAEEQKVQNKVSGEYWEEVVPVKEGH
                     YFDGWYLDRNFTNKFDFSLPVAVSTTIYAKWVENYTVVIPASISLNEATELKVEGINR
                     GSKTLSVGLNYEETTISESNKLTLSNTADTTVQCLAPLSWDGSETNPKNA"
     gene            complement(2284..2661)
                     /locus_tag="U0290_002888"
     CDS             complement(2284..2661)
                     /locus_tag="U0290_002888"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302914.1"
                     /translation="MDSLKPFEERLASDYLIILDKRIDFSIHTLPIKVTILSTISNET
                     AVFDFMRYFSSYYNLEIINQVDPVVDLYISDFSVSPEVLTSLRINQPIIYVNTRWLES
                     DYVKINDNLAKIARKKFIANKKD"
BASE COUNT          838 a          577 c          425 g          859 t
ORIGIN      
        1 gcattttttg gattagtttc ggaaccgtcc caactcagtg gcgccaagca ttggactgtt
       61 gtgtctgccg tattggacaa ggttagcttg ttgctctcag aaatggttgt ttcctcataa
      121 ttcaagccta cggataaagt tttacttcct cgattaatcc cttctacttt caattcagta
      181 gcttcattta aggaaataga agctggaata accaccgtat aattttctac ccatttagcg
      241 tagatagttg tagatacagc aacaggcaaa gaaaaatcaa acttattagt gaagtttcga
      301 tcaagatacc acccatcaaa ataatgtcct tcttttacag gaaccacttc ttcccagtat
      361 tccccagaaa ctttattttg taccttttgt tcctccgcgt cttcaaactg cccacccatc
      421 gcatccatcg ttaaggaaag gaacacacct tttctgtagc cagtaggttc cctttggtat
      481 tcatgataca tctgtagttc cttgtaattc gaaaactgta cccaattctt ttcgtcatac
      541 catcttgtat ttgctaggcc atcaaaagct cttaaattgt gactggcaaa caagtaggtt
      601 aaggcggtgg ttccagtaaa catacctgtc atagtctttg gggtagtaaa attatccaga
      661 tataaagatt ttaacgctgt acaattttga aacatgtaag ccatagtagt tactgaactg
      721 gtatcaaaat tacttaaatc taattcttca aggctagtac atccatcaaa catgtaagcc
      781 atagtagtta ctgaactcgt atcaaagtta cttacatcaa gctctccaag gccagtacaa
      841 ttttcaaaca tggcctgcat agtagttact gaactcgtat caaaattgct tacatccagc
      901 ttctcaagtg ctctacaggc attaaacatg gcctgcatag tagttactga actcgtatca
      961 aagttactta catcaagctc ttcaagacta ttacagccaa caaacgtgcc atacatatta
     1021 gtaacggaac tggtatcaaa attacttaca tcaagctctt caagaccagc gcaattgtaa
     1081 aacatgtagc tcatgttagt cactgaattg gtatcaaaat tacttacatc aagctcttca
     1141 aggctagtac aaccataaaa catggcctgc atagtagtta ctgaactggt atcaaaattg
     1201 cttacatcca gcttctccaa ttttccacta ctaccaaaca tgtccctcat agtagtaacg
     1261 gaactggtat caaaattact tacatccagt tcctcaagta cgctacagta gttaaacata
     1321 caattcatat tagttacagc actcgtatca agaccactca catcaagctc cgtaagtttg
     1381 tgagtataac caaacatata ctccgtagtg cgtaaagatg gtgctgtcgg ataatcattg
     1441 tctctgatta tcactttttg aagtgttgga ctataaaatg ccatttcaaa agatgtcact
     1501 ccagacaagt ttgaacgttc aatcctcaca ctctcaagta ctgtgaaaac attatttcta
     1561 aaatacgatg caaaacttcc tgtcagcgta gcttcttcaa tctctatatg tttaatgctt
     1621 tttaaataac tattccaagc ggttggtcta ctgctcggca cgttgccaaa catacgcatg
     1681 ctatattcgc cgttcgcagt attacgataa atcgtccagt aagcacctga gcttaccact
     1741 gttaaatccg aatcatccga atcagcaaca ggctgctctc gaacatctgg attttgcatc
     1801 aactcatccg tagttgggat ttcttctaga ttctcgacct cggctggttt ctcttgcgca
     1861 acttcttctg caatgagatt agaggtatcc agagaaccca gctcctcttc tggaagctta
     1921 ttcgttgtat ccctttcttg tgcgatagaa acattagcgc tcccaaaagc aataaaaagc
     1981 acagaaataa taaggaccac tcgcatggaa aactttttca tcagctcccc tccttctttc
     2041 gtagttaatt tctagatgca aactttctag ctgcaactta attatagagg agtcgagaag
     2101 catttctggc cataaaattt taacttctta aaattttacg gcttagttgg tgtgtttact
     2161 ttttccatta gtattgtaca aatgaaaaat agaaataaaa aaatccgagt aacgatcatt
     2221 actcggacaa gaccttggtt ttccatttaa acattttcca tatccattcc aacaagtgtt
     2281 tccctaatct tttttattag cgataaattt ttttctcgct attttcgcca gattatcatt
     2341 aattttgaca taatcagatt ctagccatct agtatttaca tagattattg gttgattgat
     2401 acgtaaagag gtcaacactt cgggagatac ggaaaaatca cttatatata aatccaccac
     2461 cggatcaact tgattaatta tttccagatt gtagtaacta gaaaaatacc tcataaaatc
     2521 aaatacggct gtttcattag atatggtcga taaaatagtt actttaatag gcaaggtgtg
     2581 tatagaaaaa tcaatccgct tatccaaaat gatcagataa tctgaagcaa gtctttcttc
     2641 aaacggtttt aatgaatcca tttcttttaa atttactaat tgactaatca atggttcta
//
LOCUS       DASDYO010000194         2598 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.196, whole genome shotgun sequence.
ACCESSION   DASDYO010000194 DASDYO010000000
VERSION     DASDYO010000194.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2598)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2598)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2598
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.196"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(237..1685)
                     /locus_tag="U0290_002889"
     CDS             complement(237..1685)
                     /locus_tag="U0290_002889"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS transporter subunit EIIC"
                     /protein_id="HEM2302915.1"
                     /translation="MTKEAEIGKQIFIHVGGMENVSRIAHCMTRVRLGIVDSDLVNVA
                     GLKKVPGVIGVVEDDTLQIIVGPGVVNKVAGAMAEMAGVKIGETIQENLDSGTKTGKE
                     LVEEKASKTKAELKAKQNNSSGFKRLLKSISNIFVPLIPGFVGAGLIAGIAAIISNNI
                     TAGNLDAAVWTQYIDILGVINKGIFAFLAIYVGINTANEFGGTPVLGGGIAGITLLSG
                     LAEGHTITNIFTGDPIVAGQGGIIGVLLAVWLMCVLEKNLRKIIPNAIDIIFTPTLVL
                     LIIGLVTIFLIMPFAGLVSDGLVNGINWVIEVGGVFAGFVLGTLFLPMVMFGLHQVLT
                     PIHVEMIAQNGYTILLPILAMAGGGQVGAAIALWIRCRKNKPLVNMIKGGLPVGILGI
                     GEPLIYGVTIPLGKPFLTACLGGGIGGAVIGYFGNVGAIAIGPSGVALIPLIANNEWL
                     SYVIGLIAAYLGGFILTYFFGTPKDAMNSVEL"
     gene            complement(1698..2588)
                     /gene="murQ"
                     /locus_tag="U0290_002890"
     CDS             complement(1698..2588)
                     /gene="murQ"
                     /locus_tag="U0290_002890"
                     /EC_number="4.2.1.126"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727333.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramic acid 6-phosphate etherase"
                     /protein_id="HEM2302916.1"
                     /translation="MLENLATEERNEKTIDLDTLSPKEILAVMNEEDLTVPIAIKKVL
                     PQIELIVSGVISCFQKGGRLIYLGAGTSGRLGVLDAAECVPTFGVSKEQVIGLIAGGE
                     KAFVAAIEGAEDSKILGENDLKQIKLTANDFVIGIAASGRTPYVIGALDYAKSVGAKT
                     GAISCNANAKISAHADIAVEVVTGAEILTGSTRLKAGTAQKLVLNMISTASMVGIGKV
                     YKNLMVDVLPTNKKLEERSKRIIMEATEADYETANKFYEAAEKHVKVAIVMILTNSTK
                     EIALEKLSEAKGFVRNTIQK"
BASE COUNT          781 a          574 c          383 g          860 t
ORIGIN      
        1 aaccaaatat tgaaattcat caaaaaaact ttttatgttt tgtactgttt taatgtaatc
       61 tatattgttt ttcgtcgttg acaccccgtt ttactttaat actatcaaaa cggattcatt
      121 atttgttatg ctaactgcgt aaaaaagctt cgaaattagt aataaaacta atttcgaagc
      181 ttctctaatc aattcacttc aatgtgtaca aatttccgtg gaacagcaat tacttcttac
      241 aattctacgc tattcattgc gtcttttggt gtaccaaaga aataagttaa aatgaatcca
      301 cctaaatatg ctgcaattaa tccgatgacg taagaaagcc attcattatt cgcgattagt
      361 gggataagtg caactcctga tgggccgatt gcaattgctc cgacgttacc aaagtagccg
      421 attactgccc caccgatacc gcctccgaga caagctgtaa gaaaaggttt cccaagtggt
      481 attgttaccc cataaattaa tggttcaccg atacctaaaa ttccaaccgg tagaccccct
      541 ttaatcatat ttacaagtgg tttattttta cgacaacgaa tccaaagcgc gattgctgca
      601 ccaacttgtc cgccacctgc catagctaga ataggaagta agatagtata accattttga
      661 gcaatcattt ctacatggat gggtgttaaa acttgatgta acccaaacat aaccattggt
      721 aagaataacg tccctagcac aaaacctgcg aatactcctc caacttcgat tacccaatta
      781 ataccgttaa ctaaaccatc tgatacaagt cctgcaaaag gcataattaa gaaaatagtt
      841 actaaaccaa taataagtaa tacaagcgtt ggcgtaaaaa taatatctat cgcattcgga
      901 atgattttgc gcaagttttt ttcaagtacg cacattaacc aaactgctaa taatacgccg
      961 ataatgccac cctgtccggc tacgatagga tcccccgtga aaatgtttgt aattgtatgt
     1021 ccttctgcta atccggaaag caatgttatc ccagcgattc caccaccgag tacaggtgtt
     1081 ccaccaaatt cattcgcggt attaatccct acataaatag ctaagaaggc aaatattcct
     1141 ttattaataa ctcctaaaat atcaatatat tgagtccaaa cagcagcatc taaatttcca
     1201 gctgttatat tattagaaat aattgctgca ataccagcaa ttaatcccgc tccaacaaaa
     1261 cccggaatta gtggaacaaa aatattagag attgatttta gtaatctttt aaaaccagat
     1321 gaattatttt gttttgcttt taattcagct tttgttttgg atgctttttc ttcgactaat
     1381 tccttaccag tttttgtgcc gctatccaaa ttttcttgaa tcgtttcgcc aattttaaca
     1441 ccagccattt ctgccattgc gccggccact ttgttcacaa ctcctggtcc aacaataatc
     1501 tgtaaagtat catcttctac aacaccgata acacccggaa ctttttttaa tccagctaca
     1561 ttaacaaggt cactatcaac tatccccaat cgaactcgtg tcatacaatg tgcaattctt
     1621 gaaacgtttt ccattccacc gacatgaata aatatttgtt ttccaatttc tgcttctttt
     1681 gtcattattc cagctcctta tttttgaatg gtgtttcgaa caaacccttt tgcttcactt
     1741 aatttttcta acgctatttc tttggttgaa ttggttaaga tcatgacaat ggcaactttg
     1801 acatgttttt cagctgcttc ataaaattta tttgctgttt cgtaatcagc ctctgtagct
     1861 tccataataa ttcgtttaga gcgctcttct aattttttat ttgttggtaa aacgtccacc
     1921 atcaaatttt tatacacttt tccaattcca accattgaag ctgttgaaat catatttaat
     1981 actagtttct gagctgttcc tgcttttaac ctagtagaac ctgttaaaat ttccgctccg
     2041 gtcacaactt ctacggctat atcggcgtgc gctgaaattt ttgcattagc attacaagaa
     2101 attgctccgg ttttagcccc gacagatttg gcgtaatcaa gtgcgccaat tacataaggc
     2161 gttctaccac ttgcagcaat accaataaca aaatcgtttg cagttaactt aatttgcttt
     2221 aagtcgtttt cgccaagtat ttttgaatct tccgcacctt ctattgcagc tacaaaagct
     2281 ttttcaccac ctgcgattaa gccaatgacc tgctcctttg agaccccgaa agttggaaca
     2341 cattcagctg catcaagtac tcctaatctt ccacttgttc cggcaccaag ataaatcaaa
     2401 cggccacctt tttgaaagca cgagatgaca ccgcttacaa ttaactcgat ttgaggtaag
     2461 acctttttta tagctattgg aactgttaaa tcttcttcat tcattactgc taaaatttct
     2521 tttggagaaa gtgtgtctaa gtcaatcgtt ttttcatttc gttcttctgt tgctaaattc
     2581 tctaacattt taaccact
//
LOCUS       DASDYO010000195         2529 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.197, whole genome shotgun sequence.
ACCESSION   DASDYO010000195 DASDYO010000000
VERSION     DASDYO010000195.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2529)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2529)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2529
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.197"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..366
                     /locus_tag="U0290_002891"
     CDS             <1..366
                     /locus_tag="U0290_002891"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM2302917.1"
                     /translation="DNNLRKQEMIQKEIISLQRKREKFQKAWAADLMNDDEFSKLMID
                     TKMEIDAAEDRKKEYDVSLFVSPEDIAKRNNILRELKINWTSLSPTEKTDFISMFIEG
                     IEYVKDDENKAVITKISFL"
     gene            complement(413..532)
                     /locus_tag="U0290_002892"
                     /pseudo
     CDS             complement(413..532)
                     /locus_tag="U0290_002892"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464788.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="XRE family transcriptional regulator"
     gene            683..1078
                     /locus_tag="U0290_002893"
     CDS             683..1078
                     /locus_tag="U0290_002893"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464787.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302918.1"
                     /translation="MPNLSNRLTLLREKQGWSKAETARRLGLKAPSTYGNWEYGIREP
                     DLEMVTQIATLYDVSVDYLLGQQSIPTYAPSELQNEKDIGKRITKISEDLKYEDDLNL
                     DGQPLNESAAAFLADSINFLYEQAKKIND"
     gene            1158..2297
                     /locus_tag="U0290_002894"
     CDS             1158..2297
                     /locus_tag="U0290_002894"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464786.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PrsW family intramembrane metalloprotease"
                     /protein_id="HEM2302919.1"
                     /translation="MSEWYFKKNEQKMGPFTNVEMIALYRKKEINNLTLVQKSPHPEW
                     IAFKQTELYQHIGNHGNSELKISNLFSAVFKKHSKEEGEKVFIAGTKYTTPAISDIPH
                     SWPHPWVFSRVFLVLIVTYFLLLACTYLFDNSNTIPGLMVIGSFAVPFSVLLFFFETN
                     APRNISVFDVVRMFFIGGVAALVATLVIYSIIPVGKLNYFNALLVGFIEETGKMIIVA
                     LFIRSLNSKYILNGLLIGAAVGAGFAAFESLGYAFNYSVDAAFLFKDIHIAGETMLNV
                     IFSRGWQSIGGHVAWAAITGAALVIAKGDQKLGMHHIFTGTFWKWFIIPIALHFIWDC
                     PFNPLPAIAFKQIVLIIVVWFVILRLISKGLKQVSVISAASKAAK"
     gene            2444..>2529
                     /locus_tag="U0290_002895"
     CDS             2444..>2529
                     /locus_tag="U0290_002895"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464785.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glutamate 5-kinase"
                     /protein_id="HEM2302920.1"
                     /translation="MRESLKNSKRLVIKVGTSTLMYGNGHIN"
BASE COUNT          837 a          387 c          463 g          842 t
ORIGIN      
        1 gataataatt tgagaaagca agaaatgatt caaaaagaaa ttatttcact tcaaagaaaa
       61 cgtgaaaagt ttcagaaagc atgggctgct gacctcatga atgatgatga attttctaaa
      121 ttaatgattg atacaaaaat ggagattgat gctgcagaag atagaaaaaa agaatatgac
      181 gtatcattat ttgtatctcc tgaagatatt gctaaaagaa ataacattct tcgtgaacta
      241 aaaataaatt ggacttcatt atctcctact gaaaaaacag attttataag tatgtttatt
      301 gaaggaattg aatatgtaaa agatgatgaa aataaagcgg ttataacgaa aataagtttt
      361 ttataaataa ttgtcagtca atcaaaagaa ttatttatag gttttttgtc aaatacggtg
      421 atgtgtacct atagcccatc cgtcgcgcaa tgaaagcttg ggtgattcct cgctgcaacc
      481 gtaattctcg aatttttgtt gtattaattc ttctggtgtc tactgttttc atgtcatctt
      541 ctccttatct acacaatttg agttgttaat acaattctaa caacacaata cgactatgtc
      601 aatcagaaaa taatacgtta tgtgttaaaa tgtagctaaa ctgagtaaga tattgtataa
      661 tcaaacaaaa aggagtgaaa ttatgccaaa tttaagtaac agacttactt tattacggga
      721 aaaacaaggt tggtcaaaag cagaaacagc tagaaggctt ggtttaaaag caccttccac
      781 ttatggcaat tgggaatatg gtattcggga accagattta gaaatggtga ctcaaattgc
      841 aacactttat gatgttagtg tcgattattt acttggccaa caaagcatcc caacctatgc
      901 tcctagtgaa ctccaaaatg agaaagatat tgggaaaaga ataactaaaa ttagtgaaga
      961 tttaaaatat gaggatgatt taaatttaga tggacaaccg ctaaatgagt ccgcagcagc
     1021 ttttttagct gattcgatta attttcttta tgaacaagcg aagaaaataa acgattagtt
     1081 cctttgctcg tttaactttt agcgtttttg ggaataatta atagagtcaa aataaaaagc
     1141 taaaggggga gtttcatttg tcagaatggt acttcaaaaa gaacgaacag aaaatggggc
     1201 cttttacaaa tgtagagatg attgctctat atagaaagaa agagattaat aatcttacat
     1261 tggtccaaaa atcccctcat ccagagtgga ttgcatttaa gcaaacagaa ttatatcaac
     1321 atattggaaa ccacgggaat tcagaattaa aaattagcaa ccttttctct gctgttttca
     1381 aaaagcactc taaagaagaa ggcgaaaaag tctttattgc tggtactaag tatactactc
     1441 cagcaataag tgatatccct cattcttggc cacatccttg ggtattctcc cgagttttct
     1501 tagtgttaat cgtcacgtat tttttacttc tagcatgtac atatttgttt gataacagta
     1561 atacaatacc gggccttatg gtaattggtt catttgcagt tccgttttct gttttattat
     1621 tctttttcga aacgaatgca cctcgtaaca tcagcgtttt tgatgtagtg cgaatgttct
     1681 ttatcggtgg tgtagcagcg cttgttgcaa cacttgttat ttactccatt attccagttg
     1741 gaaaattaaa ttattttaat gcacttttgg ttggttttat tgaagaaact gggaaaatga
     1801 ttattgttgc tctcttcatt cgttcattaa actcgaagta cattttaaat ggtttactta
     1861 tcggtgccgc tgttggggct ggatttgctg catttgaatc acttgggtac gcgtttaact
     1921 atagtgtgga tgctgccttt ttattcaaag atattcatat tgccggtgaa acgatgctca
     1981 atgttatctt tagccgtggt tggcagtcta tcggcggcca tgttgcctgg gctgctatta
     2041 ctggtgccgc acttgttatc gctaaaggtg atcaaaaact tggaatgcac cacattttca
     2101 caggaacttt ctggaaatgg tttattattc cgattgcttt acatttcatt tgggattgcc
     2161 cgttcaatcc gcttccagca attgcattca aacaaattgt tttaatcatt gttgtttggt
     2221 tcgttatctt acgacttatt agtaaaggtt tgaaacaagt ttcagtcatt tctgccgcga
     2281 gtaaagcagc taaataaaaa ataagtccta agaaaatttc ttaggactta tttttatact
     2341 caaaattaaa aatctgaagc tcataaactt gattctaata tggacatatc tgcattttca
     2401 tgtaaaatag aagtattatc ttattagcag aggggtcata gaaatgcgcg aatctttaaa
     2461 aaatagtaag agattagtca tcaaagttgg tacaagtaca ttaatgtatg gaaatggcca
     2521 tattaattt
//
LOCUS       DASDYO010000196         2423 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.198, whole genome shotgun sequence.
ACCESSION   DASDYO010000196 DASDYO010000000
VERSION     DASDYO010000196.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2423
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.198"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(427..771)
                     /locus_tag="U0290_002896"
     CDS             complement(427..771)
                     /locus_tag="U0290_002896"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764803.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302921.1"
                     /translation="MQLSKAEVLASKVSDEIEERLGDKISSSFSIYKTQDEPWIEFSI
                     EFSAYNFFNIILNYDRGSFGCSIVNGGLGIAQTNTQKWYDKADMDIFCKELQEQLELR
                     IPDKFLVYNGWK"
     gene            complement(912..1187)
                     /locus_tag="U0290_002897"
     CDS             complement(912..1187)
                     /locus_tag="U0290_002897"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724906.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302922.1"
                     /translation="MEIVIQRAQNVLKLIDEEFPNQKLYNGIIRDIYVLTEKILKSAE
                     GNCLITEKIDLNSLGRQFVDNGGSYNSPVILEFEKLVNQLKNTEVFK"
     gene            complement(1559..1939)
                     /locus_tag="U0290_002898"
     CDS             complement(1559..1939)
                     /locus_tag="U0290_002898"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003764798.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302923.1"
                     /translation="MIKSGEYTCINGKEYKVILKDKNGKSYIISDKKESDFQKYADGI
                     YEKEIDLEQLENLYYIIPKAVYEGNNFMIRPNMKNEGICLGTNDSELAKELKFERTDK
                     YLYEKWVPESEIEIMEERKNIPLN"
     gene            complement(2345..>2423)
                     /locus_tag="U0290_002899"
     CDS             complement(2345..>2423)
                     /locus_tag="U0290_002899"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724903.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302924.1"
                     /translation="SRVLSNRRRVKDGELPEYSCPLWDN"
BASE COUNT          717 a          480 c          264 g          962 t
ORIGIN      
        1 tggcatcttt cttgtaattt tctatctcga acaagttaga atccagaaat cttgacagac
       61 agttctttgc atctatctcg ttaaaaatag tattcttaag ttccggtcta ggacaaagcg
      121 tcttaaatcg gctcatttta atcattattc caaaataaaa gatggctatt tctttatcat
      181 gtaatgtcat aatttttgtt ttagtacctc tagacaattt aaatagctcg tattttaatt
      241 cattgcaggc taaaacaaag ataatatctt gatttacgat accttctaat cgttctctta
      301 cctctatact attcgtggac ttattgtctg ttataaaata gcctgtactt aaaaaattcg
      361 ttaaggattc tatcataagt ataaatacca cctacattgt agctttcatc aaattaacaa
      421 gtctatttat ttccaaccgt tgtacactaa aaatttatct ggaattctta attcaagctg
      481 ttcctgtagt tctttgcaaa aaatatccat gtctgctttg tcataccatt tttgggtatt
      541 agtttgagca atacctaacc ccccatttac aatactacat ccaaaggaac cgcgatcata
      601 attcaatatg atattaaaaa aattatatgc cgaaaattct atactaaact ctatccatgg
      661 ctcatcttgt gttttataaa ttgaaaaaga agaactaatt ttatcaccca atctttcttc
      721 tatttcatca ctaacttttg aagctaatac ttctgcttta cttaattgca tataacacag
      781 ctcctttttt aaatctcttt aattatattt accaatcttg atttctcttt ttctttacta
      841 attcagtaat actctctaaa tccttatatg taaatgtatt gtccactctc actatgctac
      901 ttatcttgtt gttatttaaa aacttctgta ttttttagtt gatttacaag tttctcaaat
      961 tctaatatta ctggactgtt ataagaacca ccattatcta caaactgtct gcccagacta
     1021 ttcaaatcta ttttttctgt gattaggcag tttccctcag cagatttaag tatcttttct
     1081 gttaatacat aaatatctct tattatccca ttatataatt tttggttagg aaactcttca
     1141 tcaattaatt ttaaaacatt ttgtgcgcgt tgtattacta tctccaacta tacccctcct
     1201 tttaatattg tatctgtcga ctcgattact tgaggtgcaa ttttccccaa tattaatttg
     1261 ctggccttta ggaataatta tttctgcttc gtacatgcga gtattcttcc atccaggtaa
     1321 taatgccata tctatttttg cgtctattcg acttattgtc ttctctgaag tcacaaaact
     1381 tcctgtagac tttgcatttc caccaaatac tctctataca ccgttatttc ctcagtagtt
     1441 tttactgtac gataatttcc atctaagaag gaatctatta ctccctgagg tagaatttct
     1501 ctatccattt caataacttt atcatctatt ttagttctat atttagccac tcattaagtt
     1561 aatttaaagg tatatttttt cgttcctcca tgatttctat ctcagactca ggtacccatt
     1621 tctcatataa atatttatct gttctttcaa attttaattc ttttgctaac tcagaatcat
     1681 ttgttcccaa acaaattccc tcatttttca tattaggtct tatcataaaa ttgtttcctt
     1741 cgtacaccgc tttcggaatt atataataca gattttctaa ttgttctaaa tcaatttctt
     1801 tttcatagat accgtcagca tacttttgga aatcagactc ttttttatca cttattatat
     1861 aactttttcc atttttatct tttaaaatca ctttatattc tttcccgttt atacaagtat
     1921 attctcctga ttttatcatt atgttcacta cttctttcta agttaaagtt caagagctat
     1981 aaatccgcca atgtttcaac tccatctaat actccataaa gattagctcc atcaattttt
     2041 ttgatgccgt aaagacattt aatgtacaca gagacccgtc cgtatttatt cctcgaacag
     2101 caatagaaat taggctattt gcatcattta taatagaaaa ctctgtttca attttattgt
     2161 atatgctggt attgttcact atctttactc ctttatggct ttggaagaaa attccccata
     2221 tcaatagcgt atgctcaaaa atacacaagt gaaatgagga aaataacata aggatattca
     2281 ccagtccttg ggtcatttct atcaatataa ctctccatat ccacttaaga tattttttct
     2341 actcttaatt atcccataat ggacaggagt attctggcag ttccccgtct ttcactcttc
     2401 gacgattcga taaaacccta ctc
//
LOCUS       DASDYO010000197         2418 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.199, whole genome shotgun sequence.
ACCESSION   DASDYO010000197 DASDYO010000000
VERSION     DASDYO010000197.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2418)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2418)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2418
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.199"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            126..>2418
                     /locus_tag="U0290_002900"
     CDS             126..>2418
                     /locus_tag="U0290_002900"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_192934710.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2302925.1"
                     /translation="MKKLVKSAVVFASLVFIGTSATMITEKASAASIDPVQKADGQAT
                     YIPKGVRDGTATEEHDGFEDGTNSVLQQVPLLRATTGYPDVNAYIKSNKFSTAKIEKQ
                     LKSQFPKFNYRNGYGKPEGIVIHETANNSSTITGEINYMSTNYNNAFVHAFVDKSRII
                     QIHPTENGVWGAGQYANARFIQVELVRSKTFDEFARSINNYAYYAAYLLDQYNLPVDS
                     AHSDGKGTVWSHDAVTRYLGGTTHTDPVSYFNQWGYNFNSFVTLINEKYKAIQASKVT
                     YDKIEYDKGVTAYARVKTAPGNAVWTKPYRTEGSKLVNQLSVYQGKNMRILREAKTPI
                     TTWYQFSIDGKVIGWVDTRALDTFYKQSMEQPANLTRYVASNKTGEAYYKVPVVDADV
                     KWGTLAAYKDQKLTVDKQATVEGQLWYRVRTSTTFIGWTKASNLTATSPFDKIEYDKG
                     VTAYARVKTAPGNAVWTKPYRTEGSKLVNQLSVYQGKNMRILREAKTVITTWYQFSID
                     GKVIGWVDTRALDTFYKQSMEKDTNLTRYVIANKVNEAYYKVPVVDADVRWGTLAAYK
                     DQKLTVDKQATVEGQLWYRVRTSTTFIGWTKASNLTTTTPYDKIEYDKGATAYARVKT
                     APGNAVWTKPYRTEGSKLVNQLSVYQGKNMRILREAKTVITTWYQFSIDGKVIGWVDT
                     RALDTFYKQSMEKDTNLTRYVIANKVNEAYYKVPVVDADVRWGTLAAYKGQKLTVDKQ
                     ATVEGQLWYRIRTSSTFIGWTKAS"
BASE COUNT          817 a          469 c          491 g          641 t
ORIGIN      
        1 aacatacgta aataggttca ttgttaccaa tatccattga ctacaaccag gcgtgttgtc
       61 ataattagaa atagaatact tttatttaat ataaaaagta gtgcagttag gagaggattt
      121 aaactttgaa aaaattagta aaatcggcgg ttgtttttgc aagccttgtt tttattggca
      181 cctccgctac tatgattaca gaaaaagcaa gtgctgcttc cattgatccg gtgcaaaaag
      241 cagatggtca agctacttat atccccaaag gagttagaga tgggactgca acggaagaac
      301 atgacggctt tgaagatgga actaatagcg tactacagca agtccctttg cttcgcgcaa
      361 caacaggata ccctgatgtt aatgcctata ttaaatcaaa caaattttca acagcaaaaa
      421 tagaaaaaca attaaaaagc caatttccta aattcaacta tcgtaatggt tacggcaaac
      481 cagaaggaat agttattcat gaaacagcaa ataattcatc tactattaca ggtgaaatca
      541 attatatgag taccaactac aacaatgcct ttgttcacgc ttttgtagac aagtctcgta
      601 taatccaaat ccatcctact gaaaatggtg tttggggagc aggacaatat gctaatgctc
      661 gttttatcca agttgaatta gttcgttcga agacattcga tgaatttgct cgttctatta
      721 ataactatgc ctattatgct gcgtaccttt tagatcaata taaccttcct gttgatagcg
      781 cgcacagtga cggcaaagga acagtctggt cccacgatgc agttacacgt tatttaggcg
      841 gaacaaccca tactgatcct gtttcttatt tcaaccaatg gggttataat ttcaatagtt
      901 ttgttacatt gattaatgaa aagtacaaag cgattcaagc tagcaaagtt acttacgaca
      961 aaatcgaata cgataaaggc gtcacagcct acgctagagt taaaactgca cctggtaatg
     1021 cagtttggac aaaaccttac agaacagaag gctcgaaact agttaatcaa ctttctgtct
     1081 accaaggtaa aaacatgcgg atcttgcgtg aagctaaaac accaattact acttggtatc
     1141 aattcagcat tgacgggaaa gtaatcggtt gggttgatac tcgtgcactc gatacgttct
     1201 acaaacaaag catggaacaa ccagctaatt taactcgcta tgtcgcttcc aacaaaactg
     1261 gtgaggccta ctacaaagta cctgttgttg atgcggatgt caaatggggc actttagctg
     1321 cttataaaga tcaaaaacta accgtggata aacaagcaac ggtggaaggg caactttggt
     1381 atcgcgttag aacaagcact acctttattg gttggacgaa agcttccaac ttaacagcta
     1441 cctctccatt tgataagatt gaatacgata aaggtgtcac agcctatgct agagttaaaa
     1501 ctgcacctgg taatgccgtt tggacaaaac cttacagaac ggaaggctct aaacttgtca
     1561 atcaactttc ggtctaccaa ggcaaaaaca tgcggatctt gcgcgaagct aaaacagtaa
     1621 ttactacctg gtatcaattt agtattgatg ggaaagtaat cggttgggtt gatactcgtg
     1681 cactcgatac gttctataag caaagcatgg agaaagatac taatttaact cgctatgtga
     1741 ttgcgaacaa agtaaacgaa gcgtactaca aagtgcctgt tgtggatgcg gatgttagat
     1801 ggggcacttt agctgcttat aaagatcaaa aactaaccgt ggataaacaa gcaacggtcg
     1861 aaggacagct ttggtaccgc gttagaacaa gcactacttt tatcggttgg acaaaagctt
     1921 cgaacttaac aacaactacg ccatacgata aaattgaata tgataaaggc gccacagcct
     1981 atgctagagt aaaaactgcg ccaggcaatg ccgtttggac aaaaccttac agaacggaag
     2041 gctctaaact tgttaatcaa ctttcggtct accaaggtaa aaacatgcga atcttgcgcg
     2101 aagctaaaac agtaattact acctggtatc aattcagcat tgacgggaaa gtaatcggtt
     2161 gggttgatac tcgtgcactc gatacgttct ataagcaaag catggagaaa gatactaatt
     2221 taactcgcta tgtgattgcg aacaaagtaa acgaagcgta ctacaaagtt cctgttgtag
     2281 atgcggatgt tagatggggc actttagctg cttacaaagg tcaaaaacta accgtggata
     2341 aacaagcaac ggtcgaaggg caactttggt atcgaataag aacaagctcc acctttattg
     2401 gttggacaaa agcttcga
//
LOCUS       DASDYO010000198         2408 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.200, whole genome shotgun sequence.
ACCESSION   DASDYO010000198 DASDYO010000000
VERSION     DASDYO010000198.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2408)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2408)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2408
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.200"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(41..112)
                     /locus_tag="U0290_002901"
     tRNA            complement(41..112)
                     /locus_tag="U0290_002901"
                     /product="tRNA-Glu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:complement(77..79),aa:Glu,seq:ttc)
     gene            complement(310..1023)
                     /locus_tag="U0290_002902"
     CDS             complement(310..1023)
                     /locus_tag="U0290_002902"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GntR family transcriptional regulator"
                     /protein_id="HEM2302926.1"
                     /translation="MVKYELIAADIREKINNGTYPPESILPDQVSLCKAYDCSRMTIK
                     KAFDVLALEGLVYRQRGAGTFVMKNALANKQDASLRDYDGLTKMMGDNRISSKIIAFD
                     IAFPDEKTQEQLLIKADQPVYKLIRLRLLDGAPYVLEHTTMPADLVPGLTKEILHHSI
                     YAYLQDSLGLVLSGAFRKINADKPSEYDQEYLACGEHDPVLEVEQVVYLKDGRPVEYS
                     RSRHRYDTRSFIMVDHREK"
     gene            complement(1104..2390)
                     /gene="celB"
                     /locus_tag="U0290_002903"
     CDS             complement(1104..2390)
                     /gene="celB"
                     /locus_tag="U0290_002903"
                     /EC_number="2.7.1.205"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464427.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PTS cellobiose transporter subunit IIC"
                     /protein_id="HEM2302927.1"
                     /translation="MNKFMELLGEKLMPLAAKLGENRYLTTLRDAFMLAFPLTMFGSI
                     AVVLMNLPFWSDETKAVLQLYLGNAQSATMSIMTVFVVFGIGYSLSKYYKVEAIYGGA
                     VALASFLILTPFFFNSPDGELITGALSLDRLGAKGMFIGMITGFIAAELYRFFVQRDW
                     TIKMPAGVPPAVAKSFAALIPAILTLSIFLAINVMVQFFFHTNLHDVVYTVIQKPLVG
                     LGSGIVPTLIALFFVQVLWFFGLHGQIIVNSVMDPIWNTLMLENLDAYKAGLPLPHII
                     TKPFMEVFTVGMGGSGMTLAVVIALAFLMKSKQSKEIGRLALGPGIFNVNEPVLFGMP
                     IVLNATILIPWIIAPLIVTTLNYFVMAAGIVPAPTGVAVPWTVPIVINGILATNSWLG
                     GALQVVDFFIVLIIWYPFLKLVDRTNIARESEAAIK"
BASE COUNT          777 a          522 c          402 g          707 t
ORIGIN      
        1 tacaccacgg aaccatatgt ataaaaaatg aataaaaaag tgacccgtac gggattcgaa
       61 cccgtgttac cgccgtgaaa gggcggtgtc ttaaccgctt gaccaacggg ccagataaaa
      121 aacgaaaaat gaatatatat tcaattgaat tcatttctct tacaccagct tttttattat
      181 aacataatct gagtgactgt caacggcttt ttctaatttt atttacattt ttttcatcgg
      241 aagtttttta tacattttta cctccataaa acaaagtcag ctatgcttta cgggcatgct
      301 gactttattt tacttttctc ggtggtcaac cataataaaa cttctcgtat catagcgatg
      361 tcttgatcta gaatattcca ctggtctacc atctttcaaa tacactactt gctccacttc
      421 taaaactggg tcgtgttccc cgcacgctaa atattcttga tcatattcag atggcttatc
      481 ggcattaatt ttccgaaagg caccgcttag cacgagtcca agtgaatctt gtaagtatgc
      541 ataaatcgaa tgatgcaaaa tttctttcgt taaaccagga actaaatctg ccggcatcgt
      601 tgtatgctct aacacatatg gtgcgccgtc caagagccgt aaccgaatca acttgtacac
      661 tggctggtct gcttttatta aaagttgttc ttgtgttttt tcatctggga aagcaatatc
      721 gaatgcaata attttactcg agattcggtt gtctcccatc atttttgtca aaccgtcata
      781 atcccgcaaa ctcgcatctt gcttattagc taaggcattt ttcatgacaa aagtccccgc
      841 accccgttgt ctgtaaacaa gtccttcaag cgctaaaacg tcaaaggctt tttttattgt
      901 cattctgcta caatcataag ctttacacaa gctcacttga tcaggaagaa tggattctgg
      961 tggataagta ccgttgttta ttttttcgcg gatatctgct gcaatcaatt catacttaac
     1021 caattcgatc gctccttcgc ttgaattaaa aatgtctagc catttctagt caaattatag
     1081 catatcgaaa aggaaaattt aacttatttg atagctgcct ctgattctct cgcaatattt
     1141 gtccgatcga ctagttttaa gaacggatac cagataatga ggacgatgaa gaaatcgact
     1201 acttggagcg ccccgcctag ccatgagtta gttgcaagaa taccattgat gacaattggc
     1261 accgtccaag gaacagcaac cccggttgga gcaggaacaa taccagctgc catgacgaaa
     1321 taattcaaag tagttacaat caaaggcgca ataatccatg gaattaaaat cgttgcattt
     1381 aatacaattg gcataccaaa aagtaccggt tcattaacgt taaaaattcc tggcccaagt
     1441 gctaatcgac caatttcttt actttgctta ctcttcatta agaatgctag tgcaataacg
     1501 actgctaaag tcattccaga tccgcccata ccaacagtaa agacttccat aaatggtttc
     1561 gtaataatat gtggcaatgg gagtccagct ttataggcat ctaaattttc aagcattaac
     1621 gtattccaaa tcgggtccat taccgagttg acgatgattt gaccatgcag tccgaaaaac
     1681 cataatactt ggacaaaaaa taaagcgatt agtgttggaa caattcctga accaagcccc
     1741 actaaaggct tttgaataac agtataaaca acatcatgta agtttgtatg gaagaagaat
     1801 tgtaccataa cattaattgc taaaaaaata cttaatgtta agatagcggg aataagtgct
     1861 gcaaatgatt tagctacagc aggtggaact cctgcaggca ttttgattgt ccaatcccgt
     1921 tgaacaaaaa atcgatataa ttctgcagca ataaaaccag taatcattcc gataaacata
     1981 ccttttgccc caagtcgatc taacgaaagc gctccagtaa taagctctcc atcaggacta
     2041 ttaaagaaaa atggcgttaa aatcaagaag ctagcaaggg caactgcccc tccataaatt
     2101 gcttcaactt tataatattt agatagtgaa tatccaattc caaaaacaac aaaaacagtc
     2161 ataatactca tcgtggcgct ttgggcattc ccaagataca actgtaaaac tgccttcgtt
     2221 tcatcactcc aaaacggtag attcattaaa accaccgcaa tcgaaccaaa cattgttagc
     2281 ggaaatgcca acatgaaagc atctcttaaa gtggttaagt acctattctc tcctagtttt
     2341 gcagcaagag gcattaactt ttccccaagt aactccataa acttattcac tttacttccc
     2401 ccaaacat
//
LOCUS       DASDYO010000199         2276 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.201, whole genome shotgun sequence.
ACCESSION   DASDYO010000199 DASDYO010000000
VERSION     DASDYO010000199.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2276)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2276)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2276
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.201"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            66..494
                     /locus_tag="U0290_002904"
     CDS             66..494
                     /locus_tag="U0290_002904"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990847.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302928.1"
                     /translation="MFALRIKELRKESKKTQEEMAKILGVAKTTYASYEQAKRMPDAE
                     IQNKIANYFDVSLDYLHGRSRHKNINAEGFTPKEEIDMKKRMDALREDLKNGDGLLYD
                     GEPITTEAMESILDAMEFAEKQATRINRKYAPKDKKNNIE"
     gene            511..930
                     /locus_tag="U0290_002905"
     CDS             511..930
                     /locus_tag="U0290_002905"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731470.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ImmA/IrrE family metallo-endopeptidase"
                     /protein_id="HEM2302929.1"
                     /translation="MWPTAMIEKLRNKHHTSDPFELCEILNIIVTPWDLANDTNGFYK
                     YVRRNRFIFYNSNLPDHQIKYVVAHELGHAVLHTRINATFTKSIYWSNLNKIELEAHH
                     FAVSLLLSDIDIESFDTKKEICLYTGIPLELENFIMK"
     gene            978..1370
                     /locus_tag="U0290_002906"
     CDS             978..1370
                     /locus_tag="U0290_002906"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003731469.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302930.1"
                     /translation="MGIFSKVETLEIISGKEQIGLKSNLTYMTEIAPGVVVFDNNETQ
                     YVYQGFIWNQDSKRSAGKTATGAIVGGVLTGGIGAIAGGAIGAKKKDISYAVISLLRV
                     SDASPVQLIIKCNKKKASKLGSFTIGRV"
     gene            1460..>2276
                     /locus_tag="U0290_002907"
     CDS             1460..>2276
                     /locus_tag="U0290_002907"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990844.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="recombinase family protein"
                     /protein_id="HEM2302931.1"
                     /translation="MTVGIYIRVSTEEQVKEGFSISAQKEKLKAYCTAQGWEDFKFYV
                     DEGKSAKDMHRPLLQEMITHIKKGLIDTVLVYKLDRLTRSVVDLHNLLSIFDEYNCAF
                     KSATEVYDTSSAMGRFFITIISSVAQFERENTSERVSFGMAEKVRQGEYIPLAPFGYV
                     KGPDGKLIINEAEKEIFLHVVNMVSTGYSLRQTCEYLTNIGLKTRRSNDVWKVSTLIW
                     MLKNPAVYGAIKWNNEIYENTHEPLIDKTTFDKLANILSIRSKSTTSRRGHVHH"
BASE COUNT          850 a          328 c          444 g          654 t
ORIGIN      
        1 ttttttaatt taaaatagta agtacgcaat ttgtatagta taatccgaaa cgaggaggtg
       61 cacatatgtt cgcattaaga attaaagaat tgagaaaaga aagtaaaaaa acacaagaag
      121 aaatggctaa aatattgggc gttgcaaaaa ctacttatgc ttcatacgaa caagccaaaa
      181 gaatgcccga tgctgaaatt cagaataaaa tagctaacta ttttgatgta agtctggact
      241 atttacatgg cagaagtcgc cataaaaata taaatgcaga aggtttcact cccaaagaag
      301 aaatagatat gaaaaaaaga atggatgctc ttagagaaga tttgaaaaac ggggacggat
      361 tactttatga tggtgagccg attacaaccg aagccatgga aagtatttta gatgcaatgg
      421 aattcgctga aaaacaagca actcgtatca atagaaagta cgcgcctaaa gacaaaaaaa
      481 ataatataga gtaaatcggg ggtattctat atgtggccaa ctgcaatgat tgaaaaactt
      541 agaaataaac atcacacatc tgatccattt gaattatgcg aaatactaaa tattattgtt
      601 acgccttggg atttggccaa cgatactaat ggcttctata agtatgtgcg tagaaataga
      661 ttcatttttt acaatagcaa tttacctgat catcaaatta agtatgttgt agcacacgaa
      721 ttgggacatg cagtactaca tacgaggatt aatgctacat ttacaaaatc aatatattgg
      781 tctaacctaa acaaaattga gttggaagca catcactttg ctgtaagttt attgttgtca
      841 gatatagata ttgaaagttt tgatacaaaa aaagaaatat gcctatatac aggtatacca
      901 ttagaattag aaaattttat aatgaaataa tcgtgcatta caattatata attaactaga
      961 aaaaggagaa gatacagatg ggtattttta gcaaagtaga aacacttgaa ataatcagtg
     1021 gtaaggagca aatcggatta aaatcaaatc taacttatat gacagaaatt gcacctggcg
     1081 ttgtcgtttt tgacaataat gaaacacaat atgtctatca aggatttata tggaatcaag
     1141 attcaaaacg aagtgcaggt aagactgcaa caggagcaat tgtaggtggt gttcttactg
     1201 gtggaatcgg tgcaatagct ggaggagcaa ttggggctaa gaaaaaagat atctcatatg
     1261 cggtaatctc tttacttcgt gtttctgatg cgtcacctgt tcaattaatt attaagtgca
     1321 ataagaagaa agcatctaaa cttggaagtt ttactatcgg aagagtttaa atagcttgat
     1381 tataaagttt tgccctactc gggcttttct ttaaaaccaa aaacagaaca tacgtactat
     1441 ttcggaggtg agcaagttca tgactgtagg gatttatata agggtttcca ctgaagaaca
     1501 agtgaaagaa ggcttttcta tatcagcaca gaaagagaag ttaaaagcat attgcacagc
     1561 tcaaggatgg gaagatttca agttttacgt cgatgaaggt aaatcagcaa aagatatgca
     1621 ccgccctctt ctacaagaaa tgattacaca tataaaaaag ggacttattg acacagttct
     1681 tgtatataaa ttggatcgtc ttactcggtc tgttgtagat ttgcataatt tattaagtat
     1741 atttgatgaa tataactgtg catttaaaag cgctactgaa gtctacgata cttcttccgc
     1801 tatgggcaga tttttcatta caataataag ttcagttgct caatttgaaa gagagaatac
     1861 atctgagcgt gttagttttg ggatggctga gaaagtgcgg caaggagaat atatacccct
     1921 tgctccattc ggttatgtta aagggcctga tggaaaactt attataaatg aagcagaaaa
     1981 agaaatattt ttacatgtag taaatatggt ttctactggt tactcattac gacaaacatg
     2041 tgaatatcta actaacattg ggttgaaaac caggcgttca aatgacgtgt ggaaagtatc
     2101 tacactaatc tggatgttaa aaaatcccgc tgtttatggt gcaataaaat ggaataatga
     2161 aatatatgaa aatacacatg agccactaat tgataagaca acatttgata aactggcgaa
     2221 tattctatca ataagaagta agtcgacaac aagtcgtcgt ggccacgttc atcacg
//
LOCUS       DASDYO010000200         2217 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.202, whole genome shotgun sequence.
ACCESSION   DASDYO010000200 DASDYO010000000
VERSION     DASDYO010000200.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.202"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            336..929
                     /locus_tag="U0290_002908"
     CDS             336..929
                     /locus_tag="U0290_002908"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728337.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TetR/AcrR family transcriptional regulator"
                     /protein_id="HEM2302932.1"
                     /translation="MPKLVTGYERQQTKNLIIEHTSHLIYIKKGIQGFTVEDITRAAR
                     IGKRKFYTCFPSKEACLFEVVEYSYQAQLEAFKKIMEEKGSLKSKMTRFLKEVYLSEK
                     SINNYFSPEDFHAILQKLPPTYTEREERMTSEVLETAMTYIDLTRAQWEALVMLLDCL
                     TYTATRSYVETAKKAKEETLDILINSIADYVEKQTQC"
     gene            957..1736
                     /locus_tag="U0290_002909"
     CDS             957..1736
                     /locus_tag="U0290_002909"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003728338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="methyltransferase domain-containing protein"
                     /protein_id="HEM2302933.1"
                     /translation="MNKETERKLAASLTSQSIEILPFIPYFLQDFFELGSSPKDITYL
                     IKQHMPLSAESNFLDLACGKGAVSIGIAKELGNPVKGIDLIPAFIEEAKCKAKEAQVE
                     SLCQFEVGDVNKSVQNEKNYDAVIFGAAADILGNPAETLEKLQGTVKEGGYIIIDEAY
                     VPELAHNNQVKYQNYEYLTRNEWLNLFEQNQLQLVEELEGTAEVDFELEKQHLLTRAN
                     ELIQQYPEKKTLFEGYLKSQWSEYDDLEEHLIAVTWILHKK"
     gene            1758..>2217
                     /locus_tag="U0290_002910"
     CDS             1758..>2217
                     /locus_tag="U0290_002910"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2302934.1"
                     /translation="MREYLDSKSQKKVALLEKIFYAENHTSTQEELLNDLNITYPTLI
                     STIKTINFDIERFGYKAFSIVHSAPNLSYTLKISDNCSIQLIINAYIRESPKFQILET
                     LLLSSFPNLQVLANEVHVSYSGIKKEIKELNEELRERNLYISTGSQVEITG"
BASE COUNT          821 a          329 c          427 g          640 t
ORIGIN      
        1 atagaaatag cgtgaaacat tggcgttcta agagagaaga caaatttttg tcttctcttt
       61 tttcttgttt tactttgaat cttacttgct tcatcaatgg gagcgtttat gtaagattgg
      121 aaaaatgtaa aagataagat atacctgata aaatattttt ttcaaatcta atactaaact
      181 attagtaaac gtattcgata taagaaccgt ggaaaatcca tttcacctca tttgacattg
      241 ttaaatattt agtttaaggt gtttttgtag aactggaaat tgataaatag ttccattaaa
      301 agcgatatgc aagaaatttt tcaaggagga gcaaaatgcc aaaactcgtt acgggatatg
      361 agcgtcaaca aactaaaaac ctcattatcg aacatacaag ccatttaatt tatataaaaa
      421 aaggaattca aggttttact gtggaggata ttactcgagc agctaggatt ggaaagcgaa
      481 aattctatac gtgttttccc tccaaagaag catgcctatt tgaggtggtg gaatattcct
      541 atcaagcaca attagaggca tttaaaaaaa ttatggagga gaaaggttcg ttaaaaagca
      601 agatgactcg ttttttgaaa gaagtctatc tttcagaaaa gagtataaat aactactttt
      661 caccggaaga tttccacgca atactccaaa aactccctcc aacatatacg gaaagagaag
      721 aaagaatgac aagtgaagtc ctggaaactg ccatgacgta tatcgatctt acgagagctc
      781 aatgggaggc tttagtgatg ttactggatt gtttgactta cactgcgaca aggagttatg
      841 tagaaactgc caaaaaagcg aaagaagaga ctttggatat attaataaat tctatagctg
      901 attatgtaga aaaacagact cagtgctaac gaaaaatatt ttaggagggt aaataaatga
      961 ataaagaaac cgaacgaaag cttgctgcgt cactcacttc tcaatcaata gaaatattac
     1021 cgtttattcc gtatttttta caagattttt ttgaattggg tagtagtccg aaagatatta
     1081 cttatttaat taagcaacat atgccgttat cagctgaaag taattttttg gatttagctt
     1141 gcggaaaagg agctgtttcc attggtatcg ctaaggaact aggaaaccct gtcaaaggaa
     1201 tagatttaat tccggcattt atagaagaag caaaatgcaa agcgaaagaa gcgcaagtag
     1261 agtcactgtg ccaatttgaa gtaggagatg taaataaatc ggttcaaaac gaaaaaaatt
     1321 atgatgccgt tatatttggt gcagcagcag atatacttgg aaatccagca gaaacgttgg
     1381 aaaaattgca gggaactgtt aaagaaggcg gttatattat tatagacgaa gcatatgtgc
     1441 ctgaattagc gcacaataac caggtgaagt atcaaaatta tgaatatctc actcgaaacg
     1501 aatggctgaa tttatttgaa cagaatcaat tacaattggt ggaagagcta gagggaacag
     1561 cagaagtgga ttttgaactg gaaaagcaac acttattaac aagagccaat gaattgattc
     1621 aacaatatcc agagaaaaaa accctttttg aaggatacct taagagccaa tggagtgaat
     1681 acgatgactt agaggaacat cttattgctg ttacctggat tttacataaa aagtaaacat
     1741 tgaaaggaag tgttttaatg agagaatatt tagattcaaa aagccaaaaa aaggtagcgc
     1801 ttcttgagaa gattttttat gcggaaaatc atacaagtac acaagaggaa ctattaaatg
     1861 atttgaacat tacgtatcca accctcattt ctacgattaa aacaattaat tttgatattg
     1921 aacgatttgg atacaaagcg ttttcgattg ttcactccgc gccaaatttg tcctatacct
     1981 taaaaatatc ggataattgt agtattcaac tcattatcaa cgcctatatt agagagtcac
     2041 ccaaatttca aattctcgaa actttattgc tgtcttcctt ccctaactta caagtattgg
     2101 caaacgaagt acatgtttct tattctggga taaagaaaga aataaaggaa ttgaatgaag
     2161 agctaaggga acggaacttg tatatttcta caggaagtca ggtagaaata acagggg
//
LOCUS       DASDYO010000201         2217 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.203, whole genome shotgun sequence.
ACCESSION   DASDYO010000201 DASDYO010000000
VERSION     DASDYO010000201.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2217)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2217)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2217
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.203"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            298..1047
                     /gene="rpsB"
                     /locus_tag="U0290_002911"
     CDS             298..1047
                     /gene="rpsB"
                     /locus_tag="U0290_002911"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465183.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="30S ribosomal protein S2"
                     /protein_id="HEM2302935.1"
                     /translation="MPVISMKQLLEAGVHFGHQTRRWNPKMKKYIFTERNGIYIIDLQ
                     KTVKKVDEAFNFMREVASDNGTILFVGTKKQAQESVRDEAIRSGQYFVNHRWLGGTLT
                     NFETIQKRIQHLKKIERMEADGTFEVLPKKEVVLLKKEQEKLERFLGGIKDMKGLPDA
                     LFIVDPRKERIAVAEARKLHIPIIGIVDTNCDPDEIDYVIPANDDAIRAVKLLTAKMA
                     DAIIEVNQGEELTEAEVAPVEEKATEETTEA"
     gene            1127..2011
                     /locus_tag="U0290_002912"
     CDS             1127..2011
                     /locus_tag="U0290_002912"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465182.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="elongation factor Ts"
                     /protein_id="HEM2302936.1"
                     /translation="MANITAQMVKELREKTGAGMMDCKKALVETEGDMEKAIDYLREK
                     GIAKAAKKSDRVASEGMTHVISNEKHAVVLEVNAETDFVAKNDNFQQLVDALAKQILA
                     VRPDSLEDALKTEMPNGQTVQDYITEAITKIGENISLRRFEVKEKADNSAFGEYIHMN
                     GRIGVLTLLEGTTDTTVAKDVAMHIAAINPKYISREDVSTEEVEHEKEVLTQQALNEG
                     KPANIVEKMVEGRLKKYLSEISLEDQPFVKNPDITVGDYVKQSGGKVVSFVRFEVGEG
                     IEKKEDNFVEEVMSQVKK"
BASE COUNT          793 a          379 c          433 g          612 t
ORIGIN      
        1 ggaaatgcct tatgaaattg cgcaatttaa aagaataaaa aaacatggtg ttcttagttt
       61 agccgaaaag cttgaaatga ttgttgaaaa aaattagtta tcgaagaaag aagatatgta
      121 ccacgggttg catatttcct gtttttatgg tatattagga aacggtgtta aatcacacac
      181 gcacggtgac agactgagaa ggtgcttaac gacttgttcg cttaagtttt tcagctggtt
      241 gatccatgcg gagggcggtt atccgcaaaa aataaaccaa taggagggaa taacacaatg
      301 cctgttattt caatgaaaca attactcgaa gcaggagttc acttcggcca ccaaacgcgc
      361 cgttggaacc caaaaatgaa gaaatatatc ttcacagaaa gaaatggtat ttatatcatt
      421 gacctacaaa aaacagtgaa aaaagtagac gaagctttca acttcatgcg tgaagtagct
      481 agcgacaacg gaactatcct gtttgtagga actaaaaaac aagctcaaga atccgttcgc
      541 gacgaagcta tccgttctgg acaatatttc gtgaatcatc gttggttagg tggtacttta
      601 actaactttg aaactattca aaaacgtatt caacacctta aaaaaatcga aagaatggaa
      661 gcagatggaa cttttgaagt ccttcctaaa aaagaagttg tccttcttaa aaaagaacaa
      721 gaaaaattag aacgcttctt aggcggaatc aaagacatga aaggtcttcc tgatgcatta
      781 ttcatcgttg acccacgcaa agaacgtatt gcggttgcag aagctcgtaa acttcatatt
      841 cctatcatcg gtattgttga tacaaactgt gatccggatg aaatcgacta cgtaatccct
      901 gcaaatgatg acgctatccg cgcggttaaa cttttaactg ctaaaatggc tgacgctatc
      961 attgaagtga accaagggga agagttaacg gaagcggaag ttgctcctgt agaagaaaaa
     1021 gctacagaag aaactactga agcataagat tttatttgaa actttcaagg tgataaggca
     1081 ctattcttat cacctttttt aaagagaaaa attggaggga aaataaatgg ctaatattac
     1141 agctcaaatg gtaaaagaat tacgcgaaaa aactggtgct ggtatgatgg attgtaaaaa
     1201 agcacttgta gaaacagaag gagatatgga aaaagcaatt gactatcttc gtgaaaaagg
     1261 aatcgctaaa gctgcgaaaa aatctgatcg tgttgcttct gaaggtatga ctcatgtaat
     1321 cagcaatgaa aaacatgccg tagtacttga agtaaatgct gaaacagatt tcgttgctaa
     1381 aaacgataac ttccaacaat tagttgacgc tttagctaaa caaattcttg cagttcgtcc
     1441 agatagctta gaagatgcgc ttaaaacaga aatgcctaat ggtcaaactg ttcaagacta
     1501 catcactgaa gcaattacaa aaatcggtga aaacatttcc cttcgtcgtt ttgaagtaaa
     1561 agaaaaagca gacaactctg ctttcggtga atacatccac atgaacggac gtattggtgt
     1621 tcttacactt cttgaaggaa ctactgatac tactgttgca aaagacgttg caatgcacat
     1681 cgctgcaatc aaccctaaat acatttctcg tgaagacgtt tctactgaag aagtggaaca
     1741 cgaaaaagaa gtattaactc aacaagcgtt aaacgaaggc aaaccagcta atatcgttga
     1801 aaaaatggta gaaggccgtt tgaaaaaata tctaagcgaa atttccttag aagaccaacc
     1861 tttcgttaaa aacccagaca tcactgtagg tgactacgtg aaacaaagcg gtggtaaagt
     1921 tgtatcattc gtacgtttcg aagtaggcga aggaatcgag aaaaaagaag ataactttgt
     1981 tgaagaagta atgagccaag tgaaaaaata aatccacttt aaatcgattt tatatgatat
     2041 caaaaccccg tattttctta ggaaatacgg ggtttttatt tttttgattt catttgaata
     2101 tcatacaata tcaaatgatt gtgggatttt tttaatttta ttttatccca caattttcta
     2161 gatttcttac aatctgtctt tcatcgtact cattaatttt tctcgtgtct cgtctgt
//
LOCUS       DASDYO010000202         2216 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.204, whole genome shotgun sequence.
ACCESSION   DASDYO010000202 DASDYO010000000
VERSION     DASDYO010000202.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2216)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2216)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2216
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.204"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(107..961)
                     /gene="fba"
                     /locus_tag="U0290_002913"
     CDS             complement(107..961)
                     /gene="fba"
                     /locus_tag="U0290_002913"
                     /EC_number="4.1.2.13"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466079.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="class II fructose-1,6-bisphosphate aldolase"
                     /protein_id="HEM2302937.1"
                     /translation="MPIVNMTDMLKKALAGKYAVGQFNINNLEWTQAILKAAEAEKAP
                     VILGVSEGAAKYMGGFKTVVKMTEGLVEDLKITVPVAIHLDHGSSFDSCKAAIDAGFS
                     SVMIDGSHHPIDENIAMTKQVVDYAHAKGVSVEAEIGTVGGDEDGVTGGINYADPQEC
                     LRVVKEANIDALAAALGSVHGPYHGEPVLGFDEMKEISELTGAPLVLHGGSGIPEHQI
                     KKAIELGHSKINVNTECQIVWTAAVREKLATDDKVYDPRKVIGPGVDAIIKTVTEKIQ
                     EFGSNGKA"
     gene            complement(1129..2049)
                     /locus_tag="U0290_002914"
     CDS             complement(1129..2049)
                     /locus_tag="U0290_002914"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466080.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="diacylglycerol kinase family lipid kinase"
                     /protein_id="HEM2302938.1"
                     /translation="MQKKAMIIYNPAAGKNKFRKLLPDAEKILTEADFEVTLVPSTPA
                     PKSTTFIAKQAAEAGFDVVIAAGGDGTVNEVVNGLMQVDTPPKLGVLPVGTTNDYARA
                     LNFAKNPLEALRIIAKQETIRVDIGKANETEFFINNAAGGKITEITYAVKESMKSKWG
                     RLAYLFSGLTVLPKLSPVYVEIAYNDKIFKGEILLFFVNKSNSVGGMETLCPPAELNS
                     GMFELLILKKVSPKTLFQLFASIKKGTHLSSPHVIHARTNKVTINSEADLNVSYDGVY
                     GGKAPYTLEVIPEALEVFADTNRISSRLRG"
BASE COUNT          641 a          461 c          368 g          746 t
ORIGIN      
        1 cgataattaa attccctcta tactaaccct cgcaatacat aaaaaataac tggtaaaatc
       61 aacaagtgat cctaccagtt atttttatat catcataaag ttcgtcttac gctttaccgt
      121 tagaaccaaa ctcttgaatt ttttctgtta cagttttgat aatcgcgtcc acaccagggc
      181 cgattacttt acgtggatca taaactttgt catcagtagc taatttttcg cgaacagctg
      241 cagtccaaac gatttggcat tcagtgttaa cgttgatttt actgtgacct agttcaattg
      301 cttttttgat ttggtgttca ggaattccag aaccaccgtg aagtacaagt ggagcacctg
      361 taagttcgga gatttctttc atttcgtcaa aaccaagaac aggttcgccg tggtaaggac
      421 cgtgaacaga acctaatgct gcagctagtg catcaatgtt agcttcttta actacacgta
      481 aacattcttg tggatcagca tagttgattc cgccagtaac tccgtcttcg tctccaccaa
      541 cagttccaat ttcagcttca acagatacgc ctttagcatg cgcatagtca acaacttgtt
      601 tagtcattgc aatgttttcg tcgattgggt ggtgagagcc gtcgatcatt acagaagaga
      661 atcctgcatc gatagccgct ttacaagaat caaagcttga accatgatca agatgaatcg
      721 caacaggtac agtgattttc aggtcttcta caagtccttc agtcattttt acaactgttt
      781 tgaatcctcc catgtattta gcagctcctt cagaaactcc taaaataact ggtgcttttt
      841 ctgcttctgc agctttcaaa atagcttgag tccattcaag gttgttgatg ttgaattgac
      901 caacagcata ttttccagct aatgcttttt tcagcatgtc tgtcatgtta acgataggca
      961 taatacaatt tcctccctca ggaatttagg aaaaccattt tgattttccc taagatttga
     1021 atttccgccg tgaaaaatag tggcagctat tttcccctaa caaacatatg ataacagatt
     1081 tgtgatgaat ttaccataaa aactagaaaa ttttctagtg taaacgcttt agcctctaag
     1141 acgggaagaa atccgatttg tatcagcaaa tacttctaat gcttctggga ttacctctaa
     1201 tgtatacggt gcttttcctc catatacacc atcatagcta acatttaaat ctgcttcgct
     1261 gtttatagta actttatttg ttcgcgcatg gattacatgc ggactactta agtgtgtacc
     1321 cttttttata gaagcaaata attgaaataa tgttttagga gagactttct ttaaaattaa
     1381 taactcaaac attccactat ttaattcagc aggaggacac aatgtctcca taccaccgac
     1441 cgagttggac ttatttacaa aaaacagcaa aatctcacct ttaaatattt tatcgttata
     1501 tgcaatttcg acgtacactg gtgatagttt tggaagaaca gttaaaccgc taaacagata
     1561 agcaagtctg ccccatttgg atttcattga ttcttttaca gcataagtta tttcggttat
     1621 tttcccacca gctgcgttat taatgaaaaa ttcggtctca ttggctttac cgatatcgac
     1681 acgaattgtt tcttgcttgg ctataattcg aagtgcttcg agtggatttt tagcaaaatt
     1741 taacgctctc gcataatcat tcgtcgttcc aaccggtaac actcctagtt tcggtggggt
     1801 atcaacttgc atcaacccat taacaacttc atttactgta ccatctccac ctgctgcaat
     1861 tacaacatca aaaccggctt ctgcagcttg tttggcaata aatgtagtac ttttaggtgc
     1921 tggagttgat gggactaaag ttacttcaaa atctgcttct gttaaaattt tttctgcatc
     1981 cggaagtaat tttctaaact tatttttacc cgctgccgga ttgtatatta tcatcgcttt
     2041 cttttgcaaa ttgccgctcc ctctttccta tatatataat ttagtttcct attttggcct
     2101 taggatgtca acttgtttga ctgaaagaaa acgctagtta aattgaaggg ctttttacct
     2161 attacaattc acatacatta aattagttaa aattacattt tgggacacca tatcga
//
LOCUS       DASDYO010000203         2202 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.205, whole genome shotgun sequence.
ACCESSION   DASDYO010000203 DASDYO010000000
VERSION     DASDYO010000203.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2202)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2202)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2202
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.205"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..2164
                     /locus_tag="U0290_002915"
     CDS             <1..2164
                     /locus_tag="U0290_002915"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958804.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2302939.1"
                     /translation="IFICFLTLTTIVPWNTLETKAASTSWLEQELDGNEAFITETERV
                     LSKNREDITLADLETIQELDIYGDASSIPDKISDYKNLNTLLALNGTISEIPTSITKL
                     TKLTRINVDNNNFQEFPMILLQMPSLSSIEINRNKIKEIPSEITTLSPHLGSLDVRYN
                     ELITLPDNIFTTEWESKLSLLTTGNQLVSDIPADWLDNFNQADNMLEFYNNPPNDYHQ
                     KQDQLTYSGARIEVPLNTDLKTLTPDKTKLGLKSGRTLFEQHEFMYYDDGTSNNILTN
                     GVATATGNGYITIKSTLSTNSNPFAKVRVPITVTPPVKGGDVTVQYKDTTGVVLADSI
                     TLSGNVGENYTTTAKTIDGYSLTTTPTNANGTFSTNPQTVTYTYKKDPIAQPVTVNYI
                     DTDGKTIAPTETLSGNVGENYTTTAKTIDGYSLTTTPANANGTFSTNPQTVTYTYTKD
                     PIAQPVTVNYIDTDGKTIAPSETLTGNISENYTTTAKTIDGYSLTTTPANAKGTFSTE
                     PQIINYIYAKNAETAQPITVNYRNSTGQKIAKSEVLTGNIGESYSTQPKTIAGYTLTT
                     IPPNAKGTFTTNAQTVTYMYTPIAISALPVTVNYLDENGKEIADSVVLNGRVGEAYNT
                     LAKEIDGYTLIKTPTNANGVFSAEAQSIDYIYRKNKPVVIVNPPIKNPIIKIDSSTNV
                     IKEETSVLPKTGDSNPYNDFLAGILLLSSAMFLWKNHK"
BASE COUNT          826 a          444 c          336 g          596 t
ORIGIN      
        1 aatttttatt tgttttctca cgctaacaac cattgtccct tggaatacgc tcgaaacgaa
       61 ggcggcatcc acttcttggc ttgaacaaga attagatggt aatgaagcct ttatcactga
      121 aacagaaaga gtcttgtcaa aaaatcgtga agatattaca ctcgcagatt tagaaacaat
      181 acaagaatta gatatttatg gtgatgcttc atcaataccc gacaaaattt ctgattataa
      241 gaatctcaat actttacttg cccttaatgg aacgatttca gaaattccaa ctagtatcac
      301 taaactaaca aaactaacaa gaatcaacgt agacaataat aattttcaag aatttccgat
      361 gattctatta cagatgcctt ctctaagttc tattgagata aatagaaata aaattaaaga
      421 gattccttca gaaataacca cattatcccc tcatttagga tcgctggatg tacgctataa
      481 tgagctaatt acgcttccgg ataatatctt cactactgag tgggaaagta agctctcatt
      541 actaactaca ggaaatcaat tagtttctga cattcctgct gattggttag ataattttaa
      601 tcaagcagat aacatgctcg aattttacaa caatccacca aatgattatc atcaaaaaca
      661 agaccagcta acgtatagtg gagcaagaat tgaagtccca ttaaatacag atctaaaaac
      721 attaactcct gataaaacaa aactgggctt aaaatcaggc agaacgttat ttgaacaaca
      781 tgaatttatg tattatgatg acgggacctc taataacatt ctaactaacg gtgttgctac
      841 tgccacagga aatggctata taacaatcaa aagtacttta tcaaccaatt ccaacccttt
      901 tgcaaaagta cgagttccta tcacagtaac gcccccagta aaaggaggag atgttaccgt
      961 tcaatataaa gacacaactg gagtagtgtt agcagactcc attactttat ccggaaatgt
     1021 gggcgaaaat tatacgacaa cagctaaaac aattgacggc tattctttaa caactacacc
     1081 aaccaatgct aatggaactt tttcaacaaa cccacaaact gtcacatata cttataaaaa
     1141 agaccctata gcgcaaccag ttactgttaa ttatattgat acagatggaa aaacaattgc
     1201 tcccactgaa acattaagcg gaaatgtggg cgaaaattat acgacaactg ctaaaacaat
     1261 tgacggctat tctttaacaa ctacacctgc caatgctaat ggaacttttt caacaaaccc
     1321 acaaactgtc acatatactt acacaaaaga tcctatagcg caaccagtta ctgttaatta
     1381 tatcgataca gatggaaaaa caattgctcc ttctgaaacc ttaaccggaa atattagtga
     1441 aaactatacg acaacagcta aaacaattga cggctattct ttaacaacta cacctgccaa
     1501 tgccaagggg actttttcga cagaacctca aataattaat tatatctatg cgaaaaacgc
     1561 tgagacagcc caacctatta ccgttaatta tagaaactct acaggtcaaa aaatcgcgaa
     1621 aagtgaggtt ttaactggta atatcggaga atcttactca actcaaccga aaacaattgc
     1681 tggttacaca ctcacaacaa tacctccaaa tgcaaaagga acctttacaa caaatgcgca
     1741 aacagtaact tatatgtata cgccgattgc tatttccgcc ttaccagtga cagtgaacta
     1801 tttagatgaa aatggtaaag aaattgctga ctctgtagtt ctaaatggtc gtgtgggaga
     1861 ggcttataat acactagcta aagaaataga tggctacacg ttgataaaaa ctcctacaaa
     1921 tgctaatggt gtgttttcgg cggaagcaca atcaatcgat tatatctacc gtaaaaataa
     1981 accagtagta atagtaaatc caccaatcaa aaacccgatt attaaaatag attctagtac
     2041 caacgtaata aaagaagaaa cgtctgtctt accaaaaact ggcgattcca atccatacaa
     2101 tgactttttg gcaggaattc tactactatc ttcagcgatg tttctttgga aaaatcataa
     2161 ataaaaaccg aaaagacacc tttcttttcg gctgagattg ta
//
LOCUS       DASDYO010000204         2183 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.206, whole genome shotgun sequence.
ACCESSION   DASDYO010000204 DASDYO010000000
VERSION     DASDYO010000204.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2183)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2183)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2183
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.206"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(11..1201)
                     /locus_tag="U0290_002916"
     CDS             complement(11..1201)
                     /locus_tag="U0290_002916"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003727622.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="multidrug effflux MFS transporter"
                     /protein_id="HEM2302940.1"
                     /translation="MEKNIETKKINLALLVCLVGFPQISETIYTPSLTEIATSYGVSL
                     NLAQMTLSIYFLAFAVGVFFWGVSSDFLGRRKAMNFGIFIYILGCFVCLFSNNITMLF
                     IGRFVQAFGASTGSVTTQTILRDNYHGNDRHHLFAKISAALAFSPAIGPLIGGFIGQY
                     YGFRVVFLFLVVMGMILLFWSLKRLPETKTANATPFSVQKMVVIGKKMIFDRYTIAFG
                     VLIGIFNGILFSYYSEAPTIFIERFHFNQSQYGFMGCAVATATILGAWLSNWRLKQNS
                     PHKIIKEGILLALIGTLFLSMVALFPLTIQVIFYIFFISIILVGIGMSLPNCLSLALV
                     KFQEVAGTAGAFLSLGYYVIVSLCTFFIGVLHSGSILVFPAFCLVLLLIALLCIKIAA
                     RNNP"
     gene            1802..>2183
                     /locus_tag="U0290_002917"
     CDS             1802..>2183
                     /locus_tag="U0290_002917"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466298.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="lactococcin 972 family bacteriocin"
                     /protein_id="HEM2302941.1"
                     /translation="MKRKVCVLAIALPTVLSPMGALAAQNLNEGETSLDSLMSANKTG
                     EKVIFSETTTGKKPLLKAAQSAGGGTFWVTWGQDRHYSNYQHYKKMHRSSASNFRTTV
                     RSRWEPKSNLASVWIKSSLWGNKAN"
BASE COUNT          771 a          358 c          430 g          624 t
ORIGIN      
        1 cagttttttg ctaagggtta tttctagcag ctatttttat acagagcaag gcaattagaa
       61 gtaatactag gcagaatgcg ggaaatacaa gtattgatcc tgaatgcaaa acgccaatga
      121 agaaagtaca aagactgaca attacataat atcctaagct taaaaaggcg ccagctgtac
      181 cggcaacttc ttgaaatttc actagtgcta gacttaaaca atttggtaaa gacatgccaa
      241 ttcctactaa gataatagaa atgaagaaga tgtagaatat aacttggata gtaagcggga
      301 atagggcaac catgctaaga aatagagtgc caataagagc tagcaaaatt ccttctttaa
      361 tgattttatg aggtgaattc tgctttaagc gccagttcga tagccaagct cctaaaatag
      421 ttgccgtagc cactgcgcac cccatgaagc catactgact ctgattaaaa tgaaacctct
      481 caataaaaat agtaggagct tcagagtagt aactaaacaa tattccatta aaaataccaa
      541 ttagcactcc aaaagcaatt gtatagcggt caaaaatcat ttttttacca attactacca
      601 ttttctgcac actgaatggg gtggcgttcg ctgtttttgt ttctggtagt cgttttaaac
      661 tccagaacag caatatcatt cccataacta ctaaaaataa aaaaaccacg cgaaagccgt
      721 aatattgtcc gataaatcca ccaattaatg gcccaattgc cggtgaaaat gccaaagcgg
      781 ctgagatttt tgcaaataaa tggtggcgat cattaccgtg gtagttgtca cgcaaaatgg
      841 tctgtgttgt aacagaaccc gtacttgcgc caaatgcttg aacaaagcgt ccgataaaaa
      901 gcattgtaat attatttgaa aaaaggcaga cgaagcaacc aagaatatag ataaatatcc
      961 caaagttcat tgcttttcgt cgacctaaaa aatcggaact aacgccccaa aagaagacac
     1021 caactgcaaa agcaagaaag tagatgctta aagtcatttg agccaaattt aatgagacgc
     1081 cgtagctcgt agcaatctcc gttaaagaag gcgtataaat agtttcgcta atttgtggaa
     1141 accccacaag gcacacaagt aatgctaaat ttattttctt tgtttcgatg tttttttcca
     1201 taaaattctc tcctgaataa gttatttatc tgggaaaaaa acatctttca cagggaaatg
     1261 gtgggaccat gattttaata cgctcgtaaa aaagcatgca gtcacccctt tctattttaa
     1321 acggagaagg ttccgttttt tcgttaaagt ttattgtagt ataaatgggt ggaaagataa
     1381 agtgttggtg gacgattgaa taaatataca ctgatattta cttgaattca gcatttaagt
     1441 gaacaagttc aaatatatgt ggttaagtta agctggtata tgaaactttt gtgactatca
     1501 agcttgaggc tgaatagaaa catgtataat gagctgtcta gcgctttttt attctgaaaa
     1561 tggagttttt gtaacacgat atgtgtagaa aatgcactaa gacactataa ctttagctat
     1621 ttaggataag aatggagtcg ttcattacat tttggttata cattactttt ttgtgttaca
     1681 ttgggaatag ttggaatatt ataaaagtaa aaatttggag gtttcatagg gaaggatata
     1741 ttctaacctg tttatttggt tatgcaatat aactattaat tggaaagagg gggagaatac
     1801 aatgaagaga aaagtatgtg ttttagcgat agcattgcct acagtgttat caccgatggg
     1861 cgccttagct gctcaaaatc taaatgaagg agagactagc ttagattcac taatgagcgc
     1921 aaataaaaca ggtgaaaaag tgattttttc tgagaccaca acaggaaaaa aacctctatt
     1981 aaaagcagcg caatcagctg gaggcggtac tttctgggtt acatggggac aagatagaca
     2041 ttattcaaat tatcagcatt ataaaaaaat gcatagatca agtgcctcta atttcaggac
     2101 gacagtaaga agtaggtggg aaccaaagag caatctagca agtgtttgga ttaaatcatc
     2161 gctatggggt aataaagcta att
//
LOCUS       DASDYO010000205         2151 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.207, whole genome shotgun sequence.
ACCESSION   DASDYO010000205 DASDYO010000000
VERSION     DASDYO010000205.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2151)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2151)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2151
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.207"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            266..2089
                     /locus_tag="U0290_002918"
     CDS             266..2089
                     /locus_tag="U0290_002918"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465654.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="APC family permease"
                     /protein_id="HEM2302942.1"
                     /translation="MASPLKRLLIGRPLKTSEAGDQKLGKLKALAVLSSDALSSIAYG
                     TEQILLVLVTVSAAAMWYSLPIALCVLVLLFALNLSYKQIIYSYPHGGGAYIVSRENL
                     GNNAGLIAGGSLLVDYMLTVAVSVSSGTDAIVSAVPSLYPFAVPIAVLLVVGVTIINL
                     RGITESASLLAIPVYLFVFSIIALIFTGLFKVLTGMDASHETAAVGTHVQGVTIFLLL
                     RAFASGSASLTGIEAISNAVPLFKEPRPKNAAKTLTLMAGLLGFFFVGITVLAFVYGT
                     VPELKVTVLSQIAENVFGRNFMFYFIQATTALILVLAANTGFSAFPMLAFNLAKDKFM
                     PRMYLARGDRLGYSNGIITLAVGSILLIILFKGKTELLIPLYSVGVFIPFTLSQTGMI
                     VKWWKQRPKGWKKSLSANLLGASISFTVLLVLFLTRIESVWPVFVFMPIMIYVFHRTR
                     HHYRKVGPQLRIDETMDLPDFKGNAVIICVSDTTKVVEGALQYAKSIGDTVIAVHISI
                     DKKQEKEFVERWNRVHPEVRMANLFSPYRSISDPLMKFIDTAKQKADQDNYSLTVLIP
                     QFIPRKGWQNVLHNQTSLLIRTRLLMKRDVVVSTYPYHLKE"
BASE COUNT          662 a          349 c          413 g          727 t
ORIGIN      
        1 attaaattct tttttttctg aaaatataac tttggaaaac gggttattta tcttattaat
       61 gggtatgtat attgaaaggc gtgtgaaata aatttctact ttttaaagac gtaaaaacaa
      121 gcattatgaa caattattca cttgaaagat aattagtcag ctaaaataat acaaattagt
      181 attacaatct aaaatcagct gtgctataat gtgtctggtc aacttgaagt tagctaaaaa
      241 tcaaataaaa aaggtaggga atacaatggc ttcgccgcta aaaagactat taatcggccg
      301 ccctctgaaa acatcagaag ctggagacca aaaactgggg aaattaaaag ctttagcagt
      361 tctgtcatca gatgcacttt cttctattgc gtatggtaca gaacagatct tattggtact
      421 tgtaactgtt agtgctgccg ctatgtggta ttcattacca attgcgcttt gtgtacttgt
      481 tcttttgttt gctcttaatc tgtcttacaa acaaattata tactcttatc cgcatggtgg
      541 aggagcttat atcgtttcaa gagagaattt ggggaataat gccggtttaa tcgcaggtgg
      601 atctttacta gtagattata tgcttacagt tgctgtaagt gtttcttctg gaacagatgc
      661 aatcgtttct gctgtcccat cattatatcc gtttgcagtg cctatagctg tacttcttgt
      721 cgttggagta acgattatca atctgagagg tattactgaa tcagctagtt tacttgcaat
      781 accagtatat ttgtttgttt tttctattat agctcttata tttacaggtt tatttaaagt
      841 attaactggt atggatgcaa gtcatgaaac agctgcagta gggactcacg tacagggtgt
      901 aaccattttt cttttactaa gagcatttgc atctgggtca gcttctttaa cgggtattga
      961 agctatctca aatgctgttc ctttatttaa agaaccacga ccaaaaaatg ccgcaaaaac
     1021 attaacatta atggcaggct tacttggttt cttctttgtc ggaataacag tacttgcttt
     1081 tgtttatgga actgttcctg agctaaaggt aacggtgctt tctcaaattg ctgaaaatgt
     1141 atttggcaga aacttcatgt tttattttat tcaagccact acggcactta ttttagtttt
     1201 agcagctaat accggatttt ctgcatttcc gatgttagca tttaacttgg cgaaagataa
     1261 atttatgcca agaatgtatt tagcaagagg agatagactg ggctactcta atgggattat
     1321 tactttagct gtgggttcta tcctactcat tattttgttt aaagggaaaa cggaattact
     1381 cattccatta tactctgtcg gagtgttcat accatttacg ttgtctcaaa cagggatgat
     1441 agtaaaatgg tggaaacagc gtcctaaagg ttggaaaaaa tcattatcgg ctaatttact
     1501 tggagcatca atttcattta cagtattatt agtgttattc ttaactcgaa ttgaatctgt
     1561 ttggccagta tttgtcttta tgccaattat gatttatgtt ttccatcgta cgagacatca
     1621 ttataggaaa gtcggaccgc aacttagaat tgacgaaaca atggacttgc cggactttaa
     1681 agggaatgcc gtcattattt gtgtgtctga taccaccaaa gttgtagagg gtgcattaca
     1741 atatgctaaa tctattggtg atacagtcat tgctgttcat atctctattg ataaaaaaca
     1801 ggaaaaagaa tttgttgaga gatggaatag ggtgcatcct gaagtgcgta tggctaatct
     1861 gttttctccg tatcgatcta tttcagatcc attaatgaag tttattgata cagctaaaca
     1921 aaaagcagat caagacaatt actcactaac agtattaata ccacaattta ttcctagaaa
     1981 aggttggcaa aatgtccttc ataatcaaac aagcctattg attcgcacaa gacttctaat
     2041 gaaaagggat gtagtggttt ccacatatcc ttatcattta aaagaataac aagagaaaaa
     2101 aacggaagag accttcgggg gaagaggggg aactcttccg tttttgtaat g
//
LOCUS       DASDYO010000206         2122 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.208, whole genome shotgun sequence.
ACCESSION   DASDYO010000206 DASDYO010000000
VERSION     DASDYO010000206.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2122)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2122)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2122
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.208"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            114..662
                     /locus_tag="U0290_002919"
     CDS             114..662
                     /locus_tag="U0290_002919"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:YP_008475631.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="biotin transporter BioY"
                     /protein_id="HEM2302943.1"
                     /translation="MRDQKLKFLVVDALFAVIIALLAQVAIPLGPIPLTGQTFAIGLA
                     ATILGARHGTISVLVYIVLGAVGIPVFQGMTAGIGILFGPTGGFIVGFIFNALLTGWL
                     LEKTKFTVPYAIVANILGAIVTLIFGVLWLKVSTGLDWPTAFLTGMVPFIIPGIIKAV
                     FAALLGILIRDRLIKAKLLRAS"
     gene            738..1439
                     /locus_tag="U0290_002920"
     CDS             738..1439
                     /locus_tag="U0290_002920"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464125.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2302944.1"
                     /translation="MSLLNEENSFYNVDLLNLLKDSSEAVLPYKRIRFRRNQQILAEG
                     AETDYFYIIEDGVVSMSKNTCKEDSIINFLGKQECIGPLTLLGGAKSPVNYTTISEVS
                     VYQFERKYVLNKFLSSPDVFWQMNALMQSMVTPMLEREGYVNLPSSEKVLAGLIACGE
                     RFGRIESDGSCLIPYYFTQKILGNYLNLARAYVATNLRKLEEDGIIALSPKPWRVNNF
                     EIHKQKLKENHEPYI"
     gene            complement(1528..2055)
                     /locus_tag="U0290_002921"
     CDS             complement(1528..2055)
                     /locus_tag="U0290_002921"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464124.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HdeD family acid-resistance protein"
                     /protein_id="HEM2302945.1"
                     /translation="MKTFTRILVLLAGIAMIILGVWFLFHPGISLLTSTLMFGFLLLI
                     SGIFHTISYFSDRKSQNVSGWVLADGILSILLGFLLLFNEFDGTLTLVLLFGMWVLFA
                     GIMRTIGAFTAKQNNVQGWGWILTIGIIGIIVGFIALFNPVVSAIGIVLVVAIFFIVQ
                     GIGAIATFFFIGKNS"
BASE COUNT          681 a          362 c          397 g          682 t
ORIGIN      
        1 acatacacta gtgttcattg caaggtactg gttagaaaaa atagtattgt tttttcagga
       61 gataaatgtt aacctatttt agtaaaaagt ttacattaag gagagatatg tttatgcgtg
      121 atcagaaatt gaaattttta gtcgtagatg ctttattcgc agtcatcatt gctttacttg
      181 cacaagttgc tatcccactt ggtccaatcc cccttactgg gcagacgttt gccattgggt
      241 tagctgcaac cattcttgga gctcgtcatg gtacaatatc tgttttagtt tacattgttc
      301 ttggcgctgt gggtattcct gttttccaag gtatgacagc aggaattggg attctttttg
      361 ggccaactgg cggatttatt gtcggattta tttttaatgc actacttaca ggttggttgc
      421 tcgaaaaaac aaaattcact gttccttatg caatcgttgc taatatttta ggagccatcg
      481 ttacgttaat tttcggggtt ttatggctta aagttagcac tggacttgac tggccgaccg
      541 cctttttaac aggcatggta cctttcatta ttccaggcat tatcaaagcg gtttttgcgg
      601 cgttattagg gattctcatt cgtgatcgtt tgattaaagc caaattactt cgagcatcct
      661 aagtcccatt aatacacatt ttgagtcttc tcctatataa tgataatgat taacactgag
      721 aaaaggggac tcggtatatg tcattactga atgaggaaaa tagcttttac aacgtagatt
      781 tactcaattt attaaaagat tctagtgaag cagttcttcc atataaaaga attcgcttta
      841 ggcgcaacca acagatttta gctgaaggtg cggaaactga ttatttctac atcattgaag
      901 atggtgtcgt ttctatgagt aaaaatactt gtaaagaaga tagcattatt aacttcttag
      961 gtaaacaaga atgtatcggg ccgcttacac ttcttggtgg tgcaaaatca ccagtaaatt
     1021 acacaacgat aagtgaagtg agtgtttatc aatttgaacg taaatatgtt cttaataaat
     1081 tcttaagttc accagatgtt ttttggcaga tgaatgcact tatgcaaagt atggttacac
     1141 ctatgttaga acgggaaggt tacgttaatt taccttctag cgagaaagtt ttagcgggat
     1201 taattgcttg tggggagaga tttggaagaa tcgagtcgga tggttcttgt ttgattccct
     1261 attatttcac ccaaaaaatc ttgggaaatt atctaaattt agctcgagct tacgttgcaa
     1321 ctaacctgcg aaagctcgaa gaagatggca ttattgcgct ttcgccaaaa ccttggcgtg
     1381 ttaataattt cgagattcat aagcaaaaac taaaagaaaa tcacgaacct tacatatgag
     1441 tgcaaaatga atactttttt ctaattgtat ttcgtaaaaa tatgcataat aaaaagaagc
     1501 tatcaaacta agatagcttc ttttttatta actattttta ccaataaaga aaaatgttgc
     1561 gattgcgccg ataccttgaa cgatgaagaa aatcgcaacg acaaggacga taccaattgc
     1621 agagacaact ggattgaata gagcgataaa accaacaata atgccgataa taccgattgt
     1681 taaaatccag ccccagcctt gtacgttgtt ttgtttggca gtgaatgcgc caattgtacg
     1741 cataatacca gcaaataata cccacatacc gaaaagtaat acgagtgtta aagttccgtc
     1801 aaattcatta aataatagca agaaacctag taagatggat aaaatcccgt cagctagtac
     1861 ccagccagaa acattttgtg attttctgtc tgaaaagtaa gagattgtgt ggaaaatacc
     1921 agaaatcagt aataagaaac caaacattaa tgtcgaggtt aataatgaaa ttcctggatg
     1981 gaataagaac caaaccccta gtataatcat tgcaatcccc gctaataaaa caagaattcg
     2041 tgtaaaagtc ttcatttttt atttcaactc ccctttgttt tttctaattc aaccccattt
     2101 ttaatgaaat ataattagtc tt
//
LOCUS       DASDYO010000207         2118 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.209, whole genome shotgun sequence.
ACCESSION   DASDYO010000207 DASDYO010000000
VERSION     DASDYO010000207.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2118)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2118)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2118
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.209"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(60..>2118)
                     /locus_tag="U0290_002922"
     CDS             complement(60..>2118)
                     /locus_tag="U0290_002922"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465753.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="penicillin-binding protein 1A"
                     /protein_id="HEM2302946.1"
                     /translation="FRRFWKNKHIGKIFLLAGLVFLLSFIIYLVIVAKSADIDALKKG
                     LESATIIYDKDGDKAGELSSTDATFVSIDKISKNLQNAVVSIEDRKFYEHKGFDLKGI
                     ARAGVNLVTSGGISGGGSTITQQLAKNALLTQEQTFTRKAKEIFMAREIEKTYSKDEI
                     MEMYLNRSYFGNGEWGVENASLKYFGKSAADLNIPEAATIAGLLQAPSAYDPYQHIDK
                     ATNRRNMVLNAMVETGTISKAEGDKYKATKIVLNDQSKDPLANKYPWYVDAVINEAVN
                     EADITQDEIMQKGYKIYTELDQNYQTSLENVYNNDGLFPSNANDGTLVQSGAVLMDPA
                     TGGIRALVGGRGEHVFRGFNRATQMKAQPGSTMKPLAVYTPALQSGYDVDSMLKDEKI
                     TYKGNYTPTNVGGVYSGEVPMYKAVANSINAPAVWLLDQIGIDKGVKSVEKFGITVPE
                     KDRTLGLALGGMSKGASPVEMATAYATFANNGAKPESHIITKIVDPSGNTVYENVPKT
                     KQIISETVSNEMTSMLLDVINTGTGQSAAVSGHEMAGKTGSTQVPFDDTSGTKDQWFV
                     GYTPNLVGAVWMGYDKTDKEHYLTTTSSAGVSSLAHYVMNSGLQYQKSADFSTKSAAQ
                     ETAAKKEEEEKEKNSGSDFWSGVKEKADEAGETIKKGADKVKEFGGKVSDGIGNLIDS
                     IGN"
BASE COUNT          555 a          445 c          373 g          745 t
ORIGIN      
        1 taatgcaata caaaaaagca cattttacta gagttaacat agtaaaatgt gctttgaatt
       61 taattaccta tcgagtcgat taagtttcca atgccatcag aaacttttcc accgaattct
      121 tttactttat ctgcgccttt tttgattgtt tctccagctt catcggcttt ttctttcacg
      181 ccactccaaa agtcgctacc actgttcttc tctttttctt cttcttcttt tttcgctgca
      241 gtttcttgtg cagcactctt cgtactaaag tctgcggatt tctgatactg caaaccacta
      301 ttcattacgt agtgagccaa actagaaaca ccagcagaac tggttgtagt taggtaatgc
      361 tctttgtcag ttttatcata tcccatccaa acggctccga ctaggtttgg cgtgtagcca
      421 acaaaccatt gatctttagt accgcttgta tcatcaaatg gaacttgcgt ggaacctgtt
      481 ttcccagcca tttcgtgacc ggaaacagct gcactttgac cagttcctgt attgataaca
      541 tctaaaagca tggaagtcat ttcattagat actgtttctg aaatgatttg tttagtttta
      601 ggaacatttt cgtaaactgt attgcctgat ggatcgacaa ttttagtaat aatatgagat
      661 tccggtttgg caccattgtt agcaaaggtt gcatacgctg ttgccatttc tactggcgaa
      721 gcacctttac tcataccacc gagtgcaagt ccaagcgttc tatctttttc tggaactgta
      781 ataccaaatt tttcgacaga ttttacacct ttatcaatac caatttgatc aagtaaccaa
      841 acggcagggg cattaatcga gttggctaca gctttataca ttggaacttc tccactataa
      901 acgccgccaa cattggttgg tgtgtagtta cctttgtagg ttattttttc atcttttagc
      961 attgaatcca cgtcataacc agattgaagc gccggtgtgt ataccgcaag tggcttcatt
     1021 gtggaacctg gttgtgcttt catctgtgtc gcccggttga aaccacggaa gacatgttct
     1081 ccgcgtccac caacaagcgc tctaatgcct ccagtagctg gatccattaa aacagctcct
     1141 gattgaacta gtgtgccatc atttgcatta gaagggaata acccatcatt gttgtaaaca
     1201 ttttctaagg aagtttgata attttgatct aattccgtat agattttata tcctttttgc
     1261 atgatttcat cttgcgttat atctgcttca tttacagcct cattaataac tgcatcgacg
     1321 taccatggat atttattcgc aagtggatct tttgattgat catttaaaac tatttttgta
     1381 gctttgtatt tatcgccttc tgcttttgaa attgtgcctg tttcgaccat tgcatttaat
     1441 accatgttgc ggcgattagt cgctttgtcg atatgttggt atggatcata cgcacttgga
     1501 gcttgaagca atccagcaat tgtcgcagct tctggtatgt ttaagtctgc cgctgattta
     1561 ccaaaatatt ttaaggaagc attttctact ccccattccc cattaccaaa gtaagaacgg
     1621 tttaagtaca tttccataat ttcgtctttt gagtaggttt tttcgatttc acgagccata
     1681 aatatttctt tggcttttcg tgtgaaggtt tgttcttgtg tcagtagagc atttttggcg
     1741 agttgctgtg taatcgtact accgccacca gaaatgcctc cgctagtgac taaattaaca
     1801 cccgcccgag ctatcccttt caagtcaaaa cctttatgtt cataaaattt tctatcttca
     1861 atggaaacta ctgcattttg taagttttta gatattttat cgatggatac aaatgttgca
     1921 tcagtggaag aaagctcccc tgccttgtcg ccatctttgt cataaataat cgtggctgac
     1981 tctaagcctt tttttagtgc atctatgtcg gcagattttg ctactattac aagataaatg
     2041 ataaaactta ataaaaatac aagtccagct agtaaaaaaa tctttccgat atgtttgttt
     2101 ttccagaaac gtctaaat
//
LOCUS       DASDYO010000208         2072 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.210, whole genome shotgun sequence.
ACCESSION   DASDYO010000208 DASDYO010000000
VERSION     DASDYO010000208.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2072)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2072)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2072
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.210"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..929)
                     /locus_tag="U0290_002923"
     CDS             complement(<1..929)
                     /locus_tag="U0290_002923"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743966.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="BppU family phage baseplate upper protein"
                     /protein_id="HEM2302947.1"
                     /translation="MTALRKINATLDLNRKSWNIERIEAVQGDIDSLMIAVQIVENGK
                     LKDLTDYKPTFAVVLPGTVKYVIDDLHFSNEKMNEGYFEYTFVKEAFSVPGVYDTARF
                     ILQNEDGTELSGMPRFTYYVEKDPLQGKVVAESYISDFERLEQMIHAVELEIAELHDE
                     VTSESVRLDSEIAALDEKINTETSKLQSEADDLQQQFDNLNPAQFAQKTVLDEHVNDA
                     DIHVTATDKTNWNAKETVEGAQAKADKALADAKAFFELSSSVQSVTLTPKNGFVASQP
                     LIARYIKFGNRFLVIVSGIVGKGTGSGTGICAT"
     gene            complement(926..>2072)
                     /locus_tag="U0290_002924"
     CDS             complement(926..>2072)
                     /locus_tag="U0290_002924"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302948.1"
                     /translation="RTKYNVITEKYEEIELGSIKADFTDTLKSDISKIIDEVPTQDWM
                     QNELKAIGDSIQGANGGNIYTFPTFKPSTMYFMDTDNVNTAKKVMVMNREGIAFYQNG
                     ITGIPKTAWGIDGKFVADWIGTGTLRAIDIEGVSITGSSGFFDTLYSSFLPGLPAPQY
                     KEELKMGGGVGFHLTAKSVTKPYPALQMRMNTNGDLGLAIEAVNENTGAIDADRVVRL
                     SPFAGIETPLIQSDGWCCIGANSDGKTASIDRHTWISGGGPQLRYVPHRASNFETASS
                     EEYKKNIRKVKKTAFGKTAKQVINETDVFTYSHIADETNEKKIGFIAEQASDSLTTAD
                     GKAIDLYNSVAWLYQYAKENEEEKEALKAEVKELKNLVNKLVNEVSK"
BASE COUNT          558 a          458 c          322 g          734 t
ORIGIN      
        1 aacgttgcgc atatgccagt tccacttcca gtccctttgc ctacaattcc gctaacaatg
       61 actagaaacc gattgccaaa cttaatgtat cgagctatta aaggctgact tgcaacaaat
      121 ccgttcttcg gcgtcaaagt aacactttgt acagagctag atagttcaaa aaaagctttt
      181 gcatcagcaa gtgctttatc tgctttagcc tgcgcgcctt ctactgtttc ttttgcattc
      241 cagtttgttt tatcagtcgc tgtgacatga atatcagcat cattaacatg ttcatccaaa
      301 acagtttttt gtgcgaattg agcgggattt aagttatcaa actgctgttg caagtcatct
      361 gcttcacttt gaagcttact agtttctgta ttgatttttt catcaagtgc cgcaatttca
      421 ctatctaaac gcacgctttc acttgtcact tcatcatgta gttcagcaat ttctaattct
      481 acagcatgta tcatttgttc taatctctcg aaatcactta tatagctttc tgctactact
      541 tttccttgca acgggtcttt ttcaacataa tacgtaaaac gaggcatacc agatagctct
      601 gtcccatctt cattttgcaa aataaaacgg gctgtatcat acactcccgg aacagaaaat
      661 gcttctttta caaatgtgta ttcgaagtaa ccttcattca ttttttcgtt actaaaatgt
      721 aaatcgtcaa ttacatattt gaccgtgccc ggtaaaacta ccgcgaacgt tggcttataa
      781 tctgttaagt ctttcaattt accgttttcg acaatttgaa ctgctatcat cagagaatca
      841 atatcacctt gaactgcttc aatgcgctca atattccaag attttctatt taagtctaat
      901 gttgcgttta tttttcttaa agcagtcatt tactcacctc gtttactaat ttatttacta
      961 agtttttcaa ctcttttacc tctgctttta atgcttcttt ttcttcttcg ttttcttttg
     1021 cgtattgata tagccacgca acagaattat ataagtcaat tgcttttccg tcggctgtag
     1081 tcagcgaatc agaagcttgt tcagctataa atccgatttt cttttcgttt gtttcatcag
     1141 caatatgcga ataagtgaaa acatctgttt cgtttatgac ttgcttagct gttttaccaa
     1201 acgcagtttt ctttacttta cgtatatttt tcttatattc ttctgaacta gcagtctcaa
     1261 aattactagc tcgatgcggc acataacgta attgtggacc gccaccggaa atccaagtat
     1321 ggcgatcaat agaagcggtt ttaccatcag aattagcacc aatacagcac caaccgtcgc
     1381 tttgaattaa aggtgtttca attcccgcaa aaggggacag tctaacaacc ctatcagcat
     1441 ctatcgcacc cgtattttca ttcacagctt caatagcaag ccctaaatct ccattcgtgt
     1501 tcattctcat ttgcagagcg ggataaggtt ttgtcaccga ttttgcggtt aaatggaaac
     1561 caacacctcc gcccattttc agttcttctt tatattgagg tgctgggaga cctggtaaaa
     1621 aacttgaata caatgtgtca aaaaaacctg atgagcctgt tatgcttacc ccttcaatat
     1681 cgatagccct taaggtccct gttccaatcc aatcggcaac aaatttacca tctattcccc
     1741 atgcggtttt aggaatgccg gttatcccat tttgataaaa cgctatacct tctctgttca
     1801 taaccatcac tttttttgca gtattcacat tgtcagtgtc cataaaatac atggtcgaag
     1861 gtttaaatgt tgggaaagta taaatgttac ctccgtttgc gccttggata ctatctccta
     1921 ttgcttttaa ttcattctgc atccaatcct gagtcggaac ttcgtcgata attttgctta
     1981 tatctgattt taacgtgtct gtaaaatcag ctttaatgct gccaagttct atttcttcat
     2041 atttttcagt aataacatta tattttgttc ga
//
LOCUS       DASDYO010000209         2044 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.211, whole genome shotgun sequence.
ACCESSION   DASDYO010000209 DASDYO010000000
VERSION     DASDYO010000209.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2044)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2044)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2044
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.211"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..173
                     /locus_tag="U0290_002925"
     CDS             <1..173
                     /locus_tag="U0290_002925"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302949.1"
                     /translation="GEEASIPEPPELTELEKLTQDYADLMLYVAEVEQKTEQTQQDNA
                     NLLLSLAEAGVL"
     gene            174..320
                     /locus_tag="U0290_002926"
     CDS             174..320
                     /locus_tag="U0290_002926"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743969.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="XkdX family protein"
                     /protein_id="HEM2302950.1"
                     /translation="MINWYEKVKDYFLGGYYTEADVNKFVTLKKITRSQADEIIAMKE
                     AKAE"
     gene            361..666
                     /locus_tag="U0290_002927"
     CDS             361..666
                     /locus_tag="U0290_002927"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003733957.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302951.1"
                     /translation="MVLGSISIAGMSVGELIALISLIAAIVGFVIRWALVAPLRNMID
                     SLDITLKSLREEMSESKKDRMSLREKQNDHDKEIALLKREDKAIWKYVTEKNEKEVK"
     gene            666..947
                     /locus_tag="U0290_002928"
     CDS             666..947
                     /locus_tag="U0290_002928"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003723294.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage holin"
                     /protein_id="HEM2302952.1"
                     /translation="MKINWKVRLKNWRTVVATLITVLGVAWTAGGFTISDLDNWSVLW
                     LSFVRFLNSPMAIITTIVAVVGILMDPTTSKFSDSLKVMNYSEPRKDDK"
     gene            947..1897
                     /locus_tag="U0290_002929"
     CDS             947..1897
                     /locus_tag="U0290_002929"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010991149.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="N-acetylmuramoyl-L-alanine amidase family
                     protein"
                     /protein_id="HEM2302953.1"
                     /translation="MSVLQYNYINKNQFSRPGYKLLRVSKIVMHYTANPGASADNHRR
                     YFRDLKERYASAHIFIDDKEAICIIPLNEVAYHANERSCKLTALQASTSYYRGGNANL
                     TSIGIEMCLDKNGNITVATFNRSVDVAAELCKTYDLTASDIIRHYDVTGKNCPAPWVA
                     KPSELTRFRNAVNAKLKGASQNKNRHDGKVVDSAPLLTKMDFKSSPFRMYKAGTEILV
                     YEHNQYWYKTYIDDKLYYMYKSFCDVVAKKDAKGRIKVRIKSAKDLRIPVWNNTKLNS
                     GKIKWYAPNTKLAWYNNGKGYLELWYEKDGWYYTANYFLK"
BASE COUNT          730 a          307 c          430 g          577 t
ORIGIN      
        1 ctggtgaaga agcaagcatt ccagaaccac cagaattgac cgaacttgaa aaattaacac
       61 aagattatgc agacttaatg ctatatgtag cagaagtcga acagaagacg gaacaaacgc
      121 aacaagataa tgcaaactta ctattatctt tggcggaggc aggtgttttg taaatgatta
      181 actggtatga aaaagtaaaa gattattttt taggcggcta ctatactgaa gcagatgtta
      241 ataaattcgt tactttaaaa aagataacga gatcacaagc agatgaaata atcgctatga
      301 aagaagcaaa agccgaatag gcttattttt tatggaccga caacgagggg atgatgaaaa
      361 ttggtacttg ggagcatatc gatagcagga atgagcgtgg gggagttaat agctttaatt
      421 agcttaatag cggcaattgt ggggtttgta attagatggg cattagtcgc gcctttgcga
      481 aatatgattg attctcttga tataacttta aaaagtctta gagaagaaat gtctgaaagc
      541 aagaaagatc gtatgagttt acgagaaaag caaaacgacc acgataaaga gattgcttta
      601 ttgaaacggg aagataaagc gatttggaaa tatgttactg aaaaaaatga aaaggaggtg
      661 aaatgatgaa aattaactgg aaggtacgat tgaaaaactg gcgaactgtt gtggcaactc
      721 ttattacagt tctaggagtc gcgtggacag caggaggttt tactatatct gatttagata
      781 actggtccgt cttgtggctt tcgtttgtaa ggttcctaaa tagccctatg gcaattatta
      841 ccacaattgt agccgttgtc ggtattttga tggacccaac aactagtaaa ttctccgata
      901 gtttgaaagt aatgaattat tcagaaccaa gaaaggatga taaataatgt cagtactaca
      961 atataattat atcaataaaa atcaattttc acgcccagga tataagttgc ttagagtaag
     1021 taagattgtt atgcactata ctgcaaaccc tggggcaagc gcagataatc acagacgata
     1081 ttttagagat ttaaaagagc gttacgcttc tgcacatatt tttattgatg ataaagaagc
     1141 tatttgtatt atccctctaa atgaagttgc ataccatgca aacgaaagaa gttgcaaatt
     1201 aacagctctt caagcaagta caagttacta tcgcggcgga aatgcgaatt taacctcaat
     1261 tggtattgaa atgtgcttag ataaaaacgg gaatattact gtagcaacat ttaatcgatc
     1321 agttgatgta gctgcagagc tatgcaaaac atacgattta acggctagtg acattatccg
     1381 tcattacgat gtaaccggaa aaaattgtcc tgcgccttgg gttgcgaaac cttccgaatt
     1441 aacacgtttc agaaacgcag tcaatgcaaa attgaaaggt gcatcacaaa ataaaaacag
     1501 acatgatgga aaagtcgttg acagtgcgcc attgctcaca aaaatggatt ttaaatcgtc
     1561 gccattccgc atgtataaag cagggactga aattcttgtt tatgaacata atcaatattg
     1621 gtacaagact tatattgatg acaaactata ctacatgtat aagagctttt gtgatgttgt
     1681 agctaaaaaa gatgcgaaag gtcgcatcaa agttcgaatt aaaagcgcga aagaccttcg
     1741 tattccagtg tggaataaca caaaattgaa ttctgggaaa attaaatggt atgcacctaa
     1801 tacgaaatta gcatggtaca acaacgggaa aggttattta gaattgtggt acgaaaagga
     1861 cggttggtat tacactgcta actacttctt aaaataaaac tattgccctc gcgttttgcg
     1921 ggggtttttt gttttatatt gaaggggatt tttcataact tcgaattata agtacatacg
     1981 ttccacttcc tcatacttaa atagtataat ataatttaag ttaaaaagag gagaatttgg
     2041 gatg
//
LOCUS       DASDYO010000210         2029 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.212, whole genome shotgun sequence.
ACCESSION   DASDYO010000210 DASDYO010000000
VERSION     DASDYO010000210.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 2029)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 2029)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..2029
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.212"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(87..551)
                     /locus_tag="U0290_002930"
     CDS             complement(87..551)
                     /locus_tag="U0290_002930"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463854.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="superoxide dismutase"
                     /protein_id="HEM2302954.1"
                     /translation="MRKSRWLLILLLLIVLVALLACVDSGNGDVSGVPAKRGKQHFPP
                     TDTKKGWIELLATDGISSQGDLPCVYEEAESVEKLEVHMKELSTVSLTYVYIDGYIVQ
                     MEQGGGELSFQIQLSKAELKRGIHELTAVQYQENNPDTNKVELLKRANYEVK"
     gene            709..1482
                     /locus_tag="U0290_002931"
     CDS             709..1482
                     /locus_tag="U0290_002931"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734569.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="endonuclease/exonuclease/phosphatase family
                     protein"
                     /protein_id="HEM2302955.1"
                     /translation="MFSVTTFNIRFDDTSERKKSWELRKTLTKSLLDKYQWDFMGVEE
                     PLLPQMRDMKEMQDWDYFGVGRDDGFEKGEFTAVFYNSTRFTLLQEGHFWLSETPEVP
                     SIHSTAMFPRICVWGKLEDSTDGKQFYIFNTHLDHISEEARLFASQLLLHKASLIQED
                     LPVILLGDFNTEPSTPTYNLITQRYQDAQLLSKTPVKGPLGSFHDFQPLRPESELEKI
                     DYIFVSNEFHICSYETSTDEIDGCSASDHFPVMAVVGWT"
     gene            complement(1517..1909)
                     /locus_tag="U0290_002932"
     CDS             complement(1517..1909)
                     /locus_tag="U0290_002932"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463852.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="PH domain-containing protein"
                     /protein_id="HEM2302956.1"
                     /translation="MLDKLLGKAAVVTESSYGIERFLGEDETIIQIFKFVRDEVIITS
                     KGIFNVDAQGITGKKVEYKFFPKKALKYVSIETAGTLDRDFDLKIGVDGNTVVTQNTS
                     FSAPISLKVHKNDTEMGFALYKMIKEML"
BASE COUNT          640 a          404 c          312 g          673 t
ORIGIN      
        1 tttgtaagta ttaatagcac aaaaaaagaa tgtcattttt cacattctct ttaaaaatat
       61 ggttatgaat tgtttattag tcttttttat ttcacttcat aattagcacg ttttaaaagc
      121 tccactttgt ttgtatcagg attattttct tgatattgca cggccgttaa ttcgtgaatt
      181 cctcttttta attctgcttt acttaattga atttgaaagg aaagttcgcc gccaccttgt
      241 tccatttgga cgatgtagcc atcaatataa acataggtca aactcaccgt acttaattct
      301 ttcatatgaa cttccaattt ttctacagat tccgcctctt cataaacaca aggcagatca
      361 ccttgacttg aaattccatc cgtggcaaga agttctatcc atcctttttt cgtatcagtt
      421 ggagggaaat gctgttttcc ccttttagcc ggcacaccgg aaacatctcc attcccgctg
      481 tccacgcatg ctaataatgc cactaatact atcaatagta ataatatgag caaccatcga
      541 ctttttcgca acatagtgac actccctttt tacaacaata caatggtttt atttttccag
      601 aaaaaatgta gaatatatac tacataaaac ccaaatcagt gaaacgtttt cataaatatg
      661 ctaaactctc tttgtaaaac attccaatga aaagaaggat gtggaaaaat gttcagtgta
      721 actactttta acattcgttt tgatgatacc tctgagcgga aaaagagctg ggaattgcgt
      781 aaaacactaa caaaatcatt acttgataaa tatcaatggg atttcatggg agtggaggaa
      841 ccccttctgc cacaaatgcg cgacatgaaa gaaatgcaag attgggatta ttttggtgta
      901 ggacgagatg atggttttga aaaaggagaa tttactgctg ttttttataa ttctactcgt
      961 ttcaccttgt tgcaagaagg gcatttttgg ctttccgaaa cgcctgaggt tccttccatt
     1021 cactcaacag ccatgtttcc acgaatttgc gtttggggaa aactagaaga ttcaacggat
     1081 ggaaagcaat tttatatttt caatacacat ttagatcata tctctgaaga agctcggcta
     1141 ttcgcaagcc aacttttact acataaagcg agcttgattc aagaagattt accggtaatt
     1201 ttacttggag atttcaatac agagcctagt acaccgacgt acaacttaat aactcaaaga
     1261 tatcaggatg cgcagttact ttctaaaact cctgttaaag gaccccttgg tagttttcat
     1321 gattttcaac cactccgacc tgaaagcgag ctagaaaaaa ttgattacat ctttgtgtct
     1381 aatgagttcc acatctgctc ttacgaaact agcacagacg aaatagacgg ctgttctgct
     1441 tctgatcatt ttcctgtgat ggcagtagta ggatggacat aaaaaaagag aagacgatat
     1501 tcgtcttctc ttctactcat aacatttctt taatcatttt ataaagcgca aagcccattt
     1561 ccgtatcatt tttatgtact tttaaggaaa ttggtgcaga gaaagatgta ttttgtgtca
     1621 cgactgtatt gccgtcaacg ccaattttta agtcaaaatc acggtccaaa gttccagctg
     1681 tctcaataga aacatatttt aatgctttct tcgggaaaaa cttatattct actttctttc
     1741 cagttattcc ttgagcatcc acattaaaaa tccctttaga agtaataata acttcatctc
     1801 ttacaaactt aaaaatctga ataattgttt catcttctcc taaaaatctc tcaatgccat
     1861 aagaagattc ggtaactacg gcagcttttc ccaacaactt gtctaacatt taacccatcc
     1921 tttttattta cattatttta ttctacaaaa agcctctttc aatcaaaagt ctataacatt
     1981 agaaaaaaat aactcccccg cttaatttct tcccagtgag taaaatttt
//
LOCUS       DASDYO010000211         1953 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.213, whole genome shotgun sequence.
ACCESSION   DASDYO010000211 DASDYO010000000
VERSION     DASDYO010000211.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1953)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1953)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1953
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.213"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            89..739
                     /locus_tag="U0290_002933"
     CDS             89..739
                     /locus_tag="U0290_002933"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743336.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302957.1"
                     /translation="MNNRNWLKGLGVTMIAATLILTGCGNGDAEKTDTKEQTKSVEEE
                     GKKVKIESNEGKPQHEQLITVKLPPEADYLNDETLEVYEQDKKKYDQTEQLITNDSIT
                     LLIGDYGYYDPVQDAIECSAVIVNGTKTEIKDLSFQVSIENNVMQGRVFLDNSVPELT
                     KEQTGNFKPSMGIPVILGFPEEKPTDEIENGRKIDTKNIKINLSDIQYKVVEQEGK"
     gene            739..1053
                     /locus_tag="U0290_002934"
     CDS             739..1053
                     /locus_tag="U0290_002934"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724894.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="toxin B"
                     /protein_id="HEM2302958.1"
                     /translation="MGEEIKIDPHFLKKVENNVNSYIKAQKEVSIALLAVRNNLASNF
                     SGVACNEIKNYITELMNDLEKEFGVFITKNHEKVKALEESYKELDSQLGQTFNYGMER
                     TK"
     gene            1340..1615
                     /locus_tag="U0290_002935"
     CDS             1340..1615
                     /locus_tag="U0290_002935"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724901.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302959.1"
                     /translation="MKKIKDECYLILSLIEKSNLKETDYYSIVRIKRALTKLLDEINS
                     NDIEKMNINFLSLARNFVDDTGDYSNDILKELENLSKDVEKLKLTRR"
     gene            1620..>1953
                     /locus_tag="U0290_002936"
     CDS             1620..>1953
                     /locus_tag="U0290_002936"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724902.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="SseB family protein"
                     /protein_id="HEM2302960.1"
                     /translation="MNEQILLKNDDLLNIIKVLKTNYSKQVEEELYRQMQKSKLLLPA
                     IIREENKISIVKIIDEKENEYLPVFTDWTNFQLYLDSTKESQPIVFTFNEYFNILVAD
                     LNLSGIVIN"
BASE COUNT          827 a          196 c          384 g          546 t
ORIGIN      
        1 agtgagattt tctaaagtat tgaagggaag cacgaattaa cagtatcaaa attaatagaa
       61 taagacataa aaaataagag gttacaacat gaataataga aattggttaa aaggattagg
      121 agtaacaatg attgccgcca ctttaatttt aacgggatgc ggaaatggag acgctgaaaa
      181 gacagataca aaggaacaga ctaaaagtgt tgaagaagaa ggaaaaaaag taaagattga
      241 gagtaatgaa gggaaaccac agcatgaaca gcttataaca gtgaagttgc cgccagaagc
      301 agattattta aatgatgaaa cgttagaagt gtatgagcaa gataaaaaga agtatgacca
      361 gacagagcaa ctaattacta atgattcaat cacattacta atcggagact atggatatta
      421 tgatcctgtg caggatgcta tagaatgttc tgctgtaatc gtaaatggta caaaaacaga
      481 aattaaagat cttagttttc aagttagtat tgagaacaat gtaatgcaag gtagggtatt
      541 tttggacaat tcagtaccgg aacttacaaa agaacaaaca ggaaatttta agcctagtat
      601 gggtataccg gtaattttag ggtttccaga agaaaaaccg acagatgaaa tcgaaaatgg
      661 tagaaaaatc gacactaaaa acataaaaat taatttaagt gatattcaat ataaggttgt
      721 agaacaggag gggaaatgat gggagaggaa attaaaatag atcctcattt tttgaaaaag
      781 gtggagaata atgtaaatag ttacattaag gctcaaaaag aagtttctat tgcattacta
      841 gcagttagaa acaacttagc gagtaatttt tcaggtgttg cttgcaatga aataaaaaat
      901 tatataacag aattaatgaa tgatttagaa aaagaatttg gtgtcttcat tacaaagaat
      961 catgaaaaag ttaaggcgtt agaggaaagt tataaagaac ttgatagtca gttaggacag
     1021 acctttaatt atggaatgga gagaacaaaa tgagtagaaa aatacatcta aaaacttttt
     1081 aaaagaaagc ggaataaaaa catggctgat ttaaagggag tatagcaaat cctcaataag
     1141 gagcaattgt aaaggttttt gatgcagttg gaggaaaaca aatccagttt gacacctcag
     1201 tgagatgata tgagaaatta cacttgttaa gtgggataaa ataagtgtct aaatctctaa
     1261 aagaaaaaat attatcgaga aaacgattta tttcctagga ttagaagatt taagatattc
     1321 cttataaata ggaggatata tgaaaaaaat aaaagatgag tgttacttaa ttttaagctt
     1381 aatagaaaaa agtaatttaa aagagacgga ttattacagt attgttcgta ttaaaagagc
     1441 acttactaaa ttattagatg aaattaatag taatgatatt gaaaaaatga atattaattt
     1501 tctgagttta gcaagaaatt ttgtggacga cacgggagat tattctaatg atattttaaa
     1561 agagttggaa aatctatcaa aggacgttga gaagttgaaa ttaacacgga ggtagaaata
     1621 tgaatgaaca aatattgttg aagaacgatg atttattaaa tataatcaaa gttttaaaaa
     1681 cgaattactc aaaacaagta gaagaagagt tgtataggca aatgcagaaa agcaaattgt
     1741 tattaccagc tataataaga gaagagaata agatatctat tgtaaagata atagatgaga
     1801 aagaaaatga gtatttgcca gtatttacag actggacaaa ttttcaattg tatcttgata
     1861 gtacaaaaga atctcaacct attgttttta catttaacga atattttaat atccttgttg
     1921 ctgatttgaa tttatctgga attgttatca atc
//
LOCUS       DASDYO010000212         1828 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.214, whole genome shotgun sequence.
ACCESSION   DASDYO010000212 DASDYO010000000
VERSION     DASDYO010000212.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1828)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1828)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1828
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.214"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(264..710)
                     /gene="perR"
                     /locus_tag="U0290_002937"
     CDS             complement(264..710)
                     /gene="perR"
                     /locus_tag="U0290_002937"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="peroxide-responsive transcriptional repressor
                     PerR"
                     /protein_id="HEM2302961.1"
                     /translation="MAVSNATLKEAVDVLKKTGVRITPQRHAILEFLINSHTHPTADD
                     IYRALEGNFPNMSVATVYNNLRVFRDAGLIKELSYGDASSRFDFSTSNHYHAICNVCG
                     KIVDFQYPGLDEVEHFAAHMTGYEIDNHRLEVYGICPACKEKQSNN"
     gene            complement(793..1734)
                     /locus_tag="U0290_002938"
     CDS             complement(793..1734)
                     /locus_tag="U0290_002938"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465209.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="dehydrogenase"
                     /protein_id="HEM2302962.1"
                     /translation="MNILFTLDVPEHLQTLQAEKFPEDTFYYESNDHFANLAEIDIIV
                     TYGSNITEAKIKQASNLKFIMVFSAGVDSLPREIIQERKIKVANVRGIHAVPMGEYAL
                     SFMLSHVKKATFFYQMQKEKNWASEEPITELAGKTLVVAGTGAIGAKVAEFAQAFDME
                     IIGVNTTGHPVKPFSKTYAMSDIEKVAPLADFFVSVLPHTDKTTAIYSLSFFRKMKDN
                     AVFINIGRGSAVELKVLEQASKEQLINHFYLDVVPEEPLSEDNYLWEASNVTITPHVS
                     GHSDKYLERSFKIWFENIKHLKENTKLRNEIDLNKGY"
BASE COUNT          553 a          334 c          280 g          661 t
ORIGIN      
        1 ttagtcgctt tcatgcttgt tatgcgaatg ttttcgtttg ttttttgcga cttttaaatc
       61 atatcatttc agcaactatc tgtcaacaac tttttgaatt tattttatga ataaaattca
      121 tttaaatcgc tgctatcgta gcgccgaaaa ctaatatatc aagttttgag atatatgtca
      181 accgaattat gcataaaatt aaataaaaat gaaaaaaatt gcaaaaaaca caaaaaaaca
      241 cctagctagg ctaagtgttt tgattaatta tttgattgtt tttctttaca ggctggacat
      301 ataccatata cttccagtct gtgattatct atttcatatc cggtcatatg tgctgcgaaa
      361 tgttctactt catctaaacc tggatattga aaatcaacta tttttccaca cacattacaa
      421 attgcgtggt aatgattaga tgtagaaaaa tcaaatcgac tagatgcatc gccataggat
      481 aattctttaa ttagaccagc atcccggaaa acgcgtaaat tattatatac agttgctacg
      541 ctcatgttag ggaagtttcc ttctaaagcc cgataaatat catccgcggt tgggtgtgta
      601 tgtgagttaa ttaagaattc aagtatagca tgacgctgag gagtgattct tactcctgtt
      661 ttctttaaga catctactgc ctcttttaga gttgcattag acaccgccat gcactccctt
      721 ccaaaaataa ttattatctt tataataccg gaaataacgc ttaactgtca atagaatggc
      781 agaatttata gcttaataac ctttattcaa atcaatttca ttccgtaatt tggtattttc
      841 ttttagatgt ttgatatttt caaaccaaat cttaaagcta cgttctaaat atttatccga
      901 atgtccagat acatgaggtg tgatagtaac gttacttgct tcccataaat aattgtcttc
      961 ggaaagtggc tcttcaggta caacatctaa ataaaaatgg tttattaatt gctcttttga
     1021 tgcttgttct aaaaccttta attcaactgc gctacctctt cctatattga taaaaactgc
     1081 attatctttc attttccgga aaaatgataa ggaataaata gctgttgttt tgtctgtatg
     1141 aggtaaaaca ctaacaaaaa aatctgctaa tggagccact ttttcgatat cggacatggc
     1201 atatgtttta ctaaagggct tcacaggatg tccagttgta ttaacaccta taatttccat
     1261 atcaaatgct tgagcgaact cggccacttt tgctccaatg gctccagttc cagctactac
     1321 caaagttttt ccagctaact ctgttattgg ttcttcactt gcccaatttt tttctttttg
     1381 catttgatag aagaaagtgg ctttttttac gtgtgataac atgaaagata gcgcgtattc
     1441 tcccattggc acagcgtgga ttccgcgtac attagcaact ttaatttttc tttcttgaat
     1501 tatttccctc ggcaaactat ctactcccgc agaaaaaacc atgataaatt ttaaattgct
     1561 tgcttgttta attttggctt cagtaatgtt agatccgtat gtgacgatga tatctatctc
     1621 cgctaaattg gcaaaatgat cattgctctc ataataaaaa gtatcctctg gaaatttctc
     1681 tgcttgcaaa gtctgtaaat gttctgggac atctaatgta aataaaatgt tcattttgcg
     1741 ccacacttcc tctctttagc tatatactaa ttttatgctt tttttcattt aacggcaatt
     1801 aaattgtttt ttcgattgcg gcatctta
//
LOCUS       DASDYO010000213         1811 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.215, whole genome shotgun sequence.
ACCESSION   DASDYO010000213 DASDYO010000000
VERSION     DASDYO010000213.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1811)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1811)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1811
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.215"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            200..820
                     /locus_tag="U0290_002939"
     CDS             200..820
                     /locus_tag="U0290_002939"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF47 domain-containing protein"
                     /protein_id="HEM2302963.1"
                     /translation="MAFKNKKDRFASLLHDIAVNLHEGANFFATYNINSVEDLHTFSN
                     KIKEYETAGDSMVHKMIMELNDAFITPIEREDMLELTNRLDDVMDALDETAFSLEICQ
                     ITHYDEYMTKFIQAIQASTVEIEKAVDLVFDKKLKDVRKLAIQIKDYESQCDDVYRES
                     LIQLFQNEKDPIKLIRLREVYEKLEDIADSCQSVANTLESIVMKNA"
     gene            834..>1811
                     /locus_tag="U0290_002940"
     CDS             834..>1811
                     /locus_tag="U0290_002940"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465773.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="inorganic phosphate transporter"
                     /protein_id="HEM2302964.1"
                     /translation="MEGMFLITLVIVLAALAFDLINGFHDTANAIATSVSTKALKPRH
                     AIILAAVMNFVGAISFTGVAKTITKDIVNPFDLDHGELVILAALLSAIAWNLITWYFG
                     IPSSSSHALIGSIAGAAIASAGFAAIEYSGFTKIIVGLLVSPVLAFVVGYTIYSLFKV
                     FLKNLNLATTNRRFRMIQVGTAALQSYTHGTNDAQKSMGIITMALIASGFQTTDDVQL
                     WVQVSCAIAMAIGTSIGGWKIIKTVGGKIMKIKPVNGVAADLSSVIIIFGATFIHLPV
                     STTHVISSSILGVGTAHRVKGVKWDTAQRMIITWVITLPISATIAALIFY"
BASE COUNT          565 a          348 c          338 g          560 t
ORIGIN      
        1 ctgtcagaac gtttatttgc agagccgtca aaaaaaagtt tcctatttat tcccatccta
       61 tgttagtatt aatttgtggt aaagatctat caagtttttt atttgttttc gttaacttat
      121 cgttaagaaa aaagctccct tttcaaagta aaagcgagct gattattaat gaccaaaaat
      181 gatcggggga attaagaaaa tggcttttaa aaataaaaaa gaccgttttg cttcgttgtt
      241 gcatgacatt gcagtaaatt tacatgaagg tgcaaatttc tttgcaactt acaacattaa
      301 ttcggtggag gatttacata ctttctcgaa taaaatcaaa gaatatgaaa cagctggaga
      361 ctccatggtt cacaaaatga ttatggaatt aaacgacgct ttcattacac caatcgaacg
      421 tgaggacatg ttagaactta ctaaccgctt agacgacgta atggatgcac ttgatgaaac
      481 agctttctca ctagaaatct gccaaatcac tcattatgat gaatacatga ctaaatttat
      541 ccaagctatt caagcaagca ctgttgaaat tgaaaaagca gttgaccttg tttttgataa
      601 aaaactaaaa gacgttcgta aacttgcgat tcaaattaaa gattacgaat ctcaatgtga
      661 tgatgtttac cgcgaatcac taatccaact tttccaaaac gaaaaagatc caattaaact
      721 aattcgccta agagaagttt atgaaaaatt agaagacatt gctgatagtt gtcaaagcgt
      781 tgcgaatacg cttgaatcaa ttgtcatgaa aaatgcgtaa ggggcctaga tagatggaag
      841 gaatgtttct catcaccctc gtcatcgtac ttgccgcgct agcatttgac ctgatcaatg
      901 ggtttcatga tacagctaac gcaattgcga ctagtgtctc tacaaaagcc ttaaaaccac
      961 gacatgcgat tattcttgct gccgtaatga actttgtggg tgctatttca ttcacagggg
     1021 ttgctaaaac aattacaaaa gacattgtta acccattcga cttagatcac ggcgaacttg
     1081 ttattttagc agcattactt tcagctattg cttggaactt aatcacttgg tatttcggaa
     1141 ttcctagtag ttcctcccat gccttgattg gatccatcgc cggtgcagcc attgcatcag
     1201 ccggatttgc agcaattgaa tacagcggat ttactaaaat cattgttggt ttattagtat
     1261 ctcctgtact tgctttcgta gtcggttaca cgatatattc actcttcaag gttttcctga
     1321 agaacttaaa cttagccacg accaatcggc gcttccggat gattcaagtc ggaactgctg
     1381 cgctacaatc ttacacacac ggaactaatg atgcacaaaa atcaatgggg attatcacaa
     1441 tggcattaat tgctagtggt ttccaaacaa ccgatgatgt gcaattatgg gttcaagtat
     1501 cctgtgcgat tgccatggcg attggtacga gtattggtgg ttggaaaatc atcaaaactg
     1561 ttggcggtaa aatcatgaaa atcaaaccag ttaatggtgt agcggctgat ttaagttccg
     1621 ttatcattat tttcggtgct actttcattc atttaccagt tagtacaaca cacgtaatca
     1681 gctcttctat ccttggtgtt ggaacagctc accgtgtcaa aggtgtcaaa tgggatactg
     1741 cccaacgtat gattattact tgggttatca cacttcctat ttcagcaaca attgcagcac
     1801 ttatcttcta t
//
LOCUS       DASDYO010000214         1760 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.216, whole genome shotgun sequence.
ACCESSION   DASDYO010000214 DASDYO010000000
VERSION     DASDYO010000214.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.216"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            1062..1691
                     /locus_tag="U0290_002941"
     CDS             1062..1691
                     /locus_tag="U0290_002941"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464165.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302965.1"
                     /translation="MKNKTTKKIICGGLATVLLSSSLALPTTALASTSEQMVQDYQQE
                     ETFSESALTELDNLTAGKYITFDSSLKQYKVNSTIGSEMTPEKIEAVNKQVAETNNLL
                     ALAKKDSSTNIIAVTPKGEETVVKRGLLKGAGVNRVTYHWNYARIRLSKNTVRTMGAG
                     LSIAGIWLPLKVVSKVCASLGVGTGFVKHGIWFDYNYFSNLLLTGYGWQ"
BASE COUNT          635 a          225 c          314 g          586 t
ORIGIN      
        1 aaatagatga tagaaatacc gcaattgaat cattaaatag cttacaagaa tatttaacta
       61 ttaaattcac aatggaacat ccaattttct cttcagttga aacatcatat aaggattcac
      121 aaaataaaga tttaattcaa gttgtagact tattcgctaa cacagttttt agagtatgta
      181 gaaaccacgt atcagcacat aaaactgata agagaaatag agaacttttg agtttatgta
      241 atattggttg tgaccattat tttccgcgac atatttgtga tctagatatt tgctataaat
      301 aaaatgcttg aaatgcttgc taacttgttt gatttttgtt attcttgatt aagaagttag
      361 ataataattc tttgagtgtc gcataaatga ttagtcaagg ctagtcataa cttgtaagct
      421 gcctgttgag gtagtcgcct taaagttgtc aacttctatt ttttatatat gtcagtccct
      481 aacctcgccg ttagggcttt ttttatgcaa aaaaataccc tgaacaaaga gttcaaggtt
      541 gcagtcatat aaaaccgcta atagttgaat gaaattacta ggtacaaaaa gcacctatta
      601 gattattatt acacagattt attaagagtc aataattttt agacttattg aataattata
      661 ctgttttatt agctagggta ttataaaata tgataaatat ttaaataaat aaggtgtttt
      721 tatatgaaaa aaagcttgta ttatgagtga atatgtattt tttgtgtcaa aaagaaattg
      781 aaatgcataa ataatgaata ataactcgtg ttgtgtaata ttttgtgact aaaaacacaa
      841 tgttactcaa attgtgtaag aataaatcta aataagcctc atttttagtc gttcacgata
      901 agaatcggac atttcattac atttttggtt atacatgaac gaggcatgtt agagtatttg
      961 taaggaggtt gtatagaaaa ttctaatact tatgcttaat tattagttag taacttttgt
     1021 tagttcaaaa caaattcaga cataaaagga gcaaaaagat gatgaaaaat aaaacaacta
     1081 aaaaaattat ttgtgggggg ttagctactg tacttttatc tagttcattg gcattaccaa
     1141 caactgcttt agcatcaaca tctgaacaaa tggttcagga ttatcaacaa gaggaaactt
     1201 tttcagagtc agctttaaca gaattagata atcttactgc aggaaaatat ataacttttg
     1261 acagttcact aaaacaatat aaagtaaatt ctactattgg tagtgaaatg acaccagaaa
     1321 aaatagaggc ggttaacaaa caagtggctg agacaaataa tctacttgct ttagctaaaa
     1381 aggactcaag taccaatata attgctgtaa ctcctaaagg tgaggagaca gtggttaaaa
     1441 gaggtttgtt aaaaggagca ggagtgaata gagttacata ccactggaat tacgctcgta
     1501 taagattgtc aaaaaataca gtaagaacaa tgggtgcggg tttaagtata gctgggatct
     1561 ggttgccgct gaaagtagta tcaaaagttt gtgcttcttt gggtgtaggt acaggttttg
     1621 ttaaacacgg aatttggttt gattataatt atttttctaa cctacttctt actggctatg
     1681 ggtggcagta actttaactt ggaggaattc taaatgcgag gaacacgttg gttttatatc
     1741 agagcgctta ttgtaacaat
//
LOCUS       DASDYO010000215         1760 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.217, whole genome shotgun sequence.
ACCESSION   DASDYO010000215 DASDYO010000000
VERSION     DASDYO010000215.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1760)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1760)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1760
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.217"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..224
                     /locus_tag="U0290_002942"
     CDS             <1..224
                     /locus_tag="U0290_002942"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464003.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302966.1"
                     /translation="STLIVWTIVCIYMSISMVSNNTGIAFPIWLHIILLICFLATGIV
                     NVKKKEYLWSTMLFEGVLVVLLSLIIVLV"
     gene            complement(307..1284)
                     /locus_tag="U0290_002943"
     CDS             complement(307..1284)
                     /locus_tag="U0290_002943"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464004.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HD domain-containing protein"
                     /protein_id="HEM2302967.1"
                     /translation="MKMTDPLYGTFEIEPVLAELIQSPLVSRLAHVHQGGASYLVNPL
                     WDLSRLDHSIGVMLFIRKFGGSLEEQIAGLLHDVSHTAFSHVVDYALDFEEEDYHEQI
                     FEDFVKTSTIPAILEKYGYSFEGIFEDISKWKILEQEAPELCADRIDYTLQDLYRHRK
                     ISLAEVEGFLQALVMVNGRLYLANISSAEWFVKQYYSEVIDYFYDPLNVYSYEILAEA
                     MRIAFQQETITTDDLRLTDAELLAKLNANSDAREKIQLLASVHLEENEVDFTYHHKKK
                     MRLINPSVLVDGRLIPADELSEKVREMNDWASERSKHGIYIKATKKSKQ"
     gene            1388..1693
                     /locus_tag="U0290_002944"
     CDS             1388..1693
                     /locus_tag="U0290_002944"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010958746.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302968.1"
                     /translation="MAEDAIDKMKTNSGSVIIPDETSVVAKIFRDKIDLVANAIGTSI
                     YQIKRDEALQDAEQKAREQPTLAGSVTDSIEVVEEIPLVHHLANAPRLRMKVVGNLV"
BASE COUNT          557 a          387 c          306 g          510 t
ORIGIN      
        1 caagtacatt aatcgtttgg acaatagtat gcatttacat gagtatttct atggttagta
       61 ataatactgg cattgctttt ccaatttggc ttcacatcat tcttttaatc tgcttcttag
      121 cgacaggtat agtaaatgtg aagaaaaaag aatatctttg gagcactatg ttatttgaag
      181 gcgtgttagt agttctatta agtttaatta ttgtattagt ctaacggatg taaatatatg
      241 aatagatgga tgttccaaac taaataggag tattgttaac tcaaacctct caagtaagca
      301 gtgtcactac tgcttacttt ttttggttgc ttttatgtag atgccgtgct tacttctctc
      361 agatgcccaa tcattcattt cacgtacttt ttctgaaagc tcatccgccg gaataagccg
      421 cccatccacc aaaacagacg gattaatcaa acgcattttc ttcttatgat gataagtaaa
      481 gtccacctca ttttcttcta aatgcacact cgcgagcaac tggattttct cccgagcatc
      541 tgaattcgca ttcaatttag ccaataattc agcatcagtc aaccgaagat catcggtcgt
      601 aatcgtctcc tgctgaaacg caatgcgcat tgcttcagcc aaaatctcat aactataaac
      661 attcagcgga tcataaaaat aatcaatcac ctctgaataa tattgcttaa caaaccattc
      721 agcggacgag atattcgcca agtaaagccg cccattcacc attactaaag cctgcaaaaa
      781 tccctccacc tcagccaaac taattttcct atgtcgatac aaatcttgca acgtataatc
      841 aatccggtca gcacaaagct ccggggcttc ttgctccaaa attttccact tcgaaatatc
      901 ctcaaaaatc ccttcaaaag aataaccata cttctctaaa atggcaggaa tcgtcgaagt
      961 ttttacaaaa tcctcaaaaa tctgctcatg ataatcttcc tcttcaaaat caagcgcata
     1021 atccaccaca tgtgaaaaag cagtgtgcga tacgtcgtgc agtaagccag caatttgctc
     1081 ctccaaagag ccaccgaact tcctaataaa aagcatcacg ccaatcgaat gatcaagccg
     1141 gctaaggtcc caaagcggat ttactaaata actcgcgcca ccttgatgca cgtgtgctag
     1201 ccgtgaaacc aatgggcttt ggattagttc agccaaaaca ggttctattt caaatgttcc
     1261 gtagagcggg tctgtcattt tcatcatatt cacctctttt ttaattatat attagcgaac
     1321 aaacgttttc catattttcc ctagcaattc caattttgct gagacagttt ataaaaaaat
     1381 tactgaaatg gccgaagatg cgattgataa aatgaaaacc aattcgggta gtgtaattat
     1441 tccagacgaa acctctgttg ttgcaaaaat tttccgcgat aaaatcgacc tagttgccaa
     1501 cgcaatcggc acatctattt accaaatcaa gcgggatgaa gcgctgcaag atgccgagca
     1561 aaaagcgaga gaacaaccaa ccttagccgg ctcagtgact gactcgattg aagtagtgga
     1621 agaaatccca ttggtgcatc atctggctaa tgcgcccaga ttgcgcatga aagttgtggg
     1681 gaatttggtt taagggaagt aaatagtgga gcattccggt cattttttat aaagtaatcc
     1741 tacgtgttat aaaaatacgg
//
LOCUS       DASDYO010000216         1667 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.218, whole genome shotgun sequence.
ACCESSION   DASDYO010000216 DASDYO010000000
VERSION     DASDYO010000216.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1667)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1667)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1667
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.218"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..693
                     /locus_tag="U0290_002945"
     CDS             <1..693
                     /locus_tag="U0290_002945"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464599.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302969.1"
                     /translation="AWQILNPLIQIAIYYFVFGFGMNAKSGSDASYIEWMLAGIIPWF
                     FISAVILQGANSIYNKIGMVSKMNFPMSILPNITIVSNLTSYFTMMVILLGLLAINGT
                     PITIYWGQYLYYFVAMIAFLFSVTLFNATISVLVRDYYIMLQSVMRVLFYVTGIVWNL
                     ETMLPQWLVDLLKLNPIYYVVNGFRETFLMNKGFWESPSYTMYFWLITLTLLFVGATL
                     HMKFRERFVDYL"
     gene            706..>1667
                     /gene="tagH"
                     /locus_tag="U0290_002946"
     CDS             706..>1667
                     /gene="tagH"
                     /locus_tag="U0290_002946"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464600.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="teichoic acids export ABC transporter
                     ATP-binding subunit TagH"
                     /protein_id="HEM2302970.1"
                     /translation="MGKNIKVSFKHVSKEYDLYQNKSDKIKGLFMPKSQKMQSFWALR
                     DVSFDIHDGETVGLIGINGSGKSTISSIMSGVIPPTQGEVIINGETSLIAIAVGLKGP
                     LTGYENIRLKLLMHGMKSSQINKLMPSIIEFADIGDFINQPIKNYSSGMRSRLGFAIS
                     VHTNPDILVIDEALSVGDQTFYEKCVDKINEFKARGKTIVFVSHSLGQVKSLCDRIIW
                     MHHGEIREMGTAQEVAQKYDEFVKWFNKQPNDYKKKYQKEHKENQKAPQKKIYPNPNA
                     NKYRLTLFDKIFLTVLIALTILFGTLVATGKSFKGLISEESTTQ"
BASE COUNT          549 a          245 c          323 g          550 t
ORIGIN      
        1 gcatggcaga ttttaaatcc attaatacaa attgctattt attattttgt gtttggattt
       61 gggatgaatg caaaatctgg atcggatgca agttatattg aatggatgct agcggggatt
      121 attccttggt tctttattag tgcagttatt ttgcaaggtg cgaatagtat ttataataaa
      181 ataggcatgg tttcaaaaat gaatttccca atgagtattt tacctaatat cacgattgtc
      241 tctaatttaa caagttattt tactatgatg gtaattttgc taggcttgct cgcaattaat
      301 ggaactccta ttacaatcta ttggggtcag tacttgtatt attttgtagc catgattgct
      361 tttctcttca gtgttacttt atttaatgca acaattagcg ttttagtaag agactattat
      421 attatgctgc aatctgtcat gcgtgtactt ttttacgtaa cagggattgt ttggaattta
      481 gaaacaatgt tgccgcaatg gctagtagat ttactcaaac taaatccgat ttactatgtg
      541 gtaaacggct ttagagagac attcttaatg aataaaggct tctgggaatc tccatcatac
      601 acgatgtatt tctggttaat cacgctaaca ttactatttg ttggtgcgac actacacatg
      661 aaattccgcg aacgcttcgt ggattattta taggaggtta gacagatggg taaaaatata
      721 aaagtatcat ttaaacatgt gtcgaaagaa tatgacctct atcaaaataa atctgataag
      781 atcaaaggct tgttcatgcc gaaaagtcaa aaaatgcaat ccttttgggc gttgcgagac
      841 gtatcttttg atattcatga tggtgaaaca gtaggactta ttgggatcaa tggttctggt
      901 aagtcaacta tatcgagtat tatgtcaggt gttattcctc cgacacaagg agaagtcatt
      961 atcaacggag aaacttcttt aattgccatt gcagtgggac taaaaggtcc gctgacgggt
     1021 tatgaaaata ttcgcttgaa attactcatg catggaatga aaagttctca aattaacaag
     1081 ttgatgccaa gtattatcga attcgctgat ataggtgatt ttattaatca accaattaaa
     1141 aactattcaa gcgggatgcg ttctcgttta ggttttgcaa tttcggtgca taccaatcct
     1201 gatattttag ttattgatga agccttatca gtgggtgacc agacttttta tgagaaatgc
     1261 gttgataaga ttaatgaatt taaagcgcgt ggcaaaacta ttgtttttgt cagtcactca
     1321 cttggacaag taaaaagttt gtgtgacaga attatttgga tgcatcacgg tgaaataaga
     1381 gagatgggta cagcacaaga agttgctcaa aaatatgatg agtttgtaaa atggtttaac
     1441 aaacaaccaa atgattataa gaaaaaatat caaaaagagc ataaggaaaa tcaaaaagct
     1501 cctcagaaaa aaatctatcc taatcctaat gccaataaat acaggctaac tctttttgat
     1561 aaaatatttt taactgtgct aattgcatta acgatactat ttggaacact agtggcgaca
     1621 gggaaatctt ttaaaggctt aattagtgaa gaatccacaa cacaaat
//
LOCUS       DASDYO010000217         1629 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.219, whole genome shotgun sequence.
ACCESSION   DASDYO010000217 DASDYO010000000
VERSION     DASDYO010000217.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1629)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1629)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1629
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.219"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(159..716)
                     /gene="frr"
                     /locus_tag="U0290_002947"
     CDS             complement(159..716)
                     /gene="frr"
                     /locus_tag="U0290_002947"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464839.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ribosome recycling factor"
                     /protein_id="HEM2302971.1"
                     /translation="MSKEVLSKSKEKMEKAEQALTRQLGTIRAGRANASLLDRLSVDY
                     YGAATPVNQMASISVPEARMLLITPYDKTILGEIEKAILKSDLGLTPNNDGSVLRLSI
                     PQLTEERRKELVKEVKKEAEEAKVAVRNIRREANEELKKLEKNGDITEDDLRSYGEDV
                     QKLTDESIKNIDSITKDKEAEILEV"
     gene            complement(716..1444)
                     /locus_tag="U0290_002948"
     CDS             complement(716..1444)
                     /locus_tag="U0290_002948"
                     /EC_number="2.7.4.22"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UMP kinase"
                     /protein_id="HEM2302972.1"
                     /translation="MDTPDYKRVVLKLSGEALAGNDGFGINPSVVNLISAQIKEVVEL
                     GVEVAIVVGGGNIWRGKLGSEMGMDRAAADQMGMLATIMNSLSLQDSLENIGVATRVQ
                     TSIDMRQIAEPYIRRKAIRHLEKGRVVIFAGGTGNPYFSTDTAAALRAAEIEADVILM
                     AKNNVDGVYNADPKLDENAKKYEELSYLDVIKEGLEVMDTTASSLSMDNDIPLIVFSF
                     TEQGNNIKRVILGEKIGTTVRGKK"
BASE COUNT          455 a          349 c          253 g          572 t
ORIGIN      
        1 tactaaaaat tccatgtgaa cagatgagag tttcatgaga gcgatggaat tgcccattaa
       61 aaaacattcc taacccaaca catatggaaa gaattaggaa tgtcgcttca acttaaaagg
      121 tgtttaaccc tatttgttac tatttgtaaa agtatcaatt aaacttctaa gatttccgct
      181 tctttgtctt tcgtgatgct atcgatgttc ttgatgcttt catctgttaa tttttgaacg
      241 tcttcaccat aagaacgcaa atcatcttct gtgatgtcgc catttttttc tagttttttc
      301 aattcttcat tagcttcacg acgaatgtta cggacagcaa ctttcgcttc ttcagcttct
      361 tttttcactt ctttaaccaa ctctttacga cgttcttccg ttaattgtgg aatagataaa
      421 cgtagtacag aaccatcatt atttggagtc aaacctaaat ccgatttcaa aattgctttt
      481 tcaatttcac ctaaaatagt tttatcgtaa ggtgtaatta gtaacattct agcttcagga
      541 acgctgatag aagccatttg gttcactgga gtagctgctc cgtaataatc tacagataaa
      601 cggtcaagta gtgatgcatt cgcacgacca gcgcggattg tacctaattg tcttgttaat
      661 gcttgttctg ctttttccat tttttctttg gatttcgata atacttcttt actcattatt
      721 ttttccccct aacagtagtc ccgatttttt cacctaaaat aacacgttta atattattgc
      781 cttgttctgt aaacgagaag acgattaatg gaatatcgtt gtccatactt agagaggacg
      841 cagttgtatc cataacttcc aatccttctt taatcacatc aaggtaagat aactcttcgt
      901 attttttcgc attttcatct agttttggat cagcattgta gacaccatct acattatttt
      961 tcgccattaa gataacatct gcttcgattt cagccgctct aagtgctgcc gctgtatctg
     1021 tggagaagta tgggttacct gttccacctg caaaaataac gacgcgacct ttttcaaggt
     1081 ggcgaatcgc ttttcgacga atgtacggct cagcaatttg acgcatgtca atggaagttt
     1141 gtacacgcgt tgctactcca atgttttcaa gggaatcttg taaagacaag gaattcatga
     1201 tagtcgcaag catacccatt tggtcggccg ctgcacggtc cattcccatt tcactaccaa
     1261 gtttaccgcg ccagatattc ccgccgccaa caacgatagc tacctctact cctagttcta
     1321 ctacttcttt gatttgagca gaaatcaaat tgaccacgct cggattaatt ccaaagccat
     1381 catttccggc aagtgcttca ccgcttaatt ttaatacaac tcgtttataa tctggggtat
     1441 ccataatagc ctccattttc atattctatt catagataga agagttttcc atccaccatt
     1501 atctattcta ctaaaaagct ggctattaca aaagtgtttt ctaccaaaaa ataaaaaaac
     1561 atttaaattt actcctagtc ttcctttttt tatgcgtaat ttttattatt tataataatt
     1621 tttccatcc
//
LOCUS       DASDYO010000218         1604 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.220, whole genome shotgun sequence.
ACCESSION   DASDYO010000218 DASDYO010000000
VERSION     DASDYO010000218.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1604)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1604)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1604
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.220"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            282..899
                     /locus_tag="U0290_002949"
     CDS             282..899
                     /locus_tag="U0290_002949"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734772.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302973.1"
                     /translation="MLMSLSVLPLATYASETENTPTESYDGENFIATQIGNTLVIEDK
                     KTGETVKIEMNDEENGVITSDDGTIENVHRDEEGNVYVDNELELEAPPLDIEDGINIA
                     TQPRLLKASKWIYVQTTKYNTTTQGNMRSLALGILSFMPITGPIFGIVAIIDAARSMG
                     AKTLYVRVKQYRTSGYQFYKYDSYYYANASLTKLVKKTSQTKRMW"
     gene            1209..1553
                     /locus_tag="U0290_002950"
     CDS             1209..1553
                     /locus_tag="U0290_002950"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464002.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302974.1"
                     /translation="MQKDTYNGIRLSVIQLIDSKKENLKENNIKLTIIKNEKDGYVVE
                     LDNDKCMAEIVVEEPTYAPYRYISFEVVSLMDGKVKIIYSWYDDETSQWSDIEKELNK
                     GIQFLNNFKTME"
BASE COUNT          592 a          201 c          312 g          499 t
ORIGIN      
        1 caaaagtatt gtagcgtggg atgtcgcgct tttaggtaaa ggagatggat aaaatgaaaa
       61 aaattattat tggtgtgttt ttcgggattc ttattctagt tattgttggt ctatatgttt
      121 catatgtcta tatgaatcaa agctttatat gggttgcagg gatacttttg ttgttaggta
      181 cattattcaa ttggtttttg tataataagt atctgtctaa aaaaacataa taagggagcg
      241 agataaccat gaaaaaaatc attatagtac tagcatcagt tatgttaatg tctctttcgg
      301 ttctgccact ggcaacttat gcatcagaaa cagagaacac tcctactgaa tcatatgacg
      361 gagaaaattt tatagcaact caaataggta atactttagt tattgaagat aagaagacgg
      421 gcgaaactgt aaaaattgaa atgaatgacg aagaaaacgg ggtaattaca tctgatgatg
      481 gtacaataga aaatgtacat agggatgaag aaggtaacgt ttatgtagat aatgagcttg
      541 aactagaagc acctccttta gacattgaag atggcataaa tatcgccact cagcctcggt
      601 tactgaaagc ttctaaatgg atatatgttc aaacaactaa gtataataca accacacaag
      661 gcaatatgag aagtcttgca ttggggattc tatcattcat gccaattaca ggtccaatct
      721 ttggaatagt tgcaattatt gatgctgctc gatcaatggg ggcgaaaaca ttatatgtta
      781 gagtgaaaca atatcgtact agtggttatc aattttataa gtatgattct tattattatg
      841 ccaatgctag tttaactaag ctagttaaaa aaacatccca gactaaacga atgtggtagg
      901 gcattattaa aaaaactagt ataaactaaa agaccttgct caaagattag caaggtctta
      961 gactggggaa gaaaaagtct tctctttttc tgttttatgg aaatgttatt ccgtatttta
     1021 gacgagtttc ttctatggaa gaatacacaa ttttagggaa tgtgtctgat atggcagcta
     1081 gattctctga tagtgaataa gatttgaaat tacctaatgt ttactacagt gaaaagcaaa
     1141 ttagagaaga agtgactcgt tctttagaag ctttagcttg aatcataaaa tttgagagga
     1201 acgtaattat gcaaaaagat acatataacg gcattcgatt gagtgtaatc caattgatag
     1261 attcaaaaaa agaaaatctg aaggagaata atataaaatt aacaattata aagaatgaaa
     1321 aagacggtta tgttgtagaa ctggataatg acaaatgcat ggcagaaatt gtagttgaag
     1381 aacctactta tgccccatat cgctatattt catttgaagt agtttctttg atggatggaa
     1441 aagttaaaat tatctattct tggtatgatg atgaaacaag tcaatggagc gatattgaga
     1501 aagaattaaa taaaggaatt caatttctaa ataattttaa aacgatggag taataaaaga
     1561 acattattgc tgtacttaaa ttgctataag gaaatataat caca
//
LOCUS       DASDYO010000219         1562 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.221, whole genome shotgun sequence.
ACCESSION   DASDYO010000219 DASDYO010000000
VERSION     DASDYO010000219.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1562)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1562)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1562
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.221"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            367..597
                     /locus_tag="U0290_002951"
     CDS             367..597
                     /locus_tag="U0290_002951"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012951181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase"
                     /protein_id="HEM2302975.1"
                     /translation="MKQCPVCENYTIEANYDICEVCYWEYDVVAQEYPDEIIGANNIS
                     LKQAKINYAKFCAVEEKYITLVRKPRQDELPE"
     gene            676..903
                     /locus_tag="U0290_002952"
     CDS             676..903
                     /locus_tag="U0290_002952"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003765208.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302976.1"
                     /translation="MEYEQMADSLAYGEEYNFYYKNEEYWLSKNREGHYLTKVSDGET
                     QEFRTSEDLLGTARINGKLIIEIWENIQSQF"
     gene            1072..1448
                     /locus_tag="U0290_002953"
                     /pseudo
     CDS             1072..1448
                     /locus_tag="U0290_002953"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009924275.1"
                     /note="frameshifted; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          601 a          173 c          311 g          477 t
ORIGIN      
        1 aagtaaaaaa cactccacat ctcaattagc gtcgtaaaag tagatccttg ataaccttat
       61 tttttagaaa gtacggaata gaaaaatgaa atgatttgag cactttaaca aatttaatta
      121 tgagcttttt ggaaaaatat taatggataa ggtattggat gtagggtttt tcacaacaag
      181 tggattattg gaaggttatg aacatttagt agggtattat attttaggta tgattctaaa
      241 acaaatgaat ttgggattat aaacgagtat ggatctatat ctacatattt caaacctaat
      301 gctggattaa aatattggga gaaacaaatt gatttatatt atccgaaatg atgaggagga
      361 ataactttga aacagtgtcc agtttgtgaa aattatacga ttgaagctaa ttacgatatt
      421 tgcgaagtat gctactggga atatgatgtg gtagctcaag agtatccgga tgaaattata
      481 ggagctaata atatttcgtt aaaacaagca aaaataaatt atgcgaaatt ctgcgcagta
      541 gaggaaaaat atattacact tgttcgaaaa ccgagacagg atgaactacc ggagtgattg
      601 aacggataga gggagtttaa agtaatgtgc ttttttaata aatagagaac ctgtttctga
      661 aagaaggaaa gaagcatgga atatgaacaa atggctgata gtttagcata tggtgaggaa
      721 tataattttt actacaaaaa tgaggaatat tggttaagta aaaatcggga aggacattac
      781 ttaacgaaag tatccgatgg agaaacacaa gaatttagga cttcagaaga cttattagga
      841 acagctagaa taaatggaaa acttataata gaaatttggg aaaatataca aagtcaattc
      901 taaattgaag aaatagagac cttcattttc aagtgtttta tagttgttat agcttttttg
      961 ttagaaatgc taagaaagaa catacgagat tacatagttg acgattcata atacacgcac
     1021 accacacaaa tccattgact ataatattaa aaaataaatg aggtgaaaca attgaaaaaa
     1081 ttaacaacag aacagtcttt tgaatattac ctttcttcgc tatgtatgtt aggattgcat
     1141 acaattaatt tatccgacga agaaattgaa tatgaaatat ttgaagagtt agcaattgat
     1201 tatccagctg ctttgagtcc atatactagg gaattgttgg tggataatga cataattgat
     1261 agagggcttt ctttactaag caagcagctg caaactaaac tttttgaact tgatggagga
     1321 attctgtggt aaaagcattg agaacaacgc cagaatggaa agaggtttta cgattatctg
     1381 atgagataaa gggattgatt catcaacaat ggacagatga agagctagat tatttattgg
     1441 ggaaatagtt tcttagtcta tggaattagg tgtaaattct atgtgctctt tgaaaaagga
     1501 attgcctaca attaagtgaa tgccagaaat tgttgatatt aaaaatttaa atttatagaa
     1561 gt
//
LOCUS       DASDYO010000220         1555 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.222, whole genome shotgun sequence.
ACCESSION   DASDYO010000220 DASDYO010000000
VERSION     DASDYO010000220.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1555
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.222"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..839
                     /locus_tag="U0290_002954"
     CDS             <1..839
                     /locus_tag="U0290_002954"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEM2302977.1"
                     /translation="VTYESPLNYIGSKSKMIAEMKPLMPSEIDKFVDLFGGGFNVGIN
                     IKSQKTIYNDTNWIVKDLVKSFSKYETYDYLMYIQRMIKKFGLEASNRESYLNVRNHY
                     NSLPIADRDPRLLYTVILYGFQQQIRFNSDYDFNNPVGMRWFNDRVLEKMVSFSRAIK
                     EENFEFTSRSFEDYIDEIDSNTFVYMDPPYMLTNGSYNDGKRGFGGWTTEHEQKLMDF
                     ADELNRRGIKFMISYVLEHQGEVNDRMKDWLEYRLYKLINLNPIPGRKRKEVVIINYD
                     LS"
     gene            826..>1555
                     /locus_tag="U0290_002955"
     CDS             826..>1555
                     /locus_tag="U0290_002955"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEM2302978.1"
                     /translation="MTYHEVPHIVIKNNSQKGGYFFEDILTEEILTDVCRKVTGTSEY
                     TVEFDNEGGYNKGRLATISYKGSKIYVSFSQAGKVEGRNYNFQSLTTALVRFYRGSRH
                     SSRICFYFLPQEGNRETEYFSFMYRVMATAGVEFINDEQYLTQTIEKFANVQDIINAR
                     DRLREGKRNNNSSYLTKSEYGVAEIYAKTYGANKKEAVLISLAASHISKKIRIYEIRE
                     QNISVLPKPDKEALEMLPNVEIINT"
BASE COUNT          590 a          194 c          299 g          472 t
ORIGIN      
        1 aagttaccta tgaatcgcca ttaaactaca ttggtagtaa atccaagatg atagcagaaa
       61 tgaagccttt aatgccatca gaaatagata aatttgtaga cttgtttggc ggtggtttta
      121 atgttggcat taatattaaa agccagaaaa caatttataa tgatactaat tggattgtaa
      181 aagacttggt aaagtcgttc agtaaatatg agacatatga ttatttaatg tatatccaaa
      241 gaatgattaa aaaatttgga ctggaagcat ccaacagaga aagttattta aatgtacgaa
      301 atcattataa ttcattacct atcgctgaca gagatccacg tctattgtat accgttattt
      361 tatatgggtt tcagcaacag attcgattta atagtgatta tgattttaat aatcctgttg
      421 gaatgagatg gtttaacgat agggttctag aaaaaatggt gagtttttca agagctatta
      481 aagaggagaa ttttgaattc acaagccgta gtttcgaaga ctacattgat gagatagatt
      541 caaatacctt cgtctatatg gaccccccat acatgttaac taacggatct tacaatgatg
      601 gaaaaagagg tttcggtggt tggacaacag aacatgaaca aaaacttatg gattttgcag
      661 atgagttaaa tagaagaggt ataaaattta tgatttctta tgtactagag catcaaggag
      721 aagtaaacga tcgaatgaaa gactggttag aatataggct ttataaatta attaacttaa
      781 atcccattcc tggaagaaaa agaaaggagg ttgtaataat aaactatgac ttatcatgaa
      841 gttccccata ttgttattaa aaataactct caaaaaggtg gttatttttt cgaggatatt
      901 ttgacagaag aaattttaac agatgtttgt aggaaggtaa caggtacatc cgaatataca
      961 gtcgaatttg ataatgaagg aggatataat aaaggaagac tagctactat ttcatataaa
     1021 ggtagtaaga tatacgtgtc tttctctcaa gcaggaaaag ttgaaggacg aaattataac
     1081 tttcaaagtt taacaactgc tctagttagg ttttatagag gatctaggca tagtagtaga
     1141 atttgcttct attttctccc ccaagaagga aatagagaga ctgaatattt ttcttttatg
     1201 tatagggtga tggctacagc aggtgttgaa tttattaatg atgaacagta tttaacacaa
     1261 acgattgaaa aatttgcaaa tgttcaggac ataattaatg ctagagacag acttagagag
     1321 ggaaaaagaa ataataattc ctcttattta actaaaagtg agtatggtgt agcagagata
     1381 tatgcaaaaa catatggtgc aaacaaaaag gaagcagtac ttatatcgct tgcagcttca
     1441 catatttcta aaaaaattag aatctacgag ataagggaac agaatatatc tgttttgcca
     1501 aaaccagaca aagaagcctt agaaatgtta ccgaatgtag aaattataaa tactg
//
LOCUS       DASDYO010000221         1528 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.223, whole genome shotgun sequence.
ACCESSION   DASDYO010000221 DASDYO010000000
VERSION     DASDYO010000221.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1528)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1528)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1528
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.223"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1355
                     /locus_tag="U0290_002956"
     rRNA            <1..1355
                     /locus_tag="U0290_002956"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
     gene            1433..>1528
                     /gene="rrf"
                     /locus_tag="U0290_002957"
     rRNA            1433..>1528
                     /gene="rrf"
                     /locus_tag="U0290_002957"
                     /product="5S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00001"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00001"
BASE COUNT          401 a          352 c          457 g          318 t
ORIGIN      
        1 gaaggaaatt aagtacggaa gttcctgatt tcacgctgtc aagaaaagcc tctaggaaga
       61 gtagtactgc ccgtaccgca aaccgacaca ggtagatgag gagagaatcc taaggtgagc
      121 gagagaactc tcgttaagga actcggcaaa atgaccccgt aacttcggga gaaggggtgc
      181 tctattaggg tgcaagcccg agagagccgc agtgaatagg cccaggcgac tgtttagcaa
      241 aaacacaggt ctctgcaaaa ccgtaaggtg acgtataggg gctgacgcct gcccggtgct
      301 ggaaggttaa gaggagtgct tagcttcggc gaaggtacga attgaagccc cagtaaacgg
      361 cggccgtaac tataacggtc ctaaggtagc gaaattcctt gtcgggtaag ttccgacccg
      421 cacgaaaggc gcaacgatct gggcactgtc tcaacgagag actcggtgaa attatagtac
      481 ctgtgaagat gcaggttacc cgcgacagga cggaaagacc ccgtggagct ttactgcaac
      541 ctgatatgga atgtttgtac cgcttgtaca ggataggtag gagccgaaga gacgtgtgcg
      601 ctagcatacg aggaggcaat ggtgggatac taccctggct gtatgaccat tctaacccgc
      661 cacgcttagc gcgtggggag acagtgtcag gtgggcagtt tgactggggc ggtcgcctcc
      721 taaagagtaa cggaggcgcc caaaggttcc ctcagaatgg atggaaatca ttcgcagagt
      781 gtaaaggcac aagggagctt gactgcgaga ctgacaagtc gagcagggac gaaagtcggg
      841 cttagtgatc cggtggttcc gcatggaagg gccatcgctc aacggataaa agctaccccg
      901 gggataacag gcttatctcc cccaagagtc cacatcgacg gggaggtttg gcacctcgat
      961 gtcggctcgt cgcatcctgg ggctgtagtc ggtcccaagg gttgggctgt tcgcccatta
     1021 aagcggcacg cgagctgggt tcagaacgtc gtgagacagt tcggtcccta tccgtcgcgg
     1081 gcgcaggaaa tttgagagga gctgtcctta gtacgagagg accgggatgg acacaccgct
     1141 ggtgtaccag ttgttccgcc aggagcatcg ctgggtagct atgtgtggca gggataaacg
     1201 ctgaaagcat ctaagcgtga agcccccctc aagatgagat ttcccatttc ttcggaaagt
     1261 aagatccctg aaagatgatc aggtagatag gtttggagtg gaagtgtagc gatacatgga
     1321 gcggacaaat actaatcgat cgaggactta accaaaaaat gaaacgaagt tacctaactg
     1381 aaccctttct tctctagttt tgagagagca atctttcaac aactttatat tgtctggtag
     1441 ttatggcgag aaggtcacac ccgttcccat cccgaacacg gtagttaagc ttctctgcgc
     1501 caatggtagt tgggggcttc cccctgcg
//
LOCUS       DASDYO010000222         1472 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.224, whole genome shotgun sequence.
ACCESSION   DASDYO010000222 DASDYO010000000
VERSION     DASDYO010000222.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1472)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1472)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1472
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.224"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            45..1250
                     /locus_tag="U0290_002958"
     CDS             45..1250
                     /locus_tag="U0290_002958"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464775.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MFS transporter"
                     /protein_id="HEM2302979.1"
                     /translation="MKEKLFNKGFVLITLINFVVYLVYYLLMVIIAVIAQEELNASLG
                     EAGFASGIYIIGTLLARLYMGKKLELFGRKRVLRFGILFFLVTTMAYLYMPTIAIMFI
                     IRFLNGFAYGTTSTATNAIVTAYIPNSRNGEGINYYGLSTSLAAAIGPFIGMILLSKT
                     SFYTIIIFSTVIVLLTALLCFYLPVKNIVLTTEHRKALQTWTVKSFIEYKVIPITFIA
                     FLMGISYSSVLTFLASYAREINLVSAGTFFFVVYALVITLTRPMSGKLFDAKGEKYVM
                     YPSYLFLAVGLVVLSTATSSLVLLISGGLIGLGYGTFMSNGQAVCLKVCEPHRIGIGL
                     STYFIGLDLGLGIGPYIMGEIHHVLSFQGIYIIAGAIAFICVFIYMFLSRKKVSSGAQ
                     EQLKGSEEV"
     gene            1247..>1472
                     /locus_tag="U0290_002959"
     CDS             1247..>1472
                     /locus_tag="U0290_002959"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464774.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302980.1"
                     /translation="MNKLLLITAAGYIVGVRSIEKENNQSILLNDVYINNPSQRLIDH
                     FESLEIAKEQVIGHKKLSTNDAQNLISRWEA"
BASE COUNT          426 a          250 c          289 g          507 t
ORIGIN      
        1 gctgagataa attacaaatt ataggtagga agggatttta ttctatgaaa gaaaaattat
       61 ttaacaaggg ttttgtctta ataacattga ttaactttgt cgtttatctc gtttattatt
      121 tgctaatggt tattattgcc gttattgctc aagaagagtt gaacgcgtct cttggtgaag
      181 ccggatttgc gtctgggatt tatattatcg ggacgctcct cgcacgactt tacatgggga
      241 aaaagctgga actatttggt cgtaagcggg ttttaagatt tgggatttta tttttcttag
      301 taacgacgat ggcttactta tacatgccaa cgattgccat tatgtttatt attcgttttt
      361 taaatggatt cgcatacgga acaacttcaa ctgctaccaa tgcgattgtc acagcttata
      421 ttcctaattc tagaaacgga gaagggatta attattatgg cctcagcaca agtctcgcag
      481 ctgcgattgg accgttcatc ggaatgattt tacttagcaa aacgagcttt tatacgatta
      541 ttattttctc cacggttatt gtcttattaa ctgcgctact ttgcttctat ttacccgtga
      601 aaaatattgt tttaacaacc gaacaccgga aggccttaca aacttggacc gtcaaaagtt
      661 ttattgaata taaagttatt ccaataacat ttattgcctt cttaatgggg atttcttatt
      721 ccagtgtgct tacattcctt gcttcctatg ctagagaaat taatttagtg agtgctggaa
      781 cgttcttctt tgttgtctat gcattagtta ttactctaac tcgcccaatg tctggaaaac
      841 ttttcgatgc aaaaggcgaa aaatatgtga tgtatccaag ttatctcttt ttagcagttg
      901 gattagtggt ccttagtaca gcaacatcaa gtctcgtgct acttatttca ggcggactca
      961 tcggcttagg ttatggaacg tttatgtcga atggccaagc tgtctgttta aaagtatgtg
     1021 aacctcaccg tattgggatt ggcctatcta cctactttat cgggcttgat ttaggacttg
     1081 gtattgggcc ttatattatg ggtgaaattc atcatgtgct ttcattccaa ggtatttaca
     1141 ttattgccgg tgctatcgca tttatttgcg tattcatcta tatgttctta tccagaaaaa
     1201 aagtgtctag tggtgcacag gaacaactaa aagggagtga agaagtatga ataaattatt
     1261 actcattaca gcagcgggtt atatcgtagg agttagaagt atagaaaagg agaacaacca
     1321 atctattcta ctaaacgatg tctacattaa taatccttca caacgattaa ttgatcattt
     1381 tgagagtctc gaaattgcca aagagcaagt aatcggtcat aaaaagttat ccactaatga
     1441 tgctcaaaat ttaataagtc gctgggaagc aa
//
LOCUS       DASDYO010000223         1414 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.225, whole genome shotgun sequence.
ACCESSION   DASDYO010000223 DASDYO010000000
VERSION     DASDYO010000223.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1414)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1414)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1414
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.225"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..192)
                     /locus_tag="U0290_002960"
     CDS             complement(<1..192)
                     /locus_tag="U0290_002960"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_005341369.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2302981.1"
                     /translation="MQKIRPDMDIGKNIQRLRNNSKMTQDQVVAKMNIMGLNISKSTY
                     AKLETNRMNIRVSELVALKI"
     gene            327..491
                     /locus_tag="U0290_002961"
     CDS             327..491
                     /locus_tag="U0290_002961"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724645.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302982.1"
                     /translation="MSDFIEKNAQNYIKELFQQITEEQLTELVTTFSHGFKLGMQLAF
                     DAIVTREKGK"
     gene            492..788
                     /locus_tag="U0290_002962"
     CDS             492..788
                     /locus_tag="U0290_002962"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724760.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302983.1"
                     /translation="MNFEFKTNQFSLLVKPDLSVHLQKISEVGDRVELVVQTKFCSYS
                     INIEDTKKLQILLPLLQLEVQTILATYQLQLITNSFNIQDNTCYFDFTTKEVSL"
     gene            788..1045
                     /locus_tag="U0290_002963"
     CDS             788..1045
                     /locus_tag="U0290_002963"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003746888.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302984.1"
                     /translation="MEHYTIEQDFDQFCLARIESICERDSNHKEFQEKTRSYYKLRDQ
                     LEELWKPEIIRYLDALEKYQIEAFLYIYREAFKEGIRFAHR"
     gene            1134..>1414
                     /locus_tag="U0290_002964"
     CDS             1134..>1414
                     /locus_tag="U0290_002964"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724647.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302985.1"
                     /translation="MEFLSQNWFGLLVFIALAMGLYHLTKKEKEKDGITDYSKEDLGG
                     RFNNLQNGDTWLMFEYNKITQQRKKQYILENYFQSMEVENEHGYLYCIS"
BASE COUNT          504 a          174 c          253 g          483 t
ORIGIN      
        1 tattttcagt gcaacaagtt cacttacacg tatattcatg cgattagttt ctaactttgc
       61 atatgtactt ttggagatat ttaagcccat gatgttcatc ttagcaacaa cttggtcttg
      121 tgtcatttta gaattatttc ttagtctttg gatattttta ccaatatcca tatcgggtct
      181 tatcttttgc attgcaatct caccaccttg catattaatt cgtcataacg aattatagta
      241 ttgattttac tatctaattc cattataatg tttcgtaata gggaattatt tcgctataag
      301 gaatttttga gggaggtgag taaattatga gtgattttat tgagaagaat gcacagaact
      361 atattaagga gctgtttcag caaataactg aagaacaact aactgaatta gttacaacat
      421 tttcacatgg ctttaagcta ggtatgcaac tagcttttga tgcaattgtg acaagggaga
      481 aggggaagta aatgaacttt gaatttaaga ctaaccaatt ttcactgtta gtaaaaccag
      541 atttatctgt acatcttcaa aaaataagtg aagttggtga tagggtggaa ttagttgttc
      601 aaactaaatt ttgtagttat tcaattaata ttgaagatac aaagaaatta caaatcttat
      661 taccgttgct acaattagaa gtacaaacta ttttggcaac atatcagcta caattaataa
      721 ctaatagttt taatatacag gataatacct gctattttga tttcactact aaagaggtga
      781 gtttatgatg gagcattata caatagaaca agattttgac cagttctgtc ttgctcgcat
      841 tgagagtatt tgtgagcgag acagtaatca taaagaattc caagaaaaaa ctagaagtta
      901 ttataaatta cgtgatcaat tagaagaatt atggaaacca gaaataatca gatatcttga
      961 tgctttggag aaatatcaaa ttgaagcttt tctttatatt tatagagagg cgtttaaaga
     1021 aggcatacgt tttgcacata gatgaactat attatgatgc ggattgtgaa atatattcat
     1081 ttagctagcc tattatagta taatagagac atactataat aaggagcatg catatggaat
     1141 ttttatcgca aaattggttc gggttgttgg tattcatagc tttagctatg ggattgtatc
     1201 atcttacaaa aaaagagaaa gaaaaagatg gtataactga ctatagcaaa gaagatttgg
     1261 gaggaagatt taataacctt caaaatggtg atacatggtt aatgtttgaa tataataaaa
     1321 taacacaaca aagaaagaag cagtatattt tggaaaatta ttttcaaagt atggaggtag
     1381 aaaatgagca tggctattta tattgtattt ctga
//
LOCUS       DASDYO010000224         1395 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.226, whole genome shotgun sequence.
ACCESSION   DASDYO010000224 DASDYO010000000
VERSION     DASDYO010000224.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1395)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1395)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1395
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.226"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            325..798
                     /locus_tag="U0290_002965"
     CDS             325..798
                     /locus_tag="U0290_002965"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726037.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302986.1"
                     /translation="MTFLNTLKLNLENEKKRMLSDAFMKKQEGIIVNYIVTCSKDSAI
                     GISKKAIDILLIINENTFPEWPNVDRWLSILPKYFTDSFSKSKILHSEDWLFEEWLYW
                     FEPENRFWFLGELDPVDNEHLKISIVVQEHPFPVESLEVLLMKLGTSELHEIGME"
     gene            904..1266
                     /locus_tag="U0290_002966"
     CDS             904..1266
                     /locus_tag="U0290_002966"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012581428.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2302987.1"
                     /translation="MENYVSIVKIENNLSVCFYNSSEKVVAIAKKMNEINEEAYMHGY
                     NWEAFFNYYLPKYAPDVLEGMGSDPEAGMYVAYYTLSPETEARAEKLVQVITNLIENE
                     ELLYQIIENEGNNISWDN"
BASE COUNT          520 a          181 c          259 g          435 t
ORIGIN      
        1 tttcaccagt ctccatagga gtgtggtagc tgattgcaca gtaattatat actttacgtc
       61 aatatcaaaa gcaagtccaa ttaaaatgga ttaccttgcc ccgtaaatga caacttctga
      121 aaataggtaa aaggaacaaa agatgatgta attagggtct agtgcatttg tggtgaattt
      181 aggttttgat tataatgaga atctccgttt agaggttgtt cttttgaaaa cgatagaagc
      241 aattataggt atcgactacc atatattact gaaaaaagag ctagattaaa taaaaaaata
      301 attctaacat cataggaggc aattatgact tttttaaaca ccttaaaatt aaatttggaa
      361 aatgaaaaaa agagaatgtt atccgatgct tttatgaaaa aacaagaagg aatcattgta
      421 aactatatag tgacttgcag taaggattct gctattggca ttagtaaaaa ggcaattgat
      481 atattattga taatcaatga aaatacattt cctgaatggc caaatgtaga tagatggctt
      541 tctattttgc caaaatattt tacggattct ttttcaaaat caaaaatatt gcatagtgaa
      601 gattggctat ttgaagagtg gttatactgg tttgaacctg aaaatagatt ttggttttta
      661 ggagaattag atcctgttga taatgagcat ttgaaaataa gcatagttgt acaagaacac
      721 ccttttccag tagaatcatt agaagttcta cttatgaagc taggaacaag cgaattacat
      781 gaaattggta tggaatgagg ttaaatgtac ttttaacgga tatatctttt acaatagagc
      841 tgaattttgt tagagtttaa aatgaaaaaa caactaagtt ataacgaaag gagctaacac
      901 ttgatggaaa attacgtgtc aatagtaaaa atcgaaaaca atctttccgt gtgcttttac
      961 aacagctcgg agaaagtagt agcaattgct aagaaaatga atgagattaa cgaagaagct
     1021 tatatgcatg gttacaattg ggaagcattt ttcaactact atttacctaa atatgctcca
     1081 gatgtcttag aaggaatggg ctctgatccg gaagcgggaa tgtatgtggc gtattacacg
     1141 ctatcacctg aaactgaggc acgagcagaa aaacttgttc aagtaattac gaatctcatc
     1201 gaaaatgaag aactacttta tcaaataatt gaaaatgaag gcaataatat tagttgggat
     1261 aattaatcct ttttctaaaa aatccttatc tatttgttcg tatagtatta gcaagaggtg
     1321 aagaacctgt ataatataat tgacgatatt ttaaagcatt agatcctatt ggcagatgct
     1381 cttaaaacgt taaac
//
LOCUS       DASDYO010000225         1379 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.227, whole genome shotgun sequence.
ACCESSION   DASDYO010000225 DASDYO010000000
VERSION     DASDYO010000225.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1379)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1379)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1379
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.227"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            99..995
                     /gene="murB"
                     /locus_tag="U0290_002967"
     CDS             99..995
                     /gene="murB"
                     /locus_tag="U0290_002967"
                     /EC_number="1.3.1.98"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464945.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="UDP-N-acetylmuramate dehydrogenase"
                     /protein_id="HEM2302988.1"
                     /translation="MNNLQTQFPHIAIKLNEPLSKYTYTKTGGAADVFVMPKTIEETQ
                     EVVAYCHQNKIPLTILGNGSNLIIKDGGIRGVILHLDLLQTIERNNTQIIAMSGAKLI
                     DTAKFALDESLSGLEFACGIPGSIGGALHMNAGAYGGEISDVLEAATVLTQTGELKKL
                     KRSELKAAYRFSTIAEKNYIVLDATFSLALEEKNLIQAKMDELTAAREAKQPLEYPSC
                     GSVFKRPPGHFAGKLIQDSGLQGHIIGGAQVSLKHAGFIVNIGGATATDYMNLIAYVQ
                     QTVREKFDVELETEVKIIGEDK"
     gene            1012..>1379
                     /locus_tag="U0290_002968"
     CDS             1012..>1379
                     /locus_tag="U0290_002968"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464944.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM2302989.1"
                     /translation="MKELSSFLQNRSVRRVGVFILIAFVLYLLRSQMNIILLTFIFSY
                     LITRLENFILRRISIYRQIIVLLLYVLIAAVIIFVFVKYIPVLADQINQLVKFGNTFL
                     TTDSNNDFINYIVSLANQFD"
BASE COUNT          472 a          231 c          259 g          417 t
ORIGIN      
        1 aagaaaaaaa ctatggaatt ctttgtaaaa gagaggttcc atgataaaat aaaggaagtg
       61 atttttaaac tacaaccatg aaaggtttga aataaataat gaataactta caaacacagt
      121 ttccgcatat agcgattaaa ttaaatgaac cgttgtctaa gtatacctat acaaaaacag
      181 gcggcgcggc agacgtattc gttatgccaa aaacaataga agagacgcaa gaagtggtgg
      241 cctactgtca ccaaaataaa atccctctta ctattctcgg aaatggttcc aatctaatca
      301 ttaaagacgg cggaattcgc ggcgttattt tacatcttga tttactacaa accattgaaa
      361 gaaacaatac ccaaattatc gccatgagtg gtgccaaact cattgataca gcaaaattcg
      421 ctttagatga aagcttaagc ggacttgaat ttgcttgtgg tattcccgga tctattgggg
      481 gagcactaca tatgaatgca ggagcatacg gaggcgaaat tagtgatgtt ttagaagctg
      541 caaccgtgct gacacaaaca ggtgaattaa aaaaactaaa acgttcagaa ctaaaagcag
      601 cttatcgctt tagtactatt gcagaaaaaa attacatcgt attagatgct actttttctt
      661 tggccttaga agaaaaaaac ctaattcaag caaaaatgga tgaacttact gcagcacgtg
      721 aagctaaaca accattagag tatccatctt gtggtagtgt attcaaacgt ccaccaggtc
      781 actttgcggg taaattaatt caagatagtg gcttgcaagg ccatattatt ggcggcgcgc
      841 aagtttcttt aaaacatgct ggatttatcg ttaatatcgg tggggcaact gcgactgact
      901 acatgaattt aattgcttac gtccaacaaa cggttcgcga gaaatttgat gtagagttag
      961 aaacagaagt taaaatcata ggcgaagata aatagaggag ggcatccatt tttgaaagag
     1021 cttagttcat ttttacaaaa tcgtagtgtg cggcgagttg gcgtatttat attaattgcc
     1081 ttcgttttat acttattaag aagccaaatg aatattattt tactaacatt cattttttct
     1141 taccttatta cacgtttaga gaattttatt ttacggagaa tctccattta tcggcaaatt
     1201 attgtgttgt tactttatgt tttaatcgcc gcagttatca tcttcgtatt tgttaagtac
     1261 attcctgtct tagcggatca aataaatcaa ctagtgaaat tcggaaatac tttcttaacg
     1321 acagatagca acaatgactt cattaattac attgttagtt tagcgaatca atttgatat
//
LOCUS       DASDYO010000226         1376 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.228, whole genome shotgun sequence.
ACCESSION   DASDYO010000226 DASDYO010000000
VERSION     DASDYO010000226.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1376)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1376)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1376
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.228"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..181
                     /locus_tag="U0290_002969"
     CDS             <1..181
                     /locus_tag="U0290_002969"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF3578 domain-containing protein"
                     /protein_id="HEM2302990.1"
                     /translation="IKGELYKIYRVYDYNTAPKLKIIDNLFDETLEIKPINYIVKGVN
                     QNDNNTKNQLPKNTL"
     gene            138..1220
                     /locus_tag="U0290_002970"
     CDS             138..1220
                     /locus_tag="U0290_002970"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003738030.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="aminotransferase class I/II-fold pyridoxal
                     phosphate-dependent enzyme"
                     /protein_id="HEM2302991.1"
                     /translation="MTTTLKTSYQKTPYKLGGNGPRNVGVLTEALQNIDDNLESDIYG
                     NGAVIANFETKIAKILGKQSAVFFPSGTMAQQIALRIWADRKENRRVAYHPLSHLEIH
                     EQDGLKELQQITPILLGTANRLLTIADIKSLREPVSSVLIELPQREIGGQLPAFEELE
                     EISEYCHEQGISLHLDGARLWEITPFYQKSAEEICALFDSVYVSFYKGIGGVAGAILA
                     GNDDFVQEAKIWKRRYGGDLISLYPYILSADYYFEKRIGKMAEYFEAAKGLAERFNSC
                     PGVKTVPEVPVSNMFHVYFEKSADEIGAVLTKIQDETGVGISGYLQEKSADVCAFEVS
                     VGDAFAEIPAKNLELVFECLEKELRL"
BASE COUNT          403 a          207 c          355 g          411 t
ORIGIN      
        1 aataaaaggt gagctttata aaatttatcg ggtatatgat tataatacag cgccaaaact
       61 gaagattatt gataatttat tcgatgagac cctagaaata aaaccaatca attatatcgt
      121 aaaaggagtg aaccaaaatg acaacaacac taaaaaccag ctaccaaaaa acaccttata
      181 aactaggcgg gaacggtccg cgcaatgtag gtgttctgac agaagcactt caaaatattg
      241 atgataacct agaaagcgat atttacggaa atggcgcagt tattgcaaac tttgaaacaa
      301 aaatcgcgaa aattctcggg aaacaatctg cggtgttttt cccaagtggg acgatggctc
      361 agcaaatcgc gttaaggatt tgggctgacc ggaaagagaa tcggcgcgtg gcatatcatc
      421 cgctttcgca tttggagatt cacgagcaag acggactaaa agagttgcag caaatcacgc
      481 caatattact tggaacagcg aatcgacttt tgacaattgc tgatattaaa agcctgcgcg
      541 agccagtttc tagtgtgctt atcgaacttc cacaacgaga aattggtggg cagctgcctg
      601 cttttgaaga gcttgaggag atttcggagt attgccatga acagggtatt tcgttgcatc
      661 ttgacggggc acggttatgg gaaatcacgc cgttttatca gaagtctgcg gaagaaattt
      721 gtgcgctgtt tgatagtgtg tatgtgtcgt tttacaaagg aattggcggg gttgctgggg
      781 cgattctggc tgggaatgat gattttgtgc aagaggcgaa aatctggaaa cgacggtatg
      841 gcggggattt gattagtttg tatccatata ttttgtccgc ggattattat tttgaaaaac
      901 ggattgggaa aatggcggaa tattttgagg cggcgaaagg attggcggag cgctttaatt
      961 cgtgtccggg cgtgaagact gtgccggaag tgccggtttc taatatgttt catgtttatt
     1021 ttgagaagtc ggctgatgag attggggcgg ttttgacgaa gattcaggat gaaactgggg
     1081 ttgggatttc ggggtatttg caggagaaat cggcggatgt ttgtgcgttt gaggtttcgg
     1141 ttggggatgc gtttgcagag ataccggcaa aaaatttaga actagttttt gaatgtttgg
     1201 aaaaggaact tagactataa atttggatat aaaaagacaa gctattttct atagtagctt
     1261 gtctttttta gtatgaatta tattttattt cgactgatta tttggtcttc ataagatttt
     1321 aaatcggata gaatttcatt aattgtctta gttttttctt ttggcatttc taagga
//
LOCUS       DASDYO010000227         1348 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.229, whole genome shotgun sequence.
ACCESSION   DASDYO010000227 DASDYO010000000
VERSION     DASDYO010000227.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1348
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.229"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..>1348)
                     /locus_tag="U0290_002971"
     CDS             complement(<1..>1348)
                     /locus_tag="U0290_002971"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="DUF1430 domain-containing protein"
                     /protein_id="HEM2302992.1"
                     /translation="IVLANGLATYLVEIVWKLLLFNVLLFIFILFPMYFFGLLRIKKI
                     DQAKSDQRMQSSRQHLAINLVIKFVLLCLFIGTFIASYQSLQTLNTRLANIDVWEATK
                     DIFKVKVGVLPEGIQDNLKADKELNNNLSAFYEEGTSKKEMFLMYSNNFQRSETNTFF
                     YETYLKKDSEINSPEGNSVEIDFNYLKLNPIKSIKGQNVEKEAIISDKVLNIIVPNSK
                     KGLEKDIKNTFLDYFYFQKVEVANIYNKALDLPAVALSKEDLSVNIIYAENNQDYFSY
                     DSNTGDFRTGNITDPIAIVYTGNIDSSSIGAHVTSSVYFIDKSNGDAFNAILPLISNS
                     NAREITHVRSVYQEVSSEITTLKWQIYQQLIGTIILALCLCSFMVLLVLSYYGENLYK
                     QLIYHVFGYSFWKSSKWFSISNLFVSVFSGILIFILSKEPVALYFSVVILIIELCAI"
BASE COUNT          474 a          242 c          179 g          453 t
ORIGIN      
        1 aatggcacat agttctatta tgagaataac aacgctaaaa tatagggcaa ccggttcttt
       61 gctaagaata aaaatgagga ttccagaaaa aacactcaca aacaaattgc ttatactaaa
      121 ccatttacta cttttccaaa acgaatagcc aaatacatga taaattagtt gcttatataa
      181 gttctccccg taataggaca gtacaagaag taccataaaa gagcataagc atagggctaa
      241 gataatcgta cctatcaatt gctgatatat ttgccatttc aaagtagtta tttcgcttga
      301 aacttcttga taaacactcc ttacatgggt aatttctctt gcatttgaat tactaataag
      361 tggtaagata gcgttaaaag cgtcaccatt cgatttatca ataaaatata cagaagaagt
      421 tacatgagcg ccaatactag atgagtcaat atttcccgta tatacaatcg caattggatc
      481 cgtgatattt ccagtcctaa aatccccagt attactatca taggaaaaat aatcttgatt
      541 attttctgca taaataatat taacacttaa gtcttcctta cttagcgcca cagcaggcag
      601 gtctaaagct ttgttataaa tattcgccac ttctactttt tgaaaataga agtaatcgag
      661 aaaagtgttt tttatatctt tctctagtcc cttcttacta ttaggaacaa taatattcaa
      721 aactttatca ctgattatcg cttctttttc cacgttctga ccttttatac ttttaatcgg
      781 atttaatttt aagtaattaa aatcaatttc tacgctatta ccctcaggtg agtttatttc
      841 agagtccttt ttcaaataag tttcatagaa aaaagtatta gtttcacttc gctgaaaatt
      901 attcgaatac attaaaaaca tctctttctt agatgtacct tcttcataaa aagcacttaa
      961 attgttgttt agctctttat cagcttttaa gttatcttga atcccctcag gtaaaacccc
     1021 tacttttact ttaaaaatgt cctttgtagc ttcccataca tcaatattag ctagtcttgt
     1081 atttaatgtc tgaagtgatt gataagaagc aataaaagta cctataaata agcagagcag
     1141 cacaaattta ataactagat tgattgccaa atgctgtctt gatgattgca tacgctggtc
     1201 tgattttgct tgatcaattt tctttattct aagtaatcca aagaaataca ttggaaacag
     1261 aataaaaata aataaaagta cattaaataa aagcaacttc cacactatct ccactaagta
     1321 cgtggctagc ccatttgcta aaacaata
//
LOCUS       DASDYO010000228         1343 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.230, whole genome shotgun sequence.
ACCESSION   DASDYO010000228 DASDYO010000000
VERSION     DASDYO010000228.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1343)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1343)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1343
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.230"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(16..>1343)
                     /locus_tag="U0290_002972"
     rRNA            complement(16..>1343)
                     /locus_tag="U0290_002972"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          280 a          412 c          307 g          344 t
ORIGIN      
        1 tttccttttc cttagaaagg aggtgatcca gccgcacctt ccgatacggc taccttgtta
       61 cgacttcacc ccaattatct gtcccacctt cggcggctgg ctccataaag gttaccctac
      121 cgacttcggg tgttacaaac tctcgtggtg tgacgggcgg tgtgtacaag gcccgggaac
      181 gtattcaccg tggcatgctg atccacgatt actagcgatt ccggcttcat gtaggcgagt
      241 tgcagcctac aatccgaact gagaatagtt ttatgggatt agctccacct cgcggcttcg
      301 cgaccctttg tactatccat tgtagcacgt gtgtagccca ggtcataagg ggcatgatga
      361 tttgacgtca tccccacctt cctccggctt gcaccggcag tcactttaga gtgcccaact
      421 aaatgctggc aactaaaatc aagggttgcg ctcgttgcgg gacttaaccc aacatctcac
      481 gacacgagct gacgacaacc atgcaccacc tgtcactttg tccccgaagg gaaagctctg
      541 tctccagagt ggtcaaagga tgtcaagacc tggtaaggtt cttcgcgttg cttcgaatta
      601 aaccacatgc tccaccgctt gtgcgggccc ccgtcaattc ctttgagttt caaccttgcg
      661 gtcgtactcc ccaggcggag tgcttaatgc gttagctgca gcactaaggg gcggaaaccc
      721 cctaacactt agcactcatc gtttacggcg tggactacca gggtatctaa tcctgtttgc
      781 tccccacgct ttcgcgcctc agcgtcagtt acagaccaga gagtcgcctt cgccactggt
      841 gttcctccac atatctacgc atttcaccgc tacacgtgga attccactct cctcttctgc
      901 actccagtct tccagtttcc aatgaccctc cccggttaag ccgggggctt tcacatcaga
      961 cttaaaagac cgcctgcgcg cgctttacgc ccaataaatc cggacaacgc ttgccaccta
     1021 cgtattaccg cggctgctgg cacgtagtta gccgtggctt tctggttaga taccgtcaag
     1081 ggacaagcag ttactcttat ccttgttctt ctctaacaac agtactttac gatccgaaaa
     1141 ccttcttcat acacgcggcg ttgctccgtc agactttcgt ccattgcgga agattcccta
     1201 ctgctgcctc ccgtaggagt ctgggccgtg tctcagtccc agtgtggccg atcaccctct
     1261 caggtcggct atgcatcgtt gccttggtag gccattaccc taccaactag ctaatgcacc
     1321 gcgggcccat ctgtaagcga tag
//
LOCUS       DASDYO010000229         1340 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.231, whole genome shotgun sequence.
ACCESSION   DASDYO010000229 DASDYO010000000
VERSION     DASDYO010000229.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1340)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1340)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1340
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.231"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            1..603
                     /locus_tag="U0290_002973"
     CDS             1..603
                     /locus_tag="U0290_002973"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465009.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-hairpin-helix domain-containing protein"
                     /protein_id="HEM2302993.1"
                     /translation="MMDLVKKHKNYILIGIAILCAGLVYIWIPDSKSDAVTANQAVTK
                     EEKPKKEETKLSNEVYIDIKGAVRTPGVYKLPMDARVQDVVKIAGGLTAEADCSKLNL
                     AEKLKDEMSIYVYKKGEEGPATQGANTEEASTGSAKINLNSATKDDLQQVPGIGESKA
                     TAIIEYREKEGLFQTIEDLKNVSGIGEKTVEKLKEYLDVN"
     gene            675..1235
                     /locus_tag="U0290_002974"
     CDS             675..1235
                     /locus_tag="U0290_002974"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465008.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ComE operon protein 2"
                     /protein_id="HEM2302994.1"
                     /translation="MQRIAWDQFFMAQSHLISSRSTCTRLMVGATIVRDKRIIAGGYN
                     GSIAGGDHCAEHGCYVVDGHCIRTIHAEMNAILQCAKFGATTDKAELYVTHFPCLACT
                     KSIIQAGIKKVYFAKDYKNHPYALELFNIAGVELQKVEFDESVLQVNNWNGEKMHTLV
                     KEAAVEVNIEPEKAEQLYQNISEKLN"
BASE COUNT          488 a          205 c          289 g          358 t
ORIGIN      
        1 atgatggact tagtaaaaaa acacaaaaat tatatcttaa tagggattgc tattctttgt
       61 gctggtttag tttatatttg gataccagat agtaaatctg atgctgtaac tgccaatcaa
      121 gcagtaacga aagaagaaaa accgaagaaa gaagaaacaa aattatcaaa tgaagtttat
      181 attgacatta aaggagcagt aaggacccct ggtgtctata aactgccaat ggacgctaga
      241 gttcaagatg tggtgaaaat tgcaggaggg ctcacagctg aagccgattg cagtaaattg
      301 aatttagctg aaaaactaaa agacgagatg agtatctacg tttataaaaa gggagaagaa
      361 ggtcccgcaa cacaaggagc taacacagaa gaagcaagta ccggttctgc gaaaattaac
      421 cttaacagtg caacgaagga cgatttacaa caagtcccag ggattggaga atcgaaggca
      481 acagcgataa tagagtaccg agaaaaagaa ggcttattcc aaacaataga agatttaaaa
      541 aatgtttcag gcatcggcga aaaaacagta gagaaattaa aagaatattt ggatgttaat
      601 taataaaagt ggttgacgaa cttccttcta aacacctata ctaatattta tcaaatcata
      661 agggagtttt taatgtgcag agaatcgcat gggatcagtt ttttatggcg caaagtcatc
      721 taatatcatc taggagcacg tgtacacgac taatggtcgg tgcgacaata gttcgagata
      781 aacgtattat tgcgggcgga tataatgggt ccatcgctgg tggcgatcat tgtgcagaac
      841 acggctgtta tgttgtagac ggtcactgca ttcgaacaat acatgcagag atgaacgcga
      901 ttttacaatg tgctaaattt ggtgcaacga cagataaagc tgaattatat gtaacgcatt
      961 tcccttgtct tgcttgtacg aaatctatta ttcaagcagg tataaagaaa gtgtatttcg
     1021 ctaaagacta caaaaaccat ccgtacgctt tagaattatt taacattgct ggcgtcgaat
     1081 tacaaaaagt agaatttgat gaatctgttc ttcaagtaaa caattggaat ggagaaaaaa
     1141 tgcatacttt agtaaaagaa gctgcagtgg aagtaaatat cgaaccagaa aaagcagagc
     1201 aactttatca aaacatctca gagaaattga actaaatagg gaggggacgt tatcgagcga
     1261 tatttagcta ttattgtttt agctattgtt tgtgcgaatt ttacaagctc tatcgttccc
     1321 atatgtattt gtttgctagg
//
LOCUS       DASDYO010000230         1314 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.232, whole genome shotgun sequence.
ACCESSION   DASDYO010000230 DASDYO010000000
VERSION     DASDYO010000230.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1314
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.232"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            426..1259
                     /locus_tag="U0290_002975"
     CDS             426..1259
                     /locus_tag="U0290_002975"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466045.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="resuscitation-promoting factor"
                     /protein_id="HEM2302995.1"
                     /translation="MKKTVVAIAAGLIIAGSGSTQAFAAEYKVQDGDSLWKISNENNV
                     SIKQLKEDNNLSSDIIFPNQTLQVNSSEKKSTTNNNSEYTVVAGDTLGHIAVDKGVTV
                     NQLKSWNNLSSDLILVGQKLSIGNKASASESNASENNSTANNSANNKVTEQPKEEKAA
                     PTTQKSTSSNEASSNSSSAQGNVSKELTVTATAYSKAEPGMGHMTATGIDLNDNSRVI
                     AVDPSVIPLGSKVYVEGYGQAIAADTGGAIKGNKIDVHLNSVQEANNWGVKQVKVQIL
                     D"
BASE COUNT          505 a          202 c          231 g          376 t
ORIGIN      
        1 gagtagttaa tatacctcaa gaagaggatg aatgatgtaa tactttgtta taaagagcca
       61 tatttcataa tgaattttaa aaatcccacc ccaaaaaaca acaaaatcaa taaattatca
      121 gctcaatttg taatggaaaa attttccaat tttagttact tcgcacattt aattcattaa
      181 gtgaacaatc aggaaacctt ttattaattg actaaatccc cacggcgagt taggctagat
      241 tgattttcac agaaaataca accagtagca atagaaatca gacaataaag gcaatttaca
      301 aatattgcag gaaaacggat actatttgaa agtgtgtcat acatgcttaa tttttcagta
      361 accaagctga tagtttcgta tggtacgatt atcctcgaaa gttatcaagg agggaaaata
      421 attacatgaa gaagacagta gtagccattg cggctggttt aattattgca ggatctggtt
      481 caactcaagc ttttgcagct gagtataaag tgcaagatgg tgattcacta tggaaaatat
      541 caaatgaaaa taatgtctct ataaaacaat tgaaagaaga taacaatttg agttctgaca
      601 ttatttttcc gaaccaaaca ttgcaagtaa atagtagtga gaaaaaatcc actactaata
      661 acaattctga atacacagtt gttgcaggag atacacttgg acatatcgct gttgataaag
      721 gtgtaacagt taatcaactt aaatcgtgga ataatctttc ttcagattta atattagtag
      781 gtcaaaaatt atctattggt aataaagctt cagcaagtga aagtaatgct tcagaaaaca
      841 attcaacagc aaataattca gccaataata aagtaacaga acaaccgaaa gaagaaaagg
      901 cggctccaac aactcaaaaa tcaacttctt ctaatgaagc atcttcaaac agttcttcag
      961 cacaaggtaa tgtttcaaaa gagttaacgg taactgcgac agcatatagt aaagctgaac
     1021 ctggcatggg ccacatgaca gcgacaggga ttgatttaaa tgataattca agagtaattg
     1081 cagttgatcc atctgttatt cctttaggtt caaaagttta tgttgaagga tacggacaag
     1141 caattgcagc tgatactggt ggtgcaatta aaggtaataa aattgatgta catttaaact
     1201 cagtacaaga agctaacaac tggggcgtaa aacaagttaa agtacaaatt ttagattaat
     1261 tcattccata tagaaagact gtgaatggcg taatgctatt tgcagtcttt ttta
//
LOCUS       DASDYO010000231         1295 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.233, whole genome shotgun sequence.
ACCESSION   DASDYO010000231 DASDYO010000000
VERSION     DASDYO010000231.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1295)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1295)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1295
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.233"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(134..1117)
                     /locus_tag="U0290_002976"
     CDS             complement(134..1117)
                     /locus_tag="U0290_002976"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724621.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="glycosyltransferase family 2 protein"
                     /protein_id="HEM2302996.1"
                     /translation="MEKPFLTVVVPCYNEEEVLSESVTQLTNIIEKLVMSESISDKSQ
                     IMFVDDGSKDRTWELIQQYSESNEHVSGLKLSRNYGHQGALLAGLTEAHAYSDCVVSI
                     DADLQDDVNAIIEFIEKYHEGYDVVYGVRDKRDTDTYFKRNSALAFYRIMSKLGVNMV
                     PNHADYRLLSKRALTEFLRYKEENMFIRGIVPLLGFKSTKVFYNRNERFAGESKYPLK
                     KMVLFAVDGITSFSVAPIRLLLVLGSVIFMIGVVMGIYAIVQKIIGAVVPGWTSLIVS
                     LWLIGGIQLIGIGVLGEYIGKIFKQVKERPRFTIEENVFETKCKENKISER"
BASE COUNT          440 a          263 c          155 g          437 t
ORIGIN      
        1 aatataaata tactcggatg attaaaacta atttctagcg gtttaaaaat gcttatgcaa
       61 agtaagtaac caaaaataag tataaaaaac gcattaaaaa tataagctaa cctattcttc
      121 actctcttta cacctatctc tcgctgattt tattttcttt gcattttgtt tcaaaaacat
      181 tctcttcaat agtaaaacga ggtcgttctt ttacttgttt aaagattttt ccaatgtatt
      241 cacctagaac accaatacca attaattgaa ttccgccaat taaccacaag gaaacaatta
      301 aagatgtcca accaggtaca acagcaccaa tgattttttg aacaatggca taaatcccca
      361 ttactacgcc tatcataaaa ataacagatc caaggactaa taataatcga atgggtgcaa
      421 cactgaaaga tgtaattcca tccacagcaa ataaaaccat tttcttaagt ggatattttg
      481 attctcctgc aaatctctca tttcgattgt aaaatacttt cgtagatttg aaacctaata
      541 atggtacaat gcctcgaata aacatgtttt cttctttata acgtaagaat tctgttaatg
      601 cacgcttgct aagcagtcga tagtccgcat gatttggaac catattaact cctagtttgc
      661 tcataattct atagaaagct aacgctgaat ttcttttgaa gtaagtgtca gtgtcacgtt
      721 tatctcgtac gccataaacg acatcgtaac cttcatgata tttttctata aactcaataa
      781 tcgcattcac atcatcttgt aaatcagcat caatagacac gacacaatct gaatatgcat
      841 gtgcttctgt taagccagca agtaaagctc cttgatgtcc ataattccga cttaatttta
      901 gtccagatac atgttcattt gattctgagt attgctgtat aagttcccaa gttctatctt
      961 tacttccatc atctacaaac ataatttgac ttttgtcact gattgattca ctcatcacta
     1021 atttttctat aatatttgtt agttgtgtaa cactctcgct cagaacttct tcttcattat
     1081 aacaaggtac cacaactgtt aaaaatggct tttccactct cactacaacc ccttattgat
     1141 atgctattct ataaaattca gtatctacag catatcttat ttacaacagt ttatcaacta
     1201 tctatgtaaa aataatcaag tatacagcca atatagacct ctttccaata gcaaaaaccc
     1261 tccaaattat agaaactttt gccaagtatg attta
//
LOCUS       DASDYO010000232         1289 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.234, whole genome shotgun sequence.
ACCESSION   DASDYO010000232 DASDYO010000000
VERSION     DASDYO010000232.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1289)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1289)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1289
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.234"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            38..187
                     /gene="llsA"
                     /locus_tag="U0290_002977"
     CDS             38..187
                     /gene="llsA"
                     /locus_tag="U0290_002977"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_071661762.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="listeriolysin S"
                     /protein_id="HEM2302997.1"
                     /translation="MNIKSQSSNGYSNNAVGSEAMNYAAGCCSCSCSTCTCTCTCASS
                     AATKM"
     gene            252..1139
                     /locus_tag="U0290_002978"
     CDS             252..1139
                     /locus_tag="U0290_002978"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003771339.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter ATP-binding protein"
                     /protein_id="HEM2302998.1"
                     /translation="MNNILETKNLKVTINNKVILYLDKEVCISEKDKVAILGDNGAGK
                     TTLVNSILGEKNSSGEITKKFKKNDCGVVFQENAYNDLMKVYELITLVLPHLKKKERA
                     QFLHKYELESLRKKYIKDLSGGEKQRLTLCLVLESHKKLYIFDELTSGLDYKKRLGLL
                     ALMKEKTKDATVINITHYFEEVENWATKVLILQKGILLFWGTISEFFSNFPHYSVIKV
                     DQIELTKIDETDMTFMQSTDTGDGIAVICSDLQIQEETKKILDKKNVTYNTIKQNIYT
                     TYLVAYLRGTSSSEQEVLI"
     gene            1139..>1289
                     /locus_tag="U0290_002979"
     CDS             1139..>1289
                     /locus_tag="U0290_002979"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014654230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC transporter permease"
                     /protein_id="HEM2302999.1"
                     /translation="MSYLWTSIKMQFRIPVSVFFSLLFPLIMMFAMVTSYGNFDIGEG
                     YHFVDK"
BASE COUNT          492 a          160 c          236 g          401 t
ORIGIN      
        1 gataatttat tccaaaaaat aaaaaggagg catttgaatg aatattaaat cacaatcatc
       61 aaatggctac agtaataatg ctgtaggctc tgaagcaatg aactatgcag ctggatgttg
      121 ctcatgttct tgttcaactt gcacatgtac atgtacatgc gcatcatctg ctgcaaccaa
      181 aatgtaaatt ttagaatgaa aaagggatac atttgtgtcc cttttcaata agttatgagg
      241 tgcatgtgca tatgaataat attttggaaa cgaaaaattt gaaagttaca ataaataata
      301 aagtaattct atatttagat aaagaagttt gtatttcaga aaaagacaaa gttgccattc
      361 taggagacaa tggagctggg aaaaccacgt tagtaaatag tattcttggt gaaaagaact
      421 cttctggaga aattaccaaa aagtttaaaa aaaatgactg tggtgtagtg tttcaagaaa
      481 atgcatataa tgatttgatg aaagtttatg aattgattac tttagttctg ccacatctaa
      541 agaaaaaaga gagagcgcag tttttacaca aatatgaact tgaaagtttg agaaaaaagt
      601 acattaaaga cttatctggt ggagaaaaac aacgactaac actatgttta gtactagaaa
      661 gtcataagaa attatatatc tttgatgagt taacttcagg attagattat aagaagagac
      721 taggtttact tgctttgatg aaagaaaaaa ctaaggacgc gacggtgata aatataacgc
      781 attactttga ggaagttgaa aactgggcaa cgaaagtttt gattcttcaa aaaggaattt
      841 tacttttttg gggaacaata tcagaatttt tctctaattt tcctcattat tctgttatta
      901 aagtagatca aatcgaacta acaaagatag atgaaacaga tatgactttt atgcaaagca
      961 cagatacagg tgacgggata gcagttattt gttcggattt gcaaattcag gaagagacaa
     1021 agaaaatttt ggataaaaaa aacgtcacat acaacacaat aaaacaaaat atatatacaa
     1081 cttatttagt tgcatatttg cgcggaacat caagcagtga acaggaggta ctgatataat
     1141 gagttattta tggacaagta ttaaaatgca atttagaatt ccagtatctg tgtttttctc
     1201 attattattt ccactaatca tgatgttcgc tatggttact tcttatggaa actttgatat
     1261 tggtgaaggt tatcattttg tagataaat
//
LOCUS       DASDYO010000233         1263 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.235, whole genome shotgun sequence.
ACCESSION   DASDYO010000233 DASDYO010000000
VERSION     DASDYO010000233.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1263)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1263)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1263
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.235"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..718)
                     /locus_tag="U0290_002980"
     CDS             complement(<1..718)
                     /locus_tag="U0290_002980"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303000.1"
                     /translation="MSEIQHFSEFIDGATNYWYENKFDRCNACDMVNVMLTVFDGDIS
                     TPGNQSNKIPRRISVSAKVYDVDRWNQSREELIELLNWVSGDLFEMSFEKNEELFDAF
                     PLELPSPRKECITLFSGGLDSFAGSYYNFLNNISSDYVGYVNKAEERTYQKRLQSFYR
                     KIFSAGGSEVDIRNKYQKPKIFYFQSTRSLLYLSLAISKAISNSVKEIRMYENGILSL
                     NPEFGRYTTKTTHPKTIFLYN"
     gene            complement(718..>1263)
                     /locus_tag="U0290_002981"
     CDS             complement(718..>1263)
                     /locus_tag="U0290_002981"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463841.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303001.1"
                     /translation="LHLPEITSTIKTGFIEKEISEQVYQSIIGVVSGKLSKIYDLDED
                     KCKEITSDFIKREQWINEIMELVEQDNVTGISDVLLKALKIALGETVKAEQNETYFVE
                     KLLYEIIFLSLENTMQGALETLEEGITIPQIRKEFIKPLADKLFEEDIKTEIPALVLG
                     KTTLAVINNKIADKLKNFGGF"
BASE COUNT          395 a          233 c          167 g          468 t
ORIGIN      
        1 tattgtagag aaaaattgtc ttaggatgtg tagtttttgt tgtgtatctg ccaaattcag
       61 ggtttaaaga tagtatacca ttttcataca ttctaatttc tttgacagaa ttagaaatag
      121 cttttgatat tgctagggat aaatatagta aagatctagt tgattgaaag tagaaaattt
      181 taggcttttg atatttattc ctgatatcaa cctcactacc acctgcagaa aaaatctttc
      241 tataaaaaga ctgtaagcgc ttttggtatg ttctttcctc ggctttatta acatatccta
      301 cataatcact tgaaatatta tttaagaagt tgtaatagga gcctgcaaaa gaatctaatc
      361 cacctgaaaa tagtgtgata cactcttttc gaggacttgg gagttctaat ggaaaggcgt
      421 caaatagttc ttcatttttc tcaaaagaca tctcaaatag gtctcctgat acccaattaa
      481 gtaattctat taattcctct ctagattgat tccaacgatc cacatcatat acttttgcag
      541 atacagatat cctccgagga attttattac tttggttacc tggtgtagaa atatctccat
      601 cgaacactgt taacataacg ttaaccatat cacatgcatt acagcgatca aatttattct
      661 cataccaata atttgtagcc ccatctataa actctgaaaa atgttggatt tcactcatta
      721 aaagccacca aaatttttta acttatcagc gattttatta tttattacag ctaaagttgt
      781 tttacctaat actaaagctg gaatttctgt ctttatatct tcctcaaata gcttatcagc
      841 aagaggtttt ataaactctt ttcgaatttg tggaatagtt atcccttcct ccaaagtttc
      901 caaagctcct tgcatagtgt tttctaaaga taaaaaaatg atttcataca atagtttctc
      961 tacaaagtaa gtttcatttt gttcagcttt aacagtttct cctagcgcta tttttaaggc
     1021 cttcaacaaa acatctgata ttccagttac attatcctgt tcaaccaact ccattatctc
     1081 atttatccat tgttctcttt taataaaatc acttgtaatc tctttacact tatcttcatc
     1141 taggtcataa atctttgaaa gcttcccgct tacaacacct ataatacttt gatagacttg
     1201 ttccgaaatt tctttttcaa taaaaccagt ttttattgtg cttgttattt ccggcaagtg
     1261 tag
//
LOCUS       DASDYO010000234         1246 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.236, whole genome shotgun sequence.
ACCESSION   DASDYO010000234 DASDYO010000000
VERSION     DASDYO010000234.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1246)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1246)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1246
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.236"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>1246
                     /locus_tag="U0290_002982"
     CDS             <1..>1246
                     /locus_tag="U0290_002982"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014929206.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2303002.1"
                     /translation="KRKISSIIVVGIMFFQSLTTYPFITEAKENEQKEEINKPSKITK
                     GLTNSLKYTKTILETGDTYDSVFPDSALAKVVAKEATGSENTTQLVTQADLNKIKSLN
                     GYNKGISVLTGIDLLVNVTSISLNNNQVTDISPIDQLPNLVSLSVKNNQISSLILNAQ
                     NQLPKLTTIDIENNPDLNTIDIQDQPQLVDVKTSGYTGLRKLTTVIAKNNPELVNLGQ
                     YTIRNVYFSQVASLTKVELVNLPKVRKVNLERNSINELKVTDLAIEDLPLGENELTDT
                     VFDNIQNLPNLKTLDLSKNQLEEVVLDKTDVENLPNLMTLNIQQNLAIKLINVQDQPQ
                     LVDVKTSDYKELSALTTVIAKNNPELVNLGYPIMQNVYFSQVASLTKVELANLPKVRA
                     VRLERNSINQIELNNFVSVKDVN"
BASE COUNT          504 a          213 c          196 g          333 t
ORIGIN      
        1 aaaagaaaga taagttctat cattgtagtc gggataatgt tctttcaatc attaactacg
       61 tatccattta tcaccgaagc caaagaaaat gaacaaaaag aagaaataaa taaaccctca
      121 aaaataacta agggattaac taattcccta aaatacacta agacaattct tgaaacaggg
      181 gacacctatg atagtgtatt tcctgacagt gctttagcta aagtagttgc taaagaagca
      241 acggggtcag agaatacaac tcagctagta acacaagctg acctgaataa aatcaaatct
      301 ctcaatggtt ataataaagg aattagcgta ttaacaggaa tcgatttgct agtcaatgtg
      361 acaagtataa gcttgaataa taatcaagta acagacattt ctccaataga tcaattacct
      421 aatttagtaa gcctatcggt aaaaaacaat caaattagca gtcttatctt aaatgcgcaa
      481 aatcaactcc cgaaactaac aaccattgat attgaaaata atcctgatct taatactatc
      541 gatatccaag atcaacccca attggtagat gtaaagacat ccggttatac aggattacgc
      601 aagttaacaa cggtaattgc caaaaacaat ccagaattag tcaatttagg ccaatacact
      661 atccgaaatg tctactttag ccaagtagca agtttaacga aagttgaact agtcaatctc
      721 cctaaggtaa gaaaagtaaa ccttgagagg aacagtatta atgagctaaa agttactgat
      781 ttggccattg aagatctgcc attaggagaa aacgaattaa cagatacagt atttgataac
      841 atccaaaatc tgcctaattt aaaaacgtta gatctgtcaa aaaaccaact agaagaagtt
      901 gtattagaca aaacggatgt agaaaatcta cccaatttga tgacactaaa tatacaacaa
      961 aatttggcta taaaattgat aaatgttcaa gaccaacccc aattggtaga tgtaaaaact
     1021 tctgattata aagaattatc tgcgttaaca acagtaattg ccaaaaataa tccagaatta
     1081 gttaatttag gttatcccat tatgcaaaat gtttacttta gccaggtggc aagtttaacg
     1141 aaagttgaac ttgctaacct tccaaaagta agagcagttc gattggaacg taatagcatc
     1201 aatcagattg aactaaataa tttcgtttca gtaaaagacg tgaatc
//
LOCUS       DASDYO010000235         1231 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.237, whole genome shotgun sequence.
ACCESSION   DASDYO010000235 DASDYO010000000
VERSION     DASDYO010000235.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1231)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1231)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1231
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.237"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..407)
                     /locus_tag="U0290_002983"
     CDS             complement(<1..407)
                     /locus_tag="U0290_002983"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464937.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2303003.1"
                     /translation="MNKQNELQSVLSNKKKVLIIGPNGAGKSTFAAKLGKCYDFEVCH
                     LDKLFWLENWNAVEKADFEDKVNGILRSEKKYIIDGDYFFNLEKRLEHADLVIWIKIP
                     LFLCVANIVKRRFKYMTNARPDVTEGCDEKLNLS"
     gene            complement(447..674)
                     /locus_tag="U0290_002984"
     CDS             complement(447..674)
                     /locus_tag="U0290_002984"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464936.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2303004.1"
                     /translation="MAIVLRLDRVMADRKMSLNQLSQEVGVANVNLSKIKTGKVSAIR
                     FSTLNEICRVLNCQPGDILEYVADDSLETEL"
     gene            complement(689..1159)
                     /locus_tag="U0290_002985"
     CDS             complement(689..1159)
                     /locus_tag="U0290_002985"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003721915.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF2975 domain-containing protein"
                     /protein_id="HEM2303005.1"
                     /translation="MTIIVVLMKFFSSKNIMMNKLESDTVFYFQTEFFSGVENQQYNQ
                     IEEWILVVIAAFSSVLIALLLWTASMIFKDLAAEFMPFSDLTVNRLRRIAGILLVYSL
                     APQIMYSVLHTVLIPGYSITFGLNMSFFFAIIFYCLTEIFRYGASLQKESDETL"
BASE COUNT          426 a          235 c          155 g          415 t
ORIGIN      
        1 gataaattta atttttcgtc acagccttca gttacatctg gtcgcgcatt cgtcatgtat
       61 ttaaatcttc ttttaactat atttgctaca cacagaaaca atggaatttt tatccaaata
      121 actaaatctg catgttcgag tcttttctcc aaattaaaga aataatcacc atctataata
      181 tacttttttt cagaacgcag aattccgttc actttatcct cgaaatccgc tttttcaact
      241 gcattccaat tctccagcca aaaaagctta tctaaatgac agacttcaaa atcataacat
      301 tttccaagtt ttgcagcaaa agttgactta ccagcgccgt taggaccaat tattaatact
      361 tttttcttgt tagataatac agattgcaat tcattttgtt tattcattta cgcgctcctt
      421 atctaagtat ggctaatcta acgcatttaa agttcggttt caagagaatc atccgctaca
      481 tactccaaaa tatcacctgg ttggcagttt aagactctac atatttcatt tagagtagaa
      541 aaacgaatgg cgcttacttt accagttttt attttggata agtttacatt tgctacacca
      601 acttcttggg ataactggtt taaagacatt ttacggtcgg ccattactcg atctagcctc
      661 aatacaattg ccattttttt cgctccaatc ataaagtttc gtcggattct ttttgcaaag
      721 atgctccata acgaaatatt tcagttaaac aataaaaaat aattgcaaag aaaaatgaca
      781 tattcaaacc aaaagtaatg ctataacccg gtatgagtac tgtatgtaaa acagaataca
      841 taatttgcgg tgctagcgaa tagacaagca atatccctgc aattctccgc aatctgttaa
      901 cagtaagatc gctaaaaggc ataaactcag cagctaaatc tttaaaaatc atacttgcgg
      961 tccatagtag caatgctatt aaaacactag aaaaagcagc tataactact aaaatccatt
     1021 cctcaatttg attatattgt tgattttcca caccagaaaa aaattctgtt tgaaaataaa
     1081 atacagtatc cgattctaat ttattcatca taatattttt actactaaaa aacttcatta
     1141 aaacaactat tatagtcatt attaccgaac tgatcgataa aattttaagt gcaatatgta
     1201 gaaaataact tactttttgt aatcgtttta a
//
LOCUS       DASDYO010000236         1229 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.238, whole genome shotgun sequence.
ACCESSION   DASDYO010000236 DASDYO010000000
VERSION     DASDYO010000236.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1229)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1229)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1229
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.238"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            143..1090
                     /locus_tag="U0290_002986"
     CDS             143..1090
                     /locus_tag="U0290_002986"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sugar-binding transcriptional regulator"
                     /protein_id="HEM2303006.1"
                     /translation="MKWEEKRDMVKIATWYYHYGWTQAQIAKKIGISRSIISKTLQRA
                     KDLGIVEIFIKDETYYTVDLEQKLEEKFGLEEAIVVATHDMSEEEALNFLAKEAAYTL
                     SKRIAKVKTLGISWGKTIRKFANEFPFIPHKDLTIIPLIGGMGSSDIDLHSNQICYDL
                     KKKMKCHSKYLYAPALVEDTEMKTDLSKNKYISEVLEEGKTVDMAIVGVSSPYNHSTM
                     EEIGYINSEDIEELRYKDVVGDINSRFFTADGKEAKTEINTHVIGLSLEELKNIPTVV
                     ALANGLQKKEALVAALNAGLIDVIVITDRMAEYILQKND"
BASE COUNT          455 a          205 c          229 g          340 t
ORIGIN      
        1 aaattactcc tttttcggca aaaacgatgt tcctatctac cccaactttt cataaagcaa
       61 attctatgat actattagca taaaaacatt tgtgacatcg tataactttt gttccattat
      121 gatgtaaatg gaggtaagta gaatgaaatg ggaagaaaaa agagatatgg tgaaaatcgc
      181 tacgtggtac tatcactacg gctggaccca agcgcaaatc gccaaaaaaa tcgggatttc
      241 aagatccatt atctctaaaa ctttgcaacg cgcaaaagac ttaggcattg tggaaatctt
      301 tattaaagac gaaacttact atacggtaga tttagaacaa aaattagaag aaaagtttgg
      361 tttagaggaa gcgattgtcg ttgcaacgca cgatatgtct gaggaagaag cactgaattt
      421 ccttgccaaa gaagctgcct atacactgag taaaaggatt gctaaagtaa aaactctcgg
      481 gatttcatgg gggaaaacaa ttcgcaaatt tgctaatgaa ttcccattca tcccgcataa
      541 agacttaaca attattccgc ttataggtgg aatgggctcg agtgatattg atctgcattc
      601 caatcaaatt tgttatgatt taaagaaaaa aatgaaatgc cactccaaat atttgtatgc
      661 gcctgcgctc gttgaagata cggaaatgaa aaccgattta tccaaaaaca aatatattag
      721 cgaagtatta gaagaaggaa aaacggttga tatggctatt gtcggtgtat cgagccctta
      781 taatcacagc acaatggaag aaatcggcta tattaattct gaagatattg aagaactacg
      841 ctataaagat gttgtcggtg atattaattc acgctttttc acagcagacg gaaaagaagc
      901 aaaaactgag attaacaccc atgtaatcgg tcttagtcta gaggagttga agaacatccc
      961 caccgtcgtc gcacttgcaa acggattaca aaaaaaagaa gcattagtgg cagctcttaa
     1021 tgccggattg atagatgtga ttgtgattac tgatagaatg gccgaataca ttcttcaaaa
     1081 aaacgactaa aaaataatcc taactataaa atttaaaata tccaaaagct ctctcccgca
     1141 aaggaatgag ctttttttat ttctcaaaaa ataaaaaaag ctaatatttc attgacgaaa
     1201 aaatgttaaa gtgttatatt taatttgtg
//
LOCUS       DASDYO010000237         1178 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.239, whole genome shotgun sequence.
ACCESSION   DASDYO010000237 DASDYO010000000
VERSION     DASDYO010000237.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1178)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1178)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1178
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.239"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            14..679
                     /locus_tag="U0290_002987"
     CDS             14..679
                     /locus_tag="U0290_002987"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464076.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2303007.1"
                     /translation="MEKLFTYKEFVDMMQKYGIRHTKRKLRRGENLMENASKFSNVVL
                     LIDGYISSYTYESPEKLLSIFEPGIFLRYSILEDQPEFVTNIALSDNCEVYEYKKEDI
                     EYALTLFPENFGFQYFFLKRIGRHLYYRALLNGKEHKDKLYYAMKYLGELIGKTDENG
                     NVSLPPEVTLKVLIEYSTLSKAAFYRQRIHLLEQEILKPHENTFIVQKKVASHYEDQL
                     TSI"
     gene            697..>1178
                     /locus_tag="U0290_002988"
     CDS             697..>1178
                     /locus_tag="U0290_002988"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464077.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2303008.1"
                     /translation="MKFNWKVVLLFVLILALIVPVYSKAVETGKELPKSPELQDDKSS
                     TLKNVNTPKNLKASPLTIPANSTIADLFPDEGMAKTVANQLGRTENNNFQTPTKTDWK
                     VDDVVTEVELNRMWYLTSVATIGSIEGIQYLPNLYNVQLQFDDQCKDLSPFLKAPNGY
                     P"
BASE COUNT          432 a          175 c          220 g          351 t
ORIGIN      
        1 ggagtgggct atagtggaaa agttatttac atataaagag tttgttgaca tgatgcaaaa
       61 atatgggatt agacacacga aacgcaagct aagacgtggc gaaaatttaa tggagaacgc
      121 ttctaaattt agtaatgttg ttttactaat agatggttat ataagcagtt atacatatga
      181 atctccagaa aaactcttat ctatatttga accaggtatt tttctacgtt attccatttt
      241 agaagatcag ccagagtttg tgacaaatat tgctctctca gataactgtg aagtatacga
      301 atataaaaaa gaagatattg aatatgcatt aacattattt cccgaaaatt ttggttttca
      361 gtatttcttt ctaaagagaa tcgggcggca tttatattat cgagcattac ttaacggcaa
      421 agagcataaa gataaactat attatgccat gaaatatttg ggagaactca ttggtaaaac
      481 ggatgaaaac ggaaatgttt cgttgccacc agaagtgaca ttgaaagtct taattgaata
      541 cagtacttta tccaaagcag ctttttatag acaacgaatt cacttattgg agcaagaaat
      601 tttaaaaccg catgaaaata cttttattgt tcaaaaaaaa gtagcaagtc attatgaaga
      661 ccagctaact agcatttaaa aggagacata aaaataatga aatttaattg gaaagtagtt
      721 ctgctgtttg ttttaatttt agcacttatt gttccggttt attcgaaggc tgtagaaaca
      781 ggaaaagagt tacctaagag tccggaacta caagatgata agtcatctac gttaaaaaat
      841 gtaaatacac ctaaaaatct gaaagctagc ccgctaacaa ttccagcgaa tagcacgata
      901 gcagatttgt ttcccgatga agggatggca aaaactgtcg caaaccagct aggacgaaca
      961 gaaaataaca attttcaaac acctactaaa acggattgga aagtggatga tgttgttact
     1021 gaggtagagt taaatagaat gtggtactta acttcagttg ctactatagg aagtatcgaa
     1081 ggcattcaat atctacccaa tctttacaat gtacagttac agtttgatga ccaatgtaag
     1141 gatttgtctc cttttttaaa ggcaccaaat ggatatcc
//
LOCUS       DASDYO010000238         1177 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.240, whole genome shotgun sequence.
ACCESSION   DASDYO010000238 DASDYO010000000
VERSION     DASDYO010000238.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1177)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1177)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1177
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.240"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>1177
                     /locus_tag="U0290_002989"
     CDS             <1..>1177
                     /locus_tag="U0290_002989"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_009917295.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="MucBP domain-containing protein"
                     /protein_id="HEM2303009.1"
                     /translation="IASLIVLSSLASQIALTPISALADTHDTNNIALLQNTNENVPYK
                     YTSTLTFPTLTNQTQEDYKLEIKLALPTGMNYTGLQVSVGGEDITNQVGTTSFDNSTN
                     TVTFKFDKVTSWDSLSKAKVKFDWKTSYSGEGGEAKIDSLVATATATSEDKAGNKSTS
                     TGSLKPKDISAPVVKADKTEVTYNLGSNVTEEQFLTDINASVTDNYDSTISLTSNFTS
                     IVNLAVSGDYSVNVQATDKAGNVSNTVNVTVHVATPAPVAGANITVNYLDSDGNKLAE
                     SDTLTGTIDSNYQSTSKKISGYTLETTPKNATGTFTDTPQTVDYIYKKDTVTPTPIVD
                     PVNPVDPVDPVVNKPVIVTPNTDQVTTSNSVEKTTYNSLPKTGDTDQSTATTIFGALL
                     "
BASE COUNT          418 a          251 c          201 g          307 t
ORIGIN      
        1 atcgctagcc ttatagtttt aagttctcta gctagtcaaa tagcacttac acctatttct
       61 gcacttgctg atactcacga tacaaataat attgcattac tacaaaatac caatgagaat
      121 gtcccatata aatacacatc cactcttaca tttccaactt taacgaatca aacccaggaa
      181 gactataaac tggaaataaa attagcccta ccaactggca tgaactatac gggcttgcag
      241 gtttctgttg gtggggaaga cattacaaac caagttggga caactagctt tgacaattcc
      301 actaacactg ttacttttaa attcgacaaa gtaacaagtt gggatagttt atccaaagca
      361 aaagtaaagt tcgactggaa aacttcttat tcaggtgaag gcggggaagc aaaaatcgat
      421 tctttagttg cgaccgcaac agctacaagc gaagacaaag ctggtaacaa atctacctct
      481 actggctctt taaaaccaaa agatattagc gcaccagttg tcaaagcaga taaaacagag
      541 gttacgtata atcttggaag caacgttacc gaagagcaat ttttaacaga cattaatgct
      601 agcgttactg ataattatga ctccactatt agtcttacaa gcaattttac ttccatagtt
      661 aatttagcag tgagtggtga ttactcggtc aatgttcaag caaccgataa agctggcaac
      721 gtctcaaata ctgtaaatgt caccgttcat gtagcaactc cggcacctgt agccggagcg
      781 aacataacgg tcaactatct tgatagcgat ggaaataaac tcgcagaatc agacacattg
      841 acgggaacta tcgatagtaa ttaccaatct acaagtaaaa aaattagcgg gtacactcta
      901 gaaaccacac caaaaaatgc aactggtact ttcactgata ccccgcaaac cgttgattat
      961 atttataaaa aagataccgt taccccaaca cctatagttg atccggtcaa tccagttgac
     1021 ccagttgacc ctgtagtaaa taaaccagtc attgtgacac caaatacgga tcaagttact
     1081 actagtaatt cagtagaaaa aacaacttat aattctttac cgaaaacggg tgatacagat
     1141 caaagtacag caacaactat tttcggagca ttgcttc
//
LOCUS       DASDYO010000239         1172 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.241, whole genome shotgun sequence.
ACCESSION   DASDYO010000239 DASDYO010000000
VERSION     DASDYO010000239.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1172)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1172)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1172
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.241"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            195..479
                     /locus_tag="U0290_002990"
     CDS             195..479
                     /locus_tag="U0290_002990"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726995.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3130 family protein"
                     /protein_id="HEM2303010.1"
                     /translation="MTKIRINKEKMINHATTLGDSAGKLDYYPLKNENMSYTQTNSIH
                     LLRESLLELLEGIENLGTVAQDDATRIKQMGEAFAKQDKSISQKMNLEVR"
     gene            521..832
                     /locus_tag="U0290_002991"
     CDS             521..832
                     /locus_tag="U0290_002991"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724756.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303011.1"
                     /translation="MEREDDALYAIKNKIRHLEDMEEDIHQARREIDDILYHMKEVWR
                     GEHAEHTFWQIEDEVNHYNRRTACMTNDIHTELNNEQKKHRQNLHALETKQQDIKKEM
                     T"
     gene            835..975
                     /locus_tag="U0290_002992"
     CDS             835..975
                     /locus_tag="U0290_002992"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303012.1"
                     /translation="MATKPTVENLYIAGTKQLTGFGREYEYLLQHGYTYDVKTSTMKL
                     KK"
     gene            987..>1172
                     /locus_tag="U0290_002993"
     CDS             987..>1172
                     /locus_tag="U0290_002993"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464646.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303013.1"
                     /translation="MKLDDNVKEIILKKSEFLLHNNFKLIEITDATITFSNKKIAFVI
                     GYERYDNVSNINIKFLEE"
BASE COUNT          476 a          180 c          208 g          308 t
ORIGIN      
        1 tctcatttct atccgtcaga gaaaagttga ctttaactaa atgatattga tttttgcatt
       61 tcagatcata aagaatattc tttgacatca attatttaca atgccatttt caatgctact
      121 aaatgacaat ccaagaaaat gtcattataa tagaaccatg atacaacctt cacatacaga
      181 aagggaaaac aaccatgaca aaaattcgta ttaataaaga aaaaatgatt aatcatgcca
      241 caaccctagg tgatagtgcg gggaaattag attactatcc tttgaaaaat gaaaacatga
      301 gttatacgca aactaattct atccaccttc ttcgagaatc attacttgaa ctacttgaag
      361 gcatcgaaaa tttagggact gttgcacaag atgatgctac tcgaatcaag caaatggggg
      421 aagcttttgc aaaacaagat aaatccatca gccagaagat gaatttggag gtgcgttaag
      481 tggataaacg tacccaagaa ttaggtgaaa taaaaaaaaa atggagcgag aagatgacgc
      541 tctatacgcg attaaaaata aaattagaca tttagaggat atggaagaag atattcatca
      601 agctagacgc gaaatcgatg acatccttta ccatatgaaa gaagtttggc gaggagaaca
      661 tgcagagcat actttttggc aaatagaaga cgaggtaaat cattacaacc ggagaactgc
      721 ttgcatgact aacgatattc ataccgaact aaataatgag caaaaaaagc atcgacaaaa
      781 tctccacgcg ctcgaaacta aacaacagga tattaaaaag gagatgacgt agctatggct
      841 acaaagccga ctgtagaaaa cttatacatc gctgggacta aacaacttac gggttttggg
      901 cgtgaatatg aatacttact acaacatggt tatacttatg atgtaaaaac aagtacaatg
      961 aagttgaaga aatgaggaat tcaagcatga aattagacga taatgtaaaa gaaataatcc
     1021 ttaaaaaaag tgaatttcta ctccataata attttaaatt aatagaaata acggatgcta
     1081 ctatcacatt ttcaaacaag aaaattgctt ttgtcatcgg ttatgaaaga tatgataatg
     1141 taagtaatat taatataaag tttttggaag aa
//
LOCUS       DASDYO010000240         1170 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.242, whole genome shotgun sequence.
ACCESSION   DASDYO010000240 DASDYO010000000
VERSION     DASDYO010000240.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1170)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1170)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1170
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.242"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            141..214
                     /locus_tag="U0290_002994"
     tRNA            141..214
                     /locus_tag="U0290_002994"
                     /product="tRNA-Thr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:175..177,aa:Thr,seq:cgt)
     gene            224..307
                     /locus_tag="U0290_002995"
     tRNA            224..307
                     /locus_tag="U0290_002995"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:258..260,aa:Tyr,seq:gta)
     gene            319..390
                     /locus_tag="U0290_002996"
     tRNA            319..390
                     /locus_tag="U0290_002996"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:351..353,aa:Gln,seq:ttg)
     gene            400..472
                     /locus_tag="U0290_002997"
     tRNA            400..472
                     /locus_tag="U0290_002997"
                     /product="tRNA-Lys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:433..435,aa:Lys,seq:ttt)
     gene            complement(588..>1170)
                     /locus_tag="U0290_002998"
     CDS             complement(588..>1170)
                     /locus_tag="U0290_002998"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465655.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="Crp/Fnr family transcriptional regulator"
                     /protein_id="HEM2303014.1"
                     /translation="TRIPSNMILLTEDTINTKVYFIEKGIVSLEKNKNVISFLGSNQI
                     AGLNDYFMAEANLYTARVIETIAAYEFDKEDIICSIIGMQEGWLYLYLNNRNHENVLI
                     EKCNLMRGNGENRLKESLEQLGRYFGNEKEGVLRIPKCFTKKIIANYSNLSVRSVTHL
                     CRKLVESGFLAENSKSFVLLDKYGRIEPEVTTI"
BASE COUNT          355 a          228 c          186 g          401 t
ORIGIN      
        1 acaacttcaa aaatattttt cacttttttt aaaaaaaagc tggtaaaatt gattaaaatg
       61 ttatatcatg tattagtatc tgttttgaag aattaattat gcaagagatt tcgatttgcc
      121 agcagtgaga gcgattcttc gccgacttag ctcaatctgg tagagcaact gaatcgtaat
      181 cagtaggttg cgggttcaat tcctgcagtc ggcattttat agcggagggg tagcgaagtg
      241 gctaaacgcg gcggactgta aatccgctcc ttcgggttcg gtggttcgaa tccactcccc
      301 tccaccattt tctattattg ggctatagcc aagcggtaag gcaacggatt ttgattccgt
      361 catgcgctgg ttcgaatcca gctagcccag tcatatttag agccgttagc tcagttggta
      421 gagcatctga cttttaatca gagggtcgct ggttcgaacc cagcacggct catcataaaa
      481 aaacaagcaa agaaaatact ttgcttgttt ttttatgatg taattttttc tccctaagaa
      541 aaaagataaa ctaaaaatta aatagtttat cttttactca agtataatta tatcgtagtt
      601 acttctggtt ctattcttcc gtatttatcc aacaaaacaa aagacttaga attttctgct
      661 aaaaaacctg attcaaccaa ctttctacaa agatgagtta ctgaacgcac cgataagtta
      721 gaataattag caataatttt ctttgtgaaa cattttggaa tgcgtagcac gccttccttt
      781 tcatttccaa aatatcttcc cagctgctct agagactctt tcaaacgatt ttctccatta
      841 ccacgcatta aattacattt ttcaattaaa acattttcgt gatttcgatt attaagatat
      901 aaatagagcc acccctcttg catcccaata atcgagcaaa ttatatcttc tttatcaaat
      961 tcgtatgctg caattgtttc gataactcta gcagtgtata gatttgcttc tgccataaaa
     1021 taatcattca atccagcaat ttggtttgat cccaaaaaac ttataacatt tttattcttc
     1081 tctaatgaaa ctatcccttt ttcaataaaa taaacctttg tatttattgt atcctctgtt
     1141 agtaaaatca tgttgctcgg tatccttgtt
//
LOCUS       DASDYO010000241         1144 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.243, whole genome shotgun sequence.
ACCESSION   DASDYO010000241 DASDYO010000000
VERSION     DASDYO010000241.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1144)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1144)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1144
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.243"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..281
                     /locus_tag="U0290_002999"
     CDS             <1..281
                     /locus_tag="U0290_002999"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734895.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2303015.1"
                     /translation="GTIESQPYMKIYATGDVTLNISGNTFVFKDIDEYIELDCENLMV
                     YKTVNDVIATADNKMFTPDFPVLNVGENYFDWIGNIEKIEVNPYWRYV"
     gene            281..>1144
                     /locus_tag="U0290_003000"
     CDS             281..>1144
                     /locus_tag="U0290_003000"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003743964.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="phage tail protein"
                     /protein_id="HEM2303016.1"
                     /translation="MIPILYESKNTDFENNGLGLLKDIITATVDETLNGPCELTIEYP
                     VTARLFDKISDESIFKVKSNEVQNFQLFRAYNIVRDEFTSSIIVKAKHITNDATSNFV
                     EDFTVENITPGAALNKLFSSTAYPSKFSGTSDIATLSSTSIQRKNPLEIIAGVEGSLL
                     DTWGGELVRDNFSIKLLKRRGRDKVASIRYRKNLTGLETDVDTENVITRIYPFANKQD
                     SNGNEQTIVLPEKYIDSEHINAYSNVKILAVDYSSDDTVTDVTTLRNVAGKYFMNNKT
                     DIPEMNIKVSFE"
BASE COUNT          415 a          162 c          219 g          348 t
ORIGIN      
        1 aaggaactat agaatcacag ccttatatga aaatttatgc gaccggagat gttactttaa
       61 acatttcagg aaataccttt gtttttaaag atattgatga atatatagag cttgattgtg
      121 aaaatctgat ggtgtacaag acagtgaatg atgttattgc cacagctgac aataaaatgt
      181 ttactcctga ttttccggtg cttaatgtag gagaaaatta tttcgattgg attggaaata
      241 tagagaaaat cgaagtcaat ccttattgga ggtatgtgta atgataccaa ttttatatga
      301 gtcaaaaaat acagattttg aaaataatgg attaggtcta ctaaaagaca ttatcactgc
      361 aacagttgac gaaacattga atggaccgtg tgagttgaca attgaatatc ctgtaacagc
      421 aaggctattc gataaaataa gtgacgagtc tattttcaaa gtaaagtcaa atgaagtgca
      481 aaattttcag cttttccgag catacaatat agtgcgtgac gaatttacca gctccattat
      541 agtgaaggct aaacatatta caaatgatgc tacttcaaat tttgtagaag atttcacggt
      601 cgaaaatatt acaccaggtg ccgcattaaa taaattgttt tcttctactg cttatccttc
      661 taaattttct ggaacgtcag acatcgctac gttatcaagt actagtatac aacgaaaaaa
      721 tccccttgaa attattgcgg gagtcgaagg ctctctcttg gatacatggg gaggggagtt
      781 agttcgtgat aactttagta taaaactatt aaaacgacgt gggagagata aagttgcatc
      841 tattagatac cggaaaaatt taactggatt agaaactgat gtagatacgg aaaatgtaat
      901 tactcgaatt tatccattcg cgaataagca agattcaaat ggtaatgagc aaacgattgt
      961 attgcctgaa aaatatatag atagtgaaca tattaatgca tattcgaatg taaaaatctt
     1021 ggcagttgat tactcatctg atgacacagt gacagatgta acaacacttc gaaatgtagc
     1081 gggtaaatat tttatgaata ataagacaga tataccagaa atgaatatca aagtatcttt
     1141 tgag
//
LOCUS       DASDYO010000242         1114 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.244, whole genome shotgun sequence.
ACCESSION   DASDYO010000242 DASDYO010000000
VERSION     DASDYO010000242.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1114)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1114)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1114
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.244"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>1114
                     /locus_tag="U0290_003001"
     rRNA            <1..>1114
                     /locus_tag="U0290_003001"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          318 a          224 c          343 g          229 t
ORIGIN      
        1 cggcggaaca cgtgaaattc cgtcggaatc cgggaggacc atctcccaag gctaaatact
       61 ccctagtgac cgatagtgaa ccagtaccgt gagggaaagg tgaaaagcac cccggaaggg
      121 gagtgaaaca gttcctgaaa ccgtgtgcct acaagtagtt agagcccgtt aatgggtgat
      181 agcgtgcctt ttgtagaatg aaccggcgag ttacgatttg ttgcaaggtt aagcggaaaa
      241 agcggagccg tagcgaaagc gagtctgaat agggcgcata agtaacaggt cgtagacccg
      301 aaaccaggtg atctacccat gtccaggatg aaggtaaggt aatacttact ggaggtccga
      361 acccacgcac gttgaaaagt gcggggatga ggtgtgggta gcggagaaat tccaatcgaa
      421 cttggagata gctggttctc tccgaaatag ctttagggct agcctcgagg taaagagtca
      481 tggaggtaga gcactgtttg gactaggggc ccttctcggg ttaccgaatt cagataaact
      541 ccgaatgcca tgtacttata ctcgggagtc agactgcgag tgataagatc cgtagtcgaa
      601 agggaaacag cccagaccac cagttaaggt ccccaaatat atgttaagtg gaaaaggatg
      661 tggggttgct tagacaacca ggatgttggc ttagaagcag ccaccattga aagagtgcgt
      721 aatagctcac tggtcgagtg accccgcgcc gaaaatgtac cggggctaaa catattaccg
      781 aaactgtgga tgaacctctt tagaggttcg tggtaggaga gcgttctaag ggcggtgaag
      841 tcagaccgga aggactggtg gagcgcttag aagtgagaat gccggtatga gtagcgaaag
      901 aagggtgaga atcccttcca ccgaatatct aaggtttcct gaggaaggct cgtccgctca
      961 gggttagtcg ggacctaagc cgaggccgat aggcgtaggc gatggacaac aggtagagat
     1021 tcctgtacca gtgctaattg tttaaccgat ggggtgacac agaaggatag ggaatcgcac
     1081 gaatggaaat gtgcgtccaa gcagtgagtg tgag
//
LOCUS       DASDYO010000243         1108 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.245, whole genome shotgun sequence.
ACCESSION   DASDYO010000243 DASDYO010000000
VERSION     DASDYO010000243.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1108)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1108)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1108
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.245"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            37..112
                     /locus_tag="U0290_003002"
     tRNA            37..112
                     /locus_tag="U0290_003002"
                     /product="tRNA-Asp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:70..72,aa:Asp,seq:gtc)
     gene            117..189
                     /locus_tag="U0290_003003"
     tRNA            117..189
                     /locus_tag="U0290_003003"
                     /product="tRNA-Phe"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:150..152,aa:Phe,seq:gaa)
     gene            209..292
                     /locus_tag="U0290_003004"
     tRNA            209..292
                     /locus_tag="U0290_003004"
                     /product="tRNA-Tyr"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:243..245,aa:Tyr,seq:gta)
     gene            300..373
                     /locus_tag="U0290_003005"
     tRNA            300..373
                     /locus_tag="U0290_003005"
                     /product="tRNA-Trp"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:332..334,aa:Trp,seq:cca)
     gene            389..461
                     /locus_tag="U0290_003006"
     tRNA            389..461
                     /locus_tag="U0290_003006"
                     /product="tRNA-His"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:422..424,aa:His,seq:gtg)
     gene            491..562
                     /locus_tag="U0290_003007"
     tRNA            491..562
                     /locus_tag="U0290_003007"
                     /product="tRNA-Gln"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:523..525,aa:Gln,seq:ttg)
     gene            568..639
                     /locus_tag="U0290_003008"
     tRNA            568..639
                     /locus_tag="U0290_003008"
                     /product="tRNA-Gly"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:600..602,aa:Gly,seq:gcc)
     gene            659..732
                     /locus_tag="U0290_003009"
     tRNA            659..732
                     /locus_tag="U0290_003009"
                     /product="tRNA-Cys"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:691..693,aa:Cys,seq:gca)
     gene            778..861
                     /locus_tag="U0290_003010"
     tRNA            778..861
                     /locus_tag="U0290_003010"
                     /product="tRNA-Leu"
                     /inference="COORDINATES: profile:tRNAscan-SE:2.0.7"
                     /note="Derived by automated computational analysis using
                     gene prediction method: tRNAscan-SE."
                     /anticodon=(pos:812..814,aa:Leu,seq:caa)
BASE COUNT          278 a          237 c          271 g          322 t
ORIGIN      
        1 aggtcgtagg ttcaaatcct gcccccgcaa tagagtggtt ccgtggtgta ggggttaaca
       61 tgcctgcctg tcacgcagga gatcgcgggt tcaaatcccg tcgggaccgc cattatggct
      121 tggtagctca gttggtagag cacttgattg aagctcaagg tgtcggcagt tcgattctgt
      181 cccaagccac ttttttcttt tttaatatgg aggggtagcg aagtggctaa acgcggcgga
      241 ctgtaaatcc gctccttcgg gttcggtggt tcgaatccac tcccctccac catttttata
      301 ggggcatagt ttaaaggtag aactgaggtc tccaaaacct ccagtgtggg ttcgattcct
      361 actgcccctg ccatatatta aaataatggc ggatgtggcg aagtggttaa cgcacctgat
      421 tgtggttcag gcattcgtgg gttcgattcc catcatccgc cctttttgtt tttaagtcta
      481 atataattgt tgggccatag ccaagcggta aggcaacgga ctttgactcc gtcatgcgtt
      541 ggttcgaatc cagctggccc agttaatgcg gaagtagttc agcggtagaa catcaccttg
      601 ccaaggtggg ggtcgcgggt tcgaaccccg tcttccgctt ttaaattgaa cattgtgcgg
      661 cgccatagcc aagtggtaag gcagaggtct gcaaaacctt tatcaccggt tcaaatccgg
      721 ttggcgcctc catttgcata attaatgttt taaagttata atttattata ttgttacgcc
      781 ggcgtggcgg aattggcaga cgcgctggac tcaaaatcct gtgcccgcaa gggcgtgccg
      841 gttcgacccc ggccgccggt atactatgat accaacgttt ctaacgattc gttggtattt
      901 tttatttcaa agatggattc tgcttgaaag ttgtgttata aataaagacg agaaaaaata
      961 atttagcagg aaaggcgtat atttacatgc tttcaaggat aaattacaaa aaatggaaat
     1021 attacttttc ttgatcaaaa ggaccttttg acggagttta atgacatgtt ataccactta
     1081 caaaaaatta atgatataac tctactta
//
LOCUS       DASDYO010000244         1088 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.246, whole genome shotgun sequence.
ACCESSION   DASDYO010000244 DASDYO010000000
VERSION     DASDYO010000244.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1088)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1088)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1088
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.246"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(252..695)
                     /locus_tag="U0290_003011"
     CDS             complement(252..695)
                     /locus_tag="U0290_003011"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726066.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEM2303017.1"
                     /translation="METILEVVRIEQIIREAEEGVDYIIRSPEDGAKIASRFIGRDDR
                     EVFFVMCLNTKNNVVAVHRCHVGSLNSSIVHPREVFKSAILNNVASVILAHQHPSGDI
                     KPSMEDINVTKRLVEAGKLLGIEVLDHLIVNSDNSFTSLKERGYI"
BASE COUNT          333 a          200 c          162 g          393 t
ORIGIN      
        1 attctatcac acaaattggt tagaaccaat ttaatattga tttaacataa gattaggatt
       61 aattaatatc atgtagttct tttaatttaa cttttatttt tatttttatt atttattttt
      121 cactgttaat gaaaaattta aggttcgatt tgcaaattaa attcctttag gtgatgtttg
      181 aggtctatca tttataagat gtagttctta catctctcat atcttgaaga aaagggagtt
      241 gtttctccct tttaaatata gcctctttct ttcaggctag taaaactgtt atcactattt
      301 actattaggt ggtcaagcac ttcaatgcct agtagctttc cagcttcgac taatctctta
      361 gttacgttaa tatcttccat cgatggtttt atgtcaccac ttggatgctg atgtgcaaga
      421 atgacacttg ctacattatt aagtattgct gatttaaata cctcccgtgg atgaacaatc
      481 gaggaattta acgaaccaac atgacaacga tgaactgcaa caacattatt tttcgtattt
      541 aaacacataa caaaaaacac ttcacgatca tcacgaccaa taaagcgaga cgctatcttt
      601 gctccgtctt ctgggctacg aatgatataa tcaacacctt cctctgcttc tctaataatt
      661 tgttcgatgc gaactacttc taaaatggtt tccatctaga tcaacctctc tatttttttg
      721 acctttttgg tcaccacaga gagaatcttc gcatcgatta atgtcaagtg gcttaagtag
      781 caaagctatc gagtgattcg tatatgtttt gatgaagccc aatgaattag ggtgcgttaa
      841 aagcgttaat tgctttctta cgcaccctta tcctacttgg ctgactcata acatccgaag
      901 aacgaagacc ctttacttaa tcgataattc gtctatgctt tacagacgaa ttagaagatt
      961 ataattggta gagctgaaaa ggaaaaaaac aaaatgtagc ctatttactt gttttttatt
     1021 tgattgatta cactttcttt taaataattt gtccaatcca ttttaaagcc tactggacca
     1081 aattctcc
//
LOCUS       DASDYO010000245         1075 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.247, whole genome shotgun sequence.
ACCESSION   DASDYO010000245 DASDYO010000000
VERSION     DASDYO010000245.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1075)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1075)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1075
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.247"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..129)
                     /locus_tag="U0290_003012"
     CDS             complement(<1..129)
                     /locus_tag="U0290_003012"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEM2303018.1"
                     /translation="MFSILMAIIQITGIFIAIQILTNKVFSIKEGLVTIAIAMLAFP"
     gene            complement(225..386)
                     /locus_tag="U0290_003013"
     CDS             complement(225..386)
                     /locus_tag="U0290_003013"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463582.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cyclic lactone autoinducer peptide"
                     /protein_id="HEM2303019.1"
                     /translation="MKNMNKSVGKFLSRKLEEQSMKVADSSMSKACFMFVYEPKSPFV
                     KMQEKNENK"
     gene            complement(370..984)
                     /locus_tag="U0290_003014"
     CDS             complement(370..984)
                     /locus_tag="U0290_003014"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463581.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="accessory gene regulator ArgB-like protein"
                     /protein_id="HEM2303020.1"
                     /translation="MSNFTAKVPLSERMADVLISKDRWKDDEEGYLKVKYGLEIILIN
                     VMKFALVYGIALVTGLLLQTVTVHLSYLWLRRYSFGLHATKTLNCTLISLMMFVLAPF
                     VFQNIPSNNWIVLGTFGFILLNMFLFAPADTESLPLIGEEHRKTLKRKAMIGTLILTG
                     IALLIPFAEMKTLIMVGSLFQVISINPLTYKLLKRRYRNYEKYE"
BASE COUNT          348 a          205 c          150 g          372 t
ORIGIN      
        1 agggaaggct agcatagcaa ttgctatagt aaccaatccc tctttaattg aaaaaacttt
       61 gtttgttaaa atctggattg caataaaaat acccgttatc tgtataattg ccatcaaaat
      121 actaaacata ttaatcctcc actgtctaaa atatctatgt ttaaatatgt aagtttgcct
      181 tctttttatt ttagcatgaa ttttgatgtt atacagtttt aaatttattt attttcgttt
      241 ttctcttgca ttttcacaaa tggacttttt ggttcgtata caaacatgaa acaagcttta
      301 ctcatagaag aatccgcaac tttcatggat tgttcttcta gttttctaga aaggaattta
      361 ccaactgatt tattcatatt tttcatagtt ccgatacctc cttttcaata gtttgtaagt
      421 aagtggatta atacttatca cctgaaacaa agatcctacc atgattaatg ttttcatctc
      481 tgcgaatggt attagcaacg caattcccgt taaaattagc gtccctatca tcgcttttct
      541 ttttagtgtt ttccggtgtt cttcaccgat taaaggcaaa ctttctgtgt ctgccggagc
      601 gaatagaaac atgttgagca gtataaatcc aaatgtacct aaaacaatcc aattattaga
      661 ggggatattt tgaaaaacaa atggcgcaag cacaaacatc atcaagctaa ttaacgtgca
      721 attcaatgtt ttggttgcat gtaatccaaa agaataccgt ctgagccata aatatgacag
      781 atgtactgtc actgtttgca gtaataaccc tgttactaag gcaataccgt atacgagagc
      841 aaacttcatg acattaatta gaattatttc cagtccatat tttactttta aataaccttc
      901 ttcatcatct ttccagcggt ctttcgaaat cagcacatcc gccattcttt ctgacaaagg
      961 gacttttgca gtaaaattac tcaactaatt cacctccact aatattttac aacgaattta
     1021 cccataataa ccaaaaatgt aatgaaatgt ccgattcttg tcatgaacga ccaaa
//
LOCUS       DASDYO010000246         1064 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.248, whole genome shotgun sequence.
ACCESSION   DASDYO010000246 DASDYO010000000
VERSION     DASDYO010000246.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1064)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1064)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1064
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.248"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            15..>1064
                     /locus_tag="U0290_003015"
     CDS             15..>1064
                     /locus_tag="U0290_003015"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724240.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF262 domain-containing protein"
                     /protein_id="HEM2303021.1"
                     /translation="MDLSQIINGETESHFFGQIVIHVDKKEKAKLIIDGQQRTSTAVI
                     FLAAMRELFTEMYNAGWDDAQFDAQDITTKFIGRYTQTRDERKLILGENDKSYFSNRI
                     QSVSSEQLGLQKATKSQKRINFAYNYFYKKLEEEINSSDFLEDKYGLLKTFFSTFTEK
                     CSVMFVETDDFNEAFIIFETLNARGKDLETADLLKNHLFKIANKKVGEVKKNWKQMLE
                     FIGTVDTTKYIRHFWNSQNVFIREKDLYKEIRKKITTQFEAIIFIDDLVRLSEVYGGM
                     KNPAEDNFFETDSQQVLNDLKRLGAKSFYPIILAMVKKDYGPNEIYEVLSAIEVLVVR
                     NFVISGLVANKYETEF"
BASE COUNT          414 a          114 c          198 g          338 t
ORIGIN      
        1 tagaagactt atggatggac ttaagtcaaa tcataaatgg tgaaactgaa agtcattttt
       61 ttggacaaat tgtaatacat gtagataaaa aagaaaaagc gaaactaata atcgatggtc
      121 agcaaagaac gagtacagca gtcatctttt tagctgcgat gagagagttg ttcacagaga
      181 tgtataatgc aggctgggat gatgcacaat ttgatgcgca ggacattact acgaaattta
      241 tcggtaggta tacacaaact agggatgaga ggaaattaat acttggtgaa aatgataaaa
      301 gctatttttc aaatagaata caatcggttt cttccgaaca actaggtctt caaaaagcaa
      361 ctaaatctca aaaaagaata aattttgctt ataactactt ttataaaaaa ttagaagaag
      421 aaataaattc ttctgatttt cttgaggata aatatggtct tttaaaaaca tttttcagta
      481 cttttacaga aaaatgctca gttatgtttg tagaaacaga tgattttaat gaggcattta
      541 ttatttttga aacattaaat gcaaggggaa aagatttgga gactgctgat ttattaaaaa
      601 atcacttatt taaaattgcc aataaaaagg ttggagaagt taaaaaaaat tggaaacaaa
      661 tgttggaatt tatagggacg gttgatacca cgaagtatat tcgacatttt tggaattctc
      721 aaaatgtatt tattagagaa aaggatttat ataaagaaat tagaaaaaag ataacaactc
      781 aatttgaagc aattattttt atagatgatc tagttagatt atcagaagtt tatggaggaa
      841 tgaaaaatcc tgcagaagat aatttttttg agacggattc tcagcaagtt ttaaatgatt
      901 taaagcgatt aggagcaaaa tcattttatc caattattct agctatggta aagaaagatt
      961 atggccctaa tgagatttat gaggttcttt ctgctattga agttctggtt gtaagaaatt
     1021 ttgttatatc cggattggta gcaaataaat atgaaacaga attt
//
LOCUS       DASDYO010000247         1040 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.249, whole genome shotgun sequence.
ACCESSION   DASDYO010000247 DASDYO010000000
VERSION     DASDYO010000247.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1040)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1040)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1040
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.249"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..477)
                     /locus_tag="U0290_003016"
     CDS             complement(<1..477)
                     /locus_tag="U0290_003016"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465180.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VanZ family protein"
                     /protein_id="HEM2303022.1"
                     /translation="MLRFSGLVMTIALIVYIVFFLLRWLKRREKLEMIIFKTCLYVYA
                     CGVIKYTIFPLMLNAFLIEDTKIFVTGPYMNLIPFNSISEMFIAERESAAFQIVANII
                     MFVPLGMLLPLCYPKLRWKSVFAISFIATVGIELAQLLQDLIYQSPFKFVDIDDVIL"
     gene            complement(495..926)
                     /locus_tag="U0290_003017"
     CDS             complement(495..926)
                     /locus_tag="U0290_003017"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465181.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Lmo1656 family SNX6-recruiting virulence factor"
                     /protein_id="HEM2303023.1"
                     /translation="MNRKMRLLKGLMAFIVGVSIIATPIITVYAASNKVAISMNRRAV
                     NGATNGKYHSLNKGTVKLKVSAKGFGNSNPNSWVTLHKEKFGIDDYFGRVSISSGKNY
                     FYKNKTKEFPTKANAKSSKYYLKAEKAMDWYTVKIEGTISN"
BASE COUNT          349 a          186 c          140 g          365 t
ORIGIN      
        1 cagtattaca tcatcaatat cgacaaactt aaagggcgat tgataaataa gatcctgtaa
       61 taattgagca agttcaatcc cgacggttgc tataaaactt atagcaaaaa cacttttcca
      121 tcttaatttt ggataacata atggtaaaag cattccaagg ggaacaaaca taataatatt
      181 tgcaactatt tgaaaagcag cggattctct ttctgcaata aacatttcac ttattgaatt
      241 aaaaggaatt aaattcatat aagggcctgt tacaaatatt tttgtatctt ctatcaagaa
      301 agcatttaac ataaggggaa aaattgtata cttgattaca ccacaagcat atacatataa
      361 acatgtttta aagataatca tctctaattt ttctcgtctt ttcaaccatc ttaataagaa
      421 aaagacaata tatacaatta aagcgattgt cattactaat ccagaaaatc taagcatgtt
      481 aactctccta attcttagtt actaatggtt ccttcgattt tcactgtgta ccaatccatc
      541 gctttttcag cttttaaata gtatttactt gatttcgcat ttgcttttgt tggaaattct
      601 tttgtcttat ttttataaaa ataattcttt cctgaagaaa tactgactct gccaaaataa
      661 tcatctattc caaatttctc tttgtgcaaa gttacccacg agttggggtt actattcccg
      721 aaacctttag ccgaaacttt caatttaacc gttcctttgt tcaatgaatg atattttcca
      781 tttgtagcac catttacagc tcgacggttc atcgaaatgg ctactttatt acttgctgca
      841 tagactgtaa taattggggt tgctataatg cttacaccta caatgaaagc cattagtcct
      901 tttaataatc tcatctttct gttcatcttg ttgcctcctt tttgtaatca atagttgcaa
      961 tgcaagagta tcataaaaaa gcgatgtata accaaaaatg taatgaaatg tccgattctt
     1021 gtcgtgaacg actagaaaat
//
LOCUS       DASDYO010000248         1027 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.250, whole genome shotgun sequence.
ACCESSION   DASDYO010000248 DASDYO010000000
VERSION     DASDYO010000248.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1027)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1027)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1027
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.250"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..658
                     /locus_tag="U0290_003018"
     CDS             <1..658
                     /locus_tag="U0290_003018"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003721649.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303024.1"
                     /translation="KPDAVNIHPAFAFFLAGSSRGHITQILLLWFLPVLSLLLGADSP
                     IQEYQTGVRNIIINKIGKKAYILQKLAVSFILCFITMLTTLLLNFILVSIVFLGGTYK
                     MGLNGLGSLNTLFDFSIQNPYLADFGFGFMACLMAGMAGLIATSSSLFFLNKKFAYPA
                     AFFIWFLMILPNNSIMFIFQPFTEYGFEIILPIFLVFSLIVLIIVGVLYLYEVKYVKE
                     "
     gene            645..>1027
                     /locus_tag="U0290_003019"
     CDS             645..>1027
                     /locus_tag="U0290_003019"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014931048.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="WxPxxD family membrane protein"
                     /protein_id="HEM2303025.1"
                     /translation="MLKSRYFLLIFSMFLFFSVFWFTQNMDYLSFPKNRELVLIMNGS
                     LYGYISIKSLCLMLVFPYLIFLLLFSKKEQIVALAREKNRLRFYHKILKDTVIATVLF
                     VGLYLSVNLLYSFIFLSNKLLTATH"
BASE COUNT          288 a          161 c          153 g          425 t
ORIGIN      
        1 aaagccagat gcagttaata ttcatcctgc ttttgcattt tttcttgcag gttcaagccg
       61 aggtcatatc actcaaatat tattactttg gttcttacct gttttaagtc tgttactcgg
      121 agcagactcg cccattcagg aatatcagac aggagttcgt aatattatta ttaataaaat
      181 agggaaaaaa gcttatattc ttcaaaaatt agctgtaagt tttattcttt gttttatcac
      241 catgcttaca actttattat taaattttat tttagtttct attgtattct taggtggcac
      301 ttataaaatg gggttaaatg gattaggatc gcttaatact ctatttgatt ttagcattca
      361 aaacccctac ttagcagatt ttggttttgg atttatggct tgcttaatgg ccggaatggc
      421 tggacttatc gccactagct ccagtctgtt ctttttgaat aaaaaatttg cgtatccagc
      481 tgcatttttt atttggtttc tgatgatact tccaaacaat tcaattatgt ttattttcca
      541 accttttaca gaatatggct ttgaaataat tttgcctatt tttctagttt tcagtttaat
      601 agttttgata attgttggtg tcctttactt atatgaggtg aaatatgtta aagagtagat
      661 attttcttct aattttttcc atgttcctct ttttttctgt tttttggttc acacaaaaca
      721 tggattacct aagtttccct aaaaacagag aacttgttct cattatgaat ggtagtttgt
      781 atgggtatat ctcaatcaaa tccctttgct tgatgcttgt tttcccgtat cttatctttt
      841 tactactatt ttcaaaaaaa gaacaaattg ttgctttagc tagagaaaaa aaccgtttac
      901 gattctatca taaaatattg aaagatacag ttattgcaac agtactattt gtaggtttat
      961 atcttagcgt aaatttgcta tattctttca tttttctaag taataaattg ctcactgcta
     1021 ctcattt
//
LOCUS       DASDYO010000249         1023 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.251, whole genome shotgun sequence.
ACCESSION   DASDYO010000249 DASDYO010000000
VERSION     DASDYO010000249.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1023)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1023)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1023
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.251"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..305
                     /locus_tag="U0290_003020"
     CDS             <1..305
                     /locus_tag="U0290_003020"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464641.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="AraC family transcriptional regulator"
                     /protein_id="HEM2303026.1"
                     /translation="LIPNHMPISGLATKNLIGNQLKNIPSGDYYLLACAISQSNNILS
                     YFNLSNSLRGKEDEKLSFPKCSGKHYAIKLREPIPEDPPILANVGKILISCLKNTI"
     gene            370..726
                     /locus_tag="U0290_003021"
     CDS             370..726
                     /locus_tag="U0290_003021"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2303027.1"
                     /translation="MALNAKSITIGLPVSDLEKSASWYEKLFMSDEKLTPVEGVVEYQ
                     IGSVWIQLFEEKINVSENVLRIGVEDLDVEFERLKKLGVITDEVIEDAPGIIRYFVFS
                     DPDGNKLSFYWLYDQE"
BASE COUNT          370 a          109 c          204 g          340 t
ORIGIN      
        1 ctcttatacc gaatcatatg cctatatcgg gattagctac taaaaattta ataggaaatc
       61 aattgaaaaa tattccaagt ggagactatt atttattagc ttgtgcgata agccagtcta
      121 ataacattct atcttatttt aacttaagta atagtttgag agggaaagaa gatgaaaagc
      181 tatcttttcc taaatgttct ggcaagcatt acgcgattaa gctgagagaa ccaataccag
      241 aagatccgcc aatattagct aatgtgggaa aaattttaat ctcctgtttg aagaacacaa
      301 tctagaacaa tattgtttga ctatgaaatg ttaaaataat tgcaggctaa tgaaaaggag
      361 agataagata tggctttaaa tgcaaagagt atcactatag gactaccagt aagtgatttg
      421 gagaaatctg ctagttggta tgaaaaacta tttatgagtg atgaaaaatt aacaccagtt
      481 gaaggcgttg ttgaatatca aattggttca gtttggattc aactttttga agaaaaaata
      541 aatgtttcag aaaacgtttt acgcataggg gtagaagatt tagatgtgga atttgaacgt
      601 ttaaaaaaac ttggagtaat aactgacgag gtgatagaag atgcacctgg tattattcga
      661 tattttgtct tctctgatcc agatggtaat aagttgtcat tctattggtt gtatgatcag
      721 gaatagattt gaacaggatt ataggatgga tgtaacgctt aaacgacgga tgtatgacgt
      781 cgttttttga tgttagaaat aatgcttaag tggggtaaga tataacatta tggattttaa
      841 tagaattagc gtatttatat attttgttat gaatggttag ttaattcgcc ttgttgaaaa
      901 gttgaaattt aatattctag aggcaatatt tttagattaa agtgataact ttttgataac
      961 agaaatttta taagagtcaa ataatatgga agatacgaat tttaaatgta taagatagag
     1021 tta
//
LOCUS       DASDYO010000250         1006 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.252, whole genome shotgun sequence.
ACCESSION   DASDYO010000250 DASDYO010000000
VERSION     DASDYO010000250.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 1006)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 1006)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..1006
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.252"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            62..>1006
                     /locus_tag="U0290_003022"
     CDS             62..>1006
                     /locus_tag="U0290_003022"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463838.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303028.1"
                     /translation="MTTKKAFTDEEYFKLSEAVYQDGTLNSKKINIELSYRTKSNWKV
                     VSKLNDRATNTQAFAVIPEEKGKDGKIYYNHNNMIFVYRGTKESKDFGSDIINVFAGK
                     NSRTSLDRKSKNPFQVSKEWTEEVLKEFNPKNPTSTGHSLGGALSHYNSILYDFNATT
                     YAAPNIYQLLPEDKQKKVRDGFYNNSIIDFTHDDDMIRTFDQFSSPIVGSQYIAERNN
                     VKVGVKGVFGAIPGHYNETFEGCFSSDGTMKLKVDVDSIIKHAQDIDNIIQSLQTNND
                     DLENLEEKLQIGSKKIQNQLEEEIRIGGVYSELTTWDID"
BASE COUNT          393 a          134 c          179 g          300 t
ORIGIN      
        1 agtataataa ttttagttcg ttttgacata aaagacctcc agagatgaaa ggatgattga
       61 gttgactact aaaaaagctt tcactgatga agaatatttc aagctttccg aggctgttta
      121 tcaagatggc acattaaata gtaaaaaaat taacattgaa ctaagttata gaacaaaaag
      181 taattggaaa gtagtgtcaa aattaaatga tagagctact aacacacaag cttttgcagt
      241 tattccagaa gaaaaaggaa aagatggtaa aatctattat aaccataata acatgatttt
      301 tgtctatcgc ggaacaaaag agtcaaaaga ttttggcagt gatattatta atgtatttgc
      361 agggaaaaat tctagaacta gcttagatag aaaatcaaaa aatcctttcc aagtctctaa
      421 agaatggaca gaagaggtat taaaagaatt taatcctaaa aatcctactt ctactggaca
      481 tagtttaggc ggagcgctat cgcattataa ttcaatttta tacgatttta atgcgactac
      541 atacgcagct cctaatattt atcaattatt acctgaagat aagcaaaaga aagttcgtga
      601 tggcttttat aataattcaa ttattgattt cactcatgat gatgacatga ttagaacttt
      661 tgatcaattt agttcaccta ttgtaggttc ccaatatata gcggaacgaa ataacgtcaa
      721 agttggagtc aaaggagttt ttggagctat tccagggcac tacaatgaaa catttgaagg
      781 ctgtttttct agcgatggaa cgatgaagtt aaaagtagat gtagattcta ttattaaaca
      841 tgctcaagac attgataata ttattcagtc actacaaacg aataatgatg acttagagaa
      901 ccttgaagaa aaactacaaa taggttccaa gaaaatacaa aatcaattag aggaagaaat
      961 aagaattggt ggagtttata gtgaattgac tacctgggat atagat
//
LOCUS       DASDYO010000251          993 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.253, whole genome shotgun sequence.
ACCESSION   DASDYO010000251 DASDYO010000000
VERSION     DASDYO010000251.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 993)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 993)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..993
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.253"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            32..895
                     /locus_tag="U0290_003023"
     CDS             32..895
                     /locus_tag="U0290_003023"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464217.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="FliC/FljB family flagellin"
                     /protein_id="HEM2303029.1"
                     /translation="MKVNTNIISLKTQEYLRKNNEGMTQAQERLASGKRINSSLDDAA
                     GLAVVTRMNVKSTGLDAASKNSSMGIDLLQTADSALSSMSSILQRMRQLAVQSSNGSF
                     SDEDRKQYTAEFGSLIKELDHVADTTNYNNIKLLDQTATGAATQVSIQASDKANDLIN
                     IDLFNAKGLSAGTITLGSGSTVAGYSALSVADADSSQEATEAIDELINNISNGRALLG
                     AGMSRLSYNVSNVNNQSIATKASASSIEDADMAAEMSEMTKYKILTQTSISMLSQANQ
                     TPQMLTQLINS"
BASE COUNT          323 a          207 c          174 g          289 t
ORIGIN      
        1 tttctaaacc gaatgtagga gggaaacaca aatgaaagta aatactaata tcattagctt
       61 gaaaacacaa gaatatcttc gtaaaaataa cgaaggcatg actcaagcgc aagaacgttt
      121 ggcatctggt aaacgtatta acagttctct tgatgacgct gctggtcttg cagttgttac
      181 tcgtatgaac gttaaatcta caggcttaga tgcagcaagc aaaaactcat ccatgggtat
      241 tgacttgtta caaacagcgg attcagctct tagctccatg agttcaatct tgcaacgtat
      301 gcgtcaatta gcagtacaat cttctaacgg ttcattcagt gacgaagatc gtaaacaata
      361 cactgctgaa ttcggtagct tgatcaaaga acttgatcac gttgctgaca ctactaacta
      421 caacaacatc aaattactag atcaaactgc tacaggtgct gctactcaag taagcatcca
      481 agcgtctgat aaagctaatg acttaatcaa tatcgatctt ttcaatgcga aaggtctttc
      541 tgctggaaca atcactttag gtagtggttc tacagttgct ggttatagtg cattatctgt
      601 tgctgatgct gattcttctc aagaagcaac ggaagctatt gatgaattaa tcaataacat
      661 ctctaacggt cgtgcacttc taggtgctgg tatgagtcgc cttagctaca atgtatctaa
      721 cgtgaacaac caatccatcg caactaaagc atctgcttcc tctattgaag atgcagatat
      781 ggctgctgaa atgtccgaaa tgactaaata caaaattctt acacaaacat ctatcagcat
      841 gctttctcaa gcaaaccaaa caccgcaaat gttaactcaa ttaattaaca gctaataaca
      901 tatcaaattc atttatcgaa cattgtttac ccttagcccc tcgtcacccc ggacgagggg
      961 cttttctttt tatttataaa aatatttttg gat
//
LOCUS       DASDYO010000252          992 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.254, whole genome shotgun sequence.
ACCESSION   DASDYO010000252 DASDYO010000000
VERSION     DASDYO010000252.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 992)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 992)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..992
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.254"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..170
                     /locus_tag="U0290_003024"
     CDS             <1..170
                     /locus_tag="U0290_003024"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726083.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2303030.1"
                     /translation="KKIDLIKSAGLTTNAMANMGKDKYISLQNLEKICRALECTPNEV
                     ISFKTEKVKNE"
     gene            229..>992
                     /locus_tag="U0290_003025"
     CDS             229..>992
                     /locus_tag="U0290_003025"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726065.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA adenine methylase"
                     /protein_id="HEM2303031.1"
                     /translation="MRFIGNKESMVTEIYELLKRKGLVDKGYTLFDAFTGTGTVADYL
                     KDSFRLKVNDLLNWSVIYSRGRILANECTFAKLGFDPIKFFNSNDEIIKGFFYENYSP
                     GGSERMYFNEKNAGRIDYFRQTVEEWFNKELINYNEYCYLLACLIESVSHVSNTAGVY
                     GAFLKRWDSRALKDIKFIEVISYEKKNIKADFYNSKLEDIIEDVECDVLYLDPPYTQN
                     QYGTQYHLLETLVLYDNPSISPVTGSRKTAPMRSDWS"
BASE COUNT          358 a          128 c          198 g          308 t
ORIGIN      
        1 ttaagaaaat agatttaata aagagtgctg gtttgactac aaatgctatg gcgaatatgg
       61 ggaaagataa gtatatttca ctccagaatc ttgagaaaat atgtagggcg ttagaatgca
      121 ctcctaatga agttattagt tttaagacag aaaaagtgaa aaatgaataa gttgagcaga
      181 atataagaaa tatcaaaagt gaattgaagg aaaggtatga atttttatat gcggtttatt
      241 gggaataaag aatcaatggt aacagaaata tatgaattgt tgaaaaggaa agggcttgtt
      301 gataaaggat ataccttatt cgatgctttt actggaacag gtaccgtcgc tgattactta
      361 aaggattctt ttaggttaaa agtgaatgac ttactaaatt ggagtgttat ttactctagg
      421 ggaagaattc ttgcgaatga atgtacattt gcaaaattag gttttgatcc tataaaattt
      481 tttaatagta acgatgaaat aataaaaggc tttttctatg aaaactactc tccaggtggc
      541 tcggaaagaa tgtatttcaa cgaaaaaaat gctggtagaa tagattactt tagacaaaca
      601 gtggaagaat ggtttaataa agaattgatt aactacaatg aatattgcta tttgcttgcg
      661 tgtttaatag aatccgtttc ccatgtatca aacactgccg gggtatatgg tgcattcctc
      721 aagcgttggg actccagagc gcttaaagat atcaaattta ttgaggttat ttcctatgaa
      781 aagaaaaata taaaagctga tttttacaat tcaaaacttg aagatataat tgaagatgtt
      841 gaatgtgacg tattatatct tgaccctcct tatacacaaa atcagtacgg cacgcagtac
      901 catttgttag aaactctggt tttatatgat aatccgtcta tcagccccgt taccggatct
      961 agaaaaactg ctccaatgag atcagactgg tc
//
LOCUS       DASDYO010000253          990 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.255, whole genome shotgun sequence.
ACCESSION   DASDYO010000253 DASDYO010000000
VERSION     DASDYO010000253.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 990)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 990)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..990
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.255"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(96..>990)
                     /locus_tag="U0290_003026"
     CDS             complement(96..>990)
                     /locus_tag="U0290_003026"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464112.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="AI-2E family transporter"
                     /protein_id="HEM2303032.1"
                     /translation="LILLFSFVIPAVKDQIVSLFKSFPGYWDQITQKFDEFSRSSLFD
                     QIKDKLNTNMSDIMKTLSTKGTSVINSAISSIGSIVGTVTEVVLAIVTTPLVLFYLLK
                     DGKKLPDFLLKMLPVNGRAHTRQVLGEANHQISSYIRGQIIVSLCIGILLFIGYLIIG
                     LPYALTLAIIAACTSIVPYLGPAIAITPAIIIAIVTSPWLLIKLIIVWCVVQLLEGKF
                     ISPQVMGKTLKVHPITILFVILVAGNLFGVLGVIFAVPGYAVLKVIVTHVFIWFKRIS
                     GLYGEQPESEYVESPTEEKEL"
BASE COUNT          343 a          175 c          160 g          312 t
ORIGIN      
        1 gagaaaaatt atgtcttttt tgtgaacatt agttttaaca caacaaaaaa acactattag
       61 cagaaaaata ttttctaact aatagtgttt ttattttata attctttttc ttctgttggt
      121 gattctacat attcactttc aggttgttcc ccgtaaagcc cagagattcg tttgaaccaa
      181 ataaatacat gcgttacgat gactttaagt accgcataac ctggtactgc gaagataaca
      241 cccagtacac cgaatagatt tccagctact aaaataacga ataaaatcgt gattggatgt
      301 acttttagtg ttttacccat gacttgagga gaaatgaatt taccttcaag taattgaacg
      361 acacaccaga ctatgattaa tttaattagt aaccaaggtg aagtaacaat cgcgataata
      421 atcgctggtg taatcgcaat tgctggtcct aaataaggaa caatactagt acaagctgca
      481 ataatagcaa gtgttaatgc atatggtaga ccgataatta aataaccgat aaatagcaaa
      541 ataccaatac acaaacttac aataatttgt ccacgaatat atgaactaat ttggtggttt
      601 gcttcaccaa gtacttggcg agtatgcgca cgaccattta ctggtaacat ttttagtagg
      661 aagtctggta atttttttcc atcttttaac aagtagaata aaacaagcgg cgtagttaca
      721 atcgctaaaa caacctctgt taccgttcca acaatactac caatacttga aatagcacta
      781 ttaattacag atgttccttt tgtggaaaga gtcttcatga tatcgctcat gttcgtattt
      841 aatttatctt ttatttgatc aaataagctc gagcgactga actcatcaaa tttctgtgtg
      901 atttggtccc aataccccgg gaatgatttg aacaagctaa caatctgatc tttcacagct
      961 ggaatgacaa aactaaatag tagaatgagt
//
LOCUS       DASDYO010000254          979 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.256, whole genome shotgun sequence.
ACCESSION   DASDYO010000254 DASDYO010000000
VERSION     DASDYO010000254.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 979)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 979)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..979
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.256"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            367..720
                     /locus_tag="U0290_003027"
     CDS             367..720
                     /locus_tag="U0290_003027"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724909.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303033.1"
                     /translation="MEKIYRGNGFAVIERNGEFQITFPKGVTGEPVFFPITKALMEKA
                     FKSSDDAYEVMIYAETGLWPEKNTEEEENERIRTFVRKFPELLIKVPDNQDLFTEEEL
                     KELLPLGKKKLSEEE"
     gene            836..946
                     /locus_tag="U0290_003028"
                     /pseudo
     CDS             836..946
                     /locus_tag="U0290_003028"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724903.1"
                     /note="incomplete; partial in the middle of a contig;
                     missing C-terminus; Derived by automated computational
                     analysis using gene prediction method: Protein Homology."
                     /pseudo
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
BASE COUNT          388 a          104 c          213 g          274 t
ORIGIN      
        1 cagaatcaag tggattataa ggctatttta cgtaatttgt tgaaccttaa aaattagagc
       61 ttaagtaaag gtgagtctaa tgagcagtat acagataaag ctatatctgc tgctgacgaa
      121 aatcctagaa ttttggaaga attattagga cttgatccta tgagtttagg agaaaaccct
      181 gtgttagtag atataaaaaa ccaccaatat gagagtgcct agtggtaatg aatcaggagc
      241 ttggcaaggt ttttgggaac catgagggtt cgcaagtggt ggaatatctg aagctgttgt
      301 aaatgcaatt aaaagtgatg aatatattgt tataaatata tttaaatgct tgggggataa
      361 attgtaatgg aaaaaattta tagaggaaat ggattcgcag taatagaaag aaatggagag
      421 tttcaaataa ctttccctaa aggagtaact ggtgaaccag tattttttcc cattacaaaa
      481 gcgctgatgg aaaaagcgtt caagtcatca gacgatgcct atgaagtaat gatatatgct
      541 gaaacaggtt tatggccaga gaaaaataca gaagaagagg agaatgaacg aatcagaaca
      601 tttgtaagaa aattcccaga gttattgata aaagttcctg ataatcaaga tttatttaca
      661 gaagaggaat tgaaagaatt gctgccttta ggaaagaaaa aattatcaga agaagagtaa
      721 ttttataaaa taaaaagata ctttatcttc gggttggcat tggaaagcag agctatgaat
      781 agtaagagca agctcactaa tcaagttgcc aatagataac aaggagataa aatggatgaa
      841 ttttgattta atggaatata aaaaaatttt agaagaagat atttatttat tgggttatca
      901 ggaattaaga tacgctatat tcgaaggcga gaaaaataat cgacaataat atcaagttag
      961 agttgagaag aatgaagat
//
LOCUS       DASDYO010000255          960 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.257, whole genome shotgun sequence.
ACCESSION   DASDYO010000255 DASDYO010000000
VERSION     DASDYO010000255.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 960)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 960)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..960
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.257"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..362
                     /locus_tag="U0290_003029"
     CDS             <1..362
                     /locus_tag="U0290_003029"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303034.1"
                     /translation="YTLVVPEKVNLSNDNATEMSVKTINRNLEPGKEVEVTLSSGLSA
                     DGEIELQRVGAISDVITSSFKSNNSVVPMANPVIGSFSGYAMEETEVSKIQIGNPQGD
                     KKAGAYQTTLTFTAAFK"
     gene            390..695
                     /locus_tag="U0290_003030"
     CDS             390..695
                     /locus_tag="U0290_003030"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2303035.1"
                     /translation="MKRKLVLAMVLISFCGMFFLSPDRVQASQTVVEVFISEDDLDVS
                     EENIQEIPKKELAASSDKDNKQPILPKAGDTVTNYTLLGLVLVLIWLIMQRRSKKKE"
     gene            770..>960
                     /locus_tag="U0290_003031"
     CDS             770..>960
                     /locus_tag="U0290_003031"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2303036.1"
                     /translation="MARIEYEEKIQKSLLVLYFRGSTIQSICREYGIPRYEFHKWMKL
                     HDADKLETKEVKTFLQIRE"
BASE COUNT          344 a          149 c          210 g          257 t
ORIGIN      
        1 attataccct cgttgtaccc gaaaaagtaa atttatctaa tgataacgcc acagaaatgt
       61 ctgtgaaaac aatcaatcgt aacttagaac caggaaaaga agtagaggtg acattatcta
      121 gtggattatc agccgatgga gagattgaat tacaacgggt tggcgctatt tcggacgtaa
      181 taactagtag ttttaagagt aataatagtg tagtacccat ggctaatccc gtcattggaa
      241 gcttttcagg atatgcgatg gaggaaacag aagtaagtaa aattcaaatt ggaaaccctc
      301 aaggagacaa aaaagctgga gcatatcaaa caacgttaac ttttacagct gcttttaaat
      361 aagaaattac gaaaggagtt gtgcatttct tgaaaaggaa attagttctg gcaatggtac
      421 taatcagctt ttgtgggatg ttcttcttat cgcctgaccg tgttcaagct agtcagacag
      481 tggttgaggt gttcatttca gaggatgatt tggatgtcag tgaagaaaac atacaggaaa
      541 tccctaaaaa agaactggca gcctcttcag ataaggataa caaacaaccc atattaccta
      601 aagcaggtga tacagtaact aactatacct tgttgggttt agtgctcgtc cttatttggt
      661 tgataatgca aagaaggagt aagaagaaag aataacccct atgacagcat cgtaatgtag
      721 caagtaaaaa aggaaagaaa atttctgtat tagataggaa gtgataggta tggctcgaat
      781 cgaatatgaa gaaaaaattc aaaaaagcct actggtttta tactttaggg ggtctaccat
      841 acagtctatc tgcagggagt atggtattcc tcgttacgaa tttcacaaat ggatgaagtt
      901 acatgatgcc gataaactgg aaaccaaaga ggtgaagact ttcctacaga taagagaatt
//
LOCUS       DASDYO010000256          937 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.258, whole genome shotgun sequence.
ACCESSION   DASDYO010000256 DASDYO010000000
VERSION     DASDYO010000256.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 937)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 937)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..937
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.258"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..105
                     /locus_tag="U0290_003032"
     CDS             <1..105
                     /locus_tag="U0290_003032"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465075.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="prepilin peptidase"
                     /protein_id="HEM2303037.1"
                     /translation="LLTALILNKVKKNKQVPFVPYIYVSFLLISILIK"
     gene            117..791
                     /gene="radC"
                     /locus_tag="U0290_003033"
     CDS             117..791
                     /gene="radC"
                     /locus_tag="U0290_003033"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465074.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DNA repair protein RadC"
                     /protein_id="HEM2303038.1"
                     /translation="MLIHEISENEKPREKLQNYGIEALSSSELVALIIETGTKNESVL
                     TIANRIIMKFKNVGEMQYASIEEFQLVNGIGIAKASKIMAAIELGRRIGIVTEQEEVV
                     VRCPEDAVKLVMPELAFLFQEHFHCLFLNTKNQVIYRQTIFVGGLNASIVHPREVFRL
                     ALRKSAASIMCFHNHPSGDPTPSSEDLLVTKRLAEAGNIVGITLLDHIIIGKNKYISL
                     KEKGYF"
BASE COUNT          319 a          141 c          181 g          296 t
ORIGIN      
        1 ttattaactg cattgatatt aaataaagtg aagaaaaata agcaagttcc atttgttccg
       61 tatatatatg tttcctttct gctgattagt attttgataa aataggagct gttcttatgt
      121 tgatacatga aatatcagag aatgaaaaac cacgcgaaaa gctacagaat tatgggatag
      181 aagcactttc atcttcggaa ttggttgctt taattattga aacagggact aaaaatgagt
      241 cagttttgac gatagctaat cgaatcatca tgaaattcaa aaacgtgggc gaaatgcaat
      301 atgcttctat agaagaattt cagttagtta atggtatcgg aatagcaaaa gcttctaaaa
      361 tcatggctgc gattgaactt ggaagacgta tcggcatcgt aacggagcag gaagaagtgg
      421 ttgttaggtg tcccgaagat gcggtaaaac ttgtaatgcc agagcttgct tttctttttc
      481 aagaacattt ccattgtcta tttttaaata ccaaaaacca agtaatatat cggcaaacga
      541 tttttgttgg tggtctgaat gcttccatcg ttcatcctag agaagttttt agattagcgc
      601 tcaggaaatc agcagcatca atcatgtgct ttcacaacca tccatctggt gatccgactc
      661 cttctagtga agacttgctt gtaacaaaaa ggttagctga agctggtaat attgtcggaa
      721 ttaccttact agatcatatt atcattggca agaataagta tattagtttg aaagaaaaag
      781 gttactttta aatcaagaat actgttcaca aaatgtctac agacaacgtt tgctacctta
      841 tgctaaagtg agtaccaata aaatgtaaag gtggcttatt gtgcaaaata aatggagagt
      901 atataaagat aatattatcg tcttttcaat agttatc
//
LOCUS       DASDYO010000257          922 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.259, whole genome shotgun sequence.
ACCESSION   DASDYO010000257 DASDYO010000000
VERSION     DASDYO010000257.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 922)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 922)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..922
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.259"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..537)
                     /locus_tag="U0290_003034"
     CDS             complement(<1..537)
                     /locus_tag="U0290_003034"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725628.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2303039.1"
                     /translation="MPSTDIAYSRTGKITNTSGHAVWTQPCGQINSTLKGPASDYLNK
                     EITIWRKVENKRGTYYQFSETKTPNIKAWLDARAITLYDQVHFNEEYNQMAVISTVIG
                     HAVWSTPYLQSDSKLIAPASNYEGKRVEIIRRAKTTRSIYYQFSYDNKVIGWLDTRAF
                     SLIPSNTAMVISNSTNDIF"
     gene            complement(556..894)
                     /locus_tag="U0290_003035"
     CDS             complement(556..894)
                     /locus_tag="U0290_003035"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734189.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GW domain-containing glycosaminoglycan-binding
                     protein"
                     /protein_id="HEM2303040.1"
                     /translation="MLKRNVQKGMISLIAIMMFLSMFSFTNLNSIKTVEAATTAYNTI
                     EYNKSVNLDANIAYPETNAFWSAPYYSEGSTFISSATAPSYAKREAKTERGIYYQVKL
                     GDKIIGWLDK"
BASE COUNT          269 a          157 c          137 g          359 t
ORIGIN      
        1 aaaaatgtcg tttgtactat tacttatcac catagcagtg tttgaaggta ttaatgagaa
       61 agccctagtg tctaaccaac caattacttt attatcataa ctaaattgat aatatattga
      121 ccttgttgtt ttggctcttc tgattatttc aactcttttt ccttcataat tagaagcagg
      181 cgcaattaat ttactatcgg actgaagata aggtgttgac catactgcat gtccaataac
      241 tgtagatata actgccatct gattgtactc ttcattaaaa tgtacttggt catagagtgt
      301 tatggctctt gcatctaacc aagcttttat attaggagtt ttggtttcac taaattgata
      361 ataagtacct cttttgtttt ctacttttct ccaaatagtt atttctttgt taagataatc
      421 acttgctggt ccttttaaag tagagtttat ttgtccgcaa ggttgagtcc atactgcatg
      481 tccagaagtg ttagtgattt tcccggtcct tgagtaagca atatccgtag aaggcatttc
      541 ataaaattta aaagctcatt tatcaagcca accaataatt ttgtctccca attttacttg
      601 atagtaaatt cctctttcag tttttgcctc tctttttgca taagaaggtg cagttgcact
      661 tgatataaat gttgatcctt ctgaataata tggtgcagac caaaatgcat ttgtttctgg
      721 atatgcaata ttagcatcta aattaactga tttattgtac tcaattgtat tgtacgcagt
      781 tgttgcagcc tctacagttt taatagaatt taaatttgta aaactgaaca ttgataaaaa
      841 catcataatt gcaattaaac taatcatccc tttttgtaca tttctcttta acatgatttt
      901 gttccctctt tcatttatat gt
//
LOCUS       DASDYO010000258          917 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.260, whole genome shotgun sequence.
ACCESSION   DASDYO010000258 DASDYO010000000
VERSION     DASDYO010000258.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 917)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 917)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..917
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.260"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            102..>917
                     /locus_tag="U0290_003036"
     CDS             102..>917
                     /locus_tag="U0290_003036"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466118.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4969 domain-containing protein"
                     /protein_id="HEM2303041.1"
                     /translation="MKKRGLLLVSVLMLFIFLTVACGSSEDNEESGEISTKEIELTVD
                     DPIIPTDENGEATIEGTVDPKSKLTIDGKAVKKDDSGRFTYTYSLPNDNVAEVDVKLL
                     AVRKNYKDEKYTITITNNSKAYNDNMVKQEAIQKEEAEKAEKERKEAEEKAKQEEEAA
                     AAKAATTDENTPSDDTVYGTLASKDTLTKEGDAFYKDEALDVLYSTVENDEIFQVLIQ
                     LGDESTIRKDLDKNHLTELARDYMESDATLIQTVSDESFVYESPSINKTYTVDY"
BASE COUNT          373 a          136 c          171 g          237 t
ORIGIN      
        1 ataaatgatc atatatggca catttttaaa aaaacaaggt taatcatgtt ataatagcca
       61 ttctgtatat ttatatctaa acacaaaagg agccggaaaa gatgaaaaaa agaggtttat
      121 tgttggtaag tgttttaatg cttttcattt ttttgacagt agcatgcggg agttctgaag
      181 acaatgaaga aagtggagaa ataagtacga aagaaattga acttaccgtt gacgacccta
      241 ttataccaac cgatgaaaac ggtgaagcaa ctatagaggg aactgtagat cctaaatcca
      301 aattaaccat tgatggtaaa gccgtaaaaa aagatgacag cgggagattt acttatactt
      361 acagtttacc taacgataat gttgcagaag ttgatgtcaa acttctagcg gtcagaaaaa
      421 attacaaaga tgaaaagtac actataacta ttactaacaa ttcaaaagca tataacgaca
      481 acatggttaa acaagaggca atacaaaaag aggaagccga gaaagctgaa aaggaacgta
      541 aagaagcgga ggaaaaagca aaacaagaag aagaagctgc cgctgcaaaa gctgcaacga
      601 ctgatgaaaa cactccttct gatgataccg tatatggtac tttagccagt aaagatactt
      661 taacaaaaga gggagatgca ttttataaag atgaagcact tgatgtactc tattctacag
      721 tagaaaacga tgaaattttt caagtactta tacaattagg cgacgaaagt acgattcgaa
      781 aagatttaga taaaaatcat ttaacagaat tagcacgaga ttatatggaa tctgatgcca
      841 ctcttataca aactgtctcc gatgaatctt ttgtttatga atctccatct ataaataaaa
      901 catatacagt agattat
//
LOCUS       DASDYO010000259          913 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.261, whole genome shotgun sequence.
ACCESSION   DASDYO010000259 DASDYO010000000
VERSION     DASDYO010000259.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 913)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 913)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..913
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.261"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(15..905)
                     /locus_tag="U0290_003037"
     CDS             complement(15..905)
                     /locus_tag="U0290_003037"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464360.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="Rgg family transcriptional regulator"
                     /protein_id="HEM2303042.1"
                     /translation="MVAYGELIREVRLSKGLTQKEVYTGVISKSYAIGFEKGKHDITL
                     VLFEEILERVMLSSDEFFFMNRGYSLAEEDNFWYKFANAANQKSLADLQELYQEVLQQ
                     TGDRANLRKAIVHSRMEINEQFLLNNRFDVSIVSEKDKAVIQTYLWKVQSWTLEEIRI
                     FANSVDYFEEDVQIYFFQLVLKSLEKYKHYDRGKKVFSTLLSNIIEELITRNQLEYAA
                     QLLEILHELSSTHDCAFYRIMHNYYQGLIWMKNDQVEQGLKESKSAIRILDVLDYKSL
                     AQLYNTLLQQFLEKENIQIV"
BASE COUNT          276 a          166 c          132 g          339 t
ORIGIN      
        1 gtacctgctt tactttaaac tatttggata ttctcttttt ctaaaaactg ttgaagtaat
       61 gtattataaa gttgtgcaag ggatttgtaa tccagtacat ctaaaattcg aatggcactt
      121 ttagactctt ttaagccttg ttcgacctgg tcatttttca tccagattaa gccttgatag
      181 taattatgca taatccggta aaaagcacag tcatgcgtag aagacagttc gtgcagtatt
      241 tctaataatt gcgcggcata ttctaattga ttacgggtaa ttagttcttc aattatattg
      301 gatagaagcg tggaaaatac ttttttgcca cgatcgtaat gtttatattt ttcgagtgac
      361 ttcaagacca attgaaaaaa ataaatttgt acatcttctt caaaatagtc cactgaatta
      421 gcgaaaatcc gaatttcttc tagtgtccat gattggactt tccacaaata cgtttggata
      481 actgctttat ctttctcaga aacaatacta acgtcaaatc gattatttaa tagaaattgt
      541 tcattaattt ccattcttga gtggacaatt gcttttctta gattggctct atctcctgtt
      601 tgctgcaaca cttcttggta taattcttgt aagtctgcca aacttttttg attagctgca
      661 tttgcaaatt tgtaccaaaa attgtcttcc tccgctaaag aataacctct attcataaag
      721 aaaaattcat ccgaacttag cattactcgt tctaaaattt cttcaaatag tactaatgta
      781 atatcatgtt ttcctttttc aaaacctatt gcatatgatt ttgaaattac ccctgtataa
      841 acttcttttt gcgtcaatcc ttttgaaagt cgtacttcgc gaattaactc accatacgca
      901 accattgata tcg
//
LOCUS       DASDYO010000260          903 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.263, whole genome shotgun sequence.
ACCESSION   DASDYO010000260 DASDYO010000000
VERSION     DASDYO010000260.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 903)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 903)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..903
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.263"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            17..391
                     /locus_tag="U0290_003038"
     CDS             17..391
                     /locus_tag="U0290_003038"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464837.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303043.1"
                     /translation="MVKWHKIYTYSERVEQWDNQTIIEMPSESEYEGYFFLLPKKMVY
                     SLTPEYSYFYFPNTWNFFLKKHTEKKELSVSNMILCFKKENDEIMQFFHTKKVNDSIV
                     KVRTHIPKKIEKDVIIENDLIR"
     gene            369..>903
                     /locus_tag="U0290_003039"
     CDS             369..>903
                     /locus_tag="U0290_003039"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464836.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helicase SNF2"
                     /protein_id="HEM2303044.1"
                     /translation="MKMTLLDNQKQALIKLKKYKVGALFMKPGSGKTRVACELINDVN
                     PDYVLWITPFQTKENLEIEISKWGYSFPQEIIGIESLSNSDRLYLYCRNKLKNSTNSY
                     IIMDESLKIKNIHALRTQRAIKLSRLATYKLIMNGTPLSRNILDLWSQLEFLSPKILN
                     LSFSQFKKTFCEYVTITQ"
BASE COUNT          354 a          152 c          135 g          262 t
ORIGIN      
        1 ggagcattag atataaatgg taaaatggca caaaatttat acatatagcg aacgagtaga
       61 acaatgggat aatcaaacaa ttattgaaat gccctctgaa agtgaatatg aaggttattt
      121 tttcttgcta cctaaaaaga tggtgtattc acttacacca gaatatagtt atttttattt
      181 tccaaataca tggaacttct ttttaaaaaa acacacagaa aagaaagaac taagtgtctc
      241 caatatgatt ctttgcttta aaaaagaaaa tgacgagata atgcagtttt tccacacaaa
      301 aaaagtaaac gatagcattg tcaaagtgcg tacccatatt cctaaaaaaa tagaaaaaga
      361 tgtgataatt gaaaatgacc ttattagata accagaaaca agcattaata aaactcaaaa
      421 aatataaggt tggcgctcta tttatgaaac caggaagtgg gaaaacacgg gtagcttgcg
      481 agttaataaa tgatgtaaac ccagattatg ttttatggat tacccctttt caaactaaag
      541 aaaatctcga aattgaaata agcaaatggg gttattcatt ccctcaagaa attatcggca
      601 ttgagtctct ctccaactca gatagattat acctgtattg ccgaaacaaa ctcaaaaatt
      661 ccaccaatag ttacattatt atggatgaaa gcctaaagat aaaaaatatc catgcacttc
      721 gaacacaacg agcgattaaa ctttctcgtc tggctaccta taaattaatt atgaacggca
      781 cacctcttag tcgtaatatt ttggatttat ggtcacagct agaatttcta tctcctaaaa
      841 tattaaatct aagtttttcc cagttcaaaa aaactttttg cgaatacgtc accattacac
      901 aac
//
LOCUS       DASDYO010000261          897 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.264, whole genome shotgun sequence.
ACCESSION   DASDYO010000261 DASDYO010000000
VERSION     DASDYO010000261.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 897)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 897)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..897
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.264"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..292
                     /locus_tag="U0290_003040"
     CDS             <1..292
                     /locus_tag="U0290_003040"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303045.1"
                     /translation="INRNLEPGKEVEVTLSSGLSADGEIELQRVGATSDVITSSFKSN
                     NSVVPMANPVIGSFSGYAIEETEVSKIQIGNPQGDKKAGAYQTTLTFTAAFK"
     gene            320..625
                     /locus_tag="U0290_003041"
     CDS             320..625
                     /locus_tag="U0290_003041"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463992.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="LPXTG cell wall anchor domain-containing
                     protein"
                     /protein_id="HEM2303046.1"
                     /translation="MKRKLVLAMVLISFCGMFLLSPERVQASQTVVEVFISEDDLDVS
                     EENIQEIPKKELAASSDKDNKQPILPKAGDTVTNYTLLGLVLVLIWLIMQRKRKKKE"
     gene            701..>897
                     /locus_tag="U0290_003042"
     CDS             701..>897
                     /locus_tag="U0290_003042"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463993.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2303047.1"
                     /translation="MARIEYGEEIQKSLLVLYSRGSTIDSICKEYGIPRYEFHKWMKL
                     HDADKLETKEVKTFLQIRELK"
BASE COUNT          324 a          139 c          197 g          237 t
ORIGIN      
        1 aatcaatcgt aacttagaac caggaaaaga agtagaggtg acattatcta gtggattatc
       61 agccgatgga gagattgaat tacaacgggt tggcgctact tcggacgtaa taactagtag
      121 ttttaaaagt aataatagtg tagtacccat ggctaatcct gttatcggaa gcttttcagg
      181 ttatgcgata gaggaaacag aagtaagtaa aattcaaatt ggaaaccctc aaggagacaa
      241 aaaagctgga gcatatcaaa caacgttaac ttttacagct gcttttaaat aagaaattac
      301 gaaaggagtt gtgcatttct tgaaaaggaa attagttctg gcaatggtac taatcagctt
      361 ttgtgggatg ttcctcttat cgcctgaacg agttcaagct agtcaaacag tggttgaggt
      421 gttcatttca gaggatgatt tggatgtcag tgaagaaaac atacaggaga tccctaaaaa
      481 agaactggca gcctcttcag ataaggataa caaacaaccc atattaccta aagcaggtga
      541 tacagtaact aactatacct tattgggttt agtgctcgtc cttatttggt tgataatgca
      601 aagaaaaagg aagaagaagg aataaccccc tgtgacatca tcataatgta gtaagtaaaa
      661 aggatataaa aatttctgtg ttagatagga agtgacaggt atggctcgaa tcgaatatgg
      721 agaagaaatt caaaaaagcc tactggtttt atactctagg gggtctacca tagactctat
      781 ctgcaaggag tatggtatcc ctcgttacga atttcacaaa tggatgaagt tacatgatgc
      841 cgataaactg gaaaccaaag aggtgaagac tttcctacag ataagagaat taaaaca
//
LOCUS       DASDYO010000262          870 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.266, whole genome shotgun sequence.
ACCESSION   DASDYO010000262 DASDYO010000000
VERSION     DASDYO010000262.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 870)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 870)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..870
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.266"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(152..397)
                     /locus_tag="U0290_003043"
     CDS             complement(152..397)
                     /locus_tag="U0290_003043"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466071.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="type B 50S ribosomal protein L31"
                     /protein_id="HEM2303048.1"
                     /translation="MKTGIHPEYRPVVFVDTSTDFKFLSGSTKSSSETIKWEDGNEYP
                     LLRVEISSDSHPFYTGKQKHATADGRVDRFNKKYGLK"
     gene            complement(499..870)
                     /locus_tag="U0290_003044"
     CDS             complement(499..870)
                     /locus_tag="U0290_003044"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_006831338.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="GtrA family protein"
                     /protein_id="HEM2303049.1"
                     /translation="MYLIMGGFTTIINIVTFWLCTYILNWDYRIANTIAFIASVLFAY
                     FSNKKFVFDSYTPTWKDRLREASSFFGFRCLTYIIDILVMILLISYLSVDELWAKIWT
                     NIIVLVLNYVFSKWIIFKVKK"
BASE COUNT          307 a          156 c          140 g          267 t
ORIGIN      
        1 gtaattagtg atattatacg caacttcaca gggaaaagta aacccttgaa aggaaagttt
       61 ttatttttag tagttctgag aaataattcc ataaaaaaac acacccagca aaagctgagt
      121 gcgcaaatta tttcgttcgt tacatacagt cttatttgag accgtatttt ttgttgaagc
      181 ggtccacacg gccgtctgca gtcgcatgtt tttgtttacc agtatagaac gggtgcgaat
      241 cagaagagat ttcgacacgt agtaatggat actcgttgcc atcttcccat ttaattgttt
      301 cgcttgagct cttagtagaa cctgacaaaa atttgaaatc agtactagta tcaacaaata
      361 ccactggacg gtactcagga tgaattccag ttttcatttc ttttcaactc cttcgccctg
      421 aatcatctga aacagagtaa ttaagtgctt ttacacacag tatagatatt ataacaatgt
      481 tgaagcaaac aagcaagatt attttttcac tttaaagatt atccatttgc taaacacgta
      541 gttcagtaca agcacaataa tattggtcca gattttcgcc cataattcgt ctacagataa
      601 ataactgatt aacagaatca tgactaaaat atctattata taggttaaac aacgaaaacc
      661 aaaaaatgaa ctcgcttcac ggaggcggtc tttccaagtt ggtgtataac tatcaaaaac
      721 aaatttttta ttcgaaaagt aggcaaaaag tactgatgcg ataaaagcaa tggtatttgc
      781 aatacgataa tcccagttca aaatatatgt acatagccaa aatgttacta tattaataat
      841 ggtagtaaat ccacccatta ttaaatacat
//
LOCUS       DASDYO010000263          868 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.267, whole genome shotgun sequence.
ACCESSION   DASDYO010000263 DASDYO010000000
VERSION     DASDYO010000263.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 868)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 868)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..868
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.267"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..515)
                     /locus_tag="U0290_003045"
     CDS             complement(<1..515)
                     /locus_tag="U0290_003045"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463843.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="TatD family hydrolase"
                     /protein_id="HEM2303050.1"
                     /translation="MRNMGYIDLHVHIDFYSEPIKIAREYERLKIYVIFVTYLPEIFL
                     KTRYEYDNYKYVRLGVGFHPDMVGEYDFDKNAFERGLQYTRYIGEVGLDFSKSNQQFK
                     EQQIEIFQQITSPKYNKGNVYSIHSRKAEVEVLQILKSNNVKSAIFHWYTGGKHMLKD
                     ISDSGYFFSVN"
     gene            complement(493..>868)
                     /locus_tag="U0290_003046"
     CDS             complement(493..>868)
                     /locus_tag="U0290_003046"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463842.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303051.1"
                     /translation="NTFTCGKSRVGKEYNHTGQCGACIPCILRKISLAAYDNEHFDAK
                     YFVGYKNVASASEKYLKDYINNIGYFDAYVEAIKNEEIFGEISNNQHKFHKENNYLRY
                     QKVMFDKFASEYERFIAKYGIH"
BASE COUNT          269 a          165 c           99 g          335 t
ORIGIN      
        1 tgatttacag aaaaaaaata tcctgaatct gaaatatctt ttagcatgtg ttttccccca
       61 gtataccaat gaaagattgc acttttaaca ttgttgcttt taagaatttg cagtacttct
      121 acctcagctt ttctggagtg gatcgaatac acatttcctt tgttatattt tgggctagtt
      181 atttgttgaa atatttctat ttgttgttct ttaaattgtt gattcgattt agaaaaatcc
      241 agccctactt ctccaatata tctagtgtac tgtagccctc tttcaaacgc attcttatca
      301 aaatcatatt cccctaccat atctggatga aatcctactc ctaatcttac atatttataa
      361 ttatcatatt catatcgagt tttcaaaaat atttctggca aataagtaac aaaaataaca
      421 tatatcttca accgttcgta ttctcttgca atctttattg gctctgaata aaaatctata
      481 tgcacatgaa gatcaatgta tcccatattt cgcaataaac ctttcgtatt cagatgcaaa
      541 tttatcaaac attacttttt gatatctcaa gtaattattt tccttatgga atttatgctg
      601 gttatttgat atttcaccaa aaatctcttc atttttaatt gcttcaacat aagcatcgaa
      661 ataccctata ttgttaatgt aatcctttaa atatttttct gacgcagaag ctacgttttt
      721 ataacccaca aaatatttag cgtcaaaatg ctcattatca tatgctgcca aagatatttt
      781 ccttaatata catggaatac acgcaccaca ttgtcctgtg tggttatact cttttccgac
      841 cctacttttt ccacatgtaa aagtattt
//
LOCUS       DASDYO010000264          846 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.269, whole genome shotgun sequence.
ACCESSION   DASDYO010000264 DASDYO010000000
VERSION     DASDYO010000264.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 846)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 846)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..846
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.269"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..782
                     /locus_tag="U0290_003047"
     CDS             <1..782
                     /locus_tag="U0290_003047"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010990866.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PcfJ domain-containing protein"
                     /protein_id="HEM2303052.1"
                     /translation="EVMYPVTQYTNGSFRKTVDMRTINAKWLKENKPFFKNSDRGFME
                     FELARRIQKRRGKVVSGIEKYLDYRAINKIPEGVGIVRFQNWIIKNKVDFSYYLDYLN
                     LMRDLNIAIDSENIIMPKNLVIAHDNAVKLLYQMKHEVEEQQYKVRFEKIKDLEKTID
                     NYAFIVPKQASDLLTEGKALSHCVGGSNYIKQHIEGKTTIIFVRDKQDLEKSFYTLEY
                     KNGQIYQLRGKHNCDPTKDVQEAANKWAKLLKSKTKVLQHS"
BASE COUNT          339 a          116 c          180 g          211 t
ORIGIN      
        1 aggaagttat gtatcccgta acacaatata caaatggatc gtttagaaaa acggtagaca
       61 tgcgaacaat taatgcgaag tggttgaaag aaaacaagcc cttctttaag aattcggaca
      121 gaggttttat ggaatttgaa ttagcaagaa gaatacagaa gcggcgagga aaggtagttt
      181 ctggaattga aaaatatctt gattaccgtg ctatcaacaa aatcccagaa ggagtaggaa
      241 tagttcgctt tcagaattgg attattaaga ataaagtgga ttttagctac tacctagatt
      301 atctaaacct aatgcgagac ttaaatattg caatcgatag cgaaaacata attatgccta
      361 aaaatttagt aatagctcat gataacgcgg tcaaattact gtaccaaatg aaacatgaag
      421 ttgaagaaca acaatataaa gtgcgatttg agaagataaa agacttagaa aaaacgatag
      481 ataattacgc ttttattgta cctaagcaag catcggactt attaacagaa ggcaaagcat
      541 taagccattg cgtaggcggt agtaattata ttaaacaaca cattgaaggg aaaacaacga
      601 ttatttttgt tcgtgataag caggacttag aaaagtcttt ttatacgctc gaatataaaa
      661 atggccaaat ttaccaactg cgagggaagc ataattgtga cccaactaag gacgtgcaag
      721 aggctgcaaa taagtgggct aaattactaa aaagtaaaac aaaagtatta cagcatagtt
      781 gaaataggag ggtgaagcat gagagagagt gagtttagag gtaaacgaat agacaacaga
      841 gaatgg
//
LOCUS       DASDYO010000265          837 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.270, whole genome shotgun sequence.
ACCESSION   DASDYO010000265 DASDYO010000000
VERSION     DASDYO010000265.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 837)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 837)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..837
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.270"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>837
                     /locus_tag="U0290_003048"
     CDS             <1..>837
                     /locus_tag="U0290_003048"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="teichoic acid biosynthesis protein"
                     /protein_id="HEM2303053.1"
                     /translation="QKLNIAFTQDKNSFTATISVDELASLSLPNNQTVWKFKVNNDYP
                     YTHLITDGPIINKPFQPENSLYKYHFDFPEGILTLVSKPIELLASIEEYKLDSDVMSG
                     SIKIKSPLPSNQFNAKLIFKRRPTPSFYLFHEQQQSFDLGLITENIVNFSIPTKDLST
                     AFLVDNTNILDAIIEVSSSHNKTGLSAFISIDADMKPAIPREIKIAAPLFATLRSYIT
                     GSNRLSFYFKKNIQGLVSLSQLKETKKDLTLQFKLENSISEGQIVAKRADKKANTFEY
                     NV"
BASE COUNT          307 a          155 c          117 g          258 t
ORIGIN      
        1 aacaaaagtt gaatattgct tttactcaag ataaaaattc attcacagct actatttctg
       61 ttgatgaact tgctagtctt tctctaccaa ataaccagac tgtgtggaaa ttcaaagtaa
      121 ataatgatta tccatataca catttaatca cagatgggcc aattataaat aaacccttcc
      181 aaccagagaa ctcgctttac aaataccatt ttgattttcc tgaaggtatt ttaacacttg
      241 tcagtaaacc tatagaacta ctagcttcga tagaggagta caaattagat tctgatgtga
      301 tgtctggttc tattaaaatc aagtcgccac ttccaagtaa ccaatttaat gcaaagctaa
      361 ttttcaaacg tagacctaca ccaagctttt atttatttca cgagcaacaa caatcatttg
      421 atttagggct tattactgaa aatatcgtta atttctctat tcccaccaaa gatttatcta
      481 cagctttctt agtagacaat acaaatatac tagatgccat aatcgaagta tcatctagtc
      541 ataacaaaac aggcttatct gcattcatat ccattgatgc agatatgaag ccagctattc
      601 ctagagaaat taaaatagca gcgccacttt ttgcaactct gcgctcctat attacaggct
      661 ctaacagatt atcattctat ttcaaaaaaa atattcaggg gttagtgagt ctgagtcaat
      721 taaaagaaac taaaaaagat ttgacactgc aattcaaatt agaaaacagt atctctgaag
      781 gtcaaatagt agctaaacgt gcagataaaa aagcgaatac atttgaatat aatgtag
//
LOCUS       DASDYO010000266          816 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.271, whole genome shotgun sequence.
ACCESSION   DASDYO010000266 DASDYO010000000
VERSION     DASDYO010000266.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 816)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 816)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..816
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.271"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>816
                     /locus_tag="U0290_003049"
     CDS             <1..>816
                     /locus_tag="U0290_003049"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003734747.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="glycosyltransferase family 39 protein"
                     /protein_id="HEM2303054.1"
                     /translation="VLFCVPLFGYIWYFYTDTLVLPFTALIALFYYLYTKSSKWWYFI
                     IIGLLFAVGYQIKPNIIILLPAMLIHLCFIRNWRKILLNTVIVAICFFGLSTVFTPIA
                     ESYDFKKDPTIEFPQTHWIMMGLGDPAGRYNSNDVAYTSQFKTKEEKEEANIEKIKER
                     IEEHGPLGLIKLFDNKVLNTWTDGTRAYTWYVNAALDYPAPYDYFFGDKRVVTELPAQ
                     LFHIINLFLICLGALRFYKKREFDMSFFVNISLVGVWLFHLFWEANQRYIMFIT"
BASE COUNT          240 a          128 c          151 g          297 t
ORIGIN      
        1 tgttttattc tgtgtgccat tatttggtta tatttggtat ttctatacag atacacttgt
       61 actgccattt acagcgctga ttgccttatt ttattatcta tacacgaaaa gtagtaaatg
      121 gtggtatttc atcattattg ggctgctgtt tgcagtaggt tatcaaatta agccgaatat
      181 catcatttta cttccagcaa tgcttattca tttatgtttt ataagaaatt ggcgtaaaat
      241 tctattgaac acggtcatcg tagcaatttg ctttttcggt ttaagcactg tttttacacc
      301 aatcgcagag agttatgact ttaagaaaga cccaaccatt gaatttcctc aaacacattg
      361 gattatgatg gggcttggcg atccagccgg tcgttataac agcaatgatg ttgcttatac
      421 ttcacaattt aaaacaaaag aagaaaaaga agaagccaat attgaaaaaa ttaaagaacg
      481 tattgaagaa catggaccgc ttggcttaat aaagcttttt gataataagg tgttaaatac
      541 ttggacagac ggaacgcgag catatacgtg gtatgttaat gctgcacttg attatccagc
      601 tccttatgat tacttctttg gagataaacg ggttgtcact gaattacctg ctcagctgtt
      661 ccatattatt aatttgtttt taatttgtct aggtgcttta cgtttttata agaaaaggga
      721 atttgatatg tcctttttcg ttaatatttc gctagtaggt gtttggctat tccacttatt
      781 ctgggaagca aatcagcgtt atattatgtt tattac
//
LOCUS       DASDYO010000267          780 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.272, whole genome shotgun sequence.
ACCESSION   DASDYO010000267 DASDYO010000000
VERSION     DASDYO010000267.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 780)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 780)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..780
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.272"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            145..618
                     /locus_tag="U0290_003050"
     CDS             145..618
                     /locus_tag="U0290_003050"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463990.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="tRNA (uracil-5-)-methyltransferase"
                     /protein_id="HEM2303055.1"
                     /translation="MKKKRVVIISLLLLLVSVIGISSYFLFKDKINLLDVDHSAVDWN
                     GKKQKDTSGEENTIAIPGFEKVTLYANETTQAVNFHNPEINDCYFKISLIHPDGSVLW
                     ISDLIEPGKGMYSIELEKTLAVGEYENAVLKYECFSLNDQSPLNGSEINLKLVVV"
     gene            638..>780
                     /locus_tag="U0290_003051"
     CDS             638..>780
                     /locus_tag="U0290_003051"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463991.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303056.1"
                     /translation="MNKLVLSTLSVAAMGMVFFSGGTAYAADKEGNTVVEYSVEGDYT
                     LVVP"
BASE COUNT          274 a          100 c          170 g          236 t
ORIGIN      
        1 catggctatt gaagcaccag agaatatcca ggcaggaaaa tatacaggga acgttgtgtt
       61 ttcgattaag tatgaatgat gtaaattaac cagactagtg attatgtcac agtcctgtgg
      121 ttatgaataa attggaggtt acctatgaag aagaaaagag tagtgattat atccttacta
      181 ctattgttag taagtgtcat tggaatcagt agttattttc tattcaagga taaaataaat
      241 ctgttggatg tagaccattc tgccgttgat tggaacggaa aaaaacagaa ggatacaagt
      301 ggagaagaaa atacaattgc cattccaggg tttgaaaaag taacgttgta tgcaaatgaa
      361 acaacacaag cagtgaattt ccataatccg gaaattaatg attgttactt caaaatatcg
      421 cttattcatc cggatggttc ggttctatgg atatctgatt taatcgaacc gggaaaaggt
      481 atgtattcca ttgaattaga aaaaacgtta gcggtaggcg aatatgaaaa tgcagtatta
      541 aaatatgaat gtttttcttt aaacgatcag tcacctttaa acgggtctga aataaattta
      601 aaattagttg tcgtctagac aaaggaggaa attttttatg aataaattag tattaagtac
      661 gttaagtgta gcagcaatgg gtatggtatt ttttagcgga gggacagcct acgctgcaga
      721 taaagaaggt aatacagtag tggaatattc tgttgaaggt gattataccc tcgttgtacc
//
LOCUS       DASDYO010000268          778 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.273, whole genome shotgun sequence.
ACCESSION   DASDYO010000268 DASDYO010000000
VERSION     DASDYO010000268.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 778)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 778)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..778
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.273"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            14..700
                     /locus_tag="U0290_003052"
     CDS             14..700
                     /locus_tag="U0290_003052"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681000.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="cell surface protein"
                     /protein_id="HEM2303057.1"
                     /translation="MDESNSDDNLGNYVKISQDNKPIGWIDSENVIDEKTMDSIENDE
                     ESIIPEELIDKVNDYVTIENNEFVLSNKAEDVLTSEEFVEVEGQIDQTNAEIEADETL
                     SETHIEGNIIVQEIYEDEPNQLLKASKKAYIKAKYTWWGMQIQFSHKAVVDFNDFYWG
                     AGTIGGLGANKRMGKFLAKKGIKIASRYAVCLSLFGGGLAWGMGKKDKGKGVNLNCVL
                     YVPATITTAK"
BASE COUNT          312 a           77 c          160 g          229 t
ORIGIN      
        1 acaatttgtt aatattgatg aaagtaattc tgatgataat ttgggtaact acgttaaaat
       61 aagccaagat aacaaaccta ttggttggat agactctgaa aatgtaattg atgaaaaaac
      121 tatggattct atagaaaatg atgaagaatc aattattccg gaagaattaa ttgataaagt
      181 aaatgattat gtaacaatag aaaacaatga atttgtattg tctaacaaag cggaagatgt
      241 tcttacttcg gaagagtttg ttgaagttga agggcagata gatcaaacta atgctgaaat
      301 cgaagctgat gaaacactat cagaaacaca tattgaggga aacataatag ttcaagaaat
      361 ctatgaagat gaaccaaatc aacttcttaa ggcatctaaa aaagcttata taaaagctaa
      421 atatacatgg tggggtatgc aaatccaatt ttctcataaa gctgttgttg attttaacga
      481 tttttattgg ggggcaggta cgataggtgg attaggtgca aataaacgaa tggggaaatt
      541 tttagcaaaa aaaggaataa aaatcgcatc acgttatgct gtttgtttga gtttatttgg
      601 tggtggttta gcatggggaa tgggtaaaaa agataaagga aaaggtgtaa atttaaattg
      661 tgtattatat gtccctgcga caataactac agctaaataa aagaaaagag tgtatacatg
      721 aaaagaaata aactaaagat aatatttcga ataatagagt tggtattggg aattttaa
//
LOCUS       DASDYO010000269          709 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.277, whole genome shotgun sequence.
ACCESSION   DASDYO010000269 DASDYO010000000
VERSION     DASDYO010000269.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 709)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 709)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..709
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.277"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(319..675)
                     /locus_tag="U0290_003053"
     CDS             complement(319..675)
                     /locus_tag="U0290_003053"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="VOC family protein"
                     /protein_id="HEM2303058.1"
                     /translation="MTLNAKSITIGLPVSDLEKSASWYEKLLMSDEKLVPVEGVIEYQ
                     IGSVWIQLFEEKINASKNVLCLEAENLEVEFERLKTLGIITNEVIEELSGILRYFDFT
                     DPDGNKLSFYWLYEQE"
BASE COUNT          254 a          146 c           79 g          230 t
ORIGIN      
        1 atattatcca caaaaatagt acgataataa aaaacggtta tcactcgaca taaaaaagcc
       61 ctagaaactc aataatgctg aggcttcagg gcttttttac taatacaact ccataatctg
      121 catataagct atagataact atcattaata atacaagatt aaaaaaatat taaaatctat
      181 aaaacgaaga caaaaaaaaa gtacacctaa tcgaaaaata atctctaact tatatttcac
      241 tccacttaag catcaaaaaa cgacgaatca attatccgtc gttttagcgt tacgctcatc
      301 atataatgct gtttaagtct attcttgttc gtataaccaa tagaatgata acttattacc
      361 atctggatca gtgaagtcaa aatatcgaag gatacctgat agctcttcta tcacctcgtt
      421 agttattatc ccaagtgttt ttaaacgttc aaattctact tctagatttt ctgcctctaa
      481 gcacaaaacg ttcttagaag cattgatttt ttcttcaaaa agttgaatcc aaaccgaacc
      541 aatttgatat tcaataaccc cttcaaccgg tactagtttt tcatcactca taagcagttt
      601 ttcataccag cttgcagatt tctccaaatc acttactggc agccctatag tgatactctt
      661 tgcatttaaa gtcataactt tttcctcctt ttcattagcc tacaattat
//
LOCUS       DASDYO010000270          687 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.278, whole genome shotgun sequence.
ACCESSION   DASDYO010000270 DASDYO010000000
VERSION     DASDYO010000270.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 687)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 687)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..687
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.278"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            321..596
                     /locus_tag="U0290_003054"
     CDS             321..596
                     /locus_tag="U0290_003054"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724239.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303059.1"
                     /translation="MKKQVRLKILKLDAKKSVGILTQQAREEIAMIQKGNEKIGDELK
                     FIQDKLADAFESRTAKAVQSWMKHIREEELEEQKEVLVICKESIRMD"
BASE COUNT          282 a           76 c          135 g          194 t
ORIGIN      
        1 ttttataatc cgaatgagtt tgaaaaatat tatgaaatga atcatcagac acgtagacta
       61 ttgaaaaatt ttcaaataga gcttgttgat gcagcgcagt cttttcgaga aacaaataca
      121 agtttaggag aatggatttc taataacaat taaaaggaag tgagattata tgtatagcaa
      181 tacttatcaa cgcgaatacg cacgtgcaat tggggataca tcttatgatt tgagctatca
      241 cttcaaatta ttgagcgaga actcaagaaa aaaatttaac tgccaaagaa cgttcgaatt
      301 tacttgtagc agaaagtact ttgaaaaaac aagttcgatt gaaaatctta aagctagatg
      361 caaaaaaatc agtaggaata ctaactcagc aagctagaga agaaatagct atgattcaaa
      421 aaggaaatga aaaaattgga gatgaattaa aatttattca agataaatta gcggatgcat
      481 ttgaatccag aactgcaaaa gctgttcaaa gttggatgaa gcatatccgg gaagaagaat
      541 tggaagagca aaaagaggtt cttgttattt gtaaagaaag tatcagaatg gattaatata
      601 gcggtgaagg ttatatttga aggatatatc acgtaaaata aaaatattga agatattgat
      661 agaaatttct tagtttttgt gtgagaa
//
LOCUS       DASDYO010000271          643 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.280, whole genome shotgun sequence.
ACCESSION   DASDYO010000271 DASDYO010000000
VERSION     DASDYO010000271.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 643)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 643)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..643
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.280"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            21..>643
                     /locus_tag="U0290_003055"
     CDS             21..>643
                     /locus_tag="U0290_003055"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465919.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303060.1"
                     /translation="MQKAIKIMLVLFLMTTVFLPFSNVRAASTDVVNIPDPYLNEGLK
                     SIVGNPFLTELTEANLETISVADISYMNGVPGYAVTGLISDLTGLEKAVNMTKLYFSN
                     QTEIKNLNQIKDLPNLKKIVGVTTGLNDIKALGEMPALEELELGGDYITDFTPLLEKD
                     NLKSFSYNSYAWLNPAYHQIDNEEFKKFTNLKSLESLDVTWNNITDLS"
BASE COUNT          239 a           99 c          101 g          204 t
ORIGIN      
        1 acaaggagga aattaaacat atgcaaaaag caatcaaaat aatgttagtt ttatttttaa
       61 tgacaaccgt atttttacct tttagtaatg ttcgggcagc atcaactgat gtagtaaata
      121 taccagatcc gtatttaaac gaaggtctta agagcatcgt aggaaatcca ttcttaaccg
      181 aattgactga agcgaatctt gaaaccatta gtgtcgctga tatctcttat atgaatggag
      241 tacctggtta tgctgtcact ggtttaatta gtgatttaac cggactcgaa aaagcagtta
      301 atatgaccaa attatatttt tcaaaccaaa cagaaattaa aaatttaaat caaataaaag
      361 atttacctaa tctgaagaaa attgttggtg ttactacagg tttaaatgat attaaagccc
      421 ttggtgaaat gcccgcactc gaagaactag aattaggtgg ggattatatt actgatttca
      481 ctcccttact tgaaaaagat aatttaaaat cattttctta taactcgtat gcttggttaa
      541 atccagcata tcaccaaatt gataatgaag aatttaaaaa atttacaaac cttaaatcac
      601 tcgaaagttt agatgtaact tggaataaca ttaccgactt atc
//
LOCUS       DASDYO010000272          631 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.281, whole genome shotgun sequence.
ACCESSION   DASDYO010000272 DASDYO010000000
VERSION     DASDYO010000272.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 631)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 631)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..631
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.281"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..>631)
                     /gene="gtfA"
                     /locus_tag="U0290_003056"
     CDS             complement(<1..>631)
                     /gene="gtfA"
                     /locus_tag="U0290_003056"
                     /EC_number="2.4.1.7"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014601614.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="sucrose phosphorylase"
                     /protein_id="HEM2303061.1"
                     /translation="DFFPPGRPNEKDLDLIYKRKDKAPFQEVEFADGGTELVWNTFGE
                     EQIDLDVTAEVTKEFIRQTIKNMAAHGCSILRLDAFAYAIKKLDTNDFFVEPEIWGLL
                     DEVKAEAAKYDMELLPEIHEHYSIQMKIANHDYYIYDFALPMVMLYSLYSGRVERLAK
                     WLEMSPMKQFTTLDTHDGIGVVDARDLLTDEELDYTSAELYKIGANVKKI"
BASE COUNT          194 a          137 c           86 g          214 t
ORIGIN      
        1 atatcttttt aacattagct cctattttgt ataattctgc tgaagtataa tcgagttcct
       61 catctgttaa taaatcgcgt gcatccacaa cgccaatgcc atcatgcgta tctaaagtag
      121 taaattgctt catcggactc atttctaacc atttagctaa acgttccact cggccactat
      181 ataacgagta cagcatcacc atgggtaacg caaaatcata gatataataa tcatggttcg
      241 cgattttcat ttggatggaa taatgttcat gaatttctgg taataattcc atatcatatt
      301 tggccgcttc tgctttcact tcatccagta aaccccaaat ttccggttct acaaaaaaat
      361 catttgtatc taatttttta attgcataag caaaggcgtc aagacgcaaa atagaacaac
      421 catgtgcagc catatttttt atcgtttgac gaataaattc ttttgtaact tcggctgtca
      481 catctaaatc aatttgttct tccccaaaag tattccaaac taattccgtt cccccatcag
      541 caaattcaac ttcttgaaaa ggcgccttat cttttctctt ataaattaaa tctaagtctt
      601 tttcatttgg tctacccgga ggaaagaaat c
//
LOCUS       DASDYO010000273          591 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.285, whole genome shotgun sequence.
ACCESSION   DASDYO010000273 DASDYO010000000
VERSION     DASDYO010000273.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 591)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 591)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..591
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.285"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(122..526)
                     /locus_tag="U0290_003057"
     CDS             complement(122..526)
                     /locus_tag="U0290_003057"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464258.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF4064 domain-containing protein"
                     /protein_id="HEM2303062.1"
                     /translation="MNPRKSEFVLTLIAGITGIIAGITGIAGGGLLAALSGSEELSNA
                     TAMTAADSEALAAAGGLTVIFSIIALVLGIALIVFAVLIKRNAKVFGILTLVAGVVGF
                     FLVGLLWIVPGVLAVIAGIMCLARKVPTDTFS"
BASE COUNT          220 a          121 c           83 g          167 t
ORIGIN      
        1 aaaccgacaa aataaattgt cagttttact ttaaaataaa tttattatct tttgagaact
       61 atttaaatca aaaaaactgc aacagaatga ttcctcatcc tattacagtc tagcattaag
      121 attagctaaa tgtgtcagtt ggtacttttc tcgctaggca cataatacct gcaataacag
      181 caagtacacc tggaacgatc catagtaatc ctactaagaa gaaacctaca acaccagcta
      241 ctagcgtcaa gataccgaat actttagcat tgcgtttaat taatacagca aaaacaatca
      301 aagcaatacc aagcactaaa gcaattatag agaaaattac tgttaaacca cctgcagcag
      361 caagtgcttc agagtcagca gcagtcatcg cagttgcgtt agataattct tcactgccag
      421 aaagagcagc aagtaaacct ccgcccgcga ttccagtaat accagcaata atacctgtaa
      481 ttcccgcaat taatgttaga acaaattctg attttcttgg attcattatg atataaacct
      541 cccttttaaa atagtcattt attagtataa cattaatttt gctagaaaat g
//
LOCUS       DASDYO010000274          590 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.286, whole genome shotgun sequence.
ACCESSION   DASDYO010000274 DASDYO010000000
VERSION     DASDYO010000274.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 590)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 590)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..590
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.286"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..573
                     /locus_tag="U0290_003058"
     CDS             <1..573
                     /locus_tag="U0290_003058"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466296.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ATP-binding cassette domain-containing protein"
                     /protein_id="HEM2303063.1"
                     /translation="EKVSLSIGAGEFIAVVGESGSGKTTLLNVIGHLDSKDSGQVIIN
                     EMEYQPKKEVMTLKKEVLGFIFQNYLLMENETVLENLSITGGKNRKLMIEHLEEVGMD
                     ESYLAKKVYQLSGGEKQRIAIVRILLKPFQLLLADEPTGNLDDKNKHKIIELFLALKK
                     QGKTIICVTHDPEISAKADRIIYIEGGEIR"
BASE COUNT          224 a           84 c          126 g          156 t
ORIGIN      
        1 gaaaaagtct ctctttctat tggagctggt gaatttattg cagtcgtcgg cgagagtggt
       61 agtgggaaga ccacgctgct gaatgttatc ggacacctag attcaaaaga tagtgggcaa
      121 gttattatta acgagatgga atatcagccg aaaaaagagg ttatgactct aaaaaaagag
      181 gtgttaggtt ttatattcca aaattatcta ttgatggaaa atgaaacagt gttagaaaac
      241 ttatccatta caggtggaaa aaatcgcaag ctgatgatag agcatttaga agaagtagga
      301 atggatgaaa gctatttagc aaaaaaagta taccaattaa gcggtggaga aaaacaacgg
      361 attgctattg tgcgcatttt actcaaacca tttcagttat tacttgcgga cgaaccaaca
      421 ggcaacttgg atgataaaaa caaacacaaa atcattgaat tatttttagc gttgaaaaaa
      481 caaggtaaaa caatcatttg tgtcacacat gacccagaaa tatctgcaaa agcagatcga
      541 atcatttaca ttgaaggagg cgaaataaga tgaaaattat cggtatttct
//
LOCUS       DASDYO010000275          565 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.288, whole genome shotgun sequence.
ACCESSION   DASDYO010000275 DASDYO010000000
VERSION     DASDYO010000275.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 565)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 565)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..565
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.288"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>565
                     /locus_tag="U0290_003059"
     CDS             <1..>565
                     /locus_tag="U0290_003059"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463988.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="helix-turn-helix domain-containing protein"
                     /protein_id="HEM2303064.1"
                     /translation="FQILETLLLASFPNLQALAKKVHVSYSGIKKEIKELNEELSERN
                     LYISTGNQVEIMGDEFSLRIFYTFLFLVAYSGDRWPFSFVRYDEITDLLESCPKEIYR
                     ANSIDKAMMIHYYVAMHLLRDRMNCQIDTTRQFKVALYKACTEESKKSESAFIKKVAK
                     QLPNRNYKEMTYTTQIILSTIVAFGSYS"
BASE COUNT          194 a           85 c          109 g          177 t
ORIGIN      
        1 tttcaaattc tcgaaacttt attgctggct tccttcccta atctacaagc attggcaaaa
       61 aaagtacatg tttcttattc tgggataaag aaagaaataa aagaattgaa tgaagagcta
      121 agtgaacgga acttgtatat ttctacagga aatcaggtag aaataatggg ggatgaattt
      181 tcattaagaa tattctatac cttccttttt ttagtcgcat atagcgggga tcgttggcca
      241 ttttcttttg ttcgatatga tgaaatcact gacttattag agagttgtcc aaaagaaatt
      301 tatagagcaa actcgataga taaggcgatg atgattcatt attatgtcgc tatgcattta
      361 ttaagagatc gaatgaattg tcaaattgat acaactaggc agtttaaagt ggccctatat
      421 aaggcttgca ccgaggagtc taagaaatca gaaagtgcgt tcattaaaaa ggtagcgaaa
      481 caacttccta ataggaacta taaagaaatg acctacacga cgcaaattat actgagtacc
      541 attgttgctt tcggtagtta ttctt
//
LOCUS       DASDYO010000276          555 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.290, whole genome shotgun sequence.
ACCESSION   DASDYO010000276 DASDYO010000000
VERSION     DASDYO010000276.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 555)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 555)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..555
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.290"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            38..>555
                     /locus_tag="U0290_003060"
     CDS             38..>555
                     /locus_tag="U0290_003060"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724378.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303065.1"
                     /translation="MEMKKLIKCTAPIFIATLIILPVSPSISALANETSEISEGINAT
                     EKTIETEELVVEEISNDEYQVLDKETNETTSIEFSKNHMQSTITNPDGTIDTMIKKDN
                     LIYLNGEVIGEEVKEESRQLLKASAYKYVTTFKTKMSLKKTSASIAVSLAGLLGGPVG
                     VFSTVAGMLLTL"
BASE COUNT          217 a           80 c          104 g          154 t
ORIGIN      
        1 ttacatgtgt aagacatata aaggagatgg tacataaatg gaaatgaaaa aacttattaa
       61 atgcactgca ccaatcttta ttgctacgct cattattttg cctgtttctc cgtctatttc
      121 agcattggcg aatgagacct cagagattag cgaagggatt aatgcaacag aaaaaacaat
      181 tgaaacagaa gagcttgtcg tagaagaaat tagtaatgat gaatatcaag tactggataa
      241 agagacaaat gaaacaactt caattgaatt ttcaaaaaat catatgcaat ctactattac
      301 aaatccagat ggcactatag acacaatgat taaaaaggat aacttaattt acctaaatgg
      361 tgaagttata ggtgaagagg taaaagaaga atcgagacaa ttattaaaag cctctgctta
      421 taaatatgtt acgacgttta aaacaaaaat gtcactaaag aaaacaagtg catctattgc
      481 agtgtcatta gctggtttgc ttggaggacc cgttggagta tttagtacag tagcaggtat
      541 gctactaaca ttgaa
//
LOCUS       DASDYO010000277          551 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.291, whole genome shotgun sequence.
ACCESSION   DASDYO010000277 DASDYO010000000
VERSION     DASDYO010000277.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 551)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 551)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..551
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.291"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..414)
                     /locus_tag="U0290_003061"
     CDS             complement(<1..414)
                     /locus_tag="U0290_003061"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465965.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YdcF family protein"
                     /protein_id="HEM2303066.1"
                     /translation="MRSLRKIVIILIIIGFMYLLIVAAFMFGGSRTKPSENADTVLIL
                     GAKVNGTPAVPSLVLQERLDAAVAYLNEYPKAKVIVSGGQGADESATEASVMEEYLVN
                     EGIARKRIETETKSKRTEENIKYSNAKFNLGKTVIV"
BASE COUNT          172 a          126 c           69 g          184 t
ORIGIN      
        1 cacaatcact gtttttccta aattaaattt cgcattacta tatttaatat tctcttctgt
       61 tctcttagat ttcgtttccg tttcaatccg ctttcttgca attccttcat taaccaaata
      121 ttcttccata acggaagctt cagtcgcact ttcatcagcc ccttggccac cactaacaat
      181 cactttcgcc tttggatatt cgtttaaata agcgactgcc gcatccaatc tttcttgcaa
      241 aactaatgaa ggaactgctg gggtcccatt cacttttgca cctaaaatca acactgtatc
      301 agcattttca cttggtttcg tcctagaacc accaaacata aaggccgcga cgattaataa
      361 atacataaaa ccaattatga ttaaaataat gacaattttc ctcagacttc tcatctagtt
      421 cgtcctccct acttcttaat taatagctta gcagaagatt ttaaataaaa gagaaagaaa
      481 taatcaagtt aagggaaatt taaaaaacac cccgaaacag ttttgaggtg tttttgcatt
      541 attagttcta c
//
LOCUS       DASDYO010000278          524 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.293, whole genome shotgun sequence.
ACCESSION   DASDYO010000278 DASDYO010000000
VERSION     DASDYO010000278.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 524)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 524)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..524
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.293"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..>524)
                     /locus_tag="U0290_003062"
     CDS             complement(<1..>524)
                     /locus_tag="U0290_003062"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463583.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="ATPase"
                     /protein_id="HEM2303067.1"
                     /translation="VIILLTISDSIVGFILVPGLNFKYDEIFNELLPTLIYCAGMLAN
                     LLVFSFLLRKLIEKVNISRFVEHRKYAYIIFSIVALTVLAFYMNIYAGSIAGFDGSVL
                     KINTLIFTGYTILLIVIVTVVINTATNELKVQNQKEQLEQLQDYVTTLESLHREMRVF
                     RHDYVNILSTLVGY"
BASE COUNT          199 a           99 c           68 g          158 t
ORIGIN      
        1 tatatccaac aagtgttgac aggatattca cataatcatg acgaaaaacg cgcatttctc
       61 tatgcaggga ctctaatgta gtaacataat cctgtaactg ttctagctgc tccttctgat
      121 tctgtacttt aagttcgttg gttgctgtat taataacaac cgtcactata actattaaca
      181 aaatggtgta ccctgtaaaa ataagggtat taatcttcaa aactgatcca tcgaatcccg
      241 ctattgatcc cgcataaatg ttcatataga atgctaagac agtaagagca acgatagaaa
      301 aaataatata tgcatatttt ctatgttcta caaatctaga aatattaact ttttcaatca
      361 attttctaag aagaaacgaa aataccaaca aattcgccaa cattcccgca caataaatta
      421 acgttggtaa cagttcatta aatatctcat catatttaaa gttcaagccc ggtactaaaa
      481 taaaacctac tatagaatca ctaatagtaa gtaaaataat aacc
//
LOCUS       DASDYO010000279          520 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.294, whole genome shotgun sequence.
ACCESSION   DASDYO010000279 DASDYO010000000
VERSION     DASDYO010000279.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 520)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 520)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..520
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.294"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            120..>520
                     /locus_tag="U0290_003063"
     CDS             120..>520
                     /locus_tag="U0290_003063"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724642.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="AAA family ATPase"
                     /protein_id="HEM2303068.1"
                     /translation="MKKKNVLNLIKYHSEKNDFQFRNEAIEIARYFDTIGDSQLSEYI
                     MSLLSTANTFVPQGEAFENLFFKKIEPNVEPLPLPKAISEDIRGIINAVNHHVGINKF
                     LFEGAPGTGKTETVKQIARLLERQLYMVEFS"
BASE COUNT          188 a           70 c           96 g          166 t
ORIGIN      
        1 atgctaagaa aggttctata aaaatacttg gttttaagtg ttttcgtgtt tttagtccca
       61 aaataattgt ttttgtccca atgtgtgcta taatatatag agaagggaag tgacttacta
      121 tgaagaaaaa gaatgtatta aatttaatta aatatcattc agaaaaaaat gattttcagt
      181 ttagaaatga ggctatcgaa attgctcgct attttgatac aataggtgac agtcaattat
      241 cggaatacat catgagtttg ttatctacag caaatacctt tgtgccgcaa ggtgaggctt
      301 ttgagaactt atttttcaaa aaaatagaac ctaatgtaga accattacca ctccctaaag
      361 caattagtga agatattcga ggtattataa atgctgtaaa tcatcatgta ggaataaata
      421 aatttctctt cgagggtgca cctggaactg gaaagacaga aacggttaaa cagattgctc
      481 gattattaga acgccaacta tatatggtag aatttagcga
//
LOCUS       DASDYO010000280          517 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.295, whole genome shotgun sequence.
ACCESSION   DASDYO010000280 DASDYO010000000
VERSION     DASDYO010000280.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 517)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 517)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..517
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.295"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..432
                     /gene="llsY"
                     /locus_tag="U0290_003064"
     CDS             <1..432
                     /gene="llsY"
                     /locus_tag="U0290_003064"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="listeriolysin S biosynthesis cyclodehydratase
                     LlsY"
                     /protein_id="HEM2303069.1"
                     /translation="GFNKLMKETNSVNTIAFFDNENVFVTCIEHGETGCYECLEQQLL
                     SHFDGVVTDYLVQSENNVSTAELMFVLSIIKKEIENTSIYGQSSLLGNLLHFNFNNYE
                     YTFNTNRIQSCCSTCATFNNILFEEQNIRSVNILKELMSSD"
BASE COUNT          181 a           68 c           94 g          174 t
ORIGIN      
        1 ggatttaaca agttaatgaa agagactaac agtgttaata ccatcgcatt ttttgataat
       61 gaaaatgtat ttgttacttg tatagaacat ggagaaactg gctgctatga gtgtttagag
      121 cagcaactac tctctcattt tgatggtgtt gttacggatt atttagtaca gtcagaaaat
      181 aatgtttcca cagctgaatt gatgtttgtt ctttcaatca taaaaaaaga aatcgaaaat
      241 acctctattt atggtcaatc ttctctgtta ggcaatcttc tccactttaa ttttaataac
      301 tacgagtata cgtttaatac aaatagaatc caaagttgtt gttctacctg tgctactttc
      361 aataatatat tatttgaaga gcaaaacatt cggtcagtga atatactaaa ggagctgatg
      421 agtagtgatt agcatacaaa ataatttgga atataacaag ttacgttggg aaactttgag
      481 tggaaatgta acaggaatat gggagaataa taagttc
//
LOCUS       DASDYO010000281          510 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.296, whole genome shotgun sequence.
ACCESSION   DASDYO010000281 DASDYO010000000
VERSION     DASDYO010000281.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 510)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 510)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..510
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.296"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>510
                     /locus_tag="U0290_003065"
     CDS             <1..>510
                     /locus_tag="U0290_003065"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463835.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="DUF3883 domain-containing protein"
                     /protein_id="HEM2303070.1"
                     /translation="DNDLLSQDLLQMLTVFKELKGHLMLDDKKGIEATIDFIINNGTF
                     NELSEKTKSKKIFEIEKKRTLVLGKEETRSRYSLVKEEKAPYITKRDYAKEAIRNTEK
                     GLQGEYLVINYERERLMKNTITKSYADKITHVSESGDGHGYDIISYDINPDASNEVIE
                     IYIEVKTTTG"
BASE COUNT          220 a           55 c           94 g          141 t
ORIGIN      
        1 gataatgatt tattatcaca agatttgctg caaatgctca ctgtatttaa agaattaaaa
       61 ggtcatttaa tgttggatga caaaaaaggt atagaagcta caattgattt cataattaat
      121 aatggaactt tcaatgaatt aagcgaaaaa acaaaatcaa agaaaatctt tgaaatagaa
      181 aaaaagcgca cattagtttt aggtaaagaa gaaacacgtt caagatattc gttagttaag
      241 gaagaaaaag caccttacat cactaaaaga gattatgcga aagaagctat tagaaatacg
      301 gaaaaaggat tgcaaggaga gtatttggta attaattatg aaagagaaag gttaatgaag
      361 aatactatta caaaatctta tgcagataaa atcactcatg tttctgaaag tggtgatggg
      421 catggatatg atattatttc ctatgacata aatccagatg catcaaatga agtgattgag
      481 atttatatcg aagttaaaac aacgacagga
//
LOCUS       DASDYO010000282          508 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.297, whole genome shotgun sequence.
ACCESSION   DASDYO010000282 DASDYO010000000
VERSION     DASDYO010000282.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 508)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 508)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..508
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.297"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..364)
                     /locus_tag="U0290_003066"
     CDS             complement(<1..364)
                     /locus_tag="U0290_003066"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_463840.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303071.1"
                     /translation="MANTLKQTLRSGEMYMVRKFFGYIGTRRFNIYEALVYRNRYSLK
                     NKEKLIFYDGTSKIKQKIAPKSGSKNGRSPHFAYYPNSSHDGVGKEMTVTHKAYQEAI
                     STLKIFCIETLDGEVIILE"
BASE COUNT          158 a          103 c           45 g          202 t
ORIGIN      
        1 cttcaagtat aattacttca ccatctaatg tttctataca aaaaattttc aaagtagata
       61 tagcctcttg gtatgcctta tgtgtaacag tcatttcctt tcctactcca tcatgagacg
      121 aatttggata atatgcaaaa tgaggacttc ttccattttt gcttccactt ttcggtgcaa
      181 tcttttgctt tattttactt gttccatcat aaaaaattaa cttctcttta ttctttaaac
      241 tatacctatt tctataaact aatgcttcgt atatattaaa tcttctggtt cctatatatc
      301 caaaaaattt ccttaccata tacatctcac cacttcttag tgtttgtttt aaagtatttg
      361 ccattcaaac tctgcttatc aagaaaacaa gaagcataac aaacgttcgc ctcttcctat
      421 ctttttaaat aaacttactc ttctaaaatc cattaattat gataccttcc acttttttat
      481 gaaatatcaa atctaatgct agaattta
//
LOCUS       DASDYO010000283          502 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.299, whole genome shotgun sequence.
ACCESSION   DASDYO010000283 DASDYO010000000
VERSION     DASDYO010000283.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 502)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 502)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..502
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.299"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..>502)
                     /locus_tag="U0290_003067"
     CDS             complement(<1..>502)
                     /locus_tag="U0290_003067"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_466297.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="bacteriocin immunity protein"
                     /protein_id="HEM2303072.1"
                     /translation="AQYTFLDERDLNIYASNPQYSPNIKLEKGDYPDKNRFLVNRESG
                     DEKQSGVIYHPSKYWSLKVYDFGQIKNVGLSDTFYVSGLDNQDTYQAFLKEFEQYGEI
                     TTKSVDVSWWKYINIPLLMTLLLCFAILFVFTYYYLRYSKQRLLVNRIWGNSELVTLM
                     SLFNKTI"
BASE COUNT          180 a          100 c           64 g          158 t
ORIGIN      
        1 tatagtttta ttgaacaaag acattaatgt aactaattca gaattccccc atatacgatt
       61 aactaataac cgttgtttag agtatcttaa atagtaatat gtaaaaacaa acaaaatagc
      121 aaaacacaaa agcaaagtca taagtaacgg gatattaata tatttccacc agctcacatc
      181 aacacttttc gtagttattt ccccgtactg ttcaaattcc tttaaaaaag cctgatacgt
      241 atcctggtta tctaagccgc ttacataaaa agtatcactt agacccacat ttttaatctg
      301 tccaaagtca taaaccttta aagaccaata cttagaagga tgataaatca cacccgattg
      361 tttttcatcg ccactttccc gattcaccaa aaaccgattt ttatcgggat aatctccttt
      421 ttcaagcttt atatttggtg aatactgggg attagaggca taaatattca aatcgcgttc
      481 atctaaaaat gtatactgcg ct
//
LOCUS       DASDYO010000284          493 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.300, whole genome shotgun sequence.
ACCESSION   DASDYO010000284 DASDYO010000000
VERSION     DASDYO010000284.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 493)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 493)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..493
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.300"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..479
                     /locus_tag="U0290_003068"
     CDS             <1..479
                     /locus_tag="U0290_003068"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724637.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="helix-turn-helix transcriptional regulator"
                     /protein_id="HEM2303073.1"
                     /translation="AIGDNIRKFRKLKGMTQKELGLALGFDKKTADIRIAQYESGTRK
                     PKEDMINDLSKIFDIRTDALTTPNIDSYVGLMHTLFSIEDTYGLKIIDGDDGISLKLD
                     KNSKSFHTLYDSFLSWQKEAEKFENEEITLEEYNHWRFNYPKVEAEKTKSKRDQSK"
BASE COUNT          200 a           66 c           84 g          143 t
ORIGIN      
        1 tggcaattgg agataacata agaaagtttc gtaagctcaa aggtatgact caaaaagaat
       61 taggtttagc tctaggcttt gataaaaaaa cagctgatat tcgtattgca caatatgaaa
      121 gtggaacaag aaaaccaaaa gaagatatga ttaatgattt atcaaaaatt tttgatattc
      181 gtaccgatgc tcttactaca ccaaatattg atagctatgt cggtcttatg cataccttat
      241 tttcaattga ggatacttat ggtttaaaga ttatagatgg tgatgatggc atttctttaa
      301 agcttgataa aaattcaaaa tcattccaca ctctgtatga ttcttttctt tcttggcaaa
      361 aagaagctga gaaatttgag aatgaagaaa taactttgga agaatacaat cactggcgat
      421 ttaattatcc aaaagtagaa gcagaaaaaa caaaatcaaa acgagatcag tcgaaataaa
      481 aacgcaaaaa aaa
//
LOCUS       DASDYO010000285          429 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.302, whole genome shotgun sequence.
ACCESSION   DASDYO010000285 DASDYO010000000
VERSION     DASDYO010000285.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 429)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 429)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..429
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.302"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(68..304)
                     /locus_tag="U0290_003069"
     CDS             complement(68..304)
                     /locus_tag="U0290_003069"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465653.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303074.1"
                     /translation="MQEQDIRYYVLPTIIIFILGIAAMNASSFPFISFLTTTLVAIAI
                     GIIIGGAHQLIRLIIKTYQQTKERRVSQKKWQTL"
BASE COUNT          147 a           76 c           66 g          140 t
ORIGIN      
        1 acaaaaaaag cattctcatt aaaagtctga aaatgcttgg tttattatga atatgtaatg
       61 agtcatttta tagtgtttgc cacttttttt gagagactct gcgttccttc gtttgttgat
      121 aagttttaat aatcaatcta attaattgat gagctccgcc aataataatt ccaatagcga
      181 tagcaacgag cgtagttgtc agaaaactaa taaatggaaa actagatgca ttcattgcag
      241 caattcctaa tataaaaatg ataatagtag gtagtacata atacctaatg tcctgttcct
      301 gcatacaaag cgctccttta cccaaaataa taactcccat caactactga aattataacg
      361 cgaaaactgg cttttttcaa ggcttggatg gatttccatg ctcctcttta aaaacgttaa
      421 atggctcta
//
LOCUS       DASDYO010000286          423 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.303, whole genome shotgun sequence.
ACCESSION   DASDYO010000286 DASDYO010000000
VERSION     DASDYO010000286.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 423)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 423)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..423
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.303"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>423
                     /locus_tag="U0290_003070"
     CDS             <1..>423
                     /locus_tag="U0290_003070"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_014600431.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="leucine-rich repeat domain-containing protein"
                     /protein_id="HEM2303075.1"
                     /translation="ANDNQLSDISALANVTSLHQLRLAGNQIKQLNGVSNLINLETIE
                     LSNNQITDISPVSGLKNLIGLGIDYNDISDLSPIAGLAKLSHLTADNNQISDLSPISS
                     LGAMEIMRLDGNQISDVTPIANLANLNYVFLAENQISD"
BASE COUNT          164 a           59 c           76 g          124 t
ORIGIN      
        1 agcaaatgac aatcaattaa gcgatataag tgcactagca aatgtgacaa gtttgcacca
       61 attaagatta gctggaaatc aaataaaaca gttaaatgga gttagtaatt taatcaattt
      121 agaaaccata gaactaagca acaatcaaat aacggatata agcccagttt caggtttgaa
      181 aaacttaatt ggtcttggaa tagattataa tgatatcagt gatttaagcc caattgctgg
      241 cttagcaaag ttaagtcatt taactgcaga caataaccaa ataagtgatt tgagtcctat
      301 ttcaagctta ggggctatgg aaattatgcg actagatgga aatcagatta gtgatgtaac
      361 cccaattgcg aatttggcta atttaaacta tgtattttta gctgaaaatc aaatcagtga
      421 tat
//
LOCUS       DASDYO010000287          404 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.304, whole genome shotgun sequence.
ACCESSION   DASDYO010000287 DASDYO010000000
VERSION     DASDYO010000287.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 404)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 404)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..404
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.304"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            111..296
                     /locus_tag="U0290_003071"
     CDS             111..296
                     /locus_tag="U0290_003071"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003724379.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303076.1"
                     /translation="MKKVKMEKWLIGVYALVVLMCIIIYFATESIILLLLGFIALLGT
                     GFQTLRYRNAKKSIKAK"
BASE COUNT          136 a           52 c           71 g          145 t
ORIGIN      
        1 aatgattatt ctatttataa aaaatctaac tatactggac tgcttaagac atttacacat
       61 aaatatcgtc cgtacggttg aaaattgata tagtattgga ggcttaggtt atgaaaaaag
      121 tgaaaatgga aaagtggctc attggtgtat atgcccttgt agtattaatg tgtattatta
      181 tttactttgc aacagaaagt ataatcttat tgttactagg gttcatagct cttcttggaa
      241 caggattcca aactttaaga taccgaaatg caaagaaatc aatcaaagct aaataaacaa
      301 aatgtaggtt gggataaaat tatcctgcct actttttatt tatgtgtaga attcttttaa
      361 tcattcccac ttggttttga gtgcgtttgt tcgtaagatg ttat
//
LOCUS       DASDYO010000288          396 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.305, whole genome shotgun sequence.
ACCESSION   DASDYO010000288 DASDYO010000000
VERSION     DASDYO010000288.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 396)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 396)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..396
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.305"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            20..>396
                     /locus_tag="U0290_003072"
     rRNA            20..>396
                     /locus_tag="U0290_003072"
                     /product="23S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF02541"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF02541"
BASE COUNT          128 a           74 c          115 g           79 t
ORIGIN      
        1 tacttcgtag aagtaaattg gttaagttag aaagggcgca cggtggatgc cttggcacta
       61 ggagccgaag aaggacggga ctaacaccga tatgctttgg ggagctgtac gtaagcgttg
      121 atccagagat ttccgaatgg gggaacccac tatctttagt cggatagtat ccttacgtga
      181 atacatagcg tgaggaaggc agacccaggg aactgaaaca tctaagtacc tggaggaaga
      241 gaaagaaaaa tcgatttcct gagtagcggc gagcgaaacg gaaagagccc aaaccaagaa
      301 gcttgcttct tggggttgta ggacactcta tacggagtta caaaagaaag ttataaatga
      361 agcggtctgg aaaggcccgc caaagacggt aacagc
//
LOCUS       DASDYO010000289          390 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.306, whole genome shotgun sequence.
ACCESSION   DASDYO010000289 DASDYO010000000
VERSION     DASDYO010000289.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 390)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 390)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..390
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.306"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(207..353)
                     /locus_tag="U0290_003073"
     CDS             complement(207..353)
                     /locus_tag="U0290_003073"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464376.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303077.1"
                     /translation="MDNNQKDLNQVIRQLKEKGIVVEKTKSRKDIWKAVSNKAMPNMT
                     LRLQ"
BASE COUNT          122 a           77 c           39 g          152 t
ORIGIN      
        1 tctatttcta ttttcttcta tgacaaaagc cttccattcc atcatacaac atttttgcgt
       61 aaaaaggata acagaaacat caaaacttaa tgactaattt atgacaaaga aaaaaagtga
      121 agttatttta tatgtaaatc atgctgcttt gagtcatttt acttcaaagc ctcacaaaat
      181 atcacataaa aactccactt ttcgatttac tgcaatcgaa gtgtcatatt cggcatcgct
      241 ttattactaa ccgctttcca aatatctttt cgtgattttg ttttttcaac tactattcct
      301 ttttctttga gctgacgaat tacttgattc aagtcttttt gattattatc caaactcatc
      361 actccatctt caaaatttgt tttcattctt
//
LOCUS       DASDYO010000290          385 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.307, whole genome shotgun sequence.
ACCESSION   DASDYO010000290 DASDYO010000000
VERSION     DASDYO010000290.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 385)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 385)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..385
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.307"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
BASE COUNT          156 a           42 c           78 g          109 t
ORIGIN      
        1 ttatttaaaa aacaaatatg aatgattaat tacaaggtct aagaaacagt ggtaaatgat
       61 atgctagaac catgaacgat atgaacggca agcgagcgtc cgtggttttt tagcaacata
      121 aattattaca gaaatatggg actggtaaaa agaacgagag taaagttaaa aacttggttg
      181 atgattggag atatatcgct ttccataaaa aatatagaaa agagatggaa tttgatccga
      241 aaatcaatca agacggaata aaactgttcc accagacttt aaactctgat tgtgtagaga
      301 tataaagtaa tttgggtagt ctaagatgga aaatttatct tagactactt aatgtacata
      361 aggattttga ggtttgaaaa gagta
//
LOCUS       DASDYO010000291          372 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.308, whole genome shotgun sequence.
ACCESSION   DASDYO010000291 DASDYO010000000
VERSION     DASDYO010000291.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 372)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 372)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..372
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.308"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            complement(<1..>372)
                     /locus_tag="U0290_003074"
     CDS             complement(<1..>372)
                     /locus_tag="U0290_003074"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_012681220.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=2
                     /transl_table=11
                     /product="teichoic acid biosynthesis protein"
                     /protein_id="HEM2303078.1"
                     /translation="NEFLSGPINRADATWDFFLRSANMPDLPILAPNTIDFSSSGFFN
                     VANNEFMAQLTRNDSNNLACLTAVAPKIKQDITKIAVMGTCFSRNAFNSSPFFNPDYK
                     AFFECSFTQFHSSIISIMTEPA"
BASE COUNT          126 a           57 c           74 g          115 t
ORIGIN      
        1 gcgggttcgg tcattatact aattatagaa gaatgaaact gcgtaaaact gcattcaaaa
       61 aaagctttat aatctggatt aaagaatgga gatgagttaa aagcatttcg gctaaaacaa
      121 gttcccatta cagctatttt tgttatatct tgtttgattt taggagcaac ggctgtaaga
      181 caagctaaat tattggagtc gtttcttgtt aattgcgcca taaattcgtt attagcaaca
      241 ttgaaaaatc ccgaagaact aaagtcaata gtatttggcg ctaaaatagg taaatctggc
      301 atgtttgccg aacgaaggaa gaaatcccat gtcgcatcag ctctattgat tggtccggat
      361 aagaattcat tt
//
LOCUS       DASDYO010000292          364 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.310, whole genome shotgun sequence.
ACCESSION   DASDYO010000292 DASDYO010000000
VERSION     DASDYO010000292.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 364)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 364)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..364
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.310"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
BASE COUNT          127 a           58 c           77 g          102 t
ORIGIN      
        1 gcttgccgcg cgtcattcac ttctaaatca attgaaatat taccgtttgt tccgtatttt
       61 tcacatgact tttttggatt gggtagtagt ccgaaagatg ttattataga taaagcatat
      121 gtgcctgaat agcgcgcaaa aaacaaggtg aagtatcaaa atcatgaata tctcactcga
      181 aacgaatggc tgaatttatt tgaatagaat caattaccat tggtggaaga gctagaggga
      241 accccggaag tggactttga actggaaaag aaacaatgag taacaagagc caatggagcg
      301 aatacgatga cttagaggaa catcttattg cagttacatg gattttacat aaaaagtaac
      361 attc
//
LOCUS       DASDYO010000293          348 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.311, whole genome shotgun sequence.
ACCESSION   DASDYO010000293 DASDYO010000000
VERSION     DASDYO010000293.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 348)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 348)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..348
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.311"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            170..>348
                     /locus_tag="U0290_003075"
     rRNA            170..>348
                     /locus_tag="U0290_003075"
                     /product="16S ribosomal RNA"
                     /inference="COORDINATES: nucleotide
                     motif:Rfam:12.0:RF00177"
                     /inference="COORDINATES: profile:INFERNAL:1.1.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: cmsearch."
                     /db_xref="RFAM:RF00177"
BASE COUNT          116 a           63 c           90 g           79 t
ORIGIN      
        1 agaagaagac gaaaagcaat gagacgtaaa gtctcactgg taatcgcagg gcagaaaaca
       61 gaaagctgtt ttcaacaaaa caaactagta atttaattgc tagcgaagtc aatttgacgc
      121 aaggaatctt attcacggtg ttgaataagt attcaaattc aatttatatt ttaaagagag
      181 tttgatcctg gctcaggacg aacgctggcg gcgtgcctaa tacatgcaag tcgaacgaac
      241 ggaggaagag cttgctcttc caaagttagt ggcggacggg tgagtaacac gtgggcaacc
      301 tgcctgtaag ttggggataa ctccgggaaa ccggggctaa taccgaat
//
LOCUS       DASDYO010000294          331 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.313, whole genome shotgun sequence.
ACCESSION   DASDYO010000294 DASDYO010000000
VERSION     DASDYO010000294.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 331)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 331)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..331
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.313"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>331
                     /locus_tag="U0290_003076"
     CDS             <1..>331
                     /locus_tag="U0290_003076"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726408.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303079.1"
                     /translation="KLDKTISKAIVDGTLKGYLQYLEERKSKKETMNVSGAYAWTKGN
                     HIDDQVSKIGQMKNVQFKIEKAGYTWEYLQFTVSENSEDYMVIVKNSRRVQKSFDEQK
                     KKTNEDN"
BASE COUNT          146 a           35 c           64 g           86 t
ORIGIN      
        1 ttaaattaga taaaacaatt agtaaagcaa tagttgatgg aactttaaaa ggttatttac
       61 agtatcttga agagagaaaa agcaaaaaag agacaatgaa tgttagtggc gcttatgctt
      121 ggacaaaagg aaatcatatc gatgaccaag tttctaaaat tggacaaatg aaaaatgtcc
      181 agtttaaaat cgaaaaagct ggctacacat gggaatactt gcagtttaca gttagcgaga
      241 attcagaaga ttatatggtt atcgtaaaaa attctagaag agtacaaaaa tcttttgatg
      301 agcaaaaaaa gaaaacaaat gaggataatt a
//
LOCUS       DASDYO010000295          326 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.315, whole genome shotgun sequence.
ACCESSION   DASDYO010000295 DASDYO010000000
VERSION     DASDYO010000295.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 326)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 326)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..326
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.315"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>326
                     /locus_tag="U0290_003077"
     CDS             <1..>326
                     /locus_tag="U0290_003077"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003726064.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="HNH endonuclease"
                     /protein_id="HEM2303080.1"
                     /translation="PELIEGAHIWPVADIKADKSIPNDQKLNYAIDGHNGIWLCENHH
                     KMFDEGLIRIEHDGTIRLKDDLNDNDKSFIITTTTNTLLPDGVISEEAEIYLAKRDEA
                     STYEAS"
BASE COUNT          125 a           43 c           65 g           93 t
ORIGIN      
        1 ttccagaatt aattgaaggg gcacatatct ggcccgttgc tgatattaaa gcggataaat
       61 ctataccgaa tgatcaaaaa cttaattatg cgattgatgg acacaatgga atttggttat
      121 gtgaaaacca tcataaaatg ttcgatgaag gtttaattag aattgaacat gacggaacaa
      181 ttagattaaa agatgatttg aacgataatg ataaaagttt tattattact acaacgacaa
      241 acacactttt acctgatggt gtaattagtg aggaagcaga aatatatcta gccaaaaggg
      301 atgaggcaag tacttatgaa gcttca
//
LOCUS       DASDYO010000296          323 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.317, whole genome shotgun sequence.
ACCESSION   DASDYO010000296 DASDYO010000000
VERSION     DASDYO010000296.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 323)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 323)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..323
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.317"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..>323
                     /locus_tag="U0290_003078"
     CDS             <1..>323
                     /locus_tag="U0290_003078"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003769972.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303081.1"
                     /translation="EDSATFIFADERKGASTLTYAHFIINNMHAIDEKTLGSCIGRED
                     EDEKTIFENDIVQVVLEHWPMGYYQEVEYIGVVKYDTDICAYYLDLIKPPAVSGETIP
                     DEIDG"
BASE COUNT          111 a           50 c           73 g           89 t
ORIGIN      
        1 ttgaggatag cgctactttc atttttgcag atgaacgaaa aggcgctagc acattaactt
       61 atgcacattt tattattaat aacatgcacg cgatagacga aaaaacactt ggaagctgta
      121 taggtcgcga agatgaagac gaaaaaacta tttttgaaaa tgacattgtg caagtagttt
      181 tagaacactg gccaatggga tactaccaag aagtagaata cattggagtg gttaaatatg
      241 acacggatat atgtgcgtat tatcttgatt tgattaagcc tcctgctgtt agtggcgaaa
      301 cgataccgga tgaaatcgac gga
//
LOCUS       DASDYO010000297          314 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.denovo.319, whole genome shotgun sequence.
ACCESSION   DASDYO010000297 DASDYO010000000
VERSION     DASDYO010000297.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 314)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 314)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..314
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.denovo.319"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..171
                     /locus_tag="U0290_003079"
     CDS             <1..171
                     /locus_tag="U0290_003079"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725056.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303082.1"
                     /translation="ASWNKLYSAAQQSTAASNQANIYLSVSADINIVGVGSVDVNTGL
                     DGIIYLTKEVTT"
     gene            168..>314
                     /locus_tag="U0290_003080"
     CDS             168..>314
                     /locus_tag="U0290_003080"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_003725055.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303083.1"
                     /translation="MSELIKVFKYDDNGVFERDDLIILKKGEKIPDGYTLIEPPVPAI
                     NPVFN"
BASE COUNT          107 a           49 c           72 g           86 t
ORIGIN      
        1 gcgagctgga ataaacttta ttccgctgca cagcagagta cggcagcaag taatcaagcg
       61 aatatatatc taagtgtgag cgctgatata aatatcgttg gagttggttc ggtagacgtg
      121 aacaccggac ttgatggcat aatttattta actaaagagg tgacaacatg agcgagttaa
      181 taaaagtttt taaatatgat gacaacggcg tatttgagcg tgacgactta attattttaa
      241 aaaaagggga gaagattccg gatggctata cactaattga accaccagta ccagcaatta
      301 atccggtttt taat
//
LOCUS       DASDYO010000298         4857 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.guided.166, whole genome shotgun sequence.
ACCESSION   DASDYO010000298 DASDYO010000000
VERSION     DASDYO010000298.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 4857)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 4857)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..4857
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.guided.166"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..348
                     /locus_tag="U0290_003081"
     CDS             <1..348
                     /locus_tag="U0290_003081"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465231.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="YihY/virulence factor BrkB family protein"
                     /protein_id="HEM2303084.1"
                     /translation="EDFLSFWNNLRWTVTLIVIFVVFTFLYWVAPNRRSTLISVLPGA
                     LFSTIGWTVASLGFAYYVNNFGNYSATYGSIGVIIILMLWFYLTGIILMIGGELNATL
                     AIRKKKKELGEIN"
     gene            complement(378..1022)
                     /locus_tag="U0290_003082"
     CDS             complement(378..1022)
                     /locus_tag="U0290_003082"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465230.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="deoxynucleoside kinase"
                     /protein_id="HEM2303085.1"
                     /translation="MEGVGNKVIVLAGMIGAGKSSYTELIANELGTKAFYESIKDNRI
                     LEMFYEDPKRWAFALQIYFLNTRFRSIKAALTDQNNVLDRSIYEDALFTQINFEEGNI
                     SEPEMDTYLDLLDNMMEELAYMPKKAPDLLIYLRGSLDTVLSRIALRGRPYEQTFDNP
                     GLLDYYKHLHSRYDSWFESYDKSETLVINIDEIDINQPNDADYVMQLIHEKLKR"
     gene            1129..1509
                     /locus_tag="U0290_003083"
     CDS             1129..1509
                     /locus_tag="U0290_003083"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465229.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="OsmC family protein"
                     /protein_id="HEM2303086.1"
                     /translation="MTKPLKLVYTENGFDTGSFLIDDKLTEYSPADLMLMSIASCSAI
                     VFRNILKKKRVNFTDLWVDATMERIPEEENRISAIHLHFKITGAALDPKALEKALKLT
                     PKYCSMVRSVEKSILVDESLEIMP"
     gene            1574..2953
                     /gene="rlmD"
                     /locus_tag="U0290_003084"
     CDS             1574..2953
                     /gene="rlmD"
                     /locus_tag="U0290_003084"
                     /EC_number="2.1.1.190"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465228.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="23S rRNA (uracil(1939)-C(5))-methyltransferase
                     RlmD"
                     /protein_id="HEM2303087.1"
                     /translation="MNQNPVEEGQKFPLTIRRMGINGEGIGYFKKAVVFVPGAITGEE
                     VVVEAVKVRDRFTEAKLNKIRKKSPNRVTAPCPVYEACGGCQLQHVAYSAQLELKRDI
                     VIQSIEKHTKIDPTKLKIRPTIGMEDPWRYRNKSQFQTRMVGSGQVETGLFGANSHQL
                     VPIEDCIVQQPVTIKVTNFVRDLLEKYGVPIYDEKAGSGIVRTIVVRTGVKTGETQLV
                     FITNSKKLPKKREMLAEIEAALPEVTSIMQNVNQAKSSLIFGDETFLLAGKESIEEKL
                     MELEFDLSARAFFQLNPFQTERLYQEVEKALVLTGSETLVDAYCGVGTIGQAFAGKVK
                     EVRGMDIIPESIEDAKRNAEKNGIENVYYEVGKAEDVLPKWVNEGFRPDAVIVDPPRS
                     GCDQGLIKSLLDVEAKQLVYVSCNPSTLARDLALLAKKYRIRYMQPVDMFPQTAHVET
                     VVLLQLKDK"
     gene            2968..3369
                     /locus_tag="U0290_003085"
     CDS             2968..3369
                     /locus_tag="U0290_003085"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:WP_010989789.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="fosfomycin resistance thiol transferase FosX"
                     /protein_id="HEM2303088.1"
                     /translation="MISGLSHITLIVKDLNKTTAFLQNIFNAEEIYSSGDKTFSLSKE
                     KFFLIAGLWICIMEGDSLQERTYNHIAFQIQSEEVDEYTERIKALGVEMKPERPRVQG
                     EGRSIYFYDFDNHLFELHAGTLEERLKRYHE"
     gene            3398..3751
                     /locus_tag="U0290_003086"
     CDS             3398..3751
                     /locus_tag="U0290_003086"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465226.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303089.1"
                     /translation="MKKLFDETNEFEAKYYRTIWYGYIDNEFAPELSDEIKQLIQSDL
                     TEKTANPIEATHWVFYSETQAGDAIGDKVRSSIMVRHRDNKFVVHYNVSDFQFVTVFD
                     VATAFKDQLEQALNA"
     gene            complement(3791..3997)
                     /locus_tag="U0290_003087"
     CDS             complement(3791..3997)
                     /locus_tag="U0290_003087"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465225.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="hypothetical protein"
                     /protein_id="HEM2303090.1"
                     /translation="MKLIGKHPSGRAIIIRLNNQEYHYETANSFGSATSLTRAKTEAR
                     ADSFTSSEMNQGLHIGNWHWKELG"
     gene            complement(4025..>4857)
                     /locus_tag="U0290_003088"
     CDS             complement(4025..>4857)
                     /locus_tag="U0290_003088"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_465224.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="PAS domain S-box protein"
                     /protein_id="HEM2303091.1"
                     /translation="RFDTNKKVTYANALFAEAMGYSEEEMLTLSHPDLCFPDFVQSAS
                     YKAMWTNLLAGQKFQNKIERKNARGERVWFEATYIPIIREDTVVGVAKIATDITRREE
                     TVHDFASGLKSMATNLKEHSSVGKTRSEALLELVKSITKESNENTDTLHDLQTEAQNI
                     HGIINTINGIASQTNLLALNAAIEAARAGDAGRGFSVVAEEVRKLSSRVEEAIKEVEK
                     SVNGITQEINTISSGTERVEAKVEESQEVLILSLEDFSQIESASTALDQNAGAFTKMI
                     "
BASE COUNT         1535 a          950 c          926 g         1446 t
ORIGIN      
        1 gaagactttc ttagcttttg gaataatctt cgttggaccg ttacactcat cgttattttt
       61 gtcgtattta cctttttata ttgggtcgca ccaaaccggc gcagtacgtt gattagtgtt
      121 ctacctggag cgcttttttc aacaatcggt tggacagttg cttcgctagg ttttgcgtat
      181 tacgtaaata atttcggcaa ctattcagcc acatatggca gtatcggtgt aattattatt
      241 ttaatgttat ggttttattt gaccggcatt attttgatga ttggcgggga gcttaacgct
      301 acactggcga ttcggaaaaa gaaaaaagaa ttaggcgaaa tcaattaaaa aaacgctaaa
      361 acagcaaaaa gcctgtttta gcgttttaat ttttcatgaa taagttgcat gacataatct
      421 gcgtcatttg gttgattaat atctatttcg tcgatattaa taacaagggt ttcactctta
      481 tcataagact caaaccagct gtcataacga ctatgcagat gcttgtaata gtcaagtaaa
      541 cctggattat caaaggtttg ttcataagga cgaccacgga gagcaattcg gctcaataca
      601 gtgtctaaac ttcctcgcaa ataaatcaac aaatcaggcg cttttttcgg catataagca
      661 agttcttcca tcatattgtc gagtaaatca aggtatgtat ccatctcagg ctccgaaatg
      721 ttaccttctt caaaattaat ttgcgtaaaa agcgcgtcct cgtatatgct ccgatcaagc
      781 acattatttt gatccgttaa cgcagcttta atactacgaa agcgggtatt taaaaaatat
      841 atttgtaagg caaaagccca tctttttggg tcttcataaa acatttcaag gatgcggtta
      901 tccttaatgc tttcataaaa tgcctttgtt ccgagttcat ttgcgattag ctctgtatag
      961 ctacttttcc cagcaccaat cattcctgct aaaacaatca ctttatttcc tactccttcc
     1021 ataacatgag tagcctcctt ttttggtcga ctatctgttc attatactac taatttgctt
     1081 aataaggaga ttttttgtac gataaaagag aagaaatgag ggataaccat gacaaaacca
     1141 ttaaagctag tttataccga aaatgggttt gacacaggaa gttttttaat cgatgacaaa
     1201 ctgaccgaat attcaccagc ggatttgatg ttaatgtcta ttgccagttg tagcgccatt
     1261 gtttttcgta acattttaaa gaaaaaacga gtaaacttta ccgacttatg ggtagacgcc
     1321 acaatggaac gcatcccaga agaagaaaat cgtataagcg cgatacatct tcattttaaa
     1381 ataaccggtg ctgccttgga tccaaaagca cttgaaaaag cattaaaatt aacaccgaaa
     1441 tactgttcga tggttcgttc tgtcgaaaaa agcatccttg tcgatgaaag tcttgaaatc
     1501 atgccataaa ctactgacaa gctgctgttt ttttgttagt attaatgaag acttggaatg
     1561 atggaggaaa ataatgaatc aaaatccagt agaagaagga caaaaattcc cgctaactat
     1621 tcggcgcatg ggaatcaacg gggaaggaat cggctacttt aaaaaagcag ttgtatttgt
     1681 acctggcgca attaccggtg aagaagtagt tgtcgaagcg gtcaaagttc gtgatcgttt
     1741 caccgaagca aaattaaata aaattcgtaa aaaatctcca aaccgagtta ccgcaccttg
     1801 cccagtttac gaggcgtgtg gtggttgcca gttgcaacat gtggcctata gcgcccaact
     1861 tgaactaaaa agagatattg ttattcaatc aatcgaaaaa catacaaaaa tcgatccaac
     1921 caaattaaaa atccgcccaa caatcggaat ggaagaccca tggcgttacc gtaataaaag
     1981 ccaattccaa acaagaatgg taggcagtgg tcaagtcgaa acagggcttt tcggtgccaa
     2041 ttctcaccaa cttgttccaa ttgaagattg tatcgtccaa caacccgtta ccatcaaagt
     2101 aacgaatttt gttcgcgact tactagaaaa atacggcgtg ccaatttatg atgaaaaagc
     2161 tggcagtggt atcgtccgaa ctatcgtcgt tcgtactggc gtgaaaaccg gcgaaacaca
     2221 gctcgtcttc attacaaata gtaaaaagtt acctaaaaaa cgcgaaatgc ttgcagaaat
     2281 cgaagcagct cttccggaag tcacttcgat tatgcaaaac gtgaatcaag caaaatcctc
     2341 acttattttc ggtgacgaaa cgttcctttt agcaggaaaa gaaagcattg aagagaaatt
     2401 aatggaacta gaattcgatc tatctgctcg tgcctttttc caattaaacc cgttccaaac
     2461 agagcgactt tatcaagaag tcgaaaaagc actcgtacta acaggcagtg aaacactagt
     2521 agatgcttat tgcggtgttg gaacaatcgg ccaagctttt gccggaaaag taaaagaagt
     2581 tcgtggtatg gatattattc cagaatccat tgaagacgct aaacgaaacg ccgagaagaa
     2641 tggcatcgaa aatgtttatt atgaagttgg gaaagcagaa gacgtattac caaaatgggt
     2701 aaatgaaggt ttccgcccag acgcagtcat cgttgaccca ccaagaagcg gctgtgacca
     2761 aggcctaata aaatcattac tagatgtgga agcaaaacaa cttgtttatg tatcctgtaa
     2821 tccatccaca ttagcacgtg acttagcttt actcgcgaag aaatatcgca ttcgctatat
     2881 gcaacccgtc gatatgttcc cgcaaacagc tcacgtggaa accgtagtac tcttgcagtt
     2941 aaaagataaa taaaggactg gtggtacatg atttcaggat taagccatat cactttaatt
     3001 gtgaaagatt tgaataaaac aactgctttc ttacagaata tttttaatgc agaagaaatc
     3061 tattctagtg gcgacaaaac attttcgctt tccaaagaaa aattttttct aatagctggt
     3121 ttgtggattt gcattatgga aggagattct ttacaagagc gaacttacaa tcatattgct
     3181 ttccaaattc aatccgagga agtggatgaa tatactgagc ggattaaagc tctcggtgtg
     3241 gaaatgaaac cagaacgtcc cagagtccaa ggtgaaggac gttccattta tttttatgat
     3301 tttgataatc atctgtttga attacacgct ggtacattag aagaacgctt aaaaaggtat
     3361 cacgaataga aataacacct aataggagga aacaaacatg aaaaaactat ttgatgaaac
     3421 gaatgaattt gaagcaaagt actaccgaac tatttggtac ggctacatcg acaatgaatt
     3481 cgcgccagaa ttaagtgatg aaataaaaca actcattcaa agcgacctta cagaaaaaac
     3541 agcaaatcca atcgaagcaa ctcactgggt tttttatagc gaaacccaag caggggacgc
     3601 aattggtgat aaagtccgct cttccattat ggttcgccac cgggataata agtttgtcgt
     3661 ccattacaac gtgagcgatt tccaatttgt tactgtattt gatgtggcaa ccgcctttaa
     3721 agaccaatta gaacaagcat tgaatgcgta aataaaaaat cccgtctatt tttatagacg
     3781 ggattttcgt tcatccaagt tctttccagt gccaattacc aatatgtaaa ccttggttca
     3841 tttcactaga tgtaaaacta tcggctctag cttctgtttt tgctcgtgtt aatgaagtcg
     3901 cacttccaaa actatttgcg gtttcataat ggtattcttg gttgttcaaa cggataataa
     3961 tggcacgacc agaaggatgt tttccaataa gtttcaaggt ttcttcgctc cttttttcag
     4021 tcggttaaat catttttgtg aaagcaccgg cattttgatc caaggcagta gaggcagatt
     4081 caatttggct aaagtcttct aaagataaaa taagcacttc ttggctttcc tcgacttttg
     4141 cttcgacacg ttccgtacca cttgagatag tattaatttc ttgcgtgata ccgttgacac
     4201 ttttttccac ttctttaatt gcttcttcta cacgactcga aagtttacga acttcttccg
     4261 ctacaacact aaatccacgt ccggcgtcac cagcacgtgc tgcctcaatc gctgcattta
     4321 aggcaagtaa attagtctga gaagcaatac cgttaattgt attaataatg ccgtgaatat
     4381 tttgggcttc tgtttgcaaa tcgtgaagtg tatcggtatt ttcattggat tctttcgtga
     4441 ttgatttcac gagttcaagg agagcttcac tgcgcgtttt tccaacactg gaatgttctt
     4501 ttaaatttgt agccatgctt tttaaaccag atgcaaagtc atgaaccgtt tcttctcttc
     4561 tcgtaatatc tgtagcgatt ttggctactc caacgaccgt atcttcacgt ataatcggga
     4621 tataagtcgc ttcaaaccaa acacgttcac cgcgtgcatt ttttcgttca attttatttt
     4681 gaaatttttg cccagcaagc aaatttgtcc acattgcttt atagcttgca ctttggacaa
     4741 aatcaggaaa gcataagtcc gggtgggata aagtcaacat ttcttcttct gagtatccca
     4801 ttgcctccgc gaaaagggca ttagcataag ttactttttt attagtatca aaacgaa
//
LOCUS       DASDYO010000299         3656 bp    DNA     linear   BCT 08-DEC-2023
DEFINITION  TPA_asm: Listeria monocytogenes strain ST6 isolate YA00088306-LMO
            SAMN38563179-rid20482473.guided.182, whole genome shotgun sequence.
ACCESSION   DASDYO010000299 DASDYO010000000
VERSION     DASDYO010000299.1
DBLINK      BioProject: PRJNA514245
            BioSample: SAMN38563179
            Sequence Read Archive: SRR27013237
KEYWORDS    WGS; Third Party Data; TPA; TPA:assembly.
SOURCE      Listeria monocytogenes
  ORGANISM  Listeria monocytogenes
            Bacteria; Bacillota; Bacilli; Bacillales; Listeriaceae; Listeria.
REFERENCE   1  (bases 1 to 3656)
  AUTHORS   Souvorov,A., Agarwala,R. and Lipman,D.J.
  TITLE     SKESA: strategic k-mer extension for scrupulous assemblies
  JOURNAL   Genome Biol 19 (1), 153 (2018)
   PUBMED   30286803
  REMARK    Publication Status: Online-Only
REFERENCE   2  (bases 1 to 3656)
  CONSRTM   NCBI Pathogen Detection Project
  TITLE     Direct Submission
  JOURNAL   Submitted (06-DEC-2023) National Center for Biotechnology
            Information, National Library of Medicine, National Institutes of
            Health, Bldg 45, Center Drive, Bethesda, MD, USA
COMMENT     The annotation was added by the assembly submitters using the NCBI
            Prokaryotic Genome Annotation Pipeline (PGAP). Information about
            stand-alone PGAP can be found here: https://github.com/ncbi/pgap/
            This draft WGS assembly was generated by running SKESA to generate
            a de-novo assembly. The de-novo assembly was then concatenated with
            contigs generated using a guided assembler using antimicrobial
            resistance genes as baits to comprehensively catalog the set of
            resistance genes in the isolate. Note, some parts of the contigs
            derived from the guided assembler may overlap de-novo contigs, and
            other guided assembler contigs. De-novo contigs can be
            differentiated from guided assembler contigs by their names , which
            include either 'denovo' or 'guided'.
            
            ##Genome-Assembly-Data-START##
            Assembly Date         :: 06-DEC-2023
            Assembly Method       :: SKESA v. 2.2
            Assembly Name         :: PDT002014418.1
            Long Assembly Name    :: NCBI Pathogen Detection Assembly
                                     PDT002014418.1
            Genome Coverage       :: 140x
            Sequencing Technology :: ILLUMINA
            ##Genome-Assembly-Data-END##
            
            ##Genome-Annotation-Data-START##
            Annotation Date                   :: 12/06/2023 13:32:24
            Annotation Method                 :: Best-placed reference protein
                                                 set; GeneMarkS-2+
            Annotation Pipeline               :: NCBI Prokaryotic Genome
                                                 Annotation Pipeline (PGAP)
            Annotation Provider               :: NCBI
            Features Annotated                :: Gene; CDS; rRNA; tRNA; ncRNA;
                                                 repeat_region
            Annotation Software revision      :: 2021-01-11.build5132
            Genes (total)                     :: 3,091
            CDSs (total)                      :: 3,039
            Genes (coding)                    :: 3,023
            CDSs (with protein)               :: 3,023
            Genes (RNA)                       :: 52
            rRNAs                             :: 1, 2, 3 (5S, 16S, 23S)
            partial rRNAs                     :: 1, 2, 3 (5S, 16S, 23S)
            tRNAs                             :: 42
            ncRNAs                            :: 4
            Pseudo Genes (total)              :: 16
            CDSs (without protein)            :: 16
            Pseudo Genes (ambiguous residues) :: 0 of 16
            Pseudo Genes (frameshifted)       :: 8 of 16
            Pseudo Genes (incomplete)         :: 6 of 16
            Pseudo Genes (internal stop)      :: 3 of 16
            Pseudo Genes (multiple problems)  :: 1 of 16
            ##Genome-Annotation-Data-END##
FEATURES             Location/Qualifiers
     source          1..3656
                     /organism="Listeria monocytogenes"
                     /mol_type="genomic DNA"
                     /submitter_seqid="SAMN38563179-rid20482473.guided.182"
                     /strain="ST6"
                     /serotype="4b"
                     /isolate="YA00088306-LMO"
                     /host="Homo sapiens"
                     /db_xref="taxon:1639"
                     /country="South Africa: Gauteng"
                     /collection_date="2018"
                     /note="genotype: 6"
     gene            <1..1574
                     /locus_tag="U0290_003089"
     CDS             <1..1574
                     /locus_tag="U0290_003089"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464444.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=3
                     /transl_table=11
                     /product="BglG family transcription antiterminator"
                     /protein_id="HEM2303092.1"
                     /translation="KDIQQLKNELKEADVQIVTSKDRIKLIGKERAKRKYMISLLYEE
                     GGYRESIKSRIQEMIEFVSIDKLQNIVKEVLTEESITTNQYSMMNIVLHYAISIVRIQ
                     QGNTLIETQKTLIRKHSKEYEISKKIAKILSEEYQIHFSEAETKQLGLLYVGLQNEQS
                     ANANHGELDQFVDKKIIEALKSVLANVEETYLIDLQNEQLFIKLAIHVQSLYYRSRYK
                     AYTRNLSLLDIKTSYPVTFDIAVYISSLLQEKLAIDFNEDEISFIALHIGSFLESENR
                     DYIRLEIGLLIEDYHDLRTNMLKKLRARFENEATIKLIENEDSEENFDIILTTNRDIA
                     LEKAGSIFIHPLLTTKDIKKISNRIQTKKKILENHLRGQQIDRYIVRSLYANQIDPSE
                     LTPAKIREQMISKMEKQTFVTPEFKEKVEKRERMAPTSFPSGIAIPHSIKNDALQSGV
                     SIMTLQEPIYWNDVKIKIIALVAISKKDATEFNDFFEKFVEIVSEPINTKRLSMAESF
                     EEFIQKLKMMMEESE"
     gene            1867..3438
                     /gene="abc-f"
                     /locus_tag="U0290_003090"
     CDS             1867..3438
                     /gene="abc-f"
                     /locus_tag="U0290_003090"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464445.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="ABC-F type ribosomal protection protein"
                     /protein_id="HEM2303093.1"
                     /translation="MSTIEINQLKIEVADRVLVEIPHLLVSKKARIGIIGQNGLGKTT
                     LMEVIAGAKEATSGTVTTQGKLAYIKQLSTDTSTKSGGEKTRKAIQHAMRQNPSVLLA
                     DEPTSNLDVESVKHLERQWSDFHGALIIISHDRTFLDALCTEIWEIKNQKIHVYKGNY
                     HAYLEQKQQQENQAELVYKEFKNKKQQLQASQTHHEIEAGRIVKPGKRLNNKEASAFK
                     AGKGTQQKKQHSTIKALEKRIERLGNVEKPHTTKPIKMITPDNRVIKKGNTILSVKET
                     TYEIAGRKLFETKAFSIKAGDKVALIGENASGKTTFLKEIIQENPNLLCNPQAKIAYF
                     DQELNGLNQTKSLLENISEISVQTKQVNREVLGSMHFKESDLHKEVRMLSGGERVKLL
                     LSMLLVSDANFLILDEPTNYLDIYAMEALETLIKQFAGTVLFVSHDRTFVNHVAEQLL
                     VIENNEMTFHRMTFAEYEESKAPSRITEEDKLILEMRMSEIAAKLMQPNLKPTEKAML
                     EQDYQEIITKRQQFS"
     gene            3560..>3656
                     /locus_tag="U0290_003091"
     CDS             3560..>3656
                     /locus_tag="U0290_003091"
                     /inference="COORDINATES: similar to AA
                     sequence:RefSeq:NP_464446.1"
                     /note="Derived by automated computational analysis using
                     gene prediction method: Protein Homology."
                     /codon_start=1
                     /transl_table=11
                     /product="permease"
                     /protein_id="HEM2303094.1"
                     /translation="MFSHLPDSFLQMNTIFISILIEALPFVLIGVF"
BASE COUNT         1394 a          716 c          640 g          906 t
ORIGIN      
        1 aaaaagacat ccaacaatta aaaaacgaac taaaagaagc cgatgtccaa atcgtcacca
       61 gtaaagaccg aatcaaatta atcggaaaag aacgtgccaa acgaaaatat atgatttcct
      121 tgctatatga agaaggcgga taccgtgaaa gtatcaaaag tcgcattcaa gaaatgattg
      181 aatttgtttc tatcgataaa ctgcaaaaca tcgtaaaaga agttttaacg gaagaatcca
      241 ttacaaccaa tcaatattcg atgatgaaca ttgtcttaca ttacgccatt agcatcgtcc
      301 gaattcaaca aggaaataca ctcattgaaa cccaaaaaac actcatccga aaacactcca
      361 aagaatacga aatatcgaaa aaaattgcta aaattctctc ggaagaatac caaatccatt
      421 tttcagaggc agagacaaaa caactcggac ttttatatgt tggcttgcaa aatgaacaat
      481 ctgctaatgc caatcatggc gaactggacc aatttgtcga taaaaaaatc atcgaagcac
      541 ttaaaagcgt gctcgccaat gtggaagaaa cctatctcat cgatctccaa aatgagcaac
      601 tttttatcaa gctagcgatt cacgtccaaa gcctatacta tcgctcacgt tacaaagcgt
      661 acaccagaaa tttaagctta cttgatatta aaacgtctta cccagtaact tttgatattg
      721 ctgtttacat ttcttctttg ctacaagaaa aactagcgat tgactttaac gaagatgaaa
      781 tttcttttat cgcgctgcat atcggctctt ttctagaaag tgaaaaccga gattatattc
      841 gcttagaaat aggcctactt attgaggatt atcacgattt aagaacaaat atgctgaaaa
      901 aactgcgcgc acgatttgaa aatgaagcta ccatcaaact gatagaaaac gaggactctg
      961 aagaaaattt tgatatcatt ttaacaacaa accgagatat tgctcttgaa aaagcgggtt
     1021 ccatttttat tcatccctta ctaacgacga aggatatcaa gaaaatcagc aatcgaatcc
     1081 aaacaaagaa aaaaatcttg gaaaatcact tgcgaggtca acaaattgat cgctacatcg
     1141 ttcgttccct ctacgccaac caaattgacc cctcagaact gacacccgca aaaatcagag
     1201 agcaaatgat ttctaaaatg gaaaaacaaa ccttcgtcac gccggaattt aaagaaaaag
     1261 tcgaaaaaag ggaacgaatg gcgccaacaa gcttcccatc cggcattgct ataccacatt
     1321 ctatcaagaa tgatgccctt caaagtggtg tatctataat gacgctacaa gagccgattt
     1381 attggaatga cgtcaaaata aaaataattg ctctcgtcgc catcagcaaa aaagatgcaa
     1441 cagagttcaa tgattttttt gaaaagtttg tagaaatcgt ctccgaaccg attaatacta
     1501 aacgtttatc aatggccgaa agtttcgagg agttcatcca aaaactaaaa atgatgatgg
     1561 aagaaagtga gtaaatggcc acacataagc cgtgtaattc tatttacacg gcttataaag
     1621 gttgaagtga cgataaaatt acgctataat ataaccatca aacgaaaagg agtgttatct
     1681 taagccaatg aaattctaat cctgtattat atgaaaaaat gaagaaagct atccaattct
     1741 cggatagaaa ctattttttc ggacgggatt cgtatgttca tttcgcatga taactctttg
     1801 ctacaggcct ttttttggcg tagcctcgcg gattcctctc tgaaaatatt caggaggtta
     1861 ttttttatgt ctacaatcga aataaatcaa ttaaaaatag aagtagcaga tagagtttta
     1921 gtagaaattc ctcatctgct agttagtaaa aaagcaagaa tcggcatcat cggtcaaaat
     1981 ggtctaggaa aaacaacgct aatggaagtg attgctggcg ctaaagaagc aacatctggc
     2041 acggtgacta cccaaggaaa acttgcttac atcaaacaac tttccactga tacaagtacg
     2101 aaaagcggcg gcgaaaaaac aagaaaagca attcaacatg cgatgcgcca aaacccaagt
     2161 gttctcctag cagatgaacc gacaagcaac ctcgatgtcg aaagcgtcaa acatttagaa
     2221 cgtcagtgga gcgatttcca cggtgcgctc ataattatat cgcatgaccg taccttttta
     2281 gatgcacttt gtacagaaat atgggaaatc aaaaaccaaa aaattcacgt atacaaagga
     2341 aactaccacg cgtatttaga acaaaaacaa caacaagaaa accaagcgga actcgtatac
     2401 aaagaattta aaaacaaaaa gcaacaacta caagcctccc aaacacacca tgaaatcgaa
     2461 gcaggtcgca ttgtcaaacc tggaaaacgc ctaaacaaca aagaagccag cgcgtttaaa
     2521 gccggaaaag gcacacaaca aaagaaacaa cacagtacca tcaaagcttt agaaaaacga
     2581 attgaacggc tcggcaatgt cgaaaaacca catacaacta aaccaatcaa aatgatcacc
     2641 ccagacaatc gcgtcataaa aaaaggtaat acgatactaa gtgtcaaaga aacaacctac
     2701 gagatcgcag gacgaaaact atttgaaaca aaagcttttt ctattaaagc aggggataaa
     2761 gtggcgctaa tcggtgaaaa tgcgagcggg aaaactacat ttttaaaaga aataatccaa
     2821 gaaaatccta atctcctatg taatccccaa gcgaaaattg cttatttcga ccaagaattg
     2881 aatggattaa accaaacgaa atccctgtta gaaaacatct cggaaattag cgttcaaacc
     2941 aagcaagtaa acagagaagt actaggtagc atgcatttta aagaaagcga tttgcataag
     3001 gaagtgcgca tgctctctgg cggggaacga gtgaagttgc tgctcagtat gctcctcgtt
     3061 agtgacgcca atttcttgat tcttgatgaa ccaaccaact atttggatat ctatgcaatg
     3121 gaagcgctgg aaacgttaat caaacaattt gcggggacag tactattcgt ttcgcatgat
     3181 agaacttttg ttaaccacgt ggcagaacaa ttactcgtca tcgaaaataa tgaaatgact
     3241 ttccaccgga tgactttcgc ggaatatgaa gaaagtaaag cgccaagtcg catcacagaa
     3301 gaagataagt tgattttaga aatgcgcatg tcagaaattg cagccaagct tatgcaaccg
     3361 aatttaaagc ccacagaaaa agccatgctc gaacaagatt atcaagaaat tatcacaaaa
     3421 agacaacaat ttagttaaat tgttgtcttt ttattcaagc taaataaaaa atatagtcat
     3481 ttatatttta cttgatttct gcaaaagata ggcttagaat caaatagtta ttaaaaagag
     3541 taaagaaaga aggaatccca tgtttagtca tcttccggat tcattcctcc aaatgaatac
     3601 catttttatt tctattttga ttgaggcact gccgtttgta ttaattggag tattta
//
